Citrus Sinensis ID: 024417
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 268 | ||||||
| 225432384 | 343 | PREDICTED: uncharacterized protein LOC10 | 0.809 | 0.632 | 0.755 | 1e-95 | |
| 449466191 | 341 | PREDICTED: uncharacterized protein LOC10 | 0.944 | 0.741 | 0.632 | 9e-94 | |
| 224100351 | 304 | predicted protein [Populus trichocarpa] | 0.772 | 0.680 | 0.756 | 2e-92 | |
| 255551645 | 287 | conserved hypothetical protein [Ricinus | 0.75 | 0.700 | 0.787 | 2e-91 | |
| 297736912 | 410 | unnamed protein product [Vitis vinifera] | 0.809 | 0.529 | 0.727 | 7e-91 | |
| 356512227 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.906 | 0.688 | 0.648 | 1e-87 | |
| 356524994 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.906 | 0.688 | 0.636 | 6e-85 | |
| 297827493 | 344 | hypothetical protein ARALYDRAFT_903150 [ | 0.951 | 0.741 | 0.625 | 1e-83 | |
| 145360782 | 351 | Rossmann-fold NAD(P)-binding domain-cont | 0.787 | 0.601 | 0.715 | 4e-83 | |
| 51970960 | 351 | unnamed protein product [Arabidopsis tha | 0.787 | 0.601 | 0.715 | 4e-83 |
| >gi|225432384|ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251108 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 164/217 (75%), Positives = 187/217 (86%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 42 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 101
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPSR+ DYP DVRL
Sbjct: 102 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVRL 161
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +LEFGGCV
Sbjct: 162 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKGVLEFGGCV 221
Query: 225 LRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
LRLAGLYKADRGAHVYWL+KGTV++RPDHILNLIHYE
Sbjct: 222 LRLAGLYKADRGAHVYWLKKGTVEARPDHILNLIHYE 258
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449466191|ref|XP_004150810.1| PREDICTED: uncharacterized protein LOC101221257 [Cucumis sativus] gi|449496699|ref|XP_004160201.1| PREDICTED: uncharacterized protein LOC101225299 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 348 bits (894), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 167/264 (63%), Positives = 204/264 (77%), Gaps = 11/264 (4%)
Query: 1 MGTISCTNTVSLNGACTRF---FAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMAT 57
M I+ ++ + RF F +D L+S S F+ R + + P MA
Sbjct: 1 MEVITSFSSCKFHAKLPRFSTSFFSDHLASTTRSSFYPAR-FNYRRLPF-------KMAA 52
Query: 58 NFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117
QV+ASS+IGA E+ + +SSG G +DLLI+GPGVLGRLVA++WR+EHPGC+++GQT
Sbjct: 53 PLQVSASSTIGASDEKLETSSSGFTGAHDLLIIGPGVLGRLVAQKWREEHPGCEVHGQTF 112
Query: 118 TADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLF 177
TADHH+ELI +GI PSLK + ++FPYVIFCAPPSRS DYPGDVRLA SW+GEG+FLF
Sbjct: 113 TADHHEELIQLGIQPSLKGGDVGRRFPYVIFCAPPSRSPDYPGDVRLAGSSWDGEGTFLF 172
Query: 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGA 237
TSSSA YDC+DNG CDEDSPV+PIGRSPRTD+LLK+EK+++EFGGCVLRLAGLYKADRGA
Sbjct: 173 TSSSAPYDCNDNGPCDEDSPVMPIGRSPRTDLLLKSEKIVIEFGGCVLRLAGLYKADRGA 232
Query: 238 HVYWLQKGTVDSRPDHILNLIHYE 261
H YWL+KGTVD RPDHILNLIHYE
Sbjct: 233 HSYWLEKGTVDVRPDHILNLIHYE 256
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100351|ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|222851663|gb|EEE89210.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 183/218 (83%), Gaps = 11/218 (5%)
Query: 55 MATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG 114
MA QV+A S+IGA EE ASSG VGENDLLIVGPGVLGRLVAE+WRQEHPGCQ+YG
Sbjct: 1 MAAPLQVSAFSTIGARNEELGTASSGLVGENDLLIVGPGVLGRLVAEKWRQEHPGCQVYG 60
Query: 115 QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGS 174
QT+T DHHDELI MGI PSLK T+ATQ++PYVIFCAPPSR+ DYPGDVR AALSWNG+GS
Sbjct: 61 QTVTTDHHDELIKMGINPSLKGTKATQQYPYVIFCAPPSRTSDYPGDVREAALSWNGDGS 120
Query: 175 FLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKA- 233
F+FTSSSA YDC DNG C+EDSPVVPIGRSPRTDVLLKAEKV+LE GGC +RLAGLY +
Sbjct: 121 FVFTSSSAPYDCFDNGQCNEDSPVVPIGRSPRTDVLLKAEKVVLESGGCAIRLAGLYISF 180
Query: 234 ----------DRGAHVYWLQKGTVDSRPDHILNLIHYE 261
+RGAH YWL+KGTV+ RPDHILNLIHYE
Sbjct: 181 SVLNYVDFINNRGAHAYWLEKGTVEVRPDHILNLIHYE 218
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551645|ref|XP_002516868.1| conserved hypothetical protein [Ricinus communis] gi|223543956|gb|EEF45482.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 341 bits (874), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 175/207 (84%), Gaps = 6/207 (2%)
Query: 55 MATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG 114
MA FQV+ASS++GA EE SS VGENDLLIVGPGVLGRLVAE+WRQEHPGCQ+YG
Sbjct: 1 MANPFQVSASSTMGATNEELDAVSSSLVGENDLLIVGPGVLGRLVAEKWRQEHPGCQVYG 60
Query: 115 QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGS 174
QT+T DHHDELI +GI PSLK T+ +FPYVIFCAPPSR+ DYPGDVR AALSWNGEGS
Sbjct: 61 QTLTTDHHDELIKIGINPSLKGTKPIHQFPYVIFCAPPSRTSDYPGDVREAALSWNGEGS 120
Query: 175 FLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKAD 234
FLFTSSSA YDC DNG CDEDSPVVPIGRSPRTDVLLKAEKV+LE GCV YKAD
Sbjct: 121 FLFTSSSAPYDCYDNGDCDEDSPVVPIGRSPRTDVLLKAEKVVLESDGCV------YKAD 174
Query: 235 RGAHVYWLQKGTVDSRPDHILNLIHYE 261
RGAHVYWLQKG V+ RPDHILNLIHYE
Sbjct: 175 RGAHVYWLQKGIVEVRPDHILNLIHYE 201
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736912|emb|CBI26113.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 184/220 (83%), Gaps = 3/220 (1%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 106 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 165
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPSR+ DYP DVRL
Sbjct: 166 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVRL 225
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +LEFGGCV
Sbjct: 226 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKGVLEFGGCV 285
Query: 225 LRLAGLY---KADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
LRLAGLY + GAHVYWL+KGTV++RPDHILNLIHYE
Sbjct: 286 LRLAGLYISFQILEGAHVYWLKKGTVEARPDHILNLIHYE 325
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512227|ref|XP_003524822.1| PREDICTED: uncharacterized protein LOC100804718 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/253 (64%), Positives = 191/253 (75%), Gaps = 10/253 (3%)
Query: 9 TVSLNGACTRFFAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMATNFQVTASSSIG 68
T+ N C RF ++S NR +KL +S S S AT+ +V+ ++
Sbjct: 25 TLCDNFRCLRFLTPKPPHLRSSHSKLGNR---VKL-----TSFSMSKATHLKVSQAALSS 76
Query: 69 AVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128
+ +GE+DLLIVGPGVLGRLVA++W QE PG Q+YGQT+T DHH+ELI M
Sbjct: 77 TEESLSSSPRV--IGEHDLLIVGPGVLGRLVAQKWSQELPGSQVYGQTVTTDHHNELIQM 134
Query: 129 GITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSD 188
GI PSLKWTEAT KFP VI+CAPPSR+ DY G++RLAALSWNGEGSFLFTSSSA YDC+D
Sbjct: 135 GINPSLKWTEATHKFPNVIYCAPPSRTPDYAGNIRLAALSWNGEGSFLFTSSSAPYDCND 194
Query: 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGAHVYWLQKGTVD 248
NG CDEDSPVVPIGRSPR DVLLKAE V+LEFGGCV+RLAGLYKADRGAH Y+L+KG VD
Sbjct: 195 NGPCDEDSPVVPIGRSPRVDVLLKAENVVLEFGGCVVRLAGLYKADRGAHNYFLEKGVVD 254
Query: 249 SRPDHILNLIHYE 261
SRPDHILNLIHYE
Sbjct: 255 SRPDHILNLIHYE 267
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524994|ref|XP_003531112.1| PREDICTED: uncharacterized protein LOC100776260 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 319 bits (818), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 161/253 (63%), Positives = 186/253 (73%), Gaps = 10/253 (3%)
Query: 9 TVSLNGACTRFFAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMATNFQVTASSSIG 68
T+ N C RF ++S NR A +S SM+ Q+ S
Sbjct: 25 TLCDNVRCLRFLTPKPPHLRSSHSNLGNR----------AQLTSFSMSKATQLKVSQDAL 74
Query: 69 AVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128
+ E+ +S +GE+DLLIVGPGVLGRLVA++WRQE PG Q+YGQT++ DHH+ELI M
Sbjct: 75 SSTEQSLSSSPRVIGEHDLLIVGPGVLGRLVAQKWRQEIPGSQVYGQTVSTDHHNELIQM 134
Query: 129 GITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSD 188
GI PS KWTEAT FP VI+CAPPSR+ DY G+VRLAALSWNGEGSFLFTSSSA YDC+D
Sbjct: 135 GINPSKKWTEATHTFPNVIYCAPPSRTPDYAGNVRLAALSWNGEGSFLFTSSSAPYDCND 194
Query: 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGAHVYWLQKGTVD 248
NG CDEDSPVVPIGRSP DVLLKAE V+LEFGGCVLRLAGLYKADRGAH Y+L+K VD
Sbjct: 195 NGPCDEDSPVVPIGRSPGVDVLLKAENVVLEFGGCVLRLAGLYKADRGAHNYYLEKRIVD 254
Query: 249 SRPDHILNLIHYE 261
SRPDH+LNLIHYE
Sbjct: 255 SRPDHVLNLIHYE 267
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297827493|ref|XP_002881629.1| hypothetical protein ARALYDRAFT_903150 [Arabidopsis lyrata subsp. lyrata] gi|297327468|gb|EFH57888.1| hypothetical protein ARALYDRAFT_903150 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/264 (62%), Positives = 189/264 (71%), Gaps = 9/264 (3%)
Query: 1 MGTISCTNTVSLNGAC--TRFFAADSLSSKASSVFFNNRTWKLKLRP-LVASSSSSSMAT 57
MG ISC + + N T F+ S S + S+ F R + K + S+SS MAT
Sbjct: 1 MGFISCISYPTTNSKILSTHHFSKQSTSPSSFSLKFALRREEDKPKSSFFLPSTSSKMAT 60
Query: 58 NFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117
Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP CQI GQT+
Sbjct: 61 PIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPECQIVGQTV 120
Query: 118 TADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLF 177
T +HHDEL +GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WNGEGSFLF
Sbjct: 121 TTNHHDELEKLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLF 180
Query: 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGA 237
TSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRL RGA
Sbjct: 181 TSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLT------RGA 234
Query: 238 HVYWLQKGTVDSRPDHILNLIHYE 261
H YWL KGTVD+RPDHILNLIHYE
Sbjct: 235 HTYWLSKGTVDARPDHILNLIHYE 258
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|145360782|ref|NP_181441.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|17473602|gb|AAL38267.1| unknown protein [Arabidopsis thaliana] gi|21386945|gb|AAM47876.1| unknown protein [Arabidopsis thaliana] gi|330254538|gb|AEC09632.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 170/211 (80%)
Query: 51 SSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC 110
+SS MAT Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP
Sbjct: 55 TSSLMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPES 114
Query: 111 QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWN 170
QI+GQT+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WN
Sbjct: 115 QIFGQTVTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWN 174
Query: 171 GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGL 230
GEGSFLFTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGL
Sbjct: 175 GEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGL 234
Query: 231 YKADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
Y RGAH YWL K T+D+RPDHILNLIHYE
Sbjct: 235 YTETRGAHTYWLSKETIDARPDHILNLIHYE 265
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51970960|dbj|BAD44172.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 313 bits (803), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 170/211 (80%)
Query: 51 SSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC 110
+SS MAT Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP
Sbjct: 55 TSSLMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPES 114
Query: 111 QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWN 170
QI+GQT+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WN
Sbjct: 115 QIFGQTVTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWN 174
Query: 171 GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGL 230
GEGSFLFTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGL
Sbjct: 175 GEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGL 234
Query: 231 YKADRGAHVYWLQKGTVDSRPDHILNLIHYE 261
Y RGAH YWL K T+D+RPDHILNLIHYE
Sbjct: 235 YTETRGAHTYWLSKETIDARPDHILNLIHYE 265
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 268 | ||||||
| TAIR|locus:2065001 | 351 | EMB2799 "EMBRYO DEFECTIVE 2799 | 0.973 | 0.743 | 0.618 | 1.2e-79 | |
| UNIPROTKB|Q88BE7 | 282 | PSPTO_0070 "Uncharacterized pr | 0.619 | 0.588 | 0.290 | 0.00072 |
| TAIR|locus:2065001 EMB2799 "EMBRYO DEFECTIVE 2799" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
Identities = 164/265 (61%), Positives = 191/265 (72%)
Query: 1 MGTISCTNTVSLNGAC--TRFFAADSLSSKAS-SVFFNNRTWKLKLR-PLVAXXXXXXMA 56
MG ISC + ++N T F+ S S+ +S S+ F R + K + MA
Sbjct: 1 MGFISCISFPTINSRILSTHHFSKHSTSASSSYSLKFALRRQEDKPKVSFFLPLTSSLMA 60
Query: 57 TNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116
T Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP QI+GQT
Sbjct: 61 TPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPESQIFGQT 120
Query: 117 MTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFL 176
+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WNGEGSFL
Sbjct: 121 VTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFL 180
Query: 177 FTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRG 236
FTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGLY RG
Sbjct: 181 FTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLYTETRG 240
Query: 237 AHVYWLQKGTVDSRPDHILNLIHYE 261
AH YWL K T+D+RPDHILNLIHYE
Sbjct: 241 AHTYWLSKETIDARPDHILNLIHYE 265
|
|
| UNIPROTKB|Q88BE7 PSPTO_0070 "Uncharacterized protein" [Pseudomonas syringae pv. tomato str. DC3000 (taxid:223283)] | Back alignment and assigned GO terms |
|---|
Score = 110 (43.8 bits), Expect = 0.00072, P = 0.00072
Identities = 56/193 (29%), Positives = 87/193 (45%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
LLI G G +G +A + Q H G ++G T + +G+ L + ++P
Sbjct: 6 LLIAGCGDIGSRLATRL-QPH-GWVVHGLRRTVSELPAGV-IGVEGDLFEAQRPAQWPTA 62
Query: 145 ---YVIFCAPPSRSLDYPGDVRLA-------ALSW---NGEGS--FLFTSSSAIYDCSDN 189
YV++CA PS+ D G R+A LSW G+ +F SSS +Y +
Sbjct: 63 ALDYVVYCATPSQR-DETG-YRMAYVEGLRNVLSWLEQTGQQPKRLIFVSSSGVYGQQNG 120
Query: 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKG-T 246
DE+S P G + V+L+AE++ L G +RL G+Y R +++G +
Sbjct: 121 EWVDENSATEPGGYTGT--VMLEAEQLALNSGLPATAVRLTGIYGPGRSDLSNRVRQGHS 178
Query: 247 VDSRPDHILNLIH 259
V P N IH
Sbjct: 179 VRVDPPVYANRIH 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 268 262 0.00091 114 3 11 22 0.47 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 614 (65 KB)
Total size of DFA: 220 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.84u 0.30s 20.14t Elapsed: 00:00:01
Total cpu time: 19.84u 0.30s 20.14t Elapsed: 00:00:01
Start: Fri May 10 05:47:12 2013 End: Fri May 10 05:47:13 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | estExt_Genewise1_v1.C_LG_VIII2645 | hypothetical protein (304 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 268 | |||
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 1e-17 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 1e-17
Identities = 49/188 (26%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----SLKWTEATQK 142
+LI+G G LG+ +A Q + G Q+ G T + + G+TP +
Sbjct: 1 VLILGCGYLGQRLARQLLAQ--GWQVTGTTRSPEKLAADRPAGVTPLAADLTQPGLL-AD 57
Query: 143 FPYVIFCAPPSRSLDYPG-DVRLAAL-----SWNGEGSFLFTSSSAIY-DCSDNGAC-DE 194
+++ PP G D L AL ++ SS+ +Y D G DE
Sbjct: 58 VDHLVISLPPPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ--QGEWVDE 115
Query: 195 DSPVVPIGRSPRTDVLLKAEKVILEFGG---CVLRLAGLYKADRGAHVYWLQKGTVDSRP 251
SP P + LL+AE+ +L G +LRLAG+Y R Q
Sbjct: 116 TSPPNP--STESGRALLEAEQALLALGSKPTTILRLAGIYGPGRHPLRRLAQGTGRPPAG 173
Query: 252 DHILNLIH 259
+ N IH
Sbjct: 174 NAPTNRIH 181
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Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 268 | |||
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.95 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.94 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.93 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.93 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.93 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.92 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.92 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.92 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.91 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.91 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.91 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.91 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.91 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.91 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.9 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.9 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.9 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.9 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.9 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.89 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.89 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.89 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.89 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.89 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.88 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.88 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.88 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.88 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.88 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.87 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.87 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.87 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.86 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.86 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.86 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.86 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.86 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.86 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.86 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.85 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.85 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.84 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.84 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.84 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.84 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.84 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.82 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.82 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.81 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.81 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.79 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.78 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.75 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.75 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.73 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.73 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.67 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.67 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.66 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.63 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.63 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.62 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.6 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.59 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.54 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.5 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.48 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.47 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.47 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.45 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.44 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.44 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.42 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.42 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.39 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.38 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.37 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.34 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.33 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.32 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.3 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.3 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.29 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.29 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.27 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.27 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.27 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.25 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.24 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.23 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.23 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.23 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.22 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.22 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.21 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.2 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.2 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.2 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.19 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.18 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.18 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.18 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.17 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.16 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.16 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.15 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.15 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.15 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.14 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.13 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.09 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.09 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.08 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.06 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.05 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.05 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.04 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.03 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.02 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.02 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.01 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.0 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.99 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.99 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.99 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.99 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.98 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.97 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.97 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.96 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.96 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.95 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.93 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.91 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.9 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.9 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.89 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.89 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.89 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.88 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.88 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.86 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.86 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.86 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.86 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.84 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.84 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.82 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.81 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.81 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.81 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.8 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.8 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.79 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.78 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.78 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.76 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.75 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.75 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.73 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.73 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.71 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.7 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.69 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.63 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.61 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.55 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.55 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 98.55 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.52 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.5 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.5 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.47 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.42 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.4 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.4 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.38 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.35 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.35 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.34 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.33 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.33 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.32 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.31 | |
| PLN00015 | 308 | protochlorophyllide reductase | 98.28 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.28 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.27 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.25 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.19 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.18 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.17 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.16 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.15 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.15 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.15 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.13 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 98.11 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.11 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.06 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.06 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 98.05 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.03 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.01 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.99 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.96 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.95 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.93 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.93 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.93 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.9 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.9 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.88 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.87 | |
| PLN00106 | 323 | malate dehydrogenase | 97.83 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.79 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.77 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.76 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.74 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.74 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 97.72 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.72 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.7 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.7 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.68 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.68 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.67 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.66 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.64 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 97.64 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.63 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.61 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.61 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.61 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.59 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.59 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.58 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.58 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.58 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.57 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.56 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.56 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.56 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.55 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 97.54 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.54 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.53 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.53 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.53 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.52 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 97.52 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.52 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.49 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.49 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.47 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.46 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.45 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.45 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.44 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 97.44 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.4 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.39 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 97.38 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.37 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.37 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.35 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.35 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.34 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.34 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.34 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.33 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 97.32 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.32 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.32 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.26 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.26 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.25 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.24 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.24 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 97.23 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.23 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.22 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 97.22 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.21 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.19 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 97.19 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.14 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.14 | |
| COG0677 | 436 | WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas | 97.14 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 97.14 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 97.13 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.13 | |
| PLN02256 | 304 | arogenate dehydrogenase | 97.12 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.11 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 97.1 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.1 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 97.08 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 97.04 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.04 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 97.03 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 97.02 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.02 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 97.02 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.01 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.01 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 97.01 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.99 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.99 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.98 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.96 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.95 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.94 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 96.93 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.93 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.92 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 96.92 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.91 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.9 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.9 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 96.89 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.89 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.88 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.88 | |
| COG1893 | 307 | ApbA Ketopantoate reductase [Coenzyme metabolism] | 96.85 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 96.85 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.85 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.82 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.82 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.82 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.81 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.81 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.79 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.78 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.77 | |
| PLN02712 | 667 | arogenate dehydrogenase | 96.77 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.77 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 96.77 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.76 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.75 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.75 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 96.74 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.74 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 96.74 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.73 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 96.72 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.72 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.71 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.69 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.69 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.67 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.67 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.67 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 96.63 | |
| PLN02494 | 477 | adenosylhomocysteinase | 96.61 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 96.58 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.57 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.56 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.56 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.55 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 96.54 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.53 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.53 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.52 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.5 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.48 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 96.48 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.46 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.45 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 96.44 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.44 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.41 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.41 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.41 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 96.4 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.39 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.39 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.39 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.37 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.37 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 96.36 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.34 | |
| PRK01390 | 460 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.33 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 96.33 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.33 | |
| PRK00421 | 461 | murC UDP-N-acetylmuramate--L-alanine ligase; Provi | 96.32 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.32 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 96.32 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.32 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 96.31 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.3 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.3 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.28 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 96.28 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.27 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.27 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.25 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 96.23 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.23 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.2 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 96.19 | |
| PTZ00431 | 260 | pyrroline carboxylate reductase; Provisional | 96.18 | |
| PRK00683 | 418 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.18 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 96.18 | |
| PRK12439 | 341 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.17 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 96.15 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.13 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.13 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 96.12 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.09 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.09 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.08 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.08 | |
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 96.07 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 96.06 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 96.05 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 96.05 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 96.04 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.03 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 96.02 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 95.97 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.96 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 95.9 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.8 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 95.78 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 95.76 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 95.75 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.75 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 95.74 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.69 |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=212.66 Aligned_cols=181 Identities=15% Similarity=0.069 Sum_probs=134.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc-------CCceeeccCc-------cccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-------MGITPSLKWT-------EATQKF 143 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~-------~~i~~~~~D~-------~~~~~~ 143 (268)
.||+|||||+ ||||++|+++|+++ |++|++++|....... +.. ..++.+.+|. +.++++
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 4689999996 99999999999999 9999999986432211 100 1344555664 246789
Q ss_pred CEEEEccCCCCC----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHH
Q 024417 144 PYVIFCAPPSRS----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (268)
Q Consensus 144 D~Vi~~a~~~~~----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK 210 (268)
|+|||+|+.... .+ .+.++.+++ +++.++++|||+||.+|||...+.+..|+++..|. ++|+.+|
T Consensus 92 d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~--~~Y~~sK 169 (348)
T PRK15181 92 DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPL--SPYAVTK 169 (348)
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCC--ChhhHHH
Confidence 999999985332 11 234555665 24568999999999999997555667788777776 7999999
Q ss_pred HHHHHHHHHc----C--ceEEEeCceecCCCcH----------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 211 LKAEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 211 ~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
..+|++++.+ + ++++||+++|||+..+ +...+..|+. ++.|.+.++|+|++|+|+++
T Consensus 170 ~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~ 245 (348)
T PRK15181 170 YVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN 245 (348)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence 9999988754 2 7999999999996421 1223444543 46788999999999999985
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-26 Score=198.73 Aligned_cols=179 Identities=18% Similarity=0.201 Sum_probs=135.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCc---c------ccCCCCEEEEccCCC
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT---E------ATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~---~------~~~~~D~Vi~~a~~~ 153 (268)
|+||||| +||||+|.+.+|++. |++|+++|.-... .+.+....++++.+|. + .-.++|+|||.|+..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 5899997 699999999999999 9999999985433 3333322256676765 1 235899999999976
Q ss_pred CCCC--------h---HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024417 154 RSLD--------Y---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 154 ~~~~--------~---~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
..++ | +.++.+++ +.+.++++|||.||..|||.+..-|++|+.|+.|. ++||++|+..|++|+.+
T Consensus 79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~--NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPI--NPYGRSKLMSEEILRDA 156 (329)
T ss_pred ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCC--CcchhHHHHHHHHHHHH
Confidence 5432 2 33444554 35789999999999999999877899999999998 99999999999999876
Q ss_pred C------ceEEEeCceecCCCc-----------HHHH---HHHcCCc-----------cCCCCcccCcccHhhHhhcc
Q 024417 221 G------GCVLRLAGLYKADRG-----------AHVY---WLQKGTV-----------DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ~------~tIlRp~~vyG~~~~-----------~~~~---~l~~g~~-----------~~~g~~~~~~Ihv~DlA~ai 267 (268)
. .++||..++-|.... .+.. ....|+. ..+|...++||||.|+|+|-
T Consensus 157 ~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH 234 (329)
T COG1087 157 AKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAH 234 (329)
T ss_pred HHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHH
Confidence 3 699999999887432 1111 2222331 24678999999999999873
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-25 Score=198.20 Aligned_cols=178 Identities=21% Similarity=0.235 Sum_probs=132.7
Q ss_pred EEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcch--hhhcCCce-eeccCc-------cccCCCCEEEEccCCCC
Q 024417 88 LIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD--ELINMGIT-PSLKWT-------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 88 LI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~--~l~~~~i~-~~~~D~-------~~~~~~D~Vi~~a~~~~ 154 (268)
||||+ ||||++|+++|+++ | ++|+++++.+.... .+...+.. .+.+|. ++++++|+|||+|++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~--g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLER--GYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHC--CCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence 57885 99999999999999 8 79999998764422 23333433 666664 37899999999998643
Q ss_pred C-C-C--------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC-C-C--CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024417 155 S-L-D--------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-N-G--ACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 155 ~-~-~--------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~-~-~--~~~E~~~~~p~~~~~y~~sK~~aE~~l~ 218 (268)
. . . .++++++++ +.+.++++|||+||.+++++.. + . ..+|+.|..+...+.|+++|..+|++++
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 2 1 1 356778877 3567999999999999997621 2 2 2467777655445789999999999998
Q ss_pred HcC-----------ceEEEeCceecCCCcHH----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 219 EFG-----------GCVLRLAGLYKADRGAH----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 219 ~~~-----------~tIlRp~~vyG~~~~~~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++. +++|||+.||||+...+ ...+..|.. ++.++...+++|++|+|.|.
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ah 225 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAH 225 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHH
Confidence 763 58999999999986432 223445532 56777889999999999975
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5e-25 Score=205.17 Aligned_cols=183 Identities=13% Similarity=0.037 Sum_probs=126.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc-------CCceeeccCc-------cccCCCCE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-------MGITPSLKWT-------EATQKFPY 145 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~-------~~~~~~D~ 145 (268)
...|+|||||+ ||||++|+++|+++ | ++|++++|..++...+.. .+++++.+|. +++.++|+
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~--~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ 89 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTE--TPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADL 89 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhc--CCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCE
Confidence 34578999996 99999999999997 5 899999987655443321 2466666664 25678999
Q ss_pred EEEccCCCCC----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC------------
Q 024417 146 VIFCAPPSRS----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP------------ 200 (268)
Q Consensus 146 Vi~~a~~~~~----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p------------ 200 (268)
|||||+.... .+ .+.+..+++ +++.+ ++|||+||..+||...+.+++|+.|..+
T Consensus 90 ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 90 TINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 9999985321 11 111223333 13344 8999999999999654344455443211
Q ss_pred --------CCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-------------HH----HHHHcCCc--
Q 024417 201 --------IGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------------HV----YWLQKGTV-- 247 (268)
Q Consensus 201 --------~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-------------~~----~~l~~g~~-- 247 (268)
...+.|+.+|+.+|++++.+ + ++++||+++|||+... +. ..+.+++.
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK 248 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence 11257999999999999864 2 7999999999996421 11 12334443
Q ss_pred -cCCCCcccCcccHhhHhhcc
Q 024417 248 -DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 248 -~~~g~~~~~~Ihv~DlA~ai 267 (268)
++.+++.++|||++|+|+++
T Consensus 249 ~~g~g~~~r~~i~V~Dva~ai 269 (386)
T PLN02427 249 LVDGGQSQRTFVYIKDAIEAV 269 (386)
T ss_pred EECCCCceECcEeHHHHHHHH
Confidence 45677889999999999986
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-25 Score=201.25 Aligned_cols=182 Identities=13% Similarity=0.130 Sum_probs=129.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc--------cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT--------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~--------~~~~~~D~Vi~~a~~~ 153 (268)
||+|||||+ ||||++|+++|+++ .|++|++++|+.++...+. ..+++++.+|. +.++++|+|||+|+..
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~-~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~ 79 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILET-TDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIA 79 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhC-CCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence 678999997 99999999999985 1699999998765443332 23566666664 1457899999999753
Q ss_pred CC----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC---C--CCCCHHHHHHHHHHH
Q 024417 154 RS----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV---P--IGRSPRTDVLLKAEK 215 (268)
Q Consensus 154 ~~----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~---p--~~~~~y~~sK~~aE~ 215 (268)
.. .+ .+.++.+++ +++.+ ++|||+||..+||...+.+++|+.++. | .+.+.|+.+|..+|+
T Consensus 80 ~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~ 158 (347)
T PRK11908 80 TPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDR 158 (347)
T ss_pred ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHH
Confidence 21 11 133444554 23445 899999999999975555677665321 1 112689999999999
Q ss_pred HHHHc----C--ceEEEeCceecCCCcH--------------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 216 VILEF----G--GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 216 ~l~~~----~--~tIlRp~~vyG~~~~~--------------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++.+ + ++++||+.+|||+... +..++..|.. .+.|++.++|||++|+|+++
T Consensus 159 ~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~ 233 (347)
T PRK11908 159 VIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDAL 233 (347)
T ss_pred HHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHH
Confidence 99764 2 7999999999997421 1223444553 35678999999999999886
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=204.04 Aligned_cols=178 Identities=13% Similarity=0.070 Sum_probs=127.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhh---h-cCCceeeccCc--cccCCCCEEEEccCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDEL---I-NMGITPSLKWT--EATQKFPYVIFCAPPSRS- 155 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l---~-~~~i~~~~~D~--~~~~~~D~Vi~~a~~~~~- 155 (268)
|||||||+ ||||++|+++|+++ |++|++++|.... .+.+ . ...++.+..|. +.+.++|+|||||+....
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~D~ViHlAa~~~~~ 198 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPILLEVDQIYHLACPASPV 198 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccccccCCCEEEECceeccch
Confidence 68999996 99999999999999 9999999985322 1111 1 12345555554 356789999999985321
Q ss_pred ---CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHH
Q 024417 156 ---LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 156 ---~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~-----~~~p~~~~~y~~sK~~aE~~l~ 218 (268)
.+ .+.++.+++ +++.+ .+|||+||.+|||.....+.+|+. |..|. +.|+.+|+.+|++++
T Consensus 199 ~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~--s~Yg~SK~~aE~~~~ 275 (436)
T PLN02166 199 HYKYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER--SCYDEGKRTAETLAM 275 (436)
T ss_pred hhccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCCC--CchHHHHHHHHHHHH
Confidence 11 233445555 23445 489999999999976555777773 44454 789999999999987
Q ss_pred Hc----C--ceEEEeCceecCCCc----H----HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 219 EF----G--GCVLRLAGLYKADRG----A----HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 219 ~~----~--~tIlRp~~vyG~~~~----~----~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+ + ++++||+++|||+.. . +...+.+++. ++++++.++|||++|+|+++
T Consensus 276 ~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai 341 (436)
T PLN02166 276 DYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGL 341 (436)
T ss_pred HHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence 65 2 799999999999732 1 1223344443 46778899999999999986
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.5e-24 Score=196.04 Aligned_cols=182 Identities=14% Similarity=0.071 Sum_probs=129.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-----hhhc--CCceeeccCc-------cccCCCCEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----ELIN--MGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-----~l~~--~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
++++|||||+ ||||++|+++|+++ |++|++++|+.++.. .+.. ..++.+.+|. ++++++|+||
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 4678999997 99999999999999 999999999765421 1111 1355555664 2567899999
Q ss_pred EccCCCCCCC------hHHHHHHHH--HHhcCCCeEEEEccC-eeecCCCC---CCCCCCCC------CCCCCCCHHHHH
Q 024417 148 FCAPPSRSLD------YPGDVRLAA--LSWNGEGSFLFTSSS-AIYDCSDN---GACDEDSP------VVPIGRSPRTDV 209 (268)
Q Consensus 148 ~~a~~~~~~~------~~~~~~~~~--~~~~gvkr~V~~SS~-~vYg~~~~---~~~~E~~~------~~p~~~~~y~~s 209 (268)
|+|++...+. .+.++.+++ +.+.++++|||+||. ++||.... .+++|+++ ..|. +.|+.+
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~--~~Y~~s 164 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTK--NWYCYG 164 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccc--cHHHHH
Confidence 9999754321 234455555 245689999999996 69975322 35788853 2233 689999
Q ss_pred HHHHHHHHHHc----C--ceEEEeCceecCCCcH-----H--HHHHHcCCccCCCCcccCcccHhhHhhccC
Q 024417 210 LLKAEKVILEF----G--GCVLRLAGLYKADRGA-----H--VYWLQKGTVDSRPDHILNLIHYELPSRLQC 268 (268)
Q Consensus 210 K~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-----~--~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai~ 268 (268)
|+.+|++++.+ + ++++||+++|||+... . ...+..|.....+++.++|||++|+|++++
T Consensus 165 K~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~ 236 (342)
T PLN02214 165 KMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHV 236 (342)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHH
Confidence 99999999765 3 7999999999997531 1 112234444334567889999999999863
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-25 Score=188.49 Aligned_cols=177 Identities=21% Similarity=0.287 Sum_probs=135.7
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc-------cccC--CCCEEEEccCCCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-------EATQ--KFPYVIFCAPPSRS 155 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~-------~~~~--~~D~Vi~~a~~~~~ 155 (268)
|||+|+ ||||++|+++|+++ |++|+.+.|.......... .+++.+..|. +.++ ++|+|||+|+....
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~ 78 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN 78 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccc
Confidence 799996 99999999999999 9999999998765533222 2666666654 1333 56999999997531
Q ss_pred ----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 156 ----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 156 ----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
.. .+....+++ +++.+++++||+||..+|+...+.+++|+++..|. ++|+.+|+.+|++++++.
T Consensus 79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~--~~Y~~~K~~~e~~~~~~~~ 156 (236)
T PF01370_consen 79 PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPL--SPYGASKRAAEELLRDYAK 156 (236)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHS--SHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccc
Confidence 01 122333444 24567899999999999998866789999998776 899999999999998763
Q ss_pred -----ceEEEeCceecCC---Cc------HHHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 222 -----GCVLRLAGLYKAD---RG------AHVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -----~tIlRp~~vyG~~---~~------~~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+|||+ .. .+...+.+|+. ++.+++.++|+|++|+|+++
T Consensus 157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 219 (236)
T PF01370_consen 157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAI 219 (236)
T ss_dssp HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHH
Confidence 7999999999998 21 12334566763 57889999999999999986
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=199.26 Aligned_cols=184 Identities=11% Similarity=0.029 Sum_probs=125.1
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-----------------hhhh------cCCceeec
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----------------DELI------NMGITPSL 134 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-----------------~~l~------~~~i~~~~ 134 (268)
|...+||+|||||+ ||||++|+++|+++ |++|++++|..... +.+. ..+++++.
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 34556789999996 99999999999999 99999987531100 0110 12466666
Q ss_pred cCc---c----ccC--CCCEEEEccCCCCCC-------C-------hHHHHHHHH--HHhcCCC-eEEEEccCeeecCCC
Q 024417 135 KWT---E----ATQ--KFPYVIFCAPPSRSL-------D-------YPGDVRLAA--LSWNGEG-SFLFTSSSAIYDCSD 188 (268)
Q Consensus 135 ~D~---~----~~~--~~D~Vi~~a~~~~~~-------~-------~~~~~~~~~--~~~~gvk-r~V~~SS~~vYg~~~ 188 (268)
+|. + .++ ++|+|||+|+..... + .+.++.+++ ++..+++ +|||+||..|||...
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~ 199 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN 199 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence 664 1 333 589999999653211 0 122333444 2345775 999999999998642
Q ss_pred CCCCC-----------CCC---CCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-----------
Q 024417 189 NGACD-----------EDS---PVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----------- 237 (268)
Q Consensus 189 ~~~~~-----------E~~---~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----------- 237 (268)
.+++ |++ +..|. ++|+.+|.++|.+++.+ + ++++||+++|||++..
T Consensus 200 -~~~~E~~i~~~~~~~e~~~~~~~~P~--s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~ 276 (442)
T PLN02572 200 -IDIEEGYITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRL 276 (442)
T ss_pred -CCCcccccccccccccccccCCCCCC--CcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCccccccccccccc
Confidence 1222 232 34454 78999999999988765 3 7999999999997421
Q ss_pred --------H----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 238 --------H----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 238 --------~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ...+..|+. ++.|++.++|||++|+|+++
T Consensus 277 ~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~ 321 (442)
T PLN02572 277 DYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCI 321 (442)
T ss_pred CcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHH
Confidence 1 112334553 46789999999999999986
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.3e-23 Score=195.38 Aligned_cols=174 Identities=21% Similarity=0.216 Sum_probs=132.6
Q ss_pred CCCCCeEEEE----cc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-----------hhhcCCceeeccCcc----c-
Q 024417 81 GVGENDLLIV----GP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMGITPSLKWTE----A- 139 (268)
Q Consensus 81 ~~~m~kVLI~----Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-----------~l~~~~i~~~~~D~~----~- 139 (268)
..++++|||+ |+ ||||++|+++|+++ ||+|++++|+..... .+...+++.+.+|.. .
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~ 126 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV 126 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh
Confidence 3456789999 96 99999999999999 999999999865422 222346777777762 2
Q ss_pred -cCCCCEEEEccCCCCCCChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 024417 140 -TQKFPYVIFCAPPSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (268)
Q Consensus 140 -~~~~D~Vi~~a~~~~~~~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~ 216 (268)
..++|+|||+++.. .+..++++ +++.|++||||+||.++|+.....+..|+++..|. . +|+++|++
T Consensus 127 ~~~~~d~Vi~~~~~~-----~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~--~----sK~~~E~~ 195 (378)
T PLN00016 127 AGAGFDVVYDNNGKD-----LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPK--A----GHLEVEAY 195 (378)
T ss_pred ccCCccEEEeCCCCC-----HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCc--c----hHHHHHHH
Confidence 25799999997642 33455554 24579999999999999997655678888877664 2 69999999
Q ss_pred HHHcC--ceEEEeCceecCCCc-----HHHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 217 ILEFG--GCVLRLAGLYKADRG-----AHVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 217 l~~~~--~tIlRp~~vyG~~~~-----~~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++.+ ++++||+++||++.. ++..++..+.. ++.+++.++|+|++|+|+++
T Consensus 196 l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai 256 (378)
T PLN00016 196 LQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMF 256 (378)
T ss_pred HHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHH
Confidence 98876 899999999999643 22334555553 35678899999999999886
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-23 Score=194.69 Aligned_cols=180 Identities=15% Similarity=0.069 Sum_probs=127.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~ 155 (268)
.|+|||+|+ ||||++|+++|+++ ||+|++++|.............+++.+|. +.+.++|+|||+|+....
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~ 98 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGG 98 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCC
Confidence 468999996 99999999999999 99999999864321110111245555564 135789999999975321
Q ss_pred -----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCC----CCCCCCC--CCCCCCCCHHHHHHHHHHH
Q 024417 156 -----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDN----GACDEDS--PVVPIGRSPRTDVLLKAEK 215 (268)
Q Consensus 156 -----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~----~~~~E~~--~~~p~~~~~y~~sK~~aE~ 215 (268)
.+ ......+++ +++.++++|||+||..+||.... .++.|++ |..|. +.|+.+|.++|+
T Consensus 99 ~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~--s~Yg~sK~~~E~ 176 (370)
T PLN02695 99 MGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQ--DAYGLEKLATEE 176 (370)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCC--CHHHHHHHHHHH
Confidence 11 123344454 24568999999999999986432 1366665 55665 799999999999
Q ss_pred HHHHc----C--ceEEEeCceecCCCcH----------HHHHHHc-CC-c--cCCCCcccCcccHhhHhhcc
Q 024417 216 VILEF----G--GCVLRLAGLYKADRGA----------HVYWLQK-GT-V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 216 ~l~~~----~--~tIlRp~~vyG~~~~~----------~~~~l~~-g~-~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++.+ + ++++||+++|||+..+ +...+.+ +. + ++.+++.++|||++|+++++
T Consensus 177 ~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai 248 (370)
T PLN02695 177 LCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGV 248 (370)
T ss_pred HHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHH
Confidence 88664 3 7999999999996421 1222222 23 2 47789999999999999986
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=207.69 Aligned_cols=183 Identities=15% Similarity=0.134 Sum_probs=131.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc--------cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT--------EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~--------~~~~~~D~Vi~~a~~ 152 (268)
++|+|||||+ ||||++|+++|+++ .||+|++++|.......+. ..+++.+.+|. ++++++|+|||+|+.
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~-~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~ 392 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRD-DNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI 392 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhC-CCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence 4679999996 99999999999984 1699999999765433222 23566666664 135799999999985
Q ss_pred CCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC---CCC--CCCHHHHHHHHHH
Q 024417 153 SRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VPI--GRSPRTDVLLKAE 214 (268)
Q Consensus 153 ~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~---~p~--~~~~y~~sK~~aE 214 (268)
.... + ...+..+++ +++.+ ++|||+||..+||...+.+++|+++. .|. ..+.|+.+|+.+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E 471 (660)
T PRK08125 393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD 471 (660)
T ss_pred cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence 4321 1 123344444 23455 89999999999997555578888753 221 1257999999999
Q ss_pred HHHHHc----C--ceEEEeCceecCCCcH--------------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 215 KVILEF----G--GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 215 ~~l~~~----~--~tIlRp~~vyG~~~~~--------------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++.+ + .+++||+++|||+... +...+..+.. ++.+++.++|||++|+|+++
T Consensus 472 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a~ 547 (660)
T PRK08125 472 RVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEAL 547 (660)
T ss_pred HHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHHH
Confidence 999765 2 6999999999997421 1223344543 46788999999999999985
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-23 Score=185.99 Aligned_cols=177 Identities=21% Similarity=0.235 Sum_probs=130.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCC-CEEEEccCCCCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKF-PYVIFCAPPSRSL 156 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~-D~Vi~~a~~~~~~ 156 (268)
+|||||+ ||||++|+++|+++ ||+|++++|...+..... .+++.+.+|. +...++ |+|||+|+.....
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~ 78 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVP 78 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchh
Confidence 4999996 99999999999999 999999999766654332 3444444442 244566 9999999865321
Q ss_pred C------------hHHHHHHHH--HHhcCCCeEEEEccCeeecCC-CCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHc
Q 024417 157 D------------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDED-SPVVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 157 ~------------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~-~~~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
. ++.++++++ +++.++++|||+||.++|+.. .+.+++|+ .+..|. ++|+.+|+++|+.++++
T Consensus 79 ~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~--~~Yg~sK~~~E~~~~~~ 156 (314)
T COG0451 79 DSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL--NPYGVSKLAAEQLLRAY 156 (314)
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC--CHHHHHHHHHHHHHHHH
Confidence 0 234455555 234689999999998888754 33478999 677776 58999999999999876
Q ss_pred C------ceEEEeCceecCCCcH-----HH----HHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 221 G------GCVLRLAGLYKADRGA-----HV----YWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ~------~tIlRp~~vyG~~~~~-----~~----~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ++++||+++|||+... .. .++.++.. .+.+...++++|++|+++++
T Consensus 157 ~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 222 (314)
T COG0451 157 ARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADAL 222 (314)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHH
Confidence 4 7999999999998542 11 12444542 24567778999999999875
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=197.62 Aligned_cols=179 Identities=12% Similarity=0.056 Sum_probs=126.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hh----hhcCCceeeccCc--cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DE----LINMGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~----l~~~~i~~~~~D~--~~~~~~D~Vi~~a~~~~~ 155 (268)
.|||||||+ ||||++|+++|+++ |++|++++|..... +. +...+++.+..|. +.+.++|+|||+|+....
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~l~~~D~ViHlAa~~~~ 196 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPILLEVDQIYHLACPASP 196 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhhhhccCCceEEEECCccChhhcCCCEEEEeeeecch
Confidence 368999996 99999999999999 99999998753221 11 1123455555554 356789999999985321
Q ss_pred ----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC-----CCCCCCCCHHHHHHHHHHHHH
Q 024417 156 ----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEKVI 217 (268)
Q Consensus 156 ----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~-----~~~p~~~~~y~~sK~~aE~~l 217 (268)
.+ .+.+..+++ +++.++ +|||+||..|||.....+.+|+. |..+. +.|+.+|..+|+++
T Consensus 197 ~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~--s~Y~~SK~~aE~~~ 273 (442)
T PLN02206 197 VHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVR--SCYDEGKRTAETLT 273 (442)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCcc--chHHHHHHHHHHHH
Confidence 11 133344554 234564 89999999999875555677764 33333 78999999999998
Q ss_pred HHc----C--ceEEEeCceecCCCc----H----HHHHHHcCC-c--cCCCCcccCcccHhhHhhcc
Q 024417 218 LEF----G--GCVLRLAGLYKADRG----A----HVYWLQKGT-V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 218 ~~~----~--~tIlRp~~vyG~~~~----~----~~~~l~~g~-~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+ + ++++||+++|||+.. . +...+.+++ + ++.+++.++|+|++|+|+++
T Consensus 274 ~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai 340 (442)
T PLN02206 274 MDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGL 340 (442)
T ss_pred HHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHH
Confidence 764 3 799999999999631 1 112233443 2 46788899999999999986
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.8e-23 Score=184.83 Aligned_cols=169 Identities=11% Similarity=0.118 Sum_probs=118.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc----ccC--CCCEEEEccCCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRSL- 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~----~~~--~~D~Vi~~a~~~~~~- 156 (268)
|||||||+ ||||++|+++|+++ | +|++++|..... .....|.+ .++ ++|+|||||+....+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~~~~--------~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~ 69 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHSTDY--------CGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDK 69 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc--C-CEEEeccccccc--------cCCCCCHHHHHHHHHhcCCCEEEECCccCCcch
Confidence 48999996 99999999999999 8 799998854211 01112222 233 689999999875432
Q ss_pred ---C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--c
Q 024417 157 ---D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (268)
Q Consensus 157 ---~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~ 222 (268)
+ +..+..+++ +++.+ .+|||+||..|||.....+++|++++.|. +.|+++|+++|++++.+. +
T Consensus 70 ~~~~~~~~~~~N~~~~~~l~~aa~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~--~~Yg~sK~~~E~~~~~~~~~~ 146 (299)
T PRK09987 70 AESEPEFAQLLNATSVEAIAKAANEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPL--NVYGETKLAGEKALQEHCAKH 146 (299)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEccceEECCCCCCCcCCCCCCCCC--CHHHHHHHHHHHHHHHhCCCE
Confidence 1 123344554 23456 48999999999987656689999998887 899999999999998875 7
Q ss_pred eEEEeCceecCCCcHHH----HHHHcCCc---cCC--CCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRGAHV----YWLQKGTV---DSR--PDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~----~~l~~g~~---~~~--g~~~~~~Ihv~DlA~ai 267 (268)
+|+|++++|||+...+. ..+.+++. +++ +.+.+.+.+.+|+++++
T Consensus 147 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~ 200 (299)
T PRK09987 147 LIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAI 200 (299)
T ss_pred EEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHH
Confidence 99999999999653222 23344543 222 34444556667776653
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-22 Score=185.36 Aligned_cols=182 Identities=15% Similarity=0.090 Sum_probs=122.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh------hhc-CCceeeccCc-------cccCCCCEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE------LIN-MGITPSLKWT-------EATQKFPYV 146 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~------l~~-~~i~~~~~D~-------~~~~~~D~V 146 (268)
+++++|||||+ ||||++|+++|+++ |++|+++.|+.+.... +.. ..++.+.+|. +.++++|+|
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 84 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLV 84 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEE
Confidence 34678999996 99999999999999 9999999987654321 111 1355666664 246789999
Q ss_pred EEccCCCCC--CC--------hHHHHHHHHH--Hh-cCCCeEEEEccCeeecCCC----CCCCCCCC---------CCCC
Q 024417 147 IFCAPPSRS--LD--------YPGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSD----NGACDEDS---------PVVP 200 (268)
Q Consensus 147 i~~a~~~~~--~~--------~~~~~~~~~~--~~-~gvkr~V~~SS~~vYg~~~----~~~~~E~~---------~~~p 200 (268)
||+|++... .+ .+.++.+++. .+ .++++|||+||..+|+... +.+++|+. +..|
T Consensus 85 ih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p 164 (338)
T PLN00198 85 FHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP 164 (338)
T ss_pred EEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc
Confidence 999986421 11 1223334442 23 3589999999999998431 23455542 2224
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-------HHHHHHcCCc--c-C-CC----CcccCccc
Q 024417 201 IGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTV--D-S-RP----DHILNLIH 259 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-------~~~~l~~g~~--~-~-~g----~~~~~~Ih 259 (268)
. ++|+.+|+.+|++++.+ + .+++||+++|||+... ....+..++. + + .+ +..++|||
T Consensus 165 ~--~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 242 (338)
T PLN00198 165 T--WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITH 242 (338)
T ss_pred c--chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcceeE
Confidence 3 68999999999988764 3 7999999999997421 1112334432 1 2 12 22479999
Q ss_pred HhhHhhcc
Q 024417 260 YELPSRLQ 267 (268)
Q Consensus 260 v~DlA~ai 267 (268)
++|+|+++
T Consensus 243 V~D~a~a~ 250 (338)
T PLN00198 243 VEDVCRAH 250 (338)
T ss_pred HHHHHHHH
Confidence 99999986
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=187.10 Aligned_cols=180 Identities=13% Similarity=0.055 Sum_probs=125.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEE-EeCCCCc--chhhhc----CCceeeccCc---c----ccC--CCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADH--HDELIN----MGITPSLKWT---E----ATQ--KFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~-~~R~~~~--~~~l~~----~~i~~~~~D~---~----~~~--~~D~V 146 (268)
|++|||||+ ||||++|+++|+++ |++|++ ++|.... ...+.. ..++.+.+|. + .++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 679999996 99999999999999 987654 4443221 111111 1344555554 1 333 49999
Q ss_pred EEccCCCCCC----C-------hHHHHHHHHH--Hh---------cCCCeEEEEccCeeecCCC--CCCCCCCCCCCCCC
Q 024417 147 IFCAPPSRSL----D-------YPGDVRLAAL--SW---------NGEGSFLFTSSSAIYDCSD--NGACDEDSPVVPIG 202 (268)
Q Consensus 147 i~~a~~~~~~----~-------~~~~~~~~~~--~~---------~gvkr~V~~SS~~vYg~~~--~~~~~E~~~~~p~~ 202 (268)
||+|+..... + ...++.+++. .+ .++++|||+||..+||... ..+++|+.+..|.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~- 157 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS- 157 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC-
Confidence 9999864321 1 1223334431 11 3578999999999998532 3468999887776
Q ss_pred CCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 203 RSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.|+.+|.++|++++.+ + ++++||+.+|||+..+ +..++.++.. ++.+++.++|+|++|+|+++
T Consensus 158 -s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~ 236 (355)
T PRK10217 158 -SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL 236 (355)
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHH
Confidence 89999999999988764 2 7999999999998631 1223344442 47789999999999999986
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-22 Score=184.00 Aligned_cols=180 Identities=14% Similarity=0.062 Sum_probs=125.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---hhh-----cCCceeeccCc-------cccCCCCEEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELI-----NMGITPSLKWT-------EATQKFPYVIF 148 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~l~-----~~~i~~~~~D~-------~~~~~~D~Vi~ 148 (268)
++|||||+ ||||++|+++|+++ |++|++++|+..... .+. ...++++.+|. ++++++|+|||
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 68999996 99999999999999 999999999765422 111 12455565654 25678999999
Q ss_pred ccCCCCC--CC--------hHHHHHHHHH--Hhc-CCCeEEEEccCe--eecCC---CCCCCCCCCCCCCC----CCCHH
Q 024417 149 CAPPSRS--LD--------YPGDVRLAAL--SWN-GEGSFLFTSSSA--IYDCS---DNGACDEDSPVVPI----GRSPR 206 (268)
Q Consensus 149 ~a~~~~~--~~--------~~~~~~~~~~--~~~-gvkr~V~~SS~~--vYg~~---~~~~~~E~~~~~p~----~~~~y 206 (268)
+|++... .+ .+.+..+++. ++. +++||||+||.+ +|+.. .+.+++|+.+..|. ..+.|
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 9986421 11 1334445542 334 789999999986 47532 22468888776552 12579
Q ss_pred HHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|..+|++++.+ + ++++||+.+|||+..+ ....+..|.. ..+++.++|||++|+|+++
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~a~ 235 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TFPNASYRWVDVRDVANAH 235 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cCCCCCcCeEEHHHHHHHH
Confidence 99999999988654 3 7999999999997431 1112333433 2356789999999999986
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-22 Score=186.56 Aligned_cols=179 Identities=18% Similarity=0.096 Sum_probs=128.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhh-------cCCceeeccCc---c----ccC--C
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGITPSLKWT---E----ATQ--K 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~-------~~~i~~~~~D~---~----~~~--~ 142 (268)
++|||||+ ||||++|+++|+++ |++|++++|.++. ...+. ..+++.+.+|. + .++ +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 48999996 99999999999999 9999999997542 11111 12456666664 1 344 5
Q ss_pred CCEEEEccCCCCCC----C--h-----HHHHHHHHH--HhcCC---CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 143 FPYVIFCAPPSRSL----D--Y-----PGDVRLAAL--SWNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~----~--~-----~~~~~~~~~--~~~gv---kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
+|+|||+|+..... . + ..+..+++. .+.++ ++|||+||..+||.....+++|+.++.|. ++|
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y 156 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR--SPY 156 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC--Chh
Confidence 79999999864321 1 1 123344441 33455 38999999999997555578999988887 899
Q ss_pred HHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-----H----HHHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-----H----VYWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-----~----~~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|.++|.+++.+ + .++.|+.++|||+... . ...+..|+. +++|++.++|||++|+|+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~ 236 (343)
T TIGR01472 157 AAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAM 236 (343)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHH
Confidence 99999999998765 3 5778999999986321 1 112344542 46788999999999999986
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-22 Score=184.54 Aligned_cols=180 Identities=17% Similarity=0.115 Sum_probs=127.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----h-cCCceeeccCc---c----ccC--CCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I-NMGITPSLKWT---E----ATQ--KFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~-~~~i~~~~~D~---~----~~~--~~D~Vi~ 148 (268)
.|+|||||+ ||||++++++|+++ |++|++++|+....... . ...++.+.+|. + .++ ++|+|||
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 468999996 99999999999999 99999999976543221 1 11344555554 1 233 5799999
Q ss_pred ccCCCCCC----Ch-------HHHHHHHH--HHhcC-CCeEEEEccCeeecCCCC-CCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 149 CAPPSRSL----DY-------PGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 149 ~a~~~~~~----~~-------~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~-~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
+|+..... +. ..+..+++ ++..+ +++|||+||..+|+.... .+++|+++..|. ++|+.+|..+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~--~~Y~~sK~~~ 159 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH--DPYSSSKACA 159 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCC--CcchhHHHHH
Confidence 99853221 11 12233333 12334 789999999999986432 367888887776 7899999999
Q ss_pred HHHHHHc-----------C--ceEEEeCceecCCCc---H----HHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF-----------G--GCVLRLAGLYKADRG---A----HVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~-----------~--~tIlRp~~vyG~~~~---~----~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|.+++.+ + ++++||+.+|||++. . +...+.+|+. ++.+++.++|||++|+|+++
T Consensus 160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~ 235 (349)
T TIGR02622 160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGY 235 (349)
T ss_pred HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHH
Confidence 9888653 3 689999999999641 1 1223445554 56788999999999999885
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=200.24 Aligned_cols=183 Identities=15% Similarity=0.195 Sum_probs=130.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC--Ccchhhh----cCCceeeccCc---c----c--cCCCCEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELI----NMGITPSLKWT---E----A--TQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~--~~~~~l~----~~~i~~~~~D~---~----~--~~~~D~V 146 (268)
++|+|||||+ ||||++|+++|+++.++++|++++|.. ++...+. ..+++++.+|. + . ..++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 3579999996 999999999999874468999998852 1222221 13566666664 1 1 2689999
Q ss_pred EEccCCCCCC----C-------hHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCCC---CCCCCCCCCCCCCHHHHH
Q 024417 147 IFCAPPSRSL----D-------YPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGA---CDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 147 i~~a~~~~~~----~-------~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~---~~E~~~~~p~~~~~y~~s 209 (268)
||+|+....+ + .+.++.+++ +++.+ +++|||+||..+||.....+ .+|+++..|. +.|+.+
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~--~~Y~~s 162 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPT--NPYSAT 162 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCC--CCcHHH
Confidence 9999975421 1 123344444 23445 89999999999999754322 3677777776 789999
Q ss_pred HHHHHHHHHHc----C--ceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+++|++++++ + ++|+||+++||+++.. +...+.+|.. .+.+++.++|||++|+|+++
T Consensus 163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~ 235 (668)
T PLN02260 163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAF 235 (668)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHH
Confidence 99999999764 2 7999999999997531 1223344543 46788899999999999986
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-22 Score=177.08 Aligned_cols=181 Identities=14% Similarity=0.078 Sum_probs=135.5
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCC-----CCcchhhhc-CCceeeccCc---c----ccC--CCCEEEE
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMT-----ADHHDELIN-MGITPSLKWT---E----ATQ--KFPYVIF 148 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~-----~~~~~~l~~-~~i~~~~~D~---~----~~~--~~D~Vi~ 148 (268)
|++|||| +||||+.+++++++++|..+|+.++.= .+....+.. ....++.+|. + .++ ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 5799997 699999999999999888889998862 222222332 2556666553 2 344 6999999
Q ss_pred ccCCCCCCC-------h----HHHHHHHHH--HhcCC-CeEEEEccCeeecCCC--CCCCCCCCCCCCCCCCHHHHHHHH
Q 024417 149 CAPPSRSLD-------Y----PGDVRLAAL--SWNGE-GSFLFTSSSAIYDCSD--NGACDEDSPVVPIGRSPRTDVLLK 212 (268)
Q Consensus 149 ~a~~~~~~~-------~----~~~~~~~~~--~~~gv-kr~V~~SS~~vYg~~~--~~~~~E~~~~~p~~~~~y~~sK~~ 212 (268)
.|+..+.+. | +-++.+++. ++... .||+++||..|||+-. +..++|++|+.|. +||+.+|+.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps--SPYSASKAa 158 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS--SPYSASKAA 158 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCC--CCcchhhhh
Confidence 999766432 2 334455552 33333 5999999999999743 3479999999998 999999999
Q ss_pred HHHHHHHcC------ceEEEeCceecCCCcH--H----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 213 AEKVILEFG------GCVLRLAGLYKADRGA--H----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 213 aE~~l~~~~------~tIlRp~~vyG~~~~~--~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++.+++.+. ++|.|+++-|||.+.+ + +..+..|++ .++|.+.++|+||+|-|+|+
T Consensus 159 sD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai 228 (340)
T COG1088 159 SDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAI 228 (340)
T ss_pred HHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHH
Confidence 999998874 6999999999998653 1 223445653 58899999999999999986
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.8e-22 Score=181.97 Aligned_cols=175 Identities=13% Similarity=0.112 Sum_probs=118.7
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----cc-----CCCCEEEEccCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----AT-----QKFPYVIFCAPP 152 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~-----~~~D~Vi~~a~~ 152 (268)
|||||+ ||||++|+++|+++ |++|+++.|+......... -.+....|. + .+ .++|+|||||+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 78 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVN-LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGAC 78 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchHHHh-hhhhhhhhhhhHHHHHHHHhcccccCCccEEEECcee
Confidence 789996 99999999999999 9987777665432111100 001111121 1 11 379999999974
Q ss_pred CCCC--C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 024417 153 SRSL--D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG 221 (268)
Q Consensus 153 ~~~~--~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~ 221 (268)
.... + ....+.+++ +.+.++ +|||+||.++||...+.+++|+.+..|. +.|+.+|..+|++++++.
T Consensus 79 ~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~ 155 (308)
T PRK11150 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL--NVYGYSKFLFDEYVRQIL 155 (308)
T ss_pred cCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC--CHHHHHHHHHHHHHHHHH
Confidence 2211 1 122334444 234565 6999999999997655578888887787 799999999999888752
Q ss_pred ------ceEEEeCceecCCCcH------HH----HHHHcCCc---c-CCCCcccCcccHhhHhhcc
Q 024417 222 ------GCVLRLAGLYKADRGA------HV----YWLQKGTV---D-SRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 ------~tIlRp~~vyG~~~~~------~~----~~l~~g~~---~-~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+++||++... .. ..+.+|.. + +.++..++|+|++|+|+++
T Consensus 156 ~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~ 221 (308)
T PRK11150 156 PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVN 221 (308)
T ss_pred HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHH
Confidence 6999999999997421 11 23455542 2 3456789999999999975
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-22 Score=179.78 Aligned_cols=181 Identities=18% Similarity=0.139 Sum_probs=130.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS- 155 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~- 155 (268)
|+|||+|+ |+||++|+++|+++ |++|++++|++++...+...+++.+.+|. +.++++|+|||+++....
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~ 78 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLW 78 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccC
Confidence 47999996 99999999999999 99999999987665444444677776664 256789999999975321
Q ss_pred -CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecC-CCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHc---
Q 024417 156 -LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDC-SDNGACDEDSPVVPIG-RSPRTDVLLKAEKVILEF--- 220 (268)
Q Consensus 156 -~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~-~~~~~~~E~~~~~p~~-~~~y~~sK~~aE~~l~~~--- 220 (268)
.+ .+.+..+++ ....+++++|++||..+|+. ..+.+++|+.+..|.. .+.|+.+|..+|++++++
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 158 (328)
T TIGR03466 79 APDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE 158 (328)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh
Confidence 11 122333443 24567899999999999985 3345789988876532 257999999999998874
Q ss_pred -C--ceEEEeCceecCCCcH------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 221 -G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 -~--~tIlRp~~vyG~~~~~------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+.+||++... .......+......+...+|+|++|+|+++
T Consensus 159 ~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~ 214 (328)
T TIGR03466 159 KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGH 214 (328)
T ss_pred cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHH
Confidence 3 7999999999997431 111122233222234557899999999975
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-22 Score=179.81 Aligned_cols=181 Identities=14% Similarity=0.033 Sum_probs=125.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh---hhc-----CCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN-----MGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~---l~~-----~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
.++|||||+ ||||++++++|+++ |++|+++.|+..+.+. +.. ..++.+.+|. ++++++|+||
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vi 82 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVF 82 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEE
Confidence 368999996 99999999999999 9999999997654322 111 2456666664 2467899999
Q ss_pred EccCCCCC--CC--------hHHHHHHHHH--Hh-cCCCeEEEEccCeee--cCC---CCCCCCCCCCCCCC----CCCH
Q 024417 148 FCAPPSRS--LD--------YPGDVRLAAL--SW-NGEGSFLFTSSSAIY--DCS---DNGACDEDSPVVPI----GRSP 205 (268)
Q Consensus 148 ~~a~~~~~--~~--------~~~~~~~~~~--~~-~gvkr~V~~SS~~vY--g~~---~~~~~~E~~~~~p~----~~~~ 205 (268)
|+|++... .+ .+.+..+++. ++ .+++||||+||.++| +.. .+.+++|+++..|. ..+.
T Consensus 83 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 162 (322)
T PLN02986 83 HTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW 162 (322)
T ss_pred EeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccc
Confidence 99986421 11 1233444441 33 368999999998754 432 23467888764431 2367
Q ss_pred HHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|..+|++++++ + ++++||+.+|||...+ ....+..|... .+.+.++|||++|+|+++
T Consensus 163 Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~v~v~Dva~a~ 236 (322)
T PLN02986 163 YPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL-FNNRFYRFVDVRDVALAH 236 (322)
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC-CCCcCcceeEHHHHHHHH
Confidence 999999999988764 3 7999999999996432 12223344432 246678999999999986
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.9e-22 Score=175.34 Aligned_cols=169 Identities=19% Similarity=0.204 Sum_probs=120.4
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccC--CCCEEEEccCCCCCC----C-
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ--KFPYVIFCAPPSRSL----D- 157 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~--~~D~Vi~~a~~~~~~----~- 157 (268)
||||+|+ |+||++|+++|+++ |++|++++|......... .+ .+.++ ++|+|||+++..... .
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~~~d~~~~~--~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~ 70 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSSQLDLTDPE--AL------ERLLRAIRPDAVVNTAAYTDVDGAESDP 70 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCcccCCCCHH--HH------HHHHHhCCCCEEEECCccccccccccCH
Confidence 5899996 99999999999999 999999998622111000 00 01233 469999999864321 1
Q ss_pred ---h---HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEe
Q 024417 158 ---Y---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (268)
Q Consensus 158 ---~---~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp 227 (268)
+ .....+++ +++.+ .+|||+||.++|+...+.+++|+++..|. +.|+++|.++|++++.++ ++|+||
T Consensus 71 ~~~~~~n~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~--~~Y~~~K~~~E~~~~~~~~~~~ilR~ 147 (287)
T TIGR01214 71 EKAFAVNALAPQNLARAAARHG-ARLVHISTDYVFDGEGKRPYREDDATNPL--NVYGQSKLAGEQAIRAAGPNALIVRT 147 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCc--chhhHHHHHHHHHHHHhCCCeEEEEe
Confidence 1 12334443 13344 48999999999987666689999987776 799999999999999876 899999
Q ss_pred CceecCCC--cHH---HHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 228 AGLYKADR--GAH---VYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 228 ~~vyG~~~--~~~---~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+||++. ... ...+.++.. ...++++++++|++|+|+++
T Consensus 148 ~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 193 (287)
T TIGR01214 148 SWLYGGGGGRNFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVI 193 (287)
T ss_pred eecccCCCCCCHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHH
Confidence 99999974 222 122333333 23356789999999999876
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.7e-22 Score=177.81 Aligned_cols=183 Identities=15% Similarity=0.113 Sum_probs=131.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh---hhcC-----CceeeccCc-------cccCCCCEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LINM-----GITPSLKWT-------EATQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~---l~~~-----~i~~~~~D~-------~~~~~~D~V 146 (268)
++++|+|||+ ||||++++++|+++ ||.|+++.|++++.+. +.+. ....+..|+ +++.+||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 4679999998 99999999999999 9999999999876322 3221 245555664 378999999
Q ss_pred EEccCCCCCC------C----hHHHHHHHHH--Hh-cCCCeEEEEccCeeec-C----CCCCCCCCCCCCCCCC----CC
Q 024417 147 IFCAPPSRSL------D----YPGDVRLAAL--SW-NGEGSFLFTSSSAIYD-C----SDNGACDEDSPVVPIG----RS 204 (268)
Q Consensus 147 i~~a~~~~~~------~----~~~~~~~~~~--~~-~gvkr~V~~SS~~vYg-~----~~~~~~~E~~~~~p~~----~~ 204 (268)
||+|.|...+ + .++++.+++. ++ ..|||+||+||++.-. . ..+..++|+..-++.. ..
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~ 162 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL 162 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence 9999985431 1 4567777762 23 3599999999975432 1 1234688887644321 14
Q ss_pred HHHHHHHHHHHHHHHcC------ceEEEeCceecCCCcH-------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 205 PRTDVLLKAEKVILEFG------GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~~------~tIlRp~~vyG~~~~~-------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.|..+|..+|+..+++. .+.+.|+.|+||...+ ....+.+|..-...+.+..|+|++|+|.|.
T Consensus 163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AH 238 (327)
T KOG1502|consen 163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAH 238 (327)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHH
Confidence 69999999999998874 5899999999997543 112244565433455566699999999874
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=182.41 Aligned_cols=167 Identities=18% Similarity=0.207 Sum_probs=110.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----cc--cCCCCEEEEccCCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EA--TQKFPYVIFCAPPSRSLD 157 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~--~~~~D~Vi~~a~~~~~~~ 157 (268)
|||||+|+ |+||++|.++|.++ |++|+++.|..-+. .|. +. -.++|+|||||+....+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~~~dl------------~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ 66 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRSDLDL------------TDPEAVAKLLEAFKPDVVINCAAYTNVDA 66 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTTCS-T------------TSHHHHHHHHHHH--SEEEE------HHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCchhcCC------------CCHHHHHHHHHHhCCCeEeccceeecHHh
Confidence 68999997 99999999999999 99999998862221 121 11 236899999998764321
Q ss_pred -----------hHHHHHHHH-HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ce
Q 024417 158 -----------YPGDVRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (268)
Q Consensus 158 -----------~~~~~~~~~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~t 223 (268)
.+....+++ .+.....++||+||..||+...+.+++|+++++|. +.||++|+++|+.+++.. ++
T Consensus 67 ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~--~~YG~~K~~~E~~v~~~~~~~~ 144 (286)
T PF04321_consen 67 CEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPL--NVYGRSKLEGEQAVRAACPNAL 144 (286)
T ss_dssp HHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----S--SHHHHHHHHHHHHHHHH-SSEE
T ss_pred hhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCC--CHHHHHHHHHHHHHHHhcCCEE
Confidence 122333443 12223369999999999987767789999999998 999999999999999853 89
Q ss_pred EEEeCceecCCCc-HH---HHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 224 VLRLAGLYKADRG-AH---VYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 224 IlRp~~vyG~~~~-~~---~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+|++++||+... +. ...+.+++. ....++.++++|++|+|+++
T Consensus 145 IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i 193 (286)
T PF04321_consen 145 ILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVI 193 (286)
T ss_dssp EEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHH
T ss_pred EEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHH
Confidence 9999999999543 32 233455654 34568899999999999976
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.9e-21 Score=176.66 Aligned_cols=181 Identities=13% Similarity=-0.016 Sum_probs=124.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh---hc-----CCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---IN-----MGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l---~~-----~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
.++|||||+ ||||++|+++|+++ |++|++++|+.+..... .. ..++.+.+|. +.++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 468999996 99999999999999 99999998876543221 11 1345555664 2467899999
Q ss_pred EccCCCCC----CCh-------HHHHHHHHH--Hh-cCCCeEEEEccCeeecCC-----CCCCCCCCCCCCCCC----CC
Q 024417 148 FCAPPSRS----LDY-------PGDVRLAAL--SW-NGEGSFLFTSSSAIYDCS-----DNGACDEDSPVVPIG----RS 204 (268)
Q Consensus 148 ~~a~~~~~----~~~-------~~~~~~~~~--~~-~gvkr~V~~SS~~vYg~~-----~~~~~~E~~~~~p~~----~~ 204 (268)
|+|+.... +++ ..+..+++. .. .++++||++||..+|+.. ...+++|+++..|.. .+
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 99986421 111 122333331 22 357899999999877542 234689998876531 25
Q ss_pred HHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.|+.+|+.+|++++.+ + ++++||+.+|||+..+ ....+.+|+... +.+.++|+|++|+|+++
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~ 237 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAH 237 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHH
Confidence 7999999999998764 3 7999999999997532 112233444321 24567899999999986
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=178.66 Aligned_cols=181 Identities=17% Similarity=0.117 Sum_probs=128.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhh------cCCceeeccCc---c----ccC--
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI------NMGITPSLKWT---E----ATQ-- 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~------~~~i~~~~~D~---~----~~~-- 141 (268)
.+++|||||+ ||||++|+++|+++ |++|++++|.++. .+.+. ..+++++.+|. + .++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 4578999996 99999999999999 9999999986542 11111 12355566664 1 233
Q ss_pred CCCEEEEccCCCCCC----C-------hHHHHHHHH--HHhcCCC-----eEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEG-----SFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvk-----r~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
++|+|||+|+..... + ...+..+++ +...+++ +|||+||..+||.... +++|+.++.|.
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~-- 159 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPR-- 159 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCC--
Confidence 579999999864321 1 122334443 2334554 8999999999997544 78999998887
Q ss_pred CHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-----HH----HHHHcCC-c---cCCCCcccCcccHhhHh
Q 024417 204 SPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-----HV----YWLQKGT-V---DSRPDHILNLIHYELPS 264 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-----~~----~~l~~g~-~---~~~g~~~~~~Ihv~DlA 264 (268)
+.|+.+|+++|++++.+ + .+..|+.++|||+... .. .++..|. + .+.+++.++|+|++|+|
T Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a 239 (340)
T PLN02653 160 SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYV 239 (340)
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHH
Confidence 89999999999998765 2 4678999999985431 11 1233454 2 36788999999999999
Q ss_pred hccC
Q 024417 265 RLQC 268 (268)
Q Consensus 265 ~ai~ 268 (268)
++++
T Consensus 240 ~a~~ 243 (340)
T PLN02653 240 EAMW 243 (340)
T ss_pred HHHH
Confidence 9863
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-21 Score=172.80 Aligned_cols=177 Identities=18% Similarity=0.144 Sum_probs=121.3
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc--CccccCCCCEEEEccCCCCC-CC-----
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WTEATQKFPYVIFCAPPSRS-LD----- 157 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~--D~~~~~~~D~Vi~~a~~~~~-~~----- 157 (268)
|||||+ ||||++|+++|+++ |++|++++|++++.+.+....+..... +.+.+.++|+|||||+.... .+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~ 78 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIADKRWTEER 78 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcccccCCHHH
Confidence 689996 99999999999999 999999999876644332122211111 12467899999999986431 11
Q ss_pred -------hHHHHHHHH--HHhcCC--CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc---C--
Q 024417 158 -------YPGDVRLAA--LSWNGE--GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---G-- 221 (268)
Q Consensus 158 -------~~~~~~~~~--~~~~gv--kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~---~-- 221 (268)
++..+++++ +.+.++ .++|++|+.++||...+.+++|+++..+. +.|++.+.+.|+.+... +
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~ 156 (292)
T TIGR01777 79 KQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD--DFLAELCRDWEEAAQAAEDLGTR 156 (292)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC--ChHHHHHHHHHHHhhhchhcCCc
Confidence 123344554 234565 35777788889997666688999865554 56667777777765532 2
Q ss_pred ceEEEeCceecCCCcHHHH---HHH--cCCccCCCCcccCcccHhhHhhcc
Q 024417 222 GCVLRLAGLYKADRGAHVY---WLQ--KGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 ~tIlRp~~vyG~~~~~~~~---~l~--~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++|+||+.+||++...... .+. .+..++.+++.++|||++|+|+++
T Consensus 157 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i 207 (292)
T TIGR01777 157 VVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLI 207 (292)
T ss_pred eEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHH
Confidence 8999999999997542221 111 122356788999999999999986
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-21 Score=178.14 Aligned_cols=182 Identities=13% Similarity=0.056 Sum_probs=120.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--------CCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--------~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
.++|||||+ ||||++|+++|+++ |++|++++|+.+....+.. ..++.+.+|. +.++++|+||
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 468999997 99999999999999 9999999997655432211 1244555554 2567899999
Q ss_pred EccCCCCCC--C--------hHHHHHHHHH--HhcC-CCeEEEEccCeeecCCC-CC-CCCCCCCC-------CCCCCCH
Q 024417 148 FCAPPSRSL--D--------YPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSD-NG-ACDEDSPV-------VPIGRSP 205 (268)
Q Consensus 148 ~~a~~~~~~--~--------~~~~~~~~~~--~~~g-vkr~V~~SS~~vYg~~~-~~-~~~E~~~~-------~p~~~~~ 205 (268)
|+|+..... + .+.++.+++. .+.+ +++|||+||.++|+... .. .++|+... .+...++
T Consensus 83 H~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 162 (351)
T PLN02650 83 HVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWM 162 (351)
T ss_pred EeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccch
Confidence 999854211 1 1234445542 3344 78999999998776432 22 35666421 0111258
Q ss_pred HHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH-----HHHHH--HcCC-ccCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA-----HVYWL--QKGT-VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~-----~~~~l--~~g~-~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|+.+|++++.+ + ++++||+++|||+... ....+ ..+. ......+.++|+|++|+|+++
T Consensus 163 Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~a~ 238 (351)
T PLN02650 163 YFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCNAH 238 (351)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHHHH
Confidence 999999999988765 3 7999999999997431 11111 1222 111122357999999999986
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.6e-21 Score=180.82 Aligned_cols=183 Identities=16% Similarity=0.056 Sum_probs=125.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----------CCceeeccCc-------cccC
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGITPSLKWT-------EATQ 141 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----------~~i~~~~~D~-------~~~~ 141 (268)
...+++|||||+ ||||++|+++|+++ |++|+++.|+.++.+.+.. .+++.+.+|. +.+.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 345789999996 99999999999999 9999998887554333221 1355555664 2467
Q ss_pred CCCEEEEccCCCCC-------CC----hHHHHHHHHH--Hhc-CCCeEEEEccC--eeecCC--CC--CCCCCCCCC---
Q 024417 142 KFPYVIFCAPPSRS-------LD----YPGDVRLAAL--SWN-GEGSFLFTSSS--AIYDCS--DN--GACDEDSPV--- 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-------~~----~~~~~~~~~~--~~~-gvkr~V~~SS~--~vYg~~--~~--~~~~E~~~~--- 198 (268)
++|+|||+++.... .. ..+++.+++. .+. +++||||+||. .+|+.. .+ .+++|+++.
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 89999999975311 11 2344555552 333 79999999996 578741 12 346776432
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc---H-HHHHHHcCCccCCCCcccCcccHhhHhh
Q 024417 199 ---VPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---A-HVYWLQKGTVDSRPDHILNLIHYELPSR 265 (268)
Q Consensus 199 ---~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~---~-~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ 265 (268)
.|. ++|+.+|+.+|++++.+ + ++++||+++|||+.. + ....+.+|.....++..++|+|++|+|+
T Consensus 208 ~~~~p~--~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~ 285 (367)
T PLN02686 208 FCRDNK--LWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVERLAE 285 (367)
T ss_pred hccccc--chHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHHHHHH
Confidence 233 68999999999998754 3 799999999999742 1 1222334443223444567999999999
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 286 A~ 287 (367)
T PLN02686 286 AH 287 (367)
T ss_pred HH
Confidence 86
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.5e-21 Score=175.72 Aligned_cols=181 Identities=16% Similarity=0.127 Sum_probs=126.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc----hhhh------cCCceeeccCc---c----cc--CC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELI------NMGITPSLKWT---E----AT--QK 142 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~----~~l~------~~~i~~~~~D~---~----~~--~~ 142 (268)
++++|||+|+ |+||++|+++|+++ |++|++++|..... ..+. ..+++.+.+|. + .+ .+
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 3578999996 99999999999999 99999998753221 1111 12355666664 1 22 27
Q ss_pred CCEEEEccCCCCC----CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 143 FPYVIFCAPPSRS----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 143 ~D~Vi~~a~~~~~----~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
+|+|||+|+.... .+. ..+..+++ +++.++++|||+||+++|+...+.+++|+++..|. +.|+.+
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~--~~Y~~s 159 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSAT--NPYGRT 159 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--CHHHHH
Confidence 8999999985321 111 22233443 24567899999999999987666789999998886 799999
Q ss_pred HHHHHHHHHHc-----C--ceEEEeCceecCCCc---------------HHHHHHHcCC---c--c------CCCCcccC
Q 024417 210 LLKAEKVILEF-----G--GCVLRLAGLYKADRG---------------AHVYWLQKGT---V--D------SRPDHILN 256 (268)
Q Consensus 210 K~~aE~~l~~~-----~--~tIlRp~~vyG~~~~---------------~~~~~l~~g~---~--~------~~g~~~~~ 256 (268)
|..+|++++.+ + .+++|++++||+... +....+..+. + + +.|.+.++
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 239 (352)
T PLN02240 160 KLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRD 239 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEe
Confidence 99999998753 2 588999999986320 1112233332 1 2 25788999
Q ss_pred cccHhhHhhcc
Q 024417 257 LIHYELPSRLQ 267 (268)
Q Consensus 257 ~Ihv~DlA~ai 267 (268)
|||++|+|+++
T Consensus 240 ~i~v~D~a~a~ 250 (352)
T PLN02240 240 YIHVMDLADGH 250 (352)
T ss_pred eEEHHHHHHHH
Confidence 99999999864
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.4e-21 Score=174.23 Aligned_cols=166 Identities=16% Similarity=0.119 Sum_probs=120.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+|||+|+ ||||++|+++|+++ ||+|++++|+.++...+...+++++.+|. ++++++|+|||+++....+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~ 78 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSD 78 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCC
Confidence 48999997 99999999999999 99999999987655545556788887774 2578999999998643221
Q ss_pred --C----hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEE
Q 024417 157 --D----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (268)
Q Consensus 157 --~----~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlR 226 (268)
. ..++..+++ +++.+++||||+||.+.+. . +. .+|.++|.++|+++++.+ ++|+|
T Consensus 79 ~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~----------~---~~--~~~~~~K~~~e~~l~~~~l~~tilR 143 (317)
T CHL00194 79 LYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ----------Y---PY--IPLMKLKSDIEQKLKKSGIPYTIFR 143 (317)
T ss_pred ccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc----------c---CC--ChHHHHHHHHHHHHHHcCCCeEEEe
Confidence 1 234445555 3567999999999854321 0 11 457789999999999887 89999
Q ss_pred eCceecCCCcHHHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 227 LAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 227 p~~vyG~~~~~~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|+.-.......+..+.. +..+++.++|||++|+|+++
T Consensus 144 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 186 (317)
T CHL00194 144 LAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFC 186 (317)
T ss_pred ecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHH
Confidence 999986421111111222222 34567788999999999876
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=172.38 Aligned_cols=179 Identities=16% Similarity=0.092 Sum_probs=122.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch----hhh---cCCceeeccCc---c----ccC--CCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELI---NMGITPSLKWT---E----ATQ--KFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~----~l~---~~~i~~~~~D~---~----~~~--~~D~Vi 147 (268)
|+|||||+ |+||++|+++|+++ |++|++++|..+... .+. ...++.+.+|. + .+. ++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 47999996 99999999999999 999999987533221 111 12244444553 2 232 699999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC-CCCCCCHHHHHHHHH
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKA 213 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~-~p~~~~~y~~sK~~a 213 (268)
|+|+..... . ......+++ +++.++++||++||.++||.....+++|+++. .|. +.|+.+|..+
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~--~~Y~~sK~~~ 156 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ--SPYGKSKLMV 156 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC--ChhHHHHHHH
Confidence 999754321 1 122333443 24568899999999999987555678999886 565 7999999999
Q ss_pred HHHHHHc-----C--ceEEEeCceecCCCc------------HHH---HHHHcC-C--c--c------CCCCcccCcccH
Q 024417 214 EKVILEF-----G--GCVLRLAGLYKADRG------------AHV---YWLQKG-T--V--D------SRPDHILNLIHY 260 (268)
Q Consensus 214 E~~l~~~-----~--~tIlRp~~vyG~~~~------------~~~---~~l~~g-~--~--~------~~g~~~~~~Ihv 260 (268)
|++++++ + .+++|++.+||+... .+. .++..+ . + + ..+.+.++|||+
T Consensus 157 E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (338)
T PRK10675 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_pred HHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEH
Confidence 9998753 2 589999998886310 111 112222 1 1 1 246788999999
Q ss_pred hhHhhcc
Q 024417 261 ELPSRLQ 267 (268)
Q Consensus 261 ~DlA~ai 267 (268)
+|+|+++
T Consensus 237 ~D~a~~~ 243 (338)
T PRK10675 237 MDLADGH 243 (338)
T ss_pred HHHHHHH
Confidence 9999865
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=9e-21 Score=173.96 Aligned_cols=179 Identities=13% Similarity=0.085 Sum_probs=122.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEEeCCC--Ccchhhhc----CCceeeccCc---c----ccC--CCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTA--DHHDELIN----MGITPSLKWT---E----ATQ--KFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~~R~~--~~~~~l~~----~~i~~~~~D~---~----~~~--~~D~Vi 147 (268)
|||||||+ ||||++|+++|+++ |++ |+++++.. .....+.. ..++.+.+|. + +++ ++|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 48999996 99999999999999 875 66666532 11122211 2244455554 1 333 589999
Q ss_pred EccCCCCCC-------C----hHHHHHHHHH--Hh---------cCCCeEEEEccCeeecCCC---------C-CCCCCC
Q 024417 148 FCAPPSRSL-------D----YPGDVRLAAL--SW---------NGEGSFLFTSSSAIYDCSD---------N-GACDED 195 (268)
Q Consensus 148 ~~a~~~~~~-------~----~~~~~~~~~~--~~---------~gvkr~V~~SS~~vYg~~~---------~-~~~~E~ 195 (268)
|+|+....+ + .+.+..+++. .. .++++|||+||..+||... . .+++|+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 999864321 1 2334444441 11 2467999999999998521 1 247888
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccH
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHY 260 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv 260 (268)
++..|. +.|+.+|+.+|++++.+ + .+++|++.+|||+... +...+..+.. ++.+++.++|||+
T Consensus 159 ~~~~p~--~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 159 TAYAPS--SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred CCCCCC--ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 888887 79999999999988764 3 6999999999997531 1122333432 4678999999999
Q ss_pred hhHhhcc
Q 024417 261 ELPSRLQ 267 (268)
Q Consensus 261 ~DlA~ai 267 (268)
+|+|+++
T Consensus 237 ~D~a~a~ 243 (352)
T PRK10084 237 EDHARAL 243 (352)
T ss_pred HHHHHHH
Confidence 9999986
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-21 Score=171.96 Aligned_cols=166 Identities=16% Similarity=0.128 Sum_probs=114.1
Q ss_pred EEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----ccc--CCCCEEEEccCCCCC-----
Q 024417 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EAT--QKFPYVIFCAPPSRS----- 155 (268)
Q Consensus 88 LI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~--~~~D~Vi~~a~~~~~----- 155 (268)
||||+ ||||++|+++|+++ |++|+++.+..+ . ...|. +.+ .++|+|||||+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~~~-~----------Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~ 67 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTHKE-L----------DLTRQADVEAFFAKEKPTYVILAAAKVGGIHANM 67 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeecccc-C----------CCCCHHHHHHHHhccCCCEEEEeeeeecccchhh
Confidence 58886 99999999999999 998876654321 0 11111 122 368999999976321
Q ss_pred CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHHc--
Q 024417 156 LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVILEF-- 220 (268)
Q Consensus 156 ~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----~~~p~~~~~y~~sK~~aE~~l~~~-- 220 (268)
.+ ......+++ +++.++++|||+||..||+.....+++|++ +..|.. ..|+.+|..+|++++.+
T Consensus 68 ~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~-~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 68 TYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN-EWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred hCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc-chHHHHHHHHHHHHHHHHH
Confidence 11 122344444 245688999999999999976667889987 333431 25999999999877643
Q ss_pred --C--ceEEEeCceecCCCcH----------HHHH----HHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 221 --G--GCVLRLAGLYKADRGA----------HVYW----LQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 --~--~tIlRp~~vyG~~~~~----------~~~~----l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+.+||++... +..+ ...+.+ .+.+++.++|||++|+++++
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~ 215 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAV 215 (306)
T ss_pred HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHH
Confidence 3 7999999999997421 1111 123432 35678899999999999986
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.2e-21 Score=175.13 Aligned_cols=182 Identities=14% Similarity=0.057 Sum_probs=120.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----cCCceeeccCc-------cccCCCCEEEEcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMGITPSLKWT-------EATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----~~~i~~~~~D~-------~~~~~~D~Vi~~a 150 (268)
.|+|||||+ ||||++|+++|+++ |++|++++|+.++...+. ..+++.+.+|. +.+.++|+|||+|
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 358999996 99999999999999 999999999765433221 12355566664 2467899999999
Q ss_pred CCCCCC------C---h---------HHHHHHHHH--Hhc-CCCeEEEEccCeeecCCC-----CCCCCCCCC--CC---
Q 024417 151 PPSRSL------D---Y---------PGDVRLAAL--SWN-GEGSFLFTSSSAIYDCSD-----NGACDEDSP--VV--- 199 (268)
Q Consensus 151 ~~~~~~------~---~---------~~~~~~~~~--~~~-gvkr~V~~SS~~vYg~~~-----~~~~~E~~~--~~--- 199 (268)
+..... + + ..+..+++. ++. ++++|||+||..+||... ..+++|+.+ ..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 864211 1 1 122334432 233 478999999999998432 135777632 11
Q ss_pred -C-CCCCHHHHHHHHHHHHHHHcC------ceEEEeCceecCCCcH----HHHHHH---cCCc--cC--CCC----cccC
Q 024417 200 -P-IGRSPRTDVLLKAEKVILEFG------GCVLRLAGLYKADRGA----HVYWLQ---KGTV--DS--RPD----HILN 256 (268)
Q Consensus 200 -p-~~~~~y~~sK~~aE~~l~~~~------~tIlRp~~vyG~~~~~----~~~~l~---~g~~--~~--~g~----~~~~ 256 (268)
+ ...++|+.+|+++|++++.+. .+++||+++|||+... ....+. .|.. .+ .+. ..++
T Consensus 168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d 247 (353)
T PLN02896 168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIA 247 (353)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCcee
Confidence 0 112489999999999887753 6999999999997531 111221 2321 11 111 2358
Q ss_pred cccHhhHhhcc
Q 024417 257 LIHYELPSRLQ 267 (268)
Q Consensus 257 ~Ihv~DlA~ai 267 (268)
|||++|+|+++
T Consensus 248 fi~v~Dva~a~ 258 (353)
T PLN02896 248 LVHIEDICDAH 258 (353)
T ss_pred EEeHHHHHHHH
Confidence 99999999986
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=167.10 Aligned_cols=165 Identities=15% Similarity=0.096 Sum_probs=126.9
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----ccc--CCCCEEEEccCCCCCCC-
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EAT--QKFPYVIFCAPPSRSLD- 157 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~--~~~D~Vi~~a~~~~~~~- 157 (268)
+|||+|+ |++|..|++.|. . +++|++++|..-+. .|. +.+ ..+|+|||||+....+.
T Consensus 2 ~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~~Di------------td~~~v~~~i~~~~PDvVIn~AAyt~vD~a 66 (281)
T COG1091 2 KILITGANGQLGTELRRALP-G--EFEVIATDRAELDI------------TDPDAVLEVIRETRPDVVINAAAYTAVDKA 66 (281)
T ss_pred cEEEEcCCChHHHHHHHHhC-C--CceEEeccCccccc------------cChHHHHHHHHhhCCCEEEECccccccccc
Confidence 4999997 999999999998 6 89999999865211 122 122 37899999999876432
Q ss_pred ----------hHHHHHHHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceE
Q 024417 158 ----------YPGDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (268)
Q Consensus 158 ----------~~~~~~~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tI 224 (268)
...+..+++. +..--.++||+||.+||+...+.++.|+++++|. +.||++|+.+|+.+++++ .+|
T Consensus 67 E~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~--nvYG~sKl~GE~~v~~~~~~~~I 144 (281)
T COG1091 67 ESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPL--NVYGRSKLAGEEAVRAAGPRHLI 144 (281)
T ss_pred cCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCCh--hhhhHHHHHHHHHHHHhCCCEEE
Confidence 1223344441 2223468999999999998877899999999998 899999999999999986 899
Q ss_pred EEeCceecCCC-cHHHH---HHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 225 LRLAGLYKADR-GAHVY---WLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 225 lRp~~vyG~~~-~~~~~---~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|.+++||... ++... ....|+. ....|+..+.++..|+|+++
T Consensus 145 ~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i 192 (281)
T COG1091 145 LRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAI 192 (281)
T ss_pred EEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHH
Confidence 99999999865 43322 2344543 45679999999999999986
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=169.51 Aligned_cols=174 Identities=13% Similarity=0.162 Sum_probs=116.5
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeeccCc---c---c-----cCCCCEEEEccCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWT---E---A-----TQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~D~---~---~-----~~~~D~Vi~~a~~~ 153 (268)
|||||+ ||||++|+++|+++ |+ +|++++|..... .+..........|. + . +.++|+|||+|+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~ 77 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS 77 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence 689996 99999999999999 97 798887754322 11111111222222 1 1 25899999999864
Q ss_pred CCC--C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHc-
Q 024417 154 RSL--D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKAEKVILEF- 220 (268)
Q Consensus 154 ~~~--~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~-~p~~~~~y~~sK~~aE~~l~~~- 220 (268)
... + ...+..+++ +.+.++ +|||+||.+||+.... +.+|++++ .|. +.|+.+|..+|++++++
T Consensus 78 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p~--~~Y~~sK~~~e~~~~~~~ 153 (314)
T TIGR02197 78 DTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERPL--NVYGYSKFLFDQYVRRRV 153 (314)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCCC--CHHHHHHHHHHHHHHHHh
Confidence 321 1 123334444 234455 8999999999996543 45666553 355 78999999999998763
Q ss_pred -----C--ceEEEeCceecCCCc------HHH----HHHHcCCc---------cCCCCcccCcccHhhHhhcc
Q 024417 221 -----G--GCVLRLAGLYKADRG------AHV----YWLQKGTV---------DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 -----~--~tIlRp~~vyG~~~~------~~~----~~l~~g~~---------~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ .+++||+.+||++.. .+. ..+..+.. ++.|++.++|+|++|+++++
T Consensus 154 ~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i 226 (314)
T TIGR02197 154 LPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVN 226 (314)
T ss_pred HhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHH
Confidence 1 689999999999742 111 12333432 14577889999999999886
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-20 Score=167.41 Aligned_cols=178 Identities=14% Similarity=0.089 Sum_probs=123.7
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCC--c---chhhh-cCCceeeccCc-------cccCC--CCEEE
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTAD--H---HDELI-NMGITPSLKWT-------EATQK--FPYVI 147 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~--~---~~~l~-~~~i~~~~~D~-------~~~~~--~D~Vi 147 (268)
+|||||+ |+||++|+++|+++ | ++|++++|... + ...+. ..+++++.+|. +++++ +|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNE--HPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHh--CCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence 5899996 99999999999998 6 78999886421 1 11111 12455666664 23455 89999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH--HHhcCC-CeEEEEccCeeecCCCC-CCCCCCCCCCCCCCCHHHHHHHH
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGE-GSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLK 212 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~--~~~~gv-kr~V~~SS~~vYg~~~~-~~~~E~~~~~p~~~~~y~~sK~~ 212 (268)
|+|+....+ + ...+..+++ +.+.+. .++||+||..+||.... .+++|+.+..|. +.|+.+|..
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~--~~Y~~sK~~ 156 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS--SPYSASKAA 156 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC--CchHHHHHH
Confidence 999864321 1 112233333 123333 38999999999996543 368899887776 789999999
Q ss_pred HHHHHHHc----C--ceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 213 AEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 213 aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|.+++.+ + ++++||+.+||++... +...+..+.. ++.+++.++|+|++|+|+++
T Consensus 157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~ 226 (317)
T TIGR01181 157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI 226 (317)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHH
Confidence 99988754 3 7999999999997531 1223344432 46778899999999999885
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=168.10 Aligned_cols=181 Identities=12% Similarity=0.044 Sum_probs=120.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc------hhhh--cCCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH------DELI--NMGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~------~~l~--~~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
.++|||||+ |+||++++++|+++ |++|++++|+.++. ..+. ..+++.+.+|. +.+.++|.|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~ 83 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLF 83 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 458999997 99999999999999 99999999864321 1111 12455666664 3678999999
Q ss_pred EccCCCCCC--C-------hHHHHHHHHH--Hh-cCCCeEEEEccCeee--cCC---CCCCCCCCCCCCCC----CCCHH
Q 024417 148 FCAPPSRSL--D-------YPGDVRLAAL--SW-NGEGSFLFTSSSAIY--DCS---DNGACDEDSPVVPI----GRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~--~-------~~~~~~~~~~--~~-~gvkr~V~~SS~~vY--g~~---~~~~~~E~~~~~p~----~~~~y 206 (268)
|++++.... + .+.+..+++. .+ .++++||++||...+ +.. ...+++|+++..+. ....|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y 163 (297)
T PLN02583 84 CCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWH 163 (297)
T ss_pred EeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHH
Confidence 987653321 1 2334444542 23 368999999998654 311 22367887653321 01269
Q ss_pred HHHHHHHHHHHHHc----C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|..+|++++++ + ++++||+++|||+...... ...+.....++..++|||++|+|+++
T Consensus 164 ~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~~~~~~v~V~Dva~a~ 229 (297)
T PLN02583 164 ALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP-YLKGAAQMYENGVLVTVDVNFLVDAH 229 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh-hhcCCcccCcccCcceEEHHHHHHHH
Confidence 99999999998654 3 7999999999997543221 22233222234467899999999985
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=161.44 Aligned_cols=176 Identities=19% Similarity=0.150 Sum_probs=126.7
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccC-CCCEEEEccCCCCCCC-hHH---
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ-KFPYVIFCAPPSRSLD-YPG--- 160 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~-~~D~Vi~~a~~~~~~~-~~~--- 160 (268)
|+|+|. |+||++|+.+|.+. ||+|++++|++.+........+.......+... ++|+|||+|+..-.+. |-+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K 78 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTEKQK 78 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCHHHH
Confidence 689986 99999999999999 999999999987765433323332222223333 7999999999754332 211
Q ss_pred ---------HHHHH---HH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-----c
Q 024417 161 ---------DVRLA---AL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-----G 222 (268)
Q Consensus 161 ---------~~~~~---~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~-----~ 222 (268)
.++.+ +. .+..++.+|-.|.++.||...+..++|++++.. .--++...+.|+..++.. +
T Consensus 79 ~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~---~Fla~lc~~WE~~a~~a~~~gtRv 155 (297)
T COG1090 79 EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD---DFLAQLCQDWEEEALQAQQLGTRV 155 (297)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC---ChHHHHHHHHHHHHhhhhhcCceE
Confidence 12222 21 345678899999999999988889999976433 345566667787776653 6
Q ss_pred eEEEeCceecCCCcHHH-----HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRGAHV-----YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~-----~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++|.|.|.++..+.+. +++.-|-..++|.|+++|||++|++++|
T Consensus 156 vllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I 205 (297)
T COG1090 156 VLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAI 205 (297)
T ss_pred EEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHH
Confidence 99999999998765432 2344555679999999999999999886
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-20 Score=156.84 Aligned_cols=165 Identities=19% Similarity=0.203 Sum_probs=125.9
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCCCh
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSLDY 158 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~~~ 158 (268)
|+|+|+ |++|+.|+++|+++ |++|++++|++++.+. ..+++.+.+|. +++.++|+||+++++...+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~-- 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKD-- 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTH--
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccc--
Confidence 789997 99999999999999 9999999999887655 56888887775 2678999999999876542
Q ss_pred HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCceecCC
Q 024417 159 PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYKAD 234 (268)
Q Consensus 159 ~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~vyG~~ 234 (268)
...+++++ .++.+++|+|++|+.++|+........+..+ .+ ..|...|.++|+.+++.+ |+++||+.+||+.
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKP-IF---PEYARDKREAEEALRESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCG-GG---HHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTT
T ss_pred ccccccccccccccccccceeeeccccCCCCCccccccccc-ch---hhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCC
Confidence 44455554 3567899999999999998644322222211 11 468889999999999877 9999999999986
Q ss_pred CcHHHHHHHcCCc-cCCCCcccCcccHhhHhhccC
Q 024417 235 RGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQC 268 (268)
Q Consensus 235 ~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai~ 268 (268)
.. .+.. ...+....++||++|+|++++
T Consensus 151 ~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~ 178 (183)
T PF13460_consen 151 SR-------SYRLIKEGGPQGVNFISREDVAKAIV 178 (183)
T ss_dssp SS-------SEEEESSTSTTSHCEEEHHHHHHHHH
T ss_pred Cc-------ceeEEeccCCCCcCcCCHHHHHHHHH
Confidence 43 1111 124566779999999999873
|
... |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-20 Score=164.75 Aligned_cols=181 Identities=16% Similarity=0.167 Sum_probs=133.0
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCC--Ccchhhh----cCCceeeccCcc---------ccCCCCEEEE
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELI----NMGITPSLKWTE---------ATQKFPYVIF 148 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~--~~~~~l~----~~~i~~~~~D~~---------~~~~~D~Vi~ 148 (268)
+++||+| +||||++.++.+...+|.+..+.++.-. .....++ ..+.+++.+|.. ...+.|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 6899998 5999999999999999998887776411 1122222 234555555541 2468999999
Q ss_pred ccCCCCCCC-h----------HHHHHHHHH---HhcCCCeEEEEccCeeecCCCCCCCC-CCCCCCCCCCCHHHHHHHHH
Q 024417 149 CAPPSRSLD-Y----------PGDVRLAAL---SWNGEGSFLFTSSSAIYDCSDNGACD-EDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 149 ~a~~~~~~~-~----------~~~~~~~~~---~~~gvkr~V~~SS~~vYg~~~~~~~~-E~~~~~p~~~~~y~~sK~~a 213 (268)
.|+....+. + +-....++. ...++++|||+||..|||+..+.+.. |.+.++|. ++|+++|+++
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPt--npyAasKaAa 164 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPT--NPYAASKAAA 164 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCC--CchHHHHHHH
Confidence 998765421 1 112223331 22378999999999999998776666 99999998 9999999999
Q ss_pred HHHHHHcC------ceEEEeCceecCCCcHH------HHHHHcCC---ccCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEFG------GCVLRLAGLYKADRGAH------VYWLQKGT---VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~~------~tIlRp~~vyG~~~~~~------~~~l~~g~---~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|..++.++ ++++|.++||||++.+. +....++. +-+.|.+.++|+|++|+++|+
T Consensus 165 E~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~ 233 (331)
T KOG0747|consen 165 EMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAF 233 (331)
T ss_pred HHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHH
Confidence 99999885 69999999999987542 12223333 257889999999999999886
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=163.26 Aligned_cols=182 Identities=16% Similarity=0.097 Sum_probs=128.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-hhh----cCCceeeccCc--cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELI----NMGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-~l~----~~~i~~~~~D~--~~~~~~D~Vi~~a~~~~~ 155 (268)
.++|+|||+ ||||+||+++|..+ ||+|+++|.-..... .++ ...++.+.-|. ..+.++|.|+|+|++...
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp 104 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP 104 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence 368999986 99999999999999 999999997533322 221 12233333332 367899999999987543
Q ss_pred CCh-----------HHHHHHHH-HHhcCCCeEEEEccCeeecCCCCCCCCCCCC--CCCCC-CCHHHHHHHHHHHHHHHc
Q 024417 156 LDY-----------PGDVRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP--VVPIG-RSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 156 ~~~-----------~~~~~~~~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~--~~p~~-~~~y~~sK~~aE~~l~~~ 220 (268)
..| .-++.+.+ .++.-.+||+++||+.|||++...+-.|+.. .+|.+ +..|...|+.+|.++..+
T Consensus 105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y 184 (350)
T KOG1429|consen 105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY 184 (350)
T ss_pred cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence 221 12233333 2333349999999999999866555555543 33432 268999999999999888
Q ss_pred C------ceEEEeCceecCCCcHH--------HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 221 G------GCVLRLAGLYKADRGAH--------VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ~------~tIlRp~~vyG~~~~~~--------~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ..|.|+.+.|||...+. ...+.++++ +++|.+.++|.|+.|+++++
T Consensus 185 ~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegl 248 (350)
T KOG1429|consen 185 HKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGL 248 (350)
T ss_pred hcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHH
Confidence 5 69999999999975431 112334443 78999999999999998875
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.3e-20 Score=167.81 Aligned_cols=184 Identities=21% Similarity=0.191 Sum_probs=133.1
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---hhh---cCCceeeccCc-------cccCCCCEEEE
Q 024417 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELI---NMGITPSLKWT-------EATQKFPYVIF 148 (268)
Q Consensus 83 ~m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~l~---~~~i~~~~~D~-------~~~~~~D~Vi~ 148 (268)
.|.++|||| +||+|+||+++|+++.+..+|+++|..+.... +.. ...++.+.+|. .+++++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 367899998 59999999999999922389999998765321 111 23455555664 267888 8888
Q ss_pred ccCCCCCC------C-----hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCC-CCCCCCCCCCCCCCCHHHHHHHHHH
Q 024417 149 CAPPSRSL------D-----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKAE 214 (268)
Q Consensus 149 ~a~~~~~~------~-----~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~-~~~~E~~~~~p~~~~~y~~sK~~aE 214 (268)
||+....+ + .++++++++ ..+.+++++||+||.+|+..... .-.+|+.|.......+|+.+|+.+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 87643211 1 467777776 35789999999999999865443 3456666643322368999999999
Q ss_pred HHHHHcC------ceEEEeCceecCCCcHH----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 215 KVILEFG------GCVLRLAGLYKADRGAH----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 215 ~~l~~~~------~tIlRp~~vyG~~~~~~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++++.+ +++|||+.||||++..+ ...+.+|.. .+.++.+.++++++.+|.+.
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ah 227 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAH 227 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHH
Confidence 9999875 79999999999987532 334566664 56778899999999887653
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=177.30 Aligned_cols=180 Identities=17% Similarity=0.101 Sum_probs=121.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHH--hcCCCCeEEEEeCCCCcc--hhhh----cCCceeeccCcc------------ccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWR--QEHPGCQIYGQTMTADHH--DELI----NMGITPSLKWTE------------ATQKF 143 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~--~~~~G~~V~~~~R~~~~~--~~l~----~~~i~~~~~D~~------------~~~~~ 143 (268)
|+|||||+ ||||++|+++|+ ++ |++|++++|+.... ..+. ...++.+.+|.. .+.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR--EATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC--CCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCC
Confidence 48999997 999999999999 46 99999999964321 1111 124556555531 23789
Q ss_pred CEEEEccCCCCCC-C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC-CCCCHHHHHHHH
Q 024417 144 PYVIFCAPPSRSL-D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP-IGRSPRTDVLLK 212 (268)
Q Consensus 144 D~Vi~~a~~~~~~-~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p-~~~~~y~~sK~~ 212 (268)
|+|||||+..... . .++++++++ +++.++++|||+||.++||... ..++|+....+ ...+.|+++|++
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~~~~~~~~~Y~~sK~~ 157 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFDEGQGLPTPYHRTKFE 157 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-CccccccchhhcCCCCchHHHHHH
Confidence 9999999864321 1 234455554 2456789999999999998643 34556543211 112679999999
Q ss_pred HHHHHHHc-C--ceEEEeCceecCCCcH----------HHHHHHc-CC------ccCCCCcccCcccHhhHhhcc
Q 024417 213 AEKVILEF-G--GCVLRLAGLYKADRGA----------HVYWLQK-GT------VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 213 aE~~l~~~-~--~tIlRp~~vyG~~~~~----------~~~~l~~-g~------~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|+++++. + ++|+||+.+||+.... +...+.. +. ....++...+++|++|+++++
T Consensus 158 ~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai 232 (657)
T PRK07201 158 AEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADAL 232 (657)
T ss_pred HHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHH
Confidence 99999864 3 7999999999985321 1111111 11 123456778999999999876
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-19 Score=172.93 Aligned_cols=185 Identities=13% Similarity=0.108 Sum_probs=123.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch---hhh------------------------cCCceee
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD---ELI------------------------NMGITPS 133 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~---~l~------------------------~~~i~~~ 133 (268)
+.++|||||+ ||||++|+++|++..|.. +|+++.|...... .+. ...++++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i 89 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV 89 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence 3578999997 999999999998762233 6899999653211 110 0235555
Q ss_pred ccCc--------------cccCCCCEEEEccCCCCCCC--------hHHHHHHHH--HHh-cCCCeEEEEccCeeecCCC
Q 024417 134 LKWT--------------EATQKFPYVIFCAPPSRSLD--------YPGDVRLAA--LSW-NGEGSFLFTSSSAIYDCSD 188 (268)
Q Consensus 134 ~~D~--------------~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~~~--~~~-~gvkr~V~~SS~~vYg~~~ 188 (268)
.+|. +.++++|+|||+|+...... .+.++.+++ +++ .++++|||+||.+|||...
T Consensus 90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~ 169 (491)
T PLN02996 90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKS 169 (491)
T ss_pred ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCC
Confidence 5553 13468999999998754321 244455555 223 3689999999999998643
Q ss_pred C----CCCCCCC--------------------------------------------CC-CCCCCCHHHHHHHHHHHHHHH
Q 024417 189 N----GACDEDS--------------------------------------------PV-VPIGRSPRTDVLLKAEKVILE 219 (268)
Q Consensus 189 ~----~~~~E~~--------------------------------------------~~-~p~~~~~y~~sK~~aE~~l~~ 219 (268)
+ .++.+.. +. .....+.|+.+|+.+|+++++
T Consensus 170 ~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~ 249 (491)
T PLN02996 170 GLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGN 249 (491)
T ss_pred ceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHH
Confidence 2 1111000 00 001126799999999999988
Q ss_pred cC----ceEEEeCceecCCCcHHH-------------HHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 220 FG----GCVLRLAGLYKADRGAHV-------------YWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 220 ~~----~tIlRp~~vyG~~~~~~~-------------~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+. .+|+||++|||+.+.+.. ..+.+|.+ +++|++.+++||++|+|+++
T Consensus 250 ~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~ 317 (491)
T PLN02996 250 FKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAM 317 (491)
T ss_pred hcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHH
Confidence 63 799999999998654311 11234543 57889999999999999986
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.9e-19 Score=160.51 Aligned_cols=166 Identities=15% Similarity=0.109 Sum_probs=117.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchhhh----cCCceeeccCc-------cccCCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELI----NMGITPSLKWT-------EATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~l~----~~~i~~~~~D~-------~~~~~~D~Vi~~ 149 (268)
.++|||||+ |+||++|+++|+++ | ++|++++|+..+...+. ..+++.+.+|. +.++++|+|||+
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~--g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLEN--YNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHh--CCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 468999996 99999999999998 6 79999998765432221 12455666664 256789999999
Q ss_pred cCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 024417 150 APPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (268)
Q Consensus 150 a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~ 216 (268)
|+..... + .+.+..+++ +...++++||++||.. +..|. ++|+.+|..+|++
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~--------------~~~p~--~~Y~~sK~~~E~l 145 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDK--------------AANPI--NLYGATKLASDKL 145 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCC--------------CCCCC--CHHHHHHHHHHHH
Confidence 9864321 1 122333443 2456789999999853 12344 6899999999998
Q ss_pred HHHc-------C--ceEEEeCceecCCCcH---HHHHHHcCC-c--cCCCCcccCcccHhhHhhcc
Q 024417 217 ILEF-------G--GCVLRLAGLYKADRGA---HVYWLQKGT-V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 217 l~~~-------~--~tIlRp~~vyG~~~~~---~~~~l~~g~-~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
++.+ + .+++||+++|||+... +...+..|. . +..+++.++|+|++|+|+++
T Consensus 146 ~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~ 211 (324)
T TIGR03589 146 FVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFV 211 (324)
T ss_pred HHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHH
Confidence 8652 2 6999999999997542 222334454 2 45677889999999999986
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=157.02 Aligned_cols=178 Identities=21% Similarity=0.218 Sum_probs=122.7
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcC----CceeeccCc---c----cc--CCCCEEEEcc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINM----GITPSLKWT---E----AT--QKFPYVIFCA 150 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~----~i~~~~~D~---~----~~--~~~D~Vi~~a 150 (268)
||||+|+ |+||++++++|+++ |++|++++|.... ...+... +++.+.+|. + .+ .++|+|||+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899996 99999999999999 9999988764322 1111111 344555554 1 22 3799999999
Q ss_pred CCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024417 151 PPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (268)
Q Consensus 151 ~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l 217 (268)
+..... + ......+++ ..+.+++++|++||..+|+.....+++|+++..|. +.|+.+|..+|+++
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~--~~y~~sK~~~e~~~ 156 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI--NPYGRSKLMSERIL 156 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCC--CchHHHHHHHHHHH
Confidence 864221 1 122233333 24567899999999999987655678999988776 78999999999988
Q ss_pred HHc-----C--ceEEEeCceecCCCcH-----------HHH----HHH-cCC-c--------cCCCCcccCcccHhhHhh
Q 024417 218 LEF-----G--GCVLRLAGLYKADRGA-----------HVY----WLQ-KGT-V--------DSRPDHILNLIHYELPSR 265 (268)
Q Consensus 218 ~~~-----~--~tIlRp~~vyG~~~~~-----------~~~----~l~-~g~-~--------~~~g~~~~~~Ihv~DlA~ 265 (268)
+.+ + ++++||+.+||+.... +.. ... ... + ...++..++|||++|+|+
T Consensus 157 ~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~ 236 (328)
T TIGR01179 157 RDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLAD 236 (328)
T ss_pred HHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHH
Confidence 753 2 7999999999985311 111 111 111 1 134567889999999998
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 237 ~~ 238 (328)
T TIGR01179 237 AH 238 (328)
T ss_pred HH
Confidence 75
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=6e-18 Score=152.78 Aligned_cols=167 Identities=14% Similarity=0.087 Sum_probs=109.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCCCC-------
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL------- 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~------- 156 (268)
|||||||+ ||||++|+++|+++ |++|+...++......+ ..+.+ ..++|+|||||+.....
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~~~~~~~~v--------~~~l~-~~~~D~ViH~Aa~~~~~~~~~~~~ 78 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSGRLENRASL--------EADID-AVKPTHVFNAAGVTGRPNVDWCES 78 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhC--CCEEEEecCccCCHHHH--------HHHHH-hcCCCEEEECCcccCCCCchhhhh
Confidence 58999996 99999999999999 99998654432222111 11111 13789999999875321
Q ss_pred C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 024417 157 D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD------NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG 221 (268)
Q Consensus 157 ~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~------~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~ 221 (268)
+ .+.+..+++ +++.+++ +|++||..+|+... +.+++|++++.+. .+.|+.+|+.+|++++.+.
T Consensus 79 ~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~-~s~Yg~sK~~~E~~~~~y~ 156 (298)
T PLN02778 79 HKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT-GSFYSKTKAMVEELLKNYE 156 (298)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCC-CCchHHHHHHHHHHHHHhh
Confidence 1 122334444 2455775 56678888886432 2247777665432 2789999999999999875
Q ss_pred -ceEEEeCceecCCCc---HHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRG---AHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~---~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
..++|+...+|++.. .+...+.+++. ...+ .+|+|++|+++++
T Consensus 157 ~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~---~s~~yv~D~v~al 204 (298)
T PLN02778 157 NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP---NSMTILDELLPIS 204 (298)
T ss_pred ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC---CCCEEHHHHHHHH
Confidence 789999888886532 23334444442 2222 3799999999875
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-18 Score=158.99 Aligned_cols=167 Identities=14% Similarity=0.136 Sum_probs=117.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch------hh--hcCCceeeccCc---c----ccC----
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD------EL--INMGITPSLKWT---E----ATQ---- 141 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~------~l--~~~~i~~~~~D~---~----~~~---- 141 (268)
..+++|||+|+ |+||++++++|+++ |++|++++|+..+.. .+ ...+++.+.+|. + .++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCC
Confidence 34679999996 99999999999999 999999999764321 11 113566676664 1 233
Q ss_pred CCCEEEEccCCCCC---CCh---HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 142 KFPYVIFCAPPSRS---LDY---PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~---~~~---~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
++|+||||++.... +.+ .....+++ +++.++++||++||.++|+ |. ..|.++|.+.
T Consensus 136 ~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p~--~~~~~sK~~~ 199 (390)
T PLN02657 136 PVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------PL--LEFQRAKLKF 199 (390)
T ss_pred CCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------cc--hHHHHHHHHH
Confidence 69999999875321 112 23444554 2567899999999988753 22 4577899999
Q ss_pred HHHHHH--cC--ceEEEeCceecCCCcHHHHHHHcCCc---cCCCCcc-cCcccHhhHhhcc
Q 024417 214 EKVILE--FG--GCVLRLAGLYKADRGAHVYWLQKGTV---DSRPDHI-LNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~--~~--~tIlRp~~vyG~~~~~~~~~l~~g~~---~~~g~~~-~~~Ihv~DlA~ai 267 (268)
|+.+++ .+ ++|+||+.+||+... ....+.+|.+ .++|+.. .++||++|+|+++
T Consensus 200 E~~l~~~~~gl~~tIlRp~~~~~~~~~-~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i 260 (390)
T PLN02657 200 EAELQALDSDFTYSIVRPTAFFKSLGG-QVEIVKDGGPYVMFGDGKLCACKPISEADLASFI 260 (390)
T ss_pred HHHHHhccCCCCEEEEccHHHhcccHH-HHHhhccCCceEEecCCcccccCceeHHHHHHHH
Confidence 999986 44 899999999986322 2234555654 3555543 3689999999875
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.4e-18 Score=154.28 Aligned_cols=179 Identities=13% Similarity=0.094 Sum_probs=119.1
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcch---hhh----c----------CCceeeccCc--------
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD---ELI----N----------MGITPSLKWT-------- 137 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~---~l~----~----------~~i~~~~~D~-------- 137 (268)
+|||||+ ||||++|+++|+++ | ++|+++.|+.+... .+. . .+++.+.+|.
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~--g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~ 78 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRR--STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS 78 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhC--CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC
Confidence 5899997 99999999999999 8 67999999765221 111 0 2456666663
Q ss_pred -----cccCCCCEEEEccCCCCC-CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC-
Q 024417 138 -----EATQKFPYVIFCAPPSRS-LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI- 201 (268)
Q Consensus 138 -----~~~~~~D~Vi~~a~~~~~-~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~- 201 (268)
+...++|+|||+|+.... .. .+.+..+++ +.+.++++|||+||.++|+.....+..|+.+..+.
T Consensus 79 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~ 158 (367)
T TIGR01746 79 DAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPP 158 (367)
T ss_pred HHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccc
Confidence 134689999999986432 11 233444444 24557888999999999986433334454443211
Q ss_pred --CCCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCCCc-------HHHHH----HHcCCccCCCC-cccCcccHhh
Q 024417 202 --GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRG-------AHVYW----LQKGTVDSRPD-HILNLIHYEL 262 (268)
Q Consensus 202 --~~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~~~-------~~~~~----l~~g~~~~~g~-~~~~~Ihv~D 262 (268)
..+.|+.+|+.+|++++++ + ++++||+.+||+... .+... +..+. ++..+ ...+++|++|
T Consensus 159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~vdd 237 (367)
T TIGR01746 159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA-YPDSPELTEDLTPVDY 237 (367)
T ss_pred cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC-CCCCCccccCcccHHH
Confidence 1257999999999998765 3 799999999997321 11111 12222 23333 4678999999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 238 va~ai 242 (367)
T TIGR01746 238 VARAI 242 (367)
T ss_pred HHHHH
Confidence 99886
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=145.17 Aligned_cols=173 Identities=16% Similarity=0.111 Sum_probs=114.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc--------ccc-CCCCEEEEcc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT--------EAT-QKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~--------~~~-~~~D~Vi~~a 150 (268)
.||+|||+|+ |+||+.|+++|+++ |++|+++.|++++...+.. .+++++.+|. +.+ .++|+||+++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 3679999997 99999999999999 9999999998765433221 2466665553 134 5899999998
Q ss_pred CCCCC-CC------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHHc
Q 024417 151 PPSRS-LD------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 151 ~~~~~-~~------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~-~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
+.... +. ...+..+++ +++.+++||||+||.++|+...+.+..+... .++. ..+...|+.+|+++++.
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~--~~~~~~k~~~e~~l~~~ 171 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLF--GLTLVAKLQAEKYIRKS 171 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHH--HHHHHHHHHHHHHHHhc
Confidence 75321 11 122344444 2456889999999999998543322222111 0111 23445788999999887
Q ss_pred C--ceEEEeCceecCCCcHHHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 221 G--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ~--~tIlRp~~vyG~~~~~~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+++++.... +.. ........++|+.+|+|+++
T Consensus 172 gi~~~iirpg~~~~~~~~--------~~~~~~~~~~~~~~~i~~~dvA~~~ 214 (251)
T PLN00141 172 GINYTIVRPGGLTNDPPT--------GNIVMEPEDTLYEGSISRDQVAEVA 214 (251)
T ss_pred CCcEEEEECCCccCCCCC--------ceEEECCCCccccCcccHHHHHHHH
Confidence 6 899999999976421 111 11112234689999999876
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.1e-18 Score=150.64 Aligned_cols=178 Identities=17% Similarity=0.182 Sum_probs=100.0
Q ss_pred EEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc---chhh----------------hcCCceeeccCcc----------
Q 024417 89 IVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH---HDEL----------------INMGITPSLKWTE---------- 138 (268)
Q Consensus 89 I~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~---~~~l----------------~~~~i~~~~~D~~---------- 138 (268)
|||+ ||||++|+++|+++.+..+|+++.|..+. .+.+ ....++++.+|..
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 6897 99999999999998222399999997643 1111 1345777777751
Q ss_pred ---ccCCCCEEEEccCCCCCC-C-------hHHHHHHHHH--HhcCCCeEEEEccCeeecCCCCCCCCC-------CCC-
Q 024417 139 ---ATQKFPYVIFCAPPSRSL-D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDE-------DSP- 197 (268)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~~~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E-------~~~- 197 (268)
..+++|+|||||+..... . +++++++++. .....++|+|+||..+.+...+ .+.| +..
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~-~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPG-TIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TT-T--SSS-HHH--EEE
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCC-cccccccccccccch
Confidence 346899999999975432 1 4677777762 3345669999999655554322 2211 111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCC-c------HHH----HHHHcCCc---cCCCCcccCc
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADR-G------AHV----YWLQKGTV---DSRPDHILNL 257 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~-~------~~~----~~l~~g~~---~~~g~~~~~~ 257 (268)
..+...+.|.++|+.+|++++++ + ++|+||+.|+|... + ... ..+..|.. .+.++...++
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~ 239 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL 239 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence 11222368999999999999876 3 79999999999422 1 111 12344443 3445677999
Q ss_pred ccHhhHhhcc
Q 024417 258 IHYELPSRLQ 267 (268)
Q Consensus 258 Ihv~DlA~ai 267 (268)
+.|+.+|++|
T Consensus 240 vPVD~va~aI 249 (249)
T PF07993_consen 240 VPVDYVARAI 249 (249)
T ss_dssp EEHHHHHHHH
T ss_pred ECHHHHHhhC
Confidence 9999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.5e-17 Score=146.74 Aligned_cols=178 Identities=16% Similarity=0.172 Sum_probs=129.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-------cchhhhc--CCceeeccCc---c------ccCCCCE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-------HHDELIN--MGITPSLKWT---E------ATQKFPY 145 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-------~~~~l~~--~~i~~~~~D~---~------~~~~~D~ 145 (268)
++|||||. ||||+|.+-+|+++ |+.|+++|.=.. +...+.. .++.++.+|. + ...++|.
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 58999985 99999999999999 999999986321 1222222 4577777665 2 2457999
Q ss_pred EEEccCCCCCCC-------h----HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC-CCCCCHHHHHHH
Q 024417 146 VIFCAPPSRSLD-------Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV-PIGRSPRTDVLL 211 (268)
Q Consensus 146 Vi~~a~~~~~~~-------~----~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~-p~~~~~y~~sK~ 211 (268)
|+|.|+.....+ | .-+..+++ .++.+++.+||.||+.|||.+..-|++|++|.. |. ++|+++|.
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~--~pyg~tK~ 158 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPT--NPYGKTKK 158 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCC--CcchhhhH
Confidence 999998654321 1 22334444 356679999999999999988778999999988 66 89999999
Q ss_pred HHHHHHHHcC------ceEEEeCceec--CC----CcH------H---HHHHHcC---------Cc--cCCCCcccCccc
Q 024417 212 KAEKVILEFG------GCVLRLAGLYK--AD----RGA------H---VYWLQKG---------TV--DSRPDHILNLIH 259 (268)
Q Consensus 212 ~aE~~l~~~~------~tIlRp~~vyG--~~----~~~------~---~~~l~~g---------~~--~~~g~~~~~~Ih 259 (268)
..|+.+.... .+.||..+++| |. ..+ + ...+.-| .. ..+|+..+++||
T Consensus 159 ~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~ 238 (343)
T KOG1371|consen 159 AIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIH 238 (343)
T ss_pred HHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeeccee
Confidence 9999998764 58999999998 31 111 0 0111111 11 245689999999
Q ss_pred HhhHhhc
Q 024417 260 YELPSRL 266 (268)
Q Consensus 260 v~DlA~a 266 (268)
+-|+|+.
T Consensus 239 v~Dla~~ 245 (343)
T KOG1371|consen 239 VLDLADG 245 (343)
T ss_pred eEehHHH
Confidence 9999874
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4.3e-17 Score=163.91 Aligned_cols=151 Identities=19% Similarity=0.197 Sum_probs=109.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|||+|||+ ||||++|+++|+++ |++|++++|+.... + ..+++.+.+|. +.++++|+|||+|+.....
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~--~-~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~ 75 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDS--W-PSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRN 75 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhh--c-ccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccch
Confidence 47999996 99999999999999 99999999974321 1 12455555554 2567899999999864321
Q ss_pred --ChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCce
Q 024417 157 --DYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (268)
Q Consensus 157 --~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~v 230 (268)
.+..++.+++ +++.++++|||+||.. |.++|+++.+++ ++++||+++
T Consensus 76 ~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------------K~aaE~ll~~~gl~~vILRp~~V 128 (854)
T PRK05865 76 DHINIDGTANVLKAMAETGTGRIVFTSSGH---------------------------QPRVEQMLADCGLEWVAVRCALI 128 (854)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEEEECCcH---------------------------HHHHHHHHHHcCCCEEEEEeceE
Confidence 1344555555 3456889999999842 778999998876 899999999
Q ss_pred ecCCCcHHHHHHHcCCcc--CCCCcccCcccHhhHhhcc
Q 024417 231 YKADRGAHVYWLQKGTVD--SRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 231 yG~~~~~~~~~l~~g~~~--~~g~~~~~~Ihv~DlA~ai 267 (268)
|||+.......+...... +.++..++|||++|+|+++
T Consensus 129 YGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai 167 (854)
T PRK05865 129 FGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLL 167 (854)
T ss_pred eCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHH
Confidence 999743323233222222 3445677999999999986
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-16 Score=139.20 Aligned_cols=155 Identities=14% Similarity=0.124 Sum_probs=105.5
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----cc------CC-CCEEEEcc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----AT------QK-FPYVIFCA 150 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~------~~-~D~Vi~~a 150 (268)
+|||+|+ |+||++++++|+++ |++|++++|++++... .+++.+.+|. + ++ .+ +|.|+|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~~---~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSAG---PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccccC---CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence 5899997 99999999999999 9999999999765432 3444444443 2 34 56 99999998
Q ss_pred CCCCCCChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-C--ceEE
Q 024417 151 PPSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVL 225 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-~--~tIl 225 (268)
+.... ..+..++++ +++.|++||||+||.+++.. .+ .+...|+++++. + +|++
T Consensus 76 ~~~~~--~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------~~--------~~~~~~~~l~~~~gi~~til 133 (285)
T TIGR03649 76 PPIPD--LAPPMIKFIDFARSKGVRRFVLLSASIIEKG------------GP--------AMGQVHAHLDSLGGVEYTVL 133 (285)
T ss_pred CCCCC--hhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------Cc--------hHHHHHHHHHhccCCCEEEE
Confidence 76432 233444444 35679999999998654321 01 123456777765 5 8999
Q ss_pred EeCceecCCCcH-HHHHHH-cCCc-cCCCCcccCcccHhhHhhcc
Q 024417 226 RLAGLYKADRGA-HVYWLQ-KGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 226 Rp~~vyG~~~~~-~~~~l~-~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
||+++|+..... ....+. .+.+ .+.++..++|||++|+|+++
T Consensus 134 Rp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~ 178 (285)
T TIGR03649 134 RPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVA 178 (285)
T ss_pred eccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHH
Confidence 999998653211 111122 2333 35578899999999999875
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.9e-16 Score=140.06 Aligned_cols=150 Identities=15% Similarity=0.064 Sum_probs=105.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc---chhh-------------hcCCceeeccCcc---------
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH---HDEL-------------INMGITPSLKWTE--------- 138 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~---~~~l-------------~~~~i~~~~~D~~--------- 138 (268)
++||+||+ ||+|++|+++|+.+. ..+|++++|..+. ...| ....++++.+|.+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 47999997 999999999999983 3699999996541 1111 1235667777651
Q ss_pred ----ccCCCCEEEEccCCCCC--------CChHHHHHHHH-HHhc-CCCeEEEEccCeeecCCCC----CCCCCCCCCCC
Q 024417 139 ----ATQKFPYVIFCAPPSRS--------LDYPGDVRLAA-LSWN-GEGSFLFTSSSAIYDCSDN----GACDEDSPVVP 200 (268)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~--------~~~~~~~~~~~-~~~~-gvkr~V~~SS~~vYg~~~~----~~~~E~~~~~p 200 (268)
....+|.|||+++..+. +..+.++++++ ++.. ..|.+.|+||++|+..... ...+|+++..-
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 35679999999986441 22577788776 3344 4677999999999865322 12222233211
Q ss_pred ---CCCCHHHHHHHHHHHHHHHcC-----ceEEEeCceecCCC
Q 024417 201 ---IGRSPRTDVLLKAEKVILEFG-----GCVLRLAGLYKADR 235 (268)
Q Consensus 201 ---~~~~~y~~sK~~aE~~l~~~~-----~tIlRp~~vyG~~~ 235 (268)
...++|+++|+.+|.++++.+ ++|+|||.|.|+..
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~ 202 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSR 202 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCc
Confidence 112689999999999999985 79999999999854
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=149.05 Aligned_cols=185 Identities=15% Similarity=0.139 Sum_probs=122.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcc---hhh----h--------------------cCCceee
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHH---DEL----I--------------------NMGITPS 133 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~---~~l----~--------------------~~~i~~~ 133 (268)
..++|||||+ ||||.+|+++|++..|+. +|+++.|..+.. +.+ . ...+.++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 4578999997 999999999999873333 789999964321 111 0 0124445
Q ss_pred ccCcc-------------ccCCCCEEEEccCCCCCC-C-------hHHHHHHHHH--Hh-cCCCeEEEEccCeeecCCCC
Q 024417 134 LKWTE-------------ATQKFPYVIFCAPPSRSL-D-------YPGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSDN 189 (268)
Q Consensus 134 ~~D~~-------------~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~~~~--~~-~gvkr~V~~SS~~vYg~~~~ 189 (268)
.+|.. ...++|+|||+|+....+ + .+.++.+++. ++ .+.++|||+||.+|||...+
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G 277 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG 277 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence 55531 236799999999975432 2 2344555552 23 35789999999999986532
Q ss_pred CCCCCCCCC----------------------C-----------------------------------CCCCCHHHHHHHH
Q 024417 190 GACDEDSPV----------------------V-----------------------------------PIGRSPRTDVLLK 212 (268)
Q Consensus 190 ~~~~E~~~~----------------------~-----------------------------------p~~~~~y~~sK~~ 212 (268)
.+.|..-+ + ....+.|..+|..
T Consensus 278 -~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~l 356 (605)
T PLN02503 278 -RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAM 356 (605)
T ss_pred -eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHH
Confidence 22222100 0 0112689999999
Q ss_pred HHHHHHHcC----ceEEEeCce----------ecCCCc---HHHHHHHcCCc---cCCCCcccCcccHhhHhhccC
Q 024417 213 AEKVILEFG----GCVLRLAGL----------YKADRG---AHVYWLQKGTV---DSRPDHILNLIHYELPSRLQC 268 (268)
Q Consensus 213 aE~~l~~~~----~tIlRp~~v----------yG~~~~---~~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai~ 268 (268)
+|+++++.. .+|+||+.| |+++.. +......+|.+ .++++...|+|++|.++.+++
T Consensus 357 AE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i 432 (605)
T PLN02503 357 GEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATL 432 (605)
T ss_pred HHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHH
Confidence 999999764 799999999 655522 22222345543 578899999999999998863
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.4e-15 Score=148.64 Aligned_cols=152 Identities=18% Similarity=0.149 Sum_probs=102.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc------cccCCCCEEEEccCCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRSLD 157 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~------~~~~~~D~Vi~~a~~~~~~~ 157 (268)
|||||||+ ||||++|+++|+++ |++|++++|.+... ...+++++.+|. +.+.++|+|||+|+......
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~~ 75 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHDA---LDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAP 75 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhhc---ccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccch
Confidence 48999996 99999999999999 99999999875432 123456666554 24578999999998643221
Q ss_pred ---hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCce
Q 024417 158 ---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (268)
Q Consensus 158 ---~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~v 230 (268)
+..+..+++ +++.++ ++||+||. ||.. . .| ..+|+++..++ ++|+|++++
T Consensus 76 ~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~-------------~---~~----~~aE~ll~~~~~p~~ILR~~nV 132 (699)
T PRK12320 76 GGVGITGLAHVANAAARAGA-RLLFVSQA--AGRP-------------E---LY----RQAETLVSTGWAPSLVIRIAPP 132 (699)
T ss_pred hhHHHHHHHHHHHHHHHcCC-eEEEEECC--CCCC-------------c---cc----cHHHHHHHhcCCCEEEEeCcee
Confidence 345566665 345666 79999986 3321 0 11 14788887664 899999999
Q ss_pred ecCCCcHH----HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 231 YKADRGAH----VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 231 yG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
||++..+. ...+.+.. ..++...+||++|+++++
T Consensus 133 YGp~~~~~~~r~I~~~l~~~---~~~~pI~vIyVdDvv~al 170 (699)
T PRK12320 133 VGRQLDWMVCRTVATLLRSK---VSARPIRVLHLDDLVRFL 170 (699)
T ss_pred cCCCCcccHhHHHHHHHHHH---HcCCceEEEEHHHHHHHH
Confidence 99965431 11111111 123344569999999986
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.3e-15 Score=158.16 Aligned_cols=182 Identities=15% Similarity=0.163 Sum_probs=121.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC----CeEEEEeCCCCcchh---hh-------------cCCceeeccCc-----
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDE---LI-------------NMGITPSLKWT----- 137 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G----~~V~~~~R~~~~~~~---l~-------------~~~i~~~~~D~----- 137 (268)
.++|||||+ ||||++|+++|+++ + ++|+++.|....... +. ...++++.+|.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~--~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTR--RSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhc--CCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence 468999997 99999999999988 5 899999997543221 11 01355555553
Q ss_pred --------cccCCCCEEEEccCCCCCCC--------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC-----------
Q 024417 138 --------EATQKFPYVIFCAPPSRSLD--------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD----------- 188 (268)
Q Consensus 138 --------~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~----------- 188 (268)
+...++|+|||+|+...... .+.++.+++ +...++++|+|+||.++|+...
T Consensus 1049 gl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~ 1128 (1389)
T TIGR03443 1049 GLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQA 1128 (1389)
T ss_pred CcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhc
Confidence 13468999999998754321 234455555 2455789999999999997421
Q ss_pred -CCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCCCcH------HHHHHHcC----CccC
Q 024417 189 -NGACDEDSPVVP---IGRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGA------HVYWLQKG----TVDS 249 (268)
Q Consensus 189 -~~~~~E~~~~~p---~~~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~~~~------~~~~l~~g----~~~~ 249 (268)
...+.|+.+..+ ...+.|+.+|+.+|+++.++ + ++|+||+.|||+.... ....+.++ ...+
T Consensus 1129 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p 1208 (1389)
T TIGR03443 1129 GGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIP 1208 (1389)
T ss_pred cCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcC
Confidence 112444433211 11257999999999999765 2 7999999999985321 11122211 1134
Q ss_pred CCCcccCcccHhhHhhcc
Q 024417 250 RPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 250 ~g~~~~~~Ihv~DlA~ai 267 (268)
.....++|++++|+|+++
T Consensus 1209 ~~~~~~~~~~Vddva~ai 1226 (1389)
T TIGR03443 1209 NINNTVNMVPVDHVARVV 1226 (1389)
T ss_pred CCCCccccccHHHHHHHH
Confidence 456678999999999986
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=139.02 Aligned_cols=171 Identities=14% Similarity=0.086 Sum_probs=111.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---------------CCceeeccCc-------ccc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---------------MGITPSLKWT-------EAT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---------------~~i~~~~~D~-------~~~ 140 (268)
.++|||+|+ |+||++++++|+++ |++|++++|+.++...+.. .+++++.+|. +.+
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL 157 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL 157 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence 357999997 99999999999999 9999999998776543211 1245566665 257
Q ss_pred CCCCEEEEccCCCCCC--C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 141 QKFPYVIFCAPPSRSL--D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
.++|+|||+++..... + ...+..+++ +...+++|||++||.+.+.... .+. ..... ..|...
T Consensus 158 ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~~-~~~sk--~~~~~~ 230 (576)
T PLN03209 158 GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PAA-ILNLF--WGVLCW 230 (576)
T ss_pred cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----ccc-chhhH--HHHHHH
Confidence 8999999999864321 1 122344444 2456889999999987642110 111 11222 457778
Q ss_pred HHHHHHHHHHcC--ceEEEeCceecCCCcHHHHHHHcCCc-cCCCC-cccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKGTV-DSRPD-HILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~~--~tIlRp~~vyG~~~~~~~~~l~~g~~-~~~g~-~~~~~Ihv~DlA~ai 267 (268)
|..+|+++.+.+ +++||||+++++..... ..+.. ....+ .....+..+|||+++
T Consensus 231 KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~----~t~~v~~~~~d~~~gr~isreDVA~vV 288 (576)
T PLN03209 231 KRKAEEALIASGLPYTIVRPGGMERPTDAYK----ETHNLTLSEEDTLFGGQVSNLQVAELM 288 (576)
T ss_pred HHHHHHHHHHcCCCEEEEECCeecCCccccc----cccceeeccccccCCCccCHHHHHHHH
Confidence 999999999887 89999999998743211 01111 11111 122357888998875
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.1e-14 Score=142.93 Aligned_cols=136 Identities=17% Similarity=0.139 Sum_probs=91.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEE-EEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC---CC--
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIY-GQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR---SL-- 156 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~-~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~---~~-- 156 (268)
+|||||||+ ||||++|+++|.++ |++|. ...+ -.....+. .+. .-.++|+|||||+... .+
T Consensus 380 ~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~~~~-l~d~~~v~--------~~i-~~~~pd~Vih~Aa~~~~~~~~~~ 447 (668)
T PLN02260 380 SLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYGKGR-LEDRSSLL--------ADI-RNVKPTHVFNAAGVTGRPNVDWC 447 (668)
T ss_pred CceEEEECCCchHHHHHHHHHHhC--CCeEEeeccc-cccHHHHH--------HHH-HhhCCCEEEECCcccCCCCCChH
Confidence 468999997 99999999999999 99984 3222 11111110 000 1137899999998652 11
Q ss_pred --C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 024417 157 --D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCS------DNGACDEDSPVVPIGRSPRTDVLLKAEKVILE 219 (268)
Q Consensus 157 --~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~------~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~ 219 (268)
+ .+.+..+++ +++.+++ +|++||..||+.. .+.+++|++++.|. .+.|+++|+++|+++++
T Consensus 448 ~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~-~~~Yg~sK~~~E~~~~~ 525 (668)
T PLN02260 448 ESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT-GSFYSKTKAMVEELLRE 525 (668)
T ss_pred HhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCC-CChhhHHHHHHHHHHHh
Confidence 1 123344444 2456774 7788899998642 12368888766542 27899999999999988
Q ss_pred cC-ceEEEeCceecC
Q 024417 220 FG-GCVLRLAGLYKA 233 (268)
Q Consensus 220 ~~-~tIlRp~~vyG~ 233 (268)
+. ..++|+.++||.
T Consensus 526 ~~~~~~~r~~~~~~~ 540 (668)
T PLN02260 526 YDNVCTLRVRMPISS 540 (668)
T ss_pred hhhheEEEEEEeccc
Confidence 76 788899999964
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.7e-15 Score=131.39 Aligned_cols=163 Identities=17% Similarity=0.127 Sum_probs=107.1
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc--------CCcee----eccCc-------cccC--CC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN--------MGITP----SLKWT-------EATQ--KF 143 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~--------~~i~~----~~~D~-------~~~~--~~ 143 (268)
|||||+ |.||+.|+++|++. + .+++.++|++.+.-.++. .+++. +.+|. ..++ ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~--~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRY--GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCC--B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhc--CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 799996 99999999999998 6 489999998765433221 12332 35664 1455 99
Q ss_pred CEEEEccCCCCC---CC--------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHH
Q 024417 144 PYVIFCAPPSRS---LD--------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (268)
Q Consensus 144 D~Vi~~a~~~~~---~~--------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK 210 (268)
|+|||.|+..+. ++ .+-++++++ +.+.++++||++||.-. .+|. +-||.+|
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~Pt--nvmGatK 142 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPT--NVMGATK 142 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS----SHHHHHH
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCC--cHHHHHH
Confidence 999999998763 12 123445555 35679999999998432 3465 8999999
Q ss_pred HHHHHHHHHcC---------ceEEEeCceecCCCc--H-HHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 211 LKAEKVILEFG---------GCVLRLAGLYKADRG--A-HVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 211 ~~aE~~l~~~~---------~tIlRp~~vyG~~~~--~-~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|+++..++ .+++|+|+|.|.... + +..++++|.+ +..++..+=|..++|+++.+
T Consensus 143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lv 213 (293)
T PF02719_consen 143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLV 213 (293)
T ss_dssp HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHH
T ss_pred HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHH
Confidence 99999998874 489999999997654 2 3456788876 45677777788888888754
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.5e-13 Score=130.61 Aligned_cols=168 Identities=15% Similarity=0.103 Sum_probs=122.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhh----hc----CCceeeccCc-------cccCC--
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN----MGITPSLKWT-------EATQK-- 142 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l----~~----~~i~~~~~D~-------~~~~~-- 142 (268)
+..|+|||||+ |-||+.|++++++. +. +++.++|++.+...+ .. ..+.++.+|. .++.+
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~--~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKF--NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhc--CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCC
Confidence 34689999997 99999999999998 54 788899987664432 22 2355566664 25666
Q ss_pred CCEEEEccCCCCCC---C--------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 143 FPYVIFCAPPSRSL---D--------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~---~--------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
+|+|+|+|+..+.. . ++-++.|++ +.++++++||.+||.- .++|. |.||.+
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDK--------------AV~Pt--NvmGaT 389 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDK--------------AVNPT--NVMGAT 389 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCc--------------ccCCc--hHhhHH
Confidence 99999999977642 1 223444554 3568999999999832 24566 889999
Q ss_pred HHHHHHHHHHcC---------ceEEEeCceecCCCc--H-HHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEFG---------GCVLRLAGLYKADRG--A-HVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~~---------~tIlRp~~vyG~~~~--~-~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|++++.++ .+++|+|+|.|.... | +...+++|.+ +.+++-.+=|..+.|+++..
T Consensus 390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LV 461 (588)
T COG1086 390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLV 461 (588)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHH
Confidence 999999998763 489999999998654 3 3446777776 45667666678888877653
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.50 E-value=4.8e-13 Score=116.54 Aligned_cols=169 Identities=9% Similarity=0.012 Sum_probs=106.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc------CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~------~~i~~~~~D~---~-----------~~~~ 142 (268)
++++||+|+ |+||++|+++|+++ |++|++++|++++.+.+.. ..+..+.+|. + .+..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999997 99999999999999 9999999998765443321 1344455553 1 2457
Q ss_pred CCEEEEccCCCCCC-----C---hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL-----D---YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|+|||+++..... + +.+ + ++.++ .++.+++++|++||...+.... ..
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~ 147 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP-----------FK 147 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC-----------CC
Confidence 89999999854321 1 111 1 11111 1345678999999976554211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHH-HHH-cCC--------ccCCCCcccCcccHhh
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQ-KGT--------VDSRPDHILNLIHYEL 262 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~-~l~-~g~--------~~~~g~~~~~~Ihv~D 262 (268)
..|+.+|...|.+.+.+ + .+++||+.++++....... ... .+. ....+....+++|++|
T Consensus 148 --~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 225 (255)
T TIGR01963 148 --SAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE 225 (255)
T ss_pred --chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence 46888888777666533 3 6889999999874321111 111 010 0123446678999999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 226 ~a~~~ 230 (255)
T TIGR01963 226 VAETA 230 (255)
T ss_pred HHHHH
Confidence 99875
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1e-12 Score=115.08 Aligned_cols=169 Identities=9% Similarity=-0.017 Sum_probs=106.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~~ 142 (268)
++++||||+ |+||++++++|+++ |++|++++|++++.+.+ ...+ +..+.+|. + ....
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 578999997 99999999999999 99999999987554332 2222 33445554 1 1246
Q ss_pred CCEEEEccCCCCCC-----C---hH-------HH----HHHHH--H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL-----D---YP-------GD----VRLAA--L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~-------~~----~~~~~--~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+++..... + +. .+ ++.++ . +..+.+++|++||...+... .+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~-----------~~ 153 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS-----------PL 153 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC-----------CC
Confidence 99999999864321 1 11 11 11222 1 34567899999996433211 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-HHHHHHc-C--------CccCCCCcccCcccHh
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWLQK-G--------TVDSRPDHILNLIHYE 261 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-~~~~l~~-g--------~~~~~g~~~~~~Ihv~ 261 (268)
. +.|+.+|...|.+++.+ + .+++||+.++++.... +...... + +.+..+.....|++++
T Consensus 154 ~--~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (262)
T PRK13394 154 K--SAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVE 231 (262)
T ss_pred C--cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHH
Confidence 2 56888898888766543 2 6899999999885321 1111110 0 0122344567899999
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+++++
T Consensus 232 dva~a~ 237 (262)
T PRK13394 232 DVAQTV 237 (262)
T ss_pred HHHHHH
Confidence 999875
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=9.1e-13 Score=115.00 Aligned_cols=169 Identities=11% Similarity=-0.032 Sum_probs=105.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~~~ 142 (268)
+++|||+|+ |+||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + ....
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999996 99999999999999 99999999987654332 11 1344555654 1 1347
Q ss_pred CCEEEEccCCCCCCC--------hH-------HH----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YP-------GD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++...... +. .+ ++.++ .++.+.++||++||...+... .+.
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~ 150 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGS-----------AGK 150 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------CCc
Confidence 999999998543211 11 11 11222 134568899999997654321 112
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHH--cCC--------ccCCCCcccCcccHhh
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQ--KGT--------VDSRPDHILNLIHYEL 262 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~--~g~--------~~~~g~~~~~~Ihv~D 262 (268)
+.|+.+|...|.+.+.+ + ++++||+.++++.......... .+. .+........+++++|
T Consensus 151 --~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (258)
T PRK12429 151 --AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEE 228 (258)
T ss_pred --chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHH
Confidence 56888887777655433 2 6899999999875321111110 010 0112234467999999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 229 ~a~~~ 233 (258)
T PRK12429 229 IADYA 233 (258)
T ss_pred HHHHH
Confidence 99874
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.3e-13 Score=118.01 Aligned_cols=168 Identities=19% Similarity=0.146 Sum_probs=110.5
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+|+|+ |.+|+++++.|++. +++|++++|++.+ .+.+...|++.+..|. ++++++|+||.+.+.....
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~ 78 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPS 78 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCC
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhh
Confidence 789997 99999999999998 9999999998743 4556678888887765 2689999999888865422
Q ss_pred ChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCceec
Q 024417 157 DYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYK 232 (268)
Q Consensus 157 ~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~vyG 232 (268)
..+...+++ +++.|+++||+.|-...+. +.....|. .+.-..|...|+++++.+ +|++|++.++.
T Consensus 79 -~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~--~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e 147 (233)
T PF05368_consen 79 -ELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPE--IPHFDQKAEIEEYLRESGIPYTIIRPGFFME 147 (233)
T ss_dssp -HHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTH--HHHHHHHHHHHHHHHHCTSEBEEEEE-EEHH
T ss_pred -hhhhhhhHHHhhhccccceEEEEEeccccc--------cccccccc--chhhhhhhhhhhhhhhccccceeccccchhh
Confidence 233333443 3567899999866433321 11111121 233457889999999988 89999998775
Q ss_pred CCCcHHHHH--HHcCC--c--cCCCCcccCcc-cHhhHhhcc
Q 024417 233 ADRGAHVYW--LQKGT--V--DSRPDHILNLI-HYELPSRLQ 267 (268)
Q Consensus 233 ~~~~~~~~~--l~~g~--~--~~~g~~~~~~I-hv~DlA~ai 267 (268)
.-..+.... +.... . ...++....++ ..+|++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~v 189 (233)
T PF05368_consen 148 NLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAV 189 (233)
T ss_dssp HHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHH
T ss_pred hhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHH
Confidence 321111110 11211 1 34556566665 999999875
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=8.8e-13 Score=109.12 Aligned_cols=175 Identities=15% Similarity=0.105 Sum_probs=118.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc---Cc----cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK---WT----EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~---D~----~~~~~~D~Vi~~a~~~~~~ 156 (268)
|||.|+|+ |.+|++++++++++ ||+|++++|++.+.... .++..... |+ +.+.+.|+||...+....+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~ 76 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASD 76 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCC
Confidence 58999998 99999999999999 99999999999887554 34444443 33 3688999999887765332
Q ss_pred C---hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHH--HHHHHcC---ceEEE
Q 024417 157 D---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE--KVILEFG---GCVLR 226 (268)
Q Consensus 157 ~---~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE--~~l~~~~---~tIlR 226 (268)
. +.+..+.++ .+..++.|++.++..+..--..+ .--.|+|.-|. ..|...+..+| +.|+.-. ||.+-
T Consensus 77 ~~~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g-~rLvD~p~fP~--ey~~~A~~~ae~L~~Lr~~~~l~WTfvS 153 (211)
T COG2910 77 NDELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEG-TRLVDTPDFPA--EYKPEALAQAEFLDSLRAEKSLDWTFVS 153 (211)
T ss_pred hhHHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCC-ceeecCCCCch--hHHHHHHHHHHHHHHHhhccCcceEEeC
Confidence 1 333333333 35668999999998764322222 22334454454 45677777787 4555443 99999
Q ss_pred eCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 227 LAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 227 p~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.++-|+.....+++....+. .....-++|..+|-|-++
T Consensus 154 Paa~f~PGerTg~yrlggD~ll-~n~~G~SrIS~aDYAiA~ 193 (211)
T COG2910 154 PAAFFEPGERTGNYRLGGDQLL-VNAKGESRISYADYAIAV 193 (211)
T ss_pred cHHhcCCccccCceEeccceEE-EcCCCceeeeHHHHHHHH
Confidence 9999999765444455443332 223344678888888765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.7e-12 Score=110.02 Aligned_cols=168 Identities=12% Similarity=-0.029 Sum_probs=104.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhh----hc--CCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DEL----IN--MGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l----~~--~~i~~~~~D~---~-----------~ 139 (268)
++|++|||+|+ |+||++|+++|+++ |++|+++.|...+. +.+ .. ..+..+.+|. + .
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 34678999997 99999999999999 99998877765432 111 11 2355555654 1 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..++|+|||+++...... +.+. ..++. .++.+.+++|++||...+...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~----------- 150 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGW----------- 150 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCC-----------
Confidence 257899999998532211 1111 11111 134578999999998776421
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
... ..|+.+|...|.++..+ + ++++||+.++|+...... ........ ......+++.+|+++++
T Consensus 151 ~~~--~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dva~~~ 224 (249)
T PRK12825 151 PGR--SNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDA---ETPLGRSGTPEDIARAV 224 (249)
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhc---cCCCCCCcCHHHHHHHH
Confidence 112 57888998877665432 3 799999999998543211 11111100 11223389999999875
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.8e-12 Score=112.59 Aligned_cols=165 Identities=12% Similarity=0.010 Sum_probs=105.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcC--CceeeccCcc--------------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM--GITPSLKWTE--------------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~--~i~~~~~D~~--------------~~~ 141 (268)
+.++|||+|+ |+||++++++|+++ |++|++++|++++... +... .+..+.+|.. ...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3568999997 99999999999999 9999999998654322 2222 2445555541 124
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+++...... +.+ +..+++ ..+.+.++||++||...++. +...
T Consensus 83 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~----------~~~~ 152 (251)
T PRK12826 83 RLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV----------GYPG 152 (251)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhcc----------CCCC
Confidence 7999999997643211 111 111111 13456789999999866521 1112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH-----HHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-----YWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~-----~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
. ..|+.+|...|.+++.+ + .+++||+.++|+...... ..+..+.+ ...+++++|+|++
T Consensus 153 ~--~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~ 224 (251)
T PRK12826 153 L--AHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIP------LGRLGEPEDIAAA 224 (251)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCC------CCCCcCHHHHHHH
Confidence 2 57999998888776653 2 689999999998542211 11111111 1257899999887
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 225 ~ 225 (251)
T PRK12826 225 V 225 (251)
T ss_pred H
Confidence 5
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.3e-12 Score=111.44 Aligned_cols=136 Identities=15% Similarity=0.037 Sum_probs=91.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
++++||||+ |+||++++++|+++ |++|+++.|++++.+.+.. .++..+.+|. + ...++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367999997 99999999999999 9999999998765554432 2455555554 1 1356899
Q ss_pred EEEccCCCCCCC--------hH-------HHHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~-------~~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+...... +. .+..+++ .++.+.+++|++||...+.. ..+. +
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~--~ 146 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA-----------YPGF--S 146 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC-----------CCCC--c
Confidence 999998643211 11 1111221 13456789999999653221 1122 6
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCce---ecCC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGL---YKAD 234 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~v---yG~~ 234 (268)
.|+.+|+..|.+++.+ + ++++||+.+ ||++
T Consensus 147 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 147 LYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 8999999998776543 3 689999988 6653
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.4e-12 Score=111.58 Aligned_cols=165 Identities=18% Similarity=0.078 Sum_probs=117.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
++|||+|+ |++|++++++|+++ |++|+++.|++++...+. .++++...|. ..+.+.|.++++.+....+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~ 77 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGS 77 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccc
Confidence 47999997 99999999999999 999999999998887776 7788887775 2578999999998854311
Q ss_pred C--h---HHHHHHHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeC
Q 024417 157 D--Y---PGDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (268)
Q Consensus 157 ~--~---~~~~~~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~ 228 (268)
. . ...+.+... ...+++++++.|...... ..+ ..|.+.|...|+.+.+.+ ++++|+.
T Consensus 78 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~------------~~~---~~~~~~~~~~e~~l~~sg~~~t~lr~~ 142 (275)
T COG0702 78 DAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADA------------ASP---SALARAKAAVEAALRSSGIPYTTLRRA 142 (275)
T ss_pred cchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCC------------CCc---cHHHHHHHHHHHHHHhcCCCeEEEecC
Confidence 1 1 112222221 123588899998644311 112 578899999999999998 7999977
Q ss_pred ceecCCCcH-HHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 229 GLYKADRGA-HVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 229 ~vyG~~~~~-~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...... .......+.+ ...+....+++..+|+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~ 183 (275)
T COG0702 143 AFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEAL 183 (275)
T ss_pred eeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHH
Confidence 777654333 2223344443 23344488999999998764
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.5e-12 Score=110.61 Aligned_cols=169 Identities=15% Similarity=0.080 Sum_probs=104.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-------ccCCCCEEEEcc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-------ATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-------~~~~~D~Vi~~a 150 (268)
..++++|+|+ |+||+++++.|+++ |++|++++|++++.+++.. .+.+.+.+|. + ....+|+|||++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence 3468999997 99999999999999 9999999998766544432 2445555554 1 124689999999
Q ss_pred CCCCCCC--------hHHH-------HHHHH---H---HhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 151 PPSRSLD--------YPGD-------VRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 151 ~~~~~~~--------~~~~-------~~~~~---~---~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
+...... +.+. ..+++ . .+.+ .++||++||...|.... +. ..|+.
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~--~~y~~ 152 (245)
T PRK07060 86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-----------DH--LAYCA 152 (245)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----------CC--cHhHH
Confidence 8643211 1111 11111 1 1222 47899999976654211 12 57999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|...|.+++.+ + .+.+||+.++++.... .......... ........+++.+|+|+++
T Consensus 153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~~~ 220 (245)
T PRK07060 153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPM-LAAIPLGRFAEVDDVAAPI 220 (245)
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHH-HhcCCCCCCCCHHHHHHHH
Confidence 999999877544 2 5888999999874321 0000000000 0111234588999999875
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-11 Score=107.81 Aligned_cols=173 Identities=13% Similarity=0.105 Sum_probs=104.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c----CCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~----~~i~~~~~D~---~-----------~~ 140 (268)
.++|||+|+ |.||++++++|.++ |++|+++.|++++.+.+. . ..+.++.+|. + ..
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 468999997 99999999999999 999999999876543321 1 1233445554 1 12
Q ss_pred CCCCEEEEccCCCCC-------C-C---hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS-------L-D---YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~-------~-~---~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
..+|+|||+|+.... + + +... ++.++ .++.+.+++|++||...+.... .+..|+.
T Consensus 82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~ 160 (256)
T PRK09186 82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEIYEGT 160 (256)
T ss_pred CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chhcccc
Confidence 358999999964311 0 0 1111 11111 1345678999999976543221 1223444
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.... ..|+.+|...|.+.+.. + +++++|+.++++........... .. ....+++.+|+|+++
T Consensus 161 ~~~~~--~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~dva~~~ 232 (256)
T PRK09186 161 SMTSP--VEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKK-CC-----NGKGMLDPDDICGTL 232 (256)
T ss_pred ccCCc--chhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHHHHHHHh-cC-----CccCCCCHHHhhhhH
Confidence 33222 47999998888776432 2 68999999887643222111111 11 112468889998875
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.6e-12 Score=107.68 Aligned_cols=159 Identities=11% Similarity=0.009 Sum_probs=102.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch----hhhcCCceeeccCc---c-----------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELINMGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~----~l~~~~i~~~~~D~---~-----------~~~~~D 144 (268)
.+++||+|+ |+||++++++|+++ |++|++++|++++.. .+...+.+.+.+|. + ...++|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 468999997 99999999999999 999999999875532 22233445444543 1 234799
Q ss_pred EEEEccCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+++...... +.+. ..+++ ..+.+++++|++||...|+.. .+.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~-- 151 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG-----------PGM-- 151 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-----------CCc--
Confidence 9999998532110 1111 11111 124568899999998876532 112
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+++.. + +.++||+.++++.... .. .......+++++|+|+++
T Consensus 152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~--------~~--~~~~~~~~~~~~dva~~~ 214 (239)
T PRK12828 152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA--------DM--PDADFSRWVTPEQIAAVI 214 (239)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh--------cC--CchhhhcCCCHHHHHHHH
Confidence 56888888776666432 2 6889999999873211 00 011223378899998764
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.3e-11 Score=106.47 Aligned_cols=167 Identities=10% Similarity=-0.050 Sum_probs=102.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
+++|||+|+ |+||.+++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ....
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 99999999987654332 212 234444554 1 1346
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++...... +.+ ...+++ ..+.+++++|++||...... ..+.
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-----------~~~~ 151 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-----------NPGQ 151 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC-----------CCCC
Confidence 799999997643211 111 111111 13456789999998653221 1122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|...+.+ + .+++||+.++++...........+.. .......+++.+|+|+++
T Consensus 152 --~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva~~~ 222 (246)
T PRK05653 152 --TNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEIL--KEIPLGRLGQPEEVANAV 222 (246)
T ss_pred --cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHH--hcCCCCCCcCHHHHHHHH
Confidence 56888888776655443 2 68999999999865322211111111 111225578889998765
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.1e-11 Score=109.77 Aligned_cols=136 Identities=16% Similarity=0.188 Sum_probs=93.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
+++++|||+ |.||++++++|.++ |++|++++|++++.+.+...+++.+.+|. + ...++|+|||
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 578999997 99999999999999 99999999987766655555666666664 1 1247999999
Q ss_pred ccCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+...... +.. + ++.++ .++.+.+++|++||.+.+... |. ...|+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~~-~~~Y~ 147 (273)
T PRK06182 81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT------------PL-GAWYH 147 (273)
T ss_pred CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC------------CC-ccHhH
Confidence 998643211 111 1 11121 134567899999996532110 11 14699
Q ss_pred HHHHHHHHHHHH-------cC--ceEEEeCceecCC
Q 024417 208 DVLLKAEKVILE-------FG--GCVLRLAGLYKAD 234 (268)
Q Consensus 208 ~sK~~aE~~l~~-------~~--~tIlRp~~vyG~~ 234 (268)
.+|...|.+.+. .+ ++++||+.+..+.
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 999988876432 23 6899999998764
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.5e-11 Score=107.78 Aligned_cols=169 Identities=10% Similarity=0.029 Sum_probs=104.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.++.++|+|+ |+||++++++|.++ |++|++++|+.++.+.+ ... .+..+.+|. + ...
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3568999997 99999999999999 99999999876543322 111 234444553 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+...... +.+. ..++. ....+..+||++||...|.... +
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~ 155 (274)
T PRK07775 87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP-----------H 155 (274)
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----------C
Confidence 7899999998643211 1111 11111 1234567899999987765321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC-CCcH----HHHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA-DRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~-~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
. ..|+.+|...|.+++.+ + .+++|||.+..+ +... ....+.....+ .+.....++|++|+|++
T Consensus 156 ~--~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~dva~a 232 (274)
T PRK07775 156 M--GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKW-GQARHDYFLRASDLARA 232 (274)
T ss_pred c--chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHh-cccccccccCHHHHHHH
Confidence 2 57999999999877653 3 689999987543 2211 00011110011 12234568999999998
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 233 ~ 233 (274)
T PRK07775 233 I 233 (274)
T ss_pred H
Confidence 6
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.4e-11 Score=107.32 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~~~ 143 (268)
.++++|+|+ |.||++|+++|+++ |++|+++.|+.+....... ..+..+.+|. + ...++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999997 99999999999999 9999999998654433211 1244555554 1 12589
Q ss_pred CEEEEccCCCCCCC----hHHHH---------------HHHH--HHhcCCCeEEEEccCee-ecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD----YPGDV---------------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~~----~~~~~---------------~~~~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+++...... ..+.. +.++ .++.+.+++|++||... |+.. ..
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------------~~ 150 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR------------GR 150 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC------------Cc
Confidence 99999998643210 01111 1111 13456789999999754 3321 12
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+++.+ + .+++||+.++++.
T Consensus 151 --~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 151 --AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 57999998888776654 3 6889999999874
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.2e-11 Score=105.79 Aligned_cols=169 Identities=9% Similarity=-0.042 Sum_probs=103.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~~~ 143 (268)
.+++||+|+ |+||++++++|+++ |++|++++|++++...+.. ..+..+.+|. + ....+
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 99999999999999 9999999998765443321 1244555654 1 13478
Q ss_pred CEEEEccCCCCCC----C-----hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL----D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~----~-----~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+++..... + +.+. ++.++ ..+.+.++||++||...+.+.. +.
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~ 151 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP-----------GL 151 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC-----------Cc
Confidence 9999999863211 0 1111 11111 1235678999999987765321 22
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHH--HHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYW--LQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~--l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ++.+||+.+..+........ ...............+++++|+|+++
T Consensus 152 --~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 226 (251)
T PRK07231 152 --GWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAA 226 (251)
T ss_pred --hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence 57888998877666543 2 58899998866532111100 00000011112234578999998865
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=2.5e-11 Score=106.41 Aligned_cols=169 Identities=12% Similarity=0.008 Sum_probs=102.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----CCceeeccCc---c-----------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~~i~~~~~D~---~-----------~~~~~D 144 (268)
.+++||+|+ |+||++++++|+++ |++|++++|+++..+.+.. ..+..+.+|. + ...++|
T Consensus 11 ~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999997 99999999999999 9999999998665444322 1234455553 1 135799
Q ss_pred EEEEccCCCCC-CC--------hHH-------HHHHHH------HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-LD--------YPG-------DVRLAA------LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~-------~~~~~~------~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|||+++.... .. +.+ ....++ ....+. +++|++||...+... ...
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~-----------~~~ 157 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY-----------PGR 157 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC-----------CCC
Confidence 99999986521 10 111 111111 122344 678888875432110 012
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHH--cCCc-------cCCCCcccCcccHhhH
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQ--KGTV-------DSRPDHILNLIHYELP 263 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~--~g~~-------~~~g~~~~~~Ihv~Dl 263 (268)
..|+.+|...|.+++.. + ++++||+.++|+.......... .+.. .........+++++|+
T Consensus 158 --~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 235 (264)
T PRK12829 158 --TPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDI 235 (264)
T ss_pred --chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHH
Confidence 46899999888776653 2 6899999999985432111100 0110 0001122358999999
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 236 a~~~ 239 (264)
T PRK12829 236 AATA 239 (264)
T ss_pred HHHH
Confidence 9875
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.7e-11 Score=105.01 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=85.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhh----hc---CCceeeccCc---c-----------ccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDEL----IN---MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l----~~---~~i~~~~~D~---~-----------~~~ 141 (268)
++|||+|+ |+||++++++|+++ |++|++++|+.++ .+.+ .. ..+..+.+|. + .+.
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 68999997 99999999999999 9999999986432 2221 11 2344555664 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hH-------HHHHHHHH---H--hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YP-------GDVRLAAL---S--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~-------~~~~~~~~---~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.+|+|||+++...... +. .+..+++. . ......++.+++. .|+.+..+.
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 153 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI-----------HAERPLKGY 153 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh-----------hhcCCCCCc
Confidence 6899999998532110 11 11112211 0 1112345554431 123344454
Q ss_pred CCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecCCC
Q 024417 202 GRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKADR 235 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~~~ 235 (268)
..|+.+|...|.+++.+. .+++||+.++|+..
T Consensus 154 --~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~ 193 (249)
T PRK09135 154 --PVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPED 193 (249)
T ss_pred --hhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccc
Confidence 789999999998887542 68999999999864
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.9e-11 Score=105.64 Aligned_cols=168 Identities=13% Similarity=0.007 Sum_probs=103.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-------c-----cCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------A-----TQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-------~-----~~~~D~Vi 147 (268)
+++|+|+|+ |+||.+++++|+++ |++|++++|++++.+.+...+++.+.+|. + . ....|.++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 357999997 99999999999999 99999999988776655555666665553 1 1 14679999
Q ss_pred EccCCCCCCC--------hHH-------HHHH----HH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSLD--------YPG-------DVRL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~-------~~~~----~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+++...... +.+ +..+ ++ ..+.+.+++|++||...+... ... ..|
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~--~~Y 146 (256)
T PRK08017 80 NNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST-----------PGR--GAY 146 (256)
T ss_pred ECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC-----------CCc--cHH
Confidence 9998532110 111 1111 11 134567899999996432211 112 579
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|...|.+.+.+ + ++++||+.+..+-..... ....... ...+...+.+++.+|+++++
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 216 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVN-QTQSDKPVENPGIAARFTLGPEAVVPKL 216 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhccc-chhhccchhhhHHHhhcCCCHHHHHHHH
Confidence 99999998765432 2 688899877543111000 0000111 11122334579999998875
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.1e-11 Score=103.33 Aligned_cols=163 Identities=14% Similarity=0.059 Sum_probs=98.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c----cc---CCCCEEEEc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----AT---QKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~----~~---~~~D~Vi~~ 149 (268)
+||++||+|+ |+||++++++|+++ ++|++++|+.++.+.+.. .+++++.+|. + .+ .++|+|||+
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 3578999997 99999999999876 889999998665443322 2456666664 1 22 369999999
Q ss_pred cCCCCCC---C-----hHH-------H----HHHHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 150 APPSRSL---D-----YPG-------D----VRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 150 a~~~~~~---~-----~~~-------~----~~~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
++..... + +.+ . .++++. .+.+.+++|++||...++... +. ..|+.+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~~--~~y~~~ 145 (227)
T PRK08219 79 AGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP-----------GW--GSYAAS 145 (227)
T ss_pred CCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC-----------CC--chHHHH
Confidence 9864321 0 111 0 111111 123457999999987654221 12 578889
Q ss_pred HHHHHHHHHHcC--------ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEFG--------GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~~--------~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|...|.+++... +..++|+.+.++... .+..+. +.......+++.+|+|+++
T Consensus 146 K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~----~~~~~~--~~~~~~~~~~~~~dva~~~ 205 (227)
T PRK08219 146 KFALRALADALREEEPGNVRVTSVHPGRTDTDMQR----GLVAQE--GGEYDPERYLRPETVAKAV 205 (227)
T ss_pred HHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh----hhhhhh--ccccCCCCCCCHHHHHHHH
Confidence 988887665431 455566655433211 111111 0111224579999999886
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.1e-11 Score=106.51 Aligned_cols=135 Identities=11% Similarity=0.044 Sum_probs=91.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC---CceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~---~i~~~~~D~---~-----------~~~~~D~ 145 (268)
+++|||||+ |+||++++++|+++ |++|++++|++++...+... .+..+.+|. + ....+|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 99999999987765544332 344445553 1 1246899
Q ss_pred EEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+...... +.+ +..++. .++.+.+++|++||...+... .+. .
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~-----------~~~--~ 148 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITM-----------PGI--G 148 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCC-----------CCc--c
Confidence 999998643211 111 111111 123456799999997654321 122 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+++.+ + ++++||+.++++
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD 186 (277)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence 7999999888766543 3 689999999765
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.1e-11 Score=108.15 Aligned_cols=134 Identities=11% Similarity=0.126 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--------CCceeeccCc---c----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--------~~i~~~~~D~---~----------~~~ 141 (268)
++++||||+ |+||++++++|+++ |++|++++|+++..+.+.. ..++.+.+|. + ...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcC
Confidence 457899997 99999999999999 9999999998765433211 1344555554 1 124
Q ss_pred CCCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhcCCCeEEEEccCee-ecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~-------~~~~~~------~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+++..... + +.+ +..+++ .++.+.+++|++||... ++..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------ 148 (280)
T PRK06914 81 RIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP------------ 148 (280)
T ss_pred CeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC------------
Confidence 689999999854321 1 111 111111 13456789999998643 3311
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. ..|+.+|...|.+++.+ + ++++||+.++++
T Consensus 149 ~~--~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 189 (280)
T PRK06914 149 GL--SPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTN 189 (280)
T ss_pred CC--chhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccc
Confidence 22 57899999888776543 3 689999999876
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.2e-11 Score=103.38 Aligned_cols=165 Identities=9% Similarity=0.045 Sum_probs=102.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----CCceeeccCc---c-----------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~~i~~~~~D~---~-----------~~~~~D 144 (268)
++++||+|+ |+||+.++++|+++ |++|++++|++++.+.+.. ..++.+.+|. + ...++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467999997 99999999999999 9999999998765443321 2345555554 1 124689
Q ss_pred EEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+++...... +...+ ..++ ..+.+.+++|++||...+... ..
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~-- 145 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL------------GH-- 145 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC------------CC--
Confidence 9999998543211 11111 1111 123456789999995432110 01
Q ss_pred CHHHHHHHHHHHHHHHcC---------ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEFG---------GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+++.+. ..++||+.++++..... ....... .......+|+|++|+++++
T Consensus 146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~d~a~~~ 219 (257)
T PRK07074 146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEEL---KKWYPLQDFATPDDVANAV 219 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHH---HhcCCCCCCCCHHHHHHHH
Confidence 358889988887776542 58899999988742110 0011100 0122346789999999875
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=5e-11 Score=106.08 Aligned_cols=135 Identities=13% Similarity=0.126 Sum_probs=94.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-------c-----cCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------A-----TQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-------~-----~~~~D~Vi 147 (268)
+++|+|||+ |.||++++++|.++ |++|++++|++++.+.+...+++.+.+|. + . ....|+||
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 467999997 99999999999999 99999999998777666656677666664 1 1 13689999
Q ss_pred EccCCCCCC---C-----hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSL---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~---~-----~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+|+..... + +.+ + ++.++ .++.+..++|++||...+.. ..+. ..|
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~~--~~Y 148 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-----------MKYR--GAY 148 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC-----------CCcc--chH
Confidence 999854321 1 110 1 12222 23456789999999643321 1122 689
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+.+|...|.+.+.. + +++++||.+-.+
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 99999999876543 3 689999988654
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.4e-11 Score=108.35 Aligned_cols=165 Identities=16% Similarity=0.101 Sum_probs=113.9
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchhhhcCC----ceeeccC---c----cccCCCCEEEEccCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMG----ITPSLKW---T----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~l~~~~----i~~~~~D---~----~~~~~~D~Vi~~a~~~ 153 (268)
..|.|+ ||+|+.++.+|.+. |.||++--|..+ ...+++..| +-+...| . ++++...+||++.+..
T Consensus 64 aTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd 141 (391)
T KOG2865|consen 64 ATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRD 141 (391)
T ss_pred EEEecccccccHHHHHHHhhc--CCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeeccc
Confidence 335697 99999999999999 999999888643 333443332 2222233 3 2688999999999864
Q ss_pred CCC------C-hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--c
Q 024417 154 RSL------D-YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (268)
Q Consensus 154 ~~~------~-~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~ 222 (268)
-.. | ++...+.++ .++.|+.|||++|..+. + -..+ +-|-++|.++|..+++.- .
T Consensus 142 ~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lga---n---------v~s~---Sr~LrsK~~gE~aVrdafPeA 206 (391)
T KOG2865|consen 142 YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGA---N---------VKSP---SRMLRSKAAGEEAVRDAFPEA 206 (391)
T ss_pred cccCCcccccccchHHHHHHHHHHhhChhheeehhhccc---c---------ccCh---HHHHHhhhhhHHHHHhhCCcc
Confidence 321 1 233333333 46789999999998551 1 1112 578889999999999875 8
Q ss_pred eEEEeCceecCCCcHHHHH---HH-cCCc--cCCC-CcccCcccHhhHhhccC
Q 024417 223 CVLRLAGLYKADRGAHVYW---LQ-KGTV--DSRP-DHILNLIHYELPSRLQC 268 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~~~---l~-~g~~--~~~g-~~~~~~Ihv~DlA~ai~ 268 (268)
||+||+.+||..+..+.++ +. -|.+ +..| ...-..||+-|+|++|+
T Consensus 207 tIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~Iv 259 (391)
T KOG2865|consen 207 TIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIV 259 (391)
T ss_pred eeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHH
Confidence 9999999999977655443 22 2333 3444 46677899999999873
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.7e-11 Score=104.38 Aligned_cols=167 Identities=14% Similarity=0.024 Sum_probs=103.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
|++|||+|+ |+||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ...+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 99999999986543322 111 234445554 1 1347
Q ss_pred CCEEEEccCCCCCC------C---hHHHH-------HHHH---H--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL------D---YPGDV-------RLAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~------~---~~~~~-------~~~~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|+|||+++..... + +.+.+ .+++ . ...+.+++|++||...|... .+.
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 147 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV-----------PTR 147 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC-----------CCc
Confidence 89999999864321 1 11111 1111 0 12345789999997766421 122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.. + +++++|+.+..+...... -..+.. ...+.....+++++|+|+++
T Consensus 148 --~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i 219 (263)
T PRK06181 148 --SGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRAL--DGDGKPLGKSPMQESKIMSAEECAEAI 219 (263)
T ss_pred --cHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhc--cccccccccccccccCCCCHHHHHHHH
Confidence 57999999888776543 2 588999998765321100 011222 11222334789999999875
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.2e-11 Score=104.97 Aligned_cols=136 Identities=13% Similarity=0.053 Sum_probs=87.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEE-EeCCCCcchh----hhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~-~~R~~~~~~~----l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
++++||+|+ |+||++++++|+++ |++|++ ..|+.++.++ +... .+..+.+|. + ...
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 999876 4676544322 2222 244455654 1 124
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+++...... +.. ....++ ..+.+.++||++||...+... .+
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~ 150 (250)
T PRK08063 82 RLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL-----------EN 150 (250)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------CC
Confidence 6899999998543211 111 011111 123456799999997543311 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|.+.|.+++.+ + +++++|+.+..+.
T Consensus 151 ~--~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 151 Y--TTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 2 57999999999887654 2 5889999997653
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.7e-11 Score=103.66 Aligned_cols=168 Identities=10% Similarity=-0.030 Sum_probs=103.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||+|+ |+||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ....+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367999997 99999999999999 9999999998765544322 1344455553 1 2357999
Q ss_pred EEEccCCCCCC--------ChHH-------HHHHHH---H---Hhc-CCCeEEEEccCe-eecCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL--------DYPG-------DVRLAA---L---SWN-GEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 146 Vi~~a~~~~~~--------~~~~-------~~~~~~---~---~~~-gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~~ 202 (268)
|||+++..... ++.+ ....++ . ... ...++|++||.. .++. .+.
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~~- 150 (257)
T PRK07067 84 LFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------------ALV- 150 (257)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------------CCC-
Confidence 99999853211 1111 111111 0 111 235899999954 3321 122
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHc------CC---ccCCCCcccCcccHhhHh
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQK------GT---VDSRPDHILNLIHYELPS 264 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~------g~---~~~~g~~~~~~Ihv~DlA 264 (268)
..|+.+|...|.+.+.. + .+++||+.++++........+.. ++ .+..+.....+++.+|+|
T Consensus 151 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 229 (257)
T PRK07067 151 -SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLT 229 (257)
T ss_pred -chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHH
Confidence 57999998887776543 2 68999999998742211110100 00 122334456789999999
Q ss_pred hcc
Q 024417 265 RLQ 267 (268)
Q Consensus 265 ~ai 267 (268)
+++
T Consensus 230 ~~~ 232 (257)
T PRK07067 230 GMA 232 (257)
T ss_pred HHH
Confidence 875
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.4e-11 Score=104.10 Aligned_cols=170 Identities=12% Similarity=0.010 Sum_probs=98.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chh----hhcC--CceeeccCc---c-----------ccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~----l~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
+++||+|+ |+||++++++|+++ |++|++++|+.+. .+. +... .+..+.+|. + ...+
T Consensus 7 k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 68999997 99999999999999 9999999997532 222 2211 244455553 1 1247
Q ss_pred CCEEEEccCCCCCC--C-------hHHHHHHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 143 FPYVIFCAPPSRSL--D-------YPGDVRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~--~-------~~~~~~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
+|+|||+|+..... + ...+..+++ .. .....++|++||...+.... .+.. |. ...|+.+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~~~---~~-~~~Y~~s 156 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VKTM---PE-YEPVARS 156 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----ccCC---cc-ccHHHHH
Confidence 99999999753211 0 112222222 11 12235899999954321110 1111 21 2689999
Q ss_pred HHHHHHHHHHcC---------ceEEEeCceecCCCcHHHHHHHcCCc--c-CCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEFG---------GCVLRLAGLYKADRGAHVYWLQKGTV--D-SRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~~---------~tIlRp~~vyG~~~~~~~~~l~~g~~--~-~~g~~~~~~Ihv~DlA~ai 267 (268)
|...|.+++.+. +++++|+.+-++-... ...+..+ . ........+++++|+|+++
T Consensus 157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 223 (248)
T PRK07806 157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT---LLNRLNPGAIEARREAAGKLYTVSEFAAEV 223 (248)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh---hhccCCHHHHHHHHhhhcccCCHHHHHHHH
Confidence 999999887652 4666777665442110 1111000 0 0000123689999999876
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-10 Score=108.34 Aligned_cols=145 Identities=17% Similarity=0.173 Sum_probs=93.7
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccC------c-----c-cc
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKW------T-----E-AT 140 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D------~-----~-~~ 140 (268)
+....+++|||+|+ |.+|+.+++.|+++ |+.|+++.|+.++...+.. .+...+..+ . + ..
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~ 151 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP 151 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc
Confidence 33445678999997 99999999999999 9999999998776655433 111111111 1 0 12
Q ss_pred CCCCEEEEccCCCCCC-----C---hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC-CCHHHHH
Q 024417 141 QKFPYVIFCAPPSRSL-----D---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG-RSPRTDV 209 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~-----~---~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~-~~~y~~s 209 (268)
....+++-|++..... . ..++..+++ ++..|++|+|++|+++.-..+. +++... ...+-.+
T Consensus 152 ~~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~--------~~~~~~~~~~~~~~ 223 (411)
T KOG1203|consen 152 KGVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ--------PPNILLLNGLVLKA 223 (411)
T ss_pred ccceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC--------CchhhhhhhhhhHH
Confidence 2344666666532221 1 245666666 3568999999998765422211 111110 1244578
Q ss_pred HHHHHHHHHHcC--ceEEEeCceecC
Q 024417 210 LLKAEKVILEFG--GCVLRLAGLYKA 233 (268)
Q Consensus 210 K~~aE~~l~~~~--~tIlRp~~vyG~ 233 (268)
|+.+|+++++.+ ++|+|++...-.
T Consensus 224 k~~~e~~~~~Sgl~ytiIR~g~~~~~ 249 (411)
T KOG1203|consen 224 KLKAEKFLQDSGLPYTIIRPGGLEQD 249 (411)
T ss_pred HHhHHHHHHhcCCCcEEEeccccccC
Confidence 999999999988 899999987643
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.5e-11 Score=104.90 Aligned_cols=173 Identities=14% Similarity=0.092 Sum_probs=112.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeC-CCCcchhhhcCCceeeccCcc---ccCCCCEEEEccCCCCC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTM-TADHHDELINMGITPSLKWTE---ATQKFPYVIFCAPPSRS- 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R-~~~~~~~l~~~~i~~~~~D~~---~~~~~D~Vi~~a~~~~~- 155 (268)
|+||||+|. |.+|+++.+.+.+. |. +=.++.- .+..+..+ .|.+ .-.++.+|||+|+....
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q--~~~~e~wvf~~skd~DLt~~---------a~t~~lF~~ekPthVIhlAAmVGGl 69 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQ--GFDDENWVFIGSKDADLTNL---------ADTRALFESEKPTHVIHLAAMVGGL 69 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhc--CCCCcceEEeccccccccch---------HHHHHHHhccCCceeeehHhhhcch
Confidence 579999986 99999999999988 54 2222222 11111111 1111 23577899999975432
Q ss_pred ----C---ChHHH-H---HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHH
Q 024417 156 ----L---DYPGD-V---RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP----VVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 156 ----~---~~~~~-~---~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~----~~p~~~~~y~~sK~~aE~~l~ 218 (268)
. ++... + .|++ +.+.|++++|++.|+.+|.+....||+|..- +.|.. ..|+.+|+.+.-.-+
T Consensus 70 f~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN-~gYsyAKr~idv~n~ 148 (315)
T KOG1431|consen 70 FHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSN-FGYSYAKRMIDVQNQ 148 (315)
T ss_pred hhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCc-hHHHHHHHHHHHHHH
Confidence 1 12111 1 1333 3567999999999999999877778998753 33431 367778865553333
Q ss_pred ----HcC--ceEEEeCceecCCCcH----------HHHHH----HcCC----ccCCCCcccCcccHhhHhhccC
Q 024417 219 ----EFG--GCVLRLAGLYKADRGA----------HVYWL----QKGT----VDSRPDHILNLIHYELPSRLQC 268 (268)
Q Consensus 219 ----~~~--~tIlRp~~vyG~~~~~----------~~~~l----~~g~----~~~~g~~~~~~Ihv~DlA~ai~ 268 (268)
+.+ ++-+-|.++|||.++. +..+. ..|. +++.|...+.|||.+|+|++++
T Consensus 149 aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i 222 (315)
T KOG1431|consen 149 AYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFI 222 (315)
T ss_pred HHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHH
Confidence 334 5888999999997652 12221 2343 2789999999999999999863
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=7.7e-11 Score=103.05 Aligned_cols=137 Identities=12% Similarity=0.030 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc------CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~------~~i~~~~~D~---~-----------~~~~ 142 (268)
.++|||+|+ |+||++++++|+++ |++|++++|+++..+.+.. ..+..+..|. + ....
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 9999999998755433321 1234455553 1 1357
Q ss_pred CCEEEEccCCCCC-----C-C---hHHHH-------HHHH---HH--hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS-----L-D---YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-----~-~---~~~~~-------~~~~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+|+.... + + +.+.+ ..++ .. ....+++|++||...+... .+.
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~~ 151 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ-----------PKY 151 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC-----------CCc
Confidence 8999999985321 1 1 11111 1111 11 1123689999997654321 122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
..|+.+|...|.+++.+ + .+++||+.++++..
T Consensus 152 --~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 192 (258)
T PRK07890 152 --GAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL 192 (258)
T ss_pred --chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence 57899999888777654 2 68999999999853
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=6.1e-11 Score=105.02 Aligned_cols=135 Identities=16% Similarity=0.104 Sum_probs=89.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc----CCceeeccCc---c----c-------c
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWT---E----A-------T 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~----~~i~~~~~D~---~----~-------~ 140 (268)
.+++||+|+ |+||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + . .
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999997 99999999999999 99999999986543322 11 1234444553 1 1 2
Q ss_pred CCCCEEEEccCCCCC------CC---hHHH-------HHHHH----H--HhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS------LD---YPGD-------VRLAA----L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~------~~---~~~~-------~~~~~----~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+++.... .+ +.+. ...++ . .+.+..++|++||...+...
T Consensus 85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~----------- 153 (276)
T PRK05875 85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH----------- 153 (276)
T ss_pred CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC-----------
Confidence 478999999984311 01 1111 11111 0 12345689999998765421
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
.+. +.|+.+|...|.+++.+. ++++||+.+.++
T Consensus 154 ~~~--~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~ 195 (276)
T PRK05875 154 RWF--GAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTD 195 (276)
T ss_pred CCC--cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCc
Confidence 122 679999999998887542 589999998765
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.4e-10 Score=103.36 Aligned_cols=123 Identities=12% Similarity=-0.025 Sum_probs=79.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c----c-------cC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~----~-------~~ 141 (268)
.++++||||+ |+||++++++|+++ |++|++++|+.+..+.. ...+ +..+.+|. + . ..
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3578999996 99999999999999 99999999976544332 2223 34455554 1 1 23
Q ss_pred CCCEEEEccCCCCCC-----C---hH-------HHHHH----HH--HHhcCC------CeEEEEccCeeecCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL-----D---YP-------GDVRL----AA--LSWNGE------GSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~---~~-------~~~~~----~~--~~~~gv------kr~V~~SS~~vYg~~~~~~~~E 194 (268)
.+|+|||+|+..... . +. .+..+ ++ ..+.+. .++|++||...|...
T Consensus 83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------- 155 (287)
T PRK06194 83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP------- 155 (287)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-------
Confidence 689999999864321 1 11 11111 11 122222 589999998766422
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
.+. ..|+.+|...|.+++.+
T Consensus 156 ----~~~--~~Y~~sK~a~~~~~~~l 175 (287)
T PRK06194 156 ----PAM--GIYNVSKHAVVSLTETL 175 (287)
T ss_pred ----CCC--cchHHHHHHHHHHHHHH
Confidence 112 57999999998887654
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-10 Score=104.53 Aligned_cols=148 Identities=12% Similarity=0.055 Sum_probs=93.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c-----------ccCCCCE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
..++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. .++..+.+|. + ...++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 3468999997 99999999999999 9999999998765443321 1355555664 1 1257999
Q ss_pred EEEccCCCCC------CChHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCC-CCCCCCCCCCCCCCCH
Q 024417 146 VIFCAPPSRS------LDYPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSP 205 (268)
Q Consensus 146 Vi~~a~~~~~------~~~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~-~~~~E~~~~~p~~~~~ 205 (268)
|||+|+.... +++... ++.++ .++.+..++|++||.+.+..... ...++..+..+. ..
T Consensus 103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~--~~ 180 (315)
T PRK06196 103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKW--LA 180 (315)
T ss_pred EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChH--HH
Confidence 9999985321 112111 11111 13345579999999754321110 001111222222 57
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
|+.+|...|.+.+.+ + ++++|||.++++-
T Consensus 181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 999999888765433 2 6899999998873
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=2.9e-10 Score=101.30 Aligned_cols=169 Identities=14% Similarity=0.026 Sum_probs=103.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~ 141 (268)
.++++||||+ |.||++++++|.++ |++|++.+|+.++.+.+ ...+ +..+.+|. + ...
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3567999997 99999999999999 99999999986554332 2223 33445553 1 234
Q ss_pred CCCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~-------~~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+|+..... + +.+ +..++. ..+.+ ..++|++||...|... .
T Consensus 83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----------~ 151 (275)
T PRK05876 83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----------A 151 (275)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----------C
Confidence 689999999853221 1 111 111111 11233 5789999998765421 1
Q ss_pred CCCCCHHHHHHHH----HHHHHHHc---C--ceEEEeCceecCCCcHHHHHHH-----c-CCc--cCCCCcccCcccHhh
Q 024417 200 PIGRSPRTDVLLK----AEKVILEF---G--GCVLRLAGLYKADRGAHVYWLQ-----K-GTV--DSRPDHILNLIHYEL 262 (268)
Q Consensus 200 p~~~~~y~~sK~~----aE~~l~~~---~--~tIlRp~~vyG~~~~~~~~~l~-----~-g~~--~~~g~~~~~~Ihv~D 262 (268)
+. ..|+.+|.. +|.+..++ + .++++|+.+.++...... .+. . ... .+......++++++|
T Consensus 152 ~~--~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (275)
T PRK05876 152 GL--GAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE-RIRGAACAQSSTTGSPGPLPLQDDNLGVDD 228 (275)
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh-hhcCccccccccccccccccccccCCCHHH
Confidence 22 579999986 55555444 2 689999999876321111 110 0 000 122234567899999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 229 va~~~ 233 (275)
T PRK05876 229 IAQLT 233 (275)
T ss_pred HHHHH
Confidence 99875
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.1e-10 Score=102.07 Aligned_cols=163 Identities=14% Similarity=0.045 Sum_probs=101.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~~ 142 (268)
.++|||+|+ |+||+.++++|+++ |++|++++|++++.+.+ ...+ +..+.+|. + ....
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 478999997 99999999999999 99999999986554332 2222 33444453 1 2356
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|+|||+++...... +.+ +..+++ ..+.+.+++|++||...+... ...
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~-----------~~~ 156 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR-----------PGI 156 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC-----------CCC
Confidence 899999998643211 111 111111 123467899999986543211 122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH------HHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~------~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
..|+.+|...|.+.+.+ + +.++||+.+.++..... ..++.+.. ....+.+.+|+|++
T Consensus 157 --~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~ 228 (255)
T PRK07523 157 --APYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRT------PAGRWGKVEELVGA 228 (255)
T ss_pred --ccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcC------CCCCCcCHHHHHHH
Confidence 57999999988876654 2 58899999998742211 11122111 12236678998876
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 229 ~ 229 (255)
T PRK07523 229 C 229 (255)
T ss_pred H
Confidence 4
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.9e-10 Score=99.96 Aligned_cols=135 Identities=11% Similarity=0.027 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~-----------~~~~ 142 (268)
++++||+|+ |+||++++++|+++ |++|++++|+.++...+. . ..+..+.+|. + ...+
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999997 99999999999999 999999999865543321 1 1344555553 1 1346
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++...... +.+ ...+++ .++.+.+++|++||...|.... ..
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~-----------~~ 149 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS-----------GE 149 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC-----------CC
Confidence 899999998532111 111 111111 1245678999999987765321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|.+.|.+.+.+ + ++++||+.++++
T Consensus 150 --~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~ 188 (250)
T TIGR03206 150 --AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTA 188 (250)
T ss_pred --chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccch
Confidence 47899998777666543 2 689999999877
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-10 Score=99.08 Aligned_cols=164 Identities=15% Similarity=0.012 Sum_probs=98.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELIN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~--~~i~~~~~D~---~-----------~~~ 141 (268)
++++||||+ |+||++++++|.++ |++|++++|+... .. .+.. ..+..+.+|. + ...
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 357999997 99999999999999 9999999986432 11 1111 1344555553 1 135
Q ss_pred CCCEEEEccCCCCC--C---C-----hHH-------HHHHHH-------HHhcC-----CCeEEEEccCeeecCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS--L---D-----YPG-------DVRLAA-------LSWNG-----EGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~--~---~-----~~~-------~~~~~~-------~~~~g-----vkr~V~~SS~~vYg~~~~~~~ 192 (268)
.+|+|||+++.... . + +.+ +..++. .+..+ ++++|++||...+....
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 155 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP---- 155 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence 79999999985321 0 0 111 111111 11111 56899999976543211
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH----HHHHcCCccCCCCcccCccc
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV----YWLQKGTVDSRPDHILNLIH 259 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~----~~l~~g~~~~~g~~~~~~Ih 259 (268)
+. +.|+.+|.+.|.+++.+ + .+++||+.++++...... ..+..+.. ....+.+
T Consensus 156 -------~~--~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 221 (256)
T PRK12745 156 -------NR--GEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLV-----PMPRWGE 221 (256)
T ss_pred -------CC--cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCC-----CcCCCcC
Confidence 12 57888999988776644 2 689999999987432211 11111111 1234668
Q ss_pred HhhHhhcc
Q 024417 260 YELPSRLQ 267 (268)
Q Consensus 260 v~DlA~ai 267 (268)
.+|+++++
T Consensus 222 ~~d~a~~i 229 (256)
T PRK12745 222 PEDVARAV 229 (256)
T ss_pred HHHHHHHH
Confidence 88888765
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.1e-10 Score=100.14 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=90.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
+++|+|||+ |+||++++++|+++ |++|++++|++++.... .+++.+.+|. + ....+|+|||
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 357999997 99999999999999 99999999986554322 3555666654 1 2346899999
Q ss_pred ccCCCCCC---C-----hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~---~-----~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+..... + +.+ +...++ .++.+.+++|++||...+... |. ...|+
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~-~~~Y~ 146 (270)
T PRK06179 80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA------------PY-MALYA 146 (270)
T ss_pred CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC------------CC-ccHHH
Confidence 99864321 1 111 111111 134678899999997654321 11 15799
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+|...|.+.+.. + ++++||+.+.++
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~ 181 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTN 181 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccc
Confidence 9999888776543 3 699999998776
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.5e-10 Score=99.35 Aligned_cols=169 Identities=9% Similarity=-0.015 Sum_probs=98.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccch----hhhcCC--ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHD----ELINMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~----~l~~~~--i~~~~~D~---~-----------~~~ 141 (268)
+++|||+|+ |+||++++++|+++ |++|+...|.. +... .+...+ +..+.+|. + ...
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 478999997 99999999999999 99998877643 2221 112122 22333443 1 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHHH----HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
.+|+|||+|+...... +.+.+ ..+. ......++||++||...|... .+.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~- 151 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA-----------YGL- 151 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC-----------CCc-
Confidence 7899999998532211 11110 0111 111223689999998776421 123
Q ss_pred CCHHHHHHHHHHHHHHHcC--------ceEEEeCceecCCCcHHHHHHH--cCCccCCCCcccCcccHhhHhhcc
Q 024417 203 RSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKADRGAHVYWLQ--KGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~~~~~~~~~l~--~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.|+.+|...|.+++.+. ..+++|+.+.++.......... .............+++++|+|+++
T Consensus 152 -~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 225 (252)
T PRK06077 152 -SIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFV 225 (252)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHH
Confidence 689999999988877542 5788999887663211110000 000000111233689999999875
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.9e-10 Score=100.47 Aligned_cols=133 Identities=17% Similarity=0.118 Sum_probs=86.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc------CCceeeccCc---c----cc-CCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E----AT-QKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~------~~i~~~~~D~---~----~~-~~~D~Vi~ 148 (268)
+++|||||+ |.||++++++|+++ |++|++++|++++...+.. .++..+.+|. + ++ .++|+|||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEE
Confidence 468999997 99999999999999 9999999997654433221 1344555554 1 23 38999999
Q ss_pred ccCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+...... +.. + .+.++ ..+.+.+++|++||...+... + .. ..|+
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------~--~~--~~Y~ 146 (257)
T PRK09291 80 NAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---------P--FT--GAYC 146 (257)
T ss_pred CCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---------C--Cc--chhH
Confidence 998643211 111 0 11111 134566899999986432211 0 11 5799
Q ss_pred HHHHHHHHHHHH-------cC--ceEEEeCcee
Q 024417 208 DVLLKAEKVILE-------FG--GCVLRLAGLY 231 (268)
Q Consensus 208 ~sK~~aE~~l~~-------~~--~tIlRp~~vy 231 (268)
.+|...|.+.+. .+ ++++||+.+.
T Consensus 147 ~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 147 ASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 999988876543 23 7999998864
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.3e-10 Score=98.17 Aligned_cols=137 Identities=12% Similarity=0.019 Sum_probs=88.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc----chhh----hc--CCceeeccCc---c-----------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDEL----IN--MGITPSLKWT---E----------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~----~~~l----~~--~~i~~~~~D~---~----------- 138 (268)
+|+++|+|+ |+||++++++|+++ |++|++++|...+ .+.+ .. ..+..+.+|. +
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 478999997 99999999999999 9999998764322 1111 11 1344555554 1
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H----HhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L----SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~---~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...++|+|||+++...... +.+ +...++ . ++.+.+++|++||...+...
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 154 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGN--------- 154 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCC---------
Confidence 1257999999998644211 111 111111 1 13466899999997665421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
.+. ..|+.+|...|.+++.+ + ++++||+.++++..
T Consensus 155 --~~~--~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 155 --RGQ--VNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred --CCC--chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 122 57889998877666543 2 69999999998753
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.7e-10 Score=100.74 Aligned_cols=167 Identities=10% Similarity=-0.031 Sum_probs=97.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchh----hhcC--CceeeccCc---c----cc--------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LINM--GITPSLKWT---E----AT-------- 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~----l~~~--~i~~~~~D~---~----~~-------- 140 (268)
.++++|+|+ |+||++++++|+++ |++|.++ .|+.++.+. +... .+..+.+|. + .+
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 368999997 99999999999999 9999875 565543322 2211 244455554 1 11
Q ss_pred -----CCCCEEEEccCCCCCCC--------hHHHH-------HHHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 141 -----QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 141 -----~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
.++|+|||+++...... +.+.+ .+++ . ......++|++||..+|...
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~--------- 154 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF--------- 154 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC---------
Confidence 36899999998643211 11111 1111 1 11233689999998776532
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH--HHHHcCCccCCCCcccCcccHhhHhh
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV--YWLQKGTVDSRPDHILNLIHYELPSR 265 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~--~~l~~g~~~~~g~~~~~~Ihv~DlA~ 265 (268)
.+. ..|+.+|.+.|.+.+.+ + +++++|+.++++-..... ..+. ...........+++++|+|+
T Consensus 155 --~~~--~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~ 228 (254)
T PRK12746 155 --TGS--IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIR--NFATNSSVFGRIGQVEDIAD 228 (254)
T ss_pred --CCC--cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHH--HHHHhcCCcCCCCCHHHHHH
Confidence 112 57999999888765433 2 588999999886321100 0000 00001112234678899988
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 229 ~~ 230 (254)
T PRK12746 229 AV 230 (254)
T ss_pred HH
Confidence 75
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.9e-10 Score=99.92 Aligned_cols=163 Identities=13% Similarity=-0.004 Sum_probs=102.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.++++|+|+ |.||++++++|.++ |++|++++|++++...+ +.. .++.+.+|. + ...+
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 99999999987654332 221 345555554 1 1257
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++...... +.+ +..++. ..+.+..++|++||...+.... ..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 153 (250)
T PRK12939 85 LDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------KL 153 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------Cc
Confidence 999999998643211 111 111111 1233456999999976543211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+++.+ + .+.++||.+..+.... ....... ......+++.+|+|+++
T Consensus 154 --~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 154 --GAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLK------GRALERLQVPDDVAGAV 225 (250)
T ss_pred --chHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHh------cCCCCCCCCHHHHHHHH
Confidence 46899999988877653 2 5788999887663211 1111111 22334578899999875
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.6e-10 Score=100.03 Aligned_cols=136 Identities=16% Similarity=0.106 Sum_probs=89.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc---hhhhcCC--ceeeccCc---c-----------ccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELINMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~---~~l~~~~--i~~~~~D~---~-----------~~~ 141 (268)
+.++++||||+ |+||++++++|+++ |++|++++|++... +.+...+ +..+.+|. + ...
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG 83 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 34578999997 99999999999999 99999999974321 1122222 33344443 1 235
Q ss_pred CCCEEEEccCCCC--C--CC-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSR--S--LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~--~--~~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+|+... . .+ +.+.+ +.++ ..+.+..++|++||...|+.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------- 150 (260)
T PRK12823 84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI------------- 150 (260)
T ss_pred CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-------------
Confidence 7999999997421 1 01 11111 1111 13455679999999876542
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+. .+|+.+|...|.+.+.+ + .++++|+.++++.
T Consensus 151 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 151 NR--VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred CC--CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 11 46899999888877653 2 5899999999873
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.6e-10 Score=100.27 Aligned_cols=135 Identities=13% Similarity=0.019 Sum_probs=90.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
+++|||+|+ |+||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ....+|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467999997 99999999999999 9999999998765544322 1233444443 1 2357899
Q ss_pred EEEccCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+...... +.+ . ++.++ .++.+.+++|++||...+.... .. .
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~--~ 147 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------MS--G 147 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------Cc--c
Confidence 999998643211 111 1 11111 1345678999999977654321 11 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+.+.. + ++++||+.+..+
T Consensus 148 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~ 185 (275)
T PRK08263 148 IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTD 185 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCC
Confidence 7999999887666432 3 689999988754
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.20 E-value=2.9e-10 Score=100.09 Aligned_cols=180 Identities=18% Similarity=0.113 Sum_probs=119.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc--h--hhhcC------CceeeccCc-c--------ccCCC
Q 024417 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHH--D--ELINM------GITPSLKWT-E--------ATQKF 143 (268)
Q Consensus 84 m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~--~--~l~~~------~i~~~~~D~-~--------~~~~~ 143 (268)
+++-|||| +|+-|+.|++.|+++ |++|+++.|..... . +|... .+..+.+|+ + ..-.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 56789999 599999999999999 99999999863221 1 22221 244555665 2 23589
Q ss_pred CEEEEccCCCCCCC------h---HH--HHHHHHH--HhcC--CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 144 PYVIFCAPPSRSLD------Y---PG--DVRLAAL--SWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 144 D~Vi~~a~~~~~~~------~---~~--~~~~~~~--~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
|-|+|+|+...... + .. ++.+++. +..+ .-||.+.||+..||.-...+.+|.+|..|. +||+.
T Consensus 80 dEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr--SPYAv 157 (345)
T COG1089 80 DEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPYAV 157 (345)
T ss_pred hhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC--CHHHH
Confidence 99999998765321 1 11 2223331 2223 358999999999998777799999999997 99999
Q ss_pred HHHHHHHHHHHcC---ceEEEeCcee---cCCCc--HH-------HHHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEFG---GCVLRLAGLY---KADRG--AH-------VYWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~~---~tIlRp~~vy---G~~~~--~~-------~~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|+.+-=...++. ....--|.+| +|.++ +. ..+|+.|.. .++-+..++|=|..|-++++
T Consensus 158 AKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~m 235 (345)
T COG1089 158 AKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAM 235 (345)
T ss_pred HHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHH
Confidence 9987653333321 1222234444 33222 11 123555653 57889999999999999876
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.19 E-value=5.4e-10 Score=97.33 Aligned_cols=166 Identities=9% Similarity=-0.030 Sum_probs=101.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
.+++||+|+ |+||+.++++|+++ |++|++++|+.. .. ....+..+.+|. + ....+|+|||
T Consensus 8 ~k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~~--~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 8 GKTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAFL--TQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecchh--hh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999997 99999999999999 999999999761 11 112344455553 1 1346899999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+++...... +.+.+ ..++ .++.+..++|++||...... ..+. ..|+
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~--~~Y~ 149 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----------RIGM--AAYG 149 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----------CCCC--chhH
Confidence 998643211 11111 1111 12345578999999654321 1122 5799
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH------HHHHcC--CccCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV------YWLQKG--TVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~------~~l~~g--~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...|.+++.+ + .++++|+.++++...... .....+ ...........+++++|+|+++
T Consensus 150 ~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 226 (252)
T PRK08220 150 ASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAV 226 (252)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHH
Confidence 9999888777543 2 688999999987432110 000000 0001112234588999999875
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.7e-10 Score=98.26 Aligned_cols=133 Identities=13% Similarity=0.116 Sum_probs=89.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |+||++++++|+++ |++|++++|+++..+.+. .. .+..+..|. + ....
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 999999999865433321 11 233445554 1 1347
Q ss_pred CCEEEEccCCCCC-------C-C---hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS-------L-D---YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-------~-~---~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
+|+|||+++.... + + +.+. ..+++ ....+.+++|++||...|..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------ 151 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY------------ 151 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC------------
Confidence 8999999985321 0 1 1111 11111 12334679999999887642
Q ss_pred CCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecCC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKAD 234 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~~ 234 (268)
. +.|+.+|...|.+++.+. .++++||.+..+.
T Consensus 152 --~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 192 (250)
T PRK07774 152 --S--NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEA 192 (250)
T ss_pred --c--cccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcc
Confidence 2 579999999988776542 5899999887664
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=5.3e-10 Score=96.80 Aligned_cols=160 Identities=16% Similarity=0.063 Sum_probs=98.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.++++|+|+ |.||++++++|+++ |++|++++|++++.+++ ... .+..+.+|. + ....
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 367999997 99999999999999 99999999986543322 212 344455553 1 1347
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++...... +.+.+ .++. ..+.+.+++|++||...+... .+.
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~ 153 (239)
T PRK07666 85 IDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA-----------AVT 153 (239)
T ss_pred ccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-----------CCC
Confidence 999999998643211 11111 1111 124567899999997654321 112
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...+.+++.+ + ++++||+.+..+.... . +..... ...++..+|+|+++
T Consensus 154 --~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~----~--~~~~~~---~~~~~~~~~~a~~~ 217 (239)
T PRK07666 154 --SAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVD----L--GLTDGN---PDKVMQPEDLAEFI 217 (239)
T ss_pred --cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhh----c--cccccC---CCCCCCHHHHHHHH
Confidence 46888888777665432 3 6899999998763211 0 011111 12357788888765
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.18 E-value=6e-10 Score=96.30 Aligned_cols=134 Identities=15% Similarity=0.143 Sum_probs=90.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeeccCc---c-------ccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWT---E-------ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-------~~~~~D~Vi~~a~ 151 (268)
.++|+|+|+ |+||++++++|+++ |+ +|++++|+.++.+. ...++..+.+|. + ....+|+|||+++
T Consensus 6 ~~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 6 GKVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 358999996 99999999999999 99 99999998765443 223455555554 1 2346899999998
Q ss_pred C-CCCC-----C---hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 152 P-SRSL-----D---YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 152 ~-~~~~-----~---~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
. .... . +.+.+ ..+. .+..+.+++|++||...|... .+. ..|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~-----------~~~--~~y~~s 149 (238)
T PRK08264 83 IFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNF-----------PNL--GTYSAS 149 (238)
T ss_pred cCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCC-----------CCc--hHhHHH
Confidence 7 2211 0 11111 1111 123467889999997765421 122 579999
Q ss_pred HHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 210 LLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 210 K~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|...|.+.+.+ + ++++||+.+.++
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 99998776543 2 688999999765
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=7.9e-10 Score=96.88 Aligned_cols=167 Identities=12% Similarity=0.103 Sum_probs=101.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c----CCceeeccCc---c-----------ccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~----~~i~~~~~D~---~-----------~~~ 141 (268)
++|||+|+ |+||++++++|.++ |++|++++|+.++.+.+. . ..+..+.+|. + ...
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57999997 99999999999999 999999999865443321 1 1244555554 1 135
Q ss_pred CCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEccCe-eecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSA-IYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~-vYg~~~~~~~~E~~~~ 198 (268)
..|+|||+|+..... + +.+.+ +.++ +...+ ..++|++||.. .|+..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------- 149 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------- 149 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------
Confidence 789999999854321 1 11111 1111 12334 35899999854 33311
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-HHHHH--HcCC----c---cCCCCcccCccc
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWL--QKGT----V---DSRPDHILNLIH 259 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-~~~~l--~~g~----~---~~~g~~~~~~Ih 259 (268)
.. ..|+.+|.+.|.+++.+ + ..++|||.++++.... ..... ..+. . ...+.....+++
T Consensus 150 -~~--~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T PRK12384 150 -HN--SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCD 226 (259)
T ss_pred -CC--chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCC
Confidence 11 57999999877665543 2 6899999988764321 11111 1110 0 122334556889
Q ss_pred HhhHhhcc
Q 024417 260 YELPSRLQ 267 (268)
Q Consensus 260 v~DlA~ai 267 (268)
.+|+++++
T Consensus 227 ~~dv~~~~ 234 (259)
T PRK12384 227 YQDVLNML 234 (259)
T ss_pred HHHHHHHH
Confidence 99998875
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=6.4e-10 Score=98.53 Aligned_cols=135 Identities=13% Similarity=0.068 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
||++||||+ |+||++++++|+++ |++|++++|+.++.+.+...+++.+.+|. + ...++|+|||
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 678999997 99999999999999 99999999987666555545565555554 1 1257999999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH----H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 149 CAPPSRSLD--------YPGDV-------RLAA----L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~~~----~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
+|+...... +.+.+ ..+. . ...+..++|++||...+... + .. ..|+.
T Consensus 79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~~--~~Y~~ 145 (274)
T PRK05693 79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT---------P--FA--GAYCA 145 (274)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC---------C--Cc--cHHHH
Confidence 998543211 11111 1111 0 12345689999986533211 0 12 57999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+|...|.+.+.+ + .++++||.+..+
T Consensus 146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 998877765432 3 689999999754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=101.37 Aligned_cols=135 Identities=14% Similarity=0.018 Sum_probs=87.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~~ 143 (268)
|+|+|||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ....+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999997 99999999999999 99999999986654332 222 233445553 1 12479
Q ss_pred CEEEEccCCCCCCC----hHHHH---------------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD----YPGDV---------------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~----~~~~~---------------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|+|||+++...... ..+.. +.++ +.+.+..++|++||...+... ...
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~- 146 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG-----------PAM- 146 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCC-----------CCc-
Confidence 99999998643211 11111 1111 134567899999997654321 112
Q ss_pred CCHHHHHHHHHHHHHH----Hc---C--ceEEEeCceecCC
Q 024417 203 RSPRTDVLLKAEKVIL----EF---G--GCVLRLAGLYKAD 234 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~----~~---~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...+.+.+ +. + +++++|+.+..+.
T Consensus 147 -~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 147 -SSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 579999987554433 32 2 6899999998663
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.17 E-value=5.8e-10 Score=101.37 Aligned_cols=146 Identities=12% Similarity=0.049 Sum_probs=88.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c----c-------cCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E----A-------TQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~----~-------~~~ 142 (268)
+++++|||+ |+||.+++++|+++ |++|++++|+.++.+.+. . ..+..+.+|. + . ...
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 568999997 99999999999999 999999999866543321 1 1344555554 1 1 135
Q ss_pred CCEEEEccCCCCC-----C----ChHHH-------H----HHHH--HHhcC--CCeEEEEccCeeecCCCC----C--CC
Q 024417 143 FPYVIFCAPPSRS-----L----DYPGD-------V----RLAA--LSWNG--EGSFLFTSSSAIYDCSDN----G--AC 192 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-----~----~~~~~-------~----~~~~--~~~~g--vkr~V~~SS~~vYg~~~~----~--~~ 192 (268)
+|+|||+|+.... . ++... . +.++ .++.+ ..|+|++||...|..... . ..
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 9999999985321 1 11111 0 1111 12222 369999999875431100 0 00
Q ss_pred C------------------CCCCCCCCCCCHHHHHHHHHHHHH----HHc----C--ceEEEeCceecC
Q 024417 193 D------------------EDSPVVPIGRSPRTDVLLKAEKVI----LEF----G--GCVLRLAGLYKA 233 (268)
Q Consensus 193 ~------------------E~~~~~p~~~~~y~~sK~~aE~~l----~~~----~--~tIlRp~~vyG~ 233 (268)
+ +..+..|. ..|+.+|+..+.+. +++ + .+.+|||.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPG--KAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred chhhhhcchhcccccccccCccCCCcc--chhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 0 11223343 68999998775443 333 2 588999999864
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=6e-10 Score=96.61 Aligned_cols=135 Identities=14% Similarity=0.059 Sum_probs=91.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc------CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~------~~i~~~~~D~---~-----------~~~~ 142 (268)
|+++||+|+ |.||+.++++|+++ |++|++++|++++.+.+.. ..+.++.+|. + ....
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKA--GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 678999996 99999999999999 9999999998765433321 2344555664 1 1346
Q ss_pred CCEEEEccCCCCCC-----C---hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL-----D---YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++..... + +.+ . ++.++ ..+.+.+++|++||...|+... ..
T Consensus 84 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~~ 152 (241)
T PRK07454 84 PDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP-----------QW 152 (241)
T ss_pred CCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC-----------Cc
Confidence 99999999864321 0 110 0 11111 1334568999999988765321 12
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + ++++||+.+-.+
T Consensus 153 --~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~ 191 (241)
T PRK07454 153 --GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTP 191 (241)
T ss_pred --cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCC
Confidence 57999999888766542 3 689999998665
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=7.9e-10 Score=97.81 Aligned_cols=134 Identities=12% Similarity=-0.055 Sum_probs=87.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-C-CceeeccCc---c-----------ccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-GITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~-~i~~~~~D~---~-----------~~~~~D~V 146 (268)
++++||||+ |.||+.++++|+++ |++|++.+|++++.+.+.. . .+..+.+|. + ...++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999997 99999999999999 9999999998766544321 1 245555553 1 23578999
Q ss_pred EEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+...... +.+.+ +.++ ..+.+..++|++||...+... ... ..
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~ 149 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV-----------PGM--AT 149 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC-----------CCC--cc
Confidence 99998643211 11110 1111 134567899999997654321 112 57
Q ss_pred HHHHHHHHHHHHHH-------cC--ceEEEeCceec
Q 024417 206 RTDVLLKAEKVILE-------FG--GCVLRLAGLYK 232 (268)
Q Consensus 206 y~~sK~~aE~~l~~-------~~--~tIlRp~~vyG 232 (268)
|+.+|...+.+.+. .+ +++++|+.+-.
T Consensus 150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcc
Confidence 88889766644322 23 68999998754
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.2e-09 Score=94.32 Aligned_cols=134 Identities=12% Similarity=0.045 Sum_probs=85.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+++||+|+ |+||++++++|+++ |++|+++.|+.+. .. .+... .+..+.+|. + ...
T Consensus 5 ~~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 5 GKVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 9999888886543 11 12212 234444454 1 124
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~ 199 (268)
++|+|||+++...... +.+ ...++. ..+.+.+++|++||.. +|+..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~------------ 150 (248)
T PRK05557 83 GVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNP------------ 150 (248)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCC------------
Confidence 7899999998643211 111 111111 1234567899999863 34421
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+++.+ + .+++||+.+..+
T Consensus 151 ~~--~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~ 191 (248)
T PRK05557 151 GQ--ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETD 191 (248)
T ss_pred CC--chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCc
Confidence 11 56888998888666543 2 688999988654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.6e-10 Score=111.11 Aligned_cols=170 Identities=11% Similarity=0.007 Sum_probs=107.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-----CceeeccCc---c-----------ccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-----~i~~~~~D~---~-----------~~~~ 142 (268)
..++|||+|+ |+||++++++|+++ |++|++++|+.++.+.+... .+..+.+|. + ...+
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG 498 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3478999996 99999999999999 99999999987654433221 444555553 1 1347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHH----H--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPG-------DVRLA----A--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~~----~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+...... +.. +...+ . .+..+. .+||++||...+.... .
T Consensus 499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~-----------~ 567 (681)
T PRK08324 499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGP-----------N 567 (681)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCC-----------C
Confidence 999999998543211 111 11111 1 123343 7899999976543210 1
Q ss_pred CCCCHHHHHHHHHHHHHHHcC---------ceEEEeCcee-cCCCc---HHHHHH-HcCC-------ccCCCCcccCccc
Q 024417 201 IGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLY-KADRG---AHVYWL-QKGT-------VDSRPDHILNLIH 259 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vy-G~~~~---~~~~~l-~~g~-------~~~~g~~~~~~Ih 259 (268)
. ..|+.+|...|.+++.+. +.+++|+.+| +.+.. +...+. ..+. ....+.....+++
T Consensus 568 ~--~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~ 645 (681)
T PRK08324 568 F--GAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT 645 (681)
T ss_pred c--HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccC
Confidence 2 579999999998876542 5889999998 55321 111111 1111 1223445667899
Q ss_pred HhhHhhcc
Q 024417 260 YELPSRLQ 267 (268)
Q Consensus 260 v~DlA~ai 267 (268)
.+|+|+++
T Consensus 646 ~~DvA~a~ 653 (681)
T PRK08324 646 PEDVAEAV 653 (681)
T ss_pred HHHHHHHH
Confidence 99999875
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.9e-10 Score=96.21 Aligned_cols=135 Identities=10% Similarity=0.033 Sum_probs=90.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
|+|+|+|+ |+||.+++++|.++ |++|++++|++++.+.+.. ..+..+.+|. + ...++|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 47999997 99999999999999 9999999998766554422 2344555554 1 13479999
Q ss_pred EEccCCCCC-----C-C---hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 147 IFCAPPSRS-----L-D---YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 147 i~~a~~~~~-----~-~---~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
||+++.... + . +.+. ++.++ ..+.+.+++|++||...+. +..+. +
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~-----------~~~~~--~ 145 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW-----------PYAGG--N 145 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC-----------CCCCC--c
Confidence 999985321 0 1 1111 11111 1345678999999975432 11122 5
Q ss_pred HHHHHHHHHHHHHHHcC---------ceEEEeCceecCC
Q 024417 205 PRTDVLLKAEKVILEFG---------GCVLRLAGLYKAD 234 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~~ 234 (268)
.|+.+|...|.+.+... ..+++||.+.|+.
T Consensus 146 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 79999998887765541 5889999998664
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1e-09 Score=94.48 Aligned_cols=130 Identities=10% Similarity=0.017 Sum_probs=87.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----cc------CCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----AT------QKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~------~~~D~Vi~~ 149 (268)
.+++||+|+ |.||++++++|.++ |++|++++|+.++. . ..+.+..|. + .+ .++|+|||+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~--~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD--F---PGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc--c---CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 368999997 99999999999999 99999999976541 1 112333442 1 11 268999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 150 APPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
++...... +.+.+ +.++ .++.+.+++|++||..+|+.. .. ..|+.
T Consensus 76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~--~~Y~~ 141 (234)
T PRK07577 76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL------------DR--TSYSA 141 (234)
T ss_pred CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC------------Cc--hHHHH
Confidence 98643211 11111 1111 134567899999998876531 11 57999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+|...|.+.+.+ + ++++||+.+..+.
T Consensus 142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 999888776543 3 6899999988653
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.14 E-value=5.5e-10 Score=97.17 Aligned_cols=169 Identities=12% Similarity=0.008 Sum_probs=100.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcC--CceeeccCc---c-----------ccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINM--GITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~--~i~~~~~D~---~-----------~~~~~ 143 (268)
..+++||||+ |.||++++++|+++ |++|++++|+... .+.+... .+..+.+|. + ....+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999997 99999999999999 9999999986521 1122222 244555553 1 13579
Q ss_pred CEEEEccCCCCCC--------ChHHHHH-----------HHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL--------DYPGDVR-----------LAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~--------~~~~~~~-----------~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+++..... ++.+.+. .++ ....+ ..++|++||...|.... ..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~~ 150 (248)
T TIGR01832 82 DILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI-----------RV 150 (248)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC-----------CC
Confidence 9999999864321 1111111 111 11233 46899999987765321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + .++++||.+..+...... .......... ......++..+|+|+++
T Consensus 151 --~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~ 223 (248)
T TIGR01832 151 --PSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILE-RIPAGRWGTPDDIGGPA 223 (248)
T ss_pred --chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHh-cCCCCCCcCHHHHHHHH
Confidence 46888999888776544 2 589999999866321100 0000000000 01123578889998764
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-09 Score=99.02 Aligned_cols=147 Identities=12% Similarity=-0.013 Sum_probs=89.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc----CCceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MGITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~----~~i~~~~~D~---~-----------~ 139 (268)
..++|||||+ |+||++++++|+++ |++|+++.|+.++... +.. ..+..+.+|. + .
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 3578999997 99999999999999 9999999998654322 221 1344555554 1 1
Q ss_pred cCCCCEEEEccCCCCC------CChH-------HH----HHHHH--HHhcCCCeEEEEccCeee--cCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS------LDYP-------GD----VRLAA--LSWNGEGSFLFTSSSAIY--DCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~------~~~~-------~~----~~~~~--~~~~gvkr~V~~SS~~vY--g~~~~~~~~E~~~~ 198 (268)
..++|+|||+|+.... +++. .+ ++.++ .++.+.+++|++||.+.+ +........++.+.
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~ 172 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRY 172 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence 3479999999985321 1111 11 12222 133456799999998643 32111112222222
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C----ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G----GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~----~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|++.|.+.+.+ + .+.+.||.+..+
T Consensus 173 ~~~--~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 173 NRV--AAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred CcH--HHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 233 68999999888776543 1 133479888654
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.1e-10 Score=95.27 Aligned_cols=137 Identities=15% Similarity=0.049 Sum_probs=87.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhh----c--CCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----N--MGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~----~--~~i~~~~~D~---~-----------~ 139 (268)
++|+++||+|+ |+||.+++++|+++ |++|+.+ +|++++.+.+. . ..+..+.+|. + .
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 45678999997 99999999999999 9999998 88765543321 1 1244455554 1 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..++|+|||+++...... +.+ +..+++ ..+.+.+++|++||...+....
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------- 150 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------- 150 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC----------
Confidence 237999999998653211 111 111111 1234567899999975543211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...+.+++.. + ++++||+.+..+
T Consensus 151 -~~--~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~ 191 (247)
T PRK05565 151 -CE--VLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTE 191 (247)
T ss_pred -Cc--cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCc
Confidence 11 46888887766655443 2 689999998654
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-09 Score=96.30 Aligned_cols=134 Identities=14% Similarity=0.047 Sum_probs=88.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----CCceeeccCc---c--------c----cCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT---E--------A----TQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~~i~~~~~D~---~--------~----~~~~ 143 (268)
|+++||+|+ |+||+.++++|+++ |++|++++|+.++.+++.. ..+..+.+|. + . ...+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 678999997 99999999999999 9999999998776554432 2345555553 1 1 3467
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHH----H--HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPG-------DVRLA----A--LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~~----~--~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+|+...... +.+ ....+ . .+..+..++|++||.. +|+.. ..
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~------------~~ 146 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQP------------GL 146 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCC------------Cc
Confidence 99999998643211 111 11111 1 1234567899999864 44421 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.. + +++++|+.+-.+
T Consensus 147 --~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 147 --AVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred --hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 57889998887766543 2 578899988643
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=95.87 Aligned_cols=135 Identities=14% Similarity=0.078 Sum_probs=89.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----C-CceeeccCc---c-----------ccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-GITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~-~i~~~~~D~---~-----------~~~~~ 143 (268)
+++|||||+ |.||+.++++|+++ |++|++++|+.++.+.+.. . .+..+.+|. + ....+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999996 99999999999999 9999999998665443321 1 344555554 1 12358
Q ss_pred CEEEEccCCCCC----C--C---hHH-------HHHH----HH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRS----L--D---YPG-------DVRL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~----~--~---~~~-------~~~~----~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+++.... . + +.+ +... ++ ..+.+..++|++||...+... + ..
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------~--~~ 148 (257)
T PRK07024 80 DVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------P--GA 148 (257)
T ss_pred CEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------C--CC
Confidence 999999985321 1 1 111 1111 11 134556899999986543211 0 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + ++++||+.+.++
T Consensus 149 --~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 149 --GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred --cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCc
Confidence 46999999988776543 2 689999999876
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-09 Score=94.79 Aligned_cols=134 Identities=13% Similarity=0.048 Sum_probs=86.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-C--CceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--GITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~--~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.++++|+|+ |+||++++++|+++ |++|++++|+.+....+.. . .+..+.+|. + ....+|+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 9999999998654433321 1 233444443 1 2357899
Q ss_pred EEEccCCCCCCC--------hHHH-------HHHHH---HH-hcCCCeEEEEcc-CeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 146 VIFCAPPSRSLD--------YPGD-------VRLAA---LS-WNGEGSFLFTSS-SAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~-------~~~~~---~~-~~gvkr~V~~SS-~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
|||+++...... +.+. ...+. .. .....++|++|| .+.|+.. .. ..
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~~--~~ 149 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------NS--SV 149 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------Cc--cH
Confidence 999998643211 1111 11111 11 122356777776 4455421 12 58
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|+.+|...|.+++.+ + .+++||+.++++
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~ 186 (249)
T PRK06500 150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTP 186 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCH
Confidence 999999999887433 2 688999999987
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.6e-09 Score=94.09 Aligned_cols=167 Identities=9% Similarity=-0.040 Sum_probs=97.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchh----hhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~----l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.++++|+|+ |+||++++++|+++ |++|+++.+. ++..++ +... .+..+.+|. + ...
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 9999876553 333222 2222 244455554 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+...... +.+ +...++ ..+.+..++|++||...+... .+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 152 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FG 152 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CC
Confidence 6899999998643211 111 111111 112345799999996433211 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + .++++|+.+.++........... .. ........+.|++|+++++
T Consensus 153 ~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~edva~~~ 224 (247)
T PRK12935 153 Q--TNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQ-KI-VAKIPKKRFGQADEIAKGV 224 (247)
T ss_pred C--cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHH-HH-HHhCCCCCCcCHHHHHHHH
Confidence 2 57899998877665433 2 68899999986532111000000 00 0112234589999999876
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.8e-09 Score=93.09 Aligned_cols=136 Identities=12% Similarity=-0.003 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc------CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~------~~i~~~~~D~---~-----------~~~~ 142 (268)
.++|+|+|+ |+||++++++|.++ |++|++++|++++.+.+.. ..+..+.+|. + ....
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 478999997 99999999999999 9999999998766543321 1344455553 1 1346
Q ss_pred CCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcC--------CCeEEEEccCeeecCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNG--------EGSFLFTSSSAIYDCSDNGACD 193 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~g--------vkr~V~~SS~~vYg~~~~~~~~ 193 (268)
+|+|||+++...... +... ...+. ..... ..++|++||...+...
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------ 160 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL------ 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC------
Confidence 899999998532210 1110 01111 01111 3589999998765321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + ++++|||.++++.
T Consensus 161 -----~~~--~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 161 -----PQI--GLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred -----CCc--cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 112 57999998888776653 2 6889999999874
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.9e-09 Score=93.70 Aligned_cols=135 Identities=15% Similarity=0.145 Sum_probs=86.6
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchhhh----cC-C---ceeeccCc---c-----------ccC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI----NM-G---ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~l~----~~-~---i~~~~~D~---~-----------~~~ 141 (268)
+++|+|+ |+||+++++.|.++ |++|++++|+ .++.+.+. .. + +..+.+|. + ...
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4899996 99999999999999 9999999997 44433322 11 1 11233342 1 245
Q ss_pred CCCEEEEccCCCCCCC--------hHH-----------HHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-----------DVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-----------~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+++...... +.+ .++.++ .++.+.+++|++||...|.... .
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~-----------~ 147 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP-----------D 147 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC-----------C
Confidence 7899999998643211 111 111221 1344578999999987665321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C----ceEEEeCceecCCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G----GCVLRLAGLYKADR 235 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~----~tIlRp~~vyG~~~ 235 (268)
. ..|+.+|...|.+.+.+ + .+.++|+.+.++..
T Consensus 148 ~--~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~ 191 (251)
T PRK07069 148 Y--TAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIV 191 (251)
T ss_pred C--chhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcch
Confidence 1 46889998888766532 1 47889999887743
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-09 Score=92.51 Aligned_cols=136 Identities=13% Similarity=0.082 Sum_probs=88.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--------CCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--------~~i~~~~~D~---~-----------~~ 140 (268)
+++++|||+ |.||++++++|.++ |++|++++|++++.+.+.. ..+..+.+|. + ..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 468999997 99999999999999 9999999998765443321 1244445553 1 23
Q ss_pred CCCCEEEEccCCCCCC-----C---hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL-----D---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~-----~---~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+..... + +.+.+ +.++ .++.+.+++|++||...+... +.
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~~ 149 (248)
T PRK08251 80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL----------PG 149 (248)
T ss_pred CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC----------CC
Confidence 5799999999853321 1 11100 1111 124567899999996543211 01
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. ..|+.+|...|.+.+.+ + .++++|+.+.++
T Consensus 150 ~~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 150 VK--AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred Cc--ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence 22 57999998887666432 1 578899998765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=1.7e-09 Score=93.99 Aligned_cols=135 Identities=12% Similarity=0.091 Sum_probs=87.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceeeccCc---c--------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E--------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~---~--------~~~~~D 144 (268)
|++++|+|+ |+||.+++++|+++ |++|++++|++++.+.+.. ..++.+.+|. + ....+|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 678999997 99999999999999 9999999998765433211 1345555554 1 123579
Q ss_pred EEEEccCCCCCC-----C---hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL-----D---YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~-----~---~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+++..... + +.+.+ ..+. ..+.+.+++|++||..-.... + ..
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~--~~-- 145 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR---------A--SN-- 145 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC---------C--CC--
Confidence 999999753211 1 11111 1111 123467899999986421110 0 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...+.+.+.. + ++.++|+.++++
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 146 YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 46889998877766543 2 688899999876
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-09 Score=97.61 Aligned_cols=165 Identities=12% Similarity=0.056 Sum_probs=100.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~ 141 (268)
.+++|+|||+ |.||+.++++|.++ |++|++++|++++.+.+ ...+ +..+.+|. + ...
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence 3568999997 99999999999999 99999999987654432 2222 33444553 1 135
Q ss_pred CCCEEEEccCCCCCCC--------hHH-----------HHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-----------DVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-----------~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|++||+++...... +.+ .++.++ ..+.+..+||++||...|.... .
T Consensus 85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~-----------~ 153 (334)
T PRK07109 85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIP-----------L 153 (334)
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCC-----------c
Confidence 7999999998542211 111 111111 1334567999999988765321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc---------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...+.+.+.. + +++++|+.+..+...+....+ +. .......++..+|+|+++
T Consensus 154 ~--~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~~~--~~---~~~~~~~~~~pe~vA~~i 224 (334)
T PRK07109 154 Q--SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARSRL--PV---EPQPVPPIYQPEVVADAI 224 (334)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhhhc--cc---cccCCCCCCCHHHHHHHH
Confidence 1 57999998766544321 2 688999998765321111011 00 011122356788888875
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2e-09 Score=94.10 Aligned_cols=138 Identities=10% Similarity=0.017 Sum_probs=90.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~ 140 (268)
+.+++++|+|+ |.||+.++++|.++ |++|++++|+++..+.+ ... .+..+.+|. + ..
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 34678999997 99999999999999 99999999986554332 222 244555553 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|+|||+++...... +.+.+ ..+. ....+.+++|++||...+....
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~----------- 155 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA----------- 155 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC-----------
Confidence 46899999998643211 11111 1111 1234678999999875432110
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|.+.+.+.+.. + ...++|+.+.++.
T Consensus 156 ~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 156 GD--AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred Cc--cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 11 57888888877766543 2 5888999998874
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.5e-09 Score=91.34 Aligned_cols=134 Identities=14% Similarity=-0.011 Sum_probs=87.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~~~D 144 (268)
++|+|+|+ |.||++++++|+++ |++|++++|++++...+.. .+++.+.+|. + ....+|
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 67999997 99999999999999 9999999998765433321 2355555554 1 124799
Q ss_pred EEEEccCCCCCCC--------hHHHH-----------HHHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-----------RLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
+|||+++...... +.+.+ +.++. ...+.+++|++||...+... ... .
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~--~ 151 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF-----------AGG--A 151 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC-----------CCC--c
Confidence 9999998643211 11111 11111 12355789999987543311 122 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|+..+.+.+.+ + ++++||+.+..+
T Consensus 152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~ 189 (237)
T PRK07326 152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATH 189 (237)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCc
Confidence 6888888776655542 3 789999998765
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.8e-09 Score=91.43 Aligned_cols=136 Identities=8% Similarity=0.042 Sum_probs=89.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
+..++|||+|+ |.||++++++|.++ |++|++++|+.+.. ....+..+.+|. + ....+|+|
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34578999997 99999999999999 99999999975432 122344555553 1 23578999
Q ss_pred EEccCCCCC-----C-----ChHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 147 IFCAPPSRS-----L-----DYPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 147 i~~a~~~~~-----~-----~~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
||+|+.... . ++.+.+ ..+ + .++.+..++|++||...+... ..+.
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~~~~-- 149 (260)
T PRK06523 82 VHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL----------PEST-- 149 (260)
T ss_pred EECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC----------CCCc--
Confidence 999984210 0 111111 111 1 123456789999997654321 0112
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.+ + ..+++||.+..+.
T Consensus 150 ~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 150 TAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 57999999888776654 2 5889999998874
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.06 E-value=4e-09 Score=92.27 Aligned_cols=135 Identities=9% Similarity=0.011 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~~~ 142 (268)
++++||+|+ |+||++++++|.++ |++|++++|+.++...+ .. ..+..+.+|. + ...+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 367899997 99999999999999 99999999986554332 21 1233445553 1 2357
Q ss_pred CCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhc-CCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+++..... + +.+.+ +.++ .... ...++|++||...+.... .
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~ 148 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP-----------E 148 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------C
Confidence 99999999864321 1 11111 1111 1122 236899999865432110 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...|.+.+.+ + .+.++|+.+..+
T Consensus 149 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 188 (256)
T PRK08643 149 L--AVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTP 188 (256)
T ss_pred C--chhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCh
Confidence 2 57999998887665543 2 588999998765
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.7e-09 Score=91.91 Aligned_cols=138 Identities=9% Similarity=-0.010 Sum_probs=88.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~ 143 (268)
+..++++|||+ |+||++++++|+++ |++|++++|+.++...+.+ ..+.++.+|. + ....+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34578999996 99999999999999 9999999987654433221 2344555554 1 12468
Q ss_pred CEEEEccCCCCCC-------C---hHHHH-------HHHH---HH--hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL-------D---YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~-------~---~~~~~-------~~~~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+|+..... + +.+.+ .+++ .. .....++|++||...+.... ..
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~-----------~~ 154 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP-----------DT 154 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC-----------CC
Confidence 9999999864211 0 11111 1111 10 12236899999876543210 11
Q ss_pred CCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.+. ..+++|+.+.++.
T Consensus 155 --~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 155 --EAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred --cchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 579999999987776542 5788999998753
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4e-09 Score=94.92 Aligned_cols=137 Identities=17% Similarity=0.151 Sum_probs=88.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cCC--ceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~~--i~~~~~D~---~-----------~~~ 141 (268)
..++++|+|+ |.||++++++|+++ |++|++++|+.++.+.+. ..+ +..+.+|. + ...
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3478999997 99999999999999 999999999876544332 112 33444553 1 234
Q ss_pred CCCEEEEccCCCCCC-------Ch---HHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL-------DY---PGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~-------~~---~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
.+|+|||+|+..... ++ ...+ +.++ ..+.+..++|++||.+.+... .+
T Consensus 117 ~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~p- 187 (293)
T PRK05866 117 GVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--------SP- 187 (293)
T ss_pred CCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------CC-
Confidence 899999999864321 11 0000 1111 124567899999997665421 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|.+.+.+.+.. + +++++||.+-.+
T Consensus 188 -~~--~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~ 228 (293)
T PRK05866 188 -LF--SVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATP 228 (293)
T ss_pred -Cc--chHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCc
Confidence 11 57999999887765543 2 578899876443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.2e-09 Score=92.35 Aligned_cols=139 Identities=12% Similarity=0.016 Sum_probs=89.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||+|+ |+||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + ....
T Consensus 12 ~k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 12 GKTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 478999997 99999999999999 999999999765443321 11 233455554 1 1247
Q ss_pred CCEEEEccCCCCCC-----C---hHHH-------HHHHH---H----HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL-----D---YPGD-------VRLAA---L----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~~~-------~~~~~---~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.|+|||+++..... . +.+. ..+++ . ...+.++||++||...+...... ..+
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~ 162 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMD 162 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccC
Confidence 89999999853211 0 1111 11111 1 12356799999997655432110 012
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|+..|.+++.+ + ..+++|+.+-.+
T Consensus 163 ~--~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~ 202 (259)
T PRK08213 163 T--IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTK 202 (259)
T ss_pred c--chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCc
Confidence 2 57999999999887754 2 578889887654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.3e-09 Score=92.20 Aligned_cols=135 Identities=16% Similarity=0.030 Sum_probs=86.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--CceeeccCc---c----c----cCCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E----A----TQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~i~~~~~D~---~----~----~~~~D~Vi~~ 149 (268)
|++++|||+ |.||++++++|+++ |++|++++|++++.+++... .+..+.+|. + . ....|.+||+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 568999997 99999999999999 99999999987665554332 345555554 1 1 1346899999
Q ss_pred cCCCCC-C----C---hHHH-------HHHHH---H-HhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 150 APPSRS-L----D---YPGD-------VRLAA---L-SWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 150 a~~~~~-~----~---~~~~-------~~~~~---~-~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
++.... + + +.+. ..++. . .....+++|++||.. .++. | ....|+.+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------------~-~~~~Y~as 144 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-------------P-RAEAYGAS 144 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC-------------C-CCchhhHH
Confidence 874211 1 1 1111 11111 1 112346789888853 3221 1 11579999
Q ss_pred HHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 210 LLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 210 K~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
|...|.+.+.+ + ++++||+.++++-
T Consensus 145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 99888776532 3 6889999999863
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=5e-09 Score=92.32 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=88.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc------CCceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~------~~i~~~~~D~---~-----------~~~ 141 (268)
..+++||+|+ |+||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 9999999998765443321 1344445553 1 135
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH-------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
++|+|||+|+...... +.+ +..++. .+..+.+++|++||..-+. +..
T Consensus 87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~-----------~~~ 155 (263)
T PRK07814 87 RLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL-----------AGR 155 (263)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC-----------CCC
Confidence 7999999998532211 111 111111 0124567899999853211 111
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
+. +.|+.+|...|.+.+.+. ++.++|+.+..+
T Consensus 156 ~~--~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~ 195 (263)
T PRK07814 156 GF--AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS 195 (263)
T ss_pred CC--chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence 22 679999999988777543 477889887654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.1e-09 Score=90.40 Aligned_cols=136 Identities=12% Similarity=0.048 Sum_probs=88.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchh----hhcCC--ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDE----LINMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~----l~~~~--i~~~~~D~---~-----------~~~ 141 (268)
.++|+|+|+ |.||+.++++|.++ |++ |++++|++++... +...+ +..+.+|. + ...
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 468999997 99999999999999 999 9999997654432 22222 33344443 1 124
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHH----H--HHhc-CCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLA----A--LSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~----~--~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
++|+|||+++...... +.+ ...++ + ..+. ...++|++||...|+...
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~----------- 152 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP----------- 152 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC-----------
Confidence 7999999998643211 111 11111 1 1122 246899999988765321
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...|.+.+.+. .+.++|+.++++.
T Consensus 153 ~~--~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 153 FL--AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 12 579999999888776431 5788999998875
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.8e-09 Score=90.87 Aligned_cols=137 Identities=13% Similarity=0.003 Sum_probs=84.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
|+++||+|+ |+||++++++|+++ |++|+++ .|++++..+. ... .+..+.+|. + ...
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 568999997 99999999999999 9999875 5654433222 211 234445553 1 235
Q ss_pred CCCEEEEccCCCCCC----C-hHHHHH---------------HHH---HHh--cCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL----D-YPGDVR---------------LAA---LSW--NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~-~~~~~~---------------~~~---~~~--~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
..|+|||+++..... + ..+... ..+ .+. ....+||++||...+....
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~-------- 150 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP-------- 150 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC--------
Confidence 789999999853211 0 011111 011 011 1235799999975432110
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
... ..|+.+|...|.+++.. + .+++||+.+|++.
T Consensus 151 --~~~--~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 151 --GEY--VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred --Ccc--cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 011 35888898888766533 2 5899999999984
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=8.6e-09 Score=90.09 Aligned_cols=133 Identities=12% Similarity=-0.022 Sum_probs=86.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
.+++||+|+ |.||++++++|.++ |++|+.++|+.++ ......++.+.+|. + ....+|+|||
T Consensus 6 ~k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 6 GRVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999997 99999999999999 9999999997654 11122455555553 1 1356899999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH------HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 149 CAPPSRSLD--------YPGDV-------RLAA------LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~~~------~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
+|+...... +.+.+ ..+. .. +.+..++|++||...+... ... ..|
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----------~~~--~~Y 148 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS-----------PGT--AAY 148 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC-----------CCC--chh
Confidence 998532111 11111 1111 01 1244789999997654321 112 579
Q ss_pred HHHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 207 TDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 207 ~~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
+.+|...|.+++... ...++|+.+..+
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~ 183 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTE 183 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccCh
Confidence 999999988776542 467889988755
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-08 Score=89.44 Aligned_cols=135 Identities=10% Similarity=-0.002 Sum_probs=83.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchhh----hc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDEL----IN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~l----~~--~~i~~~~~D~---~-----------~~~ 141 (268)
++++||||+ |+||++++++|.++ |++|+++++.. +..+.+ .. ..+.++.+|. + ...
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 99998877643 222221 11 2344555654 1 134
Q ss_pred CCCEEEEccCCCCCC---C-----hHH-------HHHHHH---H---HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~-------~~~~~~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+..... + +.+ +...+. . ...+.+++|+++|...+.. .|
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~------------~p 154 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL------------NP 154 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC------------CC
Confidence 689999999853221 1 111 111111 0 1223467888877554331 12
Q ss_pred CCCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
. ...|+.+|...|.+.+.+. .+.++||.++..
T Consensus 155 ~-~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~ 194 (258)
T PRK09134 155 D-FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPS 194 (258)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCC
Confidence 1 1479999988887766542 577899988754
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.3e-09 Score=90.72 Aligned_cols=138 Identities=15% Similarity=0.065 Sum_probs=87.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc---c-----------ccCCCCE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
+.+++|+|+|+ |+||.+++++|.++ |++|++++|+.++.+.+. ..+...+.+|. + ....+|+
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34578999997 99999999999999 999999999865543322 22223444443 1 1247899
Q ss_pred EEEccCCCCC--C---C-----hHHHHH-----------HHH--HHhcCCCeEEEEccC-eeecCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRS--L---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 146 Vi~~a~~~~~--~---~-----~~~~~~-----------~~~--~~~~gvkr~V~~SS~-~vYg~~~~~~~~E~~~~~p~ 201 (268)
|||+++.... . + +.+.+. .++ ..+.+..++|++||. ++|+... +.
T Consensus 83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~-----------~~ 151 (255)
T PRK06057 83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-----------SQ 151 (255)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC-----------CC
Confidence 9999985321 0 0 111111 111 123455689999885 4555310 11
Q ss_pred CCCHHHHHHHHHHHHHHH----c---C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~----~---~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...+.+.+. + + .+++|||.+.++.
T Consensus 152 --~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 152 --ISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL 191 (255)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence 4688889766555442 2 2 6899999998774
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=9.5e-09 Score=90.00 Aligned_cols=137 Identities=11% Similarity=-0.009 Sum_probs=90.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--------CCceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--------~~i~~~~~D~---~-----------~ 139 (268)
..++++|+|+ |.||+.++++|.++ |++|++++|+.++.+++.. ..+..+.+|. + .
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578999997 99999999999999 9999999998765443321 1233444553 1 2
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...+|+|||+++...... +.+. ...++ .++.+.+++|++||...+...
T Consensus 86 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~----------- 154 (257)
T PRK09242 86 WDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV----------- 154 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-----------
Confidence 457999999998632211 1111 11111 123456799999997665422
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...+.+++.. + .+.++|+.+..+.
T Consensus 155 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 155 RSG--APYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred CCC--cchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 112 46888998888776643 2 5888999998764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.6e-09 Score=91.69 Aligned_cols=134 Identities=11% Similarity=0.025 Sum_probs=86.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---cCCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||+|+ |.||++++++|.++ |++|++++|+.+...... ...+..+..|. + .....|+
T Consensus 15 ~k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 15 GKVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 999999999765322111 12233444553 1 1347899
Q ss_pred EEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCee-ecCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~~~p~~~ 203 (268)
|||+++...... +.+ +..++. ..+.+.+++|++||... ++.. ..
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~-- 158 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE------------RH-- 158 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC------------CC--
Confidence 999998643211 111 111111 12345689999999753 3311 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.. + ...++|+.+..+
T Consensus 159 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 197 (255)
T PRK06841 159 VAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTE 197 (255)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCc
Confidence 47899998877666543 2 588899988765
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.6e-09 Score=102.33 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=117.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch---hhh------------c------CCceeeccCc--
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD---ELI------------N------MGITPSLKWT-- 137 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~---~l~------------~------~~i~~~~~D~-- 137 (268)
..++|+|||+ ||+|.-|+++|+...|.. +++.+.|.....+ .++ + ..+.++.+|.
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 3578999997 999999999999875554 6778887543221 111 0 1233344442
Q ss_pred --------c---ccCCCCEEEEccCCCCCCC--------hHHHHHHHH---HHhcCCCeEEEEccCeeecCCC----CCC
Q 024417 138 --------E---ATQKFPYVIFCAPPSRSLD--------YPGDVRLAA---LSWNGEGSFLFTSSSAIYDCSD----NGA 191 (268)
Q Consensus 138 --------~---~~~~~D~Vi~~a~~~~~~~--------~~~~~~~~~---~~~~gvkr~V~~SS~~vYg~~~----~~~ 191 (268)
+ ...++|+|||+|+....++ ...+.++++ .+....+-+|++||..+. +.. +.+
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i~E~~ 169 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHIEEKP 169 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-cccccccccc
Confidence 1 3578999999999876544 223444443 234567899999999876 221 111
Q ss_pred CCCCCCCC------------------------CCCCCHHHHHHHHHHHHHHHcC----ceEEEeCceecCCCcHHHHHH-
Q 024417 192 CDEDSPVV------------------------PIGRSPRTDVLLKAEKVILEFG----GCVLRLAGLYKADRGAHVYWL- 242 (268)
Q Consensus 192 ~~E~~~~~------------------------p~~~~~y~~sK~~aE~~l~~~~----~tIlRp~~vyG~~~~~~~~~l- 242 (268)
+.+....+ ....+.|.-+|..+|+++.+.. .+|+||+.|...-..++..|+
T Consensus 170 y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWid 249 (467)
T KOG1221|consen 170 YPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWID 249 (467)
T ss_pred cCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccc
Confidence 11111000 0112557778999999998875 799999999876544433332
Q ss_pred ------------HcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 243 ------------QKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 243 ------------~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|.+ ..+.+...++|-+|.++.++
T Consensus 250 n~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ 289 (467)
T KOG1221|consen 250 NLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAM 289 (467)
T ss_pred cCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHH
Confidence 23433 46778889999999998875
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.8e-09 Score=88.90 Aligned_cols=136 Identities=12% Similarity=-0.019 Sum_probs=87.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCcc--------------ccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWTE--------------ATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~~--------------~~~~~ 143 (268)
.++|+|+|+ |+||.++++.|+++ |++|++++|++++.+.+.. .+++.+.+|.. ....+
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 99999999999999 9999999998765544311 13455556541 13467
Q ss_pred CEEEEccCCCCCCC--hHHHHHH---------------HHHHhcCCCeEEEEccCee-ecCCCCCCCCCCCCCCCCCCCH
Q 024417 144 PYVIFCAPPSRSLD--YPGDVRL---------------AALSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--~~~~~~~---------------~~~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~~~p~~~~~ 205 (268)
|.+||+++...... ..+.+.. ++.......++|++||... ++. ..+. ..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~~--~~ 149 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPDQ--LS 149 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCCc--hH
Confidence 99999998543211 1111111 1101112357999988643 221 1122 46
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
|+.+|...|.+++.. + ++++||++++++-
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 999998777655432 2 6999999999863
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.00 E-value=8.9e-09 Score=89.05 Aligned_cols=134 Identities=9% Similarity=0.012 Sum_probs=85.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
++++||+|+ |+||++++++|+++ |+.|+..+|+.++.+.+.. ..++.+.+|. + ....+|+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 99999999999999 9999988887665544322 2344455553 1 1357999
Q ss_pred EEEccCCCCCC--------ChHH-------HHHHHH------HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL--------DYPG-------DVRLAA------LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 146 Vi~~a~~~~~~--------~~~~-------~~~~~~------~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~~~ 203 (268)
|||+++..... ++.+ +...++ ..+.+.+++|++||.. .|+.. ..
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~~-- 149 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNP------------GQ-- 149 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCC------------CC--
Confidence 99999864321 1111 111111 1224567999999964 44421 01
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...+.+.+.. + .++++|+.+..+
T Consensus 150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~ 188 (245)
T PRK12936 150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESA 188 (245)
T ss_pred cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCc
Confidence 45788887666554432 2 688999987654
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.1e-08 Score=88.29 Aligned_cols=136 Identities=13% Similarity=0.104 Sum_probs=85.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchhhh-cCCceeeccCc---c-------ccCCCCEEEEcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI-NMGITPSLKWT---E-------ATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~l~-~~~i~~~~~D~---~-------~~~~~D~Vi~~a 150 (268)
.++|||+|+ |.||++++++|+++ |++|+.+.|. .++.+++. ..+++.+..|. + .....|+|||++
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 478999997 99999999999999 9999887663 33333332 22455555553 1 234689999999
Q ss_pred CCCCCCC--------hHHHH-------HHHH----HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 024417 151 PPSRSLD--------YPGDV-------RLAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (268)
Q Consensus 151 ~~~~~~~--------~~~~~-------~~~~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~ 211 (268)
+...... +.+.+ ..++ .......++|++||..... .+..+. ..|+.+|.
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~--~~Y~~sKa 151 (237)
T PRK12742 84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAGM--AAYAASKS 151 (237)
T ss_pred CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCCC--cchHHhHH
Confidence 8643211 11111 1111 1112346899999864311 111122 57999999
Q ss_pred HHHHHHHHc-------C--ceEEEeCceecC
Q 024417 212 KAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 212 ~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|.+++.+ + +++++||.+..+
T Consensus 152 a~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~ 182 (237)
T PRK12742 152 ALQGMARGLARDFGPRGITINVVQPGPIDTD 182 (237)
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEecCcccCC
Confidence 999877653 2 588999988765
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.2e-09 Score=89.18 Aligned_cols=131 Identities=14% Similarity=0.055 Sum_probs=82.8
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccch----hhhcCC--ceeeccCc---c-----------ccCCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHD----ELINMG--ITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~----~l~~~~--i~~~~~D~---~-----------~~~~~D 144 (268)
|||+|+ |+||++++++|.++ |++|++++|+. +... .+...+ +..+.+|. + ....+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 578986 99999999999999 99999999875 2221 122223 33445553 1 124689
Q ss_pred EEEEccCCCCCCC--------hHHH-------HHHHH---H---HhcCCCeEEEEccC-eeecCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGD-------VRLAA---L---SWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~-------~~~~~---~---~~~gvkr~V~~SS~-~vYg~~~~~~~~E~~~~~p~~ 202 (268)
+|||+++...... +.+. ...++ . ...+.+++|++||. ++||.. +.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~------------~~- 145 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNA------------GQ- 145 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCC------------CC-
Confidence 9999998643211 1111 11111 0 12456799999996 455521 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.. + .+++||+.+.++
T Consensus 146 -~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~ 184 (239)
T TIGR01830 146 -ANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTD 184 (239)
T ss_pred -chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCCh
Confidence 46888888777665443 2 688999988765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.9e-09 Score=89.07 Aligned_cols=162 Identities=16% Similarity=0.065 Sum_probs=98.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||+|+ |.||+.+++.|+++ |++|++++|++++.+.. ... .+..+..|. + ....
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 368999997 99999999999999 99999999986543322 111 233444553 1 1246
Q ss_pred CCEEEEccCCCCC------------CC-hHHHHH-----H----------HH--H-HhcCCCeEEEEccCeeecCCCCCC
Q 024417 143 FPYVIFCAPPSRS------------LD-YPGDVR-----L----------AA--L-SWNGEGSFLFTSSSAIYDCSDNGA 191 (268)
Q Consensus 143 ~D~Vi~~a~~~~~------------~~-~~~~~~-----~----------~~--~-~~~gvkr~V~~SS~~vYg~~~~~~ 191 (268)
.|+|||+++.... .+ ..+... + .. . +.....++|++||...|+..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~---- 158 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM---- 158 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC----
Confidence 8999999984221 00 001110 0 11 1 11233579999998776531
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcc
Q 024417 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLI 258 (268)
Q Consensus 192 ~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~I 258 (268)
+. ..|+.+|.+.|.+++.+ + .+.++|+.+.++..... ...+.... ....+.
T Consensus 159 --------~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~ 222 (253)
T PRK08217 159 --------GQ--TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMI------PVGRLG 222 (253)
T ss_pred --------CC--chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcC------CcCCCc
Confidence 12 57999999888776543 2 68899999987643211 11111111 122356
Q ss_pred cHhhHhhcc
Q 024417 259 HYELPSRLQ 267 (268)
Q Consensus 259 hv~DlA~ai 267 (268)
+.+|+|+++
T Consensus 223 ~~~~~a~~~ 231 (253)
T PRK08217 223 EPEEIAHTV 231 (253)
T ss_pred CHHHHHHHH
Confidence 788888765
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.1e-08 Score=90.84 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=90.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.++++|+|+ |.||++++++|.++ |++|++++|+.+..+.+ ... .+..+.+|. + ....
T Consensus 10 ~k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 10 GKVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 99999999986544332 212 234455554 1 1358
Q ss_pred CCEEEEccCCCCCC------------------C-----hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecC
Q 024417 143 FPYVIFCAPPSRSL------------------D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDC 186 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~------------------~-----~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~ 186 (268)
+|+|||+|+..... + +.+.+. .++ ..+.+..++|++||...|..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 167 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP 167 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence 99999999842110 0 111111 111 12344678999999876642
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ... ..|+.+|...|.+.+.+ + ...++|+.+..+.
T Consensus 168 ~-----------~~~--~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 168 L-----------TKV--PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred C-----------CCC--chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 1 122 57999999988877654 2 5888999998763
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=8.6e-09 Score=90.25 Aligned_cols=136 Identities=12% Similarity=0.003 Sum_probs=89.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh---hhc--CCceeeccCc---c-----------ccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN--MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~---l~~--~~i~~~~~D~---~-----------~~~~~ 143 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+. +.. ..+..+.+|. + ....+
T Consensus 7 ~~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 7 DKVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 468999997 99999999999999 9999999998765421 211 1344455554 1 12478
Q ss_pred CEEEEccCCCCC---CC----hHHHHH-------HHH---H--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRS---LD----YPGDVR-------LAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 144 D~Vi~~a~~~~~---~~----~~~~~~-------~~~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|+|||+++.... +. +.+.+. .+. . .+.+..++|++||...+... .+. .
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~--~ 151 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ-----------GGT--S 151 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC-----------CCC--c
Confidence 999999985321 11 111111 111 0 12234689999997654211 112 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.|+.+|...|.+.+.+ + .+.+||+.++++.
T Consensus 152 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 152 GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 7999999998877654 2 5899999999874
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.4e-08 Score=89.38 Aligned_cols=131 Identities=7% Similarity=0.065 Sum_probs=86.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
+.+++||||+ |.||++++++|.++ |++|++++|+.+... .+..+.+|. + ....+|+||
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3478999997 99999999999999 999999999765432 334444443 1 235799999
Q ss_pred EccCCCCCC-----C---hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSL-----D---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~-----~---~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+|+..... + +.+.+ +.++ ..+.+..++|++||...+... ... ..|
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 144 (258)
T PRK06398 78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVT-----------RNA--AAY 144 (258)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCC-----------CCC--chh
Confidence 999853211 1 21111 1111 123456799999997665421 122 579
Q ss_pred HHHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 207 TDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 207 ~~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
+.+|...|.+.+.+. ...++||.+-.+
T Consensus 145 ~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 145 VTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred hhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 999998888776542 477888877543
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-09 Score=93.18 Aligned_cols=174 Identities=13% Similarity=0.033 Sum_probs=111.2
Q ss_pred eEEEEcc-cHHHHHHHH-----HHHhcC--CCCeEEEEeCCCCcchhhhcCCceeeccCcccc-CCCCEEEEccCCCCCC
Q 024417 86 DLLIVGP-GVLGRLVAE-----QWRQEH--PGCQIYGQTMTADHHDELINMGITPSLKWTEAT-QKFPYVIFCAPPSRSL 156 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~-----~L~~~~--~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~-~~~D~Vi~~a~~~~~~ 156 (268)
+-++-+. |+|++.|.- ++-+.+ ..|+|++++|.+.+.. +.+...|..-+ ..|+++++.++.....
T Consensus 14 ~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r------itw~el~~~Gip~sc~a~vna~g~n~l~ 87 (315)
T KOG3019|consen 14 DAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR------ITWPELDFPGIPISCVAGVNAVGNNALL 87 (315)
T ss_pred cCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc------cccchhcCCCCceehHHHHhhhhhhccC
Confidence 3445454 999988877 333320 1389999999886642 22222222112 2566677666643221
Q ss_pred ---C----hHHHH--------HHH---HHHhc-CCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024417 157 ---D----YPGDV--------RLA---ALSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (268)
Q Consensus 157 ---~----~~~~~--------~~~---~~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l 217 (268)
. +.+.+ ..+ +.... -.+.+|.+|..++|-+.....++|+.+-.. ++...+-.++.|...
T Consensus 88 P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg--fd~~srL~l~WE~aA 165 (315)
T KOG3019|consen 88 PIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG--FDILSRLCLEWEGAA 165 (315)
T ss_pred chhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC--hHHHHHHHHHHHHHh
Confidence 1 22111 112 11222 245799999999998877778899876433 245555566778777
Q ss_pred HHcC----ceEEEeCceecCCCcHHH-----HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 218 LEFG----GCVLRLAGLYKADRGAHV-----YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 218 ~~~~----~tIlRp~~vyG~~~~~~~-----~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+..+ .+++|.|.|.|.+.+.+. .++..|.+++.|.++++|||++|++..|
T Consensus 166 ~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li 224 (315)
T KOG3019|consen 166 LKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLI 224 (315)
T ss_pred hccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHH
Confidence 6654 699999999999876432 3456677889999999999999999764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.4e-08 Score=89.12 Aligned_cols=136 Identities=11% Similarity=0.021 Sum_probs=85.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchh----hhcCC--ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~----l~~~~--i~~~~~D~---~-----------~~~ 141 (268)
++++||+|+ |.||++++++|+++ |++|+.+.+.. +..+. +...+ +..+.+|. + ...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 568999997 99999999999999 99998886543 32222 22222 44455554 1 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhc-CCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+++...... +.+. ...++ ..+. ..+++|++||.... .+..
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~~ 148 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPLP 148 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCCC
Confidence 7899999998643211 1111 11111 1122 23689999986421 1122
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+. ..|+.+|...+.+++.+ + .+.++||.++.+.
T Consensus 149 ~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 149 GA--SAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 23 57999999888776543 2 5889999999773
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.7e-08 Score=88.47 Aligned_cols=135 Identities=16% Similarity=0.092 Sum_probs=89.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
..+++||+|+ |.||..++++|.++ |++|++++|+ ++.+.+ ... .+..+.+|. + ...
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 9999999987 332222 111 344555654 1 134
Q ss_pred CCCEEEEccCCCCCC--------ChHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL--------DYPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~--------~~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|++||+++..... ++.+.+. .++ ..+.+..++|++||...|.... .
T Consensus 91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 159 (258)
T PRK06935 91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK-----------F 159 (258)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC-----------C
Confidence 789999999864211 1111111 111 1234567999999987654221 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|.+.|.+.+.+ + .++++||.+..+
T Consensus 160 ~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 199 (258)
T PRK06935 160 V--PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTA 199 (258)
T ss_pred c--hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccccc
Confidence 1 47999999988877654 2 588999998765
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-08 Score=88.82 Aligned_cols=134 Identities=15% Similarity=0.051 Sum_probs=87.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchhhhcCCceeeccCc---c-----------ccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
.++++|+|+ |.||++++++|.++ |++|+++.++.+ ..+.+...++..+.+|. + .....|+||
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 368999997 99999999999999 999998876543 23344434555665554 1 235789999
Q ss_pred EccCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+++...... +.+. ++.++ ..+.+..++|++||...|+... ... ..|
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~----------~~~--~~Y 152 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA----------EGT--TFY 152 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC----------CCc--cHh
Confidence 9998642111 1111 11111 1234567999999987664210 011 579
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
+.+|.+.|.+.+.. + ..+++||.+-
T Consensus 153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~ 186 (255)
T PRK06463 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVE 186 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCC
Confidence 99999888776654 2 5788999874
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-08 Score=87.09 Aligned_cols=137 Identities=13% Similarity=0.067 Sum_probs=90.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-------cc--CCCCEEEEcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------AT--QKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-------~~--~~~D~Vi~~a 150 (268)
|++++|+|+ |.||++++++|.++ |++|++++|++++.+.+...+++.+.+|. + .+ ..+|+|||++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence 678999996 99999999999999 99999999987766666555556666654 1 12 2589999999
Q ss_pred CCCCC------C-C---hHH-------HHHHHH---HH--hcCCCeEEEEccC-eeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 151 PPSRS------L-D---YPG-------DVRLAA---LS--WNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 151 ~~~~~------~-~---~~~-------~~~~~~---~~--~~gvkr~V~~SS~-~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+.... + . +.+ ....++ .. .....++|++||. +.|+... ..+. ..|+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~~--~~Y~ 147 (222)
T PRK06953 79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---------GTTG--WLYR 147 (222)
T ss_pred CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------CCCc--cccH
Confidence 86421 0 0 111 111111 11 1223578898885 4455211 1111 3589
Q ss_pred HHHHHHHHHHHHcC-------ceEEEeCceecC
Q 024417 208 DVLLKAEKVILEFG-------GCVLRLAGLYKA 233 (268)
Q Consensus 208 ~sK~~aE~~l~~~~-------~tIlRp~~vyG~ 233 (268)
.+|...|.+++.+. .+.++|+.+.-+
T Consensus 148 ~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 148 ASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred HhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 99999998877652 588899988755
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.2e-08 Score=86.60 Aligned_cols=136 Identities=10% Similarity=0.026 Sum_probs=87.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhh-h-----cCCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDEL-I-----NMGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l-~-----~~~i~~~~~D~---~-----------~~~ 141 (268)
++++||+|+ |+||++++++|.++ |++|++++|+.+. .+.+ . ...+..+.+|. + ...
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 9999999997531 1111 1 11244555554 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+++...... +.+ ...++ + .+..+..+||++||...+... + .
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------~--~ 148 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---------F--G 148 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC---------C--C
Confidence 6999999998643210 111 11111 1 133457799999997655321 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+++.+ + .++++|+.+.++.
T Consensus 149 ~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 149 Q--TNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred C--hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 1 46889998777666543 2 5888999998763
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.5e-09 Score=89.55 Aligned_cols=133 Identities=16% Similarity=-0.008 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--CceeeccCc---c---c-c-----------CC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E---A-T-----------QK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~i~~~~~D~---~---~-~-----------~~ 142 (268)
||++||+|+ |+||++++++|.++ |++|++++|+.++.. .... .+..+.+|. + . + ..
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPSL-AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchhh-hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence 568999997 99999999999999 999999999765321 1111 244445553 1 1 1 25
Q ss_pred CCEEEEccCCCCC-C---C-hHHH---------------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS-L---D-YPGD---------------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-~~~~---------------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.|++||+++.... . + -.+. .+.++ ..+.+.+++|++||...+... .+
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 146 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------AG 146 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------CC
Confidence 7899999985321 0 0 0111 11111 123456799999997765321 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc------C--ceEEEeCceec
Q 024417 201 IGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYK 232 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~------~--~tIlRp~~vyG 232 (268)
. ..|+.+|...|.+++.+ + ...++|+.+-.
T Consensus 147 ~--~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t 184 (243)
T PRK07023 147 W--SVYCATKAALDHHARAVALDANRALRIVSLAPGVVDT 184 (243)
T ss_pred c--hHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCcccc
Confidence 2 57999999999888743 2 57788887743
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-08 Score=88.12 Aligned_cols=137 Identities=14% Similarity=0.066 Sum_probs=89.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~ 141 (268)
..+++||||+ |.||++++++|+++ |++|+.++|++++.+.+ ...+ +..+.+|. + ...
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 3568999997 99999999999999 99999999986654332 2222 33344453 1 134
Q ss_pred CCCEEEEccCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~--------~~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
..|+|||+++..... ++.+.+ +.+. ....+..++|++||...... ..+
T Consensus 86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~ 154 (254)
T PRK08085 86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-----------RDT 154 (254)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC-----------CCC
Confidence 689999999853211 111111 1111 12345679999998643211 011
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + ..+++||.+..+-
T Consensus 155 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 155 I--TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred C--cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 2 57899999988887765 2 5889999998763
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.5e-08 Score=89.80 Aligned_cols=138 Identities=13% Similarity=0.108 Sum_probs=88.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--ch----hhhcCC--ceeeccCc---c-----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HD----ELINMG--ITPSLKWT---E----------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~----~l~~~~--i~~~~~D~---~----------- 138 (268)
+.++++||||+ |+||++++++|+++ |++|++..++.+. .+ .+...+ +..+.+|. +
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999887765432 11 122222 33444553 1
Q ss_pred ccCCCCEEEEccCCCCC-C---C-----hHHHHH-------HHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRS-L---D-----YPGDVR-------LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~-~---~-----~~~~~~-------~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...++|+|||+|+.... . + +.+.+. .++ .. .....++|++||...|....
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 200 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP---------- 200 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC----------
Confidence 23579999999985321 1 1 111111 111 11 11235999999988775321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...|.+.+.+ + ..+++||.++++.
T Consensus 201 -~~--~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 201 -TL--LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred -Cc--hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 11 46999999888776643 2 6889999999874
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.9e-08 Score=88.17 Aligned_cols=135 Identities=12% Similarity=0.053 Sum_probs=87.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc----CCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~----~~i~~~~~D~---~-----------~~ 140 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + ..
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 468999997 99999999999999 99999999986654432 11 1233445554 1 23
Q ss_pred CCCCEEEEccCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--------~~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|++||+|+..... ++.+.+ +.++ ..+.+..++|++||...+... .
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 153 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII-----------P 153 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC-----------C
Confidence 5799999999853221 111111 1111 123455799999997543321 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+ + ...++||.+-.+
T Consensus 154 ~~--~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 154 GC--FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred Cc--hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 11 47999999888777654 2 578899988543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=2.1e-08 Score=87.60 Aligned_cols=136 Identities=14% Similarity=0.091 Sum_probs=88.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||+|+ |.||++++++|.++ |++|++++|++++.+.+. .. .+..+.+|. + ....
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 468999997 99999999999999 999999999876544332 22 233444553 1 1347
Q ss_pred CCEEEEccCCCCC-CC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+.... .. +.+.+ +.++ ..+.+..++|++||...+... ...
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------~~~ 153 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG----------FPG 153 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC----------CCC
Confidence 9999999985321 10 11111 1111 133456789999997654311 011
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...|.+.+.+ + ...++||.+-.+
T Consensus 154 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 154 M--AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred c--chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 2 57999999888776643 2 578899998654
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.8e-08 Score=87.58 Aligned_cols=135 Identities=10% Similarity=0.041 Sum_probs=89.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.++++|||+ |.||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ....
T Consensus 10 ~k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 10 GKIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 468999997 99999999999999 99999999887654332 222 244455664 1 2356
Q ss_pred CCEEEEccCCCCCC-----C---hHHHHH-----------HHH--HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL-----D---YPGDVR-----------LAA--LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~~~~~-----------~~~--~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p 200 (268)
.|+|||+++..... + +.+.+. .++ ..+.+..++|++||.. .++.. +
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~ 155 (265)
T PRK07097 88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE------------T 155 (265)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC------------C
Confidence 89999999864321 1 111110 111 1234568999999864 33211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + ++.++||.+..+.
T Consensus 156 ~--~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 156 V--SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred C--ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 2 57999999888777654 2 5889999998763
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.1e-08 Score=83.85 Aligned_cols=138 Identities=14% Similarity=0.099 Sum_probs=86.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-------cc--CCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-------AT--QKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-------~~--~~~D~Vi~~ 149 (268)
|++++|+|+ |+||+.++++|.++ |++|++++|++++.+.+.. .++....+|. + .+ .++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 578999997 99999999999999 9999999998776544432 2344444553 1 12 369999999
Q ss_pred cCCCCC-----CC-hHHHHH---------------HHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 150 APPSRS-----LD-YPGDVR---------------LAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 150 a~~~~~-----~~-~~~~~~---------------~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
++.... .+ ..+.+. .++. .+.+..+++++||. ++.... .+.... ..|+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~~------~~~~~~--~~Y~ 148 (225)
T PRK08177 79 AGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVEL------PDGGEM--PLYK 148 (225)
T ss_pred CcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--cccccc------CCCCCc--cchH
Confidence 975321 11 011111 1110 12234678888874 332110 011122 4699
Q ss_pred HHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 208 DVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 208 ~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
.+|...|.+++.+. ...++||.+-.+
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~ 183 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTD 183 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecC
Confidence 99999998877542 588899988654
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.9e-08 Score=86.56 Aligned_cols=135 Identities=15% Similarity=0.068 Sum_probs=87.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cCC--ceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~~--i~~~~~D~---~-----------~~~~ 142 (268)
.+++||+|+ |+||.+++++|.++ |++|++++|+.++.+.+. ..+ ...+.+|. + .+..
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 999999999865543322 112 33344443 1 2346
Q ss_pred CCEEEEccCCCC---C--C-C---hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSR---S--L-D---YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~---~--~-~---~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+++... . + . +.+.+. .++ ....+..++|++||..-+.. ..+
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~ 154 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GDF 154 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CCC
Confidence 899999998421 0 1 1 111111 111 12345679999998643221 112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...|.+++.+ + .+.+.||.+..+
T Consensus 155 ~--~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 155 Q--GIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred C--cchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 2 57999999999887754 2 588899888543
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.3e-08 Score=85.65 Aligned_cols=137 Identities=15% Similarity=0.079 Sum_probs=86.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC---CceeeccCc-----c-----------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM---GITPSLKWT-----E----------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~---~i~~~~~D~-----~----------- 138 (268)
..++++|+|+ |.||++++++|+++ |++|++++|++++.+.+. .. .+..+..|. +
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 3478999997 99999999999999 999999999876543321 11 112222221 0
Q ss_pred cc-CCCCEEEEccCCCCC----CC-----hHHHHH-------HHH------HHhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 139 AT-QKFPYVIFCAPPSRS----LD-----YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 139 ~~-~~~D~Vi~~a~~~~~----~~-----~~~~~~-------~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
.. ..+|+|||+|+.... .+ +.+.+. .++ ..+.+..++|++||.....
T Consensus 83 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~---------- 152 (239)
T PRK08703 83 ATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET---------- 152 (239)
T ss_pred HhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc----------
Confidence 12 578999999985311 11 111111 111 1234567999998843211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc--------C--ceEEEeCceecCC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF--------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~--------~--~tIlRp~~vyG~~ 234 (268)
+.... ..|+.+|...|.+++.+ + +.+++||.++++.
T Consensus 153 -~~~~~--~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 153 -PKAYW--GGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred -CCCCc--cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 11112 46999999988876543 1 5788999999874
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.1e-08 Score=86.44 Aligned_cols=135 Identities=14% Similarity=0.044 Sum_probs=87.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.++++|+|+ |.||++++++|.++ |++|++++|++++.+.+ ... .+..+.+|. + ....
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 99999999986654322 222 244455554 1 1346
Q ss_pred CCEEEEccCCCCC-C--------ChHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS-L--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-~--------~~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.|+|||+++.... . ++.+.+ +.++ ..+.+..++|++||...+.... .
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~ 153 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------K 153 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------C
Confidence 7999999985321 1 111111 1111 1234557899999987655321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
. ..|+.+|.+.|.+.+.+. ...++||.+-.+
T Consensus 154 ~--~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~ 193 (253)
T PRK06172 154 M--SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTD 193 (253)
T ss_pred C--chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccCh
Confidence 2 579999998887765432 577899988544
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.7e-08 Score=87.78 Aligned_cols=168 Identities=12% Similarity=0.021 Sum_probs=99.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chh----hhcCC--ceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG--ITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~----l~~~~--i~~~~~D~---~-----------~ 139 (268)
+..+++||+|+ |+||.+++++|+++ |++|+++.|+.+. .+. +...+ +..+.+|. + .
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999999987532 211 22222 33455554 1 1
Q ss_pred cCCCCEEEEccCCCCC----CC-----hHHHH-------HHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS----LD-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~~-----~~~~~-------~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...+|+|||+|+.... .+ +.+.+ .+++ .. .....++|++||...|....
T Consensus 122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~----------- 190 (290)
T PRK06701 122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE----------- 190 (290)
T ss_pred cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC-----------
Confidence 3478999999985321 11 11111 1111 11 11236899999988775321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH--HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA--HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~--~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.. ..|+.+|...|.+.+.+ + .+.+||+.++.+.... ....+.. .........+.+.+|+|+++
T Consensus 191 ~~--~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~---~~~~~~~~~~~~~~dva~~~ 264 (290)
T PRK06701 191 TL--IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQ---FGSNTPMQRPGQPEELAPAY 264 (290)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHH---HHhcCCcCCCcCHHHHHHHH
Confidence 11 46888998888766544 2 5889999998763211 0000100 01111233467888888765
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.2e-08 Score=84.36 Aligned_cols=137 Identities=15% Similarity=0.142 Sum_probs=93.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccC
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAP 151 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~ 151 (268)
++.||..+|+|+ |-.|+.|.+++++. |. ..|+++.|.....+. ....+.....|- ...++.|+.+.|.+
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~a-t~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPA-TDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCcc-ccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 345788999998 99999999999998 23 389998886421111 111222222221 36789999999988
Q ss_pred CCCCC-----------ChHHHHHHHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024417 152 PSRSL-----------DYPGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 152 ~~~~~-----------~~~~~~~~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
.++.. ||+-....+ +++.|+++|+.+||.+.- |..+-.|.+.|-+.|+.+.+.
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~-AKe~Gck~fvLvSS~GAd---------------~sSrFlY~k~KGEvE~~v~eL 156 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQA-AKEKGCKTFVLVSSAGAD---------------PSSRFLYMKMKGEVERDVIEL 156 (238)
T ss_pred ccccccccCceEeechHHHHHHHHH-HHhCCCeEEEEEeccCCC---------------cccceeeeeccchhhhhhhhc
Confidence 65431 133333333 377899999999997641 111145777888999998887
Q ss_pred C---ceEEEeCceecCCC
Q 024417 221 G---GCVLRLAGLYKADR 235 (268)
Q Consensus 221 ~---~tIlRp~~vyG~~~ 235 (268)
. .+|+|||.+.|...
T Consensus 157 ~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 157 DFKHIIILRPGPLLGERT 174 (238)
T ss_pred cccEEEEecCcceecccc
Confidence 6 79999999998754
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.9e-08 Score=88.13 Aligned_cols=136 Identities=11% Similarity=0.025 Sum_probs=86.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~ 141 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.+..+.+.. ..+..+.+|. + ...
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG 93 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 44578999997 99999999999999 9999999987654333211 1344555553 1 124
Q ss_pred CCCEEEEccCCCCC--C---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCe-eecCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS--L---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSP 197 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~--~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~ 197 (268)
++|+|||+|+.... . + +.+.+ .+++ ....+..++|++||.. .++..
T Consensus 94 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------- 163 (280)
T PLN02253 94 TLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGL---------- 163 (280)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCC----------
Confidence 79999999985321 1 0 11111 1111 0122345788888754 33321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+ ..|+.+|...|.+.+.+ + ..+++|+.+..+
T Consensus 164 -~~---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 164 -GP---HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred -CC---cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 11 46999999998877654 2 578899998765
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.1e-08 Score=87.55 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=82.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchh----hhcCC--ceeeccCc---c-----------c--
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINMG--ITPSLKWT---E-----------A-- 139 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~----l~~~~--i~~~~~D~---~-----------~-- 139 (268)
.+++||||+ |+||++++++|.++ |++|++.. |+.++.+. +...+ ...+..|. + .
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 468999997 99999999999999 99998875 44333222 22112 22222332 0 0
Q ss_pred ----cCCCCEEEEccCCCCCC---C-----hHHHHH-H------H----HHHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 ----TQKFPYVIFCAPPSRSL---D-----YPGDVR-L------A----ALSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ----~~~~D~Vi~~a~~~~~~---~-----~~~~~~-~------~----~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...+|+|||+|+..... + +.+.+. | + +.......++|++||...+...
T Consensus 82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (252)
T PRK12747 82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL--------- 152 (252)
T ss_pred hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC---------
Confidence 12699999999853211 1 111110 1 1 1111223599999998754321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + ...+.||.+.++
T Consensus 153 --~~~--~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~ 194 (252)
T PRK12747 153 --PDF--IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTD 194 (252)
T ss_pred --CCc--hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCc
Confidence 112 57999999998777643 2 578899999876
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.6e-08 Score=90.38 Aligned_cols=136 Identities=12% Similarity=0.099 Sum_probs=86.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~~ 142 (268)
.++|||||+ |.||++++++|.++ |++|++++|++++.+++ ...+ +..+.+|. + ....
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARR--GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 468999997 99999999999999 99999999987665432 2223 33334443 1 1357
Q ss_pred CCEEEEccCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|++||+|+...... +.+.+. .++ ..+.+..++|++||...|... |.
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~------------p~ 152 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ------------PY 152 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC------------CC
Confidence 999999998533211 111111 111 123455789999987654321 11
Q ss_pred CCCHHHHHHHHHHH----HHHHc----C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEK----VILEF----G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~----~l~~~----~--~tIlRp~~vyG~~ 234 (268)
...|+.+|...+. +..+. + .+.+.|+.+..+.
T Consensus 153 -~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~ 194 (330)
T PRK06139 153 -AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG 194 (330)
T ss_pred -chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence 1579999986443 33332 2 5788999998764
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.2e-08 Score=100.18 Aligned_cols=137 Identities=15% Similarity=0.148 Sum_probs=88.6
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--------CCceeeccCc---c--------
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT---E-------- 138 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--------~~i~~~~~D~---~-------- 138 (268)
+..+..+++||||+ |+||++++++|+++ |++|++++|+.+..+.+.. ..+..+.+|. +
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence 44455678999997 99999999999999 9999999998655433211 1233444553 1
Q ss_pred ---ccCCCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEccCee-ecCCCCCCC
Q 024417 139 ---ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAI-YDCSDNGAC 192 (268)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~v-Yg~~~~~~~ 192 (268)
...++|+|||+|+..... + +...+ +.++ .+..+ ..++|++||... ++..
T Consensus 487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~----- 561 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK----- 561 (676)
T ss_pred HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC-----
Confidence 234799999999864321 1 11111 0111 12223 358999999653 3311
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
.. ..|+.+|...|.+++.+ + +..++|+.++
T Consensus 562 -------~~--~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 562 -------NA--SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred -------CC--HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 12 58999999999887654 2 5788899887
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.8e-08 Score=86.55 Aligned_cols=133 Identities=14% Similarity=0.089 Sum_probs=84.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc---c-----------ccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~---~-----------~~~~~ 143 (268)
++++|+|+ |.||.+++++|+++ |++|+++.|+.++.+. +...+ +..+.+|. + ....+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899997 99999999999999 9999999997654332 22222 44455553 1 13468
Q ss_pred CEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcC-CCeEEEEccCee-ecCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAI-YDCSDNGACDEDSPVVP 200 (268)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~v-Yg~~~~~~~~E~~~~~p 200 (268)
|+|||+++..... + +.+.. +.++ ....+ .+++|++||... ++.. .
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~ 146 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------I 146 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC------------C
Confidence 9999999864221 1 11111 1111 12222 368999998643 3321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. +.|+.+|...|.+.+.. + .++++|+.+..+
T Consensus 147 ~--~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 147 L--SAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred C--cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCh
Confidence 2 57889999888777643 2 588899988654
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.3e-08 Score=89.79 Aligned_cols=146 Identities=10% Similarity=0.010 Sum_probs=90.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc----CCceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MGITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~----~~i~~~~~D~---~-----------~ 139 (268)
..++++|||+ |.||.+++++|.++ |++|+++.|+.++.+. +.. ..+..+.+|. + .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 3578999997 99999999999999 9999999998665432 211 1344555564 1 2
Q ss_pred cCCCCEEEEccCCCCC-------CChHHHH-----------HHHHH-HhcCCCeEEEEccCeee-cCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS-------LDYPGDV-----------RLAAL-SWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-------~~~~~~~-----------~~~~~-~~~gvkr~V~~SS~~vY-g~~~~~~~~E~~~~~ 199 (268)
...+|++||+|+.... +++...+ +.++. -..+..++|++||...+ +......++++.+..
T Consensus 91 ~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~ 170 (313)
T PRK05854 91 GRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYA 170 (313)
T ss_pred CCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCc
Confidence 3569999999985321 1121111 11110 12234689999987543 322222334443433
Q ss_pred CCCCCHHHHHHHHHHHHHHHc---------C--ceEEEeCceec
Q 024417 200 PIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYK 232 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vyG 232 (268)
+. ..|+.+|++.+.+.+++ + ...+.||.+..
T Consensus 171 ~~--~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 171 GM--RAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred ch--hhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 43 67999998887665432 2 47778888754
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=2.1e-08 Score=87.19 Aligned_cols=137 Identities=15% Similarity=0.028 Sum_probs=83.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchh----hhcC--CceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~----l~~~--~i~~~~~D~---~-----------~~ 140 (268)
+|++|||+|+ |+||..++++|.++ |++|+.+. |++++.+. +... .+..+.+|. + ..
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 3678999997 99999999999999 99998765 44333222 2111 344555553 1 13
Q ss_pred CCCCEEEEccCCCCCC----C-----hHHHH-------HHHH---HH---hcC---CCeEEEEccCee-ecCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL----D-----YPGDV-------RLAA---LS---WNG---EGSFLFTSSSAI-YDCSDNGACDE 194 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~----~-----~~~~~-------~~~~---~~---~~g---vkr~V~~SS~~v-Yg~~~~~~~~E 194 (268)
..+|+|||+|+..... + +.+.+ ..++ .. ..+ -.++|++||... ++...
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------ 152 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------ 152 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC------
Confidence 5799999999853211 1 11100 0111 11 111 246999998653 33210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...+.+.+.+ + ++++|||.+..+.
T Consensus 153 -----~~--~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 153 -----EY--VDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred -----CC--cccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 11 35888998888665432 2 6899999998763
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.3e-08 Score=86.36 Aligned_cols=134 Identities=13% Similarity=0.048 Sum_probs=87.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.++++||||+ |.||+.++++|+++ |++|++++|+ ++.+. +... .+..+.+|. + ...
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 9999999998 44322 2222 244555553 1 235
Q ss_pred CCCEEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..|++||+|+.... . + +.+.+ +.++ ..+.+ .++|++||...+....
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----------- 149 (272)
T PRK08589 82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADL----------- 149 (272)
T ss_pred CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCC-----------
Confidence 78999999986421 1 1 11111 0111 12333 6999999976543210
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...+.+.+.+ + ...+.||.+..+
T Consensus 150 ~~--~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 150 YR--SGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 11 57999999888877654 2 588899988754
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-07 Score=83.27 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=86.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chh----hhcCC--ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~----l~~~~--i~~~~~D~---~-----------~~~ 141 (268)
.+++||+|+ |.||++++++|.++ |++|++++|+.++ .+. +...+ +..+.+|. + ...
T Consensus 8 ~k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 8 GQVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999996 99999999999999 9999999997543 222 22222 34444553 1 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
..|+|||+++...... +.+.+ +.++ ....+..++|++||..-+..... .+
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~---------~~ 156 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG---------LL 156 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC---------CC
Confidence 6899999998643211 11111 1111 12345579999998754321110 01
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...+.+.+.. + ..+++||.+..+
T Consensus 157 ~--~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~ 196 (254)
T PRK06114 157 Q--AHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATP 196 (254)
T ss_pred c--chHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCc
Confidence 1 57899998888766544 2 578899998776
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.8e-08 Score=85.71 Aligned_cols=136 Identities=11% Similarity=0.020 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---hhhcC--CceeeccCc---c-----------ccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINM--GITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~l~~~--~i~~~~~D~---~-----------~~~~~ 143 (268)
.++++|+|+ |+||++++++|+++ |++|++++|+.+..+ .+... .+..+.+|. + .....
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999996 99999999999999 999999999754221 12222 244455554 1 23578
Q ss_pred CEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|+|||+++...... +.+.+ ..++ ....+..++|++||...... +....
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~~~~~- 152 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------ADPGE- 152 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------CCCCc-
Confidence 99999998532211 11111 1111 11335578999998542100 00012
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + .+.++||.+.++
T Consensus 153 -~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~ 191 (263)
T PRK08226 153 -TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTP 191 (263)
T ss_pred -chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCH
Confidence 57999999888776644 2 578899998875
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.9e-08 Score=84.99 Aligned_cols=137 Identities=15% Similarity=0.089 Sum_probs=86.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC---CceeeccCc----------------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM---GITPSLKWT---------------- 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~---~i~~~~~D~---------------- 137 (268)
...++|||+|+ |+||.+++++|+++ |++|++++|+.++.+.+ ... .+..+..|.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 34578999997 99999999999999 99999999986543332 211 122332332
Q ss_pred cccCCCCEEEEccCCCCC-----C-C---hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 138 EATQKFPYVIFCAPPSRS-----L-D---YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~~~-----~-~---~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
+....+|+|||+|+.... + + +.+ + ++.++ ..+.+.++||++||...+...
T Consensus 88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~-------- 159 (247)
T PRK08945 88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR-------- 159 (247)
T ss_pred HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC--------
Confidence 123578999999975321 1 0 111 1 11111 134567899999996533211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
+ .. ..|+.+|...|.+++.+. .++++|+.+-.+
T Consensus 160 -~--~~--~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 160 -A--NW--GAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred -C--CC--cccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 0 11 468999999998776542 467788877443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.8e-08 Score=84.56 Aligned_cols=137 Identities=12% Similarity=0.099 Sum_probs=87.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~ 140 (268)
+.+++|||+|+ |.||++++++|.++ |++|++++|+.+..+.+ ... .+..+.+|. + ..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL 86 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44678999997 99999999999999 99999999876554332 212 233344553 1 23
Q ss_pred CCCCEEEEccCCCCC---CC----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS---LD----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~---~~----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
...|+|||+++.... +. +.+.+ .+++ ..+.+..++|++||...+.. ..+
T Consensus 87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~ 155 (255)
T PRK06113 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NIN 155 (255)
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------CCC
Confidence 578999999985321 11 11111 1111 12334569999999764321 112
Q ss_pred CCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
. ..|+.+|.+.|.+++... ..++.||.+--+
T Consensus 156 ~--~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~ 195 (255)
T PRK06113 156 M--TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_pred c--chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccc
Confidence 2 579999999998876542 477788877644
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=6.3e-08 Score=84.03 Aligned_cols=136 Identities=10% Similarity=0.104 Sum_probs=84.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcc----hhhhcCC--ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHH----DELINMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~----~~l~~~~--i~~~~~D~---~-----------~~~ 141 (268)
.+.+||+|+ |+||++++++|+++ |++|++..+ +..+. +.+...+ +..+.+|. + ...
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 357899997 99999999999999 999988654 32222 1122223 33334553 1 235
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
++|+|||+++...... +.+ . ++.++ ..+.+.+++|++||....... ..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 149 (246)
T PRK12938 81 EIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ-----------FG 149 (246)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC-----------CC
Confidence 7999999998643211 111 1 11111 134567899999986432110 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + +..++|+.+.++.
T Consensus 150 ~--~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 150 Q--TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred C--hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence 2 57899998777655443 2 6889999998763
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.9e-08 Score=83.08 Aligned_cols=133 Identities=14% Similarity=0.042 Sum_probs=85.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhhcCCceeeccCc---c-----------ccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINMGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
++++||+|+ |.||++++++|+++ |++|++++|++++. +.+...++..+.+|. + .....|++|
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 468999997 99999999999999 99999999986542 333344555555554 1 234699999
Q ss_pred EccCCCCCC---C-----hHHHHH-----------HHH--HHhcC--CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 148 FCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 148 ~~a~~~~~~---~-----~~~~~~-----------~~~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|+|+..... + +.+.+. .++ ..+.+ ..++|++||...... .... .
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~~--~ 146 (236)
T PRK06483 80 HNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG-----------SDKH--I 146 (236)
T ss_pred ECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC-----------CCCC--c
Confidence 999853211 1 111110 111 12222 468999988543211 0012 5
Q ss_pred HHHHHHHHHHHHHHHcC--------ceEEEeCcee
Q 024417 205 PRTDVLLKAEKVILEFG--------GCVLRLAGLY 231 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~~--------~tIlRp~~vy 231 (268)
.|+.+|...|.+.+.+. +..++|+.+.
T Consensus 147 ~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 147 AYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 79999999998876542 5778899874
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.7e-08 Score=85.11 Aligned_cols=135 Identities=10% Similarity=-0.013 Sum_probs=87.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||+|+ |.||++++++|.++ |++|++++|+.++.+++.. ..+..+.+|. + ....+|+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 478999997 99999999999999 9999999998765444322 1244555554 1 2357899
Q ss_pred EEEccCCCCCC-------ChHHHHH-H------H----HHH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 146 VIFCAPPSRSL-------DYPGDVR-L------A----ALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 146 Vi~~a~~~~~~-------~~~~~~~-~------~----~~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|||+|+..... ++.+.+. | + +.. ..+..++|++||...+-... .. ..|
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~--~~Y 150 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------GR--WLY 150 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------CC--chh
Confidence 99999853211 1211111 1 1 101 13446899999865422110 11 468
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+.+|...+.+.+.. + +..++||.+..+
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 88998887766543 2 588899987654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.3e-08 Score=85.16 Aligned_cols=135 Identities=14% Similarity=0.038 Sum_probs=84.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c----------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E----------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~----------~~~~~D 144 (268)
.+++||+|+ |+||+.++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ....+|
T Consensus 5 ~~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 5 DKRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 468999996 99999999999999 9999999998765444321 1344555553 1 135789
Q ss_pred EEEEccCCCCCC---C-----hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+..... + +.+ +..++. ....+..++|++||...+... + +.
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~-~~ 149 (263)
T PRK09072 83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------------P-GY 149 (263)
T ss_pred EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC------------C-Cc
Confidence 999999864321 1 111 111111 123345689999886432111 1 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...+.+++.. + ++.+.|+.+..+
T Consensus 150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~ 188 (263)
T PRK09072 150 ASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA 188 (263)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence 57899998776655433 2 577888887654
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=9.3e-08 Score=82.40 Aligned_cols=133 Identities=14% Similarity=0.038 Sum_probs=85.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------~~~~~~D~Vi~~a~~~~ 154 (268)
.++++|+|+ |.||++++++|+++ |++|++++|++.... ...+..+.+|. +....+|+|||+++...
T Consensus 5 ~k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 5 TKTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPDL---SGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCccccc---CCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 468999997 99999999999999 999999999754321 12344555553 13568999999998431
Q ss_pred ----CCC-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 024417 155 ----SLD-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (268)
Q Consensus 155 ----~~~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~ 212 (268)
..+ +.+.+ .++. ..+.+..++|++||...+.... .. ..|+.+|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~~--~~Y~~sK~a 146 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGG-----------GG--AAYTASKHA 146 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC-----------CC--cccHHHHHH
Confidence 111 11111 1111 1234457899999976432110 11 468888887
Q ss_pred HHHHHHHc-------C--ceEEEeCceecCC
Q 024417 213 AEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 213 aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.|.+.+.. + .++++|+.+..+.
T Consensus 147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 77665532 2 5889999997763
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=5.4e-08 Score=94.47 Aligned_cols=136 Identities=12% Similarity=0.055 Sum_probs=89.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~ 140 (268)
++.+++||+|+ |+||++++++|.++ |++|++++|+.++.+.+ ... ++..+.+|. + ..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 45578999997 99999999999999 99999999986554432 222 244455554 1 13
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+|+...... +.+ +..++. ..+.+ ..++|++||...|....
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------- 460 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR---------- 460 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC----------
Confidence 46899999998643211 111 111111 12233 36899999988775321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
.. ..|+.+|.+.|.+.+.. + .++++||.+-.
T Consensus 461 -~~--~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 461 -SL--PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred -CC--cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 12 57999999877665432 2 68889998854
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.3e-07 Score=82.88 Aligned_cols=136 Identities=11% Similarity=-0.015 Sum_probs=86.3
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCC-----------cc----hhhhc--CCceeeccCc---c-
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD-----------HH----DELIN--MGITPSLKWT---E- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~-----------~~----~~l~~--~~i~~~~~D~---~- 138 (268)
++++|||+|+ | .||..++++|+++ |++|++++|++. .. ..+.. ..+.++.+|. +
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3468999997 4 6999999999999 999999998721 11 11111 1245555554 1
Q ss_pred ----------ccCCCCEEEEccCCCCCCC----hHHHHH-----------HHH---H---HhcCCCeEEEEccCeeecCC
Q 024417 139 ----------ATQKFPYVIFCAPPSRSLD----YPGDVR-----------LAA---L---SWNGEGSFLFTSSSAIYDCS 187 (268)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~----~~~~~~-----------~~~---~---~~~gvkr~V~~SS~~vYg~~ 187 (268)
....+|+|||+|+...... -.+.++ .++ . ...+.+++|++||...|.+.
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 1357899999998532211 011111 111 1 12245689999997665421
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 188 ~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+++.. + .+.++|+.+..+
T Consensus 162 -----------~~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~ 203 (256)
T PRK12748 162 -----------PDE--LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTG 203 (256)
T ss_pred -----------CCc--hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCC
Confidence 112 57999999999876653 2 689999987654
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-07 Score=85.57 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=86.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC--cchhhh----cCC--ceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDELI----NMG--ITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~--~~~~l~----~~~--i~~~~~D~---~-----------~ 139 (268)
..+++||||+ |.||++++++|.++ |++|++..|+.+ ..+.+. ..+ +..+.+|. + .
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3468999997 99999999999999 999998876532 222221 122 33444553 1 2
Q ss_pred cCCCCEEEEccCCCCC-C---C-----hHHHH-------HHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS-L---D-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~---~-----~~~~~-------~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...+|++||+|+.... . + +.+.+ ..++ .. .....++|++||...|....
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~----------- 194 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP----------- 194 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC-----------
Confidence 4578999999985321 0 1 11111 1111 11 11226899999987764321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...|.+.+.+ + ..+++|+.++++-
T Consensus 195 ~~--~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 195 HL--LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 11 47999999888766543 2 5889999999873
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.1e-07 Score=82.00 Aligned_cols=135 Identities=10% Similarity=0.049 Sum_probs=83.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchhh----hc--CCceeeccCc---c-----------ccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----IN--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~l----~~--~~i~~~~~D~---~-----------~~~~ 142 (268)
+.+||+|+ |.||++++++|+++ |++|+++.| +++..+++ .. ..+..+.+|. + ....
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899996 99999999999999 999999888 33322221 11 1344455553 1 2356
Q ss_pred CCEEEEccCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++..... ++.+.+ +.++ .++.+.+++|++||...+... ...
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~-----------~~~ 147 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ-----------FGQ 147 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCc
Confidence 89999999854211 011110 1111 134567899999986432111 011
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+++.+ + .+.++|+.+.++.
T Consensus 148 --~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 148 --TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred --chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 46888888776655443 2 5888999998764
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=83.24 Aligned_cols=131 Identities=10% Similarity=0.011 Sum_probs=85.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
..+++||+|+ |.||++++++|+++ |++|++++|++++... ..+..+.+|. + ....+|+||
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3468999997 99999999999999 9999999997655321 2344444553 1 235789999
Q ss_pred EccCCCCC---------------C--ChHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 148 FCAPPSRS---------------L--DYPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 148 ~~a~~~~~---------------~--~~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
|+|+.... . ++.+.+ ..+. ..+.+..++|++||...+....
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 153 (266)
T PRK06171 83 NNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE--------- 153 (266)
T ss_pred ECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC---------
Confidence 99985311 0 011111 1111 1223446899999976543210
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
.. ..|+.+|...|.+.+.+ + ..+++||.+.
T Consensus 154 --~~--~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 154 --GQ--SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred --CC--chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 11 57999999888776654 2 5888999874
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.4e-08 Score=83.56 Aligned_cols=137 Identities=15% Similarity=0.073 Sum_probs=86.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + ....
T Consensus 9 ~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 9 GKRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 999999999876544332 11 234445553 1 2358
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|++||+++...... +.+.+ +.++ ..+.+ ..++|++||..-+-.. .|
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~ 155 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN-----------VP 155 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC-----------CC
Confidence 999999998643211 11111 0111 11222 3579999886421100 01
Q ss_pred CCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
.....|+.+|...|.+.+.+. ...++||.+-.+
T Consensus 156 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~ 197 (253)
T PRK05867 156 QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTE 197 (253)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCc
Confidence 111469999998888776542 578899988655
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=82.75 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=82.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchh----hhcC--CceeeccCc---c-----------ccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~----l~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
+.+||+|+ |+||.+++++|+++ |++|+...++ ++.... +... .+..+.+|. + ....
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 46899997 99999999999999 9998877643 322222 2222 233444553 1 1247
Q ss_pred CCEEEEccCCCCCC----C-----hHHHH-------HHHH---H---Hhc--C-CCeEEEEccCe-eecCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL----D-----YPGDV-------RLAA---L---SWN--G-EGSFLFTSSSA-IYDCSDNGACDEDS 196 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~----~-----~~~~~-------~~~~---~---~~~--g-vkr~V~~SS~~-vYg~~~~~~~~E~~ 196 (268)
.|+|||+++..... + +.+.+ .+++ . .+. + ..++|++||.. +|+...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 152 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------- 152 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence 89999999864311 0 11111 1111 1 111 1 24699999975 444210
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...|.+++.+ + ++++||+.++++.
T Consensus 153 ---~~--~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 153 ---EY--IDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred ---Cc--cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 01 35899999998876543 2 6899999999984
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=8.3e-08 Score=83.45 Aligned_cols=135 Identities=17% Similarity=0.149 Sum_probs=83.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchhhhc---CCceeeccCc---c-----------ccCC-C
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELIN---MGITPSLKWT---E-----------ATQK-F 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~l~~---~~i~~~~~D~---~-----------~~~~-~ 143 (268)
.+++||||+ |+||++++++|.++ |++|+...++ .++.+.+.. ..+..+.+|. + .... +
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 368999997 99999999999999 9999887653 333222221 2344455553 1 1223 9
Q ss_pred CEEEEccCCCC---------CCC-----hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSR---------SLD-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 144 D~Vi~~a~~~~---------~~~-----~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
|+|||+|+... ..+ +.+. ...++ ....+..++|++||...+.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------- 151 (253)
T PRK08642 83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----------- 151 (253)
T ss_pred eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------
Confidence 99999997421 000 1111 11111 1234557999999854321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
+..+. +.|+.+|.+.|.+++.+. ...++||.+-.+
T Consensus 152 ~~~~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 152 PVVPY--HDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred CCCCc--cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 12233 579999999998887652 477889888654
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2e-07 Score=80.58 Aligned_cols=135 Identities=11% Similarity=0.046 Sum_probs=84.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |.||++++++|.++ |++|+.+.|+.+. .+ .+... .+..+.+|. + ...
T Consensus 5 ~~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 5 NKVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 9999888775432 11 12222 244445553 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
++|+|||+++...... +.+.+ .+++ . ......++|++||...+... .+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~- 150 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL-----------PGY- 150 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-----------CCC-
Confidence 7999999998643211 11111 1111 1 11223589999986543211 112
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+++.. + .++++|+.+-.+
T Consensus 151 -~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 189 (245)
T PRK12937 151 -GPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATE 189 (245)
T ss_pred -chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCc
Confidence 57999999998877654 2 578899887544
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.4e-08 Score=95.61 Aligned_cols=137 Identities=15% Similarity=0.076 Sum_probs=91.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~ 140 (268)
+..++++|+|+ |.||++++++|+++ |++|++++|+++..+++. .. .+..+.+|. + ..
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 446 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH 446 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 34568999997 99999999999999 999999999876544321 11 244455554 1 13
Q ss_pred CCCCEEEEccCCCCCC----------ChHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL----------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~----------~~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
..+|+|||+|+..... ++.+.+ +.++ .++.+..++|++||.+.|....
T Consensus 447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 517 (657)
T PRK07201 447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP--------- 517 (657)
T ss_pred CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---------
Confidence 4799999999853211 111111 1111 1345668999999988775321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+ + +++++||.+..+
T Consensus 518 --~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~ 558 (657)
T PRK07201 518 --RF--SAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTP 558 (657)
T ss_pred --Cc--chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence 11 57999999988877543 2 688999998765
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1e-07 Score=84.31 Aligned_cols=135 Identities=15% Similarity=0.076 Sum_probs=82.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC---ceeeccCc---c-----------ccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG---ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~---i~~~~~D~---~-----------~~~~ 142 (268)
++++|+|+ |.||++++++|.++ |++|++++|++++.+.+ ...+ +..+.+|. + ....
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47899997 99999999999999 99999999986553332 2111 12233443 1 2356
Q ss_pred CCEEEEccCCCCCC---C-----hHHHH-------HHHH------H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL---D-----YPGDV-------RLAA------L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+++..... + +...+ ..+. . +.....++|++||...+... |
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~------------~ 146 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL------------P 146 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC------------C
Confidence 89999999854221 1 11111 1111 0 11234689999996532211 1
Q ss_pred CCCCHHHHHHHHHHHHHHH-------cC--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILE-------FG--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~-------~~--~tIlRp~~vyG~~ 234 (268)
. ...|+.+|...+.+... .+ +++++||.+.++.
T Consensus 147 ~-~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 147 W-HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred C-CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 1 14688888765544432 22 6899999998763
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.5e-07 Score=81.03 Aligned_cols=135 Identities=13% Similarity=0.045 Sum_probs=79.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc----chh----hhcC--CceeeccCc---c-----------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDE----LINM--GITPSLKWT---E----------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~----~~~----l~~~--~i~~~~~D~---~----------- 138 (268)
.+++||+|+ |.||++++++|+++ |++|+.+++..+. .+. +... .+..+.+|. +
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 468999997 99999999999999 9998777654321 111 1111 344455554 1
Q ss_pred ccCCCCEEEEccCCCCCC---C-----hHHHH-------HHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
....+|+|||+|+..... + +.+.+ ..++ .. .....++++++|....... +
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~---------~-- 154 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT---------P-- 154 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC---------C--
Confidence 135799999999863211 1 11111 0111 11 1123467766433221110 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
.. ..|+.+|.+.|.+.+.+. +++++||.+..+
T Consensus 155 ~~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~ 195 (257)
T PRK12744 155 FY--SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTP 195 (257)
T ss_pred Cc--ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccc
Confidence 11 578999999998876652 588999998765
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.1e-08 Score=85.51 Aligned_cols=135 Identities=13% Similarity=0.010 Sum_probs=82.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchhhhc---CCceeeccCc---c----c-------cC--C
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELIN---MGITPSLKWT---E----A-------TQ--K 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~l~~---~~i~~~~~D~---~----~-------~~--~ 142 (268)
|+++||+|+ |.||+.++++|.++ |++|++++|++ +....+.. .+++.+.+|. + . .. +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 578999996 99999999999999 99999999976 33332221 2345555554 1 1 11 1
Q ss_pred C--CEEEEccCCCCC----CC-----hHHH-----------HHHHH--HHh-cCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 143 F--PYVIFCAPPSRS----LD-----YPGD-----------VRLAA--LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 143 ~--D~Vi~~a~~~~~----~~-----~~~~-----------~~~~~--~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
. +++||+++.... .+ +.+. ++.++ ..+ .+.+++|++||...+. +
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----------~ 147 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKN-----------P 147 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcC-----------C
Confidence 2 278888875321 01 1111 11111 122 2456899999965432 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc---------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vyG~ 233 (268)
..+. ..|+.+|...|.+.+.+ + +..++||.+-.+
T Consensus 148 ~~~~--~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 148 YFGW--SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred CCCc--HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 1223 57999999988877533 2 466788877543
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.6e-07 Score=82.56 Aligned_cols=135 Identities=10% Similarity=0.019 Sum_probs=85.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC----CceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM----GITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~----~i~~~~~D~---~-----------~~ 140 (268)
.+.+||+|+ |.||++++++|+++ |++|++++|++++.+.. ... .+..+.+|. + ..
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 468999997 99999999999999 99999999987654332 111 233344443 1 23
Q ss_pred CCCCEEEEccCCCCCC--------ChHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL--------DYPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--------~~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+..... ++.+.+ +.++ .++.+..++|++||...+...
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 153 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE------------ 153 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC------------
Confidence 5789999999854221 121111 1111 123456799999997654321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + ...++||.+..+
T Consensus 154 ~~-~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 154 PH-MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred CC-chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccc
Confidence 11 146777887666554432 2 578899988654
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.4e-08 Score=85.70 Aligned_cols=166 Identities=13% Similarity=0.031 Sum_probs=106.5
Q ss_pred eEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc-------cccCCCCEEEEccCCCCC
Q 024417 86 DLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 86 kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~ 155 (268)
++++.| -||.|+++++...+. +++|-.+.|+..+. .+.. -.+.+..+|. +.+.++..|+-|++....
T Consensus 54 ~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~-~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn 130 (283)
T KOG4288|consen 54 WTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQ-TLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGN 130 (283)
T ss_pred HHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcc-hhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccc
Confidence 566666 599999999999999 99999999986532 1211 1234444432 356677888888876544
Q ss_pred CChHHHH-----HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---ceEE
Q 024417 156 LDYPGDV-----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---GCVL 225 (268)
Q Consensus 156 ~~~~~~~-----~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~---~tIl 225 (268)
..+.+.+ .+.+ +++.|+++|+|+|... ||-. +..| ..|-..|+++|..+.... .+||
T Consensus 131 ~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~---------~~i~---rGY~~gKR~AE~Ell~~~~~rgiil 197 (283)
T KOG4288|consen 131 IILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP---------PLIP---RGYIEGKREAEAELLKKFRFRGIIL 197 (283)
T ss_pred hHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC---------Cccc---hhhhccchHHHHHHHHhcCCCceee
Confidence 3222221 1222 3578999999999532 2211 2223 467788999999887653 7999
Q ss_pred EeCceecCCCc-----HH------HHHHHcCC------ccCCCCcccCcccHhhHhhcc
Q 024417 226 RLAGLYKADRG-----AH------VYWLQKGT------VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 226 Rp~~vyG~~~~-----~~------~~~l~~g~------~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|||.+||...- ++ .+++.++. +...+.-..+.+.++|+|.+.
T Consensus 198 RPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aa 256 (283)
T KOG4288|consen 198 RPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAA 256 (283)
T ss_pred ccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHH
Confidence 99999998321 11 11222221 233567778889999998753
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.2e-07 Score=83.45 Aligned_cols=134 Identities=14% Similarity=0.105 Sum_probs=84.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCc-chh----hhcC---CceeeccCc---c--------c--cC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADH-HDE----LINM---GITPSLKWT---E--------A--TQ 141 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~-~~~----l~~~---~i~~~~~D~---~--------~--~~ 141 (268)
++|||+|+ |.||++++++|+++ | ++|++++|++++ .+. +... .++.+.+|. + . ..
T Consensus 9 ~~vlItGas~giG~~la~~l~~~--gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKN--APARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhc--CCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 57999997 99999999999998 6 899999998765 332 2221 344555553 1 1 14
Q ss_pred CCCEEEEccCCCCCC-----ChH---HHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL-----DYP---GDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~~~---~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+.|++||+++..... +.. +.+ +.++ +.+.+..++|++||...+... + +
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~---------~--~ 155 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVR---------R--S 155 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCC---------C--C
Confidence 799999998764321 110 001 1111 234567899999997532210 1 1
Q ss_pred CCCCHHHHHHHHHHHHHH-------HcC--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVIL-------EFG--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~-------~~~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...+.+.+ ..+ +++++||.+..+
T Consensus 156 ~--~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 156 N--FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred C--cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 1 468888877654322 223 789999999764
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.8e-07 Score=82.57 Aligned_cols=133 Identities=7% Similarity=-0.023 Sum_probs=85.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||+|+ |.||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ....
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 99999999986554322 111 233444553 1 1356
Q ss_pred CCEEEEccCCCCCC-----C---hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL-----D---YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+++..... + +.+ +..++. .++. ..++|++||...+... ...
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~-----------~~~ 154 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPM-----------PMQ 154 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCC-----------CCc
Confidence 89999999742211 0 111 111111 0112 3699999997543211 112
Q ss_pred CCCHHHHHHHHHHHHHHHcC---------ceEEEeCceec
Q 024417 202 GRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYK 232 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG 232 (268)
..|+.+|...|.+++... .+.++|+.+.+
T Consensus 155 --~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 155 --AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred --cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 579999999988877542 48889998875
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-07 Score=82.89 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=86.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c---CCceeeccCc---c----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT---E----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~---~~i~~~~~D~---~----------~~~~ 142 (268)
.+++||||+ |.||+.++++|+++ |++|++++|+.++.+.+. . ..+..+.+|. + ....
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 8 GKLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 467999997 99999999999999 999999999865543321 1 1344555553 1 1246
Q ss_pred CCEEEEccCCCCCC--------ChHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL--------DYPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|++||+++..... +|.+. ++.++ .++.+..++|++||...+... |.
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~------------~~ 153 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI------------PN 153 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC------------Cc
Confidence 99999999853221 12111 11111 134456799999998754211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|+.+|...+.+.+.. + +..+.||.+..+
T Consensus 154 -~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 154 -IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred -chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 146888888777665543 2 578899988644
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-07 Score=82.13 Aligned_cols=135 Identities=16% Similarity=0.054 Sum_probs=87.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||+|+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ....+|+
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 468999997 99999999999999 9999999998766554432 1244455553 1 2357999
Q ss_pred EEEccCCCCC----CC-hHH----HHH---------------HHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRS----LD-YPG----DVR---------------LAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 146 Vi~~a~~~~~----~~-~~~----~~~---------------~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+||+|+.... .+ -.+ ..+ .++. .+....++|++||...|.... .
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~ 152 (263)
T PRK06200 84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG-----------G 152 (263)
T ss_pred EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------C
Confidence 9999985321 01 000 111 1110 111235899999987654211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
. ..|+.+|...|.+.+.+. +..+.||.+.-+
T Consensus 153 ~--~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 153 G--PLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred C--chhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 1 479999999888776542 467788888644
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.5e-07 Score=81.00 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=85.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcCC--ceeeccCc---c-----------ccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG--ITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~~--i~~~~~D~---~-----------~~~~~ 143 (268)
..+.+||+|+ |.||++++++|.++ |++|+++++.... .+.+...+ +..+.+|. + ....+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3468999997 99999999999999 9999988775321 12232222 33444553 1 23579
Q ss_pred CEEEEccCCCCCC---C-----hHHHHH-----------HHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~~-----------~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|++||+|+..... + +.+.+. .+. ..+.+ ..++|++||...|.... ..
T Consensus 87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 155 (253)
T PRK08993 87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI-----------RV 155 (253)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC-----------CC
Confidence 9999999864311 1 111110 111 11222 35899999987664321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|.+.|.+.+.. + ...++||.+--+
T Consensus 156 --~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~ 194 (253)
T PRK08993 156 --PSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATN 194 (253)
T ss_pred --cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCc
Confidence 36889998888766543 2 578899998654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.2e-07 Score=81.42 Aligned_cols=130 Identities=15% Similarity=0.072 Sum_probs=85.3
Q ss_pred EEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----cCCceeeccCc---c-------ccCCCCEEEEccC
Q 024417 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMGITPSLKWT---E-------ATQKFPYVIFCAP 151 (268)
Q Consensus 88 LI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----~~~i~~~~~D~---~-------~~~~~D~Vi~~a~ 151 (268)
||+|+ |+||+.++++|+++ |++|++++|++++.+.+. ..+++.+.+|. + ....+|.+||+++
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 58886 99999999999999 999999999865543322 12455556664 1 2346899999998
Q ss_pred CCCCCC----hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 024417 152 PSRSLD----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (268)
Q Consensus 152 ~~~~~~----~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE 214 (268)
...... -.+... .+. ....+.+++|++||.+.|... .+. +.|+.+|...|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~-----------~~~--~~Y~~sK~a~~ 145 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPS-----------ASG--VLQGAINAALE 145 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCC-----------Ccc--hHHHHHHHHHH
Confidence 533211 011111 111 122346799999998776531 122 57999999998
Q ss_pred HHHHHcC-------ceEEEeCceec
Q 024417 215 KVILEFG-------GCVLRLAGLYK 232 (268)
Q Consensus 215 ~~l~~~~-------~tIlRp~~vyG 232 (268)
.+.+... .+.++|+.+-.
T Consensus 146 ~~~~~la~e~~~irv~~i~pg~~~t 170 (230)
T PRK07041 146 ALARGLALELAPVRVNTVSPGLVDT 170 (230)
T ss_pred HHHHHHHHHhhCceEEEEeeccccc
Confidence 8877653 46777877644
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-07 Score=81.68 Aligned_cols=134 Identities=10% Similarity=0.105 Sum_probs=85.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC-CceeeccCc---c-----------ccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-GITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~-~i~~~~~D~---~-----------~~~~~D 144 (268)
|++||||+ |.||+.++++|.++ |++|++++|++++.+.+ ... .+..+.+|. + .....|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999997 99999999999999 99999999986554332 111 344455553 1 235799
Q ss_pred EEEEccCCCCC-----CC-----hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-----LD-----YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 145 ~Vi~~a~~~~~-----~~-----~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|||+|+.... .+ +.+.+ +.++ .++.+..++|++||...+... .+
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 147 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM-----------PP 147 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC-----------CC
Confidence 99999985321 11 11111 1111 112345689999998654211 11
Q ss_pred CCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
. ..|+.+|...+.+.+... ...+.||.+-.+
T Consensus 148 ~--~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 148 L--VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCc
Confidence 2 578889988887766542 456778877554
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.8e-07 Score=80.11 Aligned_cols=137 Identities=13% Similarity=0.075 Sum_probs=83.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcCC--ceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~~--i~~~~~D~---~-----------~ 139 (268)
+..+++||+|+ |.||++++++|.++ |+.|++..|+... .. .+...+ +..+.+|. + .
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~ 82 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE 82 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999988885432 21 122222 33344453 1 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...+|++||+++...... +.+.+ +.++ ..+.+ ..++|++||...+. +
T Consensus 83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~ 151 (261)
T PRK08936 83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------P 151 (261)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------C
Confidence 347899999998643211 11111 1111 12223 36899999854321 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..+. ..|+.+|.+.+.+.+.. + ++.++|+.+..+
T Consensus 152 ~~~~--~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~ 194 (261)
T PRK08936 152 WPLF--VHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_pred CCCC--cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCC
Confidence 1122 57888987666554432 2 689999998766
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.6e-07 Score=81.00 Aligned_cols=135 Identities=13% Similarity=0.074 Sum_probs=85.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcCC--ceeeccCc---c-----------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG--ITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~~--i~~~~~D~---~-----------~~~~~D 144 (268)
.+++||||+ |.||+.++++|+++ |++|++++|+... ...+...+ +..+.+|. + .....|
T Consensus 8 ~k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 8 GKVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999997 99999999999999 9999998886422 11222222 34445554 1 235799
Q ss_pred EEEEccCCCCCCC--------hHHH-----------HHHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~-----------~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
++||+|+...... +.+. .+.++ ..+.+ ..++|++||...|.... ..
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~~- 153 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI-----------RV- 153 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC-----------CC-
Confidence 9999998543211 1111 11111 12222 36899999987654211 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...+.+.+.. + ...++||.+-.+
T Consensus 154 -~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 154 -PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred -cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 46889998888766533 2 588899988644
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.71 E-value=4e-07 Score=80.04 Aligned_cols=134 Identities=19% Similarity=0.112 Sum_probs=85.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC---CceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~---~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.++++|+|+ |.||++++++|+++ |++|++++|+.++.+.+... .+..+.+|. + ....+|+
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 99999999987665554332 234444443 1 2357899
Q ss_pred EEEccCCCCC-------C------ChHHHH-------HHHH---H---HhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRS-------L------DYPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 146 Vi~~a~~~~~-------~------~~~~~~-------~~~~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
+||+|+.... . ++.+.+ ..++ . .+.+ .++|++||...+... .
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~-----------~ 150 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPN-----------G 150 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCC-----------C
Confidence 9999974210 0 011110 1111 1 1222 578888876543211 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+. +..+.||.+..+
T Consensus 151 ~~--~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 151 GG--PLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred CC--chhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 11 479999999998776542 467789888654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.7e-07 Score=80.86 Aligned_cols=136 Identities=14% Similarity=0.062 Sum_probs=89.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CC--ceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG--ITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~--i~~~~~D~---~-----------~ 139 (268)
++++++||||+ +-||..++++|.++ |++|+.+.|+.++..++.+ .+ ++.+..|+ + .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 45679999998 99999999999999 9999999999887765532 22 33445564 1 1
Q ss_pred cCCCCEEEEccCCCCCCC-----h--HHHHHH--H---------H---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD-----Y--PGDVRL--A---------A---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~-----~--~~~~~~--~---------~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...+|++|++||....+. + .+.+.+ + + ..+.+-.++|.++|.+-|-+.
T Consensus 82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~----------- 150 (265)
T COG0300 82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT----------- 150 (265)
T ss_pred CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC-----------
Confidence 237999999999765432 1 111111 1 1 134567799999998755421
Q ss_pred CCCCCCHHHHHHHHH----HHH---HHHcC--ceEEEeCceec
Q 024417 199 VPIGRSPRTDVLLKA----EKV---ILEFG--GCVLRLAGLYK 232 (268)
Q Consensus 199 ~p~~~~~y~~sK~~a----E~~---l~~~~--~tIlRp~~vyG 232 (268)
|. ...|+.+|... |-+ ++..+ ++.+-||.+.-
T Consensus 151 -p~-~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T 191 (265)
T COG0300 151 -PY-MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRT 191 (265)
T ss_pred -cc-hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccc
Confidence 22 15788888532 222 23334 68888887764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=3.3e-07 Score=80.08 Aligned_cols=134 Identities=12% Similarity=0.121 Sum_probs=83.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c-----------ccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~-----------~~~~~ 143 (268)
+++||+|+ |.||++++++|+++ |++|++++|+.++.+.+. . ..+..+.+|. + .....
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 57999997 99999999999999 999999999866544332 1 1344455553 1 23578
Q ss_pred CEEEEccCCCCC---CC-----hHHHHH-------HHH---H---HhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRS---LD-----YPGDVR-------LAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~---~~-----~~~~~~-------~~~---~---~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+++.... .+ +.+.+. ++. . ...+ ..++|++||..-+... . ..
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------~-~~ 148 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG----------P-GV 148 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC----------C-CC
Confidence 999999974321 11 111111 111 1 1222 3689999987432211 0 11
Q ss_pred CCCHHHHHHHHHHHHHHH----c----C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILE----F----G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~----~----~--~tIlRp~~vyG~ 233 (268)
..|+.+|...+.+.+. + + ...++||.+...
T Consensus 149 --~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 149 --IHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred --cchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 4688888887766553 2 3 588999999853
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=6.2e-07 Score=78.76 Aligned_cols=136 Identities=10% Similarity=0.015 Sum_probs=86.0
Q ss_pred CCeEEEEcc-c-HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc----CCceeeccCc---c-----------c
Q 024417 84 ENDLLIVGP-G-VLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWT---E-----------A 139 (268)
Q Consensus 84 m~kVLI~Ga-G-~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~----~~i~~~~~D~---~-----------~ 139 (268)
.+++||||+ | -||+.++++|+++ |++|++++|+.++.+.. .. ..+..+.+|. + .
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 478999996 7 5999999999999 99999999986654332 11 1244455554 1 1
Q ss_pred cCCCCEEEEccCCCCCC---C-----hHHHHH-------HH----H--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL---D-----YPGDVR-------LA----A--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---~-----~~~~~~-------~~----~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...+|+|||+++..... + +.+.+. .+ + ....+ ..++|++||...+..
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~----------- 163 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA----------- 163 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-----------
Confidence 35789999999853211 1 111110 11 1 12222 468888887543211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..+. ..|+.+|...|.+.+.+ + ...++|+.++.+.
T Consensus 164 ~~~~--~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 164 QHGQ--AHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF 207 (262)
T ss_pred CCCC--cchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence 0122 57999999888776643 2 5889999998763
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=7.1e-07 Score=79.23 Aligned_cols=133 Identities=17% Similarity=0.086 Sum_probs=81.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-----------hhhcC--CceeeccCc---c--------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINM--GITPSLKWT---E-------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-----------~l~~~--~i~~~~~D~---~-------- 138 (268)
++++||+|+ |+||++++++|.++ |++|++++|+.+... .+... .+..+.+|. +
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 6 GKTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 468999997 99999999999999 999999999754311 11111 233444553 1
Q ss_pred ---ccCCCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 ---ATQKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
....+|+|||+|+..... + +.+.+ .+++ ..+.+-.++|++||..... .
T Consensus 84 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---~----- 155 (273)
T PRK08278 84 AVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---P----- 155 (273)
T ss_pred HHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---c-----
Confidence 124799999999863221 1 11111 1111 1223345888888743111 0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCc
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAG 229 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~ 229 (268)
....+. ..|+.+|.+.|.+++.+. .+.+.|+.
T Consensus 156 -~~~~~~--~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 156 -KWFAPH--TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred -cccCCc--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 001122 689999999998877542 46778874
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.3e-07 Score=81.69 Aligned_cols=136 Identities=12% Similarity=0.077 Sum_probs=87.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-C--C--ceeeccCc---c-----------ccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G--ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~--~--i~~~~~D~---~-----------~~~~ 142 (268)
..+++||||+ |.||+.++++|.++ |++|++++|+.++.+.+.. . + +..+.+|. + ....
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3568999997 99999999999999 9999999998765543321 1 2 22222443 1 2357
Q ss_pred CCEEEEccCCCCCCC--------hHHHHH-------HHH---H--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDVR-------LAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-------~~~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
+|+|||+|+...... +.+.+. .++ . ......++|++||...+.... ..
T Consensus 86 id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~- 153 (296)
T PRK05872 86 IDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------GM- 153 (296)
T ss_pred CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------Cc-
Confidence 999999998643211 111111 111 0 012236899999976554211 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.. + ..++.|+.+..+
T Consensus 154 -~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 154 -AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccch
Confidence 57999999888777643 2 577899888654
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.63 E-value=8e-07 Score=80.73 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=49.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~ 141 (268)
.++++|||+ +.||.+++++|+++ | ++|+++.|+.++.+++. .. .+..+.+|. + ...
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 457899997 99999999999999 9 99999999866543321 11 233444554 1 135
Q ss_pred CCCEEEEccCC
Q 024417 142 KFPYVIFCAPP 152 (268)
Q Consensus 142 ~~D~Vi~~a~~ 152 (268)
..|++||+|+.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.61 E-value=9.3e-07 Score=85.40 Aligned_cols=136 Identities=12% Similarity=0.026 Sum_probs=88.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-C--CceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--GITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~--~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||+.++++|.++ |++|++++|+.++.+.+.. . .+..+.+|. + .....|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578999997 99999999999999 9999999998765544432 1 222334443 1 235799
Q ss_pred EEEEccCCCCC-C---C-----hHHHH-------HHHH----HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-L---D-----YPGDV-------RLAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 145 ~Vi~~a~~~~~-~---~-----~~~~~-------~~~~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
++||+|+.... . + +.+.+ ..+. ....+..++|++||...+... ... .
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 412 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL-----------PPR--N 412 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-----------CCC--c
Confidence 99999986421 1 1 11111 1111 112334689999997654321 112 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+.+.. + ...+.||.+..+
T Consensus 413 ~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 450 (520)
T PRK06484 413 AYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETP 450 (520)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCc
Confidence 7999999988776653 2 578899998765
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.7e-07 Score=76.44 Aligned_cols=130 Identities=16% Similarity=0.167 Sum_probs=82.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c----c----cCCCCEEEEccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E----A----TQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~----~----~~~~D~Vi~~a~ 151 (268)
||++|+|+ |.||++++++|.++ |++|+.++|+.++.+.+.. .+++.+.+|. + . .+.+|++||+++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 37999997 99999999999999 9999999998766544322 2455555664 1 1 236899999987
Q ss_pred CCC----C-----CChHHHHHHHH---------------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 152 PSR----S-----LDYPGDVRLAA---------------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 152 ~~~----~-----~~~~~~~~~~~---------------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+.. . .+..+.+++.+ .......++|++||.. . + .. ..|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~---------~--~~--~~Y~ 141 (223)
T PRK05884 79 PSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----P---------P--AG--SAEA 141 (223)
T ss_pred ccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----C---------C--Cc--cccH
Confidence 421 0 00011111110 0111236899999854 0 0 11 4688
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+|...+.+.+.. + ...+.||.+..+
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence 9998887766543 2 578889887543
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.6e-06 Score=77.07 Aligned_cols=67 Identities=13% Similarity=0.205 Sum_probs=47.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c----------ccCCCCE
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E----------ATQKFPY 145 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~----------~~~~~D~ 145 (268)
+.++|||+|.||++++++|. + |++|++++|++++.+.+ ...+ +..+.+|. + ....+|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 45788999999999999995 7 99999999986554332 2222 34444553 1 1247999
Q ss_pred EEEccCCCC
Q 024417 146 VIFCAPPSR 154 (268)
Q Consensus 146 Vi~~a~~~~ 154 (268)
|||+|+...
T Consensus 80 li~nAG~~~ 88 (275)
T PRK06940 80 LVHTAGVSP 88 (275)
T ss_pred EEECCCcCC
Confidence 999998643
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.9e-07 Score=80.52 Aligned_cols=137 Identities=12% Similarity=0.028 Sum_probs=85.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC----CceeeccCc-----c-------ccC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWT-----E-------ATQ- 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~----~i~~~~~D~-----~-------~~~- 141 (268)
.+.++|||+ |.||++++++|.++ |++|++++|++++.+++. .. .+..+..|. + .+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 368999997 99999999999999 999999999877654331 11 122222332 1 223
Q ss_pred -CCCEEEEccCCCCC-----CC-hHHHHH-----------H----HH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 142 -KFPYVIFCAPPSRS-----LD-YPGDVR-----------L----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 142 -~~D~Vi~~a~~~~~-----~~-~~~~~~-----------~----~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
++|++||+|+.... .+ -.+.++ . ++ ..+.+..++|++||...+...
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~---------- 200 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP---------- 200 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------
Confidence 45699999985321 11 011111 1 11 123466799999997654210
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|. ...|+.+|...+.+.+.. + .+.+.||.+-.+
T Consensus 201 ~~p~-~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 201 SDPL-YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred CCcc-chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 0121 268999999887765543 2 578899988654
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.55 E-value=9.5e-07 Score=76.33 Aligned_cols=183 Identities=16% Similarity=0.113 Sum_probs=109.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchhhhcCCc--eeeccCcc------ccCCCCEEEEcc
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINMGI--TPSLKWTE------ATQKFPYVIFCA 150 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~l~~~~i--~~~~~D~~------~~~~~D~Vi~~a 150 (268)
..+.++|||||+ |.+|..++..|+.++ |.+ |+.-+--. ..+.....|- -..+.|.. .-...|.+||..
T Consensus 41 ~~~~PrvLITG~LGQLG~~~A~LLR~~y-Gs~~VILSDI~K-Pp~~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfS 118 (366)
T KOG2774|consen 41 TQKAPRVLITGSLGQLGRGLASLLRYMY-GSECVILSDIVK-PPANVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFS 118 (366)
T ss_pred cCCCCeEEEecchHHHhHHHHHHHHHHh-CCccEehhhccC-CchhhcccCCchhhhhhccccHHHhhcccccceeeeHH
Confidence 344579999997 999999999999886 554 44433221 1111111221 11112321 235788999976
Q ss_pred CCC------CCC----ChHHHHHHHHH-HhcCCCeEEEEccCeeecCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024417 151 PPS------RSL----DYPGDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNG-ACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 151 ~~~------~~~----~~~~~~~~~~~-~~~gvkr~V~~SS~~vYg~~~~~-~~~E~~~~~p~~~~~y~~sK~~aE~~l~ 218 (268)
+-. ... -..+++.|++. ++.-.-++..-||++.||+.... +...-+...|. +-||.+|..+|.+=.
T Consensus 119 ALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQRPR--TIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 119 ALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQRPR--TIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeecCc--eeechhHHHHHHHHH
Confidence 421 110 14567777762 22334577788999999975432 22222223343 789999998885543
Q ss_pred Hc----C--ceEEEeCceecC---CCcH-------HHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 219 EF----G--GCVLRLAGLYKA---DRGA-------HVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 219 ~~----~--~tIlRp~~vyG~---~~~~-------~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+ + .-.+|.+.+... |.+. +...+++|+- .-.+|....+.|.+|+-+++
T Consensus 197 y~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~ 263 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASV 263 (366)
T ss_pred HHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHH
Confidence 33 3 578888887754 2221 1123567764 56789999999999987654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.7e-06 Score=76.02 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=81.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchh----hhc---CCceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LIN---MGITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~----l~~---~~i~~~~~D~---~-----------~ 139 (268)
..+++||||+ +.||++++++|+++ |++|+.+.|. .+..+. +.. ..+..+.+|. + .
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 3478999997 99999999999999 9999887653 333222 211 1234445553 1 1
Q ss_pred cCCCCEEEEccCCCC------CCCh----HHHHH---------------HHH--HHhcCCCeEEEEccCeeecCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSR------SLDY----PGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~------~~~~----~~~~~---------------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (268)
...+|++||+|+... ...+ .+.+. .++ ..+.+..++|++||..-+-..
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 159 (260)
T PRK08416 85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYI----- 159 (260)
T ss_pred cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCC-----
Confidence 357899999997421 0100 11111 111 122345689999986422100
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
+ .. ..|+.+|...|.+.+.+ + ...+.||.+--
T Consensus 160 ----~--~~--~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T 200 (260)
T PRK08416 160 ----E--NY--AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDT 200 (260)
T ss_pred ----C--Cc--ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccC
Confidence 0 11 46888999888777653 2 57888987743
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.50 E-value=2e-06 Score=74.82 Aligned_cols=130 Identities=13% Similarity=0.069 Sum_probs=83.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-C---ceeeccCc--------------cccCCCCE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G---ITPSLKWT--------------EATQKFPY 145 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~---i~~~~~D~--------------~~~~~~D~ 145 (268)
|.++|||+ .-||...+++|.++ |++|+...|+.++++++... + +.+...|. +...++|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 56899998 99999999999999 99999999999888776432 2 33333332 13568999
Q ss_pred EEEccCCCCCCC--------h-------HHHHHH----HH--HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------Y-------PGDVRL----AA--LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~-------~~~~~~----~~--~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+||.||....++ | ..++.+ ++ ..+.+-.++|.+||++ .|.- |. .
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y-------------~~-~ 150 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY-------------PG-G 150 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC-------------CC-C
Confidence 999999644321 1 111111 11 1334445999999976 1111 11 1
Q ss_pred CHHHHHHHHHHHHHHH----cC-----ceEEEeCce
Q 024417 204 SPRTDVLLKAEKVILE----FG-----GCVLRLAGL 230 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~----~~-----~tIlRp~~v 230 (268)
+.|+.+|+..-..-.. .. ++.+-||.+
T Consensus 151 ~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v 186 (246)
T COG4221 151 AVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLV 186 (246)
T ss_pred ccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCcee
Confidence 5688888766554432 22 456666665
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=3.7e-06 Score=73.70 Aligned_cols=135 Identities=15% Similarity=0.093 Sum_probs=84.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc---CCceeeccCc---c-------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN---MGITPSLKWT---E-------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~---~~i~~~~~D~---~-------~~~~~D~ 145 (268)
.++++|+|+ |.||++++++|.++ |++|++++|++++.+.+ .. ..+..+.+|. + ....+|+
T Consensus 7 ~k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 84 (259)
T PRK06125 7 GKRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDI 84 (259)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 99999999987654432 21 1234444553 1 3467999
Q ss_pred EEEccCCCCCC---C-----hHHHHH-------HH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL---D-----YPGDVR-------LA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~~~-------~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
+||+++..... + +.+.+. .+ + ..+.+..++|++||..-.. +.... .
T Consensus 85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~--~ 151 (259)
T PRK06125 85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDADY--I 151 (259)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCCc--h
Confidence 99999853211 1 111110 11 1 1233346899998753211 11112 4
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...+.+.+.. + +..++||.+..+
T Consensus 152 ~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 152 CGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATD 189 (259)
T ss_pred HhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccH
Confidence 6788888877666543 2 578899888654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.47 E-value=3.7e-06 Score=72.56 Aligned_cols=132 Identities=10% Similarity=0.029 Sum_probs=81.1
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchh----hhcC--CceeeccCc---c-----------ccCCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE----LINM--GITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~----l~~~--~i~~~~~D~---~-----------~~~~~D 144 (268)
|||+|+ |+||.+++++|.++ |++|++++|..+ +.+. +... .+..+..|. + .....|
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 589996 99999999999999 999999887532 2222 2222 244555553 1 234689
Q ss_pred EEEEccCCCCCC--------ChHH-------HHHHHH-------HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL--------DYPG-------DVRLAA-------LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 145 ~Vi~~a~~~~~~--------~~~~-------~~~~~~-------~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~ 201 (268)
++||+++..... ++.+ +...++ .+..+..++|++||.. .|+.. ..
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~ 146 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNR------------GQ 146 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCC------------CC
Confidence 999999853211 1111 111111 0223457899999964 44421 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.. + .+.++|+.+..+.
T Consensus 147 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 147 --VNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred --cchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 46888888776555433 2 5788999987664
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.7e-06 Score=73.17 Aligned_cols=70 Identities=14% Similarity=0.136 Sum_probs=49.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCc-------cccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~ 152 (268)
+..++++|||+ |.||++++++|+++ |++|++++|+... ...........+.+|. +.+..+|++||+|+.
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 34578999997 99999999999999 9999999997522 2111111112333443 246789999999986
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 90 ~ 90 (245)
T PRK12367 90 N 90 (245)
T ss_pred C
Confidence 3
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=8e-06 Score=71.64 Aligned_cols=136 Identities=14% Similarity=0.119 Sum_probs=82.4
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCC-----------Ccc----hhhhcCC--ceeeccCc---c-
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTA-----------DHH----DELINMG--ITPSLKWT---E- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~-----------~~~----~~l~~~~--i~~~~~D~---~- 138 (268)
..+++||||+ | .||++++++|+++ |++|++..|.. +.. +++...+ +..+.+|. +
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3578999997 4 7999999999999 99998875421 000 1122223 33444553 1
Q ss_pred ----------ccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCC
Q 024417 139 ----------ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCS 187 (268)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~ 187 (268)
.....|+|||+|+...... +.+.+ +.++ .++.+..++|++||...+.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-- 160 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG-- 160 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC--
Confidence 2346899999998532211 11111 0111 1233456999999975432
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 188 ~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+..+. ..|+.+|...+.+.+.. + .+.++||.+-.+
T Consensus 161 ---------~~~~~--~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~ 204 (256)
T PRK12859 161 ---------PMVGE--LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTG 204 (256)
T ss_pred ---------CCCCc--hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCC
Confidence 11122 57999999888776543 2 578899988654
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=9.2e-06 Score=77.31 Aligned_cols=134 Identities=13% Similarity=0.064 Sum_probs=82.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhh-cCCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI-NMGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~-~~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||..++++|.++ |++|++++|.... ...+. ..+...+.+|. + ....+|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 3468999997 99999999999999 9999999885322 22221 22334444443 1 123689
Q ss_pred EEEEccCCCCCCC--------hHHHH-------HHHH---H---HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~~~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+++...... +...+ .++. . ......+||++||...+.... ..
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-----------~~-- 353 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-----------GQ-- 353 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-----------CC--
Confidence 9999998643211 11111 1111 0 112336899999975432110 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
..|+.+|...+.+++.+ + ...+.||.+-
T Consensus 354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 354 TNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIE 390 (450)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCc
Confidence 57999998776665543 2 5778888764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=5.5e-06 Score=80.04 Aligned_cols=135 Identities=15% Similarity=0.149 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CC--ceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG--ITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~--i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||||+ +.||..++++|.++ |++|++++|+.++.+.+.. .+ +..+.+|. + ....+|+
T Consensus 5 ~k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 5 SRVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CeEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 9999999998776544322 22 33344553 1 2357999
Q ss_pred EEEccCCCC---C--CC-----hHHHH-----------HHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSR---S--LD-----YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 146 Vi~~a~~~~---~--~~-----~~~~~-----------~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+||+|+... . .+ +.+.+ +.++ ..+.+. .++|++||....... |
T Consensus 83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~------------~- 149 (520)
T PRK06484 83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL------------P- 149 (520)
T ss_pred EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC------------C-
Confidence 999998521 0 11 11111 1111 122333 489999987543211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+...|+.+|...+.+.+.. + .+.++|+.+..+
T Consensus 150 ~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 150 KRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCch
Confidence 1157999999888766543 2 578899987544
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.1e-05 Score=65.24 Aligned_cols=130 Identities=15% Similarity=0.023 Sum_probs=78.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch-------hhhcCC--ceeeccCc---c-----------c
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD-------ELINMG--ITPSLKWT---E-----------A 139 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~-------~l~~~~--i~~~~~D~---~-----------~ 139 (268)
++++|+|+ |.||.+++++|.++ |. .|+.+.|+++... .+...+ +..+..|. + .
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899996 99999999999998 86 6888888754432 122222 33344553 1 1
Q ss_pred cCCCCEEEEccCCCCCC--------ChH-------HHHHHHH--HHhcCCCeEEEEccCee-ecCCCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL--------DYP-------GDVRLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--------~~~-------~~~~~~~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~~~p~ 201 (268)
...+|.|||+++..... ++. .+...++ ....+.+++|++||... |+.. ..
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~------------~~ 146 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP------------GQ 146 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC------------Cc
Confidence 24579999999853211 011 1111221 12345688999998643 3311 11
Q ss_pred CCCHHHHHHHHHHHHHHHcC-----ceEEEeCce
Q 024417 202 GRSPRTDVLLKAEKVILEFG-----GCVLRLAGL 230 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~~-----~tIlRp~~v 230 (268)
..|+.+|...|.+++... .+.+.|+.+
T Consensus 147 --~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 147 --ANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred --hhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 468889988888875432 566666654
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.3e-05 Score=69.56 Aligned_cols=133 Identities=10% Similarity=0.006 Sum_probs=83.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cCC--ceeeccCc---c-----------ccC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--ITPSLKWT---E-----------ATQ- 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~~--i~~~~~D~---~-----------~~~- 141 (268)
.++++|+|+ +-||+.++++|.++ |++|+++.|+.++.+.+. ..+ +..+.+|. + .+.
T Consensus 5 ~k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 5 SSIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CeEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 89999999999999 999999999876654332 222 33333442 1 234
Q ss_pred CCCEEEEccCCCCC----CC-----hHHHHH----H-------HH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS----LD-----YPGDVR----L-------AA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~----~~-----~~~~~~----~-------~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..|++||+++.... .+ +.+.+. . ++ ..+.+ ...+|++||...+ +
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------~- 149 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------Q- 149 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------------C-
Confidence 79999999973211 11 221111 0 11 12222 4689999984321 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...+.+.+.. + ...+.||.+-.+.
T Consensus 150 -~~--~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 150 -DL--TGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred -Cc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 11 46888898877665443 2 5788999887653
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.35 E-value=1e-05 Score=76.21 Aligned_cols=70 Identities=16% Similarity=0.211 Sum_probs=51.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh-hc--CCceeeccCc-------cccCCCCEEEEcc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-IN--MGITPSLKWT-------EATQKFPYVIFCA 150 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l-~~--~~i~~~~~D~-------~~~~~~D~Vi~~a 150 (268)
+++++|+|||+ |.||++++++|.++ |++|++++|++++.... .. .++..+.+|. +.+.++|++||+|
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 34678999997 99999999999999 99999999976554321 11 1233344443 2467899999999
Q ss_pred CCC
Q 024417 151 PPS 153 (268)
Q Consensus 151 ~~~ 153 (268)
+..
T Consensus 254 Gi~ 256 (406)
T PRK07424 254 GIN 256 (406)
T ss_pred CcC
Confidence 864
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.34 E-value=5.5e-06 Score=70.73 Aligned_cols=120 Identities=18% Similarity=0.178 Sum_probs=82.0
Q ss_pred CCeEEEEcc--cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc---c------------ccCCCCE
Q 024417 84 ENDLLIVGP--GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E------------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga--G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~---~------------~~~~~D~ 145 (268)
.++|||+|| |-||..|++++.++ |++|++..|..+....|. +.|+.+...|. + ...+.|+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 368999996 99999999999999 999999999988888776 56777766553 1 2357899
Q ss_pred EEEccCCCCCCC----hHHHHHHHH--------------H--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 146 VIFCAPPSRSLD----YPGDVRLAA--------------L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 146 Vi~~a~~~~~~~----~~~~~~~~~--------------~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
+++.|+...... -..++.+.. . .-.....+|+++|..+|-+- |.+ +.
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf------------pf~-~i 151 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF------------PFG-SI 151 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc------------chh-hh
Confidence 999998654321 112222111 0 01123589999999887632 221 56
Q ss_pred HHHHHHHHHHHHH
Q 024417 206 RTDVLLKAEKVIL 218 (268)
Q Consensus 206 y~~sK~~aE~~l~ 218 (268)
|..+|++.-.+-+
T Consensus 152 YsAsKAAihay~~ 164 (289)
T KOG1209|consen 152 YSASKAAIHAYAR 164 (289)
T ss_pred hhHHHHHHHHhhh
Confidence 8888876555544
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.1e-05 Score=69.39 Aligned_cols=137 Identities=12% Similarity=0.113 Sum_probs=80.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-------ccCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-------ATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-------~~~~~D~Vi~~a~~~ 153 (268)
|+|+|+|+ |.||++++++|.++.+++.|....|+.... .....+..+.+|. + .+.+.|+|||+++..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 48999996 999999999999983346676666654321 2223445555554 1 356899999999864
Q ss_pred CCC-----------C---hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 154 RSL-----------D---YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 154 ~~~-----------~---~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
... + +.+.+. .++ .++.+..+++++||.. +.. .+. +..+. ..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~--~~~-----~~~-~~~~~--~~Y 148 (235)
T PRK09009 79 HTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKV--GSI-----SDN-RLGGW--YSY 148 (235)
T ss_pred cccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecc--ccc-----ccC-CCCCc--chh
Confidence 210 0 111110 111 1223446888888632 211 111 11122 478
Q ss_pred HHHHHHHHHHHHHc---------C--ceEEEeCceecC
Q 024417 207 TDVLLKAEKVILEF---------G--GCVLRLAGLYKA 233 (268)
Q Consensus 207 ~~sK~~aE~~l~~~---------~--~tIlRp~~vyG~ 233 (268)
+.+|...+.+.+.. + ...+.||.+..+
T Consensus 149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~ 186 (235)
T PRK09009 149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTA 186 (235)
T ss_pred hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecC
Confidence 88998888766543 1 456788887655
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.4e-06 Score=75.31 Aligned_cols=107 Identities=12% Similarity=0.106 Sum_probs=70.1
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--hhhcC--Cceee-ccC----ccccCCCCEEEE
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM--GITPS-LKW----TEATQKFPYVIF 148 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--~l~~~--~i~~~-~~D----~~~~~~~D~Vi~ 148 (268)
|....|+||+|+|+ |.||+.++..|..+.-..++..+|+...+.. .+... ..... ..| .+.++++|+||+
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence 34556889999998 9999999999986511468999998322211 11111 12222 122 468999999999
Q ss_pred ccCCCCCC--C-------hHHHHHHHH--HHhcCCCeEEEEccCeeec
Q 024417 149 CAPPSRSL--D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYD 185 (268)
Q Consensus 149 ~a~~~~~~--~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg 185 (268)
+++..... . ..+.+++++ .++.+++++|+++|-.+..
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv 130 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNS 130 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence 99975432 1 122344444 3567999999999977644
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.6e-05 Score=69.74 Aligned_cols=136 Identities=10% Similarity=0.023 Sum_probs=82.9
Q ss_pred CCCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---cCCceeeccCc---c-----------ccCC
Q 024417 83 GENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 83 ~m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~~~i~~~~~D~---~-----------~~~~ 142 (268)
..++++|||+ +-||+.++++|+++ |++|++..|+.+..+.+. ...+..+.+|. + ....
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 3468999996 48999999999999 999999988732222221 12344455554 1 2357
Q ss_pred CCEEEEccCCCCC----C---C-----hHHHH-----------HHHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS----L---D-----YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~~~-----------~~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.|++||+|+.... . + |...+ +.++.......++|++||...... .
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~------------~ 151 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA------------I 151 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc------------C
Confidence 9999999985321 1 1 11111 011101112368999998543211 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + ...+.||.+-.+
T Consensus 152 ~~-~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 152 PN-YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred Cc-chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 11 157999999888776543 2 578899988654
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.31 E-value=8.9e-07 Score=82.42 Aligned_cols=69 Identities=20% Similarity=0.319 Sum_probs=57.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcC---CceeeccCc-------cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM---GITPSLKWT-------EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~---~i~~~~~D~-------~~~~~~D~Vi~~a~~ 152 (268)
||+|||+|+|.||+.++..|.++ + .+|++.+|+.++..++... +++....|. +++.+.|+||+|+++
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~--~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQN--GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECCchhHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 78999999999999999999998 7 8999999998877666443 466666553 367889999999987
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 79 ~~ 80 (389)
T COG1748 79 FV 80 (389)
T ss_pred hh
Confidence 53
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.28 E-value=9.4e-06 Score=73.44 Aligned_cols=63 Identities=13% Similarity=0.056 Sum_probs=45.3
Q ss_pred EEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccCCCCE
Q 024417 88 LIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 88 LI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~~~D~ 145 (268)
||||+ +.||.+++++|+++ | ++|++..|+.++...+. .. .+..+.+|. + .....|+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 58887 99999999999999 9 99999999865543221 11 233444553 1 1247899
Q ss_pred EEEccCC
Q 024417 146 VIFCAPP 152 (268)
Q Consensus 146 Vi~~a~~ 152 (268)
+||+|+.
T Consensus 79 lInnAG~ 85 (308)
T PLN00015 79 LVCNAAV 85 (308)
T ss_pred EEECCCc
Confidence 9999985
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.2e-05 Score=70.95 Aligned_cols=70 Identities=13% Similarity=0.112 Sum_probs=49.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchh----hhcCC--ceeeccCc---c----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE----LINMG--ITPSLKWT---E----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~----l~~~~--i~~~~~D~---~----------~~ 140 (268)
+..+++||||+ |.||++++++|+++ |++|++.++... ..+. +...+ +..+.+|. + ..
T Consensus 10 l~~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 10 LSGKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 34578999997 99999999999999 999999887532 2222 22222 33444553 1 13
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
..+|+|||+|+..
T Consensus 88 g~iD~li~nAG~~ 100 (306)
T PRK07792 88 GGLDIVVNNAGIT 100 (306)
T ss_pred CCCCEEEECCCCC
Confidence 5799999999864
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=71.12 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=45.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchhh----hc-C--CceeeccCc---c--------------
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----IN-M--GITPSLKWT---E-------------- 138 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~l----~~-~--~i~~~~~D~---~-------------- 138 (268)
+.++|||+ |.||++++++|.++ |++|+++.|. +++.+.+ .. . ....+.+|. +
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 47899997 99999999999999 9999988764 3333222 11 1 122333443 1
Q ss_pred -ccCCCCEEEEccCC
Q 024417 139 -ATQKFPYVIFCAPP 152 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~ 152 (268)
...++|+|||+|+.
T Consensus 80 ~~~g~iD~lv~nAG~ 94 (267)
T TIGR02685 80 RAFGRCDVLVNNASA 94 (267)
T ss_pred HccCCceEEEECCcc
Confidence 12479999999985
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=2e-05 Score=68.77 Aligned_cols=133 Identities=10% Similarity=-0.042 Sum_probs=81.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC---ceeeccCc---c-----------ccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG---ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~---i~~~~~D~---~-----------~~~~ 142 (268)
|.++|+|+ +-||..++++|. + |++|+.++|++++.+++ +..+ +..+.+|. + ....
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 46899997 999999999997 7 89999999987665433 2222 44455553 1 2357
Q ss_pred CCEEEEccCCCCCC---C-----hHHHH-HH----------HH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL---D-----YPGDV-RL----------AA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-~~----------~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.|++||+++..... + +.+.. .+ ++ ..+.+ ..++|++||..-+-.. + .
T Consensus 78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------~--~ 146 (246)
T PRK05599 78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR---------R--A 146 (246)
T ss_pred CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---------c--C
Confidence 99999999864211 1 11110 01 00 12222 3689999986532111 0 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...+.+.+.. + ...+.||.+..+
T Consensus 147 ~--~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 147 N--YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred C--cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 1 46888998776655433 2 466788887643
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.9e-05 Score=63.46 Aligned_cols=123 Identities=18% Similarity=0.156 Sum_probs=73.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+++|+|+ |.||++++++|.++ ++|++++|+++.. .....|. +.+.++|+|||+++.....
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~~~--------~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 69 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSGDV--------QVDITDPASIRALFEKVGKVDAVVSAAGKVHFA 69 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCCce--------EecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 37999997 99999999999876 7899999875421 1111221 1345899999999853221
Q ss_pred C--------hHHHH-------HHHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024417 157 D--------YPGDV-------RLAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (268)
Q Consensus 157 ~--------~~~~~-------~~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l 217 (268)
. +.+.+ .++. . ......+++++||..-.. +.... ..|+.+|...+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~~--~~Y~~sK~a~~~~~ 136 (199)
T PRK07578 70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PIPGG--ASAATVNGALEGFV 136 (199)
T ss_pred chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CCCCc--hHHHHHHHHHHHHH
Confidence 1 21111 1111 0 112336799998754321 11111 57888898777655
Q ss_pred HHc------C--ceEEEeCcee
Q 024417 218 LEF------G--GCVLRLAGLY 231 (268)
Q Consensus 218 ~~~------~--~tIlRp~~vy 231 (268)
+.. + ...+.||.+-
T Consensus 137 ~~la~e~~~gi~v~~i~Pg~v~ 158 (199)
T PRK07578 137 KAAALELPRGIRINVVSPTVLT 158 (199)
T ss_pred HHHHHHccCCeEEEEEcCCccc
Confidence 432 2 4677888764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.5e-05 Score=66.14 Aligned_cols=135 Identities=10% Similarity=-0.030 Sum_probs=81.4
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhc----CCceeeccCc---c-----------c
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN----MGITPSLKWT---E-----------A 139 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~----~~i~~~~~D~---~-----------~ 139 (268)
.+.++|||+ +-||+.++++|.++ |++|+...|+.. ..+++.. ..+..+.+|. + .
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 367999996 59999999999999 999999877532 2222221 1244455554 1 2
Q ss_pred cCCCCEEEEccCCCCC----C---C-----hHHHHH-----------HHHHHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS----L---D-----YPGDVR-----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~---~-----~~~~~~-----------~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
....|++||+|+.... . + +...+. .++.......++|++||....-
T Consensus 85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~----------- 153 (257)
T PRK08594 85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER----------- 153 (257)
T ss_pred CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------
Confidence 4679999999975321 1 1 111110 0110111235899999864311
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. |. ...|+.+|...+.+.+.. + ...+.||.+..+
T Consensus 154 ~~-~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 154 VV-QN-YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred CC-CC-CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 11 11 157999999888776543 2 577889887653
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.8e-06 Score=72.49 Aligned_cols=171 Identities=20% Similarity=0.161 Sum_probs=107.8
Q ss_pred eEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhhcC-----C--ceeeccCc-c--------ccCCC
Q 024417 86 DLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELINM-----G--ITPSLKWT-E--------ATQKF 143 (268)
Q Consensus 86 kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~~~-----~--i~~~~~D~-~--------~~~~~ 143 (268)
--|||| +|.=|+.|++.|+.+ |++|.++.|.... .++|... + .....+|. + ..-++
T Consensus 30 vALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred EEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 457899 599999999999999 9999999886443 2333211 1 22233454 1 24578
Q ss_pred CEEEEccCCCCCC------Ch------HHHHHHHHH-Hh---cCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 144 PYVIFCAPPSRSL------DY------PGDVRLAAL-SW---NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 144 D~Vi~~a~~~~~~------~~------~~~~~~~~~-~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+-|+|+|+..+.. +| +..++.+-+ +. ...-||-..||...||.....|-.|.+|.-|. ++|+
T Consensus 108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPR--SPYa 185 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPR--SPYA 185 (376)
T ss_pred hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCC--ChhH
Confidence 8889998865431 12 222222211 11 22358999999999997666788999998887 8998
Q ss_pred HHHHHHHHHHHHcCceEEEe----------CceecC---CC--cHHHH-------HHHcCCc----cCCCCcccCcccHh
Q 024417 208 DVLLKAEKVILEFGGCVLRL----------AGLYKA---DR--GAHVY-------WLQKGTV----DSRPDHILNLIHYE 261 (268)
Q Consensus 208 ~sK~~aE~~l~~~~~tIlRp----------~~vyG~---~~--~~~~~-------~l~~g~~----~~~g~~~~~~Ihv~ 261 (268)
.+|..+- |+++.. |.+|.. .+ ++..+ ++..|+. .++-+..++|=|..
T Consensus 186 ~aKmy~~-------WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~ 258 (376)
T KOG1372|consen 186 AAKMYGY-------WIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAG 258 (376)
T ss_pred Hhhhhhe-------EEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhH
Confidence 8875331 333332 333322 11 22222 2333432 56778899999999
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|-++|+
T Consensus 259 dYVEAM 264 (376)
T KOG1372|consen 259 DYVEAM 264 (376)
T ss_pred HHHHHH
Confidence 998886
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=8.3e-05 Score=65.36 Aligned_cols=136 Identities=14% Similarity=0.049 Sum_probs=80.5
Q ss_pred CCCeEEEEccc---HHHHHHHHHHHhcCCCCeEEEEeCCCCcc---hhhhc--CCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELIN--MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~GaG---~IG~~L~~~L~~~~~G~~V~~~~R~~~~~---~~l~~--~~i~~~~~D~---~-----------~~ 140 (268)
..+.+||||++ -||+.++++|+++ |++|++.+|+.+.. +++.. .....+.+|. + ..
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc
Confidence 34689999963 8999999999999 99999999875432 22211 1123344553 1 23
Q ss_pred CCCCEEEEccCCCCC----C---C-----hHHHHH-----------HHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS----L---D-----YPGDVR-----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~---~-----~~~~~~-----------~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...|++||+|+.... . + +.+.+. .++.....-.++|++||..... +
T Consensus 87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----------~ 155 (258)
T PRK07533 87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----------V 155 (258)
T ss_pred CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----------C
Confidence 579999999985321 0 1 111111 1110111225799998754211 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...+.+.+.. + ...+.||.+-.+
T Consensus 156 -~~~-~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~ 198 (258)
T PRK07533 156 -VEN-YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR 198 (258)
T ss_pred -Ccc-chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence 011 157889998877665543 2 578889887543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.7e-05 Score=69.08 Aligned_cols=126 Identities=12% Similarity=-0.026 Sum_probs=74.3
Q ss_pred HHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----c----cCCCCEEEEccCCCCCCChHHH------
Q 024417 99 VAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A----TQKFPYVIFCAPPSRSLDYPGD------ 161 (268)
Q Consensus 99 L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~----~~~~D~Vi~~a~~~~~~~~~~~------ 161 (268)
++++|+++ |++|++++|+.++... .+.+.+|. + . ..++|+|||+|+.....++.+.
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~~~-----~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~ 73 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGMTL-----DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFL 73 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchhhh-----hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchH
Confidence 47889999 9999999998765321 12233443 1 1 2469999999986533322211
Q ss_pred -HHHHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCC----------------CCCCCCCCCHHHHHHHHHHHHHHH-
Q 024417 162 -VRLAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDED----------------SPVVPIGRSPRTDVLLKAEKVILE- 219 (268)
Q Consensus 162 -~~~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~----------------~~~~p~~~~~y~~sK~~aE~~l~~- 219 (268)
...+. . ......++|++||...|+.....+..|. .+.... ..|+.+|...|.+.+.
T Consensus 74 ~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~l 151 (241)
T PRK12428 74 GLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA--TGYQLSKEALILWTMRQ 151 (241)
T ss_pred HHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcc--cHHHHHHHHHHHHHHHH
Confidence 11111 1 1112369999999988863211111110 122122 6899999988765432
Q ss_pred ----c---C--ceEEEeCceecC
Q 024417 220 ----F---G--GCVLRLAGLYKA 233 (268)
Q Consensus 220 ----~---~--~tIlRp~~vyG~ 233 (268)
+ + ...++||.+.++
T Consensus 152 a~~e~~~~girvn~v~PG~v~T~ 174 (241)
T PRK12428 152 AQPWFGARGIRVNCVAPGPVFTP 174 (241)
T ss_pred HHHhhhccCeEEEEeecCCccCc
Confidence 2 2 588999999876
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=5.6e-05 Score=67.62 Aligned_cols=130 Identities=18% Similarity=0.188 Sum_probs=78.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC---------Ccchh----hhcCC--ceeeccCc---c------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---------DHHDE----LINMG--ITPSLKWT---E------ 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~---------~~~~~----l~~~~--i~~~~~D~---~------ 138 (268)
.+++||||+ +.||+.++++|+++ |++|++++|+. +..+. +...+ +..+.+|. +
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 468999997 99999999999999 99999988764 22222 22222 33344453 1
Q ss_pred -----ccCCCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhc---C---CCeEEEEccCeeecC
Q 024417 139 -----ATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWN---G---EGSFLFTSSSAIYDC 186 (268)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~---g---vkr~V~~SS~~vYg~ 186 (268)
....+|++||+|+..... + +.+.+ +.++ .... + ..++|++||..-+..
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 246799999999864311 1 11111 1111 0111 1 258999998653221
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeC
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLA 228 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~ 228 (268)
. + +...|+.+|.+.+.+.+.. + +..+.|+
T Consensus 164 ~------------~-~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg 201 (286)
T PRK07791 164 S------------V-GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA 201 (286)
T ss_pred C------------C-CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC
Confidence 1 1 1157999998887766543 2 4677787
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.15 E-value=3.8e-05 Score=67.58 Aligned_cols=135 Identities=11% Similarity=0.033 Sum_probs=81.0
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCCc------chhhhcC--CceeeccCc---c-----------
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADH------HDELINM--GITPSLKWT---E----------- 138 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~~------~~~l~~~--~i~~~~~D~---~----------- 138 (268)
.+.++|||+ +-||+.++++|.++ |++|+...|+.++ .+++... ....+.+|. +
T Consensus 6 ~k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 6 GKKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CcEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 467999996 48999999999999 9999887664331 2222222 133444553 1
Q ss_pred ccCCCCEEEEccCCCCC----CC--------hHHHH-----------HHHHHHhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRS----LD--------YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~----~~--------~~~~~-----------~~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
.....|++||+|+.... .. |.+.+ +.++.......++|++||..-..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~---------- 153 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVR---------- 153 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccccc----------
Confidence 23579999999985321 11 11111 11110111236899999864221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. |. ...|+.+|...+.+.+.. + ...+.||.+-.+
T Consensus 154 -~~-~~-~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 154 -AI-PN-YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred -CC-cc-cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 10 11 157999999888776643 2 578899988654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.9e-05 Score=67.60 Aligned_cols=138 Identities=14% Similarity=0.069 Sum_probs=82.1
Q ss_pred CCCCCCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhc-CC-ceeeccCc---c----------
Q 024417 80 GGVGENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-MG-ITPSLKWT---E---------- 138 (268)
Q Consensus 80 ~~~~m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~-~~-i~~~~~D~---~---------- 138 (268)
..+..+++||+|+ +-||+.++++|.++ |++|+...|+.. +.+++.. .+ ...+.+|. +
T Consensus 6 ~~~~~k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 83 (272)
T PRK08159 6 GLMAGKRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLE 83 (272)
T ss_pred ccccCCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHH
Confidence 3444578999996 58999999999999 999998877632 2222221 12 23345553 1
Q ss_pred -ccCCCCEEEEccCCCCC----C---C-----hHHHHH-HH------H---H-HhcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSRS----L---D-----YPGDVR-LA------A---L-SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~----~---~-----~~~~~~-~~------~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
.....|++||+|+.... . + +...+. |+ . . ......++|++||.+.+..
T Consensus 84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~-------- 155 (272)
T PRK08159 84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV-------- 155 (272)
T ss_pred HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC--------
Confidence 23579999999985321 0 1 211111 11 1 0 1122368999988543210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceec
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYK 232 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG 232 (268)
.|. ...|+.+|...+.+.+... ...+.||.+..
T Consensus 156 ----~p~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T 197 (272)
T PRK08159 156 ----MPH-YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKT 197 (272)
T ss_pred ----CCc-chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCC
Confidence 111 1468999988877665431 47788888754
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=8.9e-05 Score=67.21 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=80.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC----------cchh----hhcCC--ceeeccCc---c-----
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----------HHDE----LINMG--ITPSLKWT---E----- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~----------~~~~----l~~~~--i~~~~~D~---~----- 138 (268)
.+.+||||+ +.||+.++++|+++ |++|++++|+.. +.+. +...+ +..+.+|. +
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAA--GATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 468999997 89999999999999 999999999742 2221 22222 33445553 1
Q ss_pred ------ccCCCCEEEEcc-CCC---C-CC--------ChHHHHH-----------HHH--HHhcCCCeEEEEccCee-ec
Q 024417 139 ------ATQKFPYVIFCA-PPS---R-SL--------DYPGDVR-----------LAA--LSWNGEGSFLFTSSSAI-YD 185 (268)
Q Consensus 139 ------~~~~~D~Vi~~a-~~~---~-~~--------~~~~~~~-----------~~~--~~~~gvkr~V~~SS~~v-Yg 185 (268)
.....|++||+| +.. . .. ++.+.+. .++ +.+.+..++|++||... ++
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 235799999999 531 0 01 0111111 111 12233468999998542 22
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 186 ~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
.. +.... ..|+.+|...+.+.+.. + ...+.||.+-
T Consensus 166 ~~---------~~~~~--~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~ 209 (305)
T PRK08303 166 AT---------HYRLS--VFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLR 209 (305)
T ss_pred Cc---------CCCCc--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccc
Confidence 11 00111 46999998887766543 2 4667788774
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=6.8e-05 Score=66.62 Aligned_cols=135 Identities=14% Similarity=0.033 Sum_probs=81.0
Q ss_pred CCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCCcc---hhhh-cCC-ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELI-NMG-ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~~~---~~l~-~~~-i~~~~~D~---~-----------~~~ 141 (268)
.+.+||||+ + -||+.++++|+++ |++|+...|+.+.. +.+. ..+ ...+.+|. + ...
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 367999997 4 8999999999999 99999988864322 2221 112 22334553 1 246
Q ss_pred CCCEEEEccCCCCC----CC--------hHHHHH-H----------HHHHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS----LD--------YPGDVR-L----------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~----~~--------~~~~~~-~----------~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..|++||+|+.... .. |.+.+. | ++.......++|++||......
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~------------ 152 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV------------ 152 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc------------
Confidence 89999999985321 11 111111 1 1101112258999998643210
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 153 ~~~-~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 153 MPN-YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred CCc-cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 011 147889998877666543 2 578889988654
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.7e-05 Score=68.22 Aligned_cols=132 Identities=12% Similarity=0.002 Sum_probs=79.8
Q ss_pred eEEEEcc-cHHHHHHHHHHHh----cCCCCeEEEEeCCCCcchhh----hc----CCceeeccCc---c-------cc-C
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQ----EHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWT---E-------AT-Q 141 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~----~~~G~~V~~~~R~~~~~~~l----~~----~~i~~~~~D~---~-------~~-~ 141 (268)
.+||||+ +.||.+++++|.+ + |++|+++.|+.++.+.+ .. ..+..+.+|. + .+ +
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSP--GSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccC--CcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 4789997 9999999999987 6 99999999987654432 21 1244455554 1 11 1
Q ss_pred -------CCCEEEEccCCCCC-----CC--hHHHHH---------------HHH--HHhc-C-CCeEEEEccCeeecCCC
Q 024417 142 -------KFPYVIFCAPPSRS-----LD--YPGDVR---------------LAA--LSWN-G-EGSFLFTSSSAIYDCSD 188 (268)
Q Consensus 142 -------~~D~Vi~~a~~~~~-----~~--~~~~~~---------------~~~--~~~~-g-vkr~V~~SS~~vYg~~~ 188 (268)
+.|+|||+|+.... .+ ..+.+. .++ .+.. + ..++|++||...+...
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~- 158 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF- 158 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC-
Confidence 12689999985211 10 011111 111 1122 2 3589999997543211
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 189 ~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
... ..|+.+|...+.+.+.+ + ...+.||.+-.
T Consensus 159 ----------~~~--~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T 199 (256)
T TIGR01500 159 ----------KGW--ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDT 199 (256)
T ss_pred ----------CCc--hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccc
Confidence 112 57999999888776653 1 46778888754
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=8.4e-05 Score=65.51 Aligned_cols=135 Identities=10% Similarity=-0.042 Sum_probs=80.1
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhcC-C-ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-G-ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~~-~-i~~~~~D~---~-----------~~~ 141 (268)
.+.+||||+ +-||+.++++|.++ |++|+...|... ..+++... + ...+.+|. + ...
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 467999993 58999999999999 999998776532 12222211 2 23344553 1 245
Q ss_pred CCCEEEEccCCCCC--------CC-----hHHHHH-HH------H---H--HhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS--------LD-----YPGDVR-LA------A---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~-----~~~~~~-~~------~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
..|++||+|+.... ++ +...+. ++ . . -+.+..++|++||.+.+...
T Consensus 84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~--------- 154 (261)
T PRK08690 84 GLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI--------- 154 (261)
T ss_pred CCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC---------
Confidence 79999999986421 11 111110 10 0 0 01223579999986543210
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + ...+.||.+--+
T Consensus 155 ---~~-~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 155 ---PN-YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL 196 (261)
T ss_pred ---CC-cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence 11 146888998887665543 2 577889888543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0001 Score=66.00 Aligned_cols=120 Identities=18% Similarity=0.072 Sum_probs=78.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc---CC-ceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN---MG-ITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~---~~-i~~~~~D~---~-----------~~ 140 (268)
.+.|+|||| .-||.++|.+|.++ |..++.+.|..++.+.+ ++ .. +....+|. + .+
T Consensus 12 ~kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 12 GKVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 467999998 99999999999999 99888887766555443 22 12 44555664 1 46
Q ss_pred CCCCEEEEccCCCCCCC----hHHHHH---------------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD----YPGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~----~~~~~~---------------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+.|++||+||...... ..+.++ .++ +++.+-.|+|.+||+.=+-.-
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~------------ 157 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL------------ 157 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC------------
Confidence 79999999999755311 122222 122 234446799999997632210
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q 024417 200 PIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~ 218 (268)
|. ...|..+|.+.+.+..
T Consensus 158 P~-~~~Y~ASK~Al~~f~e 175 (282)
T KOG1205|consen 158 PF-RSIYSASKHALEGFFE 175 (282)
T ss_pred Cc-ccccchHHHHHHHHHH
Confidence 11 1368889988876554
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.03 E-value=4.3e-06 Score=68.95 Aligned_cols=68 Identities=19% Similarity=0.317 Sum_probs=54.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|++|-++|.|-.|+.+++.|++. |++|++.+|++++.+.+...+++...-..+..+++|+|+-|.+..
T Consensus 1 m~~Ig~IGlG~mG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~ 68 (163)
T PF03446_consen 1 MMKIGFIGLGNMGSAMARNLAKA--GYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDD 68 (163)
T ss_dssp -BEEEEE--SHHHHHHHHHHHHT--TTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSH
T ss_pred CCEEEEEchHHHHHHHHHHHHhc--CCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccc
Confidence 78999999999999999999999 999999999988888877777655533336788889999888763
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00014 Score=64.01 Aligned_cols=136 Identities=10% Similarity=0.064 Sum_probs=80.0
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhcC-Cc-eeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-GI-TPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~~-~i-~~~~~D~---~-----------~~ 140 (268)
..+.++|||+ + -||+.++++|.++ |++|+..+|+.. ..+++... +. ..+.+|. + ..
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 3467899997 4 6999999999999 999998888632 12223221 22 2234453 1 24
Q ss_pred CCCCEEEEccCCCCC-------CC-----hHHHHH-HH----------HHHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS-------LD-----YPGDVR-LA----------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~-------~~-----~~~~~~-~~----------~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...|++||+++.... .+ |.+.+. |+ +.....-.++|++||......
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~----------- 153 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV----------- 153 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-----------
Confidence 679999999975321 01 211111 11 001112258999998653210
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...+.+.+.. + ...+.||.+-.+
T Consensus 154 -~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 154 -IPN-YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred -CCc-ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 011 146889998887766543 2 577888887543
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00016 Score=64.47 Aligned_cols=135 Identities=14% Similarity=0.075 Sum_probs=80.3
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhc-CCc-eeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-MGI-TPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~-~~i-~~~~~D~---~-----------~~~ 141 (268)
.+.+||||+ +-||+.++++|.++ |++|+..+|+.+ ..+.+.. .+. ..+.+|. + ...
T Consensus 5 ~k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 5 GKKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CcEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 468999996 48999999999999 999999988742 2222211 121 2344553 1 246
Q ss_pred CCCEEEEccCCCCC-------CC-----hHHHH-----------HHHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS-------LD-----YPGDV-----------RLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-------~~-----~~~~~-----------~~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..|++||+|+.... .+ +.+.+ +.++.....-.++|++||.+-...
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~------------ 150 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY------------ 150 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC------------
Confidence 79999999985321 11 11111 111101112258999998542110
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...+.+.+.. + ...+.||.+..+
T Consensus 151 ~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 151 VPH-YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred CCc-chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 111 146889998877665543 2 467889888653
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00021 Score=62.79 Aligned_cols=68 Identities=10% Similarity=0.049 Sum_probs=48.0
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCC--Ccchhhhc---CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN---MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~--~~~~~l~~---~~i~~~~~D~---~-----------~~~ 141 (268)
.++++|||+ +-||..++++|.++ |++|++.+|+. +..+.+.. ..+..+.+|. + ...
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 468999995 79999999999999 99999998764 22233221 1234455553 1 235
Q ss_pred CCCEEEEccCCC
Q 024417 142 KFPYVIFCAPPS 153 (268)
Q Consensus 142 ~~D~Vi~~a~~~ 153 (268)
.+|++||+|+..
T Consensus 85 ~iD~li~nAG~~ 96 (256)
T PRK07889 85 GLDGVVHSIGFA 96 (256)
T ss_pred CCcEEEEccccc
Confidence 799999999853
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=4.4e-05 Score=72.27 Aligned_cols=69 Identities=13% Similarity=0.154 Sum_probs=51.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----------------cccCCCCEE
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----------------EATQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----------------~~~~~~D~V 146 (268)
+|++|.|+|.|++|..++..|.+. |++|+++++++++.+.+....+.....+. ...+++|+|
T Consensus 2 ~~~kI~VIGlG~~G~~~A~~La~~--G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvv 79 (415)
T PRK11064 2 SFETISVIGLGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAF 79 (415)
T ss_pred CccEEEEECcchhhHHHHHHHHhC--CCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEE
Confidence 467999999999999999999999 99999999998877665432221111111 123589999
Q ss_pred EEccCCC
Q 024417 147 IFCAPPS 153 (268)
Q Consensus 147 i~~a~~~ 153 (268)
|.|.+..
T Consensus 80 ii~vptp 86 (415)
T PRK11064 80 LIAVPTP 86 (415)
T ss_pred EEEcCCC
Confidence 9999864
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.93 E-value=6.6e-05 Score=60.96 Aligned_cols=120 Identities=21% Similarity=0.124 Sum_probs=75.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCC--CCcchh----hhcCC--ceeeccCc---c-----------cc
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMT--ADHHDE----LINMG--ITPSLKWT---E-----------AT 140 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~--~~~~~~----l~~~~--i~~~~~D~---~-----------~~ 140 (268)
|.++|+|+ +-||+.++++|+++ |. .|+.+.|+ .+..+. +...+ +.++.+|. + ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR--GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899997 99999999999999 65 77778887 232222 23233 44455553 1 34
Q ss_pred CCCCEEEEccCCCCCCC----hHHHHHHHH-------------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD----YPGDVRLAA-------------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~----~~~~~~~~~-------------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
...|++||+++...... -.+.+.+.+ ....+..++|++||..-.-+. | +.
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------------~-~~ 145 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS------------P-GM 145 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS------------T-TB
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC------------C-CC
Confidence 68999999999755321 112222111 012457899999986543211 1 11
Q ss_pred CHHHHHHHHHHHHHHH
Q 024417 204 SPRTDVLLKAEKVILE 219 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~ 219 (268)
..|+.+|...+.+.+.
T Consensus 146 ~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 146 SAYSASKAALRGLTQS 161 (167)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHH
Confidence 5799999988877654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00018 Score=65.64 Aligned_cols=146 Identities=13% Similarity=0.020 Sum_probs=89.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc----CCceeeccCcc--------------ccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MGITPSLKWTE--------------ATQ 141 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~----~~i~~~~~D~~--------------~~~ 141 (268)
+.++|||+ .-||...+++|..+ |.+|+...|+.++..+ +.. ..+....+|+. ...
T Consensus 36 ~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 57889997 99999999999999 9999999999754332 221 23444566651 356
Q ss_pred CCCEEEEccCCCCC-----CC---------hHH--HHHHHH---HHhcCCCeEEEEccCee-ecCCCCCCCCCCCC-CCC
Q 024417 142 KFPYVIFCAPPSRS-----LD---------YPG--DVRLAA---LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSP-VVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-----~~---------~~~--~~~~~~---~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~-~~p 200 (268)
..|++|++||.... .| |.. -+.+++ ++.....|+|++||..- ....-+..-.|... ...
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~ 193 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSS 193 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccc
Confidence 89999999985321 11 111 011121 23344489999999764 11111112222221 111
Q ss_pred CCCCHHHHHHHHHHHHHHHc------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|++......+. + ...+.||.+...+
T Consensus 194 ~--~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 194 D--AAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred h--hHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 1 25999998776544443 3 5788999887763
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00027 Score=62.50 Aligned_cols=134 Identities=11% Similarity=0.001 Sum_probs=79.2
Q ss_pred CCeEEEEccc---HHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~GaG---~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+.+||||++ -||+.++++|.++ |++|+..+|+.. ..+++... ....+.+|. + ...
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 4679999973 7999999999999 999998888631 12222221 223344553 1 235
Q ss_pred CCCEEEEccCCCCC--------CC-hHHHHH-----H---------HHHH-hcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS--------LD-YPGDVR-----L---------AALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~-~~~~~~-----~---------~~~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
..|++||+|+.... .+ -.+.+. | .+.. ...-.++|++||.+-+. +
T Consensus 84 ~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----------~ 152 (262)
T PRK07984 84 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------A 152 (262)
T ss_pred CCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------C
Confidence 68999999984321 00 011111 1 0101 11225799998865211 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceec
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYK 232 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG 232 (268)
.|. ...|+.+|...+.+.+... ...+-||.+.-
T Consensus 153 -~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (262)
T PRK07984 153 -IPN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRT 194 (262)
T ss_pred -CCC-cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccc
Confidence 111 1479999998887766442 46777887753
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00021 Score=63.04 Aligned_cols=134 Identities=14% Similarity=0.051 Sum_probs=79.1
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCC---CCcchhhhc-CC-ceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT---ADHHDELIN-MG-ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~---~~~~~~l~~-~~-i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ +-||..++++|+++ |++|+...|. .+..+.+.. .+ ...+.+|. + ...
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 467999993 68999999999999 9999987654 222222221 12 22334443 1 246
Q ss_pred CCCEEEEccCCCCC--------CC-hHHHHHHH---------------HHHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS--------LD-YPGDVRLA---------------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~-~~~~~~~~---------------~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
..|++||+|+.... .+ -.+.++.. +.......++|++||....- +
T Consensus 84 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~-----------~ 152 (260)
T PRK06997 84 GLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER-----------V 152 (260)
T ss_pred CCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccccc-----------C
Confidence 79999999985321 01 01111111 10112236899999865311 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
.|. ...|+.+|...+.+.+.. + ...+.||.+-.
T Consensus 153 -~~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T 194 (260)
T PRK06997 153 -VPN-YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKT 194 (260)
T ss_pred -CCC-cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCcccc
Confidence 011 157999998887766543 2 57788988754
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.90 E-value=6.8e-05 Score=65.22 Aligned_cols=94 Identities=15% Similarity=0.181 Sum_probs=66.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c-----ccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----ATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~-----~~~~~D~Vi~~a~~~~ 154 (268)
|+++|+|+|.+|+.+++.|.++ ||+|+++++++++..+... .....+.+|. + -+.++|+++-+.+.+.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~--g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEE--GHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhC--CCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 5899999999999999999999 9999999999888766333 5666666664 1 3679999997666542
Q ss_pred CCChHHHHHHHH-HHhcCCCeEEEEccCeee
Q 024417 155 SLDYPGDVRLAA-LSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 155 ~~~~~~~~~~~~-~~~~gvkr~V~~SS~~vY 184 (268)
.+-+.-.+ .+..|++++|--=....|
T Consensus 79 ----~N~i~~~la~~~~gv~~viar~~~~~~ 105 (225)
T COG0569 79 ----VNSVLALLALKEFGVPRVIARARNPEH 105 (225)
T ss_pred ----HHHHHHHHHHHhcCCCcEEEEecCHHH
Confidence 22222222 244688887766544434
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.3e-05 Score=68.29 Aligned_cols=68 Identities=19% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-----------hhcCCce------------eeccCc-cc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGIT------------PSLKWT-EA 139 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-----------l~~~~i~------------~~~~D~-~~ 139 (268)
|++|.|+|+|.+|..++..|.++ |++|++.+|+++..+. +...+.. ....|. ++
T Consensus 2 ~~~V~VIG~G~mG~~iA~~la~~--G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 2 MGSVAIIGAGLIGRAWAIVFARA--GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred CcEEEEECccHHHHHHHHHHHHC--CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 46899999999999999999999 9999999998754432 1122210 112344 36
Q ss_pred cCCCCEEEEccCCC
Q 024417 140 TQKFPYVIFCAPPS 153 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (268)
+.++|+|+.+.+..
T Consensus 80 ~~~ad~Vi~avpe~ 93 (308)
T PRK06129 80 VADADYVQESAPEN 93 (308)
T ss_pred hCCCCEEEECCcCC
Confidence 78999999987654
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.2e-05 Score=66.22 Aligned_cols=66 Identities=21% Similarity=0.335 Sum_probs=41.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-------------------cCc-cccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------------KWT-EATQKFP 144 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-------------------~D~-~~~~~~D 144 (268)
|||.|+|.||+|..++..|.+. ||+|++++.++++.+.+......... .|. ++..++|
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~--G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~ad 78 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEK--GHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDAD 78 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHT--TSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-S
T ss_pred CEEEEECCCcchHHHHHHHHhC--CCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccc
Confidence 6899999999999999999999 99999999988776665431111110 111 2477899
Q ss_pred EEEEccCC
Q 024417 145 YVIFCAPP 152 (268)
Q Consensus 145 ~Vi~~a~~ 152 (268)
++|.|.+.
T Consensus 79 v~~I~VpT 86 (185)
T PF03721_consen 79 VVFICVPT 86 (185)
T ss_dssp EEEE----
T ss_pred eEEEecCC
Confidence 99999974
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00021 Score=65.47 Aligned_cols=99 Identities=12% Similarity=0.081 Sum_probs=63.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--hhhcC--Cceee--ccC---ccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM--GITPS--LKW---TEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--~l~~~--~i~~~--~~D---~~~~~~~D~Vi~~a~~~~ 154 (268)
.||+|+|+ |.||..++..|....-..++..+++++.... .+... ..... ..+ .+.+.++|+|||+|+...
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~ 98 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR 98 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence 58999998 9999999999986611348999998762211 12111 11111 133 357999999999999644
Q ss_pred C-C-Ch-------HHHHHHHH--HHhcCCCeEEEEccCee
Q 024417 155 S-L-DY-------PGDVRLAA--LSWNGEGSFLFTSSSAI 183 (268)
Q Consensus 155 ~-~-~~-------~~~~~~~~--~~~~gvkr~V~~SS~~v 183 (268)
. + .. .+.++++. .++.+.+.+|+++|--+
T Consensus 99 ~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 99 KPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 3 1 11 22233333 25667889999988544
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.79 E-value=2.6e-05 Score=69.14 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=53.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC---CeEEEEeCCCCcchhhhcC-CceeeccCc-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G---~~V~~~~R~~~~~~~l~~~-~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
+|++|.|+|+|.+|..+++.|.+. | ++|.+.+|++++.+.+... ++... .+. +.+.++|+||.|..+..
T Consensus 1 ~mm~I~iIG~G~mG~~la~~l~~~--g~~~~~v~v~~r~~~~~~~~~~~~g~~~~-~~~~~~~~~advVil~v~~~~ 74 (267)
T PRK11880 1 MMKKIGFIGGGNMASAIIGGLLAS--GVPAKDIIVSDPSPEKRAALAEEYGVRAA-TDNQEAAQEADVVVLAVKPQV 74 (267)
T ss_pred CCCEEEEEechHHHHHHHHHHHhC--CCCcceEEEEcCCHHHHHHHHHhcCCeec-CChHHHHhcCCEEEEEcCHHH
Confidence 378999999999999999999998 7 7899999987766655443 55432 232 45789999999887653
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00098 Score=59.75 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=54.3
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC-ceeeccCc--------------c
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG-ITPSLKWT--------------E 138 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~-i~~~~~D~--------------~ 138 (268)
.+......|||||+ +-+|+.++.+++++ |..+...|.+.+...+ +.+.| +..+.+|. +
T Consensus 33 ~k~v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 33 LKSVSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred hhhccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHH
Confidence 34455678999998 79999999999999 9999999998765433 33233 44455553 1
Q ss_pred ccCCCCEEEEccCCC
Q 024417 139 ATQKFPYVIFCAPPS 153 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~ 153 (268)
...++|++|+.||..
T Consensus 111 e~G~V~ILVNNAGI~ 125 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIV 125 (300)
T ss_pred hcCCceEEEeccccc
Confidence 467999999999964
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=8.4e-05 Score=64.84 Aligned_cols=59 Identities=20% Similarity=0.267 Sum_probs=38.4
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhh-cCCceeecc--Cc-----ccc--CCCCEEEEccCCC
Q 024417 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI-NMGITPSLK--WT-----EAT--QKFPYVIFCAPPS 153 (268)
Q Consensus 93 G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~-~~~i~~~~~--D~-----~~~--~~~D~Vi~~a~~~ 153 (268)
||+|++|+++|+++ |++|+.+++.... ...+. ......+.. |. +.+ .++|+|||+|+..
T Consensus 29 GfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvs 98 (229)
T PRK09620 29 GTIGRIIAEELISK--GAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGS 98 (229)
T ss_pred CHHHHHHHHHHHHC--CCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHhcccCCCEEEECcccc
Confidence 99999999999999 9999988863221 11111 112222333 22 234 3789999999864
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.5e-05 Score=68.92 Aligned_cols=68 Identities=22% Similarity=0.336 Sum_probs=54.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|++|.|+|.|.+|..+++.|++. |++|++.+|++++.+.+...++.......+..+++|+||.|.+..
T Consensus 1 m~~Ig~IGlG~mG~~mA~~l~~~--G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~ 68 (296)
T PRK15461 1 MAAIAFIGLGQMGSPMASNLLKQ--GHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNG 68 (296)
T ss_pred CCeEEEEeeCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCH
Confidence 56899999999999999999999 999999999988877766555543322225678999999988764
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.8e-05 Score=68.49 Aligned_cols=67 Identities=15% Similarity=0.270 Sum_probs=53.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .+. +.++++|+||.|.+..
T Consensus 2 ~~~IgviG~G~mG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~g~~~~-~~~~e~~~~~d~vi~~vp~~ 69 (296)
T PRK11559 2 TMKVGFIGLGIMGKPMSKNLLKA--GYSLVVYDRNPEAVAEVIAAGAETA-STAKAVAEQCDVIITMLPNS 69 (296)
T ss_pred CceEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeec-CCHHHHHhcCCEEEEeCCCH
Confidence 56899999999999999999999 9999999998877666555555332 233 4678999999988753
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00019 Score=65.87 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=50.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee----------------ccCccccCCCCEE
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS----------------LKWTEATQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~----------------~~D~~~~~~~D~V 146 (268)
+||+|.|+|+|.+|..++..|.+. |++|++++|++. .+.+...+.... ..|.+...++|+|
T Consensus 1 ~~mkI~IiG~G~mG~~~A~~L~~~--G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 77 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAA--GADVTLIGRARI-GDELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLV 77 (341)
T ss_pred CCceEEEECCCHHHHHHHHHHHhc--CCcEEEEecHHH-HHHHHhcCceeecCCCcceecccceeEeccChhhccCCCEE
Confidence 467999999999999999999999 999999999642 233333343221 1233456789999
Q ss_pred EEccCCCC
Q 024417 147 IFCAPPSR 154 (268)
Q Consensus 147 i~~a~~~~ 154 (268)
|.+.....
T Consensus 78 il~vk~~~ 85 (341)
T PRK08229 78 LVTVKSAA 85 (341)
T ss_pred EEEecCcc
Confidence 99886543
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00018 Score=67.88 Aligned_cols=66 Identities=20% Similarity=0.369 Sum_probs=50.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-------------------C-ceeeccCc-cccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------------G-ITPSLKWT-EATQKF 143 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-------------------~-i~~~~~D~-~~~~~~ 143 (268)
|+|.|+|+|++|..++..|.+. ||+|++.++++++.+.+... + +. ...|. +++.++
T Consensus 1 mkI~vIGlG~~G~~lA~~La~~--G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~-~~~~~~~~~~~a 77 (411)
T TIGR03026 1 MKIAVIGLGYVGLPLAALLADL--GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLR-ATTDYEDAIRDA 77 (411)
T ss_pred CEEEEECCCchhHHHHHHHHhc--CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeE-EECCHHHHHhhC
Confidence 4799999999999999999999 99999999988766554321 1 11 11233 357899
Q ss_pred CEEEEccCCC
Q 024417 144 PYVIFCAPPS 153 (268)
Q Consensus 144 D~Vi~~a~~~ 153 (268)
|+||.|.+..
T Consensus 78 dvvii~vpt~ 87 (411)
T TIGR03026 78 DVIIICVPTP 87 (411)
T ss_pred CEEEEEeCCC
Confidence 9999998854
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.70 E-value=3.3e-05 Score=57.55 Aligned_cols=67 Identities=22% Similarity=0.359 Sum_probs=52.2
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCC---CeEEEE-eCCCCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQ-TMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G---~~V~~~-~R~~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
||.|+|+|.+|..|++.|++. | ++|... +|++++..++.. .++.....+. +.++++|+||.+..|..
T Consensus 1 kI~iIG~G~mg~al~~~l~~~--g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~ 73 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLAS--GIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQ 73 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHT--TS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGG
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHH
Confidence 688999999999999999999 9 999955 999888777643 4555554333 67889999999999875
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0014 Score=58.56 Aligned_cols=140 Identities=14% Similarity=0.040 Sum_probs=90.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----CC-----ceeeccCc-------------
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWT------------- 137 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~~-----i~~~~~D~------------- 137 (268)
.+..+.+||||+ --||+.++++|.+. |.+|+...|+.++.++... .+ +..+.+|.
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 345678999996 89999999999999 9999999998876543221 11 33344553
Q ss_pred -cc-cCCCCEEEEccCCCCCC----C-----hHHH----HH-------HHH---HHhcCCCeEEEEccCeeecCCCCCCC
Q 024417 138 -EA-TQKFPYVIFCAPPSRSL----D-----YPGD----VR-------LAA---LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 138 -~~-~~~~D~Vi~~a~~~~~~----~-----~~~~----~~-------~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (268)
+. ..+.|++|++|+..... + |... ++ ..+ ..+.+...++++||..-+....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~---- 158 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP---- 158 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC----
Confidence 12 56799999999865422 1 2111 11 001 1334567899998876443211
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecCC
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKAD 234 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...+++.+... .-.+-||.+..+.
T Consensus 159 ------~~~--~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 159 ------GSG--VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred ------CCc--ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 111 368999999998877542 4667788777653
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.68 E-value=8.1e-05 Score=68.26 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=46.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcC-----CCCeEEEEeCCCCc--chh----hhc-----C-CceeeccCc-cccCCCCE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEH-----PGCQIYGQTMTADH--HDE----LIN-----M-GITPSLKWT-EATQKFPY 145 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~-----~G~~V~~~~R~~~~--~~~----l~~-----~-~i~~~~~D~-~~~~~~D~ 145 (268)
.||+|+|+ |+||++++..|.... .+.+|+.+++++.. .+. +.. . .+ .+..|. +.++++|+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~-~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSV-VATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCc-eecCCHHHHhCCCCE
Confidence 47999998 999999999998840 04589999996532 111 110 0 11 012343 67899999
Q ss_pred EEEccCCCC
Q 024417 146 VIFCAPPSR 154 (268)
Q Consensus 146 Vi~~a~~~~ 154 (268)
|||+|+...
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999999643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00041 Score=64.97 Aligned_cols=96 Identities=13% Similarity=0.082 Sum_probs=61.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCc-----e---eeccCccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-----T---PSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i-----~---~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+++||.|+|+ |++|+.|++.|.++ |+++|+.+.++....+.+..... + ....+.+.++++|+||.+++..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~ 115 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHG 115 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHH
Confidence 4679999997 99999999988876 78999999875433222211110 0 1111222357899999877653
Q ss_pred CCCChHHHHHHHHHHhcCCCeEEEEccCeeecC
Q 024417 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDC 186 (268)
Q Consensus 154 ~~~~~~~~~~~~~~~~~gvkr~V~~SS~~vYg~ 186 (268)
. ...+...+ + .+ .++|-.|+..-+.+
T Consensus 116 ~----s~~i~~~~-~-~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 116 T----TQEIIKAL-P-KD-LKIVDLSADFRLRD 141 (381)
T ss_pred H----HHHHHHHH-h-CC-CEEEEcCchhccCC
Confidence 2 22222222 2 33 78999999877654
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=6.3e-05 Score=67.35 Aligned_cols=67 Identities=21% Similarity=0.318 Sum_probs=52.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce-eeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-PSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~-~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|+|+|.+|..++..|.+. |++|++.+|+++..+.+...+.. ....+.+.+.++|+||.|.++.
T Consensus 1 m~I~IIG~G~mG~sla~~L~~~--g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~ 68 (279)
T PRK07417 1 MKIGIVGLGLIGGSLGLDLRSL--GHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIG 68 (279)
T ss_pred CeEEEEeecHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHH
Confidence 4799999999999999999999 99999999987766655544432 2222335678999999998864
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.66 E-value=7.1e-05 Score=67.93 Aligned_cols=68 Identities=13% Similarity=0.140 Sum_probs=51.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce------------e-eccCc-cccCCCCEEEEc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------P-SLKWT-EATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~------------~-~~~D~-~~~~~~D~Vi~~ 149 (268)
||+|.|+|+|.+|..++..|.+. |++|++.+|+++..+.+...+.. . ...|. +..+++|+||.|
T Consensus 1 mmkI~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGAGSWGTALAIVLARN--GHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 67999999999999999999999 99999999987666555443211 0 11233 356799999999
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
..+.
T Consensus 79 v~~~ 82 (325)
T PRK00094 79 VPSQ 82 (325)
T ss_pred CCHH
Confidence 8863
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.0001 Score=63.01 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=58.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhc-CCceeeccC-ccccCCCCEEEEccCCCCCCChHH
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN-MGITPSLKW-TEATQKFPYVIFCAPPSRSLDYPG 160 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~-~~i~~~~~D-~~~~~~~D~Vi~~a~~~~~~~~~~ 160 (268)
||++.|+|+|.||..|+++|.+. ||+|+...|+.++ ...... .+....-.. .++.+.+|+||...+.... .+
T Consensus 1 m~~~~i~GtGniG~alA~~~a~a--g~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~a~---~~ 75 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKA--GHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFEAI---PD 75 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhC--CCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHHHH---Hh
Confidence 78999999999999999999999 9999988665443 332221 222222222 3688899999977765432 11
Q ss_pred HHHHHHHHhcCCCeEEEEccCee
Q 024417 161 DVRLAALSWNGEGSFLFTSSSAI 183 (268)
Q Consensus 161 ~~~~~~~~~~gvkr~V~~SS~~v 183 (268)
.++.+ ..+.+ .|+|.-.|..+
T Consensus 76 v~~~l-~~~~~-~KIvID~tnp~ 96 (211)
T COG2085 76 VLAEL-RDALG-GKIVIDATNPI 96 (211)
T ss_pred HHHHH-HHHhC-CeEEEecCCCc
Confidence 22222 12234 46666555543
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00029 Score=59.03 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=57.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~~~D 144 (268)
|+++|+|+ |++|. ++++|.++ |++|++.+|++++.+.+.. ..+..+.+|. + .....|
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 47899986 98876 99999999 9999999998665544322 1234444443 1 134677
Q ss_pred EEEEccCCCCCCChHHHHHHHHHHhcCCC----eEEEEcc
Q 024417 145 YVIFCAPPSRSLDYPGDVRLAALSWNGEG----SFLFTSS 180 (268)
Q Consensus 145 ~Vi~~a~~~~~~~~~~~~~~~~~~~~gvk----r~V~~SS 180 (268)
.+|+.+-... .+.+..++ ++.|++ +||++=.
T Consensus 78 ~lv~~vh~~~----~~~~~~~~-~~~gv~~~~~~~~h~~g 112 (177)
T PRK08309 78 LAVAWIHSSA----KDALSVVC-RELDGSSETYRLFHVLG 112 (177)
T ss_pred EEEEeccccc----hhhHHHHH-HHHccCCCCceEEEEeC
Confidence 8887665542 22333333 566788 8888753
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00032 Score=66.60 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=51.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee----------------eccCccccCCCCEEE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----------------SLKWTEATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~----------------~~~D~~~~~~~D~Vi 147 (268)
+|+|-|+|.|++|..++..|. + |++|+++++++++.+.+. .|..+ ...+.+.++++|++|
T Consensus 6 ~mkI~vIGlGyvGlpmA~~la-~--~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvi 81 (425)
T PRK15182 6 EVKIAIIGLGYVGLPLAVEFG-K--SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYI 81 (425)
T ss_pred CCeEEEECcCcchHHHHHHHh-c--CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEE
Confidence 478999999999999999964 5 799999999998887776 33321 112234678999999
Q ss_pred EccCCC
Q 024417 148 FCAPPS 153 (268)
Q Consensus 148 ~~a~~~ 153 (268)
.|.+..
T Consensus 82 i~Vptp 87 (425)
T PRK15182 82 ITVPTP 87 (425)
T ss_pred EEcCCC
Confidence 999854
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00031 Score=67.52 Aligned_cols=68 Identities=9% Similarity=0.042 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee------------------eccCc-cccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP------------------SLKWT-EATQKFP 144 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~------------------~~~D~-~~~~~~D 144 (268)
||+|.|+|+|++|..++..|.+...|++|++++.++++.+.+....... ...|. +.+.++|
T Consensus 1 ~m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ad 80 (473)
T PLN02353 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEAD 80 (473)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCC
Confidence 6799999999999999999998722478999999888776654322111 01122 2578999
Q ss_pred EEEEccC
Q 024417 145 YVIFCAP 151 (268)
Q Consensus 145 ~Vi~~a~ 151 (268)
++|.|.+
T Consensus 81 vi~I~V~ 87 (473)
T PLN02353 81 IVFVSVN 87 (473)
T ss_pred EEEEEeC
Confidence 9999987
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00016 Score=61.76 Aligned_cols=69 Identities=17% Similarity=0.218 Sum_probs=50.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-CceeeccCccc-cCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTEA-TQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~~D~~~-~~~~D~Vi~~a~~~ 153 (268)
+..++|+|+|.|.+|+++++.|.+. |++|++.++++++...+... +.+.+..+ +. ..++|+++.|+...
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~--G~~Vvv~D~~~~~~~~~~~~~g~~~v~~~-~l~~~~~Dv~vp~A~~~ 96 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEE--GAKLIVADINEEAVARAAELFGATVVAPE-EIYSVDADVFAPCALGG 96 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcCCEEEcch-hhccccCCEEEeccccc
Confidence 3457899999999999999999999 99999999987665554332 44333221 22 24899999887643
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00035 Score=64.88 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=64.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--------------------cCc-cccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--------------------KWT-EATQKF 143 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--------------------~D~-~~~~~~ 143 (268)
|||-|+|+||+|.-.+..|.+. ||+|++++.++++.+.+.. |..++. .|. ++++++
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~--GHeVv~vDid~~KV~~ln~-g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a 77 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAEL--GHEVVCVDIDESKVELLNK-GISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA 77 (414)
T ss_pred CceEEECCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHhC-CCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence 6899999999999999999999 9999999999887766543 222211 122 267899
Q ss_pred CEEEEccCCCCCCC------hHHHHHHHHHHhcCCCeEEEEccCeeec
Q 024417 144 PYVIFCAPPSRSLD------YPGDVRLAALSWNGEGSFLFTSSSAIYD 185 (268)
Q Consensus 144 D~Vi~~a~~~~~~~------~~~~~~~~~~~~~gvkr~V~~SS~~vYg 185 (268)
|++|.+.+.....+ |++....-+.....-+++|.+=|+-+-|
T Consensus 78 dv~fIavgTP~~~dg~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvG 125 (414)
T COG1004 78 DVVFIAVGTPPDEDGSADLSYVEAVAKDIGEILDGKAVVVIKSTVPVG 125 (414)
T ss_pred CEEEEEcCCCCCCCCCccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCC
Confidence 99999987533222 4444333332333333666665554444
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00015 Score=56.66 Aligned_cols=89 Identities=17% Similarity=0.225 Sum_probs=53.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchhhhcC-----C---ceeeccCccccCCCCEEEEccCCCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINM-----G---ITPSLKWTEATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~l~~~-----~---i~~~~~D~~~~~~~D~Vi~~a~~~~~ 155 (268)
||.|+|+ |++|+.|++.|.+ +|..++..+..... .-..+... + ......|.+.+.++|+||.|.+...
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~- 78 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA- 78 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH-
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH-
Confidence 6899995 9999999999998 58888776654433 22222111 1 1122234456799999999876542
Q ss_pred CChHHHHHHHHHHhcCCCeEEEEccC
Q 024417 156 LDYPGDVRLAALSWNGEGSFLFTSSS 181 (268)
Q Consensus 156 ~~~~~~~~~~~~~~~gvkr~V~~SS~ 181 (268)
.......+ .+.|+ ++|=.|+.
T Consensus 79 ---~~~~~~~~-~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 79 ---SKELAPKL-LKAGI-KVIDLSGD 99 (121)
T ss_dssp ---HHHHHHHH-HHTTS-EEEESSST
T ss_pred ---HHHHHHHH-hhCCc-EEEeCCHH
Confidence 22222222 33454 66666653
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00023 Score=71.25 Aligned_cols=68 Identities=12% Similarity=0.254 Sum_probs=50.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-ccc-CCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~-~~~D~Vi~~a~~~ 153 (268)
..+++|.|+|.|.+|+.+++.|.+. |++|++.+|+... ......|+.. ..|. +.+ .++|+||.|.++.
T Consensus 50 ~~~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~-~~A~~~Gv~~-~~d~~e~~~~~aDvViLavP~~ 119 (667)
T PLN02712 50 TTQLKIAIIGFGNYGQFLAKTLISQ--GHTVLAHSRSDHS-LAARSLGVSF-FLDPHDLCERHPDVILLCTSII 119 (667)
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHH-HHHHHcCCEE-eCCHHHHhhcCCCEEEEcCCHH
Confidence 4467899999999999999999999 9999999997433 2233345543 2333 223 5699999998764
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00034 Score=55.83 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=64.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-----cccCCCCEEEEccCCCCCCChH
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRSLDYP 159 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-----~~~~~~D~Vi~~a~~~~~~~~~ 159 (268)
++|+++|+| -|..+++.|.+. |++|+++|.+++..+.....+++.+..|. +.-+++|.|+-+=+|.. ..
T Consensus 18 ~kileIG~G-fG~~vA~~L~~~--G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~e---l~ 91 (134)
T PRK04148 18 KKIVELGIG-FYFKVAKKLKES--GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRD---LQ 91 (134)
T ss_pred CEEEEEEec-CCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHH---HH
Confidence 589999999 999999999999 99999999998877777677777777764 35689999997776643 23
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 024417 160 GDVRLAALSWNGEGSFLF 177 (268)
Q Consensus 160 ~~~~~~~~~~~gvkr~V~ 177 (268)
..+.++. ++.+..-+|.
T Consensus 92 ~~~~~la-~~~~~~~~i~ 108 (134)
T PRK04148 92 PFILELA-KKINVPLIIK 108 (134)
T ss_pred HHHHHHH-HHcCCCEEEE
Confidence 3344443 4555554444
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00021 Score=62.33 Aligned_cols=64 Identities=16% Similarity=0.124 Sum_probs=43.7
Q ss_pred EEEc-c-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---------cccCCCCEEEEccCCCC
Q 024417 88 LIVG-P-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 88 LI~G-a-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---------~~~~~~D~Vi~~a~~~~ 154 (268)
.|++ + |++|++|+++|+++ |++|++++|...... ....+++.+..+. +.++++|+|||+|+...
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred eecCccchHHHHHHHHHHHhC--CCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 4664 4 99999999999999 999999987543211 1112344432221 24568999999999754
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=9e-05 Score=68.19 Aligned_cols=72 Identities=17% Similarity=0.189 Sum_probs=50.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|+|+|+ |+||+.++++|.++. | .+++.+.|+.++...+...-......+. +.+.++|+|||+++...
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPK 227 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCc
Confidence 34578999998 999999999998641 4 5899999987666554321100111122 47889999999998643
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0032 Score=54.57 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=78.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhh---c----CCceeeccC----cc---------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI---N----MGITPSLKW----TE--------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~---~----~~i~~~~~D----~~--------- 138 (268)
..++.+||||+ +-||..++++|.++ |+.|+++.|..+. .+.+. . ..+.....| .+
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~ 80 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAA 80 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHH
Confidence 34678999997 89999999999988 9998888886543 22211 1 122222233 21
Q ss_pred --ccCCCCEEEEccCCCCC----CC-----hHHHHH----------HHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 139 --ATQKFPYVIFCAPPSRS----LD-----YPGDVR----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~----~~-----~~~~~~----------~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
.....|++|++|+.... .+ +.+.+. +.+......+++|.+||..-+ .....
T Consensus 81 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~------- 152 (251)
T COG1028 81 EEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG------- 152 (251)
T ss_pred HHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC-------
Confidence 24569999999996432 11 111110 011000001199999997754 32110
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
. ..|+.+|.+.+.+.... + ...+-||.+-
T Consensus 153 ---~--~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 153 ---Q--AAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred ---c--chHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 1 57888998776544332 2 5778888443
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00017 Score=65.04 Aligned_cols=70 Identities=17% Similarity=0.322 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc-Cc-cccCCCCEEEEccCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK-WT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~-D~-~~~~~~D~Vi~~a~~ 152 (268)
....++|+|+|+|.+|+.+++.|+.. |++|++.+|++++.......+...+.. +. +.+.++|+||++.+.
T Consensus 148 ~l~gk~v~IiG~G~iG~avA~~L~~~--G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 148 TIHGSNVMVLGFGRTGMTIARTFSAL--GARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCCCCEEEEEcChHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCCh
Confidence 34457999999999999999999999 999999999876654444445544432 22 467899999998754
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00019 Score=65.02 Aligned_cols=69 Identities=19% Similarity=0.312 Sum_probs=54.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC-c-cccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-T-EATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D-~-~~~~~~D~Vi~~a~~ 152 (268)
...++|+|+|+|.+|+.+++.|+.. |.+|++.+|++++.......+.+....+ . +.+.++|+||++++.
T Consensus 150 l~g~kvlViG~G~iG~~~a~~L~~~--Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 150 IHGSNVLVLGFGRTGMTLARTLKAL--GANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCCh
Confidence 3457999999999999999999999 9999999998766555555566554322 2 467899999998754
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0003 Score=62.99 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-----------hhhcCCc-e----------e-eccCcccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMGI-T----------P-SLKWTEAT 140 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-----------~l~~~~i-~----------~-~~~D~~~~ 140 (268)
|++|.|+|+|.+|..++..|+.. |++|++.++++++.+ .+.+.+. . . ...|.+.+
T Consensus 3 ~~kI~VIG~G~mG~~ia~~la~~--g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 80 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVA--GYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDL 80 (282)
T ss_pred ccEEEEEccCHHHHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHHh
Confidence 57899999999999999999999 999999999876552 1222221 0 0 11244467
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
+++|+||.++.+.
T Consensus 81 ~~aDlVi~av~e~ 93 (282)
T PRK05808 81 KDADLVIEAATEN 93 (282)
T ss_pred ccCCeeeeccccc
Confidence 8999999998764
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00044 Score=64.95 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=47.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----------------CCceee-ccCc-cccCCCCEE
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----------------MGITPS-LKWT-EATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----------------~~i~~~-~~D~-~~~~~~D~V 146 (268)
|||.|+|+|++|..++..| +. ||+|+++++++++.+.+.+ .+.... ..|. ++..++|+|
T Consensus 1 mkI~VIGlGyvGl~~A~~l-A~--G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 1 MKITISGTGYVGLSNGLLI-AQ--NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred CEEEEECCCHHHHHHHHHH-Hh--CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 3799999999999999655 57 9999999999887766543 111111 1122 356899999
Q ss_pred EEccCCC
Q 024417 147 IFCAPPS 153 (268)
Q Consensus 147 i~~a~~~ 153 (268)
|.|.+..
T Consensus 78 ii~Vpt~ 84 (388)
T PRK15057 78 IIATPTD 84 (388)
T ss_pred EEeCCCC
Confidence 9998754
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00096 Score=60.59 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchhhhc----------CCceeeccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN----------MGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~l~~----------~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
+||.|+|+|.+|+.++..|+.. | ++|..+++++++.+.+.. ........+.+.+.++|+||++++.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~--g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQ--GIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCC
Confidence 3899999999999999999998 7 689999998776443211 1122233445678999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 79 ~~ 80 (306)
T cd05291 79 PQ 80 (306)
T ss_pred CC
Confidence 43
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00039 Score=61.52 Aligned_cols=67 Identities=16% Similarity=0.284 Sum_probs=52.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC----eEEEE-eCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQ-TMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~----~V~~~-~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|..+++.|++. |+ +|++. +|++++.+.+...|+.......+..+++|+||.|..+.
T Consensus 1 ~kI~~IG~G~mG~a~a~~L~~~--g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~~~ 72 (266)
T PLN02688 1 FRVGFIGAGKMAEAIARGLVAS--GVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKPQ 72 (266)
T ss_pred CeEEEECCcHHHHHHHHHHHHC--CCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEECcH
Confidence 4799999999999999999998 88 89988 88877766665566654322224678999999999543
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00012 Score=68.48 Aligned_cols=66 Identities=18% Similarity=0.252 Sum_probs=48.5
Q ss_pred EEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhc----CCceeeccCc-------cccCCCCEEEEccCCC
Q 024417 87 LLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN----MGITPSLKWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~----~~i~~~~~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
|+|+|+|++|+.+++.|.++. .+ +|++.+|+.++.+.+.. ..++....|. +.++++|+||+|+++.
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~-~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRG-PFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTT-CE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCC-CCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 688999999999999999882 34 89999999887666532 3566666554 2678999999999986
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0037 Score=56.81 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.4
Q ss_pred CCCCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 82 VGENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 82 ~~m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
+..|.+||||+ .-||+.++++|.++ |.+|++ .|+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeC
Confidence 45678999998 78999999999999 999988 554
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00034 Score=62.86 Aligned_cols=67 Identities=21% Similarity=0.269 Sum_probs=56.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||-++|.|-.|..++++|++. ||+|++.+|++++ .+.+...|.+...-..++..++|+||-|.+..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~a--G~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~ 68 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKA--GHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDD 68 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHC--CCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCH
Confidence 4789999999999999999999 9999999999888 55555567766544447899999999998864
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00059 Score=64.84 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=67.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--CceeeccCc---c-----ccCCCCEEEEccC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT---E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~i~~~~~D~---~-----~~~~~D~Vi~~a~ 151 (268)
..+++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+... ++..+.+|. + .+.++|.||-+..
T Consensus 229 ~~~~~iiIiG~G~~g~~l~~~L~~~--~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 229 KPVKRVMIVGGGNIGYYLAKLLEKE--GYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence 3478999999999999999999999 99999999998877666543 566677775 1 4678999986555
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEccCeee
Q 024417 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
... .+.....+++..+++++|.......|
T Consensus 307 ~~~----~n~~~~~~~~~~~~~~ii~~~~~~~~ 335 (453)
T PRK09496 307 DDE----ANILSSLLAKRLGAKKVIALVNRPAY 335 (453)
T ss_pred CcH----HHHHHHHHHHHhCCCeEEEEECCcch
Confidence 321 11112222344567777766654433
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00016 Score=60.51 Aligned_cols=71 Identities=18% Similarity=0.239 Sum_probs=51.0
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 80 GGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 80 ~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.....++|.|+|.|-||+.+++.|..- |.+|++.+|...........+++.. +. +.+..+|+|+.+.+.+.
T Consensus 32 ~~l~g~tvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~~~~~~~--~l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 32 RELRGKTVGIIGYGRIGRAVARRLKAF--GMRVIGYDRSPKPEEGADEFGVEYV--SLDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp S-STTSEEEEESTSHHHHHHHHHHHHT--T-EEEEEESSCHHHHHHHHTTEEES--SHHHHHHH-SEEEE-SSSST
T ss_pred cccCCCEEEEEEEcCCcCeEeeeeecC--CceeEEecccCChhhhcccccceee--ehhhhcchhhhhhhhhcccc
Confidence 344568999999999999999999999 9999999998765432333344332 33 47788999998888654
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0002 Score=64.27 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=50.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee----------eccCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----------SLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~----------~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
|+|+|+|+|.+|..++..|.+. |++|+.++|++++.+.+...+... ...|.+..+++|+||.+.....
T Consensus 1 m~I~IiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vila~k~~~ 78 (304)
T PRK06522 1 MKIAILGAGAIGGLFGAALAQA--GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAELGPQDLVILAVKAYQ 78 (304)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHcCCCCEEEEeccccc
Confidence 4799999999999999999999 999999999776665555444422 0112223478999998877653
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00021 Score=65.79 Aligned_cols=68 Identities=16% Similarity=0.149 Sum_probs=43.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCCCcchhhhcCCceeeccCc--cccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSLKWT--EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--~~~~~~D~Vi~~a~ 151 (268)
|++|+|+|+ |++|+.|++.|.++ +|..++.++.+.....+.+.-.+.+....|. +.+.++|+||.+++
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCC
Confidence 568999997 99999999999887 2334668887764433333222233333333 23456777777664
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00012 Score=58.40 Aligned_cols=70 Identities=24% Similarity=0.232 Sum_probs=52.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchhhhcC----CceeeccC-c-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM----GITPSLKW-T-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~l~~~----~i~~~~~D-~-~~~~~~D~Vi~~a~~~~ 154 (268)
..++++|+|+|-.|+.++..|.+. |.+ |+++.|+.++.+.+... .++....+ . +.+.++|+||++.+...
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~--g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAAL--GAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGM 87 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHT--TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCC
Confidence 457999999999999999999999 985 99999998876665331 23343332 2 36789999999987654
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00013 Score=65.67 Aligned_cols=66 Identities=20% Similarity=0.316 Sum_probs=52.3
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+|.|+|+|.+|..+++.|++. |++|++.+|++++.+.+...+........+.++++|+||.|.+..
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKA--GYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCH
Confidence 478999999999999999999 999999999987776666555433221225678999999998753
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00025 Score=54.53 Aligned_cols=64 Identities=22% Similarity=0.313 Sum_probs=53.5
Q ss_pred EEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc--------ccCCCCEEEEccCC
Q 024417 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE--------ATQKFPYVIFCAPP 152 (268)
Q Consensus 87 VLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~--------~~~~~D~Vi~~a~~ 152 (268)
|+|+|.|.+|+.+++.|.+. +.+|++++++++..+.+...++..+.+|.. .+.+++.|+-+...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~--~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~ 72 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEG--GIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDD 72 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHT--TSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSS
T ss_pred eEEEcCCHHHHHHHHHHHhC--CCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCC
Confidence 68999999999999999998 889999999998888888888888888751 46789999877663
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0012 Score=60.13 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=60.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHh-cCCCCeEEEEeCCCCcc---hhhhcCC-ceeec----cC-ccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHH---DELINMG-ITPSL----KW-TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~-~~~G~~V~~~~R~~~~~---~~l~~~~-i~~~~----~D-~~~~~~~D~Vi~~a~~~ 153 (268)
|||+|+|+ |.||++++..|.. ..-+++++.++|++... -.+...+ ...+. .| .+.++++|+||.|++..
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 58999998 9999999998854 21156888989875431 1122211 11222 24 36789999999999975
Q ss_pred CCCC-----h----HHHHHHHH--HHhcCCCeEEEEccCee
Q 024417 154 RSLD-----Y----PGDVRLAA--LSWNGEGSFLFTSSSAI 183 (268)
Q Consensus 154 ~~~~-----~----~~~~~~~~--~~~~gvkr~V~~SS~~v 183 (268)
.... . .+.+++++ .++.+.+++|.+.|--+
T Consensus 81 ~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 81 RKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 4321 1 11233333 24567788888776433
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00029 Score=56.90 Aligned_cols=70 Identities=21% Similarity=0.202 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc-CCc---eeeccCc-cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGI---TPSLKWT-EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~-~~i---~~~~~D~-~~~~~~D~Vi~~a~~~~~ 155 (268)
.++|+|+|+|.+|+.+++.|.+. | ++|++.+|++++.+.+.. .+. .....|. +.++++|+||.+.++...
T Consensus 19 ~~~i~iiG~G~~g~~~a~~l~~~--g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~~~~~~~~ 94 (155)
T cd01065 19 GKKVLILGAGGAARAVAYALAEL--GAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADLIINTTPVGMK 94 (155)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCEEEeCcCCCCC
Confidence 46899999999999999999988 6 789999998776554332 222 1222343 357899999999987653
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0012 Score=53.09 Aligned_cols=70 Identities=20% Similarity=0.186 Sum_probs=51.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc----C--CceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----M--GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~----~--~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+ |.+|.+++..|....-..++..+++++++.+. +.. . .......+.+.++++|+||.+++..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 58999998 99999999999988334589999998654321 111 1 1223335667999999999999865
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 81 ~ 81 (141)
T PF00056_consen 81 R 81 (141)
T ss_dssp S
T ss_pred c
Confidence 4
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00026 Score=67.32 Aligned_cols=66 Identities=15% Similarity=0.228 Sum_probs=54.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCcc--------ccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTE--------ATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~~--------~~~~~D~Vi~~a~~ 152 (268)
|+|+|+|+|.+|+.+++.|.++ |++|+++++++++.+.+.. .+++.+.+|.. .+.++|.||.+...
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~--g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGE--NNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 4899999999999999999999 9999999998887776654 56777777641 26789999887654
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0002 Score=64.06 Aligned_cols=68 Identities=16% Similarity=0.221 Sum_probs=52.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC----eEEEEeCCCCcchhhhc-CCceeeccCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~----~V~~~~R~~~~~~~l~~-~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
++|.|+|+|.+|..+++.|++. |+ +|++.+|++++.+.+.. .+++......+.+.++|+||.|..|..
T Consensus 3 ~~IgfIG~G~MG~aia~~L~~~--g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~ 75 (272)
T PRK12491 3 KQIGFIGCGNMGIAMIGGMINK--NIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDL 75 (272)
T ss_pred CeEEEECccHHHHHHHHHHHHC--CCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHH
Confidence 5899999999999999999987 64 79999998777666543 565443222246789999999998754
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00025 Score=56.17 Aligned_cols=91 Identities=15% Similarity=0.197 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchhhhcC-CceeeccCc-cccCCCCEEEEccCCCCCCChHH
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPPSRSLDYPG 160 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~l~~~-~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~~~~ 160 (268)
.+||-|+|+|-+|.+|++.|.+. ||+|.++. |+.+..+.+... +-..+ .+. +.+..+|.||.+.+.+. ..
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~a--g~~v~~v~srs~~sa~~a~~~~~~~~~-~~~~~~~~~aDlv~iavpDda----I~ 82 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARA--GHEVVGVYSRSPASAERAAAFIGAGAI-LDLEEILRDADLVFIAVPDDA----IA 82 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHT--TSEEEEESSCHH-HHHHHHC--TT------TTGGGCC-SEEEE-S-CCH----HH
T ss_pred ccEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeCCcccccccccccccccc-cccccccccCCEEEEEechHH----HH
Confidence 56999999999999999999999 99999874 554443333221 11111 233 57889999998776542 33
Q ss_pred HHHHHHHHh---cCCCeEEEEccC
Q 024417 161 DVRLAALSW---NGEGSFLFTSSS 181 (268)
Q Consensus 161 ~~~~~~~~~---~gvkr~V~~SS~ 181 (268)
.+..-+... ..-+-+|++|..
T Consensus 83 ~va~~La~~~~~~~g~iVvHtSGa 106 (127)
T PF10727_consen 83 EVAEQLAQYGAWRPGQIVVHTSGA 106 (127)
T ss_dssp HHHHHHHCC--S-TT-EEEES-SS
T ss_pred HHHHHHHHhccCCCCcEEEECCCC
Confidence 333322111 123557888753
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00077 Score=61.10 Aligned_cols=68 Identities=19% Similarity=0.256 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCc------e-------eeccCc-cccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI------T-------PSLKWT-EATQKFP 144 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i------~-------~~~~D~-~~~~~~D 144 (268)
+++|.|+|+|.+|..++..|++. |++|++.+++++..+.+.. .+. . ....|. +.++++|
T Consensus 4 ~~~I~vIGaG~mG~~iA~~l~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD 81 (311)
T PRK06130 4 IQNLAIIGAGTMGSGIAALFARK--GLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGAD 81 (311)
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCC
Confidence 56899999999999999999999 9999999998765543322 010 0 111233 3578999
Q ss_pred EEEEccCCC
Q 024417 145 YVIFCAPPS 153 (268)
Q Consensus 145 ~Vi~~a~~~ 153 (268)
+||.+..+.
T Consensus 82 lVi~av~~~ 90 (311)
T PRK06130 82 LVIEAVPEK 90 (311)
T ss_pred EEEEeccCc
Confidence 999998775
|
|
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00051 Score=61.26 Aligned_cols=68 Identities=18% Similarity=0.374 Sum_probs=49.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
|+|.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+.+...++.....+.+.+.++|+||.|.++..
T Consensus 1 m~I~iIG~G~mG~sla~~l~~~--g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aD~Vilavp~~~ 70 (275)
T PRK08507 1 MKIGIIGLGLMGGSLGLALKEK--GLISKVYGYDHNELHLKKALELGLVDEIVSFEELKKCDVIFLAIPVDA 70 (275)
T ss_pred CEEEEEccCHHHHHHHHHHHhc--CCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHhcCCEEEEeCcHHH
Confidence 3799999999999999999998 75 78888988766655544554211223332345999999988753
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00035 Score=63.38 Aligned_cols=68 Identities=24% Similarity=0.417 Sum_probs=51.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCcee-eccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~-~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+++|.|+|+|.+|..+++.|.+. |+ +|++.+|+++..+.....++.. ...+. +.+.++|+||.|.++.
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~--g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~ 77 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRL--GLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVG 77 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHH
Confidence 46899999999999999999998 74 8999999877665555455321 11232 4678999999998864
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00044 Score=62.53 Aligned_cols=66 Identities=23% Similarity=0.335 Sum_probs=50.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccC---CCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQ---KFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~---~~D~Vi~~a~~~ 153 (268)
|+|.|+|.|.+|..+++.|++. |++|++.+|++++.+.+...++... .++ +..+ .+|+|+.|.+..
T Consensus 1 m~Ig~IGlG~mG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~~g~~~~-~s~~~~~~~~~~advVi~~vp~~ 70 (299)
T PRK12490 1 MKLGLIGLGKMGGNMAERLRED--GHEVVGYDVNQEAVDVAGKLGITAR-HSLEELVSKLEAPRTIWVMVPAG 70 (299)
T ss_pred CEEEEEcccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCCCeec-CCHHHHHHhCCCCCEEEEEecCc
Confidence 3799999999999999999999 9999999998877766655565432 233 3333 368999888765
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00033 Score=64.06 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=51.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--------Cce----ee-ccCc-cccCCCCEEEEc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--------GIT----PS-LKWT-EATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--------~i~----~~-~~D~-~~~~~~D~Vi~~ 149 (268)
||+|.|+|+|-+|..++..|.+. |++|++.+|++++.+.+... +.. .. ..|+ +.++++|+||.+
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~--G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASK--GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 56899999999999999999999 99999999987665544432 211 11 1233 457889999988
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
....
T Consensus 82 v~~~ 85 (328)
T PRK14618 82 VPSK 85 (328)
T ss_pred CchH
Confidence 8765
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.001 Score=61.52 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=44.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-hh---c-----------CCceeeccCccccCCCCEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-LI---N-----------MGITPSLKWTEATQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-l~---~-----------~~i~~~~~D~~~~~~~D~V 146 (268)
+|+||+|+|+ |++|+.|++.|.+. |..+++++.++.....+ +. . ....+...|.+.+.++|+|
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~-p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~DvV 80 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANH-PWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAVDDVDIV 80 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcC-CCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHhcCCCEE
Confidence 4679999996 99999999999875 67799988554322211 11 0 0111112244455789999
Q ss_pred EEccCCC
Q 024417 147 IFCAPPS 153 (268)
Q Consensus 147 i~~a~~~ 153 (268)
+.+.+..
T Consensus 81 f~a~p~~ 87 (349)
T PRK08664 81 FSALPSD 87 (349)
T ss_pred EEeCChh
Confidence 8876653
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00073 Score=60.69 Aligned_cols=68 Identities=22% Similarity=0.265 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCce----------------eeccCc-cc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGIT----------------PSLKWT-EA 139 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~----------------~~~~D~-~~ 139 (268)
+++|.|+|+|.+|..++..|.+. |++|++.++++++.+.+.. .+++ ....|. +.
T Consensus 1 ~~~V~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 1 IEKLVVVGAGVMGRGIAYVFAVS--GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred CcEEEEECccHHHHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 36899999999999999999999 9999999998776544321 1110 011233 46
Q ss_pred cCCCCEEEEccCCC
Q 024417 140 TQKFPYVIFCAPPS 153 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (268)
++++|+||.|.+..
T Consensus 79 ~~~aD~Vi~avpe~ 92 (288)
T PRK09260 79 VADADLVIEAVPEK 92 (288)
T ss_pred hcCCCEEEEeccCC
Confidence 88999999988754
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00083 Score=60.49 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=50.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-----------hhcCCce-e-----------eccCcccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGIT-P-----------SLKWTEAT 140 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-----------l~~~~i~-~-----------~~~D~~~~ 140 (268)
+++|.|+|+|.+|..++..|+.. |++|+..+++++..+. +...+.- . ...|.+.+
T Consensus 5 ~~~V~ViGaG~mG~~iA~~~a~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 5 IQRVGVVGAGQMGAGIAEVCARA--GVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 56899999999999999999999 9999999998776443 2222210 0 12344568
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
+++|.||-+....
T Consensus 83 ~~~d~ViEav~E~ 95 (286)
T PRK07819 83 ADRQLVIEAVVED 95 (286)
T ss_pred CCCCEEEEecccC
Confidence 9999999987654
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00086 Score=65.83 Aligned_cols=67 Identities=25% Similarity=0.333 Sum_probs=57.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~ 152 (268)
..+|+|+|+|.+|++++++|.++ |++|++++.++++.+.+++.+.+.+.+|. + -++++|.|+-+.+.
T Consensus 417 ~~hiiI~G~G~~G~~la~~L~~~--g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVGYGRVGSLLGEKLLAA--GIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEECCChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCC
Confidence 36899999999999999999999 99999999999888888888888888885 1 35688888765554
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00077 Score=55.96 Aligned_cols=37 Identities=14% Similarity=0.192 Sum_probs=32.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
.+.++|+|+ |.||+.++++|.++ |++|.+++|+.+..
T Consensus 16 gk~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~~ 53 (169)
T PRK06720 16 GKVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQESG 53 (169)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHHH
Confidence 467899997 89999999999999 99999999876543
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=59.25 Aligned_cols=67 Identities=13% Similarity=0.218 Sum_probs=51.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCC-cchhhhc-CCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD-HHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~-~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
|+|.|+|+|.+|..+++.|++. | ++|++.+|+++ +.+.+.. .+++.. .|. +...++|+||.+..+..
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~--g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~-~~~~e~~~~aDvVilav~p~~ 77 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHA--NVVKGEQITVSNRSNETRLQELHQKYGVKGT-HNKKELLTDANILFLAMKPKD 77 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCcceEEEECCCCHHHHHHHHHhcCceEe-CCHHHHHhcCCEEEEEeCHHH
Confidence 5899999999999999999988 7 78999998754 3444433 355433 233 46789999999998864
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0012 Score=59.42 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=50.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----------CCc-e-----------eeccCcccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGI-T-----------PSLKWTEAT 140 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----------~~i-~-----------~~~~D~~~~ 140 (268)
.++|.|+|+|.+|..++..|+.. |++|++.+++++..+.... .+. . ....|.+.+
T Consensus 4 ~~kI~vIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 81 (292)
T PRK07530 4 IKKVGVIGAGQMGNGIAHVCALA--GYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLEDL 81 (292)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHHHh
Confidence 46899999999999999999999 9999999998765443210 111 0 111234567
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
.++|+||.+.+..
T Consensus 82 ~~aD~Vieavpe~ 94 (292)
T PRK07530 82 ADCDLVIEAATED 94 (292)
T ss_pred cCCCEEEEcCcCC
Confidence 8999999988764
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0024 Score=60.81 Aligned_cols=69 Identities=22% Similarity=0.273 Sum_probs=52.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC-cc----hhhhcCCceeeccCc--cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD-HH----DELINMGITPSLKWT--EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~----~~l~~~~i~~~~~D~--~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|.+|..+++.|+++ |++|++.+++.. .. +++...+++.+..|. +...++|+||++++...
T Consensus 5 ~k~v~iiG~g~~G~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~~ 80 (450)
T PRK14106 5 GKKVLVVGAGVSGLALAKFLKKL--GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVPL 80 (450)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCCC
Confidence 46899999988999999999999 999999999752 22 234445777666554 24568999999988543
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00095 Score=60.39 Aligned_cols=66 Identities=20% Similarity=0.234 Sum_probs=51.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccC---CCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQ---KFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~---~~D~Vi~~a~~~ 153 (268)
|+|.|+|.|.+|..+++.|++. |++|++.+|++++.+.+...++.... ++ +..+ ++|+|+.+.+..
T Consensus 1 m~Ig~IGlG~MG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~~g~~~~~-~~~e~~~~~~~~dvvi~~v~~~ 70 (301)
T PRK09599 1 MQLGMIGLGRMGGNMARRLLRG--GHEVVGYDRNPEAVEALAEEGATGAD-SLEELVAKLPAPRVVWLMVPAG 70 (301)
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCeecC-CHHHHHhhcCCCCEEEEEecCC
Confidence 3799999999999999999999 99999999998877766656654431 22 2333 478998887764
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.001 Score=64.41 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------------------CC-ceeeccCc-cccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------------------MG-ITPSLKWT-EATQK 142 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------------------~~-i~~~~~D~-~~~~~ 142 (268)
.++|.|+|+|.+|+.++..|+.. |++|++.++++++.+.+.. .+ +.. ..|+ +++++
T Consensus 4 i~kIavIG~G~MG~~iA~~la~~--G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~-~~~~~ea~~~ 80 (495)
T PRK07531 4 IMKAACIGGGVIGGGWAARFLLA--GIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF-CASLAEAVAG 80 (495)
T ss_pred cCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe-eCCHHHHhcC
Confidence 36899999999999999999999 9999999998776543211 11 211 1233 47899
Q ss_pred CCEEEEccCCC
Q 024417 143 FPYVIFCAPPS 153 (268)
Q Consensus 143 ~D~Vi~~a~~~ 153 (268)
+|+|+-+.+..
T Consensus 81 aD~Vieavpe~ 91 (495)
T PRK07531 81 ADWIQESVPER 91 (495)
T ss_pred CCEEEEcCcCC
Confidence 99999887765
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00063 Score=57.43 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=48.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeecc---Cc----cccCCCCEEEEcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLK---WT----EATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~---D~----~~~~~~D~Vi~~a 150 (268)
.++++|+|+ |.+|+.+++.|.++ |++|+.+.|+.++.+.+.. .+.+.... |. +.+.++|+||++.
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 468999996 99999999999998 9999999998766544321 12222222 21 3577899888866
Q ss_pred CCC
Q 024417 151 PPS 153 (268)
Q Consensus 151 ~~~ 153 (268)
+..
T Consensus 106 ~~g 108 (194)
T cd01078 106 AAG 108 (194)
T ss_pred CCC
Confidence 543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0014 Score=59.33 Aligned_cols=66 Identities=15% Similarity=0.141 Sum_probs=52.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|+|+|.+|..+++.|.+. |++|.+.+|++++.+.+...+.... .+. +.+..+|+|+.+.+..
T Consensus 1 M~Ig~IGlG~mG~~la~~L~~~--g~~V~~~dr~~~~~~~l~~~g~~~~-~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 1 MQLGLIGLGRMGANIVRRLAKR--GHDCVGYDHDQDAVKAMKEDRTTGV-ANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred CEEEEEcchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCccc-CCHHHHHhhcCCCCEEEEEcCch
Confidence 3799999999999999999999 9999999999888777765554332 222 2456789999988775
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0004 Score=59.90 Aligned_cols=68 Identities=19% Similarity=0.212 Sum_probs=50.1
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--------CCce--eeccC-ccccCCCCEEEEccCC
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGIT--PSLKW-TEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--------~~i~--~~~~D-~~~~~~~D~Vi~~a~~ 152 (268)
|||.|+| +|.+|+.+++.|.+. |++|+..+|++++.+.+.. .++. ....+ .+.++++|+||.+..+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~--G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~ 78 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA--GNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPW 78 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCH
Confidence 4799997 799999999999999 9999999998776554322 1211 11123 2567899999988887
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 79 ~~ 80 (219)
T TIGR01915 79 DH 80 (219)
T ss_pred HH
Confidence 53
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0016 Score=58.69 Aligned_cols=68 Identities=16% Similarity=0.186 Sum_probs=50.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-----------hhcCC------------ceeeccCcccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMG------------ITPSLKWTEAT 140 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-----------l~~~~------------i~~~~~D~~~~ 140 (268)
+++|.|+|+|.+|..++..|+.. |++|++.++++++.+. +.+.+ ......+.+.+
T Consensus 4 ~~~V~vIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 4 IKKVGVVGAGQMGSGIAQLAAAA--GMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred cCEEEEECCCHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 56899999999999999999999 9999999998765432 11111 11122234578
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
+++|+||-+....
T Consensus 82 ~~aD~Vieav~e~ 94 (295)
T PLN02545 82 RDADFIIEAIVES 94 (295)
T ss_pred CCCCEEEEcCccC
Confidence 9999999987643
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0052 Score=56.11 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=51.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc-----CCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||.|+|+|.||..++..|... |. ++..++++.++... +.. ..+.....|.+.++++|+||.+++..
T Consensus 7 ~ki~iiGaG~vG~~~a~~l~~~--~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~~ 84 (315)
T PRK00066 7 NKVVLVGDGAVGSSYAYALVNQ--GIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGAP 84 (315)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCCC
Confidence 5899999999999999999988 76 89999997765432 111 12233334557899999999999864
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 85 ~ 85 (315)
T PRK00066 85 Q 85 (315)
T ss_pred C
Confidence 3
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0013 Score=59.12 Aligned_cols=68 Identities=15% Similarity=0.238 Sum_probs=49.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc----------CCce------------eeccCc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----------MGIT------------PSLKWT 137 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~----------~~i~------------~~~~D~ 137 (268)
+++|.|+|+|.+|..++..|... |++|++.+++++..+.. .. .+.. ....|.
T Consensus 3 i~~I~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 80 (291)
T PRK06035 3 IKVIGVVGSGVMGQGIAQVFART--GYDVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRTSTSY 80 (291)
T ss_pred CcEEEEECccHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEeeCCH
Confidence 46899999999999999999999 99999999987654321 10 1110 011233
Q ss_pred cccCCCCEEEEccCCC
Q 024417 138 EATQKFPYVIFCAPPS 153 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~ 153 (268)
+.++++|.||.+.+..
T Consensus 81 ~~~~~aDlVieav~e~ 96 (291)
T PRK06035 81 ESLSDADFIVEAVPEK 96 (291)
T ss_pred HHhCCCCEEEEcCcCc
Confidence 4678999999988765
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0024 Score=57.45 Aligned_cols=67 Identities=18% Similarity=0.219 Sum_probs=49.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec------------cCcc-ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWTE-ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~------------~D~~-~~~~~D~Vi~~a~ 151 (268)
|||+|+|+|.+|..++..|.+. |++|+.++| +++.+.+...++.... .|.+ ....+|+||.+..
T Consensus 1 mkI~IiG~G~iG~~~a~~L~~~--g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk 77 (305)
T PRK12921 1 MRIAVVGAGAVGGTFGGRLLEA--GRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVK 77 (305)
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEec
Confidence 4799999999999999999999 999999999 6665555544433211 1222 3478999998877
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 78 ~~~ 80 (305)
T PRK12921 78 AYQ 80 (305)
T ss_pred ccC
Confidence 543
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0045 Score=56.03 Aligned_cols=68 Identities=13% Similarity=0.123 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hhcC----C--ceee-ccCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LINM----G--ITPS-LKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~~~----~--i~~~-~~D~~~~~~~D~Vi~~a~ 151 (268)
|+||.|+|+|.+|..++..|... |. +|+.+++++++... +... + .+.. ..|.+.++++|+||.+++
T Consensus 2 ~~KI~VIGaG~vG~~ia~~la~~--~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGAGNVGATLAHLLALK--ELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEECCC
Confidence 68999999999999999999988 65 99999997765422 1111 1 1111 135567899999999987
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 80 ~p 81 (307)
T PRK06223 80 VP 81 (307)
T ss_pred CC
Confidence 43
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0032 Score=53.81 Aligned_cols=69 Identities=17% Similarity=0.138 Sum_probs=53.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c-----------ccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
.++|||||. --||..|++++.+. |.+|++..|++++.++... .++...++|. + .....+++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLEL--GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence 468999984 78999999999999 9999999999887766543 2444455553 1 24588999
Q ss_pred EEccCCCC
Q 024417 147 IFCAPPSR 154 (268)
Q Consensus 147 i~~a~~~~ 154 (268)
|++||...
T Consensus 83 iNNAGIqr 90 (245)
T COG3967 83 INNAGIQR 90 (245)
T ss_pred eecccccc
Confidence 99999654
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.00028 Score=63.38 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=50.5
Q ss_pred EEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 89 IVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 89 I~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|.+|..+++.|++. |++|++.+|++++.+.+...++... .++ +.++++|+||.|.++.
T Consensus 1 ~IGlG~mG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~-~s~~~~~~~advVil~vp~~ 63 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKA--GHPVRVFDLFPDAVEEAVAAGAQAA-ASPAEAAEGADRVITMLPAG 63 (288)
T ss_pred CCcccHhHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHcCCeec-CCHHHHHhcCCEEEEeCCCh
Confidence 469999999999999999 9999999999888777766665432 233 5788999999998864
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.00088 Score=60.16 Aligned_cols=68 Identities=21% Similarity=0.202 Sum_probs=49.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC------------Cce------------eeccCc-c
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM------------GIT------------PSLKWT-E 138 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~------------~i~------------~~~~D~-~ 138 (268)
+++|.|+|+|.+|..++..|... |++|++.+++++..+..... ... ....|. +
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~ 80 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFH--GFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAE 80 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHH
Confidence 46899999999999999999999 99999999987643332110 010 012343 3
Q ss_pred ccCCCCEEEEccCCC
Q 024417 139 ATQKFPYVIFCAPPS 153 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~ 153 (268)
+++++|.||.+.+..
T Consensus 81 a~~~aDlVieavpe~ 95 (287)
T PRK08293 81 AVKDADLVIEAVPED 95 (287)
T ss_pred HhcCCCEEEEeccCC
Confidence 678999999988743
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.012 Score=53.33 Aligned_cols=130 Identities=18% Similarity=0.222 Sum_probs=80.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----CCceeeccCc---c-----------c--cCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWT---E-----------A--TQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~~i~~~~~D~---~-----------~--~~~ 142 (268)
.+-|||||| --.|+.||++|.++ |+.|.+-.-+++..+.+.. ........|. + . -.+
T Consensus 29 ~k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 29 DKAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred CcEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 456999999 88899999999999 9999998877666555432 2233344442 1 1 134
Q ss_pred CCEEEEccCCCC---CCCh--HHHHHHH---------------H-HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSR---SLDY--PGDVRLA---------------A-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~---~~~~--~~~~~~~---------------~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
-=.|||+||... .++| .++.++. + +-+..-.|+|++||.. |.. + .|.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~--GR~---------~-~p~ 174 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL--GRV---------A-LPA 174 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc--cCc---------c-Ccc
Confidence 668999998432 2221 1222111 1 1233346999999864 221 1 111
Q ss_pred CCCHHHHHHHHHHHH-------HHHcC--ceEEEeC
Q 024417 202 GRSPRTDVLLKAEKV-------ILEFG--GCVLRLA 228 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~-------l~~~~--~tIlRp~ 228 (268)
..+|..+|.+.|.. +..+| +.++-||
T Consensus 175 -~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 175 -LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred -cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 25788888887753 44456 6888888
|
|
| >COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0025 Score=59.23 Aligned_cols=67 Identities=18% Similarity=0.292 Sum_probs=51.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-------------------cCccccCCCCE
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------------KWTEATQKFPY 145 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-------------------~D~~~~~~~D~ 145 (268)
++|-|+|.||||..++-.+..+ |++|+++|-++.+.+.+..-...... .|.+.+..||+
T Consensus 10 ~~I~ViGLGYVGLPlA~~fA~~--G~~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd~~~l~~~dv 87 (436)
T COG0677 10 ATIGVIGLGYVGLPLAAAFASA--GFKVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTDPEELKECDV 87 (436)
T ss_pred eEEEEEccccccHHHHHHHHHc--CCceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecChhhcccCCE
Confidence 6899999999999999999999 99999999988777665432211111 12235669999
Q ss_pred EEEccCCC
Q 024417 146 VIFCAPPS 153 (268)
Q Consensus 146 Vi~~a~~~ 153 (268)
++.|.+..
T Consensus 88 ~iI~VPTP 95 (436)
T COG0677 88 FIICVPTP 95 (436)
T ss_pred EEEEecCC
Confidence 99999753
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0095 Score=51.56 Aligned_cols=137 Identities=12% Similarity=0.008 Sum_probs=80.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCc-chhhhc-----CCceeeccCc--------------cc--
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADH-HDELIN-----MGITPSLKWT--------------EA-- 139 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~-~~~l~~-----~~i~~~~~D~--------------~~-- 139 (268)
++.|+|||+ --||.-|+++|++. +|.++++.+ |++++ ..+++. .++..+..|. +.
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg 81 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG 81 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence 456999998 88999999999975 588776554 55766 333322 2444444432 02
Q ss_pred cCCCCEEEEccCCCCC----CC-----hHHHH-----------HHHH--HHhc-----------CCCeEEEEccCeeecC
Q 024417 140 TQKFPYVIFCAPPSRS----LD-----YPGDV-----------RLAA--LSWN-----------GEGSFLFTSSSAIYDC 186 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~~-----~~~~~-----------~~~~--~~~~-----------gvkr~V~~SS~~vYg~ 186 (268)
..+.|.++++|+.... .. +.+.+ +..+ +++. +...+|++||..- .
T Consensus 82 ~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~--s 159 (249)
T KOG1611|consen 82 SDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAG--S 159 (249)
T ss_pred cCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccc--c
Confidence 4689999999984321 11 11111 1111 1111 1236898988652 1
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCcee
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLY 231 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vy 231 (268)
. . .....+. ..|..+|.+.-...++.. ++-+.||+|-
T Consensus 160 ~-----~-~~~~~~~--~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 160 I-----G-GFRPGGL--SAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred c-----C-CCCCcch--hhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 1 1 1111222 689999987766555442 5778999986
|
|
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0012 Score=58.73 Aligned_cols=66 Identities=20% Similarity=0.351 Sum_probs=49.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCCcchhhhcC--CceeeccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINM--GITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~~~~~l~~~--~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|+|+|.+|+.+++.|.+. | .+|.+.+|++++.+.+... ++... .|. +.+.++|+||.+..+.
T Consensus 1 m~I~iIG~G~mG~ala~~L~~~--g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~-~~~~~~~~~aDiVilav~p~ 73 (273)
T PRK07680 1 MNIGFIGTGNMGTILIEAFLES--GAVKPSQLTITNRTPAKAYHIKERYPGIHVA-KTIEEVISQSDLIFICVKPL 73 (273)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCcceEEEECCCHHHHHHHHHHcCCeEEE-CCHHHHHHhCCEEEEecCHH
Confidence 3799999999999999999988 7 3799999987666555432 44433 233 4578999999998654
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0057 Score=55.67 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=50.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchh----hhcC-----CceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~----l~~~-----~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|..++..|... | .+|..+++++++... +... .......|.+.++++|+||.+++..
T Consensus 1 mkI~IIGaG~VG~~~a~~l~~~--g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 1 MKVAIVGAGFVGSTTAYALLLR--GLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 4799999999999999999998 7 689999998765432 2211 1122224557899999999999864
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 79 ~ 79 (308)
T cd05292 79 Q 79 (308)
T ss_pred C
Confidence 3
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0012 Score=60.10 Aligned_cols=67 Identities=16% Similarity=0.292 Sum_probs=49.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc-cc-CCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-AT-QKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~-~~-~~~D~Vi~~a~~~ 153 (268)
++++|.|+|+|.+|..+++.|.+. |++|++.+++... ......++... .|.+ .+ .++|+||.|.++.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~--G~~V~~~d~~~~~-~~a~~~gv~~~-~~~~e~~~~~aDvVilavp~~ 103 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQ--GHTVLATSRSDYS-DIAAELGVSFF-RDPDDFCEEHPDVVLLCTSIL 103 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECccHH-HHHHHcCCeee-CCHHHHhhCCCCEEEEecCHH
Confidence 456899999999999999999998 9999999988532 22223455332 2332 33 4799999988865
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0019 Score=57.24 Aligned_cols=66 Identities=12% Similarity=0.056 Sum_probs=49.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec---cCcc----c--cCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWTE----A--TQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~---~D~~----~--~~~~D~Vi~~a~~~ 153 (268)
|+|||+|+ |. |+.|+++|.++ |++|++.++++...+.+...+...+. .|.+ . -.++|+||+++.|.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf 76 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPF 76 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH
Confidence 47999875 99 99999999999 99999999988766555554433333 2221 2 34799999998764
|
This enzyme was found to be a monomer by gel filtration. |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0015 Score=61.83 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=54.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
...++|+|+|+|.||+.+++.++.. |.+|+++++++.+.......|.+.... .+.+.++|+||.+.+.
T Consensus 200 l~GktVvViG~G~IG~~va~~ak~~--Ga~ViV~d~d~~R~~~A~~~G~~~~~~-~e~v~~aDVVI~atG~ 267 (413)
T cd00401 200 IAGKVAVVAGYGDVGKGCAQSLRGQ--GARVIVTEVDPICALQAAMEGYEVMTM-EEAVKEGDIFVTTTGN 267 (413)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEECChhhHHHHHhcCCEEccH-HHHHcCCCEEEECCCC
Confidence 3457999999999999999999999 999999999887766555567654422 2467889999988764
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0016 Score=60.24 Aligned_cols=35 Identities=23% Similarity=0.191 Sum_probs=29.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
+|+||+|+|+ |++|+.+++.|.+. |++++.++.++
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~-p~~elv~v~~~ 36 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNH-PEVEIVAVTSR 36 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcC-CCceEEEEECc
Confidence 3679999997 99999999999865 78998887664
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00085 Score=54.01 Aligned_cols=64 Identities=20% Similarity=0.312 Sum_probs=48.4
Q ss_pred EEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC-------------c-cccCCCCEEEEccCC
Q 024417 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-------------T-EATQKFPYVIFCAPP 152 (268)
Q Consensus 87 VLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D-------------~-~~~~~~D~Vi~~a~~ 152 (268)
|+|+|+|-||..++.+|.+. |++|..++|.. +.+.+...++.....+ . +....+|+||.|...
T Consensus 1 I~I~G~GaiG~~~a~~L~~~--g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQA--GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHT--TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEECcCHHHHHHHHHHHHC--CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 78999999999999999998 99999999987 6665655555443222 0 145789999988765
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 78 ~ 78 (151)
T PF02558_consen 78 Y 78 (151)
T ss_dssp G
T ss_pred c
Confidence 4
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0032 Score=57.24 Aligned_cols=67 Identities=12% Similarity=0.170 Sum_probs=48.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--c-----------CccccCCCCEEEEcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--K-----------WTEATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~-----------D~~~~~~~D~Vi~~a 150 (268)
+|+|+|+|+|-||..++..|.+. |++|+.+.|++. +.+...++.... + +.+....+|+||.+.
T Consensus 5 ~m~I~IiG~GaiG~~lA~~L~~~--g~~V~~~~r~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 80 (313)
T PRK06249 5 TPRIGIIGTGAIGGFYGAMLARA--GFDVHFLLRSDY--EAVRENGLQVDSVHGDFHLPPVQAYRSAEDMPPCDWVLVGL 80 (313)
T ss_pred CcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeCCH--HHHHhCCeEEEeCCCCeeecCceEEcchhhcCCCCEEEEEe
Confidence 46899999999999999999999 999999999752 334333433211 1 113456789999887
Q ss_pred CCCC
Q 024417 151 PPSR 154 (268)
Q Consensus 151 ~~~~ 154 (268)
....
T Consensus 81 K~~~ 84 (313)
T PRK06249 81 KTTA 84 (313)
T ss_pred cCCC
Confidence 6543
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.00033 Score=57.31 Aligned_cols=67 Identities=16% Similarity=0.260 Sum_probs=48.5
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee-------------eccCc-cccCCCCEEEEccC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------------SLKWT-EATQKFPYVIFCAP 151 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~-------------~~~D~-~~~~~~D~Vi~~a~ 151 (268)
||.|+|+|-.|..++..|.++ |++|+...|+++..+.+...+... ...|+ ++++++|+||.+.+
T Consensus 1 KI~ViGaG~~G~AlA~~la~~--g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADN--GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHC--TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEECcCHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence 689999999999999999999 999999999876655554322111 12344 47899999998777
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 79 s~~ 81 (157)
T PF01210_consen 79 SQA 81 (157)
T ss_dssp GGG
T ss_pred HHH
Confidence 654
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0014 Score=58.86 Aligned_cols=68 Identities=21% Similarity=0.256 Sum_probs=48.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh--hcCCceeec-cC--ccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL--INMGITPSL-KW--TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l--~~~~i~~~~-~D--~~~~~~~D~Vi~~a~~~ 153 (268)
+++|+|+|.|.||+.+++.|.++ |+.|.++.++....... ...++.... .+ .+...++|+||.+.+..
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~--g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~ 75 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEA--GLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIE 75 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHc--CCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHH
Confidence 57899999999999999999999 99887777665432221 123332221 12 24677899999998754
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0013 Score=59.38 Aligned_cols=65 Identities=22% Similarity=0.333 Sum_probs=49.6
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+|.|+|.|.+|..+++.|++. |++|++.+|++. .+.+...++.......+..+++|+||.|.+..
T Consensus 2 ~Ig~IGlG~MG~~ma~~L~~~--G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~ 66 (292)
T PRK15059 2 KLGFIGLGIMGTPMAINLARA--GHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDT 66 (292)
T ss_pred eEEEEccCHHHHHHHHHHHHC--CCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence 799999999999999999999 999999998764 34444455543322224678999999887753
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0033 Score=58.02 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=31.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~ 119 (268)
++.++|+|+|+|-+|+++++.|... |+ +++.+|++.
T Consensus 22 L~~~~VlIiG~GglGs~va~~La~a--Gvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGAGALGAANAEALVRA--GIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence 4457899999999999999999999 98 888888863
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0021 Score=55.62 Aligned_cols=126 Identities=16% Similarity=0.064 Sum_probs=79.8
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc----hhhh-cCCceeeccCc--------------ccc-CCCCEEEEccCC
Q 024417 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELI-NMGITPSLKWT--------------EAT-QKFPYVIFCAPP 152 (268)
Q Consensus 93 G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~----~~l~-~~~i~~~~~D~--------------~~~-~~~D~Vi~~a~~ 152 (268)
+-||+.++++|+++ |++|++++|+.++. +.+. +.+.+.+.+|. +.. ...|++||+++.
T Consensus 6 ~GiG~aia~~l~~~--Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEE--GANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHT--TEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 68999999999999 99999999987752 2332 23455566664 135 789999999976
Q ss_pred CCC----CCh----HHHHHHH---------------HHHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 153 SRS----LDY----PGDVRLA---------------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 153 ~~~----~~~----~~~~~~~---------------~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
... .++ .+.+.+. +........+|++||...... .... ..|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~-----------~~~~--~~y~~s 150 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRP-----------MPGY--SAYSAS 150 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSB-----------STTT--HHHHHH
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhccc-----------Cccc--hhhHHH
Confidence 442 211 1111111 001112267999998653221 1112 479999
Q ss_pred HHHHHHHHHHc--------C--ceEEEeCceecC
Q 024417 210 LLKAEKVILEF--------G--GCVLRLAGLYKA 233 (268)
Q Consensus 210 K~~aE~~l~~~--------~--~tIlRp~~vyG~ 233 (268)
|...|.+.+.+ + ...+.||.+..+
T Consensus 151 Kaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~ 184 (241)
T PF13561_consen 151 KAALEGLTRSLAKELAPKKGIRVNAVSPGPIETP 184 (241)
T ss_dssp HHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSH
T ss_pred HHHHHHHHHHHHHHhccccCeeeeeecccceecc
Confidence 99888776643 3 467788888744
|
... |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0025 Score=60.85 Aligned_cols=66 Identities=20% Similarity=0.330 Sum_probs=49.7
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh-hcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-INMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l-~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|+| +|.+|..+++.|.+. |++|++.+|+++....+ ...++.. ..|. +.+.++|+||.|.++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~--G~~V~v~~r~~~~~~~~a~~~gv~~-~~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK--GFEVIVTGRDPKKGKEVAKELGVEY-ANDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHcCCee-ccCHHHHhccCCEEEEecCHH
Confidence 4799997 699999999999999 99999999987654332 2335432 2233 4678999999988764
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0031 Score=57.77 Aligned_cols=68 Identities=13% Similarity=0.170 Sum_probs=49.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----------cCCce--------eeccCc-cccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----------NMGIT--------PSLKWT-EATQKF 143 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----------~~~i~--------~~~~D~-~~~~~~ 143 (268)
.++|.|+|+|.+|+.++..++.. |++|+..+++++..+... +.+.. ....|. +++.++
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~a--G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAH--GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 46899999999999999999999 999999999876433211 11110 011233 467999
Q ss_pred CEEEEccCCC
Q 024417 144 PYVIFCAPPS 153 (268)
Q Consensus 144 D~Vi~~a~~~ 153 (268)
|.|+-++...
T Consensus 85 DlViEavpE~ 94 (321)
T PRK07066 85 DFIQESAPER 94 (321)
T ss_pred CEEEECCcCC
Confidence 9999987654
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.002 Score=60.43 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=51.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|-||+.+++.|+.- |.+|++.+|.....+.....+++.. .++ +.++.+|+|+.+.+.+.
T Consensus 190 L~gktVGIvG~G~IG~~vA~~l~~f--G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~lPlt~ 260 (385)
T PRK07574 190 LEGMTVGIVGAGRIGLAVLRRLKPF--DVKLHYTDRHRLPEEVEQELGLTYH-VSFDSLVSVCDVVTIHCPLHP 260 (385)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCCchhhHhhcCceec-CCHHHHhhcCCEEEEcCCCCH
Confidence 4457899999999999999999998 9999999997533222222344322 233 57899999998887653
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0092 Score=54.59 Aligned_cols=70 Identities=19% Similarity=0.179 Sum_probs=50.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchh--h--hc----CC--ceee-ccCccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDE--L--IN----MG--ITPS-LKWTEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~--l--~~----~~--i~~~-~~D~~~~~~~D~Vi~~a 150 (268)
+.+||.|+|+|.+|..++..|... | .+|..+|++++.... + .. .+ .+.. ..|.+.++++|+||.++
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~--~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQK--NLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC--CCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCCCEEEECC
Confidence 346999999999999999999888 7 689999998754321 1 10 11 1222 24667889999999999
Q ss_pred CCCC
Q 024417 151 PPSR 154 (268)
Q Consensus 151 ~~~~ 154 (268)
+...
T Consensus 82 g~~~ 85 (319)
T PTZ00117 82 GVQR 85 (319)
T ss_pred CCCC
Confidence 7643
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0016 Score=58.00 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=49.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC----C-ceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----G-ITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~----~-i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
.++++|+|+|-+|+.++..|.+. |++|++..|+.++.+.+.+. + +.....+.....++|+||++.+..
T Consensus 117 ~k~vliiGaGg~g~aia~~L~~~--g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~g 189 (270)
T TIGR00507 117 NQRVLIIGAGGAARAVALPLLKA--DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAG 189 (270)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCC
Confidence 46899999999999999999999 99999999987665544321 2 112212222346899999998864
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0035 Score=57.12 Aligned_cols=70 Identities=21% Similarity=0.280 Sum_probs=51.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc-CCceeecc-Cc-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~-~~i~~~~~-D~-~~~~~~D~Vi~~a~~~~ 154 (268)
..++|+|+|+|.+|+.+++.|... | .+|++++|++++...+.. .+...... |. +.+.++|+||.+.+...
T Consensus 177 ~~~~V~ViGaG~iG~~~a~~L~~~--g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~ 250 (311)
T cd05213 177 KGKKVLVIGAGEMGELAAKHLAAK--GVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPH 250 (311)
T ss_pred cCCEEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCc
Confidence 357899999999999999999886 5 689999998776554432 34433322 22 45788999999988654
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0018 Score=61.32 Aligned_cols=68 Identities=13% Similarity=0.110 Sum_probs=51.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
+..++|+|+|+|.||+.+++.|+.. |.+|++.++++.+.......|.+.... .+.++++|+||.+.+.
T Consensus 210 l~Gk~VlViG~G~IG~~vA~~lr~~--Ga~ViV~d~dp~ra~~A~~~G~~v~~l-~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 210 IAGKVVVVAGYGDVGKGCAQRLRGL--GARVIVTEVDPICALQAAMDGFRVMTM-EEAAELGDIFVTATGN 277 (425)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCchhhHHHHhcCCEecCH-HHHHhCCCEEEECCCC
Confidence 3457899999999999999999999 999999999876654333345543211 1467789999987653
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0015 Score=53.71 Aligned_cols=70 Identities=13% Similarity=0.133 Sum_probs=46.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
+..++++|+|.|.+|+.+++.|+.. |.+|++.+.+|-+.-+....|.+....+ +++..+|++|-+.+...
T Consensus 21 l~Gk~vvV~GYG~vG~g~A~~lr~~--Ga~V~V~e~DPi~alqA~~dGf~v~~~~-~a~~~adi~vtaTG~~~ 90 (162)
T PF00670_consen 21 LAGKRVVVIGYGKVGKGIARALRGL--GARVTVTEIDPIRALQAAMDGFEVMTLE-EALRDADIFVTATGNKD 90 (162)
T ss_dssp -TTSEEEEE--SHHHHHHHHHHHHT--T-EEEEE-SSHHHHHHHHHTT-EEE-HH-HHTTT-SEEEE-SSSSS
T ss_pred eCCCEEEEeCCCcccHHHHHHHhhC--CCEEEEEECChHHHHHhhhcCcEecCHH-HHHhhCCEEEECCCCcc
Confidence 3457899999999999999999999 9999999998755433333566654322 57889998887777643
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0036 Score=57.37 Aligned_cols=69 Identities=14% Similarity=0.066 Sum_probs=50.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch--hhh------cCC--ceeec-cCccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD--ELI------NMG--ITPSL-KWTEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~--~l~------~~~--i~~~~-~D~~~~~~~D~Vi~~a 150 (268)
+++||.|+|+|.+|..++..++.. |. +|..++++++... .+. ..+ .+... .|.+.++++|+||.++
T Consensus 5 ~~~KI~IIGaG~vG~~ia~~la~~--gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~~aDiVI~ta 82 (321)
T PTZ00082 5 KRRKISLIGSGNIGGVMAYLIVLK--NLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIAGSDVVIVTA 82 (321)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhCCCCEEEECC
Confidence 356999999999999999999888 85 8999999876432 110 011 22222 5667899999999999
Q ss_pred CCC
Q 024417 151 PPS 153 (268)
Q Consensus 151 ~~~ 153 (268)
+..
T Consensus 83 g~~ 85 (321)
T PTZ00082 83 GLT 85 (321)
T ss_pred CCC
Confidence 753
|
|
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0015 Score=58.55 Aligned_cols=68 Identities=15% Similarity=0.245 Sum_probs=48.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCCc-chhhhcC--CceeeccCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADH-HDELINM--GITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~~-~~~l~~~--~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
|++|.|+|+|.+|..+++.|.+. | ++|++.+|+.+. .+.+... ++.. ..|. +...++|+||.|..+..
T Consensus 1 m~~I~iIG~G~mG~ala~~L~~~--g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~-~~~~~e~~~~aDvVilavpp~~ 76 (277)
T PRK06928 1 MEKIGFIGYGSMADMIATKLLET--EVATPEEIILYSSSKNEHFNQLYDKYPTVEL-ADNEAEIFTKCDHSFICVPPLA 76 (277)
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCCcccEEEEeCCcHHHHHHHHHHcCCeEE-eCCHHHHHhhCCEEEEecCHHH
Confidence 67899999999999999999988 7 789999986432 3333221 1221 2333 46789999998888753
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0046 Score=57.05 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=31.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~ 118 (268)
+...+|+|+|+|.+|+++++.|... |. +++.+|.+
T Consensus 22 L~~~~VlVvG~GglGs~va~~La~a--Gvg~i~lvD~D 57 (339)
T PRK07688 22 LREKHVLIIGAGALGTANAEMLVRA--GVGKVTIVDRD 57 (339)
T ss_pred hcCCcEEEECCCHHHHHHHHHHHHc--CCCeEEEEeCC
Confidence 4457899999999999999999999 98 89999886
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0015 Score=68.02 Aligned_cols=71 Identities=18% Similarity=0.163 Sum_probs=51.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCe-------------EEEEeCCCCcchhhhc--CCceeecc---Ccc----c
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQ-------------IYGQTMTADHHDELIN--MGITPSLK---WTE----A 139 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~-------------V~~~~R~~~~~~~l~~--~~i~~~~~---D~~----~ 139 (268)
.+|++|+|+|+|++|+..++.|.+. ++++ |++.+++.++.+.+.. .+++.+.. |.+ .
T Consensus 567 ~~~~rIlVLGAG~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~ 645 (1042)
T PLN02819 567 KKSQNVLILGAGRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY 645 (1042)
T ss_pred ccCCcEEEECCCHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence 3578999999999999999999875 4555 7788887766655433 14444444 332 3
Q ss_pred cCCCCEEEEccCCC
Q 024417 140 TQKFPYVIFCAPPS 153 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (268)
+.++|+||.|.++.
T Consensus 646 v~~~DaVIsalP~~ 659 (1042)
T PLN02819 646 VSQVDVVISLLPAS 659 (1042)
T ss_pred hcCCCEEEECCCch
Confidence 47899999999874
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0044 Score=51.72 Aligned_cols=99 Identities=20% Similarity=0.127 Sum_probs=54.4
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCC-Cc------chhhhcCCcee--eccCc---c-----------cc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTA-DH------HDELINMGITP--SLKWT---E-----------AT 140 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~-~~------~~~l~~~~i~~--~~~D~---~-----------~~ 140 (268)
.+||+|. |-||..+++.|.++ +. +|+.+.|+. .. .++++..+.+. ..+|. + ..
T Consensus 2 tylitGG~gglg~~la~~La~~--~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAER--GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHc--CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 5789985 99999999999998 54 888999982 11 12344445443 34443 1 12
Q ss_pred CCCCEEEEccCCCCCC---C-----h-------HHHHHHHH--HHhcCCCeEEEEccCe-eecC
Q 024417 141 QKFPYVIFCAPPSRSL---D-----Y-------PGDVRLAA--LSWNGEGSFLFTSSSA-IYDC 186 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~-------~~~~~~~~--~~~~gvkr~V~~SS~~-vYg~ 186 (268)
..++.|||+++..... + + +.++.++. ......+.||.+||.. ++|.
T Consensus 80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~ 143 (181)
T PF08659_consen 80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG 143 (181)
T ss_dssp S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-
T ss_pred CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC
Confidence 4778999999865321 1 1 11222222 1234678999999875 5664
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0022 Score=57.41 Aligned_cols=70 Identities=21% Similarity=0.230 Sum_probs=51.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcC-C----ceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-G----ITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~-~----i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++++|+|+|-+|+.++..|.+. | .+|+++.|+.++.+.+... + +.. ..+. +.+.++|+||++.+...
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~--g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDL--GVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhccccCCEEEECCcCCC
Confidence 3457899999999999999999999 9 6999999997776554321 1 111 1122 45688999999987543
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0018 Score=57.67 Aligned_cols=69 Identities=17% Similarity=0.238 Sum_probs=46.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE-EEeCCCCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIY-GQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~-~~~R~~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+||.|+|+|.+|+.+++.|.+..+++++. +.+|++++.+.+.+ .+... ..|. +.+.++|+|+.|+++.
T Consensus 1 mmrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~-~~~~~ell~~~DvVvi~a~~~ 72 (265)
T PRK13304 1 MLKIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA-CLSIDELVEDVDLVVECASVN 72 (265)
T ss_pred CCEEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee-ECCHHHHhcCCCEEEEcCChH
Confidence 569999999999999999998762246655 45666655444332 23322 2333 3458999999998764
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0043 Score=59.73 Aligned_cols=69 Identities=19% Similarity=0.204 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC----Cceee-ccCc-cc---cCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPS-LKWT-EA---TQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~----~i~~~-~~D~-~~---~~~~D~Vi~~a~~~~ 154 (268)
|.+|.|+|.|..|..+++.|+++ |++|++.+|++++.+.+.+. +.... ..++ +. ++++|+|+.++.+..
T Consensus 1 ~~~IgvIGLG~MG~~lA~nL~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~ 78 (470)
T PTZ00142 1 MSDIGLIGLAVMGQNLALNIASR--GFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGE 78 (470)
T ss_pred CCEEEEEeEhHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChH
Confidence 56899999999999999999999 99999999998887665432 32211 1233 23 346899998877653
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0024 Score=60.22 Aligned_cols=68 Identities=16% Similarity=0.118 Sum_probs=51.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
...++|+|+|+|.||+.+++.++.. |.+|+++++++.+.......|...... .+.++++|+||.+.+.
T Consensus 193 l~Gk~VvViG~G~IG~~vA~~ak~~--Ga~ViV~d~dp~r~~~A~~~G~~v~~l-eeal~~aDVVItaTG~ 260 (406)
T TIGR00936 193 IAGKTVVVAGYGWCGKGIAMRARGM--GARVIVTEVDPIRALEAAMDGFRVMTM-EEAAKIGDIFITATGN 260 (406)
T ss_pred CCcCEEEEECCCHHHHHHHHHHhhC--cCEEEEEeCChhhHHHHHhcCCEeCCH-HHHHhcCCEEEECCCC
Confidence 4467999999999999999999999 999999999876644433445543322 2467788998876653
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0026 Score=58.06 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=51.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+..++|.|+|.|-+|+.+++.|++. |++|++.+|.....+.....|++.. +. ++++.+|+|+.+.+.
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~--G~~ViV~~r~~~s~~~A~~~G~~v~--sl~Eaak~ADVV~llLPd 81 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDS--GVEVVVGVRPGKSFEVAKADGFEVM--SVSEAVRTAQVVQMLLPD 81 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHC--cCEEEEEECcchhhHHHHHcCCEEC--CHHHHHhcCCEEEEeCCC
Confidence 3457899999999999999999999 9999998775333333333465432 44 578999999988884
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0019 Score=57.66 Aligned_cols=70 Identities=21% Similarity=0.335 Sum_probs=48.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
++||.|+|+|.||+.+++.|.+..++++|.++ +|++++.+.+.. .+......|. +.+.++|+|+.|++..
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~ 78 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPAS 78 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcH
Confidence 46899999999999999999863348888754 666655444322 2322222333 3567899999998864
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.012 Score=53.60 Aligned_cols=67 Identities=16% Similarity=0.134 Sum_probs=47.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCC--Ccchh----hh----cCC--ceeec-cCccccCCCCEEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTA--DHHDE----LI----NMG--ITPSL-KWTEATQKFPYVIF 148 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~--~~~~~----l~----~~~--i~~~~-~D~~~~~~~D~Vi~ 148 (268)
|||.|+|+ |.+|..++..|... |+ +|+.++|++ ++... +. ..+ .+... .|.+.+.++|+||.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~--g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKE--DVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCEEEE
Confidence 58999997 99999999999998 76 599999954 32211 11 111 12211 35567999999999
Q ss_pred ccCCC
Q 024417 149 CAPPS 153 (268)
Q Consensus 149 ~a~~~ 153 (268)
+++..
T Consensus 79 tag~p 83 (309)
T cd05294 79 TAGVP 83 (309)
T ss_pred ecCCC
Confidence 99853
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0043 Score=56.49 Aligned_cols=67 Identities=19% Similarity=0.251 Sum_probs=50.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc------------CccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK------------WTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~------------D~~~~~~~D~Vi~~a~~ 152 (268)
|||+|+|+|-+|..++..|.+. |++|+.+.|.+. .+.+.+.|...... +.+....+|.||.+.-.
T Consensus 1 mkI~IlGaGAvG~l~g~~L~~~--g~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa 77 (307)
T COG1893 1 MKILILGAGAIGSLLGARLAKA--GHDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKA 77 (307)
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecc
Confidence 5899999999999999999999 899999999764 55565555544321 12356789999988765
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 78 ~q 79 (307)
T COG1893 78 YQ 79 (307)
T ss_pred cc
Confidence 43
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0033 Score=57.83 Aligned_cols=68 Identities=21% Similarity=0.226 Sum_probs=51.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|..- |.+|++.+|...... ....++.. .+. +.++++|+|+.+.+.+.
T Consensus 148 L~gktvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~-~~~~~~~~--~~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 148 VYGKTIGIIGFGRIGQAVARRAKGF--GMRILYYSRTRKPEA-EKELGAEY--RPLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCChhh-HHHcCCEe--cCHHHHHhhCCEEEEeCCCCh
Confidence 4568999999999999999999998 999999998754321 12223322 233 47889999999887654
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.002 Score=63.91 Aligned_cols=67 Identities=13% Similarity=0.163 Sum_probs=57.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~ 152 (268)
.++|+|.|.|.+|+.+++.|.++ |+++++++.++++.+.+++.|...+.+|. + -++++|.||-+...
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMAN--KMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC
Confidence 36899999999999999999999 99999999999988888888888888885 1 36789988876654
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0018 Score=59.68 Aligned_cols=64 Identities=16% Similarity=0.199 Sum_probs=39.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeE---EEEeCCCCcchhhhcCCceeeccCc--cccCCCCEEEEccC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQI---YGQTMTADHHDELINMGITPSLKWT--EATQKFPYVIFCAP 151 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V---~~~~R~~~~~~~l~~~~i~~~~~D~--~~~~~~D~Vi~~a~ 151 (268)
+|+|+|+ |++|+.|++.|.++ +|.+ ..+.+.....+.+...+.+....|. +.+.++|+||.+++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~--~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~~~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEER--NFPIDKLVLLASDRSAGRKVTFKGKELEVNEAKIESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhC--CCChhhEEEEeccccCCCeeeeCCeeEEEEeCChHHhcCCCEEEECCC
Confidence 5889997 99999999999887 6654 4444554333333222333333332 23466777776665
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0015 Score=70.20 Aligned_cols=68 Identities=12% Similarity=0.142 Sum_probs=55.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
++++|-++|.|.+|..+++.|++. |++|++.+|++++.+.+...+.... .++ +..+++|+||.|.+..
T Consensus 323 ~~~~IGfIGlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~Ga~~~-~s~~e~~~~aDvVi~~V~~~ 391 (1378)
T PLN02858 323 PVKRIGFIGLGAMGFGMASHLLKS--NFSVCGYDVYKPTLVRFENAGGLAG-NSPAEVAKDVDVLVIMVANE 391 (1378)
T ss_pred CCCeEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeec-CCHHHHHhcCCEEEEecCCh
Confidence 357899999999999999999999 9999999999887777666665432 233 5778999999988743
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.017 Score=52.55 Aligned_cols=67 Identities=12% Similarity=0.132 Sum_probs=47.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch-h-h--hcC------Cceee-ccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD-E-L--INM------GITPS-LKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~-~-l--~~~------~i~~~-~~D~~~~~~~D~Vi~~a~~ 152 (268)
+||.|+|+|++|..++..|... |+ +|+.++..++... . + ... ..... ..|.+.+.++|+||.+++.
T Consensus 2 ~KV~VIGaG~vG~~iA~~la~~--g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGFVGATTAFRLAEK--ELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYADTANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHHhCCCCEEEEcCCC
Confidence 4899999999999999999998 76 8999998654322 1 1 000 11111 2455568999999999985
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 80 p 80 (305)
T TIGR01763 80 P 80 (305)
T ss_pred C
Confidence 3
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0087 Score=54.87 Aligned_cols=69 Identities=16% Similarity=0.153 Sum_probs=46.6
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcC-----CCCeEEEEeCCC--Ccchh----hhcC------CceeeccCccccCCCCEEE
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEH-----PGCQIYGQTMTA--DHHDE----LINM------GITPSLKWTEATQKFPYVI 147 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~-----~G~~V~~~~R~~--~~~~~----l~~~------~i~~~~~D~~~~~~~D~Vi 147 (268)
||.|+|+ |.||+.++..|.... ..++++.+++++ +..+. +... +.+....+.+.++++|+||
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiVV 81 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDVAI 81 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCEEE
Confidence 7999998 999999999998750 023588999876 43221 1111 1211123447899999999
Q ss_pred EccCCCC
Q 024417 148 FCAPPSR 154 (268)
Q Consensus 148 ~~a~~~~ 154 (268)
|+|+...
T Consensus 82 itAG~~~ 88 (323)
T cd00704 82 LVGAFPR 88 (323)
T ss_pred EeCCCCC
Confidence 9999644
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0033 Score=57.02 Aligned_cols=53 Identities=11% Similarity=0.114 Sum_probs=41.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
.|+|.|+|+|.+|+.+++.|.+. ||+|++.+|++.. ++ +.++++|+||.+.+.
T Consensus 4 ~m~I~iiG~G~~G~~lA~~l~~~--G~~V~~~~r~~~~--------------~~~~~~~~advvi~~vp~ 57 (308)
T PRK14619 4 PKTIAILGAGAWGSTLAGLASAN--GHRVRVWSRRSGL--------------SLAAVLADADVIVSAVSM 57 (308)
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCEEEEEeCCCCC--------------CHHHHHhcCCEEEEECCh
Confidence 35899999999999999999999 9999999997531 11 245567777776664
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0037 Score=58.66 Aligned_cols=70 Identities=16% Similarity=0.201 Sum_probs=51.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
....++|.|+|.|.||+.+++.|..- |.+|++.+|.....+.....++... .++ +.+.++|+|+.+.+.+
T Consensus 196 ~L~gktVGIVG~G~IG~~vA~~L~af--G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 196 DLEGKTVGTVGAGRIGRLLLQRLKPF--NCNLLYHDRLKMDPELEKETGAKFE-EDLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCCEEEEEeecHHHHHHHHHHHHC--CCEEEEECCCCcchhhHhhcCceec-CCHHHHHhhCCEEEEeCCCC
Confidence 34567999999999999999999998 9999999987533222223344332 234 4678999999887754
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0025 Score=59.24 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=48.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee---ccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS---LKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~---~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
++|.|+|+|.+|..+++.|++. |++|.+.++++++.......+.... ..|. +.++++|+||.|.++.
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~--G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~ 71 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAA--GPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVD 71 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhc--CCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHH
Confidence 3799999999999999999999 9999999887765433222222111 1122 3578999999998875
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0022 Score=63.85 Aligned_cols=67 Identities=18% Similarity=0.252 Sum_probs=57.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~ 152 (268)
.++|+|.|.|-+|+.+++.|.++ |+++++++.++++.+.+++.|.+.+.+|. + -++++|.||.+...
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSS--GVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCC
Confidence 36899999999999999999999 99999999999988888888888888885 2 35688988876643
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.003 Score=63.31 Aligned_cols=67 Identities=16% Similarity=0.331 Sum_probs=49.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccC-CCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQ-KFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~-~~D~Vi~~a~~~ 153 (268)
++++|.|+|.|.+|+.+++.|.+. |++|++.+|+... +.....|+.. ..|. +.+. .+|+||.|.++.
T Consensus 368 ~~~kIgIIGlG~mG~slA~~L~~~--G~~V~~~dr~~~~-~~a~~~Gv~~-~~~~~el~~~~aDvVILavP~~ 436 (667)
T PLN02712 368 SKLKIAIVGFGNFGQFLAKTMVKQ--GHTVLAYSRSDYS-DEAQKLGVSY-FSDADDLCEEHPEVILLCTSIL 436 (667)
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC--cCEEEEEECChHH-HHHHHcCCeE-eCCHHHHHhcCCCEEEECCChH
Confidence 457899999999999999999998 9999999997542 3333345542 2333 2343 589999998864
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.035 Score=50.28 Aligned_cols=34 Identities=24% Similarity=0.228 Sum_probs=29.3
Q ss_pred CCCeEEEEccc---HHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 83 GENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 83 ~m~kVLI~GaG---~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
..|.+||||+| -||+.++++|.++ |++|++.++.
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~ 43 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWV 43 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEecc
Confidence 35789999985 8999999999999 9999987643
|
|
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0034 Score=57.34 Aligned_cols=67 Identities=16% Similarity=0.188 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC-CcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
.++|.|+|+|.+|..+++.|++. |++|++..+.. +..+.+...|++.. ...++++++|+|+.+.++.
T Consensus 3 ~kkIgiIG~G~mG~AiA~~L~~s--G~~Viv~~~~~~~~~~~a~~~Gv~~~-s~~ea~~~ADiVvLaVpp~ 70 (314)
T TIGR00465 3 GKTVAIIGYGSQGHAQALNLRDS--GLNVIVGLRKGGASWKKATEDGFKVG-TVEEAIPQADLIMNLLPDE 70 (314)
T ss_pred cCEEEEEeEcHHHHHHHHHHHHC--CCeEEEEECcChhhHHHHHHCCCEEC-CHHHHHhcCCEEEEeCCcH
Confidence 46899999999999999999999 99887655543 33444444566532 1235678999999999876
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0037 Score=55.38 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=45.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhhcCCceeeccCcc-ccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINMGITPSLKWTE-ATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~~~i~~~~~D~~-~~~~~D~Vi~~a~~~ 153 (268)
|+||.|+|+ |.+|+.+++.+.+. +++++.++ ++++++.......++. ...|.+ .+.++|+||++..|.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~~~~~~~~~~~i~-~~~dl~~ll~~~DvVid~t~p~ 71 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPGSPLVGQGALGVA-ITDDLEAVLADADVLIDFTTPE 71 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccccccCCCCcc-ccCCHHHhccCCCEEEECCCHH
Confidence 469999998 99999999988764 47888874 5555443222112221 223443 456899999888764
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0044 Score=57.13 Aligned_cols=69 Identities=13% Similarity=0.138 Sum_probs=40.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCCCcchhhhcCCceeec--cCccccCCCCEEEEccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSL--KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~~~~~~~D~Vi~~a~ 151 (268)
+|++|.|+|+ |++|+.|++.|.++ +|..++..+......-+.+...+.+... .+.+.+.++|+||.+++
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~~~l~~~~~~~~~~~~vD~vFla~p 75 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAGKNLRVREVDSFDFSQVQLAFFAAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCCcceEEeeCChHHhcCCCEEEEcCC
Confidence 3579999997 99999999999975 3455666665432211112111211111 12223467887777665
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0039 Score=57.30 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=49.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|+|.||+.+++.|... |++|++.+|+++.... .++ ...+. +.++++|+|+.+.+...
T Consensus 143 ~l~g~~VgIIG~G~IG~~vA~~L~~~--G~~V~~~d~~~~~~~~----~~~-~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 143 PVKNMTVAIIGTGRIGAATAKIYAGF--GATITAYDAYPNKDLD----FLT-YKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCChhHhhh----hhh-ccCCHHHHHhcCCEEEEeCCCcH
Confidence 34556899999999999999999998 9999999997643221 111 11233 47889999998887653
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0015 Score=57.69 Aligned_cols=66 Identities=12% Similarity=0.136 Sum_probs=47.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCe---EEEEeCCCCcchhhhcC--CceeeccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ---IYGQTMTADHHDELINM--GITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~---V~~~~R~~~~~~~l~~~--~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|+|+|.+|+.+++.|++. |++ |.+.+|++++.+.+... +++.. .|. +.++++|+||.+..+.
T Consensus 1 m~IgiIG~G~mG~aia~~L~~~--g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~aDvVilav~p~ 72 (258)
T PRK06476 1 MKIGFIGTGAITEAMVTGLLTS--PADVSEIIVSPRNAQIAARLAERFPKVRIA-KDNQAVVDRSDVVFLAVRPQ 72 (258)
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCChheEEEECCCHHHHHHHHHHcCCceEe-CCHHHHHHhCCEEEEEeCHH
Confidence 3799999999999999999988 754 46677877665555432 33332 233 4567899999998864
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0099 Score=54.91 Aligned_cols=91 Identities=15% Similarity=0.160 Sum_probs=55.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchhhhc-CCce----------------e-eccCc-cccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELIN-MGIT----------------P-SLKWT-EATQKF 143 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~l~~-~~i~----------------~-~~~D~-~~~~~~ 143 (268)
|.||.|.|+|.||+.+++.+.++ |+.+|.++.. +++....+.. .|.. . +..+. +.+.++
T Consensus 1 ~ikVaI~G~GrIGr~va~al~~~-~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGYGTIGKRVADAVAAQ-PDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECCCHHHHHHHHHHhcC-CCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 56999999999999999988775 6899998764 2221111111 1111 1 11222 345789
Q ss_pred CEEEEccCCCCCCChHHHHHHHHHHhcCCCeEEEEccC
Q 024417 144 PYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSS 181 (268)
Q Consensus 144 D~Vi~~a~~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~ 181 (268)
|+|+.|.++.... ...... .+.| +++|+.++.
T Consensus 80 DVVIdaT~~~~~~----e~a~~~-~~aG-k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGGVGA----KNKELY-EKAG-VKAIFQGGE 111 (341)
T ss_pred CEEEECCCchhhH----HHHHHH-HHCC-CEEEEcCCC
Confidence 9999998775321 122221 3456 778887763
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0028 Score=55.21 Aligned_cols=68 Identities=13% Similarity=0.285 Sum_probs=47.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC---Ce-EEEEeCC-CCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG---CQ-IYGQTMT-ADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G---~~-V~~~~R~-~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
++||.|+|+|.+|+.+++.|++. + .+ |++..|+ +++.+.+.. .++... .|. +.++++|+||.+.++..
T Consensus 4 ~~kI~iIG~G~mg~ala~~l~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~DiViiavp~~~ 78 (245)
T PRK07634 4 KHRILFIGAGRMAEAIFSGLLKT--SKEYIEEIIVSNRSNVEKLDQLQARYNVSTT-TDWKQHVTSVDTIVLAMPPSA 78 (245)
T ss_pred CCeEEEECcCHHHHHHHHHHHhC--CCCCcCeEEEECCCCHHHHHHHHHHcCcEEe-CChHHHHhcCCEEEEecCHHH
Confidence 45899999999999999999887 5 23 6677764 444444433 355433 333 46789999999988753
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0061 Score=57.91 Aligned_cols=69 Identities=25% Similarity=0.335 Sum_probs=51.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhc-CCceeec-cCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPSL-KWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~-~~i~~~~-~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|-+|+.+++.|... |. +|++..|++++...+.. .+.+... .|. +.+.++|+||.+.+...
T Consensus 182 ~~~vlViGaG~iG~~~a~~L~~~--G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 182 GKKVLVIGAGEMGELVAKHLAEK--GVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPH 254 (423)
T ss_pred CCEEEEECchHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCC
Confidence 46899999999999999999988 87 89999998776554432 2333222 222 46789999999876543
|
|
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.007 Score=54.99 Aligned_cols=66 Identities=26% Similarity=0.273 Sum_probs=49.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|-||+.+++.|..- |++|++.+|.... .++.....++ +.++++|+|+.+.+.+.
T Consensus 119 ~L~gktvgIiG~G~IG~~vA~~l~af--G~~V~~~~r~~~~------~~~~~~~~~l~ell~~aDiv~~~lp~t~ 185 (303)
T PRK06436 119 LLYNKSLGILGYGGIGRRVALLAKAF--GMNIYAYTRSYVN------DGISSIYMEPEDIMKKSDFVLISLPLTD 185 (303)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcc------cCcccccCCHHHHHhhCCEEEECCCCCc
Confidence 34568999999999999999999888 9999999986432 1221112233 46789999998888654
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.022 Score=51.96 Aligned_cols=70 Identities=19% Similarity=0.080 Sum_probs=49.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcC----C-ceeec-cCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM----G-ITPSL-KWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~----~-i~~~~-~D~~~~~~~D~Vi~~a~~~~ 154 (268)
+||.|+|+|.||..++..|....-..++..++.++++... +... . ..... .|.+.++++|+||.+|+...
T Consensus 4 ~Ki~IiGaG~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~~~ 83 (312)
T cd05293 4 NKVTVVGVGQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGARQ 83 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCCCC
Confidence 5999999999999999999887112379999987654321 1111 1 12232 56678999999999998643
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0036 Score=56.81 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=48.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Cceeec-c----------CccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSL-K----------WTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~-~----------D~~~~~~~D~Vi~~a~ 151 (268)
.|||+|+|+|-||..++-.|.+. |++|+.++|..++.+.+.+. |+.... + +.+....+|+||.+.-
T Consensus 2 ~m~I~IiGaGaiG~~~a~~L~~~--G~~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 2 SMTWHILGAGSLGSLWACRLARA--GLPVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred CceEEEECCCHHHHHHHHHHHhC--CCCeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCCCCcccccccCEEEEECC
Confidence 35899999999999999999999 99999999976555544432 332211 0 1123457899988865
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 80 ~ 80 (305)
T PRK05708 80 A 80 (305)
T ss_pred H
Confidence 4
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0041 Score=59.61 Aligned_cols=69 Identities=10% Similarity=0.076 Sum_probs=50.7
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
.+..++|+|+|.|.||+.+++.|+.. |.+|++.++++.+.......|++....+ +.++.+|+|+.+.+.
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~--Ga~ViV~e~dp~~a~~A~~~G~~~~~le-ell~~ADIVI~atGt 319 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGF--GARVVVTEIDPICALQAAMEGYQVVTLE-DVVETADIFVTATGN 319 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHhcCceeccHH-HHHhcCCEEEECCCc
Confidence 34567999999999999999999999 9999999887665432222354433211 467889999887653
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.023 Score=52.64 Aligned_cols=68 Identities=15% Similarity=0.110 Sum_probs=49.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc----C-Cceeec-cCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----M-GITPSL-KWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~----~-~i~~~~-~D~~~~~~~D~Vi~~a~~ 152 (268)
+||.|+|+|.||..++..|+.. +. ++..++.++++... +.. . ..+... .|.+.++++|+||.+|+.
T Consensus 38 ~KI~IIGaG~VG~~~a~~l~~~--~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGNVGMAIAQTILTQ--DLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCC
Confidence 5999999999999999999887 54 79999987764321 111 1 122222 356679999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 116 ~~ 117 (350)
T PLN02602 116 RQ 117 (350)
T ss_pred CC
Confidence 43
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0072 Score=58.19 Aligned_cols=70 Identities=17% Similarity=0.255 Sum_probs=53.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-hhcCCceeeccC--ccccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-LINMGITPSLKW--TEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-l~~~~i~~~~~D--~~~~~~~D~Vi~~a~~~~ 154 (268)
.+++|+|+|.|-.|..+++.|++. |++|++.+++...... +...|++...+. .+.+.++|.||...+...
T Consensus 14 ~~~~v~v~G~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 14 LSGRVLVAGAGVSGRGIAAMLSEL--GCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cCCeEEEEccCHHHHHHHHHHHHC--CCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCCC
Confidence 467899999999999999999999 9999999986544333 244577776542 245678999998876543
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0092 Score=57.38 Aligned_cols=68 Identities=18% Similarity=0.114 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
.++|+|+|+|.+|..+++.|.++ |++|+++++.+.. .+.++..|++...++. +...++|.||...+..
T Consensus 16 ~~~v~viG~G~~G~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 16 GLRVVVAGLGVSGFAAADALLEL--GARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTSPGWR 89 (480)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEECCCcC
Confidence 46899999999999999999999 9999999865421 1335566887765442 2345799999887754
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.012 Score=57.08 Aligned_cols=94 Identities=14% Similarity=0.092 Sum_probs=63.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc------------------Cc--------
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK------------------WT-------- 137 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~------------------D~-------- 137 (268)
..+|+|+|+|.+|...+..++.. |.+|+++++++++.+..+..|.+.... |.
T Consensus 165 g~kVlViGaG~iGL~Ai~~Ak~l--GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 165 PAKVLVIGAGVAGLAAIGAAGSL--GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 46899999999999999999999 999999999988877777777664311 10
Q ss_pred -cccCCCCEEEEccCCCCCCChHHHH-HHHHHHhcCCCeEEEEcc
Q 024417 138 -EATQKFPYVIFCAPPSRSLDYPGDV-RLAALSWNGEGSFLFTSS 180 (268)
Q Consensus 138 -~~~~~~D~Vi~~a~~~~~~~~~~~~-~~~~~~~~gvkr~V~~SS 180 (268)
+...++|+||.+++...... ...+ +..+........+|.++.
T Consensus 243 ~~~~~gaDVVIetag~pg~~a-P~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPA-PKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred HhccCCCCEEEECCCCCcccC-cchHHHHHHHhcCCCCEEEEEcc
Confidence 01257999999998643211 1111 223222223356777764
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0035 Score=56.31 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=58.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+++|-.+|.|..|+.++..|++. ||.|++.+|+.++.+.+...|.+...--.|..+.+|+||-+.+..
T Consensus 35 ~~~iGFIGLG~MG~~M~~nLik~--G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGLGNMGSAMVSNLIKA--GYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEeeccchHHHHHHHHHc--CCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCCh
Confidence 56888999999999999999999 999999999999988888888766543347889999999998754
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0055 Score=58.64 Aligned_cols=68 Identities=10% Similarity=0.101 Sum_probs=50.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
+..++|+|+|+|.||+.+++.++.. |.+|+++++++.+.......|...... .+.+..+|+||.+.+.
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~--Ga~VIV~e~dp~r~~eA~~~G~~vv~l-eEal~~ADVVI~tTGt 319 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAA--GARVIVTEIDPICALQALMEGYQVLTL-EDVVSEADIFVTTTGN 319 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhHHHHhcCCeeccH-HHHHhhCCEEEECCCC
Confidence 4457899999999999999999999 999999999876543333345543321 1456788888876553
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0049 Score=56.57 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=51.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
+..++|.|+|.|-+|+.+++.|++. |++|++..|...+. +.....++... +. ++++++|+|+.+.++..
T Consensus 15 L~gktIgIIG~GsmG~AlA~~L~~s--G~~Vvv~~r~~~~s~~~A~~~G~~~~--s~~eaa~~ADVVvLaVPd~~ 85 (330)
T PRK05479 15 IKGKKVAIIGYGSQGHAHALNLRDS--GVDVVVGLREGSKSWKKAEADGFEVL--TVAEAAKWADVIMILLPDEV 85 (330)
T ss_pred hCCCEEEEEeeHHHHHHHHHHHHHC--CCEEEEEECCchhhHHHHHHCCCeeC--CHHHHHhcCCEEEEcCCHHH
Confidence 3457899999999999999999999 99999877764433 22233455432 44 57889999999988653
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.034 Score=50.67 Aligned_cols=70 Identities=14% Similarity=0.132 Sum_probs=49.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc------CCceeec-cCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN------MGITPSL-KWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~------~~i~~~~-~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||.|+|+|.||+.++-.|..+..+.++..++...+..+. |.. ...+... .|.+.++++|+|+.+|+..
T Consensus 1 ~KVaviGaG~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~p 80 (313)
T COG0039 1 MKVAVIGAGNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGVP 80 (313)
T ss_pred CeEEEECCChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCCC
Confidence 4899999999999999999887445589999998544321 111 1111221 2357899999999999854
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
+
T Consensus 81 r 81 (313)
T COG0039 81 R 81 (313)
T ss_pred C
Confidence 4
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0081 Score=54.82 Aligned_cols=66 Identities=18% Similarity=0.177 Sum_probs=49.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|-||+.+++.|..- |++|++.+|..+... ++.... .++ +.++++|+|+.+.+.+.
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~af--G~~V~~~~~~~~~~~-----~~~~~~~~~~l~e~l~~aDvvv~~lPlt~ 202 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTW--GFPLRCWSRSRKSWP-----GVQSFAGREELSAFLSQTRVLINLLPNTP 202 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCCCCC-----CceeecccccHHHHHhcCCEEEECCCCCH
Confidence 4457999999999999999999998 999999998654322 111111 122 47899999999888754
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.031 Score=63.60 Aligned_cols=34 Identities=9% Similarity=0.036 Sum_probs=29.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.+.+||||. +-||..++++|.+++ |++|+.+.|+
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQC-QAHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCC
Confidence 457899986 999999999999872 5899999987
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.014 Score=56.00 Aligned_cols=67 Identities=15% Similarity=0.226 Sum_probs=52.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-----hhhhcCCceeeccCc--cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELINMGITPSLKWT--EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-----~~l~~~~i~~~~~D~--~~~~~~D~Vi~~a~~ 152 (268)
+++|+|+|.|..|..+++.|++. |++|++.++++... ..+...|+....++. +.+.++|.||...+.
T Consensus 14 ~~~i~v~G~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi 87 (458)
T PRK01710 14 NKKVAVVGIGVSNIPLIKFLVKL--GAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSM 87 (458)
T ss_pred CCeEEEEcccHHHHHHHHHHHHC--CCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCC
Confidence 57899999999999999999999 99999999864321 235566777765542 456789999988654
|
|
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.012 Score=57.21 Aligned_cols=67 Identities=15% Similarity=0.207 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh-----------hcCC-------------ceeeccCccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INMG-------------ITPSLKWTEA 139 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l-----------~~~~-------------i~~~~~D~~~ 139 (268)
.++|.|+|+|.+|..++..|+.. |++|+..+++++..+.. ...| +.. ..|.+.
T Consensus 7 i~~V~VIGaG~MG~gIA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-~~~~~~ 83 (507)
T PRK08268 7 IATVAVIGAGAMGAGIAQVAAQA--GHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP-VEALAD 83 (507)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE-eCCHHH
Confidence 36899999999999999999999 99999999987765441 2222 111 124455
Q ss_pred cCCCCEEEEccCCC
Q 024417 140 TQKFPYVIFCAPPS 153 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (268)
+.++|.||-+....
T Consensus 84 ~~~aDlViEav~E~ 97 (507)
T PRK08268 84 LADCDLVVEAIVER 97 (507)
T ss_pred hCCCCEEEEcCccc
Confidence 77999999987654
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0069 Score=56.03 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=39.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeC--CCCcchhhhcCCceeec--cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTM--TADHHDELINMGITPSL--KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~R--~~~~~~~l~~~~i~~~~--~D~~~~~~~D~Vi~~a~ 151 (268)
.++|.|+|+ |++|+.|++.|.++ ||..++..+.. +..+. +...+.+... .+.+.+.++|+||.+++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~--~~~~~~~~~v~~~~~~~~~~~D~vf~a~p 78 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKK--VTFEGRDYTVEELTEDSFDGVDIALFSAG 78 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCe--eeecCceeEEEeCCHHHHcCCCEEEECCC
Confidence 358999997 99999999999886 23335554443 32222 1112222222 23234567888887765
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.02 Score=52.60 Aligned_cols=69 Identities=10% Similarity=0.072 Sum_probs=45.1
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcC-----CCCeEEEEeCCCCc--chh----hhcCC----ceee-ccC-ccccCCCCEEE
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEH-----PGCQIYGQTMTADH--HDE----LINMG----ITPS-LKW-TEATQKFPYVI 147 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~-----~G~~V~~~~R~~~~--~~~----l~~~~----i~~~-~~D-~~~~~~~D~Vi 147 (268)
||.|+|+ |.||..++..|.... ..++++.+|++++. ... +.... .... ..+ .+.++++|+||
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV 80 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI 80 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence 5899998 999999999998740 02368899985432 111 11110 0111 113 47899999999
Q ss_pred EccCCCC
Q 024417 148 FCAPPSR 154 (268)
Q Consensus 148 ~~a~~~~ 154 (268)
++|+...
T Consensus 81 itAG~~~ 87 (324)
T TIGR01758 81 LVGAFPR 87 (324)
T ss_pred EcCCCCC
Confidence 9999654
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0094 Score=54.26 Aligned_cols=66 Identities=15% Similarity=0.165 Sum_probs=49.4
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc-------CCceeeccCccccCCCCEEEEccCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-------MGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~-------~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
||.|+|+|.||..++..|+.+ +. ++..++.++++... |.. ..++....|.+.++++|+||.+|+.
T Consensus 1 Ki~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~ 78 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALAL--GLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGP 78 (307)
T ss_pred CEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCC
Confidence 689999999999999999887 65 79999987654321 211 1233334567899999999999985
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 79 ~ 79 (307)
T cd05290 79 S 79 (307)
T ss_pred C
Confidence 3
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0067 Score=54.57 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=49.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcC------CceeeccC-c-cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM------GITPSLKW-T-EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~------~i~~~~~D-~-~~~~~~D~Vi~~a~~ 152 (268)
..++|+|+|+|..|+.++..|.+. |. +|++++|+.++.+.+... .......+ . +.+.++|+||++.+.
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~--G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~ 202 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTL--GVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPT 202 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcC
Confidence 346899999999999999999999 87 899999998776655321 11222112 1 356789999999654
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.022 Score=44.21 Aligned_cols=94 Identities=14% Similarity=0.101 Sum_probs=53.7
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhhcC--Cceee---ccCccc--cCCCCEEEEccCCCCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINM--GITPS---LKWTEA--TQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~~--~i~~~---~~D~~~--~~~~D~Vi~~a~~~~~~ 156 (268)
||.|+|+ |.+|..+++.|.+. |++++.++ +++.++.+.+... .+... ..+.+. ..++|+||.|.+....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~- 78 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVS- 78 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHH-
Confidence 5789996 99999999999884 48899888 4433222222211 12111 112122 2589999998887642
Q ss_pred ChHHHHHHHHHHhcCCCeEEEEccCee
Q 024417 157 DYPGDVRLAALSWNGEGSFLFTSSSAI 183 (268)
Q Consensus 157 ~~~~~~~~~~~~~~gvkr~V~~SS~~v 183 (268)
.+.+..+.......+.+|-+||..-
T Consensus 79 --~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 79 --KEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred --HHHHHHHHhhhcCCCEEEECCcccc
Confidence 2222222211223467888887644
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0075 Score=53.68 Aligned_cols=68 Identities=18% Similarity=0.264 Sum_probs=43.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---cCCceeeccCccc-cCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMGITPSLKWTEA-TQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~~~i~~~~~D~~~-~~~~D~Vi~~a~~~ 153 (268)
|+||.|+|+|.||+.+++.|.+. |+.++.++........... ..++. ...|.+. ..++|+|+.|+++.
T Consensus 1 m~rVgIiG~G~iG~~~~~~l~~~-~~~~l~~v~~~~~~~~~~~~~~~~~~~-~~~d~~~l~~~~DvVve~t~~~ 72 (265)
T PRK13303 1 MMKVAMIGFGAIGAAVLELLEHD-PDLRVDWVIVPEHSIDAVRRALGEAVR-VVSSVDALPQRPDLVVECAGHA 72 (265)
T ss_pred CcEEEEECCCHHHHHHHHHHhhC-CCceEEEEEEcCCCHHHHhhhhccCCe-eeCCHHHhccCCCEEEECCCHH
Confidence 57999999999999999999875 4778776653322221111 11222 2234433 35699999998864
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.005 Score=56.56 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=53.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc--Ccc---cc-CCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WTE---AT-QKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~--D~~---~~-~~~D~Vi~~a~ 151 (268)
..+|+|+|+|-+|...++.++.. |.+|++++|++++.+..++.|.+.++- |.+ .+ +.+|+||.+++
T Consensus 167 G~~V~I~G~GGlGh~avQ~Aka~--ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~ 238 (339)
T COG1064 167 GKWVAVVGAGGLGHMAVQYAKAM--GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG 238 (339)
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC
Confidence 46899999999999999999999 999999999999887777777665432 332 22 23999999999
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0054 Score=58.16 Aligned_cols=69 Identities=22% Similarity=0.261 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc-CCceeecc-Cc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~-~~i~~~~~-D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|.+|..+++.|... | .+|++++|+.++...+.. .+...+.. +. +.+.++|+||.|.+...
T Consensus 180 ~~~VlViGaG~iG~~~a~~L~~~--G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 180 GKKALLIGAGEMGELVAKHLLRK--GVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred CCEEEEECChHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCC
Confidence 46899999999999999999998 8 789999998776554432 23322221 22 46789999999876543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0086 Score=54.91 Aligned_cols=68 Identities=18% Similarity=0.212 Sum_probs=48.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
..++|-|+|.|-||+.+++.|..- |.+|++.++...+... ...+.... .++ +.+..+|+|+...+.+.
T Consensus 141 ~gkTvGIiG~G~IG~~va~~l~af--gm~v~~~d~~~~~~~~-~~~~~~~~-~~Ld~lL~~sDiv~lh~PlT~ 209 (324)
T COG0111 141 AGKTVGIIGLGRIGRAVAKRLKAF--GMKVIGYDPYSPRERA-GVDGVVGV-DSLDELLAEADILTLHLPLTP 209 (324)
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCCchhhh-ccccceec-ccHHHHHhhCCEEEEcCCCCc
Confidence 357899999999999999999999 9999999994332111 11112111 223 47888999988877654
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.018 Score=53.37 Aligned_cols=93 Identities=15% Similarity=0.095 Sum_probs=54.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhhc--C---C---ceeeccCcc-ccCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELIN--M---G---ITPSLKWTE-ATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~--~---~---i~~~~~D~~-~~~~~D~Vi~~a~~~ 153 (268)
+||.|+|+ |++|..+++.|.+. |++++..+ ++.....+.+.. . + ......|.+ ...++|+||.|.+..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~ 79 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHG 79 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCch
Confidence 47999997 99999999999865 88999855 543211111110 1 1 111112332 335899999888754
Q ss_pred CCCChHHHHHHHHHHhcCCCeEEEEccCeee
Q 024417 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 154 ~~~~~~~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
.. ..+...+ .+.| +++|-.|+..=+
T Consensus 80 ~s----~~~~~~~-~~~G-~~VIDlS~~fR~ 104 (346)
T TIGR01850 80 VS----AELAPEL-LAAG-VKVIDLSADFRL 104 (346)
T ss_pred HH----HHHHHHH-HhCC-CEEEeCChhhhc
Confidence 21 1222221 2334 788888876433
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0051 Score=66.31 Aligned_cols=67 Identities=12% Similarity=0.106 Sum_probs=55.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
++|-++|.|.+|..+++.|++. |++|++.+|++++.+.+...|.....-..++.+++|+||.|.+..
T Consensus 5 ~~IGfIGLG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~ 71 (1378)
T PLN02858 5 GVVGFVGLDSLSFELASSLLRS--GFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHP 71 (1378)
T ss_pred CeEEEEchhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCCh
Confidence 5799999999999999999999 999999999988888777777654322225788999999998754
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.008 Score=43.14 Aligned_cols=34 Identities=18% Similarity=0.278 Sum_probs=31.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~ 121 (268)
+|+|+|+|++|-.++..|.+. |.+|+.+.|.+.-
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~--g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAEL--GKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHT--TSEEEEEESSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHh--CcEEEEEeccchh
Confidence 689999999999999999999 9999999997643
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.015 Score=47.64 Aligned_cols=63 Identities=14% Similarity=0.134 Sum_probs=43.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-CceeeccCc--cccCCCCEEEEc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT--EATQKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~~D~--~~~~~~D~Vi~~ 149 (268)
..++|+|+|.|-+|...++.|++. |++|++++ ++..+++... .+++..... +.+.++|.||-+
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~--ga~V~VIs--p~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaa 77 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDT--GAFVTVVS--PEICKEMKELPYITWKQKTFSNDDIKDAHLIYAA 77 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEc--CccCHHHHhccCcEEEecccChhcCCCceEEEEC
Confidence 357999999999999999999999 99999885 3333333332 233332222 357788887754
|
|
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.011 Score=54.22 Aligned_cols=66 Identities=21% Similarity=0.323 Sum_probs=44.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eCCC-CcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTA-DHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~-~R~~-~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+.||.|+|+|.+|+.+++.+.+. |+.++.++ +|++ ++.. ...++... .|. +.+.++|+|++|.+..
T Consensus 3 kIRVgIVG~GnIGr~~a~al~~~-pd~ELVgV~dr~~~~~~~--~~~~v~~~-~d~~e~l~~iDVViIctPs~ 71 (324)
T TIGR01921 3 KIRAAIVGYGNLGRSVEKAIQQQ-PDMELVGVFSRRGAETLD--TETPVYAV-ADDEKHLDDVDVLILCMGSA 71 (324)
T ss_pred CcEEEEEeecHHHHHHHHHHHhC-CCcEEEEEEcCCcHHHHh--hcCCcccc-CCHHHhccCCCEEEEcCCCc
Confidence 46899999999999999988765 68999976 5553 2221 11122111 232 3567899999997653
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.013 Score=56.57 Aligned_cols=69 Identities=16% Similarity=0.166 Sum_probs=53.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC--ccccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW--TEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D--~~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|.|-.|...++.|++. |++|++.++.+...+.+++.|+..+..+ .+.+.++|.||...+...
T Consensus 12 ~~~v~V~G~G~sG~aa~~~L~~~--G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 12 GAPVLVAGAGVTGRAVLAALTRF--GARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRP 82 (488)
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCC
Confidence 46899999999999999999999 9999999976555444555677665443 245678999998887543
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.014 Score=56.80 Aligned_cols=69 Identities=13% Similarity=0.264 Sum_probs=51.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcC--Ccee--ecc-Cc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM--GITP--SLK-WT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~--~i~~--~~~-D~-~~~~~~D~Vi~~a~~~ 153 (268)
..++|+|+|+|-+|+.+++.|... |. +|+++.|+.++...+... +... ... |. +.+.++|+||.+.+..
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~--G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSK--GCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence 357899999999999999999998 86 799999998776665432 3222 222 22 4678999999876543
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.018 Score=54.66 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=49.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc----chhhhcCCceeeccC-c-cccC-CCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDELINMGITPSLKW-T-EATQ-KFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~----~~~l~~~~i~~~~~D-~-~~~~-~~D~Vi~~a~~~ 153 (268)
.++|+|+|.|-+|...++.|+++ |++|.+.+++... .+.+...+++...+. . +... ++|.||...+..
T Consensus 5 ~k~v~v~G~g~~G~s~a~~l~~~--G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 5 NKKVLVLGLAKSGYAAAKLLHKL--GANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGIP 79 (447)
T ss_pred CCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence 46899999977999999999999 9999999976432 133555577665432 2 2334 399999988754
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.012 Score=48.94 Aligned_cols=57 Identities=14% Similarity=0.189 Sum_probs=44.5
Q ss_pred CCCCeEEEEcccH-HHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~-IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
+..++|+|+|+|- +|..+++.|.++ |.+|+...|+.+... +.+.++|+||.+.+...
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~~~~l~--------------~~l~~aDiVIsat~~~~ 99 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSKTKNLK--------------EHTKQADIVIVAVGKPG 99 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECCchhHH--------------HHHhhCCEEEEcCCCCc
Confidence 4468999999985 699999999999 999999998743221 35678889988877643
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0061 Score=55.61 Aligned_cols=68 Identities=12% Similarity=0.160 Sum_probs=47.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--Ccee-----------eccCc-ccc-CCCCEEEEc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITP-----------SLKWT-EAT-QKFPYVIFC 149 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~i~~-----------~~~D~-~~~-~~~D~Vi~~ 149 (268)
|||.|+|+|-+|..++..|.+. |++|+.++|+++..+.+... +.+. ...|. +.+ .++|.||.+
T Consensus 1 MkI~IiGaGa~G~ala~~L~~~--g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dliiia 78 (326)
T PRK14620 1 MKISILGAGSFGTAIAIALSSK--KISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCIILA 78 (326)
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEEEEE
Confidence 3799999999999999999999 99999999976554444321 1110 11222 233 578999988
Q ss_pred cCCCC
Q 024417 150 APPSR 154 (268)
Q Consensus 150 a~~~~ 154 (268)
..+..
T Consensus 79 vks~~ 83 (326)
T PRK14620 79 VPTQQ 83 (326)
T ss_pred eCHHH
Confidence 77653
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0087 Score=54.86 Aligned_cols=93 Identities=15% Similarity=0.067 Sum_probs=53.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CC---ceeeccCcc--ccCCCCEEEEccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG---ITPSLKWTE--ATQKFPYVIFCAP 151 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~---i~~~~~D~~--~~~~~D~Vi~~a~ 151 (268)
+|+||.|+|+ ||.|..|.+.|..+ |..++...+.+...-+.+.. .+ ......|.+ ...+||+||.|.+
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~H-p~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~~~~~~DvvFlalP 79 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGH-PDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKIELDECDVVFLALP 79 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcC-CCeEEEEeechhhcCCchHHhCcccccccccccccCChhhhhcccCCEEEEecC
Confidence 4789999997 99999999999886 78897766644311111111 11 111122332 2456999998877
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEccCe
Q 024417 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~ 182 (268)
.....++ +..+ ...++ ++|=+|+..
T Consensus 80 hg~s~~~---v~~l--~~~g~-~VIDLSadf 104 (349)
T COG0002 80 HGVSAEL---VPEL--LEAGC-KVIDLSADF 104 (349)
T ss_pred chhHHHH---HHHH--HhCCC-eEEECCccc
Confidence 6532211 1222 12343 377777653
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.011 Score=53.22 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~-V~~~~R~~ 119 (268)
.++++|+|+|-+|+.++..|.+. |++ |+++.|+.
T Consensus 126 ~k~vlI~GAGGagrAia~~La~~--G~~~V~I~~R~~ 160 (289)
T PRK12548 126 GKKLTVIGAGGAATAIQVQCALD--GAKEITIFNIKD 160 (289)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCc
Confidence 46899999999999999999999 985 99999986
|
|
| >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.0089 Score=57.18 Aligned_cols=68 Identities=15% Similarity=0.149 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+++|+|+|.|-.|..+++.|++. |++|++.|+.......+...|++....+.+.+.++|.||...+..
T Consensus 9 ~~~i~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~ 76 (460)
T PRK01390 9 GKTVAVFGLGGSGLATARALVAG--GAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP 76 (460)
T ss_pred CCEEEEEeecHhHHHHHHHHHHC--CCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence 46899999999999999999999 999999997654444455567664433334467899999877643
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.017 Score=56.15 Aligned_cols=68 Identities=16% Similarity=0.146 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh-----------hcCCce------------eeccCcccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INMGIT------------PSLKWTEAT 140 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l-----------~~~~i~------------~~~~D~~~~ 140 (268)
.++|.|+|+|..|+.++..|+.. |++|+..+++++..+.. ...|.. ....|++.+
T Consensus 5 ~~kV~VIGaG~MG~gIA~~la~a--G~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l 82 (503)
T TIGR02279 5 VVTVAVIGAGAMGAGIAQVAASA--GHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL 82 (503)
T ss_pred ccEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence 46899999999999999999999 99999999987765421 112210 011244566
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
.++|.||-+....
T Consensus 83 ~~aDlVIEav~E~ 95 (503)
T TIGR02279 83 ADAGLVIEAIVEN 95 (503)
T ss_pred CCCCEEEEcCcCc
Confidence 7999999987654
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=54.92 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=47.0
Q ss_pred CCCCeEEEEcc-----------------cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-cCc------
Q 024417 82 VGENDLLIVGP-----------------GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KWT------ 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-----------------G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-~D~------ 137 (268)
+..++|||||. |.+|.+++++|.++ |++|+.++++.+ ... ..++..+. .+.
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~-~~~--~~~~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVN-LPT--PAGVKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCcc-ccC--CCCcEEEccCCHHHHHHH
Confidence 45578999964 89999999999999 999999988653 111 12332221 121
Q ss_pred --cccCCCCEEEEccCCC
Q 024417 138 --EATQKFPYVIFCAPPS 153 (268)
Q Consensus 138 --~~~~~~D~Vi~~a~~~ 153 (268)
+.+..+|++||+|+..
T Consensus 261 v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 261 VLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHhcCCCCEEEEccccc
Confidence 1356799999999864
|
|
| >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.021 Score=54.74 Aligned_cols=69 Identities=17% Similarity=0.286 Sum_probs=52.7
Q ss_pred CCCeEEEEcccHHHHH-HHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccC-ccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKW-TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~-L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D-~~~~~~~D~Vi~~a~~~ 153 (268)
.+++|+|+|.|-.|.. +++.|.++ |++|++.|.+... .+.+++.+++...+. .+.+.++|.||...+..
T Consensus 6 ~~~~v~viG~G~sG~s~~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~d~vv~spgi~ 77 (461)
T PRK00421 6 RIKRIHFVGIGGIGMSGLAEVLLNL--GYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKDADVVVYSSAIP 77 (461)
T ss_pred CCCEEEEEEEchhhHHHHHHHHHhC--CCeEEEECCCCChHHHHHHHCCCEEeCCCCHHHCCCCCEEEECCCCC
Confidence 4578999999999999 79999999 9999999976432 334555677776432 34567899999887654
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.0074 Score=56.44 Aligned_cols=55 Identities=25% Similarity=0.273 Sum_probs=42.8
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
.+++|.|+| .|.+|..+++.|.+. |++|++.+|++.. +. +.+.++|+||.|.+..
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~~~~~--------------~~~~~~~~aDlVilavP~~ 153 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQDDWD--------------RAEDILADAGMVIVSVPIH 153 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCCCcch--------------hHHHHHhcCCEEEEeCcHH
Confidence 357899998 799999999999999 9999999985321 11 3456788888777654
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.033 Score=48.39 Aligned_cols=72 Identities=11% Similarity=0.112 Sum_probs=52.6
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceeeccCc--------------cccC
Q 024417 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT--------------EATQ 141 (268)
Q Consensus 84 m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~--------------~~~~ 141 (268)
.+.++++| +|-||+.+.++|+++ |..+.+++-+.|+.+...+ ..+-++.+|. +.+.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~k--gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEK--GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHc--CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 46788887 599999999999999 9999888776666543322 1233445553 1467
Q ss_pred CCCEEEEccCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD 157 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~ 157 (268)
..|++|+.|+.....+
T Consensus 83 ~iDIlINgAGi~~dkd 98 (261)
T KOG4169|consen 83 TIDILINGAGILDDKD 98 (261)
T ss_pred ceEEEEcccccccchh
Confidence 9999999999876544
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.019 Score=49.08 Aligned_cols=67 Identities=18% Similarity=0.075 Sum_probs=46.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcC-CceeeccC--ccccCCCCEEEEccC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINM-GITPSLKW--TEATQKFPYVIFCAP 151 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~-~i~~~~~D--~~~~~~~D~Vi~~a~ 151 (268)
..++|||+|+|-+|...++.|++. |++|+++.+...+ ...+... .+.+...+ .+.+.++|.||-+..
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~--ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKY--GAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCC
Confidence 357999999999999999999999 9999999875322 2233222 24443322 235788998775433
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.013 Score=53.86 Aligned_cols=96 Identities=13% Similarity=0.156 Sum_probs=58.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHH-HhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCCChH
Q 024417 82 VGENDLLIVGPGVLGRLVAEQW-RQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLDYP 159 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L-~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~~~ 159 (268)
...++|.|+|.|.||+.+++.| ... |++|++.++..... .. ..++. ..++ +.++++|+|+.+++........
T Consensus 144 l~g~~VgIIG~G~IG~~vA~~L~~~~--g~~V~~~d~~~~~~--~~-~~~~~-~~~l~ell~~aDvIvl~lP~t~~t~~l 217 (332)
T PRK08605 144 IKDLKVAVIGTGRIGLAVAKIFAKGY--GSDVVAYDPFPNAK--AA-TYVDY-KDTIEEAVEGADIVTLHMPATKYNHYL 217 (332)
T ss_pred eCCCEEEEECCCHHHHHHHHHHHhcC--CCEEEEECCCccHh--HH-hhccc-cCCHHHHHHhCCEEEEeCCCCcchhhh
Confidence 4557899999999999999999 445 89999998865432 11 12221 1233 4688999999888765432211
Q ss_pred HHHHHHHHHhcCCCeEEEEccCeee
Q 024417 160 GDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 160 ~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
-+ ...+.....-.-||-+|...+-
T Consensus 218 i~-~~~l~~mk~gailIN~sRG~~v 241 (332)
T PRK08605 218 FN-ADLFKHFKKGAVFVNCARGSLV 241 (332)
T ss_pred cC-HHHHhcCCCCcEEEECCCCccc
Confidence 01 1112111222456666665543
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.012 Score=55.03 Aligned_cols=58 Identities=24% Similarity=0.285 Sum_probs=44.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.++|.|+|. |.||+.+++.|.+.. +++|++.++..+.. .+. +.+.++|+||.|.+...
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~d~~~------------~~~~~~v~~aDlVilavPv~~ 63 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPADPGS------------LDPATLLQRADVLIFSAPIRH 63 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCCcccc------------CCHHHHhcCCCEEEEeCCHHH
Confidence 469999998 999999999999753 89999999852211 122 35778999999888654
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.008 Score=58.04 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Cceeec-cCccccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSL-KWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~-~D~~~~~~~D~Vi~~a~~~~ 154 (268)
..++++|+|+|-+|+.++..|.+. |++|+...|+.++.+.+... +..... .+.+.+.++|+||+|.+...
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~--G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~ 402 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARA--GAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSV 402 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCC
Confidence 346899999999999999999999 99999999987665544321 111111 12234678999999987653
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.042 Score=49.77 Aligned_cols=65 Identities=15% Similarity=0.093 Sum_probs=47.8
Q ss_pred EEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchhh----hcC-----Cceeec-cCccccCCCCEEEEccCCC
Q 024417 87 LLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDEL----INM-----GITPSL-KWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~l----~~~-----~i~~~~-~D~~~~~~~D~Vi~~a~~~ 153 (268)
|.|+|+|.+|..++..|+.. | .+++.+++++++.... ... ..+... .|.+.+.++|+||.+++..
T Consensus 1 i~iiGaG~VG~~~a~~l~~~--~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIitag~p 77 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAK--GLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAP 77 (300)
T ss_pred CEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEEcCCCC
Confidence 46899999999999999988 7 6899999987654321 111 112222 3457899999999999854
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.0065 Score=50.68 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=53.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--C-ceeeccCc---c-------ccCCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--G-ITPSLKWT---E-------ATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~-i~~~~~D~---~-------~~~~~D~Vi~~ 149 (268)
.+.|++||+ --||+.+++.|.+. |.+|+++.|++++...|-+. + ++++.+|+ + ...-.|.+++.
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNN 84 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNN 84 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhc--CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhcc
Confidence 457999998 57999999999999 99999999999887766432 3 77777775 2 23467888988
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
|+..
T Consensus 85 AgvA 88 (245)
T KOG1207|consen 85 AGVA 88 (245)
T ss_pred chhh
Confidence 8753
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.045 Score=49.46 Aligned_cols=65 Identities=12% Similarity=0.093 Sum_probs=46.7
Q ss_pred EEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hhcC------Cceee-ccCccccCCCCEEEEccCCC
Q 024417 87 LLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LINM------GITPS-LKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~~~------~i~~~-~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|.|+|+|.+|..++..|... |. +|+.++++++.... +... ..... ..|.+.++++|+||.+++..
T Consensus 1 I~IIGaG~vG~~ia~~la~~--~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~~l~dADiVIit~g~p 77 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALK--ELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVVITAGIP 77 (300)
T ss_pred CEEECCCHHHHHHHHHHHhC--CCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHHHhCCCCEEEEecCCC
Confidence 46899999999999999887 76 99999998764321 1111 11221 13556789999999999754
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0084 Score=56.82 Aligned_cols=70 Identities=16% Similarity=0.170 Sum_probs=53.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcC-C-ceeeccC-c-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-G-ITPSLKW-T-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~-~-i~~~~~D-~-~~~~~~D~Vi~~a~~~~ 154 (268)
..++|+|+|+|-.|+.+++.|.+. |. +|++..|+.++...+... + ......+ . +.+.++|+||+|.+...
T Consensus 180 ~~kkvlviGaG~~a~~va~~L~~~--g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 180 SSKNVLIIGAGQTGELLFRHVTAL--APKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred cCCEEEEEcCcHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCC
Confidence 347899999999999999999998 85 799999988776665432 2 3333222 2 46889999999987654
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.053 Score=49.70 Aligned_cols=144 Identities=10% Similarity=0.053 Sum_probs=80.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCCCc--ch----hhhc------CCceeeccCccccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HD----ELIN------MGITPSLKWTEATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~~~~--~~----~l~~------~~i~~~~~D~~~~~~~D 144 (268)
+||.|+|+ |.||..++..|... |. ++..+|.+++. .. .+.. ..++....|.+.++++|
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASG--EMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 58999998 99999999999877 65 78888885322 11 1111 11223334557899999
Q ss_pred EEEEccCCCCCC-C----hHH----HHHHHH--HHhcC--CCeEEEEccCeeecCCCCCCCCCCCC-CCCCCCCHHHHHH
Q 024417 145 YVIFCAPPSRSL-D----YPG----DVRLAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRTDVL 210 (268)
Q Consensus 145 ~Vi~~a~~~~~~-~----~~~----~~~~~~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~~-~~p~~~~~y~~sK 210 (268)
+||.+|+..... . ..+ -++.+. .++.+ -..+|.+|. -+ +--. ..+-+.++ ..+. ..||.++
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN-Pv-D~~t-~~~~k~sg~~p~~--~ViG~t~ 155 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN-PC-NTNA-LIAMKNAPDIPPD--NFTAMTR 155 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC-cH-HHHH-HHHHHHcCCCChH--heEEehH
Confidence 999999864422 1 111 122222 12333 234555552 11 0000 00111121 2222 3456678
Q ss_pred HHHHHHHHHc----C--ceEEEeCceecCCC
Q 024417 211 LKAEKVILEF----G--GCVLRLAGLYKADR 235 (268)
Q Consensus 211 ~~aE~~l~~~----~--~tIlRp~~vyG~~~ 235 (268)
+..+++.... + ...+|...|||+..
T Consensus 156 LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 156 LDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred HHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 8877766544 2 46778888899853
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0068 Score=52.37 Aligned_cols=68 Identities=21% Similarity=0.206 Sum_probs=42.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchhhhcC-CceeeccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~l~~~-~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
++|.|+|+|.||..+++.+.+...+.+ |.+.+|+.++..++... +.... .|. +.+.+.|.|+-||++.
T Consensus 1 l~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~-s~ide~~~~~DlvVEaAS~~ 71 (255)
T COG1712 1 LKVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCV-SDIDELIAEVDLVVEAASPE 71 (255)
T ss_pred CeEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCcc-ccHHHHhhccceeeeeCCHH
Confidence 478999999999999999976422344 45667888777655432 22111 232 2346666666666653
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0099 Score=55.52 Aligned_cols=67 Identities=19% Similarity=0.171 Sum_probs=49.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Ccee--eccCc----cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITP--SLKWT----EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~--~~~D~----~~~~~~D~Vi~~a~~ 152 (268)
..+|+|+|+|-+|+.+++.|... |.+|++++|++++.+.+... +... ...+. +.+.++|+||.+++.
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~l--Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGL--GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 45799999999999999999999 99999999987765554322 2211 11121 357899999998753
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.02 Score=53.97 Aligned_cols=70 Identities=24% Similarity=0.356 Sum_probs=55.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc-CCceeeccCc--cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLKWT--EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~-~~i~~~~~D~--~~~~~~D~Vi~~a~~~~ 154 (268)
..+++||+|+|-+|.-++++|.++ | .+|++.-|+.++...|.. .+.+....+. +.+..+|+||-+.+...
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~--g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEK--GVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhC--CCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence 457899999999999999999999 8 588899999888776643 4555554432 57899999998866543
|
|
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.01 Score=48.85 Aligned_cols=67 Identities=18% Similarity=0.216 Sum_probs=47.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
..++|.|+|.|-.|+.-+.-|++. |.+|++..|... ..+..+..|+++. +. |+.+++|+|+.+.+..
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDS--G~~V~Vglr~~s~s~~~A~~~Gf~v~--~~~eAv~~aDvV~~L~PD~ 71 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDS--GVNVIVGLREGSASWEKAKADGFEVM--SVAEAVKKADVVMLLLPDE 71 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHC--C-EEEEEE-TTCHHHHHHHHTT-ECC--EHHHHHHC-SEEEE-S-HH
T ss_pred CCCEEEEECCChHHHHHHHHHHhC--CCCEEEEecCCCcCHHHHHHCCCeec--cHHHHHhhCCEEEEeCChH
Confidence 357999999999999999999999 999998888765 3444556677654 32 5789999999887653
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PTZ00431 pyrroline carboxylate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.0084 Score=53.10 Aligned_cols=61 Identities=15% Similarity=0.191 Sum_probs=44.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
|||.|+|+|.+|..+++.|++. + .+|++.+|+.++. ++... .|. +..+++|+||.+..|..
T Consensus 4 mkI~iIG~G~mG~ai~~~l~~~--~~~~~~~i~~~~~~~~~~------~~~~~-~~~~~~~~~~D~Vilavkp~~ 69 (260)
T PTZ00431 4 IRVGFIGLGKMGSALAYGIENS--NIIGKENIYYHTPSKKNT------PFVYL-QSNEELAKTCDIIVLAVKPDL 69 (260)
T ss_pred CEEEEECccHHHHHHHHHHHhC--CCCCcceEEEECCChhcC------CeEEe-CChHHHHHhCCEEEEEeCHHH
Confidence 5899999999999999999987 5 3588888865432 22222 232 45678999999877754
|
|
| >PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.017 Score=54.58 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=46.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc-ccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-ATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~-~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|.|.+|..+++.|+++ |++|++.++++..........-. ...+.+ ..+++|.||.+.+...
T Consensus 3 ~~~i~iiGlG~~G~slA~~l~~~--G~~V~g~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~dlvV~s~gi~~ 71 (418)
T PRK00683 3 LQRVVVLGLGVTGKSIARFLAQK--GVYVIGVDKSLEALQSCPYIHER-YLENAEEFPEQVDLVVRSPGIKK 71 (418)
T ss_pred CCeEEEEEECHHHHHHHHHHHHC--CCEEEEEeCCccccchhHHHhhh-hcCCcHHHhcCCCEEEECCCCCC
Confidence 46899999999999999999999 99999999876533211000000 011122 2467899988877653
|
|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=56.72 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|+.- |++|++.+|.... +.....+++.. ++ +.++.+|+|+.+.+.+.
T Consensus 138 l~gktvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~ell~~aDiV~l~lP~t~ 206 (526)
T PRK13581 138 LYGKTLGIIGLGRIGSEVAKRAKAF--GMKVIAYDPYISP-ERAAQLGVELV--SLDELLARADFITLHTPLTP 206 (526)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCCh-hHHHhcCCEEE--cHHHHHhhCCEEEEccCCCh
Confidence 4467899999999999999999998 9999999985432 12223455443 44 47889999998887653
|
|
| >PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.0066 Score=56.01 Aligned_cols=68 Identities=19% Similarity=0.252 Sum_probs=47.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCC---------ce-----eeccCc-cccCCCCEEE
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---------IT-----PSLKWT-EATQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~---------i~-----~~~~D~-~~~~~~D~Vi 147 (268)
.||||.|+|+|.+|..++..|.+. | +|+...|+++..+.+...+ .+ ....|. +.++++|+||
T Consensus 6 ~~mkI~IiGaGa~G~alA~~La~~--g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVi 82 (341)
T PRK12439 6 REPKVVVLGGGSWGTTVASICARR--G-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVV 82 (341)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--C-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEE
Confidence 367999999999999999999998 8 5777788766554443221 11 011233 3578999999
Q ss_pred EccCCC
Q 024417 148 FCAPPS 153 (268)
Q Consensus 148 ~~a~~~ 153 (268)
.+.++.
T Consensus 83 lavps~ 88 (341)
T PRK12439 83 MGVPSH 88 (341)
T ss_pred EEeCHH
Confidence 888764
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.015 Score=52.92 Aligned_cols=85 Identities=11% Similarity=0.038 Sum_probs=55.2
Q ss_pred cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-----hhhhcCCceeeccCccccCCCCEEEEccCCCCCCChHHHH-HHHH
Q 024417 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDV-RLAA 166 (268)
Q Consensus 93 G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-----~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~~~~~~~-~~~~ 166 (268)
=|=|+.+++.|++. ||+|++.+|+.++. +.+...|+.....+.++.+++|+||-|.+... .++.+ ..++
T Consensus 29 p~gGspMArnLlkA--GheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~a---aV~eVl~GLa 103 (341)
T TIGR01724 29 PYGGSRMAIEFAMA--GHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFGK---GTFSIARTII 103 (341)
T ss_pred CCCHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCHH---HHHHHHHHHH
Confidence 46799999999999 99999999876543 23556676654333468899999999988543 12222 2222
Q ss_pred HHhcCCCeEEEEccCe
Q 024417 167 LSWNGEGSFLFTSSSA 182 (268)
Q Consensus 167 ~~~~gvkr~V~~SS~~ 182 (268)
......+-+|-+||+.
T Consensus 104 a~L~~GaIVID~STIs 119 (341)
T TIGR01724 104 EHVPENAVICNTCTVS 119 (341)
T ss_pred hcCCCCCEEEECCCCC
Confidence 1112224566666664
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.064 Score=48.91 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=47.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcc--hhhhcC--Cceeec--cC---ccccCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHH--DELINM--GITPSL--KW---TEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~--~~l~~~--~i~~~~--~D---~~~~~~~D~Vi~~a~~ 152 (268)
|||.|+|+ |.+|+.++..|... + .++..++.+..+. -.|... ...... .| .+.++++|+||.+|+.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~--~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~ 78 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLN--PLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV 78 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence 48999998 99999999999887 6 4888888761111 112221 122221 43 4789999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 79 ~~ 80 (310)
T cd01337 79 PR 80 (310)
T ss_pred CC
Confidence 43
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.067 Score=49.06 Aligned_cols=68 Identities=12% Similarity=0.127 Sum_probs=48.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCC--Ccchh----hhcC------CceeeccCccccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTA--DHHDE----LINM------GITPSLKWTEATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~~--~~~~~----l~~~------~i~~~~~D~~~~~~~D 144 (268)
.||.|+|+ |.+|..++..|... +. ++..+|.++ ++... +... ++.....|.+.++++|
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 81 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASG--ELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDVD 81 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhC--CcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCCC
Confidence 48999998 99999999999887 64 788899854 22211 1111 1222234557899999
Q ss_pred EEEEccCCCC
Q 024417 145 YVIFCAPPSR 154 (268)
Q Consensus 145 ~Vi~~a~~~~ 154 (268)
+||.+|+...
T Consensus 82 vVVitAG~~~ 91 (323)
T TIGR01759 82 AALLVGAFPR 91 (323)
T ss_pred EEEEeCCCCC
Confidence 9999999643
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0084 Score=56.20 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
|.+|+|+|+|.+|..++.+|.+. |++|++++|+.
T Consensus 1 ~~~vvIIGaG~~G~~~A~~La~~--g~~V~vle~~~ 34 (410)
T PRK12409 1 MSHIAVIGAGITGVTTAYALAQR--GYQVTVFDRHR 34 (410)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 56999999999999999999999 99999999874
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.02 Score=52.76 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=28.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~R~ 118 (268)
.++|.|+|+ |++|+.|.+.|.++ +|..++..+...
T Consensus 4 ~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~ 40 (336)
T PRK08040 4 GWNIALLGATGAVGEALLELLAERQFPVGELYALASE 40 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEcc
Confidence 468999997 99999999999875 577788877654
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.018 Score=53.38 Aligned_cols=72 Identities=17% Similarity=0.219 Sum_probs=49.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCCce------eeccCc-cccCCCCEEEEc
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMGIT------PSLKWT-EATQKFPYVIFC 149 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~i~------~~~~D~-~~~~~~D~Vi~~ 149 (268)
....++|.|+|.|-||+.+++.|..- |.+|++.+|...+.... ...... ....++ +.+.++|+|+.+
T Consensus 156 ~l~gktvGIiG~G~IG~~vA~~l~af--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 156 TLFGKTVFILGYGAIGIELAKRLRPF--GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHhhC--CCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 34568999999999999999999998 99999999863321110 000000 011233 478899999988
Q ss_pred cCCCC
Q 024417 150 APPSR 154 (268)
Q Consensus 150 a~~~~ 154 (268)
++.+.
T Consensus 234 lPlt~ 238 (347)
T PLN02928 234 CTLTK 238 (347)
T ss_pred CCCCh
Confidence 87653
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.013 Score=56.87 Aligned_cols=66 Identities=15% Similarity=0.161 Sum_probs=51.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------------------------
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------------------------- 137 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------------------------- 137 (268)
..+++|+|+|.+|...+..++.. |..|+++++++++.+..+..|.+.+..|.
T Consensus 164 ~akVlViGaG~iGl~Aa~~ak~l--GA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 164 PAKVLVIGAGVAGLAAIGAANSL--GAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 46899999999999999999999 99999999988776666556655432211
Q ss_pred -cccCCCCEEEEccC
Q 024417 138 -EATQKFPYVIFCAP 151 (268)
Q Consensus 138 -~~~~~~D~Vi~~a~ 151 (268)
+..+++|+||.++-
T Consensus 242 ~e~~~~~DIVI~Tal 256 (511)
T TIGR00561 242 AAQAKEVDIIITTAL 256 (511)
T ss_pred HHHhCCCCEEEECcc
Confidence 13678999999983
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.023 Score=55.04 Aligned_cols=68 Identities=24% Similarity=0.208 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC----Cceee-c-cCc-c---ccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPS-L-KWT-E---ATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~----~i~~~-~-~D~-~---~~~~~D~Vi~~a~~~ 153 (268)
+++|-++|.|..|+.+++.|+++ |++|++.+|++++.+.+... |...+ . .++ + .++.+|+||.|.+..
T Consensus 6 ~~~IG~IGLG~MG~~mA~nL~~~--G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~ 83 (493)
T PLN02350 6 LSRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAG 83 (493)
T ss_pred CCCEEEEeeHHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCc
Confidence 56899999999999999999999 99999999998887766432 43221 1 223 2 344699999988654
|
|
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.0091 Score=53.19 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=53.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCCcchhh-hcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDEL-INMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~~~~~l-~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
|++|.++|+|.+|+.++.-|++. | .+|++..|++++...+ ...++.. ..|. +...++|+||.+.-|..
T Consensus 1 ~~~IgfIG~G~Mg~Ai~~gl~~~--g~~~~~~I~v~~~~~e~~~~l~~~~g~~~-~~~~~~~~~~advv~LavKPq~ 74 (266)
T COG0345 1 MMKIGFIGAGNMGEAILSGLLKS--GALPPEEIIVTNRSEEKRAALAAEYGVVT-TTDNQEAVEEADVVFLAVKPQD 74 (266)
T ss_pred CceEEEEccCHHHHHHHHHHHhc--CCCCcceEEEeCCCHHHHHHHHHHcCCcc-cCcHHHHHhhCCEEEEEeChHh
Confidence 57899999999999999999998 7 6899999988877533 3445553 3333 57889999999988854
|
|
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0083 Score=53.29 Aligned_cols=68 Identities=19% Similarity=0.196 Sum_probs=43.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc-CCCCeEEEEeCC-CCcchhhhcCCceeeccCccc--cCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQE-HPGCQIYGQTMT-ADHHDELINMGITPSLKWTEA--TQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~-~~G~~V~~~~R~-~~~~~~l~~~~i~~~~~D~~~--~~~~D~Vi~~a~~~ 153 (268)
.+||-|+|+|.||+.++++|.+. .+++++.++.+. +++.+.+... .. ...|.+. ...+|.|+-||++.
T Consensus 2 ~~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~~-~~-~~~~l~~ll~~~~DlVVE~A~~~ 73 (267)
T PRK13301 2 THRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAGR-VA-LLDGLPGLLAWRPDLVVEAAGQQ 73 (267)
T ss_pred ceEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhcc-Cc-ccCCHHHHhhcCCCEEEECCCHH
Confidence 36899999999999999999764 124677666443 3344443322 21 2234433 46788888888764
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.011 Score=60.01 Aligned_cols=67 Identities=16% Similarity=0.321 Sum_probs=51.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchhhhcCCcee-eccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~l~~~~i~~-~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
++|.|+|+|.+|..+++.|++. | ++|++.+|++++.+...+.++.. ...|. +.+.++|+||.+.++.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~--G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~ 74 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRER--GLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVL 74 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhc--CCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHH
Confidence 6899999999999999999998 8 58999999887765554455421 11222 3578999999988864
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.026 Score=55.14 Aligned_cols=69 Identities=14% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|+.- |++|++.++.... +.....+++.. .++ +.++++|+|+.+.+.+.
T Consensus 136 l~gktvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~-~~~~~~g~~~~-~~l~ell~~aDvV~l~lPlt~ 205 (525)
T TIGR01327 136 LYGKTLGVIGLGRIGSIVAKRAKAF--GMKVLAYDPYISP-ERAEQLGVELV-DDLDELLARADFITVHTPLTP 205 (525)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCCh-hHHHhcCCEEc-CCHHHHHhhCCEEEEccCCCh
Confidence 4457899999999999999999998 9999999985322 11223344322 133 57789999998887653
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.033 Score=50.80 Aligned_cols=66 Identities=17% Similarity=0.179 Sum_probs=48.8
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|-||+.+++.+..- |.+|.+.+|..... ..+++. .++ +.++.+|+|+.+++.+.
T Consensus 142 ~L~gktvGIiG~G~IG~~vA~~~~~f--gm~V~~~d~~~~~~----~~~~~~--~~l~ell~~sDvv~lh~Plt~ 208 (311)
T PRK08410 142 EIKGKKWGIIGLGTIGKRVAKIAQAF--GAKVVYYSTSGKNK----NEEYER--VSLEELLKTSDIISIHAPLNE 208 (311)
T ss_pred ccCCCEEEEECCCHHHHHHHHHHhhc--CCEEEEECCCcccc----ccCcee--ecHHHHhhcCCEEEEeCCCCc
Confidence 34568999999999999999999988 99999999853221 112221 233 47889999988877543
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.039 Score=47.06 Aligned_cols=35 Identities=26% Similarity=0.259 Sum_probs=31.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~ 118 (268)
+...+|+|+|+|-+|+++++.|... |. +++.+|.+
T Consensus 19 l~~~~VlviG~GglGs~ia~~La~~--Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LLNSHVLIIGAGGLGSPAALYLAGA--GVGTIVIVDDD 54 (202)
T ss_pred hcCCCEEEECCCHHHHHHHHHHHHc--CCCeEEEecCC
Confidence 4457899999999999999999999 87 88888876
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.014 Score=53.21 Aligned_cols=70 Identities=19% Similarity=0.186 Sum_probs=49.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC----Cceeec-cCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSL-KWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~----~i~~~~-~D~-~~~~~~D~Vi~~a~~~ 153 (268)
-++|+|+|+|..|+..++.+....+..+|++..|++++.+.+... +..... .+. +++.++|+|+.+.+..
T Consensus 125 ~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 125 ASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred CceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 468999999999999999776633467999999998776554322 322222 233 4778999997655543
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.15 Score=48.75 Aligned_cols=70 Identities=10% Similarity=0.172 Sum_probs=49.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-------CCCCeEEEEeCCCCcchh----hhc------CCceeeccCccccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQE-------HPGCQIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~-------~~G~~V~~~~R~~~~~~~----l~~------~~i~~~~~D~~~~~~~D~V 146 (268)
-||.|+|+ |.||.+++-.|... .--.++..+++++++... |.. ..+.....|.+.++++|+|
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~~kdaDiV 180 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEVFQDAEWA 180 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHHhCcCCEE
Confidence 47999998 99999999988754 111378888988765432 111 1222223566899999999
Q ss_pred EEccCCCC
Q 024417 147 IFCAPPSR 154 (268)
Q Consensus 147 i~~a~~~~ 154 (268)
|.+|+...
T Consensus 181 VitAG~pr 188 (444)
T PLN00112 181 LLIGAKPR 188 (444)
T ss_pred EECCCCCC
Confidence 99998643
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.094 Score=48.17 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=47.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCCCc--ch----hhhc------CCceeeccCccccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HD----ELIN------MGITPSLKWTEATQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~~~~--~~----~l~~------~~i~~~~~D~~~~~~~ 143 (268)
+.||.|+|+ |.+|..++..|... +. ++..+|.+++. .. .+.. ..+.....|.+.++++
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~--~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~da 81 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASG--DMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDA 81 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhh--hhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCC
Confidence 569999998 99999999998875 43 78888885421 11 1111 1222233455789999
Q ss_pred CEEEEccCCCC
Q 024417 144 PYVIFCAPPSR 154 (268)
Q Consensus 144 D~Vi~~a~~~~ 154 (268)
|+||.+|+...
T Consensus 82 DiVVitaG~~~ 92 (326)
T PRK05442 82 DVALLVGARPR 92 (326)
T ss_pred CEEEEeCCCCC
Confidence 99999998543
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.014 Score=53.30 Aligned_cols=68 Identities=15% Similarity=0.189 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee-e------------ccCc-cccCCCCEEEEc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-S------------LKWT-EATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~-~------------~~D~-~~~~~~D~Vi~~ 149 (268)
|++|.|+|+|--|..|+..|.+. ||+|+...|+++...++.....+. + ..|. ++++++|+|+..
T Consensus 1 ~~kI~ViGaGswGTALA~~la~n--g~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~a 78 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARN--GHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIA 78 (329)
T ss_pred CceEEEEcCChHHHHHHHHHHhc--CCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEE
Confidence 57899999999999999999999 999999999876655543321111 1 0122 367789999987
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
.+..
T Consensus 79 vPs~ 82 (329)
T COG0240 79 VPSQ 82 (329)
T ss_pred CChH
Confidence 7654
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.076 Score=48.16 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=46.6
Q ss_pred EEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc------CCceeeccCccccCCCCEEEEccCCCC
Q 024417 89 IVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 89 I~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~------~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
|+|+|.||..++..|... +. ++..++++.++... +.. ..++....|.+.++++|+||.+|+...
T Consensus 1 iIGaG~VG~~~a~~l~~~--~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDivVitag~~r 76 (299)
T TIGR01771 1 IIGAGNVGSSTAFALLNQ--GIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYSDCKDADLVVITAGAPQ 76 (299)
T ss_pred CCCcCHHHHHHHHHHHhc--CCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCHHHHCCCCEEEECCCCCC
Confidence 679999999999999887 54 79999987654322 111 123333345678999999999998643
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.043 Score=50.62 Aligned_cols=68 Identities=12% Similarity=0.170 Sum_probs=41.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchhhh---c------C-C-ce-ee--ccCccccCCCCEEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI---N------M-G-IT-PS--LKWTEATQKFPYVIF 148 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~l~---~------~-~-i~-~~--~~D~~~~~~~D~Vi~ 148 (268)
+||.|+|+ |++|++|++.|.++ |..+|.++.... .....+. . . + .. .. ..+.+...++|+|+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~ 79 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFS 79 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEE
Confidence 47999997 99999999988775 457988884332 1111111 0 0 0 11 01 122334578999998
Q ss_pred ccCCC
Q 024417 149 CAPPS 153 (268)
Q Consensus 149 ~a~~~ 153 (268)
+.+..
T Consensus 80 a~p~~ 84 (341)
T TIGR00978 80 ALPSE 84 (341)
T ss_pred eCCHH
Confidence 88664
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.03 Score=51.13 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=29.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
+|.+|.|+|+ |++|..|++.|.++ |..++..+..+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~h-p~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGR-SDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcC-CCeEEEEEecCC
Confidence 3679999997 99999999988776 677888776543
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.025 Score=50.81 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcC-----Cceeec--cCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-----GITPSL--KWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~-----~i~~~~--~D~-~~~~~~D~Vi~~a~~~ 153 (268)
..++++|+|+|-.|+.++..|.+. |. +|+++.|+.++.+.+... .+.... .+. +.+.++|+||++.+..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~--G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASL--GVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHc--CCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 346899999999999999999999 87 799999998777665321 111111 111 3457899999998765
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 202 ~ 202 (282)
T TIGR01809 202 V 202 (282)
T ss_pred C
Confidence 4
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.029 Score=51.46 Aligned_cols=67 Identities=21% Similarity=0.256 Sum_probs=49.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC---CCCcchhhhcCCceeeccCcc------ccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM---TADHHDELINMGITPSLKWTE------ATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R---~~~~~~~l~~~~i~~~~~D~~------~~~~~D~Vi~~a~~ 152 (268)
..+|+|+|+|.+|...++.++.. |.+|++++| ++++.+.+++.|.+.+....+ ...++|+||.+.+.
T Consensus 173 g~~vlI~G~G~vG~~a~q~ak~~--G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 173 PRRALVLGAGPIGLLAALLLRLR--GFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCC
Confidence 35899999999999999988888 999999998 345555556667665421111 23468999999874
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.049 Score=52.49 Aligned_cols=65 Identities=18% Similarity=0.283 Sum_probs=49.4
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC---C--ceeeccCc-c---ccCCCCEEEEccCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---G--ITPSLKWT-E---ATQKFPYVIFCAPPS 153 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~---~--i~~~~~D~-~---~~~~~D~Vi~~a~~~ 153 (268)
+|-|+|.|.+|..+++.|++. |++|++.+|++++.+.+.+. + +... .+. + .++++|+|+.|..+.
T Consensus 1 ~IG~IGLG~MG~~mA~nL~~~--G~~V~v~drt~~~~~~l~~~~~~g~~~~~~-~s~~e~v~~l~~~dvIil~v~~~ 74 (467)
T TIGR00873 1 DIGVIGLAVMGSNLALNMADH--GFTVSVYNRTPEKTDEFLAEHAKGKKIVGA-YSIEEFVQSLERPRKIMLMVKAG 74 (467)
T ss_pred CEEEEeeHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHhhccCCCCceec-CCHHHHHhhcCCCCEEEEECCCc
Confidence 377899999999999999999 99999999998887766543 1 2221 122 2 356799999988764
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.016 Score=45.55 Aligned_cols=66 Identities=27% Similarity=0.371 Sum_probs=40.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEE-EeCCCCcc-----hhhh---cCCceeeccCc-cccCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADHH-----DELI---NMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~-~~R~~~~~-----~~l~---~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+||.|.|+ |.+|+.+++.+.++ +++++.+ ++|+++.. .++. ..++.. ..|. +.+..+|+||....|
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-~~~l~~~~~~~DVvIDfT~p 77 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-TDDLEELLEEADVVIDFTNP 77 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-BS-HHHHTTH-SEEEEES-H
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCCcccccchhhhhhCcCCccccc-chhHHHhcccCCEEEEcCCh
Confidence 48999998 99999999999994 4899775 45654211 1111 112211 1333 356679999987744
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 268 | |||
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 2e-24 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 5e-19 |
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 98.2 bits (245), Expect = 2e-24
Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 18/186 (9%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
+LI G G LG +A + + G ++ G +A + + + +
Sbjct: 6 ILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQPMPAGVQ-TLIADVTRPDTLASIVHL 62
Query: 145 ---YVIFCAPPSRSLD------YPGDVR--LAALSWNGEGSFLFTSSSAIYDCSDNGACD 193
+++C S D Y +R L+AL F SS+ +Y D
Sbjct: 63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLD 122
Query: 194 EDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYKADRGAHVYWLQKGTVDSRPDH 253
ED+P + + +L+AE ++ + +LR +G+Y R + Q +
Sbjct: 123 EDTPPIA--KDFSGKRMLEAEALLAAYSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNA 180
Query: 254 ILNLIH 259
N IH
Sbjct: 181 WTNRIH 186
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 5e-19
Identities = 44/188 (23%), Positives = 69/188 (36%), Gaps = 22/188 (11%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
LL G G R+++ + G +I G + D + + G P L W
Sbjct: 8 LLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEP-LLWPGEEPSLDGV 64
Query: 145 -YVIFCAPPSRSLDYPGDVRLAALSW------NGEGSFLFTSSSAIYDCSDNGACDEDSP 197
+++ P GD LAAL + S++A+Y D DE +P
Sbjct: 65 THLLISTAPDSG----GDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTP 120
Query: 198 VVPIGRSPRTDVLLKAEKVILEFGGC---VLRLAGLYKADRGAHVYWLQKGTVD-SRPDH 253
+ P + R + AE+ V RLAG+Y RG + G +P
Sbjct: 121 LTP--TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQ 178
Query: 254 ILNLIHYE 261
+ + IH E
Sbjct: 179 VFSRIHVE 186
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 268 | |||
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.96 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.95 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.95 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.94 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.94 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.94 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.94 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.94 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.94 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.94 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.94 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.93 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.93 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.93 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.93 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.93 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.92 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.92 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.92 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.92 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.92 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.92 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.92 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.92 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.92 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.91 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.91 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.91 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.91 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.91 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.91 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.91 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.91 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.91 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.91 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.91 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.9 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.9 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.9 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.9 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.9 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.9 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.9 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.9 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.9 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.89 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.89 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.89 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.89 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.89 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.89 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.89 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.88 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.88 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.88 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.88 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.88 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.88 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.88 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.87 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.87 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.86 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.86 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.86 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.86 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.85 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.85 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.85 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.84 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.84 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.84 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.83 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.83 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.83 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.83 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.82 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.82 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.82 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.82 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.81 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.8 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.8 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.77 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.75 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.75 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.75 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.66 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.6 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.56 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.52 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.52 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.51 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.51 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.5 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.49 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.49 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.49 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.47 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.47 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.47 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.46 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.46 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.46 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.46 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.44 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.44 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.43 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.43 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.43 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.43 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.43 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.43 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.41 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.41 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.41 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.41 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.4 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.39 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.39 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.39 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.39 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.39 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.39 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.39 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.38 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.38 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.38 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.38 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.38 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.37 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.37 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.36 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.35 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.35 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.35 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.35 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.35 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.35 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.35 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.34 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.34 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.34 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.33 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.33 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.33 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.33 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.33 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.32 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.32 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.32 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.32 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.31 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.31 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.3 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.3 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.29 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.29 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.29 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.29 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.28 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.28 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.28 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.28 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.28 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.28 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.27 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.27 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.27 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.27 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.27 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.27 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.27 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.27 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.26 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.26 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.26 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.26 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.26 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.26 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.26 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.26 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.25 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.25 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.25 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.25 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.25 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.25 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.25 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.24 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.24 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.24 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.24 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.24 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.24 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.23 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.23 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.23 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.23 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.22 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.22 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.22 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.22 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.22 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.21 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.21 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.21 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.21 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.21 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.21 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.2 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.2 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.2 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.2 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.19 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.19 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.19 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.18 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.18 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.18 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.18 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.17 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.16 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.15 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.15 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.14 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.13 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.13 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.13 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.13 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.12 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.12 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.12 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.11 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.11 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.11 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.1 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.1 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.1 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.1 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.1 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.09 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.09 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.09 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.09 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.09 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.08 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.08 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.08 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.08 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.07 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.07 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.07 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.07 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.06 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.06 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.05 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.05 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.05 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.05 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.02 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.02 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.02 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.02 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.01 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.01 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.0 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.99 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.99 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.98 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.98 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.98 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.98 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.97 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.96 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.96 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.96 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.95 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.94 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.93 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.92 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.9 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.87 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.86 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.82 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.77 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.76 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.69 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.65 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.64 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.6 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.55 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.53 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.52 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.51 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.51 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.48 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.44 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.41 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.36 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.36 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.35 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.34 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.33 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.3 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.27 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.17 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.15 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.14 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.14 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 98.14 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.14 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.11 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 98.1 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.1 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 98.09 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 98.08 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.04 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 98.04 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 98.03 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 98.03 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.03 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 98.02 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 98.01 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 98.0 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.99 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.98 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.98 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 97.98 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.97 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.96 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.95 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.94 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.93 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.93 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.93 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.91 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.91 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.87 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.87 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.85 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.85 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.84 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.84 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.83 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.81 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.81 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.8 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.8 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.79 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.79 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.78 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.78 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.76 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.74 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.74 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.73 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.73 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 97.72 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.72 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.71 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.71 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.7 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.69 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.69 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.69 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 97.69 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.68 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 97.67 | |
| 3ego_A | 307 | Probable 2-dehydropantoate 2-reductase; structural | 97.67 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 97.67 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.67 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.66 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.66 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.65 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.65 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.65 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.65 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.64 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.63 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.63 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.58 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.56 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 97.56 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.55 | |
| 3hn2_A | 312 | 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str | 97.54 | |
| 3hwr_A | 318 | 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A | 97.54 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 97.53 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.53 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 97.51 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.51 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.51 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.49 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.48 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 97.48 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.48 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.48 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.47 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 97.47 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.46 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.46 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 97.45 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.45 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.44 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.43 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.43 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.41 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.4 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.39 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 96.51 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 97.38 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.37 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.36 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 97.36 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.35 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.34 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 97.34 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.34 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 97.34 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.33 | |
| 3g17_A | 294 | Similar to 2-dehydropantoate 2-reductase; structur | 97.33 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 97.33 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.33 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.33 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.31 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.3 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.28 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 97.27 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 97.27 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.26 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.25 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.25 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.25 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 97.25 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 97.24 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.23 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.23 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.21 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.2 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.2 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.19 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.19 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.19 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.19 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.18 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.18 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.17 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.17 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.17 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.16 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.16 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 97.15 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 97.15 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.15 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 97.15 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.15 | |
| 3k6j_A | 460 | Protein F01G10.3, confirmed by transcript evidenc; | 97.15 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 97.14 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 97.13 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.12 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.1 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.09 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.09 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.09 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 97.05 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.05 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.04 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.03 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 97.03 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 97.03 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 97.01 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.01 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.0 | |
| 3c7a_A | 404 | Octopine dehydrogenase; L) stereospecific opine de | 97.0 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.98 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 96.98 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.98 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 96.98 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.97 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.97 | |
| 3eag_A | 326 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME | 96.97 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.96 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 96.95 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 96.95 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 96.94 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.94 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 96.93 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.93 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.89 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 96.87 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.87 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 96.87 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.86 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 96.84 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 96.83 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 96.81 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 96.81 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 96.8 |
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.1e-30 Score=225.74 Aligned_cols=180 Identities=23% Similarity=0.303 Sum_probs=145.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccc--cCCCCEEEEccCCCCCCC-hH
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEA--TQKFPYVIFCAPPSRSLD-YP 159 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~--~~~~D~Vi~~a~~~~~~~-~~ 159 (268)
+||+|||||+||||++|+++|+++ |++|++++|++++...+...+++.+.+|... +.++|+|||+|++....+ ..
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~d~vi~~a~~~~~~~~~~ 81 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVL 81 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEESSSSCCCCTTCCEEEECCCCBTTBCHHH
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEEecccccccCCCCEEEECCCccccccHHH
Confidence 468999999999999999999999 9999999999877766666788888777521 789999999999765432 33
Q ss_pred HHHHHHHHHh-cCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-C--ceEEEeCceecCCC
Q 024417 160 GDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVLRLAGLYKADR 235 (268)
Q Consensus 160 ~~~~~~~~~~-~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-~--~tIlRp~~vyG~~~ 235 (268)
+.+.+.+.+. .++++|||+||.++||...+.+++|+++..|. +.|+.+|+++|++++++ + ++++||+.+||++.
T Consensus 82 ~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~ 159 (286)
T 3ius_A 82 AALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT--AARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPGR 159 (286)
T ss_dssp HHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC--SHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTTB
T ss_pred HHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC--CHHHHHHHHHHHHHHhhcCCCEEEEeccceECCCc
Confidence 3333333222 68999999999999998777789999998887 89999999999999998 5 89999999999986
Q ss_pred cHHHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 236 GAHVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 236 ~~~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
..+. .+.+|.. +..+++.++|||++|+|+++
T Consensus 160 ~~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 192 (286)
T 3ius_A 160 GPFS-KLGKGGIRRIIKPGQVFSRIHVEDIAQVL 192 (286)
T ss_dssp SSST-TSSSSCCCEEECTTCCBCEEEHHHHHHHH
T ss_pred hHHH-HHhcCCccccCCCCcccceEEHHHHHHHH
Confidence 5432 3344543 34457889999999999986
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=214.01 Aligned_cols=178 Identities=14% Similarity=0.058 Sum_probs=139.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc------cccCCCCEEEEccCCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~------~~~~~~D~Vi~~a~~~~~ 155 (268)
|||+|||||+ ||||++|+++|+++ |++|++++|++.... +. +++.+.+|. +.++++|+|||+|+....
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~~~~~~~~~~~~d~Vih~a~~~~~ 75 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN--DYEYRVSDYTLEDLINQLNDVDAVVHLAATRGS 75 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC--------CCEEEECCCCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC--ceEEEEccccHHHHHHhhcCCCEEEEccccCCC
Confidence 3679999996 99999999999999 999999999854443 32 677777775 257899999999997543
Q ss_pred CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C-
Q 024417 156 LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G- 221 (268)
Q Consensus 156 ~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~----~- 221 (268)
.+ .+.+..+++ +++.++++|||+||.++||.....+++|+++..|. +.|+.+|+++|++++++ +
T Consensus 76 ~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~g~ 153 (311)
T 3m2p_A 76 QGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPD--LMYGVSKLACEHIGNIYSRKKGL 153 (311)
T ss_dssp SSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS--SHHHHHHHHHHHHHHHHHHHSCC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcCC
Confidence 21 344555655 35678999999999999997766789999998887 89999999999999874 3
Q ss_pred -ceEEEeCceecCCCc---H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRG---A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~---~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+||++.. . +...+..|.. .+.+++.++|+|++|+|+++
T Consensus 154 ~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~ 209 (311)
T 3m2p_A 154 CIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSV 209 (311)
T ss_dssp EEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHH
T ss_pred CEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHH
Confidence 799999999999764 2 2223455654 36788999999999999986
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-28 Score=216.62 Aligned_cols=175 Identities=21% Similarity=0.274 Sum_probs=141.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----ccCC-CCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----ATQK-FPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~~~-~D~Vi~~a~~~~ 154 (268)
.||+|||||+||||++|+++|+++ |++|++++|++++. ..+++.+.+|. + .+++ +|+|||+|+...
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~ 75 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASE 75 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHH
T ss_pred CCCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCC
Confidence 467999999999999999999999 99999999987653 24666666664 2 3445 999999997532
Q ss_pred C------CChHHHHHHHHH--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-CceEE
Q 024417 155 S------LDYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-GGCVL 225 (268)
Q Consensus 155 ~------~~~~~~~~~~~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-~~tIl 225 (268)
. ..++.+..+++. ++.++++|||+||.++||...+.+++|+++..|. +.|+.+|+++|++ +++ .++++
T Consensus 76 ~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~-~~~~~~~il 152 (286)
T 3gpi_A 76 YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK--DFSGKRMLEAEAL-LAAYSSTIL 152 (286)
T ss_dssp HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC--SHHHHHHHHHHHH-GGGSSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC--ChhhHHHHHHHHH-HhcCCeEEE
Confidence 1 114566777662 3568899999999999998777789999998887 8999999999999 664 48999
Q ss_pred EeCceecCCCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 226 RLAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 226 Rp~~vyG~~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
||+.+||++...+...+.+ .. .+.++..++|||++|+|+++
T Consensus 153 R~~~v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva~~~ 194 (286)
T 3gpi_A 153 RFSGIYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGAAFI 194 (286)
T ss_dssp EECEEEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHHHHH
T ss_pred ecccccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHHHHH
Confidence 9999999987765555555 43 56778999999999999986
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.1e-27 Score=215.29 Aligned_cols=181 Identities=14% Similarity=0.075 Sum_probs=140.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc-------CCceeeccCc-------cccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-------MGITPSLKWT-------EATQKF 143 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~-------~~i~~~~~D~-------~~~~~~ 143 (268)
++|+|||||+ ||||++|+++|+++ |++|++++|....... +.. .+++.+.+|. ++++++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 4689999997 99999999999999 9999999997654321 211 4677777775 257799
Q ss_pred CEEEEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHH
Q 024417 144 PYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (268)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK 210 (268)
|+|||+|+..... + .+.++.+++ +++.++++|||+||.++||.....+++|+++..|. +.|+.+|
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK 179 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPL--SPYAVTK 179 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCC--ChhHHHH
Confidence 9999999974321 1 123344444 24568999999999999998777799999998887 8999999
Q ss_pred HHHHHHHHHc----C--ceEEEeCceecCCCcH----------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 211 LKAEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 211 ~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|++++.+ + ++++||+.+||++... +...+.+|.. .+.+++.++|||++|+|+++
T Consensus 180 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~ 255 (351)
T 3ruf_A 180 YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMN 255 (351)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHH
Confidence 9999998864 3 7999999999997531 1223445543 46788999999999999986
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.4e-26 Score=204.90 Aligned_cols=178 Identities=15% Similarity=0.147 Sum_probs=134.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc------cccCCCCEEEEccCCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRSL- 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~------~~~~~~D~Vi~~a~~~~~~- 156 (268)
|+|||||+ ||||++|+++|+++ |++|++++|.++........+++.+.+|. +.+++ |+|||+|+.....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~~~~ 77 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPEVRL 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCSSSG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCCCchh
Confidence 58999997 99999999999999 99999999987665554455677777765 13445 9999999864321
Q ss_pred ---C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----
Q 024417 157 ---D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---- 220 (268)
Q Consensus 157 ---~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~---- 220 (268)
+ .+.+..+++ +++.++++|||+||.++||.....+++|+.+..|. +.|+.+|+++|++++.+
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~ 155 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPI--SVYGAAKAAGEVMCATYARLF 155 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHh
Confidence 1 123334444 24568999999999999998777789999988887 89999999999998775
Q ss_pred C--ceEEEeCceecCCCcH-----HHHHHHcC-Cc---cCCCCcccCcccHhhHhhcc
Q 024417 221 G--GCVLRLAGLYKADRGA-----HVYWLQKG-TV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ~--~tIlRp~~vyG~~~~~-----~~~~l~~g-~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+++|||+... +...+..+ .. .+.+++.++|+|++|+|+++
T Consensus 156 g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 213 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEAT 213 (312)
T ss_dssp CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHH
T ss_pred CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHH
Confidence 3 7999999999997531 22233333 22 56788999999999999986
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.3e-27 Score=213.93 Aligned_cols=184 Identities=13% Similarity=0.132 Sum_probs=138.0
Q ss_pred CCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCcc--------ccCCCCEEEEc
Q 024417 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTE--------ATQKFPYVIFC 149 (268)
Q Consensus 80 ~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~~--------~~~~~D~Vi~~ 149 (268)
..++||+|||||+ ||||++|+++|+++ +|++|++++|++++...+.. .+++.+.+|.. +++++|+||||
T Consensus 20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~ 98 (372)
T 3slg_A 20 GSMKAKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPL 98 (372)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEEC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEc
Confidence 3456789999996 99999999999986 47999999998877655543 57777776642 46689999999
Q ss_pred cCCCCCC----Ch-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC-------CCCCCCHHHHH
Q 024417 150 APPSRSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-------VPIGRSPRTDV 209 (268)
Q Consensus 150 a~~~~~~----~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~-------~p~~~~~y~~s 209 (268)
|+..... +. +.++.+++ +++.+ ++|||+||.++||.....+++|++++ .|. +.|+.+
T Consensus 99 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~--~~Y~~s 175 (372)
T 3slg_A 99 VAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPR--WIYACS 175 (372)
T ss_dssp BCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTT--HHHHHH
T ss_pred CccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCC--CcHHHH
Confidence 9975421 11 11223343 24456 99999999999998766778888754 333 689999
Q ss_pred HHHHHHHHHHc---C--ceEEEeCceecCCCc-----------H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEF---G--GCVLRLAGLYKADRG-----------A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~---~--~tIlRp~~vyG~~~~-----------~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+++|++++++ + ++|+||+.+||++.. . +...+.+|.. .+.+++.++|||++|+|+++
T Consensus 176 K~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 255 (372)
T 3slg_A 176 KQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISAL 255 (372)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHH
Confidence 99999999887 5 799999999999743 1 1223445553 45678999999999999986
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=203.63 Aligned_cols=179 Identities=16% Similarity=0.124 Sum_probs=131.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc------cccCCCCEEEEccCCCCC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRS- 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~------~~~~~~D~Vi~~a~~~~~- 155 (268)
||+|||||+ ||||++|+++|+++ | +|+++++...........+++.+.+|. +.++++|+|||+|+....
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~~~ 77 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--N-EIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDYLKGAEEVWHIAANPDVR 77 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--S-CEEEECCCSSCCGGGSCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--C-CEEEEEcCCCCChhhcCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCChh
Confidence 679999997 99999999999999 9 555555543332222234566666664 256799999999985432
Q ss_pred ---CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc---
Q 024417 156 ---LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF--- 220 (268)
Q Consensus 156 ---~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~--- 220 (268)
.++ +.+..+++ +++.++++|||+||.++||.....+++|+.+..|. +.|+.+|..+|++++.+
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~~ 155 (313)
T 3ehe_A 78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI--SLYGASKLACEALIESYCHT 155 (313)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHh
Confidence 121 23334444 24568899999999999998777789999988776 89999999999998764
Q ss_pred -C--ceEEEeCceecCCCcH-----HHHHHHcC-Cc---cCCCCcccCcccHhhHhhcc
Q 024417 221 -G--GCVLRLAGLYKADRGA-----HVYWLQKG-TV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 -~--~tIlRp~~vyG~~~~~-----~~~~l~~g-~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+.+||++... +...+.++ .. .+.+++.++|||++|+|+++
T Consensus 156 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 214 (313)
T 3ehe_A 156 FDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAM 214 (313)
T ss_dssp TTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHH
T ss_pred cCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHH
Confidence 3 7999999999997541 22233334 32 57788999999999999986
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.5e-26 Score=203.90 Aligned_cols=182 Identities=14% Similarity=0.025 Sum_probs=134.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~ 155 (268)
||+|||||+ ||||++|+++|+++ |++|++++|++++.+.+...+++.+.+|. ++++++|+|||+|+....
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~ 90 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPS 90 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC------
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcC
Confidence 469999997 99999999999999 99999999988776655555777777775 257899999999986431
Q ss_pred --CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCC-CCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHc-
Q 024417 156 --LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIG--RSPRTDVLLKAEKVILEF- 220 (268)
Q Consensus 156 --~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~-~~~~E~~~~~p~~--~~~y~~sK~~aE~~l~~~- 220 (268)
.+ .+.+..+++ +.+.++++|||+||.++|+.... ...+|+++..|.. .+.|+.+|+++|++++++
T Consensus 91 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~ 170 (342)
T 2x4g_A 91 RPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA 170 (342)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHh
Confidence 11 233445554 23458899999999999986543 1339999888721 289999999999998873
Q ss_pred --C--ceEEEeCceecCCC-c----HHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 221 --G--GCVLRLAGLYKADR-G----AHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 --~--~tIlRp~~vyG~~~-~----~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+.+||++. . .+...+..|.....+++.++|+|++|+|+++
T Consensus 171 ~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 226 (342)
T 2x4g_A 171 RNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL 226 (342)
T ss_dssp HTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred hcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence 3 89999999999975 2 2233455565421277889999999999986
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=206.87 Aligned_cols=178 Identities=16% Similarity=0.088 Sum_probs=134.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC----cchhhhc----CCceeeccCccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HHDELIN----MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~----~~~~l~~----~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||+|||||+ ||||++|+++|+++ |++|++++|+.. ....+.. .+++.+.+|. .++|+|||+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl---~~~d~vi~~a~~~ 80 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDL---SDVRLVYHLASHK 80 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHH---TTEEEEEECCCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeCcc---ccCCEEEECCccC
Confidence 4689999997 99999999999999 999999999765 2222211 2333343443 3899999999865
Q ss_pred CC-------CC---hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-
Q 024417 154 RS-------LD---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (268)
Q Consensus 154 ~~-------~~---~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~- 220 (268)
.. .+ .+.+..+++ +++.++++|||+||.++|+.....+++|+++..|. +.|+.+|+++|++++++
T Consensus 81 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~ 158 (321)
T 3vps_A 81 SVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR--SPYAASKVGLEMVAGAHQ 158 (321)
T ss_dssp CHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC--ChhHHHHHHHHHHHHHHH
Confidence 31 11 233344444 24567999999999999998777799999998887 89999999999999874
Q ss_pred ------CceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 221 ------GGCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ------~~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
.++++||+.+||++... +...+..+.. .+.+++.++|||++|+|+++
T Consensus 159 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~ 220 (321)
T 3vps_A 159 RASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKL 220 (321)
T ss_dssp HSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHH
T ss_pred HHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHH
Confidence 36899999999997542 2223344443 46788999999999999986
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3.1e-26 Score=207.25 Aligned_cols=179 Identities=18% Similarity=0.132 Sum_probs=134.1
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEcc
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCA 150 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a 150 (268)
.....+|+|||||+ ||||++|+++|+++ |++|++++|+++. .+++.+.+|. +.++++|+|||+|
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 33455789999997 99999999999999 9999999998754 3556666664 2578999999999
Q ss_pred CCCCCCC---------hHHHHHHHH--HHhcCCCeEEEEccCeeecC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024417 151 PPSRSLD---------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDC--SDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (268)
Q Consensus 151 ~~~~~~~---------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~--~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l 217 (268)
+...... .+.+..+++ +++.++++|||+||.+|||. ....+++|+++..|. +.|+.+|+.+|+++
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~~~ 163 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN--SPYGLTKLLGEELV 163 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC--ChHHHHHHHHHHHH
Confidence 9765422 123344444 24578999999999999997 455689999998886 89999999999999
Q ss_pred HHc----C--ceEEEeCcee-------------cCCCcH--------------H---HHHHHcCCc---cCCCCcccCc-
Q 024417 218 LEF----G--GCVLRLAGLY-------------KADRGA--------------H---VYWLQKGTV---DSRPDHILNL- 257 (268)
Q Consensus 218 ~~~----~--~tIlRp~~vy-------------G~~~~~--------------~---~~~l~~g~~---~~~g~~~~~~- 257 (268)
+.+ + ++++||+.+| ||+... . ...+..|.. ++.+++.++|
T Consensus 164 ~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 243 (347)
T 4id9_A 164 RFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFR 243 (347)
T ss_dssp HHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCE
T ss_pred HHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCc
Confidence 854 3 7999999999 876321 1 112334543 4567888899
Q ss_pred ---ccHhhHhhcc
Q 024417 258 ---IHYELPSRLQ 267 (268)
Q Consensus 258 ---Ihv~DlA~ai 267 (268)
+|++|+|+++
T Consensus 244 ~~~i~v~Dva~ai 256 (347)
T 4id9_A 244 MHITDTRDMVAGI 256 (347)
T ss_dssp ECEEEHHHHHHHH
T ss_pred cCcEeHHHHHHHH
Confidence 9999999986
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-26 Score=204.78 Aligned_cols=182 Identities=13% Similarity=0.087 Sum_probs=135.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCC--cchhhhc----CCceeeccCc-------cccCC--C
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTAD--HHDELIN----MGITPSLKWT-------EATQK--F 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~--~~~~l~~----~~i~~~~~D~-------~~~~~--~ 143 (268)
..||+|||||+ ||||++|+++|+++ | ++|++++|... ....+.. .+++.+.+|. +++++ +
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 99 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQS--YETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDV 99 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHH--CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTC
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhh--CCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCC
Confidence 34679999997 99999999999999 8 78888888642 2222221 3677777775 13444 9
Q ss_pred CEEEEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCC-CCCCCCCCCCCCCCCCCHHHHH
Q 024417 144 PYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~~~~p~~~~~y~~s 209 (268)
|+|||+|+..... + .+.++.+++ +++.++++|||+||.++|+.. ...+++|+++..|. +.|+.+
T Consensus 100 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~--~~Y~~s 177 (346)
T 4egb_A 100 QVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN--SPYSSS 177 (346)
T ss_dssp CEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC--SHHHHH
T ss_pred CEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC--ChhHHH
Confidence 9999999865322 1 123344554 345689999999999999975 35689999998887 899999
Q ss_pred HHHHHHHHHHc----C--ceEEEeCceecCCCc---H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEF----G--GCVLRLAGLYKADRG---A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~----~--~tIlRp~~vyG~~~~---~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+++|++++++ + ++++||+.+|||+.. . +...+..|.. ++.+++.++|||++|+|+++
T Consensus 178 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 250 (346)
T 4egb_A 178 KASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAI 250 (346)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHH
Confidence 99999999874 3 799999999999753 1 2233455553 46788999999999999986
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-25 Score=204.27 Aligned_cols=180 Identities=13% Similarity=0.082 Sum_probs=137.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHh--cCCCCeEEEEeCCCC-------------cchhhhcCCceeeccCc-------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQ--EHPGCQIYGQTMTAD-------------HHDELINMGITPSLKWT-------E 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~--~~~G~~V~~~~R~~~-------------~~~~l~~~~i~~~~~D~-------~ 138 (268)
+.+|+|||||+ ||||++|+++|++ + |++|++++|... +...+...+++.+.+|. +
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHP--KAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCT--TSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCC--CCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 44689999997 9999999999999 8 999999999654 22223334566777775 1
Q ss_pred c-cCCCCEEEEccCCCCC--CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 139 A-TQKFPYVIFCAPPSRS--LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 139 ~-~~~~D~Vi~~a~~~~~--~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
+ ..++|+|||+|+.... .++ +.++.+++ +++.+++ |||+||.++||.... +++|+++..|. +.|
T Consensus 86 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~--~~Y 161 (362)
T 3sxp_A 86 LEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE--NVY 161 (362)
T ss_dssp HTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS--SHH
T ss_pred hhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC--Chh
Confidence 3 6799999999996542 221 23344444 2455666 999999999997655 89999998887 899
Q ss_pred HHHHHHHHHHHHHcC----ceEEEeCceecCCCcH----------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEFG----GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~~----~tIlRp~~vyG~~~~~----------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|+.+|++++.+. ++++||+++|||+... +...+..|.. ++.+++.++|+|++|+|+++
T Consensus 162 ~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai 239 (362)
T 3sxp_A 162 GFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQAN 239 (362)
T ss_dssp HHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHH
Confidence 999999999999875 7999999999998632 1223445553 36678999999999999986
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.3e-25 Score=199.57 Aligned_cols=173 Identities=16% Similarity=0.079 Sum_probs=127.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCCCC------C
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL------D 157 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~------~ 157 (268)
|||||||+ ||||++|+++|+++ ||+|++++|++.+. .+.+...|.+.++++|+|||+|+..... +
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~~------~~~~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~ 72 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGPG------RITWDELAASGLPSCDAAVNLAGENILNPLRRWNE 72 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTT------EEEHHHHHHHCCCSCSEEEECCCCCSSCTTSCCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCcC------eeecchhhHhhccCCCEEEEeccCcccchhhhhhh
Confidence 68999997 99999999999999 99999999986542 1222222345788999999999753211 1
Q ss_pred ---------hHHHHHHHH--HHhc--CCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc--C-
Q 024417 158 ---------YPGDVRLAA--LSWN--GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF--G- 221 (268)
Q Consensus 158 ---------~~~~~~~~~--~~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~--~- 221 (268)
.++.+++++ .+.. ..++||+.||+++||...+.+++|++|..+. +.|+..+...|...... +
T Consensus 73 ~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~--~~~~~~~~~~e~~~~~~~~~~ 150 (298)
T 4b4o_A 73 TFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF--DFFSNLVTKWEAAARLPGDST 150 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS--SHHHHHHHHHHHHHCCSSSSS
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc--chhHHHHHHHHHHHHhhccCC
Confidence 123334443 1333 3456999999999998878899999998776 67887777777665433 2
Q ss_pred -ceEEEeCceecCCCcHHHH---HHHcCC--ccCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRGAHVY---WLQKGT--VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~~~~~---~l~~g~--~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+||++...+.. ....|. .++.++++++|||++|+|+++
T Consensus 151 ~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~ 202 (298)
T 4b4o_A 151 RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGIL 202 (298)
T ss_dssp EEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHH
T ss_pred ceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHH
Confidence 6999999999998754332 233444 368899999999999999986
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=201.91 Aligned_cols=181 Identities=18% Similarity=0.090 Sum_probs=137.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhh----------cCCceeeccCc-------cccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI----------NMGITPSLKWT-------EATQKF 143 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~----------~~~i~~~~~D~-------~~~~~~ 143 (268)
.||+|||||+ |+||++|+++|+++ |++|++++|++... +.+. ..+++.+.+|. +.++++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 4789999997 99999999999999 99999999976421 1111 24677777775 256799
Q ss_pred CEEEEccCCCCC----CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHH
Q 024417 144 PYVIFCAPPSRS----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (268)
Q Consensus 144 D~Vi~~a~~~~~----~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK 210 (268)
|+|||+|+.... .++ +.+..+++ +.+.++++|||+||.++|+...+.+++|+++..|. +.|+.+|
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~--~~Y~~sK 181 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL--SPYAVTK 181 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHH
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCC--ChhHHHH
Confidence 999999997542 111 22334444 24568899999999999997666789999988776 8999999
Q ss_pred HHHHHHHHHc----C--ceEEEeCceecCCCcH----------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 211 LKAEKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 211 ~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++|++++.+ + ++++||+.+||++... +...+.+|.. .+.+++.++|+|++|+|+++
T Consensus 182 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~ 257 (352)
T 1sb8_A 182 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 257 (352)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence 9999998754 3 7999999999997421 1223445553 46778999999999999875
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=199.43 Aligned_cols=179 Identities=17% Similarity=0.109 Sum_probs=132.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-hhhcCCceeeccCc-------cccC--CCCEEEEccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELINMGITPSLKWT-------EATQ--KFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-~l~~~~i~~~~~D~-------~~~~--~~D~Vi~~a~~ 152 (268)
||+|||||+ ||||++|+++|+++ |++|++++|...... .+. .+++.+.+|. +.++ ++|+|||+|+.
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~ 77 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHEDAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAAD 77 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCchhhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 689999997 99999999999999 999999999754432 222 2566676664 1345 89999999997
Q ss_pred CCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 024417 153 SRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE 219 (268)
Q Consensus 153 ~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~ 219 (268)
.... + .+.+..+++ +++.++++|||+||.++|+.....+++|+++..|. +.|+.+|+++|++++.
T Consensus 78 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~ 155 (330)
T 2c20_A 78 SLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPT--NTYGETKLAIEKMLHW 155 (330)
T ss_dssp CCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCS--SHHHHHHHHHHHHHHH
T ss_pred cCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCC--ChHHHHHHHHHHHHHH
Confidence 5421 1 123344444 24568899999999999997666789999988776 8999999999999876
Q ss_pred c----C--ceEEEeCceecCCC-----------cHHHH---HHHc--CCc---cC------CCCcccCcccHhhHhhcc
Q 024417 220 F----G--GCVLRLAGLYKADR-----------GAHVY---WLQK--GTV---DS------RPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 220 ~----~--~tIlRp~~vyG~~~-----------~~~~~---~l~~--g~~---~~------~g~~~~~~Ihv~DlA~ai 267 (268)
+ + ++++||+.+||++. ..+.. .... +.. ++ .+++.++|||++|+|+++
T Consensus 156 ~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~ 234 (330)
T 2c20_A 156 YSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAH 234 (330)
T ss_dssp HHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHH
T ss_pred HHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHH
Confidence 4 3 79999999999952 11111 1122 221 22 567889999999999986
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.93 E-value=5e-26 Score=194.09 Aligned_cols=177 Identities=13% Similarity=-0.004 Sum_probs=127.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~ 155 (268)
||+|||||+ |+||++|+++|+++ |++|++++|++++...+. .+++.+.+|. +.++++|+|||+|++...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWN 80 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCC
Confidence 689999997 99999999999999 999999999877654432 5677777775 257899999999987533
Q ss_pred CC-----hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--c
Q 024417 156 LD-----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--G 222 (268)
Q Consensus 156 ~~-----~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~----~--~ 222 (268)
.. ......+++ +++.++++|||+||.++|+...+ ...|+.+..|. +.|+.+|...|++++.+ + +
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~~~~~ 157 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-LRLMDSGEVPE--NILPGVKALGEFYLNFLMKEKEIDW 157 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-EEGGGTTCSCG--GGHHHHHHHHHHHHHTGGGCCSSEE
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-CccccCCcchH--HHHHHHHHHHHHHHHHHhhccCccE
Confidence 21 355555655 35668999999999987764333 33456666665 78999999999766554 2 7
Q ss_pred eEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++||+.+||++............+...++ .++|||++|+|+++
T Consensus 158 ~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~ai 201 (227)
T 3dhn_A 158 VFFSPAADMRPGVRTGRYRLGKDDMIVDIV-GNSHISVEDYAAAM 201 (227)
T ss_dssp EEEECCSEEESCCCCCCCEEESSBCCCCTT-SCCEEEHHHHHHHH
T ss_pred EEEeCCcccCCCccccceeecCCCcccCCC-CCcEEeHHHHHHHH
Confidence 999999999997532111111112222233 38999999999986
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-25 Score=202.33 Aligned_cols=181 Identities=16% Similarity=0.072 Sum_probs=135.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~ 154 (268)
+||+|||||+ ||||++|+++|+++ |++|++++|++++...+...+++.+.+|. +.++++|+|||+|+...
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~ 105 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG 105 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecC
Confidence 5789999997 99999999999999 99999999987654443345677777775 25689999999999653
Q ss_pred C-----CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCC-----CCCCCCCC--CCCCCCCCHHHHHHHHH
Q 024417 155 S-----LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-----NGACDEDS--PVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 155 ~-----~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~-----~~~~~E~~--~~~p~~~~~y~~sK~~a 213 (268)
. .++ +.+..+++ +++.++++|||+||.++|+... ..+++|++ +..|. +.|+.+|+++
T Consensus 106 ~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~--~~Y~~sK~~~ 183 (379)
T 2c5a_A 106 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ--DAFGLEKLAT 183 (379)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS--SHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCC--ChhHHHHHHH
Confidence 2 221 22334444 2456889999999999998532 23577877 44454 7999999999
Q ss_pred HHHHHHc----C--ceEEEeCceecCCCcH----------HHHHHHcCC--c--cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF----G--GCVLRLAGLYKADRGA----------HVYWLQKGT--V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~----~--~tIlRp~~vyG~~~~~----------~~~~l~~g~--~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++++ + ++++||+.+||++... +...+.++. + ++.+++.++|+|++|+|+++
T Consensus 184 E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai 257 (379)
T 2c5a_A 184 EELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 257 (379)
T ss_dssp HHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHH
Confidence 9998764 3 7999999999996431 122333443 2 46778899999999999986
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-25 Score=197.26 Aligned_cols=180 Identities=16% Similarity=0.144 Sum_probs=134.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeeccCc---c----ccC--CCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----ATQ--KFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~~D~---~----~~~--~~D~V 146 (268)
+|+|||||+ |+||++|+++|+++ |++|++++|+.+...... ..+++.+.+|. + .++ ++|+|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 468999996 99999999999999 999999999866543221 23566677765 1 333 89999
Q ss_pred EEccCCCCCCC-----------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 147 IFCAPPSRSLD-----------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 147 i~~a~~~~~~~-----------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
||+|+...... .+.+..+++ +++.++++|||+||.++||.....+++|+.+..|. +.|+.+|+.+
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~--~~Y~~sK~~~ 160 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSAT--NPYGQTKLMA 160 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCS--SHHHHHHHHH
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCC--ChhHHHHHHH
Confidence 99999754211 123334444 24568899999999999998777789999998876 8999999999
Q ss_pred HHHHHHc-----C--ceEEEeCceecCCC------------cHH---HHHHHcC--Cc---cC------CCCcccCcccH
Q 024417 214 EKVILEF-----G--GCVLRLAGLYKADR------------GAH---VYWLQKG--TV---DS------RPDHILNLIHY 260 (268)
Q Consensus 214 E~~l~~~-----~--~tIlRp~~vyG~~~------------~~~---~~~l~~g--~~---~~------~g~~~~~~Ihv 260 (268)
|++++.+ + ++++||+++||++. ..+ ......+ .. ++ .+++.++|||+
T Consensus 161 e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v 240 (341)
T 3enk_A 161 EQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHV 240 (341)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred HHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEH
Confidence 9998764 2 69999999999853 111 1122222 21 23 67899999999
Q ss_pred hhHhhcc
Q 024417 261 ELPSRLQ 267 (268)
Q Consensus 261 ~DlA~ai 267 (268)
+|+|+++
T Consensus 241 ~Dva~a~ 247 (341)
T 3enk_A 241 VDLARGH 247 (341)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999975
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.5e-25 Score=200.80 Aligned_cols=181 Identities=13% Similarity=0.094 Sum_probs=127.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcc-hhhh-cCCceeeccCc-------cccCCCCEEEEccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH-DELI-NMGITPSLKWT-------EATQKFPYVIFCAP 151 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~-~~l~-~~~i~~~~~D~-------~~~~~~D~Vi~~a~ 151 (268)
.||+|||||+ |+||++|+++|+++ | ++|++++|+.+.. +.+. ..+++.+.+|. ++++++|+|||+|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 4679999997 99999999999999 9 9999999976543 2222 34677777764 25679999999999
Q ss_pred CCCCC----C-------hHHHHHHHH--HHhc-CCCeEEEEccCeeecCCCCCCCC--CCC---CC-CCCCCCHHHHHHH
Q 024417 152 PSRSL----D-------YPGDVRLAA--LSWN-GEGSFLFTSSSAIYDCSDNGACD--EDS---PV-VPIGRSPRTDVLL 211 (268)
Q Consensus 152 ~~~~~----~-------~~~~~~~~~--~~~~-gvkr~V~~SS~~vYg~~~~~~~~--E~~---~~-~p~~~~~y~~sK~ 211 (268)
..... + .+.+..+++ +++. ++++|||+||.++||...+.+++ |++ +. .|. +.|+.+|+
T Consensus 109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~--~~Y~~sK~ 186 (377)
T 2q1s_A 109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND--SPYSMSKI 186 (377)
T ss_dssp CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCC--SHHHHHHH
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCC--CchHHHHH
Confidence 75421 1 123344444 2345 78999999999999976555788 887 65 565 79999999
Q ss_pred HHHHHHHHc----C--ceEEEeCceecCCC---------c------H-H---HHHHHcCCc---cCCCCcccCcccHhhH
Q 024417 212 KAEKVILEF----G--GCVLRLAGLYKADR---------G------A-H---VYWLQKGTV---DSRPDHILNLIHYELP 263 (268)
Q Consensus 212 ~aE~~l~~~----~--~tIlRp~~vyG~~~---------~------~-~---~~~l~~g~~---~~~g~~~~~~Ihv~Dl 263 (268)
++|++++++ + ++++||+.+||++. . . . ...+.+|.. .+.+++.++|||++|+
T Consensus 187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv 266 (377)
T 2q1s_A 187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV 266 (377)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence 999998764 3 79999999999976 2 1 1 223445553 3567899999999999
Q ss_pred hhc-c
Q 024417 264 SRL-Q 267 (268)
Q Consensus 264 A~a-i 267 (268)
|++ +
T Consensus 267 a~a~i 271 (377)
T 2q1s_A 267 ANGLI 271 (377)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 998 5
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=8.3e-25 Score=198.78 Aligned_cols=180 Identities=14% Similarity=0.115 Sum_probs=132.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----cCCceeeccCc---c----ccC--CCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMGITPSLKWT---E----ATQ--KFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----~~~i~~~~~D~---~----~~~--~~D~Vi~ 148 (268)
+|+|||||+ ||||++|+++|+++ |++|++++|++++...+. ..+++.+.+|. + .++ ++|+|||
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 578999997 99999999999999 999999999876543332 23566777765 1 344 4899999
Q ss_pred ccCCCCC----CCh-------HHHHHHHH--HHhcC-CCeEEEEccCeeecCCCC-CCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 149 CAPPSRS----LDY-------PGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 149 ~a~~~~~----~~~-------~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~-~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
+|+.... .++ +.+..+++ +.+.+ +++|||+||.++||.... .+++|+++..|. +.|+.+|+.+
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~--~~Y~~sK~~~ 164 (357)
T 1rkx_A 87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY--DPYSNSKGCA 164 (357)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--SHHHHHHHHH
T ss_pred CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC--CccHHHHHHH
Confidence 9985321 111 22233343 12334 899999999999997543 478888887776 8999999999
Q ss_pred HHHHHHc-------------C--ceEEEeCceecCCCc----HH---HHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF-------------G--GCVLRLAGLYKADRG----AH---VYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~-------------~--~tIlRp~~vyG~~~~----~~---~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++.+ + ++++||+.+|||+.. .+ ...+.+|.. +..+++.++|||++|+|+++
T Consensus 165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~ 242 (357)
T 1rkx_A 165 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGY 242 (357)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHH
T ss_pred HHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHH
Confidence 9988764 4 799999999999752 22 223445654 45677899999999999875
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.4e-25 Score=196.36 Aligned_cols=178 Identities=13% Similarity=0.121 Sum_probs=133.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----ccC--CCCEEEEccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----ATQ--KFPYVIFCAP 151 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~~--~~D~Vi~~a~ 151 (268)
.++++|||||+ |+||++|+++|+++ |++|++++|+++. ..+ +++.+.+|. + +++ ++|+|||+|+
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~l---~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA-KLP---NVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC-CCT---TEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cCcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc-ccc---eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 35789999997 99999999999999 9999999998665 222 566666664 1 344 3999999999
Q ss_pred CCCC----CCh-------HHHHHHHH--HHh-cCCCeEEEEccCeeecCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 024417 152 PSRS----LDY-------PGDVRLAA--LSW-NGEGSFLFTSSSAIYDCS--DNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (268)
Q Consensus 152 ~~~~----~~~-------~~~~~~~~--~~~-~gvkr~V~~SS~~vYg~~--~~~~~~E~~~~~p~~~~~y~~sK~~aE~ 215 (268)
.... +++ +.+..+++ +.+ .++++|||+||.++|+.. ...+++|+++..|. +.|+.+|+++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~ 161 (321)
T 2pk3_A 84 KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPM--SPYGVSKASVGM 161 (321)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC--SHHHHHHHHHHH
T ss_pred ccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC--CccHHHHHHHHH
Confidence 7542 121 23344444 123 368999999999999875 45689999988776 899999999999
Q ss_pred HHHHc----C--ceEEEeCceecCCCcH------HHHHHHc---C--Cc---cCCCCcccCcccHhhHhhcc
Q 024417 216 VILEF----G--GCVLRLAGLYKADRGA------HVYWLQK---G--TV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 216 ~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~---g--~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++.+ + ++++||+++|||+... +...+.+ | +. .+.++..++|+|++|+|+++
T Consensus 162 ~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~ 233 (321)
T 2pk3_A 162 LARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAY 233 (321)
T ss_dssp HHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHH
Confidence 98876 4 7999999999997642 1222333 5 22 46678899999999999986
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=196.59 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=133.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC--cchh---hhcCCceeeccCc-------cccCCCCEEEEcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDE---LINMGITPSLKWT-------EATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~--~~~~---l~~~~i~~~~~D~-------~~~~~~D~Vi~~a 150 (268)
||+|||||+ ||||++|+++|+++.+|++|++++|... ..+. +...+++.+.+|. ++++++|+|||+|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 689999996 9999999999999845789999999653 1222 2223566776764 2578899999999
Q ss_pred CCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCC------------CCCCCCCCCCCCCCCH
Q 024417 151 PPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDN------------GACDEDSPVVPIGRSP 205 (268)
Q Consensus 151 ~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~------------~~~~E~~~~~p~~~~~ 205 (268)
+..... + .+.++.+++ +...++ +|||+||.++||.... .+++|+++..|. +.
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~--~~ 160 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS--SP 160 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC--SH
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCC--Cc
Confidence 975421 1 122344444 233466 9999999999986422 578999887776 89
Q ss_pred HHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc---H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~---~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|+.+|++++.+ + ++++||+.+||++.. . +...+.+|.. .+.+++.++|+|++|+|+++
T Consensus 161 Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 237 (348)
T 1oc2_A 161 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHH
Confidence 999999999998765 3 799999999999753 1 1223344543 36778899999999999876
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-25 Score=195.29 Aligned_cols=167 Identities=17% Similarity=0.172 Sum_probs=126.6
Q ss_pred CC-eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----cccC--CCCEEEEccCCCCC
Q 024417 84 EN-DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~-kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~~--~~D~Vi~~a~~~~~ 155 (268)
|+ +|||||+ |+||++|+++|+++ |++|++++|..... .|. +.++ ++|+|||+|+....
T Consensus 4 M~m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~D~------------~d~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 4 MKERVIITGANGQLGKQLQEELNPE--EYDIYPFDKKLLDI------------TNISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp -CEEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTTTSCT------------TCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred ceeEEEEECCCCHHHHHHHHHHHhC--CCEEEEecccccCC------------CCHHHHHHHHHhcCCCEEEECCcccCh
Confidence 55 9999997 99999999999999 99999999943221 121 2333 79999999997642
Q ss_pred ----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 156 ----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 156 ----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
.+ .+.+..+++ +++.++ ||||+||.++|+...+.+++|+++..|. +.|+.+|+++|++++++.
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~ 146 (287)
T 3sc6_A 70 DQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPI--NIYGASKYAGEQFVKELHN 146 (287)
T ss_dssp HHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCS
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHhCC
Confidence 11 122334444 234566 7999999999998777899999998887 899999999999999886
Q ss_pred -ceEEEeCceecCCCcHHHH----HHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRGAHVY----WLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~~~~~----~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+|||+...+.. .+..+.. ...+++.++|+|++|+|+++
T Consensus 147 ~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 198 (287)
T 3sc6_A 147 KYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMI 198 (287)
T ss_dssp SEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred CcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence 8999999999996543222 2334543 23356899999999999986
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.6e-24 Score=194.69 Aligned_cols=181 Identities=13% Similarity=0.088 Sum_probs=131.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhh----cCCceeeccCc--cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI----NMGITPSLKWT--EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~----~~~i~~~~~D~--~~~~~~D~Vi~~a~~~ 153 (268)
+.||+|||||+ ||||++|+++|+++ |++|++++|..... ..+. ..+++.+.+|. ..+.++|+|||+|+..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPA 102 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEEECcccc
Confidence 45789999997 99999999999999 99999999975432 1111 23566666765 3567899999999875
Q ss_pred CC----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC-----CCCCCCCCHHHHHHHHHHH
Q 024417 154 RS----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEK 215 (268)
Q Consensus 154 ~~----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~-----~~~p~~~~~y~~sK~~aE~ 215 (268)
.. .+ .+.+..+++ +.+.++ +|||+||.++||.....+++|+. +..|. +.|+.+|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~--~~Y~~sK~~~E~ 179 (343)
T 2b69_A 103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR--ACYDEGKRVAET 179 (343)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT--HHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCC--CchHHHHHHHHH
Confidence 42 11 123344444 234465 99999999999976666788873 44444 689999999999
Q ss_pred HHHHc----C--ceEEEeCceecCCCc-----H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 216 VILEF----G--GCVLRLAGLYKADRG-----A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 216 ~l~~~----~--~tIlRp~~vyG~~~~-----~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++++ + ++++||+.+||++.. . +...+.++.. ++.+++.++|+|++|+|+++
T Consensus 180 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 248 (343)
T 2b69_A 180 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248 (343)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence 98754 3 799999999999642 1 1223334443 46778999999999999886
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=194.41 Aligned_cols=180 Identities=17% Similarity=0.047 Sum_probs=133.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc--hhhh----cCCceeeccCc---c----ccC--CCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELI----NMGITPSLKWT---E----ATQ--KFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~--~~l~----~~~i~~~~~D~---~----~~~--~~D~Vi 147 (268)
+++|||||+ ||||++|+++|+++ |++|++++|++++. ..+. ..+++.+.+|. + .++ ++|+||
T Consensus 14 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vi 91 (335)
T 1rpn_A 14 TRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVY 91 (335)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEE
Confidence 679999997 99999999999999 99999999986542 1121 23466666664 1 334 479999
Q ss_pred EccCCCCC----CCh-------HHHHHHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 148 FCAPPSRS----LDY-------PGDVRLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 148 ~~a~~~~~----~~~-------~~~~~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
|+|+.... .++ +.+..+++ +.+.++ ++|||+||.++|+.....+++|+++..|. +.|+.+|+++
T Consensus 92 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~ 169 (335)
T 1rpn_A 92 NLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--SPYGVAKLYG 169 (335)
T ss_dssp ECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHH
T ss_pred ECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC--ChhHHHHHHH
Confidence 99997542 121 12334444 234565 89999999999997666689999998886 8999999999
Q ss_pred HHHHHHc----C--ceEEEeCceecCCCcH------HH---HHHHcCC-c---cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF----G--GCVLRLAGLYKADRGA------HV---YWLQKGT-V---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~----~--~tIlRp~~vyG~~~~~------~~---~~l~~g~-~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++++ + ++++||+++|||+... +. ..+..|. . ++.+++.++|||++|+|+++
T Consensus 170 e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~ 242 (335)
T 1rpn_A 170 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM 242 (335)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHH
Confidence 9998765 3 7999999999996431 11 1234554 2 46778999999999999986
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.6e-25 Score=194.04 Aligned_cols=171 Identities=10% Similarity=-0.016 Sum_probs=124.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccC--CCCEEEEccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQ--KFPYVIFCAP 151 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~--~~D~Vi~~a~ 151 (268)
++||+|||||+ ||||++|+++|+++ |+ +..... .+++.+.+|. +.++ ++|+|||+|+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~------~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~ 70 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADG--AG------LPGEDW-----VFVSSKDADLTDTAQTRALFEKVQPTHVIHLAA 70 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTT--TC------CTTCEE-----EECCTTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhc--CC------cccccc-----cccCceecccCCHHHHHHHHhhcCCCEEEECce
Confidence 45789999997 99999999999999 87 211111 1223333443 1344 4999999999
Q ss_pred CCCC-----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC----CCCCCCCC-HHHHHHHH
Q 024417 152 PSRS-----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRS-PRTDVLLK 212 (268)
Q Consensus 152 ~~~~-----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----~~~p~~~~-~y~~sK~~ 212 (268)
.... .+ .+.+..+++ +++.++++|||+||.++||.....+++|++ ++.|. + +|+.+|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~--~~~Y~~sK~~ 148 (319)
T 4b8w_A 71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNS--NFGYSYAKRM 148 (319)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSS--SHHHHHHHHH
T ss_pred ecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCC--cchHHHHHHH
Confidence 7531 11 233444554 346689999999999999987777899997 55554 4 69999999
Q ss_pred HHHHHHHc----C--ceEEEeCceecCCCcH----------HHHH----HHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 213 AEKVILEF----G--GCVLRLAGLYKADRGA----------HVYW----LQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 213 aE~~l~~~----~--~tIlRp~~vyG~~~~~----------~~~~----l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|++++.+ + ++++||+.+|||+..+ +... +..|.. .+.+++.++|||++|+|+++
T Consensus 149 ~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 226 (319)
T 4b8w_A 149 IDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF 226 (319)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence 99998764 3 7999999999997531 1222 445553 46788999999999999986
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-24 Score=191.53 Aligned_cols=181 Identities=17% Similarity=0.162 Sum_probs=134.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCC---CeEEEEeCCCC--cchhhh----cCCceeeccCc-------cccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQE-HPG---CQIYGQTMTAD--HHDELI----NMGITPSLKWT-------EATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~-~~G---~~V~~~~R~~~--~~~~l~----~~~i~~~~~D~-------~~~~~~D~V 146 (268)
|+|||||+ |+||++|+++|+++ .+| ++|++++|... ..+.+. ..+++.+.+|. +.+.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 48999996 99999999999984 446 99999999642 222222 13566676764 246899999
Q ss_pred EEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 147 IFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 147 i~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
||+|+....+ + .+.+..+++ +...++++|||+||.++||...+.+++|+++..|. +.|+.+|+++
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~ 158 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN--SPYAASKAGS 158 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC--SHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCC--CchHHHHHHH
Confidence 9999975421 1 123344444 24568899999999999997655688999887776 8999999999
Q ss_pred HHHHHHc----C--ceEEEeCceecCCCc---H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF----G--GCVLRLAGLYKADRG---A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~----~--~tIlRp~~vyG~~~~---~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++.+ + ++++||+.+||++.. . +...+.++.. ++.+++.++|+|++|+|+++
T Consensus 159 e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 227 (337)
T 1r6d_A 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227 (337)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHH
Confidence 9998764 3 799999999999753 1 1223445543 36778899999999999886
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.4e-24 Score=192.08 Aligned_cols=180 Identities=14% Similarity=0.118 Sum_probs=130.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCC--cchhhh----cCCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTAD--HHDELI----NMGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~--~~~~l~----~~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
+|+|||||+ ||||++|+++|+++ | ++|++++|... ..+.+. ..+++.+.+|. +++.++|+||
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~--g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 80 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEK--HPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVV 80 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--CTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHh--CCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEE
Confidence 368999996 99999999999999 6 89999998642 222222 23566666664 2457899999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
|+|+....+ + .+.+..+++ +...+. ++|||+||.++||.....+++|+++..|. +.|+.+|+++
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~ 158 (336)
T 2hun_A 81 HLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPS--SPYSATKAAS 158 (336)
T ss_dssp ECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCC--SHHHHHHHHH
T ss_pred ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCC--CccHHHHHHH
Confidence 999975321 1 123344444 123343 79999999999997656689999887776 8999999999
Q ss_pred HHHHHHc----C--ceEEEeCceecCCCc---H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF----G--GCVLRLAGLYKADRG---A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~----~--~tIlRp~~vyG~~~~---~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++++ + ++++||+.+||++.. . +...+.+|.. ++.+++.++|+|++|+|+++
T Consensus 159 e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 227 (336)
T 2hun_A 159 DMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAI 227 (336)
T ss_dssp HHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHH
Confidence 9998764 3 799999999999753 1 1223445543 36678889999999999886
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=191.30 Aligned_cols=178 Identities=17% Similarity=0.146 Sum_probs=130.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCc---c----ccC--CCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT---E----ATQ--KFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~---~----~~~--~~D~Vi~~a~~~ 153 (268)
|+|||||+ |+||++|+++|+++ |++|++++|.... ...+ ..+++.+.+|. + +++ ++|+|||+|+..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~ 77 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATGKRENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSCCGGGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcCchhhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc
Confidence 48999997 99999999999999 9999999985432 2222 13556666664 1 344 799999999875
Q ss_pred CCC----Ch-------HHHHHHHH--HHhcCCCeEEEEccC-eeecC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024417 154 RSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSS-AIYDC-SDNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 154 ~~~----~~-------~~~~~~~~--~~~~gvkr~V~~SS~-~vYg~-~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~ 218 (268)
... ++ +.+..+++ +.+.++++|||+||. ++||. ....+++|+++..|. +.|+.+|+++|++++
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~ 155 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK--SPYAASKAAFEHYLS 155 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC--SHHHHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC--ChHHHHHHHHHHHHH
Confidence 321 11 12333443 245678999999999 99986 445578999887776 799999999999987
Q ss_pred Hc----C--ceEEEeCceecCCCcH-----H----HHHHHcCCc---c-----CCCCcccCcccHhhHhhcc
Q 024417 219 EF----G--GCVLRLAGLYKADRGA-----H----VYWLQKGTV---D-----SRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 219 ~~----~--~tIlRp~~vyG~~~~~-----~----~~~l~~g~~---~-----~~g~~~~~~Ihv~DlA~ai 267 (268)
.+ + ++++||+++|||+... . ...+.+|.. + +.+++.++|+|++|+|+++
T Consensus 156 ~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 227 (311)
T 2p5y_A 156 VYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAH 227 (311)
T ss_dssp HHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHH
T ss_pred HHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHH
Confidence 54 3 7999999999997421 1 223344543 3 5677889999999999875
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.1e-24 Score=189.19 Aligned_cols=174 Identities=12% Similarity=0.126 Sum_probs=123.9
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcc--hhhhcCCceeeccCc-------cccC-----CCCEEEEc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT-------EATQ-----KFPYVIFC 149 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~--~~l~~~~i~~~~~D~-------~~~~-----~~D~Vi~~ 149 (268)
+|||||+ |+||++|+++|+++ | ++|++++|.+... ..+. +++ +.+|. +.++ ++|+|||+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE 75 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHC--CCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccCCCcEEEEC
Confidence 5899997 99999999999999 9 9999999976542 2222 222 33332 1344 49999999
Q ss_pred cCCCCC--CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024417 150 APPSRS--LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 150 a~~~~~--~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~ 218 (268)
|+.... .+ .+.+..+++ +.+.++ +|||+||.++||.....+++|+++..|. +.|+.+|+++|++++
T Consensus 76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~e~~~~ 152 (310)
T 1eq2_A 76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVYGYSKFLFDEYVR 152 (310)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS--SHHHHHHHHHHHHHH
T ss_pred cccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC--ChhHHHHHHHHHHHH
Confidence 987542 12 123344544 234578 9999999999997665689999988776 899999999999998
Q ss_pred Hc----C--ceEEEeCceecCCCc-------H---HHHHHHcCCc---cCCCCc-ccCcccHhhHhhcc
Q 024417 219 EF----G--GCVLRLAGLYKADRG-------A---HVYWLQKGTV---DSRPDH-ILNLIHYELPSRLQ 267 (268)
Q Consensus 219 ~~----~--~tIlRp~~vyG~~~~-------~---~~~~l~~g~~---~~~g~~-~~~~Ihv~DlA~ai 267 (268)
++ + ++++||+.+||++.. . +...+.+|.. .+.+++ .++|+|++|+|+++
T Consensus 153 ~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~ 221 (310)
T 1eq2_A 153 QILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN 221 (310)
T ss_dssp HHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHH
T ss_pred HHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHH
Confidence 75 2 799999999999753 1 1223445553 456678 89999999999986
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=191.98 Aligned_cols=180 Identities=11% Similarity=0.084 Sum_probs=132.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccC--CCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQ--KFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~--~~D~Vi~~a~~~ 153 (268)
+|+|||||+ ||||++|+++|+++++|++|++++|++.+.. +. .+++.+.+|. +.++ ++|+|||+|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-NSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-HSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-CCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 468999997 9999999999988634799999999866532 21 2456666664 1344 899999999874
Q ss_pred CC---CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024417 154 RS---LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 154 ~~---~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~-~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
.. .+ .+.+..+++ +++.++++|||+||.++|+... ..+.+|+.+..|. +.|+.+|+++|++++.+
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~ 157 (312)
T 2yy7_A 80 SATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS--TVYGISKQAGERWCEYY 157 (312)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC--SHHHHHHHHHHHHHHHH
T ss_pred CCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC--chhHHHHHHHHHHHHHH
Confidence 31 11 123344444 2456889999999999998743 3578898887776 89999999999998764
Q ss_pred ----C--ceEEEeCceecCCC----c---HHH----HHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 221 ----G--GCVLRLAGLYKADR----G---AHV----YWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ----~--~tIlRp~~vyG~~~----~---~~~----~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+.+||++. . ... ..+..+.+ ++.+++.++|+|++|+|+++
T Consensus 158 ~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 223 (312)
T 2yy7_A 158 HNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDAT 223 (312)
T ss_dssp HHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHH
T ss_pred HHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHH
Confidence 3 79999999999642 1 111 12344543 46778899999999999876
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=192.57 Aligned_cols=181 Identities=15% Similarity=0.135 Sum_probs=131.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc--------cccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT--------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~--------~~~~~~D~Vi~~a~~~~ 154 (268)
|+|||||+ ||||++|+++|+++ +|++|++++|++++...+. ..+++.+.+|. +.++++|+|||+|+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~ 79 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT 79 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS-TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence 48999997 99999999999986 3799999999876654432 24667766664 13468999999998654
Q ss_pred CC----Ch-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC---CC--CCCHHHHHHHHHHHH
Q 024417 155 SL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV---PI--GRSPRTDVLLKAEKV 216 (268)
Q Consensus 155 ~~----~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~---p~--~~~~y~~sK~~aE~~ 216 (268)
.. +. +.+..+++ +.+.+ ++|||+||.++||.....+++|+++.. |. ..+.|+.+|+.+|++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~ 158 (345)
T 2bll_A 80 PIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV 158 (345)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHH
Confidence 21 11 12333443 23456 899999999999976666788887642 21 124899999999999
Q ss_pred HHHc----C--ceEEEeCceecCCCc-----------H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 217 ILEF----G--GCVLRLAGLYKADRG-----------A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 217 l~~~----~--~tIlRp~~vyG~~~~-----------~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++.+ + ++++||+.+||++.. . +...+.+|.. .+.+++.++|+|++|+|+++
T Consensus 159 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 232 (345)
T 2bll_A 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 232 (345)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHH
Confidence 8754 3 799999999999742 1 1223344543 45678899999999999986
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=9e-24 Score=190.92 Aligned_cols=180 Identities=14% Similarity=0.078 Sum_probs=131.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc----------chhhh---cCCceeeccCc---c----ccC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----------HDELI---NMGITPSLKWT---E----ATQ- 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~----------~~~l~---~~~i~~~~~D~---~----~~~- 141 (268)
+|+|||||+ |+||++|+++|+++ |++|++++|.... .+.+. ..+++.+.+|. + +++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh
Confidence 478999996 99999999999999 9999999986432 11121 23566676764 1 344
Q ss_pred -CCCEEEEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC-CCCCHH
Q 024417 142 -KFPYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP-IGRSPR 206 (268)
Q Consensus 142 -~~D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p-~~~~~y 206 (268)
++|+|||+|+..... + .+.+..+++ +++.++++|||+||.++||.....+++|+++..| . +.|
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~--~~Y 157 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT--NPY 157 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS--SHH
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCC--Cch
Confidence 799999999975321 1 123334444 2456889999999999999766678999998777 4 799
Q ss_pred HHHHHHHHHHHHHc-------CceEEEeCceecCCC------------cHHH----HHHH-cCCc---cC------CCCc
Q 024417 207 TDVLLKAEKVILEF-------GGCVLRLAGLYKADR------------GAHV----YWLQ-KGTV---DS------RPDH 253 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~~tIlRp~~vyG~~~------------~~~~----~~l~-~g~~---~~------~g~~ 253 (268)
+.+|+++|++++.+ .++++||+++||++. ..+. ..+. ++.. ++ .+++
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 237 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTG 237 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCce
Confidence 99999999998763 279999999999842 1111 1222 3432 22 5678
Q ss_pred ccCcccHhhHhhcc
Q 024417 254 ILNLIHYELPSRLQ 267 (268)
Q Consensus 254 ~~~~Ihv~DlA~ai 267 (268)
.++|||++|+|+++
T Consensus 238 ~~~~i~v~Dva~a~ 251 (348)
T 1ek6_A 238 VRDYIHVVDLAKGH 251 (348)
T ss_dssp EECEEEHHHHHHHH
T ss_pred EEeeEEHHHHHHHH
Confidence 89999999999875
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-24 Score=188.87 Aligned_cols=169 Identities=12% Similarity=0.121 Sum_probs=126.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----cccC--CCCEEEEccCCCCC--
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS-- 155 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~~--~~D~Vi~~a~~~~~-- 155 (268)
|+|||||+ ||||++|+++|+ + |++|++++|++.. +.....|. +.++ ++|+|||+|+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~--------~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~ 69 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSKE--------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDK 69 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCSS--------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEecccccc--------ccccCCCHHHHHHHHHhcCCCEEEECcccCCHhh
Confidence 48999997 999999999999 8 9999999997621 11111222 2344 49999999987541
Q ss_pred --CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--c
Q 024417 156 --LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (268)
Q Consensus 156 --~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~ 222 (268)
.+. +.+..+++ +++.++ ||||+||.++|+...+.+++|+++..|. +.|+.+|+++|++++++. +
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~ 146 (299)
T 1n2s_A 70 AESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPKH 146 (299)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSSE
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc--cHHHHHHHHHHHHHHHhCCCe
Confidence 121 23344554 234466 8999999999998766689999988886 899999999999999876 8
Q ss_pred eEEEeCceecCCCc-HH---HHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRG-AH---VYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~-~~---~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++||+.+||++.. .. ...+..+.. ...+++.++|+|++|+|+++
T Consensus 147 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 196 (299)
T 1n2s_A 147 LIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCT 196 (299)
T ss_dssp EEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred EEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHH
Confidence 99999999999754 22 223344553 23356899999999999876
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=191.71 Aligned_cols=180 Identities=16% Similarity=0.103 Sum_probs=128.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cc----hhhhcC-CceeeccCc-------cccCC--CCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HH----DELINM-GITPSLKWT-------EATQK--FPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~----~~l~~~-~i~~~~~D~-------~~~~~--~D~Vi 147 (268)
||+|||||+ ||||++|+++|+++ |++|++++|... .. ..+... +++.+.+|. +.+++ +|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF 78 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence 679999996 99999999999999 999999998532 11 122222 366676765 14555 99999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH--HHhcCCC-eEEEEccCeeecCCCCC----------------CCCCCCC
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGEG-SFLFTSSSAIYDCSDNG----------------ACDEDSP 197 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~--~~~~gvk-r~V~~SS~~vYg~~~~~----------------~~~E~~~ 197 (268)
|+|+....+ + .+.+..+++ +...+++ +|||+||.++|+..... +++|+.+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 158 (347)
T 1orr_A 79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ 158 (347)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCC
Confidence 999975421 1 123334444 2345675 99999999999864332 3677777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc------HH---HHHHHcCC-----c---cCCCCcc
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG------AH---VYWLQKGT-----V---DSRPDHI 254 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~------~~---~~~l~~g~-----~---~~~g~~~ 254 (268)
..|. +.|+.+|+++|++++++ + ++++||+.+||++.. .+ ...+..+. + .+.+++.
T Consensus 159 ~~~~--~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 236 (347)
T 1orr_A 159 LDFH--SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 236 (347)
T ss_dssp CCCC--HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred CCCC--CchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcce
Confidence 6665 79999999999998875 3 799999999999642 11 11222222 2 4678899
Q ss_pred cCcccHhhHhhcc
Q 024417 255 LNLIHYELPSRLQ 267 (268)
Q Consensus 255 ~~~Ihv~DlA~ai 267 (268)
++|+|++|+|+++
T Consensus 237 ~~~i~v~Dva~a~ 249 (347)
T 1orr_A 237 RDVLHAEDMISLY 249 (347)
T ss_dssp EECEEHHHHHHHH
T ss_pred EeeEEHHHHHHHH
Confidence 9999999999886
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=190.68 Aligned_cols=176 Identities=12% Similarity=0.123 Sum_probs=128.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcc--hhhhcCCceeeccCc-------cccC-----CCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT-------EATQ-----KFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~--~~l~~~~i~~~~~D~-------~~~~-----~~D~Vi 147 (268)
.|+|||||+ ||||++|+++|+++ | ++|++++|..... ..+. ++. +.+|. +.++ ++|+||
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vi 120 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIF 120 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHT--TCCCEEEEECCSSGGGGGGTT--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCcEEEEEecCCCcchhhccc--Cce-EeeecCcHHHHHHHHhhcccCCCCEEE
Confidence 468999997 99999999999999 9 9999999976542 2221 222 33332 1333 699999
Q ss_pred EccCCCCC--CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 024417 148 FCAPPSRS--LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (268)
Q Consensus 148 ~~a~~~~~--~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~ 216 (268)
|+|+.... .+ .+.++.+++ +.+.++ +|||+||.++|+.....+++|+++..|. +.|+.+|+++|++
T Consensus 121 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~ 197 (357)
T 2x6t_A 121 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVFGYSKFLFDEY 197 (357)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS--SHHHHHHHHHHHH
T ss_pred ECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCC--ChhHHHHHHHHHH
Confidence 99987542 22 123444554 234577 9999999999997666689999988776 8999999999999
Q ss_pred HHHc----C--ceEEEeCceecCCCc-------HH---HHHHHcCCc---cCCCCc-ccCcccHhhHhhcc
Q 024417 217 ILEF----G--GCVLRLAGLYKADRG-------AH---VYWLQKGTV---DSRPDH-ILNLIHYELPSRLQ 267 (268)
Q Consensus 217 l~~~----~--~tIlRp~~vyG~~~~-------~~---~~~l~~g~~---~~~g~~-~~~~Ihv~DlA~ai 267 (268)
++++ + ++++||+.+||++.. .+ ...+.++.. .+.+++ .++|+|++|+|+++
T Consensus 198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai 268 (357)
T 2x6t_A 198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN 268 (357)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHH
Confidence 9875 2 799999999999753 11 223445543 356677 89999999999986
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=7.8e-24 Score=195.05 Aligned_cols=181 Identities=12% Similarity=0.040 Sum_probs=127.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-----------------hhh------hcCCceeeccCc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----------------DEL------INMGITPSLKWT 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-----------------~~l------~~~~i~~~~~D~ 137 (268)
..|++|||||+ ||||++|+++|+++ |++|++++|..... +.+ ...+++.+.+|.
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl 86 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDI 86 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCT
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCC
Confidence 46889999996 99999999999999 99999999853221 011 123566777775
Q ss_pred ---c----ccCC--CCEEEEccCCCCC----CC----------hHHHHHHHH--HHhcCC-CeEEEEccCeeecCCCCCC
Q 024417 138 ---E----ATQK--FPYVIFCAPPSRS----LD----------YPGDVRLAA--LSWNGE-GSFLFTSSSAIYDCSDNGA 191 (268)
Q Consensus 138 ---~----~~~~--~D~Vi~~a~~~~~----~~----------~~~~~~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~ 191 (268)
+ ++++ +|+|||+|+.... .+ .+.++.+++ +.+.++ ++|||+||.++||... .+
T Consensus 87 ~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~ 165 (404)
T 1i24_A 87 CDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-ID 165 (404)
T ss_dssp TSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SC
T ss_pred CCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CC
Confidence 1 3455 9999999986431 11 122333443 234566 6999999999998653 46
Q ss_pred CCCC--------------CCCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc---------------
Q 024417 192 CDED--------------SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG--------------- 236 (268)
Q Consensus 192 ~~E~--------------~~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~--------------- 236 (268)
++|+ .+..|. +.|+.+|+++|++++.+ + ++++||+.+|||+..
T Consensus 166 ~~E~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~ 243 (404)
T 1i24_A 166 IEEGYITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD 243 (404)
T ss_dssp BCSSEEEEEETTEEEEEECCCCCC--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred CCccccccccccccccccCCCCCC--ChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence 7775 344554 79999999999988765 4 799999999999742
Q ss_pred -----H---HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 237 -----A---HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 237 -----~---~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
. +...+..|+. .+.+++.++|||++|+|+++
T Consensus 244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~ 285 (404)
T 1i24_A 244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 285 (404)
T ss_dssp TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHH
Confidence 1 1223445553 46778999999999999986
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=192.35 Aligned_cols=180 Identities=19% Similarity=0.083 Sum_probs=132.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhh-------hcCCceeeccCc---c----ccC--
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDEL-------INMGITPSLKWT---E----ATQ-- 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l-------~~~~i~~~~~D~---~----~~~-- 141 (268)
|++|||||+ |+||++|+++|+++ |++|++++|+++. .+.+ ...+++.+.+|. + .++
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 101 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc
Confidence 378999997 99999999999999 9999999997653 2222 123566666665 1 333
Q ss_pred CCCEEEEccCCCCCC----Ch-------HHHHHHHH--HHhcCC---CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 142 KFPYVIFCAPPSRSL----DY-------PGDVRLAA--LSWNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~~-------~~~~~~~~--~~~~gv---kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
++|+|||+|+..... ++ +.++.+++ +...++ ++|||+||.++|+.....+++|+++..|. +.
T Consensus 102 ~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~--~~ 179 (375)
T 1t2a_A 102 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR--SP 179 (375)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC--SH
T ss_pred CCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCC--Ch
Confidence 479999999975421 11 12333443 234566 89999999999997666789999988776 89
Q ss_pred HHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc--HH-------HHHHHcCC-c---cCCCCcccCcccHhhHhhc
Q 024417 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG--AH-------VYWLQKGT-V---DSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 206 y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~--~~-------~~~l~~g~-~---~~~g~~~~~~Ihv~DlA~a 266 (268)
|+.+|+++|++++.+ + ++++||+.+|||+.. .. ...+.+|. . ++.+++.++|||++|+|++
T Consensus 180 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a 259 (375)
T 1t2a_A 180 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 259 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHH
Confidence 999999999998765 3 689999999999643 11 11233453 2 4677899999999999998
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 260 ~ 260 (375)
T 1t2a_A 260 M 260 (375)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.90 E-value=7.5e-24 Score=179.25 Aligned_cols=177 Identities=12% Similarity=0.020 Sum_probs=111.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-----cccCCCCEEEEccCCCCCC--
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRSL-- 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-----~~~~~~D~Vi~~a~~~~~~-- 156 (268)
|||||||+ |+||++|+++|+++ |++|++++|++++...+. .+++.+.+|. +.+.++|+|||+|+.....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccc
Confidence 48999997 99999999999999 999999999987766554 5777777775 3678999999999975432
Q ss_pred ChHHHHHHHH--HHhcCCCeEEEEccCeeec-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--HH--HcC--ceEEEe
Q 024417 157 DYPGDVRLAA--LSWNGEGSFLFTSSSAIYD-CSDNGACDEDSPVVPIGRSPRTDVLLKAEKV--IL--EFG--GCVLRL 227 (268)
Q Consensus 157 ~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg-~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~--l~--~~~--~tIlRp 227 (268)
......++++ +++.+++++|++||.+.|. .....+..|+.+..|. +.|+.+|...|.+ +. +.+ ++++||
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~--~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp 155 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREA--PYYPTARAQAKQLEHLKSHQAEFSWTYISP 155 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------C--CCSCCHHHHHHHHHHHHTTTTTSCEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCH--HHHHHHHHHHHHHHHHHhhccCccEEEEeC
Confidence 2456666666 2455789999999987654 3333466777776665 6687888888875 55 344 899999
Q ss_pred CceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 228 AGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 228 ~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+||++.....+.+....+. ......++||++|+|+++
T Consensus 156 ~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~ 194 (221)
T 3ew7_A 156 SAMFEPGERTGDYQIGKDHLL-FGSDGNSFISMEDYAIAV 194 (221)
T ss_dssp SSCCCCC----------------------CCCHHHHHHHH
T ss_pred cceecCCCccCceEeccccce-ecCCCCceEeHHHHHHHH
Confidence 999998432222222222221 112234799999999986
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=187.98 Aligned_cols=170 Identities=19% Similarity=0.205 Sum_probs=119.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----ccC--CCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----ATQ--KFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~~--~~D~Vi~~a~~~ 153 (268)
+|+|||||+ |+||++|+++|+++ |++|++++|+.+.. + .+.+|. + .++ ++|+|||+|+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~------~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~ 71 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRARP------K--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAER 71 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC--------------------------CHHHHHHHCCSEEEECC---
T ss_pred CCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCCC------C--eEEecCCCHHHHHHHHHhhCCCEEEECCccc
Confidence 468999997 99999999999999 99999999875431 1 233332 1 333 499999999864
Q ss_pred CCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024417 154 RSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (268)
Q Consensus 154 ~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~ 220 (268)
... + .+.+..+++ +.+.++ +|||+||.++|+. ...+++|+++..|. +.|+.+|+++|++++.+
T Consensus 72 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~ 147 (315)
T 2ydy_A 72 RPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAPL--NLYGKTKLDGEKAVLEN 147 (315)
T ss_dssp ----------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCCC--SHHHHHHHHHHHHHHHH
T ss_pred ChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCCc--CHHHHHHHHHHHHHHHh
Confidence 321 1 123444444 233465 9999999999987 45689999987776 89999999999999987
Q ss_pred C--ceEEEeCceecCCCc-------HHHHHHH-cCCc-cCCCCcccCcccHhhHhhcc
Q 024417 221 G--GCVLRLAGLYKADRG-------AHVYWLQ-KGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 ~--~tIlRp~~vyG~~~~-------~~~~~l~-~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+.+||+... .+...+. .+.. ...+++.++++|++|+|+++
T Consensus 148 ~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 205 (315)
T 2ydy_A 148 NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVC 205 (315)
T ss_dssp CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHH
T ss_pred CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHH
Confidence 6 899999999998754 1233444 5553 23467889999999999886
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=191.65 Aligned_cols=179 Identities=14% Similarity=0.117 Sum_probs=130.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHH-hcCCCCeEEEEeCCCCc---------chhhhc-----------CC---ceeeccCc--
Q 024417 85 NDLLIVGP-GVLGRLVAEQWR-QEHPGCQIYGQTMTADH---------HDELIN-----------MG---ITPSLKWT-- 137 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~-~~~~G~~V~~~~R~~~~---------~~~l~~-----------~~---i~~~~~D~-- 137 (268)
|+|||||+ ||||++|+++|+ ++ |++|++++|.... .+.+.. .+ ++.+.+|.
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 58999997 999999999999 99 9999999997544 222211 13 66676765
Q ss_pred -c----ccC--C-CCEEEEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC-------C
Q 024417 138 -E----ATQ--K-FPYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-------N 189 (268)
Q Consensus 138 -~----~~~--~-~D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~-------~ 189 (268)
+ +++ + +|+|||+|+..... + .+.+..+++ +++.++++|||+||.++|+... .
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 1 333 5 99999999975421 1 123344444 2456889999999999998755 4
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCC-----------cHHHH--------HHHc
Q 024417 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADR-----------GAHVY--------WLQK 244 (268)
Q Consensus 190 ~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~-----------~~~~~--------~l~~ 244 (268)
.+++|+++..|. +.|+.+|+++|++++.+ + ++++||+.+||++. ..+.. .+..
T Consensus 161 ~~~~E~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 238 (397)
T 1gy8_A 161 EPIDINAKKSPE--SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAP 238 (397)
T ss_dssp CCBCTTSCCBCS--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSC
T ss_pred cCcCccCCCCCC--CchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHh
Confidence 689999988776 89999999999998775 3 79999999999952 11211 2223
Q ss_pred CC-------------c--cC------CCCcccCcccHhhHhhcc
Q 024417 245 GT-------------V--DS------RPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 245 g~-------------~--~~------~g~~~~~~Ihv~DlA~ai 267 (268)
+. + ++ .+++.++|||++|+|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~ 282 (397)
T 1gy8_A 239 DQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAH 282 (397)
T ss_dssp C-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHH
T ss_pred cCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHH
Confidence 32 1 22 567889999999999986
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.6e-23 Score=185.85 Aligned_cols=183 Identities=18% Similarity=0.127 Sum_probs=133.2
Q ss_pred CCCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh-hc-CCceeeccCc-------cccC--CCCE
Q 024417 78 SSGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-IN-MGITPSLKWT-------EATQ--KFPY 145 (268)
Q Consensus 78 ~~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l-~~-~~i~~~~~D~-------~~~~--~~D~ 145 (268)
.+..+..|+|||||+ |+||++|+++|+++ |++|++++|+......+ .. .+++.+.+|. ++++ ++|+
T Consensus 14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~ 91 (330)
T 2pzm_A 14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTH 91 (330)
T ss_dssp CCSTTTCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcccCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence 345556679999997 99999999999999 99999999975443211 11 3566666664 1455 8999
Q ss_pred EEEccCCCCC-CC--h-----HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCC--CCCCCCCCCCCCCCHHHHHHHHH
Q 024417 146 VIFCAPPSRS-LD--Y-----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNG--ACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 146 Vi~~a~~~~~-~~--~-----~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~--~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
|||+|+.... .. + +.+..+++ +.+.++++|||+||.++|+..... +++|++ .|. +.|+.+|+++
T Consensus 92 vih~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~~--~~Y~~sK~~~ 167 (330)
T 2pzm_A 92 VVHSAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--APF--TSYGISKTAG 167 (330)
T ss_dssp EEECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CCC--SHHHHHHHHH
T ss_pred EEECCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CCC--ChHHHHHHHH
Confidence 9999997543 11 1 12233343 234678999999999999865433 788887 454 7999999999
Q ss_pred HHHHHHcC--ceEEEeCceecCCC--cHH---HHHHHcCC-ccCCCCcccCcccHhhHhh-cc
Q 024417 214 EKVILEFG--GCVLRLAGLYKADR--GAH---VYWLQKGT-VDSRPDHILNLIHYELPSR-LQ 267 (268)
Q Consensus 214 E~~l~~~~--~tIlRp~~vyG~~~--~~~---~~~l~~g~-~~~~g~~~~~~Ihv~DlA~-ai 267 (268)
|++++.++ ++++||+++|||+. ... ...+..+. .++.+. .++++|++|+|+ ++
T Consensus 168 e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a~ 229 (330)
T 2pzm_A 168 EAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIAD 229 (330)
T ss_dssp HHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHHH
Confidence 99999875 79999999999985 222 12234443 234455 889999999999 75
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=186.91 Aligned_cols=181 Identities=17% Similarity=0.025 Sum_probs=128.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceee-ccCc-------cccCCCCE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPS-LKWT-------EATQKFPY 145 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~-~~D~-------~~~~~~D~ 145 (268)
..+|+|||||+ ||||++|+++|+++ |++|++++|+.++...+.. .+++.+ .+|. +.++++|+
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~ 86 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG 86 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence 34578999997 99999999999999 9999999997654433221 346666 5664 24668999
Q ss_pred EEEccCCCCCC-Ch-------HHHHHHHHH--H-hcCCCeEEEEccCeeecCCC----CCCCCCCCC-------------
Q 024417 146 VIFCAPPSRSL-DY-------PGDVRLAAL--S-WNGEGSFLFTSSSAIYDCSD----NGACDEDSP------------- 197 (268)
Q Consensus 146 Vi~~a~~~~~~-~~-------~~~~~~~~~--~-~~gvkr~V~~SS~~vYg~~~----~~~~~E~~~------------- 197 (268)
|||+|+..... ++ +.+..+++. . ..++++|||+||.++|+... +.+++|+++
T Consensus 87 vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 166 (342)
T 1y1p_A 87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPE 166 (342)
T ss_dssp EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCT
T ss_pred EEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccc
Confidence 99999975432 21 233444442 2 35789999999999986432 257888862
Q ss_pred ---CCCCCCCHHHHHHHHHHHHHHHc------C--ceEEEeCceecCCCcH---------HHHHHHcCCc---cCCCCcc
Q 024417 198 ---VVPIGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYKADRGA---------HVYWLQKGTV---DSRPDHI 254 (268)
Q Consensus 198 ---~~p~~~~~y~~sK~~aE~~l~~~------~--~tIlRp~~vyG~~~~~---------~~~~l~~g~~---~~~g~~~ 254 (268)
..|. +.|+.+|+.+|++++.+ + ++++||+.+||+.... +...+.+|+. .+.+ +.
T Consensus 167 ~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 243 (342)
T 1y1p_A 167 SDPQKSL--WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-PP 243 (342)
T ss_dssp TSTTHHH--HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-CS
T ss_pred cccccch--HHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-Cc
Confidence 2233 68999999999988765 3 5899999999996431 1223445553 2333 67
Q ss_pred cCcccHhhHhhcc
Q 024417 255 LNLIHYELPSRLQ 267 (268)
Q Consensus 255 ~~~Ihv~DlA~ai 267 (268)
++|+|++|+|+++
T Consensus 244 ~~~v~v~Dva~a~ 256 (342)
T 1y1p_A 244 QYYVSAVDIGLLH 256 (342)
T ss_dssp EEEEEHHHHHHHH
T ss_pred CCEeEHHHHHHHH
Confidence 8999999999876
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=178.14 Aligned_cols=177 Identities=8% Similarity=-0.038 Sum_probs=127.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-----cccCCCCEEEEccCCCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRSLD- 157 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-----~~~~~~D~Vi~~a~~~~~~~- 157 (268)
|||||||+ |+||++|+++|+++ |++|++++|++++...+...+++.+.+|. +.+.++|+|||+|+......
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 47999997 99999999999999 99999999988776666556788887775 25789999999999852211
Q ss_pred ---hHHHHHHHHH--HhcCCCeEEEEccCeeecCCCC---CCCCCCCCCCCCCCCHHHHHHHHHHHHH--H-HcC--ceE
Q 024417 158 ---YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN---GACDEDSPVVPIGRSPRTDVLLKAEKVI--L-EFG--GCV 224 (268)
Q Consensus 158 ---~~~~~~~~~~--~~~gvkr~V~~SS~~vYg~~~~---~~~~E~~~~~p~~~~~y~~sK~~aE~~l--~-~~~--~tI 224 (268)
.....++++. ++.+ +++|++||.+.|..... .+.+|...+.|. +.|+.+|..+|.+. . +.+ +++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~sK~~~e~~~~~~~~~~i~~~i 155 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ--PWYDGALYQYYEYQFLQMNANVNWIG 155 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS--TTHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc--hhhHHHHHHHHHHHHHHhcCCCcEEE
Confidence 4555666652 4557 99999999865543222 245555544444 78999999999542 2 223 899
Q ss_pred EEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhccC
Q 024417 225 LRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQC 268 (268)
Q Consensus 225 lRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai~ 268 (268)
+||+.+||++.... +.. .......++...+++|++|+|++++
T Consensus 156 vrp~~v~g~~~~~~-~~~-~~~~~~~~~~~~~~i~~~DvA~~~~ 197 (224)
T 3h2s_A 156 ISPSEAFPSGPATS-YVA-GKDTLLVGEDGQSHITTGNMALAIL 197 (224)
T ss_dssp EEECSBCCCCCCCC-EEE-ESSBCCCCTTSCCBCCHHHHHHHHH
T ss_pred EcCccccCCCcccC-cee-cccccccCCCCCceEeHHHHHHHHH
Confidence 99999999854321 111 1122334566789999999999863
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=187.96 Aligned_cols=180 Identities=19% Similarity=0.154 Sum_probs=129.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhh------cCCceeeccCc---c----ccC--C
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI------NMGITPSLKWT---E----ATQ--K 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~------~~~i~~~~~D~---~----~~~--~ 142 (268)
||+|||||+ |+||++|+++|+++ |++|++++|+.++ ...+. ..+++.+.+|. + .++ +
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 679999996 99999999999999 9999999997543 11111 13456666664 1 233 4
Q ss_pred CCEEEEccCCCCC----CCh-------HHHHHHHH--HHhcCC---CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 143 FPYVIFCAPPSRS----LDY-------PGDVRLAA--LSWNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 143 ~D~Vi~~a~~~~~----~~~-------~~~~~~~~--~~~~gv---kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
+|+|||+|+.... ++. +.+..+++ ....++ ++|||+||.++|+.....+++|+++..|. +.|
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~--~~Y 156 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPY 156 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC--SHH
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCC--ChH
Confidence 7999999986432 121 12334444 234566 89999999999997666689999988776 899
Q ss_pred HHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------H---HHHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------H---VYWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~---~~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|+++|++++.+ + ++++|+.++|||+... + ...+.+|.. ++.+++.++|+|++|+|+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~ 236 (372)
T 1db3_A 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHH
Confidence 99999999998764 3 6899999999996431 1 112345542 46778999999999999986
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=187.04 Aligned_cols=170 Identities=15% Similarity=0.120 Sum_probs=124.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----cccC--CCCEEEEccCCCCC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS- 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~~--~~D~Vi~~a~~~~~- 155 (268)
+|+|||||+ ||||++|+++|+++ |++|++++|+.. . ...|. +.++ ++|+|||+|+....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~~-~----------D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 69 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDE-L----------NLLDSRAVHDFFASERIDQVYLAAAKVGGI 69 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTT-C----------CTTCHHHHHHHHHHHCCSEEEECCCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCcc-C----------CccCHHHHHHHHHhcCCCEEEEcCeecCCc
Confidence 468999997 99999999999999 999999887531 0 11122 2455 89999999997642
Q ss_pred ----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHH
Q 024417 156 ----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVIL 218 (268)
Q Consensus 156 ----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~----~~~p~~~~~y~~sK~~aE~~l~ 218 (268)
.+ .+.+..+++ +.+.++++|||+||.++||.....+++|++ +..|. .+.|+.+|+.+|++++
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~E~~~~ 148 (321)
T 1e6u_A 70 VANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT-NEPYAIAKIAGIKLCE 148 (321)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGG-GHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCC-CCccHHHHHHHHHHHH
Confidence 11 123344444 245688999999999999976667888987 33342 1489999999999998
Q ss_pred Hc----C--ceEEEeCceecCCCc-------H---HHHHHH----cC-Cc---cCCCCcccCcccHhhHhhcc
Q 024417 219 EF----G--GCVLRLAGLYKADRG-------A---HVYWLQ----KG-TV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 219 ~~----~--~tIlRp~~vyG~~~~-------~---~~~~l~----~g-~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++ + ++++||+.+||++.. . +...+. .| .. ++.+++.++|||++|+|+++
T Consensus 149 ~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~ 221 (321)
T 1e6u_A 149 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS 221 (321)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred HHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHH
Confidence 74 3 799999999999753 1 122222 23 32 46788999999999999986
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=184.02 Aligned_cols=167 Identities=18% Similarity=0.143 Sum_probs=125.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----cccC--CCCEEEEccCCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRSL 156 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----~~~~--~~D~Vi~~a~~~~~~ 156 (268)
.++|||||+ ||||++|+++|+++ |++|++++|+.... .|. +.++ ++|+|||+|+....+
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~Dl------------~d~~~~~~~~~~~~~d~vih~A~~~~~~ 77 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDI------------TNVLAVNKFFNEKKPNVVINCAAHTAVD 77 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCT------------TCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCccCCC------------CCHHHHHHHHHhcCCCEEEECCccCCHH
Confidence 368999996 99999999999999 99999999963211 121 2344 799999999975421
Q ss_pred ----Ch-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024417 157 ----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (268)
Q Consensus 157 ----~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~-- 221 (268)
++ +.+..+++ +.+.++ +|||+||.++|+.....+++|+++..|. +.|+.+|+++|++++++.
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~~~~~~~~~ 154 (292)
T 1vl0_A 78 KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ--SAYGKTKLEGENFVKALNPK 154 (292)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSS
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCc--cHHHHHHHHHHHHHHhhCCC
Confidence 11 22334444 234567 9999999999997666689999988776 899999999999999876
Q ss_pred ceEEEeCceecCCCcHHH---HHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 222 GCVLRLAGLYKADRGAHV---YWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 ~tIlRp~~vyG~~~~~~~---~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+||++.+... ..+..+.. ...+++.++|+|++|+|+++
T Consensus 155 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 204 (292)
T 1vl0_A 155 YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV 204 (292)
T ss_dssp EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred eEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHH
Confidence 899999999999443322 22344543 22356889999999999986
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.8e-23 Score=185.42 Aligned_cols=181 Identities=15% Similarity=0.073 Sum_probs=129.8
Q ss_pred CCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhhc-CCceeeccCc-------cccCC--CCEEE
Q 024417 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-MGITPSLKWT-------EATQK--FPYVI 147 (268)
Q Consensus 80 ~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~~-~~i~~~~~D~-------~~~~~--~D~Vi 147 (268)
....||+|||||+ |+||++|+++|+++ |++|++++|+.... +.+.. .+++.+.+|. +++++ +|+||
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi 94 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVV 94 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence 3456789999996 99999999999999 99999999975432 22222 3566666664 13455 99999
Q ss_pred EccCCCCCC---C-----hHHHHHHHH--HHhcCCCeEEEEccCeeec----CCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 148 FCAPPSRSL---D-----YPGDVRLAA--LSWNGEGSFLFTSSSAIYD----CSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 148 ~~a~~~~~~---~-----~~~~~~~~~--~~~~gvkr~V~~SS~~vYg----~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
|+|+..... + .+.+..+++ +...++++|||+||.++|+ .... +++|++ .|. .+.|+.+|+++
T Consensus 95 h~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~-~~~Y~~sK~~~ 170 (333)
T 2q1w_A 95 HTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPA-NSSYAISKSAN 170 (333)
T ss_dssp ECCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCT-TCHHHHHHHHH
T ss_pred ECceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCC-CCchHHHHHHH
Confidence 999975431 1 122333443 2346889999999999998 5444 788886 332 16899999999
Q ss_pred HHHHHH-cC-ceEEEeCceecCCCc--HH---HHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILE-FG-GCVLRLAGLYKADRG--AH---VYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~-~~-~tIlRp~~vyG~~~~--~~---~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++. +. ++++||+.+|||+.. .. ...+..+.. .+ ++..++++|++|+|+++
T Consensus 171 E~~~~~s~~~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai 231 (333)
T 2q1w_A 171 EDYLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARAT 231 (333)
T ss_dssp HHHHHHHTCCEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHH
T ss_pred HHHHHhhhCCeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHH
Confidence 999998 74 899999999999842 21 223334432 34 67889999999999886
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.3e-23 Score=197.64 Aligned_cols=174 Identities=11% Similarity=0.036 Sum_probs=127.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC--ccccCCCCEEEEccCCCCCC----
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW--TEATQKFPYVIFCAPPSRSL---- 156 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D--~~~~~~~D~Vi~~a~~~~~~---- 156 (268)
||+|||||+ ||||++|+++|+++ |++|++++|++.+... +.....| .+.+.++|+|||||+.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~~~~-----v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~~~~ 219 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPKPGK-----RFWDPLNPASDLLDGADVLVHLAGEPIFGRFND 219 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCCTTC-----EECCTTSCCTTTTTTCSEEEECCCC-----CCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCCccc-----eeecccchhHHhcCCCCEEEECCCCccccccch
Confidence 689999996 99999999999999 9999999998765422 1111112 24678999999999975321
Q ss_pred C--------hHHHHHHHH---HHhcCCCeEEEEccCeeec-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---cC
Q 024417 157 D--------YPGDVRLAA---LSWNGEGSFLFTSSSAIYD-CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE---FG 221 (268)
Q Consensus 157 ~--------~~~~~~~~~---~~~~gvkr~V~~SS~~vYg-~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~---~~ 221 (268)
+ ++.++.+++ .+..++++|||+||.++|| .....+++|+++. +. +.|++.|.++|+++.. .+
T Consensus 220 ~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~--~~y~~~~~~~E~~~~~~~~~g 296 (516)
T 3oh8_A 220 SHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GD--DFLAEVCRDWEHATAPASDAG 296 (516)
T ss_dssp GGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CS--SHHHHHHHHHHHTTHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-Cc--ChHHHHHHHHHHHHHHHHhCC
Confidence 1 233445554 2346889999999999999 4444588999886 44 7899999998876543 34
Q ss_pred --ceEEEeCceecCCCcHHHHH---HHcCC--ccCCCCcccCcccHhhHhhcc
Q 024417 222 --GCVLRLAGLYKADRGAHVYW---LQKGT--VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 --~tIlRp~~vyG~~~~~~~~~---l~~g~--~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++|+||+.+||++.+..... +..|. .++.+++.++|||++|+|+++
T Consensus 297 i~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai 349 (516)
T 3oh8_A 297 KRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIY 349 (516)
T ss_dssp CEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHH
T ss_pred CCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHH
Confidence 79999999999986543322 22232 357788999999999999986
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-23 Score=185.61 Aligned_cols=180 Identities=14% Similarity=0.098 Sum_probs=130.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC--Ccchhhh----cCCceeeccCc-------cccC--CCCEEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELI----NMGITPSLKWT-------EATQ--KFPYVIF 148 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~--~~~~~l~----~~~i~~~~~D~-------~~~~--~~D~Vi~ 148 (268)
|||||||+ ||||++|+++|+++ +|++|++++|.. ...+.+. ..+++.+.+|. +.++ ++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKN-TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH-CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhc-CCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 47999997 99999999999986 269999999965 2222222 12566676765 1344 8999999
Q ss_pred ccCCCCCC----C-------hHHHHHHHH--HHhc--CCC-------eEEEEccCeeecCCCC--C--------CCCCCC
Q 024417 149 CAPPSRSL----D-------YPGDVRLAA--LSWN--GEG-------SFLFTSSSAIYDCSDN--G--------ACDEDS 196 (268)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~~~--~~~~--gvk-------r~V~~SS~~vYg~~~~--~--------~~~E~~ 196 (268)
+|+....+ + .+.+..+++ +... +++ +|||+||.++||.... . +++|++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 99975421 1 122334444 1233 677 9999999999986431 1 789998
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccHh
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHYE 261 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv~ 261 (268)
+..|. +.|+.+|+++|++++.+ + ++++||+.+||++... +...+.++.. ++.+++.++|+|++
T Consensus 160 ~~~~~--~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 237 (361)
T 1kew_A 160 AYAPS--SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp CCCCC--SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCCC--CccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence 87776 89999999999998775 3 7999999999997531 1223344543 46778899999999
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+|+++
T Consensus 238 Dva~a~ 243 (361)
T 1kew_A 238 DHARAL 243 (361)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=182.25 Aligned_cols=180 Identities=16% Similarity=0.069 Sum_probs=132.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--hhhc----CCceeeccCc---c----ccC--CCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELIN----MGITPSLKWT---E----ATQ--KFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--~l~~----~~i~~~~~D~---~----~~~--~~D~Vi 147 (268)
+|+|||||+ |+||++|+++|+++ |++|++++|++++.. .+.. .+++.+.+|. + .++ ++|+||
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 80 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY 80 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 468999997 99999999999999 999999999876532 2222 2466666664 1 333 479999
Q ss_pred EccCCCCC----CCh-------HHHHHHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 148 FCAPPSRS----LDY-------PGDVRLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 148 ~~a~~~~~----~~~-------~~~~~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
|+|+.... +++ +.+..+++ ..+.++ ++|||+||.++||...+.+++|+.+..|. +.|+.+|+++
T Consensus 81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~--~~Y~~sK~~~ 158 (345)
T 2z1m_A 81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR--SPYAVAKLFG 158 (345)
T ss_dssp ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHH
T ss_pred ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC--ChhHHHHHHH
Confidence 99997532 121 12333443 234466 89999999999998766789999887776 8999999999
Q ss_pred HHHHHHc----C--ceEEEeCceecCCCc--HHH-------HHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF----G--GCVLRLAGLYKADRG--AHV-------YWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~----~--~tIlRp~~vyG~~~~--~~~-------~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++.+ + ++++|+.++|||+.. ... ..+..|.. .+.+++.++|+|++|+|+++
T Consensus 159 e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~ 231 (345)
T 2z1m_A 159 HWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAM 231 (345)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHH
Confidence 9998765 2 588999999999743 111 12234432 45677889999999999886
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.9e-22 Score=173.28 Aligned_cols=167 Identities=16% Similarity=0.137 Sum_probs=125.9
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCc-eeeccCc-----cccCCCCEEEEccCCC
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-TPSLKWT-----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i-~~~~~D~-----~~~~~~D~Vi~~a~~~ 153 (268)
.+..|+|||||+ |+||++|+++|+++ |++|++++|++++.+.+...++ +.+.+|. +.+.++|+|||+|+..
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~ 95 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSG 95 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCC
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCC
Confidence 455679999997 99999999999999 9999999999888777766788 8887775 3678999999999976
Q ss_pred CCCCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--c
Q 024417 154 RSLDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (268)
Q Consensus 154 ~~~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~ 222 (268)
...++ +.+..+++ +++.++++|||+||.+.+.. |..+ .+. +.|+.+|.++|+++++.+ +
T Consensus 96 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~~--~~Y~~sK~~~e~~~~~~gi~~ 165 (236)
T 3e8x_A 96 PHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MNM--RHYLVAKRLADDELKRSSLDY 165 (236)
T ss_dssp TTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GGG--HHHHHHHHHHHHHHHHSSSEE
T ss_pred CCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hhh--hhHHHHHHHHHHHHHHCCCCE
Confidence 54332 22334444 24568999999999544321 1122 233 689999999999999887 8
Q ss_pred eEEEeCceecCCCcHHHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++||+.+||+... +.. ...++...+++|++|+|+++
T Consensus 166 ~~lrpg~v~~~~~~--------~~~~~~~~~~~~~~~i~~~Dva~~~ 204 (236)
T 3e8x_A 166 TIVRPGPLSNEEST--------GKVTVSPHFSEITRSITRHDVAKVI 204 (236)
T ss_dssp EEEEECSEECSCCC--------SEEEEESSCSCCCCCEEHHHHHHHH
T ss_pred EEEeCCcccCCCCC--------CeEEeccCCCcccCcEeHHHHHHHH
Confidence 99999999998542 111 23445578999999999986
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=183.76 Aligned_cols=182 Identities=12% Similarity=0.100 Sum_probs=130.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCC-------CeEEEEeCCCCcchhhhcCCceeeccCc---c----cc-CCCCE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-------CQIYGQTMTADHHDELINMGITPSLKWT---E----AT-QKFPY 145 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G-------~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~-~~~D~ 145 (268)
+.+|+|||||+ ||||++|+++|+++ | ++|++++|+.++.......+++.+.+|. + .+ .++|+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~ 89 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV 89 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHH--CEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhc--CCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence 34578999996 99999999999999 9 8999999986543221223455566664 1 34 58999
Q ss_pred EEEccCCCCC---CCh-------HHHHHHHH--HHhcC-----CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 146 VIFCAPPSRS---LDY-------PGDVRLAA--LSWNG-----EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 146 Vi~~a~~~~~---~~~-------~~~~~~~~--~~~~g-----vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
|||+|+.... .++ +.++.+++ +.+.+ +++|||+||.++|+.....+++|++++.|. +.|+.
T Consensus 90 vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~--~~Y~~ 167 (342)
T 2hrz_A 90 IFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL--TSYGT 167 (342)
T ss_dssp EEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS--SHHHH
T ss_pred EEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc--chHHH
Confidence 9999997531 111 22333443 12233 899999999999997555689999998776 89999
Q ss_pred HHHHHHHHHHHcC------ceEEEeCceec-CCCc-----HH----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEFG------GCVLRLAGLYK-ADRG-----AH----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~~------~tIlRp~~vyG-~~~~-----~~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|+.+|++++++. .+++|++.+|| |+.. .+ ...+.+|.. ...++...+++|++|+|+++
T Consensus 168 sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~ 245 (342)
T 2hrz_A 168 QKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFL 245 (342)
T ss_dssp HHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHH
Confidence 9999999987752 68999999998 6541 11 122344553 23456777899999999875
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.89 E-value=9.7e-23 Score=193.50 Aligned_cols=187 Identities=10% Similarity=0.054 Sum_probs=134.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCC-CCeEEEEeCCCCcchhh---------------------hcCCceeeccCc
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHP-GCQIYGQTMTADHHDEL---------------------INMGITPSLKWT 137 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~-G~~V~~~~R~~~~~~~l---------------------~~~~i~~~~~D~ 137 (268)
...||+|||||+ |+||++|+++|+++.+ |++|++++|+.+....+ ...+++++.+|.
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 345789999997 9999999999998743 69999999986543211 113566666664
Q ss_pred c-------------ccCCCCEEEEccCCCCCCC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 138 E-------------ATQKFPYVIFCAPPSRSLD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 138 ~-------------~~~~~D~Vi~~a~~~~~~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
. .++++|+|||+|+...... .+.++.+++ +.+.++++|||+||.++|+.....+++|+
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~ 229 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED 229 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence 1 3468999999999754322 344556665 24567899999999999997666788998
Q ss_pred CCCCCCCC---------CHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCC-----c---HHHHH----HHcCCc-
Q 024417 196 SPVVPIGR---------SPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADR-----G---AHVYW----LQKGTV- 247 (268)
Q Consensus 196 ~~~~p~~~---------~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~-----~---~~~~~----l~~g~~- 247 (268)
.+..|... +.|+.+|+.+|++++++ + ++++||++|||++. + ++... +..|..
T Consensus 230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P 309 (478)
T 4dqv_A 230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP 309 (478)
T ss_dssp SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEE
T ss_pred ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCccc
Confidence 87654311 34999999999999876 3 79999999999843 1 22211 233432
Q ss_pred ---cC---C---CCcccCcccHhhHhhcc
Q 024417 248 ---DS---R---PDHILNLIHYELPSRLQ 267 (268)
Q Consensus 248 ---~~---~---g~~~~~~Ihv~DlA~ai 267 (268)
.. . ++..++|+|++|+|+++
T Consensus 310 ~~~~~~~~~G~~~~~~~~~v~vdDvA~ai 338 (478)
T 4dqv_A 310 RSFYEPDSEGNRQRAHFDGLPVTFVAEAI 338 (478)
T ss_dssp SCSBCCCTTSCCCCCCCCEEEHHHHHHHH
T ss_pred ccccccccccccccceeeeeeHHHHHHHH
Confidence 11 1 26789999999999986
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-23 Score=175.24 Aligned_cols=164 Identities=10% Similarity=0.006 Sum_probs=123.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------cccCCCCEEEEccCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------~~~~~~D~Vi~~a~~~~~ 155 (268)
|||||||+ |+||++++++|+++ |++|++++|++++...+ .+++.+.+|. +.++++|+|||+|+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK 76 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 48999996 99999999999999 99999999987665443 4666666653 257899999999997543
Q ss_pred CC---hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHcC--ceEEEe
Q 024417 156 LD---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI-LEFG--GCVLRL 227 (268)
Q Consensus 156 ~~---~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l-~~~~--~tIlRp 227 (268)
+. ...+..+++ +++.++++|||+||.++|+.. +.+| .+..|. +.|+.+|.++|+++ .+.+ ++++||
T Consensus 77 ~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~~--~~Y~~sK~~~e~~~~~~~~i~~~ilrp 150 (219)
T 3dqp_A 77 SLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDAL--KDYYIAKHFADLYLTKETNLDYTIIQP 150 (219)
T ss_dssp SCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHHT--HHHHHHHHHHHHHHHHSCCCEEEEEEE
T ss_pred CcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-cccccc--cHHHHHHHHHHHHHHhccCCcEEEEeC
Confidence 21 344455554 256789999999998777532 3445 344444 78999999999999 5555 899999
Q ss_pred CceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 228 AGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 228 ~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+||+... +.. ..++..+++++++|+|+++
T Consensus 151 ~~v~g~~~~--------~~~-~~~~~~~~~i~~~Dva~~i 181 (219)
T 3dqp_A 151 GALTEEEAT--------GLI-DINDEVSASNTIGDVADTI 181 (219)
T ss_dssp CSEECSCCC--------SEE-EESSSCCCCEEHHHHHHHH
T ss_pred ceEecCCCC--------Ccc-ccCCCcCCcccHHHHHHHH
Confidence 999998542 111 1247788999999999986
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.7e-23 Score=188.37 Aligned_cols=178 Identities=15% Similarity=0.048 Sum_probs=129.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhhc------C-CceeeccCc---c----ccC--C
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELIN------M-GITPSLKWT---E----ATQ--K 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~~------~-~i~~~~~D~---~----~~~--~ 142 (268)
++|||||+ ||||++|+++|+++ |++|++++|+.++ .+.+.. . +++++.+|. + +++ +
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred CeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence 78999997 99999999999999 9999999998654 222211 1 566666664 1 333 4
Q ss_pred CCEEEEccCCCCCC----Ch-------HHHHHHHH--HHhcCCC-----eEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL----DY-------PGDVRLAA--LSWNGEG-----SFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~----~~-------~~~~~~~~--~~~~gvk-----r~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
+|+|||+|+..... ++ +.+..+++ +...+++ +|||+||.++||.... +++|+++..|. +
T Consensus 107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~~--~ 183 (381)
T 1n7h_A 107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHPR--S 183 (381)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCCC--S
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCCC--C
Confidence 79999999975421 11 12333443 1223444 9999999999997655 89999988776 8
Q ss_pred HHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------HH---HHHHcCC-c---cCCCCcccCcccHhhHhh
Q 024417 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HV---YWLQKGT-V---DSRPDHILNLIHYELPSR 265 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~---~~l~~g~-~---~~~g~~~~~~Ihv~DlA~ 265 (268)
.|+.+|+.+|++++.+ + ++++|+.++|||+... +. ..+.+|. . ++.+++.++|+|++|+|+
T Consensus 184 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~ 263 (381)
T 1n7h_A 184 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 263 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHH
Confidence 9999999999998765 3 5789999999997431 11 1233443 1 466789999999999999
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 264 a~ 265 (381)
T 1n7h_A 264 AM 265 (381)
T ss_dssp HH
T ss_pred HH
Confidence 86
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1e-22 Score=181.69 Aligned_cols=175 Identities=12% Similarity=0.081 Sum_probs=127.4
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccC--CCCEEEEccCCCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQ--KFPYVIFCAPPSRS 155 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~--~~D~Vi~~a~~~~~ 155 (268)
+|||||+ ||||++|+++|+++.+|++|++++|+..... +++.+.+|. +.++ ++|+|||+|+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 5899996 9999999999987533689999998765432 445555664 1344 89999999987431
Q ss_pred ---CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc--
Q 024417 156 ---LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-- 220 (268)
Q Consensus 156 ---~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-- 220 (268)
.+ .+.+..+++ +++.++++|||+||.++|+.. ...+.+|+++..|. +.|+.+|+++|++++.+
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~ 153 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR--TMFGVTKIAAELLGQYYYE 153 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC--SHHHHHHHHHHHHHHHHHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCC--chHHHHHHHHHHHHHHHHH
Confidence 11 123344444 245689999999999999864 23578888887776 89999999999988754
Q ss_pred --C--ceEEEeCceecCCC-------cHHH----HHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 221 --G--GCVLRLAGLYKADR-------GAHV----YWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 221 --~--~tIlRp~~vyG~~~-------~~~~----~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+ ++++||+++||+.. .... ..+..+.. +..+++.++|+|++|+|+++
T Consensus 154 ~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 217 (317)
T 3ajr_A 154 KFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKAL 217 (317)
T ss_dssp HHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHH
T ss_pred hcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHH
Confidence 3 79999999999642 1111 12334443 45678899999999999876
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-22 Score=177.70 Aligned_cols=166 Identities=16% Similarity=0.103 Sum_probs=128.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+|||||+ |+||++|+++|+++.+|++|++++|++++...+...+++.+.+|. ++++++|+|||+|+... +
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~-~ 79 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY-D 79 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS-C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc-C
Confidence 47999997 999999999999865589999999988776666556777777775 25789999999998642 2
Q ss_pred C--hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCce
Q 024417 157 D--YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (268)
Q Consensus 157 ~--~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~v 230 (268)
+ ...+..+++ +++.++++|||+||.++|+ .| .+|+.+|.++|+++++.+ ++++||+.+
T Consensus 80 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~---~~y~~~K~~~E~~~~~~~~~~~ilrp~~~ 143 (287)
T 2jl1_A 80 NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE-------------SI---IPLAHVHLATEYAIRTTNIPYTFLRNALY 143 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG-------------CC---STHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------CC---CchHHHHHHHHHHHHHcCCCeEEEECCEe
Confidence 2 344555555 3457899999999988763 12 369999999999998876 899999999
Q ss_pred ecCC-CcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 231 YKAD-RGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 231 yG~~-~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|+. ...+...+..+.. ...++..++|+|++|+|+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 182 (287)
T 2jl1_A 144 TDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAA 182 (287)
T ss_dssp HHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHH
T ss_pred ccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHH
Confidence 8865 3333334445554 45678889999999999876
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-22 Score=178.87 Aligned_cols=180 Identities=15% Similarity=0.064 Sum_probs=125.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc----chhhh---cCCceeeccCc---c----ccC--CCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDELI---NMGITPSLKWT---E----ATQ--KFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~----~~~l~---~~~i~~~~~D~---~----~~~--~~D~Vi 147 (268)
|+|||||+ |+||++|+++|+++ |++|++++|.... .+.+. ...++.+.+|. + .++ ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 48999997 99999999999999 9999999875322 11121 12455666664 1 232 599999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE 214 (268)
|+|+..... + .+.+..+++ +++.++++|||+||.++||.....+++|+.+..|. .+.|+.+|+++|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-~~~Y~~sK~~~e 157 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTP-QSPYGKSKLMVE 157 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC-SSHHHHHHHHHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCC-CChHHHHHHHHH
Confidence 999865321 1 122333443 23467899999999999997666688999876551 279999999999
Q ss_pred HHHHHc-----C--ceEEEeCceecCCC------------cHHHH---HH-H-cCCc---c------CCCCcccCcccHh
Q 024417 215 KVILEF-----G--GCVLRLAGLYKADR------------GAHVY---WL-Q-KGTV---D------SRPDHILNLIHYE 261 (268)
Q Consensus 215 ~~l~~~-----~--~tIlRp~~vyG~~~------------~~~~~---~l-~-~g~~---~------~~g~~~~~~Ihv~ 261 (268)
++++.+ + ++++||+++||+.. ..+.. .+ . .+.. . +.|++.++|||++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 988763 3 69999999999831 11111 11 2 2221 1 2467889999999
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+|+++
T Consensus 238 Dva~a~ 243 (338)
T 1udb_A 238 DLADGH 243 (338)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-23 Score=178.34 Aligned_cols=163 Identities=12% Similarity=0.033 Sum_probs=123.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~ 155 (268)
|++|||||+ |+||++|+++|+++ |++|++++|++++.. ..+++.+.+|. +.++++|+|||+|+....
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~ 76 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVE 76 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 578999997 99999999999999 999999999865421 13556666664 257899999999987643
Q ss_pred CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C
Q 024417 156 LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G 221 (268)
Q Consensus 156 ~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~----~ 221 (268)
.++ ..+..+++ ..+.++++|||+||..+|+.. ...+++|++++.|. +.|+.+|+..|++++.+ +
T Consensus 77 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~g 154 (267)
T 3ay3_A 77 RPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD--SLYGLSKCFGEDLASLYYHKFD 154 (267)
T ss_dssp CCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHcC
Confidence 332 22334444 245688999999999999864 34689999988776 89999999999998753 3
Q ss_pred --ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 222 --GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 --~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+|+... .++...+|+|++|+|+++
T Consensus 155 i~~~~lrp~~v~~~~~--------------~~~~~~~~~~~~dva~~~ 188 (267)
T 3ay3_A 155 IETLNIRIGSCFPKPK--------------DARMMATWLSVDDFMRLM 188 (267)
T ss_dssp CCEEEEEECBCSSSCC--------------SHHHHHHBCCHHHHHHHH
T ss_pred CCEEEEeceeecCCCC--------------CCCeeeccccHHHHHHHH
Confidence 79999999995321 123356788888888775
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-22 Score=174.90 Aligned_cols=144 Identities=13% Similarity=0.078 Sum_probs=113.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~ 154 (268)
.|++|||||+ |+||++|+++|+++ |++|++++|++.+.. ..+++.+.+|. +.++++|+|||+|+...
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~ 76 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISV 76 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcC
Confidence 3678999996 99999999999999 999999999876543 34566677765 25789999999999855
Q ss_pred CCChHH-------HHHHHH--HHhcCCCeEEEEccCeeecCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----
Q 024417 155 SLDYPG-------DVRLAA--LSWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---- 220 (268)
Q Consensus 155 ~~~~~~-------~~~~~~--~~~~gvkr~V~~SS~~vYg~~-~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~---- 220 (268)
.+++.+ +..+++ .++.++++|||+||..+|+.. ...+++|+.+..|. +.|+.+|+..|.+++.+
T Consensus 77 ~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~a~~~ 154 (267)
T 3rft_A 77 EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD--GLYGVSKCFGENLARMYFDKF 154 (267)
T ss_dssp CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHh
Confidence 444322 223333 245688999999999999753 34689999988776 89999999999988643
Q ss_pred C--ceEEEeCceecC
Q 024417 221 G--GCVLRLAGLYKA 233 (268)
Q Consensus 221 ~--~tIlRp~~vyG~ 233 (268)
+ ++++||+.+||+
T Consensus 155 g~~~~~vr~~~v~~~ 169 (267)
T 3rft_A 155 GQETALVRIGSCTPE 169 (267)
T ss_dssp CCCEEEEEECBCSSS
T ss_pred CCeEEEEEeecccCC
Confidence 3 689999999986
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.1e-22 Score=184.72 Aligned_cols=183 Identities=16% Similarity=0.178 Sum_probs=129.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---hh---------------hcCCceeeccCcc----
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---EL---------------INMGITPSLKWTE---- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~l---------------~~~~i~~~~~D~~---- 138 (268)
..|++|||||+ |+||++|+++|+++ |++|++++|+++... .+ ...+++++.+|..
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 34679999997 99999999999988 999999999876211 11 1246777777752
Q ss_pred --ccCCCCEEEEccCCCCCC-C-------hHHHHHHHH-HHhcCCCeEEEEccCeeecC-----CCCCCCCCCCCCCC-C
Q 024417 139 --ATQKFPYVIFCAPPSRSL-D-------YPGDVRLAA-LSWNGEGSFLFTSSSAIYDC-----SDNGACDEDSPVVP-I 201 (268)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~~~-~~~~gvkr~V~~SS~~vYg~-----~~~~~~~E~~~~~p-~ 201 (268)
...++|+|||+|+..... + .+.++.+++ +...++++|||+||.++ |. ....+++|+++..+ .
T Consensus 145 l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~ 223 (427)
T 4f6c_A 145 VVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL 223 (427)
T ss_dssp CCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred CCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence 356999999999975421 1 234445554 12227899999999998 43 23457889887332 1
Q ss_pred CCCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCCCcH----------HHH---HHHcCCc--cCCCCcccCcccHh
Q 024417 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGA----------HVY---WLQKGTV--DSRPDHILNLIHYE 261 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~~~~----------~~~---~l~~g~~--~~~g~~~~~~Ihv~ 261 (268)
..+.|+.+|+.+|++++++ + ++++||+.|||+.... +.. .+..+.. .+.++..++|+|++
T Consensus 224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 303 (427)
T 4f6c_A 224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD 303 (427)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHH
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHH
Confidence 2379999999999999874 3 7999999999996431 111 2223333 23368999999999
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+|+++
T Consensus 304 DvA~ai 309 (427)
T 4f6c_A 304 TTARQI 309 (427)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-22 Score=188.05 Aligned_cols=185 Identities=16% Similarity=0.174 Sum_probs=131.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh------------------hhcCCceeeccCcc----
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE------------------LINMGITPSLKWTE---- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~------------------l~~~~i~~~~~D~~---- 138 (268)
..||+|||||+ ||||++|+++|+++ |++|++++|+..+... ....+++++.+|..
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 225 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 225 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSS
T ss_pred CCCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccccc
Confidence 34689999997 99999999999888 9999999998763211 11246777777752
Q ss_pred --ccCCCCEEEEccCCCCCC----C----hHHHHHHHH-HHhcCCCeEEEEccCee--ecC--CCCCCCCCCCCCCC-CC
Q 024417 139 --ATQKFPYVIFCAPPSRSL----D----YPGDVRLAA-LSWNGEGSFLFTSSSAI--YDC--SDNGACDEDSPVVP-IG 202 (268)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~----~----~~~~~~~~~-~~~~gvkr~V~~SS~~v--Yg~--~~~~~~~E~~~~~p-~~ 202 (268)
...++|+|||+|+..... . .+.++++++ ....++++|||+||.++ |.. ....+++|+++..+ ..
T Consensus 226 l~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~ 305 (508)
T 4f6l_B 226 VVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL 305 (508)
T ss_dssp CCCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCC
T ss_pred CCCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccccccccccC
Confidence 357999999999975321 1 345556665 22337899999999999 322 23457888887332 12
Q ss_pred CCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCCCcH----------HHHH---HHcCCc--cCCCCcccCcccHhh
Q 024417 203 RSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGA----------HVYW---LQKGTV--DSRPDHILNLIHYEL 262 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~~~~----------~~~~---l~~g~~--~~~g~~~~~~Ihv~D 262 (268)
.+.|+++|+.+|++++++ + ++|+||+.+||+.... +... +..+.. .+.++..++|+|++|
T Consensus 306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~D 385 (508)
T 4f6l_B 306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDT 385 (508)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHH
Confidence 379999999999999874 3 7999999999996431 1112 222332 234689999999999
Q ss_pred HhhccC
Q 024417 263 PSRLQC 268 (268)
Q Consensus 263 lA~ai~ 268 (268)
+|++++
T Consensus 386 vA~ai~ 391 (508)
T 4f6l_B 386 TARQIV 391 (508)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999863
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=5.5e-22 Score=195.13 Aligned_cols=184 Identities=15% Similarity=0.115 Sum_probs=133.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc---c-----ccCCCCEEEEccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~---~-----~~~~~D~Vi~~a~ 151 (268)
.+||+|||||+ ||||++|+++|+++ +|++|++++|++++...+. ..+++.+.+|. + .++++|+|||+|+
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~-~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa 391 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA 391 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHS-SSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhc-CCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECce
Confidence 35678999997 99999999999986 2699999999876654432 24566776664 1 3458999999998
Q ss_pred CCCCC----Ch-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC---CC--CCCCHHHHHHHHH
Q 024417 152 PSRSL----DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VP--IGRSPRTDVLLKA 213 (268)
Q Consensus 152 ~~~~~----~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~---~p--~~~~~y~~sK~~a 213 (268)
..... ++ +.+..+++ +.+.+ ++|||+||.++||.....+++|+++. .| ...+.|+.+|+.+
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~ 470 (660)
T 1z7e_A 392 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLL 470 (660)
T ss_dssp CCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHH
T ss_pred ecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHH
Confidence 75421 11 22334444 23456 99999999999997666678898753 11 1125899999999
Q ss_pred HHHHHHc----C--ceEEEeCceecCCCcH--------------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF----G--GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~----~--~tIlRp~~vyG~~~~~--------------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|++++++ + ++++||+.+||++... +...+.+|.. .+.+++.++|+|++|+|+++
T Consensus 471 E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~ai 547 (660)
T 1z7e_A 471 DRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 547 (660)
T ss_dssp HHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHHH
Confidence 9998654 3 7999999999997521 1223444553 35678899999999999876
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=175.76 Aligned_cols=182 Identities=13% Similarity=0.007 Sum_probs=119.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---hhhc-----CCceeeccCc-------cccCCCCEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELIN-----MGITPSLKWT-------EATQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~l~~-----~~i~~~~~D~-------~~~~~~D~V 146 (268)
.+++|||||+ ||||++|+++|+++ |++|++++|+++... .+.. .+++.+.+|. ++++++|+|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 81 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV 81 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence 3678999996 99999999999999 999999999876422 1111 1355565654 256799999
Q ss_pred EEccCCCCC--CC--------hHHHHHHHH--HHhcC-CCeEEEEccCe-eecCC-CCCCCCCCCCCCC-------CCCC
Q 024417 147 IFCAPPSRS--LD--------YPGDVRLAA--LSWNG-EGSFLFTSSSA-IYDCS-DNGACDEDSPVVP-------IGRS 204 (268)
Q Consensus 147 i~~a~~~~~--~~--------~~~~~~~~~--~~~~g-vkr~V~~SS~~-vYg~~-~~~~~~E~~~~~p-------~~~~ 204 (268)
||+|++... .+ .+.++.+++ +.+.+ +++|||+||.+ +|+.. ...+++|+.+..+ ....
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (337)
T 2c29_D 82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW 161 (337)
T ss_dssp EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence 999986431 11 133444554 23345 89999999987 56543 2346788764210 0114
Q ss_pred HHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH----HHHHH---HcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----HVYWL---QKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----~~~~l---~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
.|+.+|+.+|++++++ + ++++||+++|||+... ..... ..|.. +..+ ....|+|++|+|+++
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~i~v~Dva~a~ 238 (337)
T 2c29_D 162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSII-RQGQFVHLDDLCNAH 238 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHH-TEEEEEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCcccccc-CCCCEEEHHHHHHHH
Confidence 7999999999988653 3 7999999999997431 11111 22321 1111 223499999999876
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.9e-21 Score=189.99 Aligned_cols=181 Identities=15% Similarity=0.107 Sum_probs=129.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch----hh---hcCCceeeccCc---c----ccC--CCCE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----EL---INMGITPSLKWT---E----ATQ--KFPY 145 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~----~l---~~~~i~~~~~D~---~----~~~--~~D~ 145 (268)
.+|+|||||+ |+||++|+++|+++ |++|++++|...... .+ ...+++.+.+|. + +++ ++|+
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 4579999997 99999999999999 999999999754321 11 234566676664 1 344 8999
Q ss_pred EEEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC----CCCCCCCCCCCCCCCCHHHH
Q 024417 146 VIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD----NGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 146 Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~----~~~~~E~~~~~p~~~~~y~~ 208 (268)
|||+|+..... . .+.+..+++ +++.++++|||+||.++||... ..+++|+++..|. +.|+.
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~--~~Y~~ 165 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT--NPYGH 165 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC--SHHHH
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCC--ChHHH
Confidence 99999975421 1 123334444 2456889999999999998532 2468898887776 89999
Q ss_pred HHHHHHHHHHHc------C--ceEEEeCceecCCCc------------HHH---HHHHcC--C-c--cC------CCCcc
Q 024417 209 VLLKAEKVILEF------G--GCVLRLAGLYKADRG------------AHV---YWLQKG--T-V--DS------RPDHI 254 (268)
Q Consensus 209 sK~~aE~~l~~~------~--~tIlRp~~vyG~~~~------------~~~---~~l~~g--~-~--~~------~g~~~ 254 (268)
+|+++|++++++ + ++|+||+.+||++.. .+. ..+..+ . + ++ .+++.
T Consensus 166 sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 245 (699)
T 1z45_A 166 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPI 245 (699)
T ss_dssp HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCE
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCee
Confidence 999999998763 3 799999999998421 111 122222 2 2 23 46788
Q ss_pred cCcccHhhHhhcc
Q 024417 255 LNLIHYELPSRLQ 267 (268)
Q Consensus 255 ~~~Ihv~DlA~ai 267 (268)
++|||++|+|+++
T Consensus 246 ~~~i~v~Dva~a~ 258 (699)
T 1z45_A 246 RDYIHVVDLAKGH 258 (699)
T ss_dssp ECEEEHHHHHHHH
T ss_pred EeeEEHHHHHHHH
Confidence 9999999999875
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-22 Score=180.49 Aligned_cols=182 Identities=16% Similarity=0.075 Sum_probs=119.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch------hhh-cCCceeeccCc-------cccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD------ELI-NMGITPSLKWT-------EATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~------~l~-~~~i~~~~~D~-------~~~~~~D~Vi~ 148 (268)
+|+|||||+ ||||++|+++|+++ |++|++++|++++.. .+. ..+++.+.+|. ++++++|+|||
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 578999996 99999999999999 999999999765422 121 13466666664 25679999999
Q ss_pred ccCCCCCC--C--------hHHHHHHHH--HHhcC-CCeEEEEccCe-eecCC-CC--CCCCCCCCCC-----CCC--CC
Q 024417 149 CAPPSRSL--D--------YPGDVRLAA--LSWNG-EGSFLFTSSSA-IYDCS-DN--GACDEDSPVV-----PIG--RS 204 (268)
Q Consensus 149 ~a~~~~~~--~--------~~~~~~~~~--~~~~g-vkr~V~~SS~~-vYg~~-~~--~~~~E~~~~~-----p~~--~~ 204 (268)
+|++.... + .+.++.+++ +.+.+ ++||||+||.+ +|+.. .. .+++|+++.. |.. ..
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 166 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW 166 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence 99864211 1 234455555 23444 89999999987 55421 11 3678876422 110 02
Q ss_pred HHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH----HHHH---HHcCCc--cCC------CCcccCcccHhhH
Q 024417 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----HVYW---LQKGTV--DSR------PDHILNLIHYELP 263 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----~~~~---l~~g~~--~~~------g~~~~~~Ihv~Dl 263 (268)
.|+.+|..+|++++++ + ++++||+.+|||+... .... +..|.. ++. ++..++|+|++|+
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv 246 (338)
T 2rh8_A 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV 246 (338)
T ss_dssp CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence 5999999999987653 3 7999999999997531 1111 123321 111 1123489999999
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 247 a~a~ 250 (338)
T 2rh8_A 247 CRAH 250 (338)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=171.52 Aligned_cols=165 Identities=18% Similarity=0.121 Sum_probs=120.8
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSLD 157 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~~ 157 (268)
+|||||+ |+||++|+++|+++.+|++|++++|++++.+.+...+++.+.+|. ++++++|+|||+|+.... .
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~-~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVG-Q 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCch-H
Confidence 5899997 999999999999864589999999988776666556777777775 257899999999986421 2
Q ss_pred hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCceecC
Q 024417 158 YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYKA 233 (268)
Q Consensus 158 ~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~vyG~ 233 (268)
.....++++ +++.++++|||+||.++|. .| ..|+.+|.++|+++++.+ ++++||+.++++
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~---~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SP---LGLADEHIETEKMLADSGIVYTLLRNGWYSEN 143 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CC---STTHHHHHHHHHHHHHHCSEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------Cc---chhHHHHHHHHHHHHHcCCCeEEEeChHHhhh
Confidence 334455554 2456899999999988762 12 368999999999998877 899999877664
Q ss_pred CCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 234 DRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 234 ~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
....+...+..+.. .+.+++.++++|++|+|+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 178 (286)
T 2zcu_A 144 YLASAPAALEHGVFIGAAGDGKIASATRADYAAAA 178 (286)
T ss_dssp HHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHH
T ss_pred hHHHhHHhhcCCceeccCCCCccccccHHHHHHHH
Confidence 32222223344443 45678899999999999876
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=167.83 Aligned_cols=179 Identities=17% Similarity=0.108 Sum_probs=116.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCc---chhhhc-----CCceeeccCc-------cccCCCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADH---HDELIN-----MGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~---~~~l~~-----~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
++|||||+ ||||++|+++|+++ |++|++++| +++. ...+.. .+++.+.+|. ++++++|+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 68999996 99999999999999 999999998 6532 222211 1244555554 2567999999
Q ss_pred EccCCCCC---C--C-----hHHHHHHHHH--Hhc-CCCeEEEEccCee-ecCC-CCCCCCCCCCC--------CCCCCC
Q 024417 148 FCAPPSRS---L--D-----YPGDVRLAAL--SWN-GEGSFLFTSSSAI-YDCS-DNGACDEDSPV--------VPIGRS 204 (268)
Q Consensus 148 ~~a~~~~~---~--~-----~~~~~~~~~~--~~~-gvkr~V~~SS~~v-Yg~~-~~~~~~E~~~~--------~p~~~~ 204 (268)
|+|++... + + .+.+..+++. .+. ++++|||+||.++ |+.. ...+++|+++. .|. .
T Consensus 80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~--~ 157 (322)
T 2p4h_X 80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF--G 157 (322)
T ss_dssp ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT--T
T ss_pred EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc--c
Confidence 99975421 1 1 1234445542 334 6899999999874 4432 23467787642 122 2
Q ss_pred -HHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH----HHHH---HHcCCccCCCCcccCcccHhhHhhcc
Q 024417 205 -PRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA----HVYW---LQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 205 -~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~----~~~~---l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.|+.+|+.+|++++++ + ++++||+++|||.... .... +..|.....+...++|+|++|+|+++
T Consensus 158 ~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~ 234 (322)
T 2p4h_X 158 WNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAH 234 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHH
Confidence 6999999999988654 3 7999999999996431 1111 12343211222344899999999876
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=156.84 Aligned_cols=164 Identities=13% Similarity=0.036 Sum_probs=118.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+|||+|+ |+||++++++|+++ |++|++++|++++...+...+++.+.+|. +.++++|+|||+++.....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence 68999997 99999999999999 99999999987665443345677777764 2578999999999865431
Q ss_pred C----hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeC
Q 024417 157 D----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (268)
Q Consensus 157 ~----~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~ 228 (268)
+ +.....+++ +++.++++|||+||.++|+..... +. +. ..|+.+|...|+++++.+ ++++||+
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~------~~-~~--~~y~~~K~~~e~~~~~~~i~~~~lrp~ 152 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PP-RL--QAVTDDHIRMHKVLRESGLKYVAVMPP 152 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CG-GG--HHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc------cc-cc--hhHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 1 344455554 245688999999999998754221 11 22 689999999999998877 8999999
Q ss_pred ceecCCCcHHHHHHHcCCc-cCCCCcc-cCcccHhhHhhcc
Q 024417 229 GLYKADRGAHVYWLQKGTV-DSRPDHI-LNLIHYELPSRLQ 267 (268)
Q Consensus 229 ~vyG~~~~~~~~~l~~g~~-~~~g~~~-~~~Ihv~DlA~ai 267 (268)
.++ ++... +.. ...++.. .+++|++|+|+++
T Consensus 153 ~~~-~~~~~-------~~~~~~~~~~~~~~~i~~~Dva~~~ 185 (206)
T 1hdo_A 153 HIG-DQPLT-------GAYTVTLDGRGPSRVISKHDLGHFM 185 (206)
T ss_dssp EEE-CCCCC-------SCCEEESSSCSSCSEEEHHHHHHHH
T ss_pred ccc-CCCCC-------cceEecccCCCCCCccCHHHHHHHH
Confidence 973 33210 111 0001111 5899999999886
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=166.31 Aligned_cols=167 Identities=13% Similarity=0.044 Sum_probs=122.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+|||||+ |+||++++++|+++ +|++|++++|++++...+...+++.+.+|. ++++++|+|||+++.....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 79 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS 79 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSH
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccc
Confidence 47999997 99999999998875 489999999998877766667888888875 2678999999999875432
Q ss_pred -ChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeCcee
Q 024417 157 -DYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLY 231 (268)
Q Consensus 157 -~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~~vy 231 (268)
......++++ +++.++++|||+||. +.. ++.+. .+...+...|+.+.+.+ ++++||+.+|
T Consensus 80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~---~~~------~~~~~------~~~~~~~~~e~~~~~~g~~~~ilrp~~~~ 144 (289)
T 3e48_A 80 FKRIPEVENLVYAAKQSGVAHIIFIGYY---ADQ------HNNPF------HMSPYFGYASRLLSTSGIDYTYVRMAMYM 144 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEES---CCS------TTCCS------TTHHHHHHHHHHHHHHCCEEEEEEECEES
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEEccc---CCC------CCCCC------ccchhHHHHHHHHHHcCCCEEEEeccccc
Confidence 1345555555 356789999999993 321 12221 12233457888888877 8999999999
Q ss_pred cCCCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 232 KADRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 232 G~~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+...+....+..+.. .+.++..++|+|++|+|+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 181 (289)
T 3e48_A 145 DPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGV 181 (289)
T ss_dssp TTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHH
T ss_pred cccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHH
Confidence 9743333333344443 56688999999999999986
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.3e-21 Score=173.91 Aligned_cols=152 Identities=17% Similarity=0.205 Sum_probs=114.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCCCCC-----
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLD----- 157 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~~----- 157 (268)
|||||||+ |+||++|+++|+++ |+ +|++++|+.+ .+.+. ++++++|+|||+|+.....+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~~d-~~~l~-----------~~~~~~d~Vih~a~~~~~~~~~~~~ 66 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQTK-EEELE-----------SALLKADFIVHLAGVNRPEHDKEFS 66 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTTCC-HHHHH-----------HHHHHCSEEEECCCSBCTTCSTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCCCC-HHHHH-----------HHhccCCEEEECCcCCCCCCHHHHH
Confidence 58999996 99999999999999 99 9999999511 11111 24557999999998643321
Q ss_pred --hHHHHHHHH--HHhcCCC-eEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEE
Q 024417 158 --YPGDVRLAA--LSWNGEG-SFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLR 226 (268)
Q Consensus 158 --~~~~~~~~~--~~~~gvk-r~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlR 226 (268)
......+++ +++.+++ +|||+||.++|+ . +.|+.+|+++|++++++ + ++++|
T Consensus 67 ~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~---------------~--~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R 129 (369)
T 3st7_A 67 LGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------D--NPYGESKLQGEQLLREYAEEYGNTVYIYR 129 (369)
T ss_dssp SSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS---------------C--SHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC---------------C--CCchHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 234455555 2456777 999999999987 1 68999999999999873 3 79999
Q ss_pred eCceecCCCcH--------HHHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 227 LAGLYKADRGA--------HVYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 227 p~~vyG~~~~~--------~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+++||++..+ +...+.++.. +..++..++++|++|+|+++
T Consensus 130 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 180 (369)
T 3st7_A 130 WPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEI 180 (369)
T ss_dssp ECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHH
T ss_pred CCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHH
Confidence 99999996531 1223455654 45688999999999999886
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-21 Score=173.27 Aligned_cols=169 Identities=12% Similarity=0.040 Sum_probs=123.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC----cch---hhhcCCceeeccCc-------cccC--CCCE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HHD---ELINMGITPSLKWT-------EATQ--KFPY 145 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~----~~~---~l~~~~i~~~~~D~-------~~~~--~~D~ 145 (268)
.+|+|||||+ |+||++|+++|+++ |++|++++|++. +.+ .+...+++.+.+|. ++++ ++|+
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~ 86 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDI 86 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence 3578999997 99999999999999 999999999762 222 23346788888775 2566 9999
Q ss_pred EEEccCCCCCCChHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 146 VIFCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
|||+++... +....+++ +++.+ +++||+ | +||. ..+|+.+..|. +.|+.+|+.+|+++++.+
T Consensus 87 Vi~~a~~~n----~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p~--~~y~~sK~~~e~~l~~~g~ 152 (346)
T 3i6i_A 87 VVSTVGGES----ILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEPG--LNMYREKRRVRQLVEESGI 152 (346)
T ss_dssp EEECCCGGG----GGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTTH--HHHHHHHHHHHHHHHHTTC
T ss_pred EEECCchhh----HHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCCc--chHHHHHHHHHHHHHHcCC
Confidence 999999753 22334444 24567 999997 4 4663 25666666665 789999999999999987
Q ss_pred -ceEEEeCceecCCCcHHHHHH----HcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRGAHVYWL----QKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~~~~~~l----~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+||.......... ..+.. ++.++..++|+|++|+|+++
T Consensus 153 ~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~ 205 (346)
T 3i6i_A 153 PFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFT 205 (346)
T ss_dssp CBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHH
T ss_pred CEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHH
Confidence 899999999997533222111 22222 56788899999999999986
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=169.73 Aligned_cols=175 Identities=17% Similarity=0.099 Sum_probs=122.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC-----CeEEEEeCCCCcchhhhcCCceeeccCc-------cccCC---CCEEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-----CQIYGQTMTADHHDELINMGITPSLKWT-------EATQK---FPYVIF 148 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G-----~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~---~D~Vi~ 148 (268)
|+|||||+ ||||++|+++|+++ | ++|++++|++.... +...+++.+.+|. +++++ +|+|||
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih 78 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFY 78 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence 58999997 99999999999999 9 99999999866543 2234666776764 24566 999999
Q ss_pred ccCCCCCCC------hHHHHHHHHH--Hhc--CCCeEE-------EEccCeeecCC--CCCCCCCCCCCCCCCCCHHHHH
Q 024417 149 CAPPSRSLD------YPGDVRLAAL--SWN--GEGSFL-------FTSSSAIYDCS--DNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 149 ~a~~~~~~~------~~~~~~~~~~--~~~--gvkr~V-------~~SS~~vYg~~--~~~~~~E~~~~~p~~~~~y~~s 209 (268)
+|+....+. .+.++.+++. ++. ++++|| |+||.++||.. ...+++|+++..|. .+.|
T Consensus 79 ~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~-~~~y--- 154 (364)
T 2v6g_A 79 VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKY-MNFY--- 154 (364)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSS-CCHH---
T ss_pred CCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCcc-chhh---
Confidence 999764321 2344555552 334 789998 89999999874 24578999886652 2677
Q ss_pred HHHHHHHHHHc----C---ceEEEeCceecCCCcH---------HHHHH--HcCCc---cCCC---CcccCcccHhhHhh
Q 024417 210 LLKAEKVILEF----G---GCVLRLAGLYKADRGA---------HVYWL--QKGTV---DSRP---DHILNLIHYELPSR 265 (268)
Q Consensus 210 K~~aE~~l~~~----~---~tIlRp~~vyG~~~~~---------~~~~l--~~g~~---~~~g---~~~~~~Ihv~DlA~ 265 (268)
..+|++++++ + ++++||+.+||++... +...+ .+|.. .+.+ ....+++|++|+|+
T Consensus 155 -~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~ 233 (364)
T 2v6g_A 155 -YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAE 233 (364)
T ss_dssp -HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHH
T ss_pred -HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHH
Confidence 3467777653 2 7999999999986531 12223 34653 3344 24477888899998
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 234 a~ 235 (364)
T 2v6g_A 234 HH 235 (364)
T ss_dssp HH
T ss_pred HH
Confidence 76
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.6e-21 Score=170.12 Aligned_cols=171 Identities=13% Similarity=0.044 Sum_probs=124.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcc--hhhhcCCceeeccCc-------cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~--~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~ 152 (268)
+|+|||||+ |+||++++++|+++ | ++|++++|++++. ..+...+++.+.+|. ++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence 468999997 99999999999999 8 9999999987663 334456788877775 257899999999975
Q ss_pred CCCCC---hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEE
Q 024417 153 SRSLD---YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVL 225 (268)
Q Consensus 153 ~~~~~---~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIl 225 (268)
..... .....++++ +++.++++|||+|+.++|+... +. +. ..|+.+|.+.|+++++.+ ++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~------~~---~~--~~y~~sK~~~e~~~~~~gi~~~il 151 (299)
T 2wm3_A 83 WESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA------GR---LA--AAHFDGKGEVEEYFRDIGVPMTSV 151 (299)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT------TS---CC--CHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC------Cc---cc--CchhhHHHHHHHHHHHCCCCEEEE
Confidence 32111 233444544 2456899999999888887421 11 22 689999999999999876 8999
Q ss_pred EeCceecCCCcHHHH-HHHcCC---c-cCCCCcccCcccHhhHhhcc
Q 024417 226 RLAGLYKADRGAHVY-WLQKGT---V-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 226 Rp~~vyG~~~~~~~~-~l~~g~---~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
||+.+||+....+.. .+..|+ + .+.++..++|||++|+|+++
T Consensus 152 rp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~ 198 (299)
T 2wm3_A 152 RLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVV 198 (299)
T ss_dssp ECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHH
T ss_pred eecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHH
Confidence 999999974321110 122342 1 34578889999999999876
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=162.16 Aligned_cols=170 Identities=16% Similarity=0.095 Sum_probs=119.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc----ccC--CCCEEEEccCCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRSL- 156 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~----~~~--~~D~Vi~~a~~~~~~- 156 (268)
|+|||||+ |+||++++++|+ + |++|++++|+++.. .++.....|.+ .++ ++|+|||+|+....+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~~-----~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 72 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEIQ-----GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDK 72 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCCT-----TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcCC-----CCceeccCCHHHHHHHHHhcCCCEEEECCcccChhh
Confidence 47999997 999999999999 7 89999999986431 12222222322 344 499999999975421
Q ss_pred ---Ch-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcCceE
Q 024417 157 ---DY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224 (268)
Q Consensus 157 ---~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~~tI 224 (268)
++ +.+..+++ ..+.++ +|||+||..+|+... .+++|+++..|. +.|+.+|.+.|++++...+++
T Consensus 73 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~-~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~ 148 (273)
T 2ggs_A 73 CEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK-GNYKEEDIPNPI--NYYGLSKLLGETFALQDDSLI 148 (273)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS-CSBCTTSCCCCS--SHHHHHHHHHHHHHCCTTCEE
T ss_pred hhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC-CCcCCCCCCCCC--CHHHHHHHHHHHHHhCCCeEE
Confidence 11 12233333 234455 999999999998653 378999887776 799999999999998855899
Q ss_pred EEeCceecCCCc--HHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 225 LRLAGLYKADRG--AHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 225 lRp~~vyG~~~~--~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
+||+.+||+... .+...+.++.. ...++ .++++|++|+|+++
T Consensus 149 iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i 193 (273)
T 2ggs_A 149 IRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAI 193 (273)
T ss_dssp EEECCCBSSSSHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHH
T ss_pred EeccccccccHHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHH
Confidence 999999984321 11123345543 22233 88999999999986
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=9.9e-21 Score=159.49 Aligned_cols=162 Identities=12% Similarity=-0.007 Sum_probs=114.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCceeeccCc---cccCC--CCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT---EATQK--FPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~~~~D~---~~~~~--~D~Vi~~a~~~~~ 155 (268)
+|+|||+|+ |+||++++++|+++ |+ +|++++|++++ ...+++.+.+|. +.+.. +|+|||+++....
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~~~--g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~~~~ 78 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIK 78 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSCCSEEEECCCCCHH
T ss_pred CceEEEECCCcHHHHHHHHHHHhC--CCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhhhcEEEECeeeccc
Confidence 468999996 99999999999999 98 99999998765 123566666664 22211 9999999997532
Q ss_pred --CCh-------HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---
Q 024417 156 --LDY-------PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--- 221 (268)
Q Consensus 156 --~~~-------~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--- 221 (268)
.++ .....+++ ..+.++++|||+||.++|+. +. +.|+.+|.+.|+++++.+
T Consensus 79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~~--~~y~~sK~~~e~~~~~~~~~~ 143 (215)
T 2a35_A 79 EAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------SS--IFYNRVKGELEQALQEQGWPQ 143 (215)
T ss_dssp HHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CS--SHHHHHHHHHHHHHTTSCCSE
T ss_pred cCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------Cc--cHHHHHHHHHHHHHHHcCCCe
Confidence 111 22333333 24568899999999998862 22 689999999999999874
Q ss_pred ceEEEeCceecCCCcH-HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 222 GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 ~tIlRp~~vyG~~~~~-~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+||++... +...+. +.....++..++++|++|+|+++
T Consensus 144 ~~~vrp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~Dva~~~ 189 (215)
T 2a35_A 144 LTIARPSLLFGPREEFRLAEILA-APIARILPGKYHGIEACDLARAL 189 (215)
T ss_dssp EEEEECCSEESTTSCEEGGGGTT-CCCC----CHHHHHHHHHHHHHH
T ss_pred EEEEeCceeeCCCCcchHHHHHH-HhhhhccCCCcCcEeHHHHHHHH
Confidence 8999999999997541 111222 12111122378999999999986
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=3.9e-20 Score=168.34 Aligned_cols=169 Identities=12% Similarity=0.044 Sum_probs=124.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhh----cCCceeeccCc-------cccCCCCEEEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----NMGITPSLKWT-------EATQKFPYVIF 148 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~----~~~i~~~~~D~-------~~~~~~D~Vi~ 148 (268)
+.+|+|||||+ |+||++|+++|+++ +|+ +|++++|++.+...+. ..+++.+.+|. ++++++|+|||
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHH-CCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhh-CCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 34578999996 99999999999986 376 9999999866543332 24677777775 25789999999
Q ss_pred ccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 024417 149 CAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (268)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~ 215 (268)
+|+..... + .+.+..+++ +...++++||++||...|. |. +.|+.+|+.+|+
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------------p~--~~Y~~sK~~~E~ 161 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------------PI--NLYGATKLCSDK 161 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------------CC--SHHHHHHHHHHH
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------------Cc--cHHHHHHHHHHH
Confidence 99975421 1 122334444 2456899999999965432 33 789999999999
Q ss_pred HHHHc-------C--ceEEEeCceecCCCcHH---HHHHHcCC-c--cCCCCcccCcccHhhHhhcc
Q 024417 216 VILEF-------G--GCVLRLAGLYKADRGAH---VYWLQKGT-V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 216 ~l~~~-------~--~tIlRp~~vyG~~~~~~---~~~l~~g~-~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++.+ + ++++||+++||++.... ...+..|. . +..++..++|+|++|+|+++
T Consensus 162 ~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v 228 (344)
T 2gn4_A 162 LFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFV 228 (344)
T ss_dssp HHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHH
T ss_pred HHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHH
Confidence 98764 2 69999999999976532 23345565 3 45677888999999999876
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.82 E-value=6.6e-20 Score=157.51 Aligned_cols=165 Identities=16% Similarity=0.066 Sum_probs=117.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
+|+|||||+ |+||++++++|+++ |+ +|++++|++++...+...+++.+.+|. +.++++|+|||+|+..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 468999996 99999999999999 99 999999987765443334566666664 2567999999999975
Q ss_pred CCCC--------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024417 154 RSLD--------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (268)
Q Consensus 154 ~~~~--------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~-- 221 (268)
.... ...+..+++ +.+.++++||++||.++|+. +. ..|+.+|.+.|++++..+
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~~--~~Y~~sK~~~e~~~~~~~~~ 160 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------SN--FLYLQVKGEVEAKVEELKFD 160 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------CS--SHHHHHHHHHHHHHHTTCCS
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------Cc--chHHHHHHHHHHHHHhcCCC
Confidence 3211 112233333 24567899999999988862 12 589999999999998874
Q ss_pred -ceEEEeCceecCCCcH-HHHH----HHcCCccCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRGA-HVYW----LQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~~-~~~~----l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+||+.... .... +....+. ......+++++|+|+++
T Consensus 161 ~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~ 210 (242)
T 2bka_A 161 RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPD--SWASGHSVPVVTVVRAM 210 (242)
T ss_dssp EEEEEECCEEECTTGGGSHHHHHHHHHHCSCCT--TGGGGTEEEHHHHHHHH
T ss_pred CeEEEcCceecCCCCCCcHHHHHHHHhhcccCc--cccCCcccCHHHHHHHH
Confidence 7999999999996432 1111 2211111 11124589999999876
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.9e-20 Score=158.15 Aligned_cols=169 Identities=15% Similarity=0.042 Sum_probs=112.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccC
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAP 151 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~ 151 (268)
.++||+|||||+ |+||++++++|+++ | ++|++++|++++...+...+++.+.+|. ++++++|+|||+++
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~ 97 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLT 97 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECC
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCC
Confidence 355788999996 99999999999999 9 8999999998776655556777777775 25789999999998
Q ss_pred CCCCCChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEE
Q 024417 152 PSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGA--CDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVL 225 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~--~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIl 225 (268)
... +....++++ +++.++++||++||.++|+.....+ ..|..+. .+...+..+|+++.+.+ ++++
T Consensus 98 ~~~---~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~gi~~~~v 168 (236)
T 3qvo_A 98 GED---LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG------EPLKPFRRAADAIEASGLEYTIL 168 (236)
T ss_dssp STT---HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------C------GGGHHHHHHHHHHHTSCSEEEEE
T ss_pred CCc---hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhccc------chHHHHHHHHHHHHHCCCCEEEE
Confidence 642 333344444 3567899999999999998653322 2333222 22234566788888877 8999
Q ss_pred EeCceecCCCcHHHHHHHcCCccCCCC-cccCcccHhhHhhcc
Q 024417 226 RLAGLYKADRGAHVYWLQKGTVDSRPD-HILNLIHYELPSRLQ 267 (268)
Q Consensus 226 Rp~~vyG~~~~~~~~~l~~g~~~~~g~-~~~~~Ihv~DlA~ai 267 (268)
||+.++++..... .....+. ....+++.+|+|+++
T Consensus 169 rPg~i~~~~~~~~-------~~~~~~~~~~~~~i~~~DvA~~i 204 (236)
T 3qvo_A 169 RPAWLTDEDIIDY-------ELTSRNEPFKGTIVSRKSVAALI 204 (236)
T ss_dssp EECEEECCSCCCC-------EEECTTSCCSCSEEEHHHHHHHH
T ss_pred eCCcccCCCCcce-------EEeccCCCCCCcEECHHHHHHHH
Confidence 9999998743210 0111111 123589999999876
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=161.01 Aligned_cols=174 Identities=14% Similarity=0.108 Sum_probs=117.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~ 154 (268)
+||+|||||+ |+||++++++|+++.+|++|++++|++++.+.+ ..+++.+.+|. +.++++|+|||+|+...
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4689999997 999999999999983369999999986554443 23566666664 25789999999998532
Q ss_pred C------------CC------------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 155 S------------LD------------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 155 ~------------~~------------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
. .+ ......+++ +++.++++|||+||.++|.. ..+..+.....|+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~~~~y~~ 153 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLGNGNILV 153 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGGGCCHHH
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCccccccchhHHH
Confidence 1 10 122334444 24557899999999886532 22222222245888
Q ss_pred HHHHHHHHHHHcC--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|..+|+++++.+ ++++||+.+||+...... +..+......+...+++|++|+|+++
T Consensus 154 sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dva~~~ 212 (253)
T 1xq6_A 154 WKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE--LLVGKDDELLQTDTKTVPRADVAEVC 212 (253)
T ss_dssp HHHHHHHHHHTSSSCEEEEEECEEECSCSSSSC--EEEESTTGGGGSSCCEEEHHHHHHHH
T ss_pred HHHHHHHHHHhCCCceEEEecceeecCCcchhh--hhccCCcCCcCCCCcEEcHHHHHHHH
Confidence 9999999998876 899999999998643110 00111000011235699999999876
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-20 Score=158.54 Aligned_cols=166 Identities=13% Similarity=-0.021 Sum_probs=117.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHH-hcCCCCeEEEEeCCCC-cchhh--hcCCceeeccCc-------cccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWR-QEHPGCQIYGQTMTAD-HHDEL--INMGITPSLKWT-------EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~-~~~~G~~V~~~~R~~~-~~~~l--~~~~i~~~~~D~-------~~~~~~D~Vi~~a~ 151 (268)
|++|||||+ |+||++++++|+ ++ |++|++++|+++ +.+.+ ...+++.+.+|. +.++++|+|||+++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag 82 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAM 82 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCC
Confidence 455999996 999999999999 78 999999999877 66555 345677777765 25789999999998
Q ss_pred CCCCCChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHcC--ceEEE
Q 024417 152 PSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS-PRTDVLLKAEKVILEFG--GCVLR 226 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~-~y~~sK~~aE~~l~~~~--~tIlR 226 (268)
... .+ .++++ +++.++++||++||.++|+.... ...+.... .. . .|+.+|...|+++++.+ ++++|
T Consensus 83 ~~n----~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~-~~~~~~~~-~~--~~~y~~~K~~~e~~~~~~~i~~~~vr 153 (221)
T 3r6d_A 83 ESG----SD-MASIVKALSRXNIRRVIGVSMAGLSGEFPV-ALEKWTFD-NL--PISYVQGERQARNVLRESNLNYTILR 153 (221)
T ss_dssp CCH----HH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCH-HHHHHHHH-TS--CHHHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCC----hh-HHHHHHHHHhcCCCeEEEEeeceecCCCCc-cccccccc-cc--ccHHHHHHHHHHHHHHhCCCCEEEEe
Confidence 642 33 55554 35678899999999999875321 11110000 11 3 79999999999999887 89999
Q ss_pred eCceecCC-CcHHHHHHHcCCccCCCC-cccCcccHhhHhhcc
Q 024417 227 LAGLYKAD-RGAHVYWLQKGTVDSRPD-HILNLIHYELPSRLQ 267 (268)
Q Consensus 227 p~~vyG~~-~~~~~~~l~~g~~~~~g~-~~~~~Ihv~DlA~ai 267 (268)
|+.++++. .... .....+. ....+++.+|+|+++
T Consensus 154 pg~v~~~~~~~~~-------~~~~~~~~~~~~~~~~~dvA~~~ 189 (221)
T 3r6d_A 154 LTWLYNDPEXTDY-------ELIPEGAQFNDAQVSREAVVKAI 189 (221)
T ss_dssp ECEEECCTTCCCC-------EEECTTSCCCCCEEEHHHHHHHH
T ss_pred chhhcCCCCCcce-------eeccCCccCCCceeeHHHHHHHH
Confidence 99999872 2110 0011111 122389999999876
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.8e-20 Score=163.51 Aligned_cols=173 Identities=12% Similarity=-0.016 Sum_probs=118.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chh---hhcCCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDE---LINMGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~---l~~~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
||+|||+|+ |+||++++++|+++ |++|++++|+... ... +...+++.+.+|. ++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 678999997 99999999999999 9999999998532 111 2345788887775 2578999999
Q ss_pred EccCCCCCCChHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--c
Q 024417 148 FCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (268)
Q Consensus 148 ~~a~~~~~~~~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~ 222 (268)
|+++....+......++++ +++.| ++|||+ | +||.....+ +.+..|. ...| .+|.++|+++++.+ +
T Consensus 82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~-~~~y-~sK~~~e~~~~~~g~~~ 152 (313)
T 1qyd_A 82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPG-SITF-IDKRKVRRAIEAASIPY 152 (313)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSST-THHH-HHHHHHHHHHHHTTCCB
T ss_pred ECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCC-cchH-HHHHHHHHHHHhcCCCe
Confidence 9998753322222334443 24567 999996 3 466432221 2233332 1467 99999999999887 8
Q ss_pred eEEEeCceecCCCcHHHHH-----HHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRGAHVYW-----LQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~~~-----l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++||+.++|.....+... ...+.. .+.++..++++|++|+|+++
T Consensus 153 ~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~ 204 (313)
T 1qyd_A 153 TYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT 204 (313)
T ss_dssp CEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred EEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHH
Confidence 9999999987422111100 111221 45678899999999999876
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=163.92 Aligned_cols=166 Identities=14% Similarity=0.154 Sum_probs=119.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc--hhhhc-CCceeeccC-c-------cccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELIN-MGITPSLKW-T-------EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~--~~l~~-~~i~~~~~D-~-------~~~~~~D~Vi~~a~ 151 (268)
+|+|||||+ |+||++|+++|+++ |++|++++|++++. ..+.. .+++.+.+| . ++++++|+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence 468999997 99999999999999 99999999987664 33433 367777777 5 25789999999987
Q ss_pred CCCCCChHHHHHHHH--HHhcC-CCeEEEEccCe--eecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceE
Q 024417 152 PSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSA--IYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~--~~~~g-vkr~V~~SS~~--vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tI 224 (268)
......+... ++++ +++.+ +++|||+||.. .|+. . +. +.|+.+|+++|+++++.+ +++
T Consensus 83 ~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~-~~--~~y~~sK~~~E~~~~~~gi~~~i 147 (352)
T 1xgk_A 83 SQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------W-PA--VPMWAPKFTVENYVRQLGLPSTF 147 (352)
T ss_dssp STTSCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------C-CC--CTTTHHHHHHHHHHHTSSSCEEE
T ss_pred CCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------C-CC--ccHHHHHHHHHHHHHHcCCCEEE
Confidence 6432223333 5554 24567 99999999975 3331 1 11 568899999999999876 899
Q ss_pred EEeCceecCCCcHHHH------HHHcCCc----cCCCCcccCcccH-hhHhhcc
Q 024417 225 LRLAGLYKADRGAHVY------WLQKGTV----DSRPDHILNLIHY-ELPSRLQ 267 (268)
Q Consensus 225 lRp~~vyG~~~~~~~~------~l~~g~~----~~~g~~~~~~Ihv-~DlA~ai 267 (268)
+||+ +||++...... ...+|.+ ++.+++.++++|+ +|+|+++
T Consensus 148 vrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai 200 (352)
T 1xgk_A 148 VYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL 200 (352)
T ss_dssp EEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred Eecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHH
Confidence 9986 68876431100 0123442 3457889999999 8999876
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.3e-19 Score=156.35 Aligned_cols=168 Identities=17% Similarity=0.128 Sum_probs=116.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-------Ccch---hhhcCCceeeccCc-------cccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------DHHD---ELINMGITPSLKWT-------EATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-------~~~~---~l~~~~i~~~~~D~-------~~~~~~D~ 145 (268)
|++|||+|+ |+||++|+++|+++ |++|++++|++ ++.. .+...+++.+.+|. ++++++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 678999997 99999999999999 99999999986 2222 22345788777775 25789999
Q ss_pred EEEccCCCCCCChHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 146 VIFCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
|||+++.... ....+++ +++.| +++||+ | +||.. .+|..+..|. .+.| .+|...|+++++.+
T Consensus 80 vi~~a~~~~~----~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~i 145 (307)
T 2gas_A 80 VICAAGRLLI----EDQVKIIKAIKEAGNVKKFFP-S---EFGLD----VDRHDAVEPV-RQVF-EEKASIRRVIEAEGV 145 (307)
T ss_dssp EEECSSSSCG----GGHHHHHHHHHHHCCCSEEEC-S---CCSSC----TTSCCCCTTH-HHHH-HHHHHHHHHHHHHTC
T ss_pred EEECCccccc----ccHHHHHHHHHhcCCceEEee-c---ccccC----cccccCCCcc-hhHH-HHHHHHHHHHHHcCC
Confidence 9999987542 2223333 24566 999984 3 46642 1333333341 1468 99999999999876
Q ss_pred -ceEEEeCceecCCCcHHHHH---H-HcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRGAHVYW---L-QKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~~~~~~---l-~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+++.....+... . ..+.. .+.++..++++|++|+|+++
T Consensus 146 ~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 198 (307)
T 2gas_A 146 PYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFT 198 (307)
T ss_dssp CBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHH
T ss_pred CeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHH
Confidence 89999999887532211100 0 11122 35677889999999999876
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.2e-18 Score=154.65 Aligned_cols=170 Identities=16% Similarity=0.082 Sum_probs=116.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc------h---hhhcCCceeeccCc-------cccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH------D---ELINMGITPSLKWT-------EATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~------~---~l~~~~i~~~~~D~-------~~~~~~D~V 146 (268)
|++|+|+|+ |+||++|+++|+++ |++|++++|+.... . .+...+++.+.+|. ++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 678999997 99999999999999 99999999985422 1 22345788887775 256799999
Q ss_pred EEccCCCCCCChHHHHHHHHHHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ce
Q 024417 147 IFCAPPSRSLDYPGDVRLAALSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (268)
Q Consensus 147 i~~a~~~~~~~~~~~~~~~~~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~t 223 (268)
||+++..... ....+...+ ++.+ +++||+ | +||.. .+|..+..|. ...| .+|.++|+++++.+ ++
T Consensus 82 i~~a~~~~~~-~~~~l~~aa-~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~ 149 (308)
T 1qyc_A 82 ISTVGSLQIE-SQVNIIKAI-KEVGTVKRFFP-S---EFGND----VDNVHAVEPA-KSVF-EVKAKVRRAIEAEGIPYT 149 (308)
T ss_dssp EECCCGGGSG-GGHHHHHHH-HHHCCCSEEEC-S---CCSSC----TTSCCCCTTH-HHHH-HHHHHHHHHHHHHTCCBE
T ss_pred EECCcchhhh-hHHHHHHHH-HhcCCCceEee-c---ccccC----ccccccCCcc-hhHH-HHHHHHHHHHHhcCCCeE
Confidence 9999864321 112222222 4456 999985 4 36632 2333443342 1467 89999999999876 89
Q ss_pred EEEeCceecCCCcHHHHH---H-HcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 224 VLRLAGLYKADRGAHVYW---L-QKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 224 IlRp~~vyG~~~~~~~~~---l-~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
++||+.++|.....+... . ..+.. .+.++..++|+|++|+|+++
T Consensus 150 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 199 (308)
T 1qyc_A 150 YVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFT 199 (308)
T ss_dssp EEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred EEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHH
Confidence 999999987532111100 0 11121 45678899999999999875
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.6e-18 Score=155.04 Aligned_cols=167 Identities=15% Similarity=0.060 Sum_probs=115.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchh---hhcCCceeeccCc-------cccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE---LINMGITPSLKWT-------EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~---l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~ 151 (268)
|++|||+|+ |+||++|+++|+++ |++|++++|+++ +... +...+++.+.+|. ++++++|+|||+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 458999997 99999999999999 999999999875 3222 3346788887775 26789999999998
Q ss_pred CCCCCChHHHHHHHHHHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEeC
Q 024417 152 PSRSLDYPGDVRLAALSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp~ 228 (268)
..... ....+...+ ++.+ +++||+ | +||.. .+|..+..|. ...| .+|.+.|+++++.+ ++++||+
T Consensus 89 ~~~~~-~~~~l~~aa-~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~~lr~~ 156 (318)
T 2r6j_A 89 FPQIL-DQFKILEAI-KVAGNIKRFLP-S---DFGVE----EDRINALPPF-EALI-ERKRMIRRAIEEANIPYTYVSAN 156 (318)
T ss_dssp GGGST-THHHHHHHH-HHHCCCCEEEC-S---CCSSC----TTTCCCCHHH-HHHH-HHHHHHHHHHHHTTCCBEEEECC
T ss_pred hhhhH-HHHHHHHHH-HhcCCCCEEEe-e---ccccC----cccccCCCCc-chhH-HHHHHHHHHHHhcCCCeEEEEcc
Confidence 64321 122222222 4556 999985 3 46642 1333333331 1357 89999999999877 8999999
Q ss_pred ceecCCCcHHHHHHH---cC-Cc--cCCCCcccCcccHhhHhhcc
Q 024417 229 GLYKADRGAHVYWLQ---KG-TV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 229 ~vyG~~~~~~~~~l~---~g-~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+++. .....+. .+ .. .+.++..++|+|++|+|+++
T Consensus 157 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 198 (318)
T 2r6j_A 157 CFASY---FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYT 198 (318)
T ss_dssp EEHHH---HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred eehhh---hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHH
Confidence 88763 1111121 12 22 45678899999999999875
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.75 E-value=5.2e-19 Score=158.17 Aligned_cols=169 Identities=13% Similarity=0.038 Sum_probs=115.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-C-----cchh---hhcCCceeeccCc-------cccCCCCE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-D-----HHDE---LINMGITPSLKWT-------EATQKFPY 145 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~-----~~~~---l~~~~i~~~~~D~-------~~~~~~D~ 145 (268)
+||+|||+|+ |+||++|+++|+++ |++|++++|++ . +... +...+++.+.+|. ++++++|+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCE
Confidence 3678999997 99999999999999 99999999986 2 1111 2345788887775 26789999
Q ss_pred EEEccCCCCCCChHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 146 VIFCAPPSRSLDYPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
|||+++.... ...++++ +++.+ +++||+ | +||.. .+|+.+..|. .+.| .+|...|+++++.+
T Consensus 81 vi~~a~~~~~----~~~~~l~~aa~~~g~v~~~v~-S---~~g~~----~~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~ 146 (321)
T 3c1o_A 81 VISALPFPMI----SSQIHIINAIKAAGNIKRFLP-S---DFGCE----EDRIKPLPPF-ESVL-EKKRIIRRAIEAAAL 146 (321)
T ss_dssp EEECCCGGGS----GGGHHHHHHHHHHCCCCEEEC-S---CCSSC----GGGCCCCHHH-HHHH-HHHHHHHHHHHHHTC
T ss_pred EEECCCccch----hhHHHHHHHHHHhCCccEEec-c---ccccC----ccccccCCCc-chHH-HHHHHHHHHHHHcCC
Confidence 9999986431 1223333 24567 999983 3 46642 1333333331 1468 99999999998876
Q ss_pred -ceEEEeCceecCCCcHHHHH----HHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 222 -GCVLRLAGLYKADRGAHVYW----LQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -~tIlRp~~vyG~~~~~~~~~----l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+++.....+... ...+.. .+.++..++++|++|+|+++
T Consensus 147 ~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~ 199 (321)
T 3c1o_A 147 PYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYT 199 (321)
T ss_dssp CBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHH
T ss_pred CeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHH
Confidence 89999999887421111100 111222 45678899999999999876
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.66 E-value=8.6e-17 Score=138.53 Aligned_cols=169 Identities=11% Similarity=-0.045 Sum_probs=109.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----cc----CCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----AT----QKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~----~~~D~Vi~~a~ 151 (268)
|++|||||+ |+||++++++|+++ |++|++++|++++.+. . +.+|. + .+ .++|+|||+|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~----~---~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag 71 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEA----D---LSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----C---TTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccc----c---ccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence 678999997 99999999999999 9999999998765421 1 23332 1 22 48999999999
Q ss_pred CCC-CCChHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCC-CCC-------CCCCC-------CCCCC
Q 024417 152 PSR-SLDYPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDN-GAC-------DEDSP-------VVPIG 202 (268)
Q Consensus 152 ~~~-~~~~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~-~~~-------~E~~~-------~~p~~ 202 (268)
... ..++.+ +..+++ .++.+.+++|++||..+|+.... .+. +|+.+ ..+.
T Consensus 72 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 150 (255)
T 2dkn_A 72 VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTH- 150 (255)
T ss_dssp CCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHH-
T ss_pred CCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcc-
Confidence 765 333221 122222 12346789999999999864311 111 11110 1122
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcC---Cc--cCCCCcccCcccHhhHhhcc
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKG---TV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g---~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.|+.+|.+.|.+++.+ + ++++||+.++|+..... +... .. ...+ ....+++++|+|+++
T Consensus 151 -~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~dva~~~ 224 (255)
T 2dkn_A 151 -LAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS---KADPRYGESTRRFVA-PLGRGSEPREVAEAI 224 (255)
T ss_dssp -HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH---HHCTTTHHHHHSCCC-TTSSCBCHHHHHHHH
T ss_pred -hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc---ccchhhHHHHHHHHH-HhcCCCCHHHHHHHH
Confidence 58999999999887764 3 68999999998742211 1111 00 0112 455799999999876
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=7.2e-15 Score=126.18 Aligned_cols=164 Identities=13% Similarity=0.022 Sum_probs=108.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c----c---cCCCCEEEEc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----A---TQKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~----~---~~~~D~Vi~~ 149 (268)
..+++||||+ |+||++++++|+++ |++|++++|++++.+.+.. .+++.+.+|. + . ...+|+|||+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 3468999997 99999999999999 9999999998665444322 2555566664 1 2 2368999999
Q ss_pred cCCCCCCC--------hHH-------HHHHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 150 APPSRSLD--------YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 150 a~~~~~~~--------~~~-------~~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
|+...... +.+ +..+++ ..+.+ .++||++||...|... .+. ..|+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~ 150 (244)
T 1cyd_A 84 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-----------PNL--ITYS 150 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTB--HHHH
T ss_pred CcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC-----------CCc--chhH
Confidence 98543211 111 111111 12234 6899999998876532 112 5899
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...|.+++.+ + ++++||+.++++.... ....+.++. ....+++++|+|+++
T Consensus 151 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~ 219 (244)
T 1cyd_A 151 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH------PLRKFAEVEDVVNSI 219 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcC------CccCCCCHHHHHHHH
Confidence 9999999887653 2 5899999999863211 111222222 235789999999876
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.56 E-value=1e-14 Score=128.23 Aligned_cols=170 Identities=14% Similarity=0.028 Sum_probs=107.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
.++++||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..++.+.+|. + ...++|
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence 3578999997 99999999999999 9999999998776655432 2455666664 1 134899
Q ss_pred EEEEccCCCCCC---C-----hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+..... + +.+ + ++.++ .++.+.+++|++||...+.. ..+.
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~~-- 148 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-----------FAGF-- 148 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-----------CTTC--
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC-----------CCCc--
Confidence 999999853211 1 111 1 12222 13456789999999765432 1122
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc-----------HHHHHHHcCCccCCCCcccCcccHhhH
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-----------AHVYWLQKGTVDSRPDHILNLIHYELP 263 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~-----------~~~~~l~~g~~~~~g~~~~~~Ihv~Dl 263 (268)
..|+.+|...|.+.+.+ + .+++|||.++++-.. ....................+.+++|+
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 228 (281)
T 3m1a_A 149 SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKA 228 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHH
Confidence 68999999999877643 3 689999999876311 011111111111122334567889999
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 229 a~a~ 232 (281)
T 3m1a_A 229 AAAI 232 (281)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.52 E-value=5.3e-14 Score=117.45 Aligned_cols=149 Identities=13% Similarity=0.039 Sum_probs=97.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc-------ccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-------ATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~-------~~~~~D~Vi~~a~~~~~ 155 (268)
+|+|||||+ |+||++++++|+ + |++|++++|+++. +.....|.+ ....+|+|||+|+....
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~~--------~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 71 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSGD--------VTVDITNIDSIKKMYEQVGKVDAIVSATGSATF 71 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSSS--------EECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCccc--------eeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 458999997 999999999999 9 9999999997641 111112221 22468999999985432
Q ss_pred CC--------hHH-------HHHHHHH--Hhc--CCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q 024417 156 LD--------YPG-------DVRLAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (268)
Q Consensus 156 ~~--------~~~-------~~~~~~~--~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~ 216 (268)
.. +.+ +..+++. ... ..+++|++||...+... .+. ..|+.+|...|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-----------VQG--ASAAMANGAVTAF 138 (202)
T ss_dssp CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC-----------TTC--HHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC-----------Ccc--HHHHHHHHHHHHH
Confidence 11 111 1112221 111 12689999997654321 122 5899999999988
Q ss_pred HHHc------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 217 ILEF------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 217 l~~~------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+.+ + ++++||+.++++... ... ......+++++|+|+++
T Consensus 139 ~~~~~~e~~~gi~v~~v~pg~v~~~~~~-----~~~------~~~~~~~~~~~dva~~~ 186 (202)
T 3d7l_A 139 AKSAAIEMPRGIRINTVSPNVLEESWDK-----LEP------FFEGFLPVPAAKVARAF 186 (202)
T ss_dssp HHHHTTSCSTTCEEEEEEECCBGGGHHH-----HGG------GSTTCCCBCHHHHHHHH
T ss_pred HHHHHHHccCCeEEEEEecCccCCchhh-----hhh------hccccCCCCHHHHHHHH
Confidence 8753 3 689999999986321 111 12345689999999875
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=8.8e-14 Score=119.99 Aligned_cols=163 Identities=12% Similarity=0.052 Sum_probs=106.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c----c-------cCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E----A-------TQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~----~-------~~~ 142 (268)
.++|||||+ |+||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + . ..+
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 468999997 99999999999999 99999999986554332 11 2344555664 1 1 238
Q ss_pred CCEEEEccCCCCCC----C---hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL----D---YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~----~---~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
+|+|||+|+..... . +.+ +..++. .++.+.++||++||...|... .+.
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~- 156 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-----------INM- 156 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTC-
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC-----------CCC-
Confidence 99999999864321 1 111 111111 124567899999998776421 122
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc----H-HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----A-HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~----~-~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ++++||+.++++... + ....+..+.+ ...+++++|+|+++
T Consensus 157 -~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~ 228 (255)
T 1fmc_A 157 -TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTP------IRRLGQPQDIANAA 228 (255)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCS------SCSCBCHHHHHHHH
T ss_pred -cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCC------cccCCCHHHHHHHH
Confidence 68999999999877654 3 689999999986311 1 1112222222 23478999999875
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=5.5e-14 Score=122.91 Aligned_cols=168 Identities=15% Similarity=0.077 Sum_probs=108.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c----c-------cC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~----~-------~~ 141 (268)
+..++|||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + . ..
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 44578999997 99999999999999 9999999997654333211 1456666664 1 1 24
Q ss_pred CCCEEEEccCCCCC-----CC-----hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS-----LD-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-----~~-----~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
++|+|||+|+.... .+ +.+. ..+++ ..+.+.+++|++||...|....
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------- 161 (278)
T 2bgk_A 92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------- 161 (278)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------
Confidence 89999999985421 11 1111 11111 1234678999999998875321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-------HHHHHHcCCccCCCCcccCcccHhh
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYEL 262 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-------~~~~l~~g~~~~~g~~~~~~Ihv~D 262 (268)
.+. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+.... +.....+++.+|
T Consensus 162 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d 235 (278)
T 2bgk_A 162 GVS--HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA----ANLKGTLLRAED 235 (278)
T ss_dssp TSC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT----CSSCSCCCCHHH
T ss_pred CCC--cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc----cccccccCCHHH
Confidence 122 58999999999877653 3 6899999999985321 111111111 112345789999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 236 va~~~ 240 (278)
T 2bgk_A 236 VADAV 240 (278)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-13 Score=117.10 Aligned_cols=163 Identities=14% Similarity=0.065 Sum_probs=106.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c----c---cCCCCEEEEcc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E----A---TQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~----~---~~~~D~Vi~~a 150 (268)
.++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. .+++.+.+|. + . ...+|+|||+|
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 7 GRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence 468999997 99999999999999 9999999998765544322 2455556664 1 2 24689999999
Q ss_pred CCCCCCC--------hHH-------HHHHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 151 PPSRSLD--------YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 151 ~~~~~~~--------~~~-------~~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
+...... +.+ +..++. ..+.+ .+++|++||...|... .+. ..|+.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~~ 151 (244)
T 3d3w_A 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------TNH--SVYCS 151 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TTB--HHHHH
T ss_pred ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------CCC--chHHH
Confidence 8643211 111 111111 12234 6899999998765421 122 68999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecCCCcH------HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGA------HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~------~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|...|.+.+.+ + .+++||+.++++.... ....+..+ .....+++++|+|+++
T Consensus 152 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~ 219 (244)
T 3d3w_A 152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR------IPLGKFAEVEHVVNAI 219 (244)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHT------CTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhh------CCCCCCcCHHHHHHHH
Confidence 999999887653 2 5899999999874211 11112111 1224588999999875
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.50 E-value=3.7e-13 Score=116.46 Aligned_cols=165 Identities=9% Similarity=0.034 Sum_probs=106.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc--CCceeeccCc---c----c-------cCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN--MGITPSLKWT---E----A-------TQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~--~~i~~~~~D~---~----~-------~~~ 142 (268)
.++|||||+ |+||++++++|+++ |++|++++|+.++.+. +.. ..+..+.+|. + . ..+
T Consensus 13 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 13 NRVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 9999999998654332 221 2355566664 1 1 247
Q ss_pred CCEEEEccCCCC-CC---C-----hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSR-SL---D-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~-~~---~-----~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+... .. + +.+. ..+++ ..+.+..++|++||...+... +..+
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~ 161 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQ 161 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSC
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCC
Confidence 999999998543 11 1 1111 11111 123467899999997654321 1112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc-HH-----HHHHHcCCccCCCCcccCcccHhhHhh
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-AH-----VYWLQKGTVDSRPDHILNLIHYELPSR 265 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~-~~-----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ 265 (268)
. ..|+.+|...|.+++.+ + ++++||+.++++... .. ...+..+.+ ...+++.+|+|+
T Consensus 162 ~--~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~ 233 (260)
T 3awd_A 162 Q--AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP------MGRVGQPDEVAS 233 (260)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT------TSSCBCHHHHHH
T ss_pred c--cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC------cCCCCCHHHHHH
Confidence 2 58999999999877653 3 699999999998643 11 111222211 234788999998
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 234 ~~ 235 (260)
T 3awd_A 234 VV 235 (260)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=4.2e-13 Score=115.71 Aligned_cols=165 Identities=10% Similarity=-0.036 Sum_probs=106.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCc-eeeccCc---c----c------cCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGI-TPSLKWT---E----A------TQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i-~~~~~D~---~----~------~~~~D~ 145 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+.. ..+ ..+.+|. + . ..++|+
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 468999997 99999999999999 9999999998665443321 123 4455554 1 1 258999
Q ss_pred EEEccCCCCCC---C-----hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+..... + +.+ + ++.++ .++.+.++||++||...|... +..|. .
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~~--~ 157 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVN---------RPQFA--S 157 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSCB--H
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCC---------CCCcc--h
Confidence 99999864321 1 111 1 11111 134567899999998765432 11122 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH------HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~------~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.|+.+|...|.+.+.+ + ++++||+.++++..... ...+.... ....+++.+|+|+++
T Consensus 158 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~ 229 (254)
T 2wsb_A 158 SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMT------PMGRCGEPSEIAAAA 229 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTS------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcC------CCCCCCCHHHHHHHH
Confidence 8999999998877643 3 68999999998632111 11111111 123478999999875
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.49 E-value=1.7e-13 Score=119.33 Aligned_cols=168 Identities=17% Similarity=0.059 Sum_probs=94.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c----c-------c-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E----A-------T- 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~----~-------~- 140 (268)
..++|||||+ |+||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + . .
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3478999997 99999999999999 99999999986554332 21 2345555664 1 1 2
Q ss_pred CCCCEEEEccCCCCCC-----C---hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL-----D---YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~-----~---~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.++|+|||+|+..... . +.+ +..+++ .++.+.+++|++||...|... .
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 159 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA-----------S 159 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCC-----------C
Confidence 6899999999854321 1 111 111111 134578999999998766421 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.++++...... ..... .. ........+++.+|+|+++
T Consensus 160 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~dva~~~ 233 (266)
T 1xq1_A 160 VG--SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKK-VV-ISRKPLGRFGEPEEVSSLV 233 (266)
T ss_dssp -C--CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---------------------------CCGGGGHHHH
T ss_pred CC--chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHH-HH-HhcCCCCCCcCHHHHHHHH
Confidence 22 68999999998877653 3 689999999988532211 00000 00 0111122477889998865
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.49 E-value=4e-13 Score=115.64 Aligned_cols=163 Identities=10% Similarity=-0.032 Sum_probs=106.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeeccCc---c----c-------cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~~D~---~----~-------~~ 141 (268)
++++||||+ |+||++++++|+++ |++|++++|++++.+.+. ...+..+.+|. + . ..
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 468999997 99999999999999 999999999865543321 12345555664 1 1 24
Q ss_pred CCCEEEEccCCCCCCC-----------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD-----------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-----------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
++|+|||+|+...... +.+.+ +.++ .++.+.+++|++||...|...
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 149 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF---------- 149 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC----------
Confidence 8999999998543210 11111 1111 123467899999998765421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-H-----HHHHHcCCccCCCCcccCcccHhh
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-H-----VYWLQKGTVDSRPDHILNLIHYEL 262 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-~-----~~~l~~g~~~~~g~~~~~~Ihv~D 262 (268)
.+. ..|+.+|...|.+.+.+ + ++++||+.++++.... . ...+..+. ....+.+.+|
T Consensus 150 -~~~--~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~d 220 (250)
T 2cfc_A 150 -PGR--SAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARI------PQKEIGTAAQ 220 (250)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTC------TTCSCBCHHH
T ss_pred -CCc--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcC------CCCCCcCHHH
Confidence 122 68999999999877654 3 6899999999986432 1 11122211 1234778999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 221 va~~~ 225 (250)
T 2cfc_A 221 VADAV 225 (250)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=2.2e-13 Score=117.90 Aligned_cols=172 Identities=9% Similarity=-0.091 Sum_probs=99.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----c---c-CCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A---T-QKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~---~-~~~D~Vi~~a~ 151 (268)
|+++||||+ |+||++++++|+++ |++|++++|++++.+. . +.+|. + . + ..+|+|||+|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~----~---~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag 71 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIA----D---LSTAEGRKQAIADVLAKCSKGMDGLVLCAG 71 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----C---TTSHHHHHHHHHHHHTTCTTCCSEEEECCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhhcc----c---cccCCCCHHHHHHHHHHhCCCCCEEEECCC
Confidence 678999997 99999999999999 9999999998765432 1 22332 1 2 2 56799999999
Q ss_pred CCC-CCChHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCC-----------------CCCCCC
Q 024417 152 PSR-SLDYPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDE-----------------DSPVVP 200 (268)
Q Consensus 152 ~~~-~~~~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E-----------------~~~~~p 200 (268)
... .+.+.+. ..++. .++.+..++|++||...|.........+ ..+..+
T Consensus 72 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 1fjh_A 72 LGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGG 151 (257)
T ss_dssp CCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHH
T ss_pred CCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCC
Confidence 765 3332211 11111 1345678999999998873211000000 011112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH-HHHHHcCCccCC-CCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH-VYWLQKGTVDSR-PDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~-~~~l~~g~~~~~-g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + +++++||.+.++..... ..... ...... ......+++.+|+|+++
T Consensus 152 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dvA~~~ 226 (257)
T 1fjh_A 152 N--LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY-GESIAKFVPPMGRRAEPSEMASVI 226 (257)
T ss_dssp H--HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHHHHHHH
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH-HHHHHhcccccCCCCCHHHHHHHH
Confidence 2 57999999999877654 2 68999999987642211 00000 000000 11122478899999875
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.47 E-value=2.6e-13 Score=116.83 Aligned_cols=168 Identities=10% Similarity=-0.030 Sum_probs=105.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~~ 142 (268)
..++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. ..++.+.+|. + ....
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999997 99999999999999 9999999998654433211 2455666664 1 1246
Q ss_pred CCEEEEccCCCCCC---C-----hHHH-----------HHHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~-----------~~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+..... + +.+. ++.++ .++.+. ++||++||...|... .+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 151 (251)
T 1zk4_A 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-----------PS 151 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC-----------CC
Confidence 99999999854321 1 1111 11111 123455 799999998766421 12
Q ss_pred CCCCHHHHHHHHHHHHHHH---------cC--ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~---------~~--~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+. .+ ++++||+.++++...... ..... . .........+++.+|+|+++
T Consensus 152 ~--~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~dva~~~ 226 (251)
T 1zk4_A 152 L--GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-S-QRTKTPMGHIGEPNDIAYIC 226 (251)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHH-T-STTTCTTSSCBCHHHHHHHH
T ss_pred C--ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhH-H-HhhcCCCCCCcCHHHHHHHH
Confidence 2 5899999988876653 23 689999999986311100 00100 0 11111223478999999875
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.4e-12 Score=115.60 Aligned_cols=165 Identities=13% Similarity=-0.024 Sum_probs=105.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~~D~---~-----------~ 139 (268)
+..+++||||+ |+||++++++|+++ |++|++++|+.++.+.+. ...+..+.+|. + .
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 101 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 44578999997 99999999999999 999999999865543221 22455666664 1 1
Q ss_pred cCCCCEEEEccCCCCCC-----C---hHH-------HHHHHH------HH-hcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL-----D---YPG-------DVRLAA------LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~-----~---~~~-------~~~~~~------~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...+|+|||+|+..... . +.+ +..++. .. +.+..++|++||...+...
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------- 171 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---------- 171 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC----------
Confidence 34789999999854321 1 111 111111 11 3456799999998765421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-------HHHHHHcCCccCCCCcccCcccHh
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-------HVYWLQKGTVDSRPDHILNLIHYE 261 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-------~~~~l~~g~~~~~g~~~~~~Ihv~ 261 (268)
.+. ..|+.+|...|.+.+.+ + ++++|||.+++++... ....+..+.+ ...+++++
T Consensus 172 -~~~--~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~ 242 (302)
T 1w6u_A 172 -GFV--VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------CGRLGTVE 242 (302)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------TSSCBCHH
T ss_pred -CCc--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------cCCCCCHH
Confidence 122 58999999999877653 3 6899999999873210 0012222211 22478899
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+|+++
T Consensus 243 dva~~~ 248 (302)
T 1w6u_A 243 ELANLA 248 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.46 E-value=5e-13 Score=115.92 Aligned_cols=168 Identities=14% Similarity=0.022 Sum_probs=102.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------------CCceeeccCc---c----c--
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------------MGITPSLKWT---E----A-- 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------------~~i~~~~~D~---~----~-- 139 (268)
..++|||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + .
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 3468999997 99999999999999 9999999998655433211 2345555664 1 1
Q ss_pred -----cCCC-CEEEEccCCCCCC-----C---hHH-------HHHHHH------HHhcC-CCeEEEEccCeeecCCCCCC
Q 024417 140 -----TQKF-PYVIFCAPPSRSL-----D---YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGA 191 (268)
Q Consensus 140 -----~~~~-D~Vi~~a~~~~~~-----~---~~~-------~~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~ 191 (268)
.... |+|||+|+..... . +.+ +..+++ ..+.+ .++||++||...+...
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 159 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN---- 159 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC----
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC----
Confidence 2345 9999999865321 1 111 111111 12234 5799999998654321
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhh
Q 024417 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYEL 262 (268)
Q Consensus 192 ~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~D 262 (268)
.+. ..|+.+|...|.+.+.+ + ++++||+.++++........... .. ........+++.+|
T Consensus 160 -------~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~d 228 (264)
T 2pd6_A 160 -------VGQ--TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVD-KI-TEMIPMGHLGDPED 228 (264)
T ss_dssp -------TTB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-----------CT-GGGCTTCSCBCHHH
T ss_pred -------CCC--hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHH-HH-HHhCCCCCCCCHHH
Confidence 122 58999999888776543 3 68999999999854321111111 01 01111234788999
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 229 va~~~ 233 (264)
T 2pd6_A 229 VADVV 233 (264)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99875
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-13 Score=116.90 Aligned_cols=164 Identities=13% Similarity=-0.016 Sum_probs=105.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchhhh----c--CCceeeccCc---c----c-------cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI----N--MGITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~l~----~--~~i~~~~~D~---~----~-------~~ 141 (268)
.++|||||+ |+||++++++|+++ |++|++++|+ +++.+.+. . ..+..+.+|. + . ..
T Consensus 7 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 7 GKRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 9999999998 66544321 1 1345555664 1 1 23
Q ss_pred CCCEEEEccCC-CCCCC--------hHHHH-------HHHH------HHhcC--C---CeEEEEccCeeecCCCCCCCCC
Q 024417 142 KFPYVIFCAPP-SRSLD--------YPGDV-------RLAA------LSWNG--E---GSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 142 ~~D~Vi~~a~~-~~~~~--------~~~~~-------~~~~------~~~~g--v---kr~V~~SS~~vYg~~~~~~~~E 194 (268)
++|+|||+|+. ..... +.+.+ .++. ..+.+ . .++|++||...+...
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------- 157 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG------- 157 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC-------
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC-------
Confidence 89999999986 32111 11111 1111 11112 2 789999998765411
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHh
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYE 261 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~ 261 (268)
..+. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+.++. ....+++++
T Consensus 158 ---~~~~--~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 226 (258)
T 3afn_B 158 ---GPGA--GLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGI------PMGRFGTAE 226 (258)
T ss_dssp ---CTTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTC------TTCSCBCGG
T ss_pred ---CCCc--hHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccC------CCCcCCCHH
Confidence 1122 68999999999877643 3 6899999999874221 111222222 223588999
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+|+++
T Consensus 227 dva~~~ 232 (258)
T 3afn_B 227 EMAPAF 232 (258)
T ss_dssp GTHHHH
T ss_pred HHHHHH
Confidence 999875
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.46 E-value=2e-12 Score=112.86 Aligned_cols=162 Identities=10% Similarity=0.004 Sum_probs=107.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
++++||||+ |+||++++++|+++ |++|++++|+.++... ..+..+.+|. + ...++|+|||
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKPSAD---PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCCCSS---TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhhccc---CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 468999997 99999999999999 9999999998765432 2455565664 1 2348999999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+...... +.+.+ .++. ..+.+..++|++||...+... +..+. ..|+
T Consensus 103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~~~~~--~~Y~ 171 (260)
T 3un1_A 103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM---------VGMPS--ALAS 171 (260)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB---------TTCCC--HHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC---------CCCcc--HHHH
Confidence 998643221 11111 1111 134567899999997765321 11122 5899
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...|.+.+.+ + ..+++||.++++.... ....+.... ....+.+++|+|+++
T Consensus 172 ~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~------p~~r~~~~~dva~av 235 (260)
T 3un1_A 172 LTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLH------PVGRMGEIRDVVDAV 235 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGGGHHHHHTTS------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHHHHHHHhccC------CCCCCcCHHHHHHHH
Confidence 9999988776643 2 6899999999885332 122222222 223467899999875
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.5e-14 Score=119.61 Aligned_cols=154 Identities=12% Similarity=0.036 Sum_probs=104.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c----ccC---CCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E----ATQ---KFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~----~~~---~~D~Vi~~a~~ 152 (268)
|++||||+ |+||++++++|+++ +|++++|++++.+.+.. .+.+.+.+|. + .++ ++|+|||+|+.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 47999997 99999999999875 99999998665444321 1114555554 1 333 89999999986
Q ss_pred CCCC--------ChHHH-------HHHHHH--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 024417 153 SRSL--------DYPGD-------VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (268)
Q Consensus 153 ~~~~--------~~~~~-------~~~~~~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~ 215 (268)
.... ++.+. ..+++. .+.+.++||++||...|... .+. ..|+.+|...|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~--~~Y~~sK~a~~~ 143 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PGF--AAYAAAKGALEA 143 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TTB--HHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CCc--chHHHHHHHHHH
Confidence 4321 12111 112221 23456799999999887532 122 689999999998
Q ss_pred HHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 216 VILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 216 ~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++.+ + ++++||+.++++... ..+.....+++++|+|+++
T Consensus 144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~------------~~~~~~~~~~~~~dva~~~ 192 (207)
T 2yut_A 144 YLEAARKELLREGVHLVLVRLPAVATGLWA------------PLGGPPKGALSPEEAARKV 192 (207)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCBCSGGGG------------GGTSCCTTCBCHHHHHHHH
T ss_pred HHHHHHHHHhhhCCEEEEEecCcccCCCcc------------ccCCCCCCCCCHHHHHHHH
Confidence 87653 3 699999999986410 1123346799999999876
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.8e-13 Score=117.56 Aligned_cols=163 Identities=10% Similarity=-0.014 Sum_probs=105.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeeccCc---c----c-------cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~~D~---~----~-------~~ 141 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+. ...+..+.+|. + . ..
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 468999997 99999999999999 999999999865543321 12345555554 1 1 24
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
++|+|||+|+...... +.+ +..++ + ..+.+.++||++||...+... .+
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~ 153 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN-----------VG 153 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-----------TT
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-----------CC
Confidence 8999999998643211 111 11111 1 124567899999997544321 01
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + ++++||+.++++..... ...+.... ....+++.+|+|+++
T Consensus 154 ~--~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~ 225 (248)
T 2pnf_A 154 Q--VNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQI------PLGRFGSPEEVANVV 225 (248)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTC------TTSSCBCHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcC------CCCCccCHHHHHHHH
Confidence 2 57999999988776643 2 68999999998743211 11121111 123478999999875
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=9.7e-13 Score=112.91 Aligned_cols=158 Identities=12% Similarity=0.019 Sum_probs=104.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCCCcchhhh----c--CCceeeccCc---c--------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADHHDELI----N--MGITPSLKWT---E-------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~-------- 138 (268)
.++|||||+ |+||++++++|+++ |+ +|++++|++++.+.+. . ..+..+.+|. +
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHh--cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHH
Confidence 357999997 99999999999999 99 9999999865544332 1 1244555664 1
Q ss_pred ---ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 ---ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
....+|+|||+|+...... +.+ +..+++ ..+.+.+++|++||...|...
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 152 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF------- 152 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-------
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC-------
Confidence 1247999999998643211 111 111111 123467899999998876421
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhh
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSR 265 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ 265 (268)
.+. ..|+.+|...|.+.+.+ + ++++||+.++++..... . . .. ...+++.+|+|+
T Consensus 153 ----~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--------~-~-~~-~~~~~~~~dva~ 215 (244)
T 2bd0_A 153 ----RHS--SIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV--------D-D-EM-QALMMMPEDIAA 215 (244)
T ss_dssp ----TTC--HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC--------C-S-TT-GGGSBCHHHHHH
T ss_pred ----CCC--chhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc--------c-c-cc-cccCCCHHHHHH
Confidence 122 68999999998876432 2 68999999998743210 0 0 01 235788999988
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 216 ~~ 217 (244)
T 2bd0_A 216 PV 217 (244)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.43 E-value=6.1e-13 Score=113.98 Aligned_cols=163 Identities=11% Similarity=-0.053 Sum_probs=103.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhh----hcC--Ccee-eccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM--GITP-SLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l----~~~--~i~~-~~~D~---~-----------~~ 140 (268)
|++|||||+ |+||++++++|+++ |++|+++ +|++++.+.+ ... .+.. +.+|. + ..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 568999997 99999999999999 9999998 7876544332 111 2334 44553 1 13
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.++|+|||+|+...... +.+ + ++.++ .++.+.++||++||...+....
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----------- 147 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------
Confidence 58999999998643210 111 1 11121 1345678999999986443210
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+..+. ....+++++|+|++
T Consensus 148 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~ 219 (245)
T 2ph3_A 148 GQ--ANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQI------PAGRFGRPEEVAEA 219 (245)
T ss_dssp SB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTC------TTCSCBCHHHHHHH
T ss_pred CC--cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcC------CCCCCcCHHHHHHH
Confidence 12 57999999888776543 3 6899999998763110 111122211 12347899999987
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 220 ~ 220 (245)
T 2ph3_A 220 V 220 (245)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.6e-12 Score=111.26 Aligned_cols=142 Identities=11% Similarity=0.001 Sum_probs=92.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchhhhcC---CceeeccCc---c----cc-------C--
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINM---GITPSLKWT---E----AT-------Q-- 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~l~~~---~i~~~~~D~---~----~~-------~-- 141 (268)
+++|||||+ |+||++++++|+++ | ++|++++|+.++.+.+... .+..+.+|. + .+ .
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~--g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCchHHHHHHHHHHhc--CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 568999997 99999999999999 9 9999999987766555432 455566664 1 12 2
Q ss_pred CCCEEEEccCCCC-CC---C-----hHHH-------HHHHH------HHhc------C-----CCeEEEEccCeeecCCC
Q 024417 142 KFPYVIFCAPPSR-SL---D-----YPGD-------VRLAA------LSWN------G-----EGSFLFTSSSAIYDCSD 188 (268)
Q Consensus 142 ~~D~Vi~~a~~~~-~~---~-----~~~~-------~~~~~------~~~~------g-----vkr~V~~SS~~vYg~~~ 188 (268)
++|+|||+|+... .. + +.+. ..+++ ..+. + ..+||++||...+....
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 160 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence 8999999998644 11 1 1111 11111 1122 4 68999999987654321
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 189 ~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.++.+..+. ..|+.+|...|.+.+.+ + .+++||+.+..+
T Consensus 161 ----~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 208 (250)
T 1yo6_A 161 ----TSGSAQFPV--LAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN 208 (250)
T ss_dssp ----CSTTSSSCB--HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---
T ss_pred ----ccccccCCc--cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecC
Confidence 111111232 68999999998877643 2 588999999865
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=2.9e-12 Score=111.01 Aligned_cols=164 Identities=11% Similarity=0.043 Sum_probs=105.9
Q ss_pred CCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------cccCCCCEEEEcc
Q 024417 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCA 150 (268)
Q Consensus 80 ~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------~~~~~~D~Vi~~a 150 (268)
.....+++||||+ |+||++++++|+++ |++|++++|+++..+.+ ..+..+ +|. +.+.++|+|||+|
T Consensus 15 ~~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~A 89 (249)
T 1o5i_A 15 LGIRDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNA 89 (249)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECC
T ss_pred hccCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECC
Confidence 3455678999997 99999999999999 99999999986433332 123333 553 1244899999999
Q ss_pred CCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 151 PPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 151 ~~~~~~~--------~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
+...... +.+. ++.++ .++.+.+++|++||...|... .+. ..|+.+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~~s 156 (249)
T 1o5i_A 90 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENL--YTSNSA 156 (249)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTB--HHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC-----------CCC--chHHHH
Confidence 8643211 1111 11111 134567899999998876531 112 579999
Q ss_pred HHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHH-HHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVY-WLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~-~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|...|.+.+.. + ++++|||.++++.... ... .+.... ....+++.+|+|+++
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~i 222 (249)
T 1o5i_A 157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQI------PMRRMAKPEEIASVV 222 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTS------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcC------CCCCCcCHHHHHHHH
Confidence 99888766543 3 6899999999874211 111 122111 123478899999875
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=4.1e-13 Score=116.37 Aligned_cols=163 Identities=10% Similarity=-0.028 Sum_probs=102.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchhh----hcC--CceeeccCc---c----c-------cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INM--GITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~l----~~~--~i~~~~~D~---~----~-------~~ 141 (268)
.++|||||+ |+||++++++|+++ |++|++++| ++++.+.+ ... .+..+.+|. + . ..
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 999999999 54433322 211 244455564 1 1 23
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHH----H--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLA----A--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~~----~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
++|+|||+|+...... +.+. ..++ + ..+.+ ..++|++||...+.. ..
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~ 153 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------WP 153 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----------CC
Confidence 8999999998643211 1111 1111 1 12334 689999999765421 11
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH------HHHHHcCCccCCCCcccCcccHhhHh
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYELPS 264 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~------~~~l~~g~~~~~g~~~~~~Ihv~DlA 264 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.++++..... ...+.... ....+++.+|+|
T Consensus 154 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva 225 (261)
T 1gee_A 154 LF--VHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMI------PMGYIGEPEEIA 225 (261)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTC------TTSSCBCHHHHH
T ss_pred Cc--cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcC------CCCCCcCHHHHH
Confidence 22 68999998888766543 2 68999999998743211 01111111 123478899999
Q ss_pred hcc
Q 024417 265 RLQ 267 (268)
Q Consensus 265 ~ai 267 (268)
+++
T Consensus 226 ~~~ 228 (261)
T 1gee_A 226 AVA 228 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=113.22 Aligned_cols=170 Identities=10% Similarity=-0.041 Sum_probs=105.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hh---cCCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LI---NMGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~---~~~i~~~~~D~---~-----------~~~ 141 (268)
.++|||||+ |+||++++++|+++ |++|++++|+.++... +. ...+..+.+|. + ...
T Consensus 14 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 14 NKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 468999997 99999999999999 9999999997654322 11 12455565664 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+|+...... +.+. ..+++ ..+.+ .++||++||...+..... +..+..
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~~~~ 167 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLNGSL 167 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETTEEC
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----cccccc
Confidence 6999999998643221 1111 11111 11223 489999999876542211 011222
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+....+ ...+++.+|+|++
T Consensus 168 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~ 239 (265)
T 1h5q_A 168 TQ--VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIP------LNRFAQPEEMTGQ 239 (265)
T ss_dssp SC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCT------TSSCBCGGGGHHH
T ss_pred cc--cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCc------ccCCCCHHHHHHH
Confidence 33 68999999999877653 3 6899999999874321 1111221111 1236788898876
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 240 ~ 240 (265)
T 1h5q_A 240 A 240 (265)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.43 E-value=1e-12 Score=114.31 Aligned_cols=169 Identities=9% Similarity=-0.021 Sum_probs=107.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ...++|+
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 99999999999999 9999999998765443321 2345555664 1 2348999
Q ss_pred EEEccCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
|||+|+...... +.+.+ .+++ ..+.+ ..++|++||...+... .+.
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 152 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-----------ALV-- 152 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TTB--
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC-----------CCC--
Confidence 999999643211 11111 1111 11222 4699999998765321 112
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH---HHHHcC---Cc---cCCCCcccCcccHhhHhh
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV---YWLQKG---TV---DSRPDHILNLIHYELPSR 265 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~---~~l~~g---~~---~~~g~~~~~~Ihv~DlA~ 265 (268)
..|+.+|...|.+.+.+ + +.+++||.++++...... ...... +. .........+.+.+|+|+
T Consensus 153 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 232 (259)
T 4e6p_A 153 AIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG 232 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence 58999999999877654 2 589999999988532221 111111 00 112234456889999998
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 233 ~v 234 (259)
T 4e6p_A 233 MA 234 (259)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.41 E-value=4.6e-12 Score=111.52 Aligned_cols=164 Identities=9% Similarity=-0.019 Sum_probs=103.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC-CceeeccCc---c-----------ccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~-~i~~~~~D~---~-----------~~~~ 142 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+.+. .. .+..+.+|. + ....
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 3568999997 99999999999999 999999999865543321 11 344555554 1 2348
Q ss_pred CCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCC----CeEEEEccCeeecCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGE----GSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gv----kr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
+|+|||+|+..... + +.+.+ +.++ .++.+. +++|++||...|....
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~--------- 176 (276)
T 2b4q_A 106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG--------- 176 (276)
T ss_dssp CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC---------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC---------
Confidence 99999999854321 1 11111 1111 122343 7999999987654211
Q ss_pred CCCCCCC-HHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH----HHHHc--CCccCCCCcccCcccHh
Q 024417 198 VVPIGRS-PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV----YWLQK--GTVDSRPDHILNLIHYE 261 (268)
Q Consensus 198 ~~p~~~~-~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~----~~l~~--g~~~~~g~~~~~~Ihv~ 261 (268)
.. . .|+.+|...|.+.+.+ + +++++||.+..+-..... ..+.. ..+ ...+.+.+
T Consensus 177 --~~--~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~ 246 (276)
T 2b4q_A 177 --EQ--AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIP------MGRWGRPE 246 (276)
T ss_dssp --CS--CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTST------TSSCCCHH
T ss_pred --CC--ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCC------CCCcCCHH
Confidence 11 3 7999999998776643 2 589999999876432211 11111 111 12367889
Q ss_pred hHhhcc
Q 024417 262 LPSRLQ 267 (268)
Q Consensus 262 DlA~ai 267 (268)
|+|+++
T Consensus 247 dvA~~v 252 (276)
T 2b4q_A 247 EMAALA 252 (276)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.6e-12 Score=110.27 Aligned_cols=162 Identities=11% Similarity=0.037 Sum_probs=97.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhh----hc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----IN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~~ 141 (268)
.++|||||+ |+||++++++|+++ |++|+++ .|++++.+.+ .. ..+..+.+|. + ...
T Consensus 5 ~~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 5 GKTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 468999997 99999999999999 9999999 5665544332 21 2355555664 1 124
Q ss_pred CCCEEEEccCCCCC--------CChHH-------HHHHH----H--HHhcCCCeEEEEccC-eeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS--------LDYPG-------DVRLA----A--LSWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~--------~~~~~-------~~~~~----~--~~~~gvkr~V~~SS~-~vYg~~~~~~~~E~~~~~ 199 (268)
++|+|||+|+.... +++.+ +..++ + ..+.+.++||++||. +.|+..
T Consensus 83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------ 150 (247)
T 2hq1_A 83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------ 150 (247)
T ss_dssp CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------
Confidence 89999999986421 11111 11111 1 123567899999997 455421
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc----HHHHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~----~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.+.++... .....+..+. ....+++.+|+|++
T Consensus 151 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~ 222 (247)
T 2hq1_A 151 GQ--ANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNI------PLKRFGTPEEVANV 222 (247)
T ss_dssp -C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTS------TTSSCBCHHHHHHH
T ss_pred CC--cHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhC------CCCCCCCHHHHHHH
Confidence 12 58999999998877654 2 588999998765211 0111122221 22357899999987
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 223 ~ 223 (247)
T 2hq1_A 223 V 223 (247)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.41 E-value=6.4e-13 Score=114.62 Aligned_cols=166 Identities=11% Similarity=-0.038 Sum_probs=102.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-------ccCCCCEE
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-------ATQKFPYV 146 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-------~~~~~D~V 146 (268)
....++|||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..+....+|. + ...++|+|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 345678999997 99999999999999 9999999998766544322 2455555664 1 23579999
Q ss_pred EEccCCCCC--------CChHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRS--------LDYPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~--------~~~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+.... +++.+.+ .++ + ..+.+..+||++||...|... .+. ..
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~ 155 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN-----------PGQ--AN 155 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC-----------SCS--HH
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC-----------CCC--ch
Confidence 999985432 1121111 111 1 123456799999998766421 112 58
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|...|.+.+.+ + ..+++||.+.++..... ...+..+ .....+.+.+|+|+++
T Consensus 156 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~ 224 (249)
T 3f9i_A 156 YCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQK------IPLGTYGIPEDVAYAV 224 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHH------CTTCSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhc------CCCCCCcCHHHHHHHH
Confidence 999999888776543 2 58899999987642211 1111111 1223477889998875
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=1.7e-12 Score=114.51 Aligned_cols=164 Identities=10% Similarity=-0.042 Sum_probs=103.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~~ 141 (268)
..++|||||+ |+||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + ...
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3568999997 99999999999999 99999999876544332 22 2344555664 1 135
Q ss_pred CCCEEEEccCCCCCC---C-----hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
++|+|||+|+..... + +.+. ++.++ ..+.+.++||++||...+.... +
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~ 189 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------G 189 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC-----------C
Confidence 799999999864321 1 1111 11111 1245678999999986554210 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+....+ ...+++.+|+|+++
T Consensus 190 ~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~dvA~~~ 261 (285)
T 2c07_A 190 Q--ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIP------AGRMGTPEEVANLA 261 (285)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCT------TSSCBCHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCC------CCCCCCHHHHHHHH
Confidence 2 58999999888766543 3 6899999998874221 1111221111 12378999999875
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-12 Score=112.04 Aligned_cols=136 Identities=13% Similarity=0.013 Sum_probs=92.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c----c-------cCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----A-------TQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~----~-------~~~~D~ 145 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+.. .++..+.+|. + . ..++|+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 99999999999999 9999999998765443321 1455555664 1 1 238999
Q ss_pred EEEccCCCCCCC--------hHHHH-------HHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YPGDV-------RLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
|||+|+...... +.+.+ .++. ..+.+ ..++|++||...+... + +.
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~~-- 156 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA---------P--LL-- 156 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------T--TC--
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC---------C--Cc--
Confidence 999998643211 11111 1111 12334 6899999997754321 1 12
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.+ + ++++||+.++++.
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (263)
T 3ak4_A 157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence 58999999988776543 3 6899999998763
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.4e-12 Score=113.13 Aligned_cols=169 Identities=11% Similarity=-0.021 Sum_probs=105.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcC--CceeeccCc---c----c-------cCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINM--GITPSLKWT---E----A-------TQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~--~i~~~~~D~---~----~-------~~~~D 144 (268)
.+++||||+ |+||++++++|+++ |++|++++|+++. .+++... .+..+.+|. + . ..++|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999997 99999999999999 9999999998652 1222222 344555664 1 1 23899
Q ss_pred EEEEccCCCCCCC--------hHH-----------HHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPG-----------DVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-----------~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+...... +.+ .++.++ +++.+.+++|++||...|... .+.
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 148 (255)
T 2q2v_A 82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS-----------TGK-- 148 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTB--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-----------CCc--
Confidence 9999998643211 111 111121 134567899999998765421 012
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHH-HHHcC-------Ccc-CCCCcccCcccHhhHhh
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQKG-------TVD-SRPDHILNLIHYELPSR 265 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~-~l~~g-------~~~-~~g~~~~~~Ihv~DlA~ 265 (268)
..|+.+|...|.+.+.+ + ++++|||.++++....... .-..+ ..+ ........+++.+|+|+
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 228 (255)
T 2q2v_A 149 AAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGE 228 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHH
Confidence 57999999988776543 2 6899999999863221110 00000 001 11223345889999998
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 229 ~~ 230 (255)
T 2q2v_A 229 LV 230 (255)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.7e-13 Score=118.06 Aligned_cols=137 Identities=9% Similarity=-0.053 Sum_probs=95.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
+.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+....+..+.+|. + ....+|+||
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 3568999997 99999999999999 99999999987665555444555666664 1 234899999
Q ss_pred EccCCCCCCC--------hHHHH-------HH----HH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSLD--------YPGDV-------RL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-------~~----~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+|+...... +.+.+ .+ ++ .++.+..++|++||...+... ... ..|
T Consensus 93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~~--~~Y 159 (266)
T 3p19_A 93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF-----------PDH--AAY 159 (266)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTC--HHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-----------CCC--chH
Confidence 9999643211 11111 11 11 134567899999998765321 112 589
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+.+|...|.+.+.+ + +..++||.+..+.
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 99999888766543 2 5889999998763
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.39 E-value=7.4e-12 Score=108.35 Aligned_cols=132 Identities=11% Similarity=0.090 Sum_probs=88.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
.+++||||+ |.||++++++|+++ |++|++++|+++.. ..++..+.+|. + ...++|+|||
T Consensus 7 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 7 GKNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQE----QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCSS----CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhhh----cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 468999997 99999999999999 99999999986531 12355555554 1 1348999999
Q ss_pred ccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+..... + +.+.+ .++. .++.+..++|++||...+... .+. ..|+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~ 147 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-----------IGM--SAYG 147 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTC--HHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCC--chHH
Confidence 99864321 1 11111 1111 134567899999998765321 122 5899
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+|...|.+.+.+ + ++++||+.++++.
T Consensus 148 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 148 ASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 9999998877653 3 6899999999874
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=6.5e-13 Score=115.51 Aligned_cols=165 Identities=13% Similarity=0.079 Sum_probs=105.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~ 140 (268)
+..+++||||+ |+||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ..
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 33578999997 99999999999999 99999999986554332 222 344455553 1 13
Q ss_pred CCCCEEEEccCCCCC-C---C-----hHHH-------H----HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS-L---D-----YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~-------~----~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
.++|+|||+|+.... . + +.+. . +.++ .++.+.+++|++||...|...
T Consensus 90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 158 (260)
T 2zat_A 90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPF----------- 158 (260)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCC-----------
Confidence 489999999985421 1 1 1111 1 1111 134567899999998876421
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH------HHHHHcCCccCCCCcccCcccHhhH
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYELP 263 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~------~~~l~~g~~~~~g~~~~~~Ihv~Dl 263 (268)
.+. ..|+.+|...|.+.+.+ + +++++|+.+..+..... ...+..+ .....+++.+|+
T Consensus 159 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dv 230 (260)
T 2zat_A 159 PNL--GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES------LRIRRLGNPEDC 230 (260)
T ss_dssp TTB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH------HTCSSCBCGGGG
T ss_pred CCc--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc------CCCCCCCCHHHH
Confidence 122 58999999998877654 3 68999999987743211 0011111 112347888999
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 231 a~~v 234 (260)
T 2zat_A 231 AGIV 234 (260)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8865
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=113.02 Aligned_cols=137 Identities=10% Similarity=0.049 Sum_probs=93.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------C-CceeeccCc---c----ccC------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------M-GITPSLKWT---E----ATQ------ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~-~i~~~~~D~---~----~~~------ 141 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+.. . .+..+.+|. + .++
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 7 GKLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 468999997 99999999999999 9999999998655433211 1 455566664 1 111
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------H----HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~----~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
++|+|||+|+...... +.+. . +.++ ..+.+.+++|++||...|... .+
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 153 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-----------QD 153 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC-----------CC
Confidence 4999999998543211 1111 1 1111 134567899999998776421 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
. ..|+.+|...|.+.+.+ + ++++|||.++++..
T Consensus 154 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 195 (260)
T 2z1n_A 154 L--ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195 (260)
T ss_dssp B--HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCC
T ss_pred C--chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchh
Confidence 2 58999999888776543 3 68999999998753
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.39 E-value=5e-12 Score=107.91 Aligned_cols=158 Identities=15% Similarity=-0.011 Sum_probs=101.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----cc------CCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----AT------QKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~~------~~~D~Vi~~ 149 (268)
+++|||||+ |+||++++++|+++ |++|++++|+++ .+ .+..+.+|. + .+ .++|+|||+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~-~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE-GE-----DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC-SS-----SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc-cc-----ceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 468999997 99999999999999 999999999865 22 234455553 1 22 378999999
Q ss_pred cCCCCCC------------ChHHH-------HHHHH---H---HhcC------CCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 150 APPSRSL------------DYPGD-------VRLAA---L---SWNG------EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 150 a~~~~~~------------~~~~~-------~~~~~---~---~~~g------vkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
|+..... ++.+. ..+++ . .+.+ ..++|++||...|....
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------- 143 (242)
T 1uay_A 74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI---------- 143 (242)
T ss_dssp CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT----------
T ss_pred ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC----------
Confidence 9864321 11111 11111 1 1111 23999999998776321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhh
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSR 265 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ 265 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.++++.... ....+..+.+. ...+++.+|+|+
T Consensus 144 -~~--~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~dva~ 215 (242)
T 1uay_A 144 -GQ--AAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPF-----PPRLGRPEEYAA 215 (242)
T ss_dssp -TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCS-----SCSCCCHHHHHH
T ss_pred -CC--chhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCC-----cccCCCHHHHHH
Confidence 22 68999999888776543 3 6899999999863211 11122222221 034789999998
Q ss_pred cc
Q 024417 266 LQ 267 (268)
Q Consensus 266 ai 267 (268)
++
T Consensus 216 ~~ 217 (242)
T 1uay_A 216 LV 217 (242)
T ss_dssp HH
T ss_pred HH
Confidence 75
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=4.9e-12 Score=109.82 Aligned_cols=166 Identities=11% Similarity=-0.083 Sum_probs=105.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ...++|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 3568999997 99999999999999 9999999998765443322 1244455554 1 124899
Q ss_pred EEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+...... +.+.+ +.++ .++.+..++|++||...|... .+.
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 148 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL-----------ALT-- 148 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTC--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-----------CCc--
Confidence 9999998643211 11111 1121 134567899999998765421 122
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCc--cCCCCcccCcc-cHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLI-HYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~--~~~g~~~~~~I-hv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ++++|||.++++.. ..+..... .........+. +.+|+|+++
T Consensus 149 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~----~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v 220 (254)
T 1hdc_A 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT----AETGIRQGEGNYPNTPMGRVGNEPGEIAGAV 220 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH----HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc----cccchhHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 58999999988776543 2 68999999987521 11111100 11111122367 899999875
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.9e-12 Score=109.29 Aligned_cols=156 Identities=13% Similarity=-0.018 Sum_probs=96.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c-----------ccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
.++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. .++..+.+|. + ...++|+|
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 357999997 99999999999999 9999999998665544322 1455555654 1 13489999
Q ss_pred EEccCCCCCCC--------hHHH-------H----HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRSLD--------YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~~~--------~~~~-------~----~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+...... +.+. . +.++ .++.+.+++|++||...|... .+. ..
T Consensus 83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~~--~~ 149 (234)
T 2ehd_A 83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF-----------KGG--AA 149 (234)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC-----------TTC--HH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC-----------CCC--ch
Confidence 99998643211 1111 1 1111 134567899999998765421 122 58
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|...|.+.+.+ + ++++|||.+..+.... . . .. ..++..+|+|+++
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----~----~----~~-~~~~~~~dvA~~~ 207 (234)
T 2ehd_A 150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN----T----P----GQ-AWKLKPEDVAQAV 207 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc----c----c----cc-cCCCCHHHHHHHH
Confidence 999999888765433 3 6899999987642110 0 0 00 1157888888765
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.38 E-value=8.6e-12 Score=107.13 Aligned_cols=163 Identities=17% Similarity=0.137 Sum_probs=104.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--c-----------ccCCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--E-----------ATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--~-----------~~~~~D~Vi~~ 149 (268)
++++||||+ |.||++++++|+++ |++|++++|++++.. +..++..+.+|. + ...++|+|||+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~ 77 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEEAA--QSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHA 77 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHH--HHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHH--HhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEEC
Confidence 368999997 99999999999999 999999999876522 112344554543 1 23589999999
Q ss_pred cCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 150 APPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 150 a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
|+..... + +.+.+ +.++ .++.+.+++|++||...|.... ..+. ..|+.
T Consensus 78 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~~~~--~~Y~~ 146 (239)
T 2ekp_A 78 AAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG---------PVPI--PAYTT 146 (239)
T ss_dssp CCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------TSCC--HHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC---------CCCC--ccHHH
Confidence 9864321 1 11111 1111 1345678999999987765321 0122 68999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH------HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH------VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~------~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|...|.+.+.+ + ++++||+.++++..... ...+.... ....+...+|+|+++
T Consensus 147 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~~ 214 (239)
T 2ekp_A 147 AKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARI------PMGRWARPEEIARVA 214 (239)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTC------TTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcC------CCCCCcCHHHHHHHH
Confidence 999988776543 3 68999999987632111 01111111 112367889998865
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=6.5e-13 Score=115.62 Aligned_cols=136 Identities=11% Similarity=-0.011 Sum_probs=92.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT- 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~- 140 (268)
..+++||||+ |+||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ..
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 99999999986554332 222 244455664 1 12
Q ss_pred CCCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+...... +.+. ..++. .++.+.+++|++||...+... .
T Consensus 86 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 154 (260)
T 2ae2_A 86 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV-----------P 154 (260)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC-----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------C
Confidence 68999999998643211 1111 11111 134567899999998754321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. ..|+.+|...|.+.+.+ + +++++||.++++
T Consensus 155 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 195 (260)
T 2ae2_A 155 YE--AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 195 (260)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred Cc--chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCc
Confidence 12 58999999999877654 2 589999999865
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.38 E-value=2.5e-12 Score=111.99 Aligned_cols=136 Identities=16% Similarity=0.099 Sum_probs=90.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchh----hhc--CCceeeccCc---c----c-------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LIN--MGITPSLKWT---E----A------- 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~----l~~--~~i~~~~~D~---~----~------- 139 (268)
+..++|||||+ |+||++++++|+++ |++|++++| ++++.+. +.. ..+..+.+|. + .
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 44578999997 99999999999999 999999999 5443322 222 2344555664 1 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHH-------HHHHH---HHh--cCCCeEEEEccCeee-cCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGD-------VRLAA---LSW--NGEGSFLFTSSSAIY-DCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~---~~~--~gvkr~V~~SS~~vY-g~~~~~~~~E~~~~ 198 (268)
..++|+|||+|+...... +.+. ..++. ... .+ ++||++||...| ...
T Consensus 97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~----------- 164 (274)
T 1ja9_A 97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGI----------- 164 (274)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSC-----------
T ss_pred cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCC-----------
Confidence 238999999998643211 1111 11111 111 23 799999998776 321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|...|.+.+.+ + ++++||+.++++
T Consensus 165 ~~~--~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~ 206 (274)
T 1ja9_A 165 PNH--ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTD 206 (274)
T ss_dssp CSC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred CCC--chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 112 57999999999887653 3 689999999875
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=4.1e-12 Score=110.58 Aligned_cols=136 Identities=13% Similarity=0.024 Sum_probs=93.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----h---cCCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I---NMGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~---~~~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+ . ...+..+.+|. + ...
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 99999999986554332 1 12355555664 1 134
Q ss_pred CCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
++|+|||+|+..... + +.+.+ +.++ .++.+.+++|++||...|... .+
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 153 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL-----------WY 153 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-----------CC
Confidence 899999999864321 1 11111 1111 124567899999998876532 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + ++++||+.++++.
T Consensus 154 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 154 E--PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred c--chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 2 58999999988776643 3 6899999999874
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=5.1e-12 Score=109.04 Aligned_cols=137 Identities=12% Similarity=0.080 Sum_probs=94.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-CceeeccCc---c-------ccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT---E-------ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~~D~---~-------~~~~~D~Vi~~a~ 151 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+... ++..+.+|. + ...++|+|||+|+
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 6 GKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 468999997 99999999999999 99999999987655444321 455555664 1 2468999999998
Q ss_pred CCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHH
Q 024417 152 PSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (268)
Q Consensus 152 ~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK 210 (268)
...... +.+.+ .++. ..+.+..++|++||...+... + .+. ..|+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~-~~~--~~Y~~sK 151 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG---------V-VNR--CVYSTTK 151 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------C-TTB--HHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC---------C-CCC--ccHHHHH
Confidence 643211 11111 1111 123467899999998765321 0 012 5899999
Q ss_pred HHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 211 LKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 211 ~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
...|.+.+.+ + ++++||+.++++.
T Consensus 152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 9998877654 3 6899999999863
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.7e-12 Score=110.66 Aligned_cols=167 Identities=10% Similarity=-0.008 Sum_probs=103.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-C-CceeeccCc---c-----------ccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-GITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~-~i~~~~~D~---~-----------~~~~~D~V 146 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++ +.+.. . . ..+.+|. + ....+|+|
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 6 GKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999997 99999999999999 9999999998766 43221 1 2 4455553 1 23489999
Q ss_pred EEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+..... + +.+.+ .++. .++.+.+++|++||...+... .+. ..
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~ 148 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE-----------QEN--AA 148 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-----------TTB--HH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-----------CCC--hh
Confidence 9999864321 1 11111 1111 124567899999997654321 112 58
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHH-HHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-WLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~-~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|...|.+.+.+ + +.+++||.+.++....... .....+. .........+++.+|+|+++
T Consensus 149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~ 223 (256)
T 2d1y_A 149 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAV 223 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 999999998877643 2 5889999997642110000 0101111 11122334588999999875
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.6e-11 Score=105.94 Aligned_cols=162 Identities=14% Similarity=0.058 Sum_probs=103.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-----------ccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. .++..+.+|. + ....+|+||
T Consensus 5 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 5 DKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999997 99999999999999 9999999998765544332 2455666664 1 134799999
Q ss_pred EccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+|+...... +.+ +..++. .++.+..++|++||...++.. .. ..|
T Consensus 83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~--~~Y 148 (245)
T 1uls_A 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------GQ--ANY 148 (245)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------TC--HHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------Cc--hhH
Confidence 9998643211 111 111111 123467899999998743321 12 579
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|...+.+.+.. + +++++||.+..+-... ....+....+ ...+++.+|+|+++
T Consensus 149 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~~v 216 (245)
T 1uls_A 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATP------LGRAGKPLEVAYAA 216 (245)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCT------TCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCC------CCCCcCHHHHHHHH
Confidence 99998887665543 3 6899999998763211 1111211111 11267888988765
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.2e-11 Score=105.66 Aligned_cols=138 Identities=12% Similarity=0.037 Sum_probs=95.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ....+|
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARA--GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3578999997 99999999999999 9999999999877654322 2455555664 1 234899
Q ss_pred EEEEccCCCCC-C----C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-L----D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 145 ~Vi~~a~~~~~-~----~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|||+|+.... . + +.+.+ ..+. ..+.+..++|++||...+... .+.
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~ 156 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAY-----------DMS 156 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBC-----------SSC
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCC-----------CCC
Confidence 99999986521 1 1 11111 1111 134567899999998765421 122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
..|+.+|...|.+.+.+ + +.+++||.++++..
T Consensus 157 --~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 197 (271)
T 3tzq_B 157 --TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRL 197 (271)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTT
T ss_pred --hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccc
Confidence 58999999998776643 2 58999999998753
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-12 Score=111.71 Aligned_cols=135 Identities=15% Similarity=0.076 Sum_probs=89.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------c--CCceeeccCc---c----c-------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------N--MGITPSLKWT---E----A------- 139 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~--~~i~~~~~D~---~----~------- 139 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+. . ..+..+.+|. + .
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 468999997 99999999999999 999999999865543321 1 1244555664 1 1
Q ss_pred cCCCCEEEEccCCCCCC---------C---hHHHH-------HHH----H--HHhcCCCeEEEEccCee-ecCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL---------D---YPGDV-------RLA----A--LSWNGEGSFLFTSSSAI-YDCSDNGACD 193 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---------~---~~~~~-------~~~----~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~ 193 (268)
..++|+|||+|+..... . +.+.+ .++ + .++.+ +++|++||... +...
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------ 156 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------ 156 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC------
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC------
Confidence 23899999999854211 1 11111 111 1 12235 89999999865 4321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + ++++|||.++++.
T Consensus 157 -----~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 199 (278)
T 1spx_A 157 -----PDF--PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199 (278)
T ss_dssp -----TTS--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred -----CCc--cHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence 112 57999999998877643 3 6899999999874
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.9e-12 Score=113.99 Aligned_cols=137 Identities=16% Similarity=0.088 Sum_probs=92.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcC-----CceeeccCc---c-----------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM-----GITPSLKWT---E----------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~-----~i~~~~~D~---~----------- 138 (268)
..+++||||+ |+||++++++|+++ |++|++++|++++.+. +... .+..+.+|. +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3578999997 99999999999999 9999999998765433 2222 244455564 1
Q ss_pred ccCCCCEEEEccCCC-CCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPS-RSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~-~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
.....|+|||+|+.. .... +.+.+ .+++ ..+.+..+||++||...+...
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 158 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH--------- 158 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC---------
Confidence 235899999999962 2111 11111 1111 123455699999998776422
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecCC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKAD 234 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+. +.+++||.++++.
T Consensus 159 --~~~--~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 201 (281)
T 3svt_A 159 --RWF--GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201 (281)
T ss_dssp --TTC--THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred --CCC--hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 112 689999999998876542 5889999999764
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.6e-11 Score=106.09 Aligned_cols=165 Identities=12% Similarity=0.040 Sum_probs=101.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccch-hhhcC--CceeeccCc---c-----------ccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHD-ELINM--GITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~-~l~~~--~i~~~~~D~---~-----------~~~~~D 144 (268)
.+++||||+ |.||++++++|+++ |++|++++|++ ++.+ .+... .+..+.+|. + ...++|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 468999997 99999999999999 99999999987 4433 22222 345555664 1 135899
Q ss_pred EEEEccCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+...... +.+. ++.++ .++.+..++|++||...|... .+.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 151 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI-----------EAY-- 151 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-----------SSC--
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC-----------CCc--
Confidence 9999998643211 1111 11111 134567899999998766421 112
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc-HHH-H--HHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG-AHV-Y--WLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~-~~~-~--~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + +++++||.++++... ... . .... ... .....+.+.+|+|+++
T Consensus 152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~---~~~~~~~~p~dva~~~ 224 (249)
T 2ew8_A 152 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NML---QAIPRLQVPLDLTGAA 224 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT---SSSCSCCCTHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHH-Hhh---CccCCCCCHHHHHHHH
Confidence 58999999988777653 3 689999999876422 110 0 0000 010 1123478899999875
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.2e-11 Score=109.04 Aligned_cols=171 Identities=11% Similarity=-0.016 Sum_probs=103.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchh----hh---cCCceeeccCc---c-----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LI---NMGITPSLKWT---E----------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~----l~---~~~i~~~~~D~---~----------- 138 (268)
++++++||||+ |.||++++++|+++ |++|++++|+. +..+. +. ...+..+.+|. +
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 33568999997 99999999999999 99999999943 33222 21 12345555664 1
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
....+|+|||+|+...... +.+.+ ..+. ..+.+..++|++||...+...
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 170 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS---------- 170 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC----------
Confidence 2358999999999753321 11111 1111 134466799999997654321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHH-H-----HHcCC----ccCCCCcccCcc
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY-W-----LQKGT----VDSRPDHILNLI 258 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~-~-----l~~g~----~~~~g~~~~~~I 258 (268)
... ..|+.+|...|.+.+.+ + +..++||.++++....... . +...+ ....+.....++
T Consensus 171 -~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 247 (281)
T 3v2h_A 171 -PFK--SAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI 247 (281)
T ss_dssp -TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCB
T ss_pred -CCc--hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCcc
Confidence 112 58999999988776643 2 5889999999874221100 0 00000 122334456689
Q ss_pred cHhhHhhcc
Q 024417 259 HYELPSRLQ 267 (268)
Q Consensus 259 hv~DlA~ai 267 (268)
+.+|+|+++
T Consensus 248 ~~edvA~~v 256 (281)
T 3v2h_A 248 TVEQVASLA 256 (281)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 999999875
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.35 E-value=6.1e-12 Score=109.05 Aligned_cols=136 Identities=10% Similarity=0.015 Sum_probs=93.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~ 143 (268)
+..+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ....+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34578999997 99999999999999 9999999998765443321 2455555664 1 23478
Q ss_pred CEEEEccCCCCCC---C-----hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|+|||+|+..... + +.+. ++.++ .++.+ .++|++||...|... .+.
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~- 148 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI-----------EQY- 148 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-----------TTB-
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-----------CCC-
Confidence 9999999864321 1 1111 11111 12345 899999998765421 112
Q ss_pred CCHHHHHHHHHHHHHHHc---------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + ++++||+.++++
T Consensus 149 -~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~ 189 (253)
T 1hxh_A 149 -AGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCc
Confidence 58999999888776543 5 689999999976
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.2e-12 Score=110.13 Aligned_cols=162 Identities=12% Similarity=-0.019 Sum_probs=104.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c----c-------cCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----A-------TQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~----~-------~~~~D~ 145 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + . ..++|+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 99999999999999 9999999998765443221 1245555664 1 1 238999
Q ss_pred EEEccCCCCCC---C-----hHHH-------H----HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL---D-----YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~-------~----~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+..... + +.+. . +.++ .++.+.+++|++||...|... .+. .
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 151 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT-----------VAC--H 151 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTB--H
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-----------CCc--h
Confidence 99999864321 1 1111 1 1111 134567899999998765421 122 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.|+.+|...|.+.+.+ + ++++||+.++++... +...... ......+++.+|+|+++
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-----~~~~~~~--~~~~~~~~~~~dvA~~v 216 (260)
T 1nff_A 152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-----WVPEDIF--QTALGRAAEPVEVSNLV 216 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-----TSCTTCS--CCSSSSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-----cchhhHH--hCccCCCCCHHHHHHHH
Confidence 8999999998876543 3 689999999987421 0000110 11123467888888765
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=4.1e-12 Score=112.62 Aligned_cols=137 Identities=8% Similarity=0.036 Sum_probs=90.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----h-------cCCceeeccCc---c--------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I-------NMGITPSLKWT---E-------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~-------~~~i~~~~~D~---~-------- 138 (268)
+..++|||||+ |+||++++++|+++ |++|++++|+.++.+.+ . ...+..+.+|. +
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 44578999997 99999999999999 99999999986544322 1 12355555664 1
Q ss_pred ---ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 ---ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
....+|+|||+|+...... +.+ +..+++ . .+.+..++|++||...++.
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-------- 165 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF-------- 165 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC--------
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC--------
Confidence 1247999999998543211 111 111111 1 1123578999999872221
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+ .. ..|+.+|...+.+.+.+ + ++++||+.++|+.
T Consensus 166 --~--~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 166 --P--LA--VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp --T--TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred --C--cc--hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 0 12 57989998877665532 3 6899999999983
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.34 E-value=6.7e-12 Score=107.52 Aligned_cols=162 Identities=11% Similarity=-0.028 Sum_probs=101.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhh----hc--CCceeeccCc---c-----------ccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----IN--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~~~ 142 (268)
++|||||+ |+||++++++|+++ |++|+++ +|++++.+.+ .. ..+..+.+|. + ...+
T Consensus 2 k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 57999997 99999999999999 9999995 7775543322 11 1244455564 1 1247
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+|+...... +.+ +..++. ..+.+.++||++||...+... .+.
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~~ 148 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-----------IGQ 148 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-----------TTC
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC-----------CCC
Confidence 999999998654211 111 111111 123467899999998654321 012
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ++++||+.++++.... ....+.... ....+++.+|+|+++
T Consensus 149 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~ 219 (244)
T 1edo_A 149 --ANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTI------PLGRTGQPENVAGLV 219 (244)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSC------TTCSCBCHHHHHHHH
T ss_pred --ccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcC------CCCCCCCHHHHHHHH
Confidence 57999999888766543 3 6899999998763111 111122111 123478999999875
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.6e-11 Score=106.88 Aligned_cols=169 Identities=9% Similarity=-0.068 Sum_probs=102.8
Q ss_pred CCCCeEEEEcc-cH-HHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc---CCceeeccCc---c-----------
Q 024417 82 VGENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN---MGITPSLKWT---E----------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~-IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~---~~i~~~~~D~---~----------- 138 (268)
+..+++||||+ |+ ||++++++|+++ |++|++++|+.++.+.+ .. ..+..+.+|. +
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 44578999997 85 999999999999 99999999987654332 11 2455666664 1
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhc-CCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWN-GEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~-gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
.....|+|||+|+...... +.+.+ .++. ..+. +..++|++||...+...
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 168 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ--------- 168 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC---------
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC---------
Confidence 2358999999999643221 11111 1111 1222 56789999997654321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
.+. ..|+.+|...|.+.+.+ + ...++||.+..+...... .... ...........+.+.+|+|++
T Consensus 169 --~~~--~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~r~~~~~dva~~ 242 (266)
T 3o38_A 169 --HSQ--SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL--DRLASDEAFGRAAEPWEVAAT 242 (266)
T ss_dssp --TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------------------CCTTSSCCCHHHHHHH
T ss_pred --CCC--chHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHH--HHHHhcCCcCCCCCHHHHHHH
Confidence 122 68999999998877643 2 588999999876321110 0000 001122233457889999987
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 243 i 243 (266)
T 3o38_A 243 I 243 (266)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-11 Score=106.58 Aligned_cols=170 Identities=11% Similarity=0.119 Sum_probs=103.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~ 140 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + ..
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34578999997 99999999999999 999999999876544332 11 344555664 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-------HHHH-------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+|+...... +.+.+ ..+. .++.+..++|++||...+...
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 150 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG----------- 150 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC-----------
Confidence 58999999998543211 11111 1111 133456899999997755321
Q ss_pred CCCCCCHHHHHHHHHHHHHHH--------cC--ceEEEeCceecCCCcHHHHHHHcCCc--cCCCCcccCcccHhhHhhc
Q 024417 199 VPIGRSPRTDVLLKAEKVILE--------FG--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~--------~~--~tIlRp~~vyG~~~~~~~~~l~~g~~--~~~g~~~~~~Ihv~DlA~a 266 (268)
... ..|+.+|...|.+.+. .+ +..++||.++++...... +...... .........+...+|+|++
T Consensus 151 ~~~--~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~p~~r~~~pedvA~~ 227 (257)
T 3imf_A 151 PGV--IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKL-WISEEMAKRTIQSVPLGRLGTPEEIAGL 227 (257)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTSTTCSCBCHHHHHHH
T ss_pred CCc--HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhc-ccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 112 5799999887765542 23 689999999987432110 0000000 0011112346788888876
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 228 v 228 (257)
T 3imf_A 228 A 228 (257)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-11 Score=106.15 Aligned_cols=143 Identities=12% Similarity=-0.032 Sum_probs=93.4
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCC---CeEEEEeCCCCcchhhhc-----CCceeeccCc---c----cc--
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELIN-----MGITPSLKWT---E----AT-- 140 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G---~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~----~~-- 140 (268)
+..+.|++|||||+ |+||++++++|+++ | ++|++++|+.++.+.+.. ..+..+.+|. + .+
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~--G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 93 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNL--PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVAD 93 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTS--SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhc--CCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHH
Confidence 34456789999997 99999999999999 9 999999998776544322 2455666664 1 12
Q ss_pred -----C--CCCEEEEccCCCC-CCC--------hHHH-------HHHHH------HHhc------C-----CCeEEEEcc
Q 024417 141 -----Q--KFPYVIFCAPPSR-SLD--------YPGD-------VRLAA------LSWN------G-----EGSFLFTSS 180 (268)
Q Consensus 141 -----~--~~D~Vi~~a~~~~-~~~--------~~~~-------~~~~~------~~~~------g-----vkr~V~~SS 180 (268)
. .+|+|||+|+... ... +.+. ..+++ ..+. + ..+||++||
T Consensus 94 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS 173 (267)
T 1sny_A 94 IEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSS 173 (267)
T ss_dssp HHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECC
T ss_pred HHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEec
Confidence 2 7999999998654 111 1111 11111 0111 2 579999999
Q ss_pred CeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 181 SAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 181 ~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|.... +..+. ..|+.+|...|.+.+.+ + ++++|||.+..+
T Consensus 174 ~~~~~~~~--------~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 174 ILGSIQGN--------TDGGM--YAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp GGGCSTTC--------CSCCC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred ccccccCC--------CCCCc--hHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 87765321 11122 58999999998877653 2 689999999654
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.1e-11 Score=107.69 Aligned_cols=170 Identities=11% Similarity=-0.016 Sum_probs=102.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhh----c--CCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI----N--MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~----~--~~i~~~~~D~---~-----------~~ 140 (268)
+|+++||||+ |.||++++++|+++ |++|++++|+.+.. +.+. . ..+..+.+|. + ..
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF 83 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4678999997 99999999999999 99999998865432 2111 1 2355556664 1 13
Q ss_pred CCCCEEEEccCC--CCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPP--SRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 141 ~~~D~Vi~~a~~--~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
..+|+|||+|+. ..... +.+.+ ..+. .++.+..++|++||.+.++.. +
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~---------~ 154 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAP---------G 154 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCC---------C
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccC---------C
Confidence 489999999993 21111 11111 1111 134567899999988654321 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..+. ..|+.+|...|.+.+.+ + ..+++||.++++............. ........+.+.+|+|+++
T Consensus 155 ~~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~p~~r~~~~~dva~~v 229 (264)
T 3i4f_A 155 WIYR--SAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLK--EHNTPIGRSGTGEDIARTI 229 (264)
T ss_dssp CTTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC----------CCCCHHHHHHHH
T ss_pred CCCC--chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHH--hhcCCCCCCcCHHHHHHHH
Confidence 1122 68999999888776543 2 5889999999874321111111100 1111223367788888765
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-12 Score=111.35 Aligned_cols=135 Identities=13% Similarity=0.093 Sum_probs=79.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~ 140 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + ..
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34578999997 99999999999999 999999999876544332 22 244455554 1 23
Q ss_pred CCCCEEEEccCCCC---C------C-C-hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSR---S------L-D-YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~---~------~-~-~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
..+|+|||+|+... . + + +.+. ++.++ ..+.+..++|++||...|..
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------- 154 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY---------- 154 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC----------
Confidence 48999999998631 0 1 0 1111 11111 13456789999999887621
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + ..+++||.++++.
T Consensus 155 ----~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 155 ----S--NYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred ----C--chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 1 45888898888766543 2 5889999999874
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=7.9e-12 Score=107.57 Aligned_cols=164 Identities=9% Similarity=-0.047 Sum_probs=105.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~ 141 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+.+. .. .+..+.+|. + ...
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 999999999876544332 22 345555664 1 234
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+...... +.+.+ .++. ..+.+..++|++||...+.... .
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 150 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP-----------G 150 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------C
Confidence 7999999999753321 11111 1111 1234567999999987654211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + ..+++||.+..+-.... ...+..+. ....+.+.+|+|+++
T Consensus 151 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~i 222 (247)
T 3lyl_A 151 Q--TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKI------PSGQIGEPKDIAAAV 222 (247)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTS------TTCCCBCHHHHHHHH
T ss_pred c--HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcC------CCCCCcCHHHHHHHH
Confidence 2 68999999888776543 2 58899999987743211 11122221 223478899998875
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.8e-11 Score=105.97 Aligned_cols=140 Identities=14% Similarity=0.042 Sum_probs=93.6
Q ss_pred CCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeeccCc---c----------
Q 024417 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E---------- 138 (268)
Q Consensus 80 ~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~~D~---~---------- 138 (268)
..+..+++||||+ |.||++++++|+++ |++|++++|++++.+.+. ...+..+.+|. +
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVK 94 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3455678999997 99999999999999 999999999865543321 12344455564 1
Q ss_pred -ccCCCCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEccCee-ecCCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAI-YDCSDNGACDED 195 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~ 195 (268)
....+|+|||+|+...... +.+.+ ..+ + +++.+.+++|++||..+ +.
T Consensus 95 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---------- 164 (267)
T 1vl8_A 95 EKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV---------- 164 (267)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC----------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc----------
Confidence 1348999999998643221 11111 111 1 12456789999999763 11
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+..+. ..|+.+|...|.+.+.+ + +++++||.+..+.
T Consensus 165 -~~~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 209 (267)
T 1vl8_A 165 -TMPNI--SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209 (267)
T ss_dssp -CSSSC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred -CCCCC--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence 11122 58999999998877643 3 6899999998764
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=106.58 Aligned_cols=136 Identities=16% Similarity=0.059 Sum_probs=93.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhhcCCceeeccCc---c-----------ccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINMGITPSLKWT---E-----------ATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi 147 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++. +.+...++..+.+|. + ....+|+||
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 104 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEH--GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV 104 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 467999997 99999999999999 99999999987653 334444666666664 1 235899999
Q ss_pred EccCCCCCC--C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 148 FCAPPSRSL--D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 148 ~~a~~~~~~--~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
|+|+..... + +.+.+ ..+. .++.+..++|++||...+... .+. ..|+
T Consensus 105 ~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~ 171 (260)
T 3gem_A 105 HNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS-----------SKH--IAYC 171 (260)
T ss_dssp ECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-----------SSC--HHHH
T ss_pred ECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-----------CCc--HhHH
Confidence 999864321 1 11111 1111 134466899999998765321 122 5899
Q ss_pred HHHHHHHHHHHHcC--------ceEEEeCceecCC
Q 024417 208 DVLLKAEKVILEFG--------GCVLRLAGLYKAD 234 (268)
Q Consensus 208 ~sK~~aE~~l~~~~--------~tIlRp~~vyG~~ 234 (268)
.+|...|.+.+.+. ...++||.+..+.
T Consensus 172 asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~ 206 (260)
T 3gem_A 172 ATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence 99999887776542 5889999998763
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=5.1e-12 Score=111.14 Aligned_cols=135 Identities=12% Similarity=0.020 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc--CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~--~~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+. +.. ..+..+.+|. + ...+
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 9999999998655433 222 2344555664 1 2347
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-------HHHH---H-----HhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA---L-----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~~~---~-----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
+|+|||+|+...... +.+.+ .++. . .+.+..+||++||...+... .
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~ 168 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV-----------V 168 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC-----------T
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC-----------C
Confidence 999999998643211 11111 1111 0 12256799999997643211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. ..|+.+|...|.+.+.+ + ++++|||.++++
T Consensus 169 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 209 (277)
T 2rhc_B 169 HA--APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 209 (277)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSH
T ss_pred CC--ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCc
Confidence 22 58999999988776653 2 689999999876
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=4.4e-11 Score=104.34 Aligned_cols=137 Identities=12% Similarity=-0.021 Sum_probs=92.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc---CCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN---MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~---~~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ .. ..+..+.+|. + ..
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3468999997 99999999999999 99999999987654332 22 2355555664 1 23
Q ss_pred CCCCEEEEccCCCCCC---C-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+..... + +.+.+ ..+ + ..+.+..++|++||...+-. +..
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~~ 156 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----------GYP 156 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----------CCT
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----------CCC
Confidence 4899999999864321 1 11111 111 1 12346789999999763210 011
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. ..|+.+|...|.+.+.+ + +..++||.++++
T Consensus 157 ~~--~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 197 (262)
T 3pk0_A 157 GW--SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTE 197 (262)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred CC--hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCc
Confidence 22 58999999998877653 2 689999999876
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.7e-11 Score=105.08 Aligned_cols=135 Identities=10% Similarity=0.018 Sum_probs=90.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + ...+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 367999997 99999999999999 99999999986554332 111 344555664 1 1348
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+...... +.+.+ +.++ ..+.+ ..++|++||...+... ..
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 148 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-----------PE 148 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-----------CC
Confidence 999999998643211 11111 1111 12334 6799999997643211 01
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...|.+.+.+ + ++++|||.++++
T Consensus 149 ~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 188 (256)
T 1geg_A 149 L--AVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 188 (256)
T ss_dssp B--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred c--hhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccc
Confidence 2 57999999888776643 3 689999999875
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.30 E-value=4.5e-11 Score=103.87 Aligned_cols=165 Identities=12% Similarity=0.068 Sum_probs=105.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~ 140 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ..
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 44578999997 99999999999999 99999999987654432 222 344555554 1 23
Q ss_pred CCCCEEEEccCCCCCC--C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL--D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~--~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
..+|+|||+|+..... + +.+.+ ..+. .++.+..++|++||...+... .+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 156 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN-----------VR 156 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-----------TT
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-----------CC
Confidence 5899999999864321 1 11111 1111 134566799999998765321 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-----HHHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
. ..|+.+|...|.+.+.+ + ...++||.+..+.... ....+.... ....+.+.+|+|++
T Consensus 157 ~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~------p~~r~~~~~dva~~ 228 (256)
T 3gaf_A 157 M--ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHT------PLGRLGEAQDIANA 228 (256)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTC------TTSSCBCHHHHHHH
T ss_pred c--hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcC------CCCCCCCHHHHHHH
Confidence 2 68999999998877654 2 5889999998652110 111122211 22346788999886
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 229 ~ 229 (256)
T 3gaf_A 229 A 229 (256)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.30 E-value=3e-11 Score=104.14 Aligned_cols=163 Identities=8% Similarity=-0.037 Sum_probs=102.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchh----hhc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LIN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~----l~~--~~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |.||++++++|+++ |++|++++| ++++.+. +.. ..+..+.+|. + ...
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 999999999 5544332 221 2345555664 1 134
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
++|+|||+|+...... +.+. ++.++ .++.+.+++|++||...+... + .
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~ 150 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------P--G 150 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------T--T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------C--C
Confidence 8999999998643211 1111 11111 133567899999998654321 0 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + +++++||.+..+-... ....+....+ ...+++.+|+|+++
T Consensus 151 ~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~~~ 222 (246)
T 2uvd_A 151 Q--ANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIP------AAQFGEAQDIANAV 222 (246)
T ss_dssp B--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCT------TCSCBCHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 2 57999999887765432 3 6899999998763211 1111211111 12378899998875
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.29 E-value=4e-11 Score=105.11 Aligned_cols=174 Identities=13% Similarity=0.034 Sum_probs=105.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC------------cchh----hhc--CCceeeccCc---c-
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHDE----LIN--MGITPSLKWT---E- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~------------~~~~----l~~--~~i~~~~~D~---~- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.+ ..+. +.. ..+..+.+|. +
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 44578999997 99999999999999 999999998732 1111 111 2345555664 1
Q ss_pred ----------ccCCCCEEEEccCCCCCCC----hHHHH-------HHHH------HHhc-CCCeEEEEccCeeecCCCCC
Q 024417 139 ----------ATQKFPYVIFCAPPSRSLD----YPGDV-------RLAA------LSWN-GEGSFLFTSSSAIYDCSDNG 190 (268)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~----~~~~~-------~~~~------~~~~-gvkr~V~~SS~~vYg~~~~~ 190 (268)
....+|+|||+|+...... +.+.+ ..+. ..+. ...++|++||...+....
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 166 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG-- 166 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC--
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc--
Confidence 2348999999999654321 11111 1111 1222 257999999986543211
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-H-HHH----HHcCC---ccCCCC
Q 024417 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-H-VYW----LQKGT---VDSRPD 252 (268)
Q Consensus 191 ~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-~-~~~----l~~g~---~~~~g~ 252 (268)
.+..+. ..|+.+|...|.+.+.+ + +..++||.++++.... . ... ..... ......
T Consensus 167 -----~~~~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (278)
T 3sx2_A 167 -----SADPGS--VGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAM 239 (278)
T ss_dssp -----CSSHHH--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSS
T ss_pred -----cCCCCc--hHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhc
Confidence 011111 57999999988776643 2 5899999999875331 1 111 11111 112222
Q ss_pred cccCcccHhhHhhcc
Q 024417 253 HILNLIHYELPSRLQ 267 (268)
Q Consensus 253 ~~~~~Ihv~DlA~ai 267 (268)
. ..+++.+|+|+++
T Consensus 240 p-~~~~~p~dvA~~v 253 (278)
T 3sx2_A 240 P-VEVLAPEDVANAV 253 (278)
T ss_dssp S-CSSBCHHHHHHHH
T ss_pred C-cCcCCHHHHHHHH
Confidence 2 5688999999875
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.9e-11 Score=105.25 Aligned_cols=159 Identities=9% Similarity=-0.006 Sum_probs=97.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ....
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 468999997 99999999999999 99999999987654433 222 244555664 1 2357
Q ss_pred CCEEEEccCCCC-CCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSR-SLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~-~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+... ... +.+.+ ..+. ..+.+..+||++||...+... .+
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 175 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV-----------AD 175 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC-----------TT
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC-----------CC
Confidence 999999998622 111 11111 1111 134567899999998765321 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + +.+++||.+..+-... ... ......++..+|+|+++
T Consensus 176 ~--~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~------~~~~~~~~~p~dvA~~v 239 (262)
T 3rkr_A 176 G--AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG----LSA------KKSALGAIEPDDIADVV 239 (262)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHH
T ss_pred C--chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc----ccc------ccccccCCCHHHHHHHH
Confidence 2 68999999888776543 2 5889999987642111 000 11123356788888765
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.3e-11 Score=102.79 Aligned_cols=158 Identities=12% Similarity=-0.017 Sum_probs=94.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c--------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E--------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~--------~~~~~D~Vi~ 148 (268)
|+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + .....|+|||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 678999997 99999999999999 9999999998766554432 2345555564 1 1234499999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+...... +.+.+ ..+. ..+.+ .++|++||...+... .+. ..|+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~-----------~~~--~~Y~ 144 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPK-----------AQE--STYC 144 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCC-----------TTC--HHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCC-----------CCC--chhH
Confidence 998643221 11111 1111 11222 399999998765321 122 5899
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...|.+.+.+ + ...++||.+..+-... ... ......++..+|+|+++
T Consensus 145 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----~~~------~~~~~~~~~~~dvA~~i 203 (230)
T 3guy_A 145 AVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET----SGK------SLDTSSFMSAEDAALMI 203 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh----cCC------CCCcccCCCHHHHHHHH
Confidence 9999988776643 2 5788999987652111 100 11123467888888765
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-11 Score=104.59 Aligned_cols=170 Identities=9% Similarity=-0.076 Sum_probs=98.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ....+|
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 4578999997 99999999999999 9999999998766554322 2355555664 1 234899
Q ss_pred EEEEccCCCCC-C-----C---hHHHH-----------HHHH--HHhc----CCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-L-----D---YPGDV-----------RLAA--LSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 145 ~Vi~~a~~~~~-~-----~---~~~~~-----------~~~~--~~~~----gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
+|||+|+.... . + +.+.+ +.++ ..+. ...++|++||...+...
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------- 154 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR----------- 154 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC-----------
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC-----------
Confidence 99999986431 1 1 11111 1111 1111 14579999997654321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcC--CccCCCCcccCcccHhhHhhcc
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKG--TVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g--~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
... ..|+.+|...|.+.+.+ + ...++|+.+..+............ +..........+++.+|+|+++
T Consensus 155 ~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 232 (261)
T 3n74_A 155 PNL--AWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAA 232 (261)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHH
T ss_pred CCc--cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHH
Confidence 112 57999999988876643 2 588899999876422110000000 0011222334578899999875
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.1e-11 Score=106.91 Aligned_cols=163 Identities=9% Similarity=-0.034 Sum_probs=103.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchh----hhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~----l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |+||++++++|+++ |++|++++|.. ++.+. +... .+..+.+|. + ...
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467999997 99999999999999 99999988854 33222 2222 344455554 1 234
Q ss_pred CCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+..... + +.+.+ .++. ..+.+..++|++||...+.... +
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 150 (246)
T 3osu_A 82 SLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP-----------G 150 (246)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----------C
Confidence 899999999864321 1 11111 1111 1345678999999976554211 2
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + ..+++||.++++.... ....+..+.+ ...+.+.+|+|+++
T Consensus 151 ~--~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p------~~r~~~~~dva~~v 222 (246)
T 3osu_A 151 Q--ANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIP------LARFGQDTDIANTV 222 (246)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCT------TCSCBCHHHHHHHH
T ss_pred C--hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 2 58999999888776643 2 5899999999874321 1112222222 23366788888765
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=2.9e-11 Score=105.53 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=92.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh--------cCCceeeccCc---c-----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI--------NMGITPSLKWT---E----------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~--------~~~i~~~~~D~---~----------- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|++++.+.+. ...+..+.+|. +
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 999999999865543321 12345555664 1
Q ss_pred ccCCCCEEEEccCCCCC-CC--------hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRS-LD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~-~~--------~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
....+|+|||+|+.... .. +.+. ++.++ .++.+..++|++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 159 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI--------- 159 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---------
Confidence 13479999999986432 11 1111 11111 134567899999998754321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|...|.+.+.+ + +++++||.++++
T Consensus 160 --~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 201 (267)
T 1iy8_A 160 --GNQ--SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 201 (267)
T ss_dssp --SSB--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred --CCC--ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCc
Confidence 112 58999999888776543 3 689999999875
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=3.7e-11 Score=104.40 Aligned_cols=136 Identities=10% Similarity=-0.006 Sum_probs=91.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhh-------cCCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI-------NMGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~-------~~~i~~~~~D~---~-----------~~ 140 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++ .+.+. ...+..+.+|. + ..
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 468999997 99999999999999 9999999998765 43321 12345555664 1 13
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+...... +.+.+ +.++ .++.+..++|++||...+... .
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 150 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS-----------A 150 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC-----------C
Confidence 48999999998643211 11111 1111 123467899999998765421 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+. ..|+.+|...|.+.+.+ + +++++||.+.++.
T Consensus 151 ~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 151 NK--SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred CC--chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence 22 58999999988776543 2 6899999998874
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.28 E-value=9e-12 Score=109.15 Aligned_cols=162 Identities=10% Similarity=-0.045 Sum_probs=101.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.+..... ....+|. + ....+|+|||
T Consensus 28 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 28 GKVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999997 99999999999999 99999999987654322 1112332 1 2358999999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+...... +.+.+ ..+. .++.+..++|++||...|... .+. ..|+
T Consensus 101 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~ 167 (266)
T 3uxy_A 101 NAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----------PGH--ALYC 167 (266)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----------TTB--HHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----------CCC--hHHH
Confidence 999754211 11111 1111 134567899999998765321 122 5899
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCC-------ccCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGT-------VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~-------~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...|.+.+.+ + ..+++||.++++...... -..+. ..........+.+.+|+|+++
T Consensus 168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 241 (266)
T 3uxy_A 168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGF--AKRGFDPDRAVAELGRTVPLGRIAEPEDIADVV 241 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHH--HHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhh--hcccccchHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 9999998777643 2 589999999875211100 00000 011122234577899999875
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.9e-11 Score=107.01 Aligned_cols=138 Identities=14% Similarity=0.036 Sum_probs=93.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~ 140 (268)
+..++|||||+ |+||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + ..
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 34578999997 99999999999999 99999999986554332 21 2355566664 1 13
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.++|+|||+|+...... +.+ + ++.++ ..+.+.++||++||...|... .
T Consensus 107 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 175 (272)
T 1yb1_A 107 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV-----------P 175 (272)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH-----------H
T ss_pred CCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC-----------C
Confidence 48999999998654321 111 1 11111 134567899999998776421 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHc----------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF----------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~----------~--~tIlRp~~vyG~~ 234 (268)
+. ..|+.+|...|.+.+.+ + ++++||+.+.++.
T Consensus 176 ~~--~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~ 220 (272)
T 1yb1_A 176 FL--LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF 220 (272)
T ss_dssp HH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCc
Confidence 12 57999999888766532 3 6899999998763
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.28 E-value=8.5e-11 Score=101.94 Aligned_cols=167 Identities=14% Similarity=0.059 Sum_probs=98.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.... ..+..+.+|. + ....+|+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 7 SRVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 99999999999999 9999999998766544322 2345555564 1 2348999
Q ss_pred EEEccCCCCCC------------ChHHHH-------HHHH------HHh------cCCCeEEEEccCeeecCCCCCCCCC
Q 024417 146 VIFCAPPSRSL------------DYPGDV-------RLAA------LSW------NGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 146 Vi~~a~~~~~~------------~~~~~~-------~~~~------~~~------~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
+||+|+..... ++.+.+ ..+. ..+ .+..++|++||...+....
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------ 158 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------ 158 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT------
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC------
Confidence 99999865321 011111 1111 111 1456899999987664321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcc-cCcccHhhHh
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHI-LNLIHYELPS 264 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~-~~~Ihv~DlA 264 (268)
+. ..|+.+|...|.+.+.+ + +.+++||.+.++........... ........ ..+.+.+|+|
T Consensus 159 -----~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~~~r~~~~~dva 229 (257)
T 3tpc_A 159 -----GQ--AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQD--ALAASVPFPPRLGRAEEYA 229 (257)
T ss_dssp -----TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHH
T ss_pred -----CC--cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHH--HHHhcCCCCCCCCCHHHHH
Confidence 12 58999999888776543 2 68999999998743211110100 01111111 3478899998
Q ss_pred hcc
Q 024417 265 RLQ 267 (268)
Q Consensus 265 ~ai 267 (268)
+++
T Consensus 230 ~~v 232 (257)
T 3tpc_A 230 ALV 232 (257)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=5.4e-11 Score=104.05 Aligned_cols=163 Identities=8% Similarity=-0.130 Sum_probs=100.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchhhh-------cCCceeeccCc-------c---------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELI-------NMGITPSLKWT-------E--------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~l~-------~~~i~~~~~D~-------~--------- 138 (268)
.+++||||+ |+||++++++|+++ |++|++++| ++++.+.+. ...+..+.+|. +
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 468999997 99999999999999 999999999 655443321 12344444443 2
Q ss_pred --ccCCCCEEEEccCCCCCC---Ch-H-----------HHHHH-----------HH---HHh--cCC------CeEEEEc
Q 024417 139 --ATQKFPYVIFCAPPSRSL---DY-P-----------GDVRL-----------AA---LSW--NGE------GSFLFTS 179 (268)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~---~~-~-----------~~~~~-----------~~---~~~--~gv------kr~V~~S 179 (268)
....+|+|||+|+..... +. . +.... +. ... .+. .++|++|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is 168 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 168 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence 123799999999853221 00 1 11111 11 111 344 7999999
Q ss_pred cCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH---HHHHHHcCCc
Q 024417 180 SSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA---HVYWLQKGTV 247 (268)
Q Consensus 180 S~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~---~~~~l~~g~~ 247 (268)
|...|... .+. ..|+.+|...|.+.+.+ + +++++||.++++ ... ....+....+
T Consensus 169 S~~~~~~~-----------~~~--~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~~p 234 (276)
T 1mxh_A 169 DAMTDLPL-----------PGF--CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRKVP 234 (276)
T ss_dssp CGGGGSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTTCT
T ss_pred chhhcCCC-----------CCC--eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhcCC
Confidence 98765421 122 58999999988776543 3 689999999998 321 1111222111
Q ss_pred cCCCCcccCcccHhhHhhcc
Q 024417 248 DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 248 ~~~g~~~~~~Ihv~DlA~ai 267 (268)
. .+.+.+.+|+|+++
T Consensus 235 ~-----~r~~~~~~dva~~v 249 (276)
T 1mxh_A 235 L-----GQSEASAAQIADAI 249 (276)
T ss_dssp T-----TSCCBCHHHHHHHH
T ss_pred C-----CCCCCCHHHHHHHH
Confidence 1 11278899999875
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-10 Score=102.72 Aligned_cols=139 Identities=13% Similarity=0.022 Sum_probs=92.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + ....
T Consensus 32 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 32 GKRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999997 99999999999999 999999999877654432 22 345555664 1 2348
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+...... +.+.+ ..+ + ..+.+ ..++|++||...+... +..+
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~---------~~~~ 180 (276)
T 3r1i_A 110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIIN---------IPQQ 180 (276)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---------CSSC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccC---------CCCC
Confidence 999999999654321 11111 011 1 12233 3789999997654321 0112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
. ..|+.+|...|.+.+.+ + +..++||.+..+-.
T Consensus 181 ~--~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~ 222 (276)
T 3r1i_A 181 V--SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELV 222 (276)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTT
T ss_pred c--chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 2 67999999988876643 2 58899999987743
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.4e-11 Score=104.31 Aligned_cols=168 Identities=14% Similarity=0.051 Sum_probs=102.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC----CceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~----~i~~~~~D~---~-----------~ 139 (268)
..+++||||+ |+||++++++|+++ |++|++++|++++.+.+. .. .+..+.+|. + .
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 3568999997 99999999999999 999999999865544322 11 244455564 1 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHH-------H----HHHHH--HHhcCC--CeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGE--GSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~-------~----~~~~~--~~~~gv--kr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
..++|+|||+|+...... +.+ + ++.++ .++.+. +++|++||...|...
T Consensus 109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~--------- 179 (279)
T 1xg5_A 109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--------- 179 (279)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------
Confidence 248999999998543211 111 1 12222 134454 799999998765421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHH---------cC--ceEEEeCceecCCCcHHHHHHHcCCc--cCCCCcccCcccHhhH
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYKADRGAHVYWLQKGTV--DSRPDHILNLIHYELP 263 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~---------~~--~tIlRp~~vyG~~~~~~~~~l~~g~~--~~~g~~~~~~Ihv~Dl 263 (268)
+..+. ..|+.+|...|.+.+. .+ +++++|+.+.++... ....... .........+++.+|+
T Consensus 180 ~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~----~~~~~~~~~~~~~~~~~~~~~~~dv 253 (279)
T 1xg5_A 180 PLSVT--HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF----KLHDKDPEKAAATYEQMKCLKPEDV 253 (279)
T ss_dssp SCGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH----HHTTTCHHHHHHHHC---CBCHHHH
T ss_pred CCCCC--chhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh----hhcccChhHHhhhcccccCCCHHHH
Confidence 11122 5799999988765542 23 688999999865210 0100000 0000012246889999
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 254 A~~i 257 (279)
T 1xg5_A 254 AEAV 257 (279)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=8.8e-11 Score=103.16 Aligned_cols=138 Identities=12% Similarity=-0.031 Sum_probs=91.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc------------chh----hhcC--CceeeccCc---c--
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH------------HDE----LINM--GITPSLKWT---E-- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~------------~~~----l~~~--~i~~~~~D~---~-- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|++.. ... +... .+..+.+|. +
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 3578999997 99999999999999 9999999997321 111 1122 344455554 1
Q ss_pred ---------ccCCCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCC
Q 024417 139 ---------ATQKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSD 188 (268)
Q Consensus 139 ---------~~~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~ 188 (268)
....+|++||+|+..... + +.+.+ .++. ..+.+..++|++||...+...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 165 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN- 165 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC-
Confidence 235899999999864321 1 11111 1111 123456799999998765321
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 189 ~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
.+. ..|+.+|...|.+.+.+ + ...++||.++++..
T Consensus 166 ----------~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~ 209 (281)
T 3s55_A 166 ----------FAQ--ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMT 209 (281)
T ss_dssp ----------TTC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTT
T ss_pred ----------CCC--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccc
Confidence 122 58999999988776543 2 58999999998853
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=4.3e-11 Score=104.90 Aligned_cols=137 Identities=15% Similarity=0.092 Sum_probs=92.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--CCceeeccCc---c-----------cc-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--MGITPSLKWT---E-----------AT- 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--~~i~~~~~D~---~-----------~~- 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+.+ .. ..+..+.+|. + ..
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3478999997 99999999999999 99999999986554332 21 2345555664 1 12
Q ss_pred CCCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+..... + +.+.+ .++. .++.+..++|++||...|... .
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~ 166 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL-----------P 166 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC-----------T
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC-----------C
Confidence 6899999999864321 1 11111 1111 123467899999998876531 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+. ..|+.+|...|.+.+.+ + +++++||.++++.
T Consensus 167 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 167 SV--SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred Cc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 12 58999999988776543 3 6899999999874
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=7.6e-12 Score=109.02 Aligned_cols=135 Identities=11% Similarity=0.018 Sum_probs=90.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |.||++++++|+++ |++|+++ .|+.++.+.+ ... .+..+.+|. + ...
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999997 99999999999999 9999987 7765543332 222 345555664 1 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
..|+|||+|+...... +.+.+ ..+ + .++.+..++|++||...+... .+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~ 150 (258)
T 3oid_A 82 RLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL-----------EN 150 (258)
T ss_dssp CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC-----------TT
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC-----------CC
Confidence 8899999998543211 11111 111 1 134556799999997755321 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
. ..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 151 ~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 190 (258)
T 3oid_A 151 Y--TTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTD 190 (258)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSG
T ss_pred c--HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCh
Confidence 2 68999999998877643 2 588999999876
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=5.4e-11 Score=103.04 Aligned_cols=165 Identities=13% Similarity=-0.008 Sum_probs=103.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c----c-------cCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----A-------TQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~----~-------~~~~D 144 (268)
..++|||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + . ..++|
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 88 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 88 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 3578999997 99999999999999 9999999998776554322 2455555664 1 1 23899
Q ss_pred EEEEccCCCCCC-----------C---hHHH-------HHHHH------HHhc------CCCeEEEEccCeeecCCCCCC
Q 024417 145 YVIFCAPPSRSL-----------D---YPGD-------VRLAA------LSWN------GEGSFLFTSSSAIYDCSDNGA 191 (268)
Q Consensus 145 ~Vi~~a~~~~~~-----------~---~~~~-------~~~~~------~~~~------gvkr~V~~SS~~vYg~~~~~~ 191 (268)
+|||+|+..... . +.+. ..+++ ..+. +..++|++||...+...
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---- 164 (265)
T 2o23_A 89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---- 164 (265)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----
T ss_pred EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCC----
Confidence 999999864221 1 1111 11111 1122 56789999998776532
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHH----HHHcCCccCCCCcccCcc
Q 024417 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVY----WLQKGTVDSRPDHILNLI 258 (268)
Q Consensus 192 ~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~----~l~~g~~~~~g~~~~~~I 258 (268)
.+. ..|+.+|...|.+.+.+ + +++++||.+.++....... .+....+ . ...++
T Consensus 165 -------~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~---~~~~~ 230 (265)
T 2o23_A 165 -------VGQ--AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVP--F---PSRLG 230 (265)
T ss_dssp -------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCS--S---SCSCB
T ss_pred -------CCC--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCC--C---cCCCC
Confidence 122 58999999888776543 3 6899999998764221110 0111111 1 02367
Q ss_pred cHhhHhhcc
Q 024417 259 HYELPSRLQ 267 (268)
Q Consensus 259 hv~DlA~ai 267 (268)
+.+|+|+++
T Consensus 231 ~~~dva~~~ 239 (265)
T 2o23_A 231 DPAEYAHLV 239 (265)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 899998875
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.26 E-value=1.9e-11 Score=108.15 Aligned_cols=147 Identities=11% Similarity=-0.034 Sum_probs=95.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-------ccCCCCEEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-------ATQKFPYVIF 148 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-------~~~~~D~Vi~ 148 (268)
..+++||||+ |+||++++++|+++ |++|++++|+.++.+.+.. ..++.+.+|. + .+..+|+|||
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3578999997 99999999999999 9999999998766544322 1355556664 1 2347899999
Q ss_pred ccCCCCC------CChHH-------HHHHHH--HHhcCCCeEEEEccCeeecCCC-C-CCCCCCCCCCCCCCCHHHHHHH
Q 024417 149 CAPPSRS------LDYPG-------DVRLAA--LSWNGEGSFLFTSSSAIYDCSD-N-GACDEDSPVVPIGRSPRTDVLL 211 (268)
Q Consensus 149 ~a~~~~~------~~~~~-------~~~~~~--~~~~gvkr~V~~SS~~vYg~~~-~-~~~~E~~~~~p~~~~~y~~sK~ 211 (268)
+|+.... +++.+ +...++ ......+++|++||...|.... . ....|..+..+. ..|+.+|.
T Consensus 93 nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~ 170 (291)
T 3rd5_A 93 NAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPW--LAYSQSKL 170 (291)
T ss_dssp CCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHH--HHHHHHHH
T ss_pred CCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCc--chHHHHHH
Confidence 9986431 11211 111222 1223346999999988774321 1 112222222232 57999999
Q ss_pred HHHHHHHHc-------C----ceEEEeCceecC
Q 024417 212 KAEKVILEF-------G----GCVLRLAGLYKA 233 (268)
Q Consensus 212 ~aE~~l~~~-------~----~tIlRp~~vyG~ 233 (268)
..|.+.+.+ + ...++||.+..+
T Consensus 171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~ 203 (291)
T 3rd5_A 171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTN 203 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSC
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccc
Confidence 988766543 2 467899998765
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.26 E-value=4.5e-11 Score=104.71 Aligned_cols=164 Identities=9% Similarity=-0.049 Sum_probs=101.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+++.. ..+..+.+|. + ....+|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999997 99999999999999 9999999998766544321 2355555654 1 235899
Q ss_pred EEEEccCCCCCC---C-----hHHH-----------HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~-----------~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+..... + +.+. ++.++ ..+.+..++|++||...+... .+.
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~-- 170 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGN-----------PGQ-- 170 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------CH--
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCC-----------CCc--
Confidence 999999965321 1 1111 11111 133566899999997654321 012
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc----HHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~----~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + +.+++||.+..+... .....+.... ....+.+.+|+|+++
T Consensus 171 ~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~------p~~r~~~~edvA~~v 241 (266)
T 3grp_A 171 TNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMI------PMKRMGIGEEIAFAT 241 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTC------TTCSCBCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcC------CCCCCcCHHHHHHHH
Confidence 57999999888766543 2 588999999865211 1111122222 223467788988765
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.2e-10 Score=102.38 Aligned_cols=170 Identities=13% Similarity=0.036 Sum_probs=104.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-------------Ccchh----hhcC--CceeeccCc---c-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------------DHHDE----LINM--GITPSLKWT---E- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-------------~~~~~----l~~~--~i~~~~~D~---~- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|+. ++.+. +... .+..+.+|. +
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 3568999997 99999999999999 99999999842 22221 1122 244445554 1
Q ss_pred ----------ccCCCCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcC-CCeEEEEccCeeecC
Q 024417 139 ----------ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNG-EGSFLFTSSSAIYDC 186 (268)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~g-vkr~V~~SS~~vYg~ 186 (268)
....+|+|||+|+...... +.+.+ .++ + ..+.+ ..++|++||...+..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 2358999999999654211 11111 111 1 12233 578999999776532
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH--HHHHHcCC-----ccCC
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKGT-----VDSR 250 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~--~~~l~~g~-----~~~~ 250 (268)
. ... ..|+.+|...|.+.+.+ + ...++||.++++..... ...+.... ....
T Consensus 172 ~-----------~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (280)
T 3pgx_A 172 T-----------PGN--GHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM 238 (280)
T ss_dssp C-----------TTB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCB
T ss_pred C-----------CCc--hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhc
Confidence 1 112 58999999888776543 2 58899999998854321 11121111 0011
Q ss_pred CCcccCcccHhhHhhcc
Q 024417 251 PDHILNLIHYELPSRLQ 267 (268)
Q Consensus 251 g~~~~~~Ihv~DlA~ai 267 (268)
......+.+.+|+|+++
T Consensus 239 ~~~~~r~~~p~dvA~~v 255 (280)
T 3pgx_A 239 PVQPNGFMTADEVADVV 255 (280)
T ss_dssp TTBCSSCBCHHHHHHHH
T ss_pred ccCCCCCCCHHHHHHHH
Confidence 12222488999999875
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.26 E-value=1.5e-11 Score=108.19 Aligned_cols=138 Identities=13% Similarity=0.159 Sum_probs=91.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---hhhcCC--ceeeccCc---c----------ccCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINMG--ITPSLKWT---E----------ATQK 142 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~l~~~~--i~~~~~D~---~----------~~~~ 142 (268)
+..+++||||+ |.||++++++|+++ |++|++++|.+...+ ++...+ +..+.+|. + ....
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 33578999997 99999999999999 999999997643211 222222 44455554 1 1258
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+|+...... +.+.+ ..+. ..+.+..++|++||...+... .+.
T Consensus 107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~ 175 (273)
T 3uf0_A 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG-----------RNV 175 (273)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------SSC
T ss_pred CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-----------CCC
Confidence 999999998654321 11111 1111 134567899999998765321 112
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.+ + +..++||.++.+.
T Consensus 176 --~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 176 --AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred --hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 58999999988776643 2 5889999999864
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.26 E-value=8.3e-11 Score=102.74 Aligned_cols=130 Identities=11% Similarity=0.045 Sum_probs=90.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~Vi~ 148 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++ ...+..+.+|. + ...++|+|||
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999997 99999999999999 9999999998654 12344555553 1 1347999999
Q ss_pred ccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+..... + +.+.+ +.++ ..+.+..++|++||...|... .+. ..|+
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~ 147 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT-----------KNA--SAYV 147 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-----------TTB--HHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-----------CCc--hhHH
Confidence 99864321 1 11111 1111 123467899999998765421 122 5899
Q ss_pred HHHHHHHHHHHHcC--------ceEEEeCceecC
Q 024417 208 DVLLKAEKVILEFG--------GCVLRLAGLYKA 233 (268)
Q Consensus 208 ~sK~~aE~~l~~~~--------~tIlRp~~vyG~ 233 (268)
.+|...|.+.+.+. +++++||.+.++
T Consensus 148 ~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~ 181 (264)
T 2dtx_A 148 TSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTP 181 (264)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSH
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCc
Confidence 99999988776542 578999999764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.26 E-value=5.6e-11 Score=104.67 Aligned_cols=135 Identities=13% Similarity=0.057 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
++++||||+ |.||++++++|+++ |++|++++|+.++.+. +... .+..+.+|. + ....
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467999997 99999999999999 9999999998765433 2222 345555664 1 2358
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-------HHHH--------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA--------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~~~--------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
+|+|||+|+...... +.+.+ ..+. ..+.+..++|++||...+... .
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~ 170 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGV-----------M 170 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCC-----------T
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCC-----------C
Confidence 999999999654221 11111 1111 122456799999998754321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 171 ~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 211 (279)
T 3sju_A 171 YA--APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETP 211 (279)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSH
T ss_pred CC--hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccch
Confidence 12 58999999888776543 2 588999999765
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3.7e-11 Score=105.14 Aligned_cols=168 Identities=12% Similarity=-0.032 Sum_probs=102.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chh----hhcC--CceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~----l~~~--~i~~~~~D~---~-----------~~ 140 (268)
..++|||||+ |.||++++++|+++ |++|++++|+.+. .+. +... .+..+.+|. + ..
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3578999997 99999999999999 9999999995433 222 2222 345555664 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.++|+|||+|+...... +.+.+ +.++ .++.+..++|++||...+... .
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 174 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGN-----------M 174 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------T
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCC-----------C
Confidence 48999999999654321 11111 1111 133466899999997655321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+. ..|+.+|...|.+.+.+ + ...++||.+..+-.......... ..........+.+.+|+|+++
T Consensus 175 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~~~~~p~dvA~~i 247 (271)
T 4iin_A 175 GQ--TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKA--DYVKNIPLNRLGSAKEVAEAV 247 (271)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHH
T ss_pred Cc--hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHH--HHHhcCCcCCCcCHHHHHHHH
Confidence 22 68999999988877643 2 58899999987632211111110 011112233477889998875
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-12 Score=118.36 Aligned_cols=143 Identities=11% Similarity=0.059 Sum_probs=89.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCCC--cch----hhhcCCceee--c---cC-ccccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTAD--HHD----ELINMGITPS--L---KW-TEATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~~~--~~~----~l~~~~i~~~--~---~D-~~~~~~~D 144 (268)
|||+|||+ ||||++++..|+++ |+ +|+++++.+. +.. .+....+... . .+ .++++++|
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCC
Confidence 58999996 99999999999998 86 8999998641 111 1221111111 1 12 24688999
Q ss_pred EEEEccCCCCC-CC--------hHHHHHHHH--HHhcC-CC-eEEEEccCe-eecCCCCCCCCCCC-CCCCCCCCHHHHH
Q 024417 145 YVIFCAPPSRS-LD--------YPGDVRLAA--LSWNG-EG-SFLFTSSSA-IYDCSDNGACDEDS-PVVPIGRSPRTDV 209 (268)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~~~~~~~--~~~~g-vk-r~V~~SS~~-vYg~~~~~~~~E~~-~~~p~~~~~y~~s 209 (268)
+|||+|+.... .. ....+++++ .++.+ ++ ++|+.|+.. +... ...|.. +..|. +.|+.+
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~----~~~~~~~~~~p~--~~yg~t 156 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL----IAYKNAPGLNPR--NFTAMT 156 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH----HHHHTCTTSCGG--GEEECC
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH----HHHHHcCCCChh--heeccc
Confidence 99999996542 11 123344444 23444 54 777777643 1110 011222 23344 568889
Q ss_pred HHHHHHHHHHc----C--ceEEEeCceecCCC
Q 024417 210 LLKAEKVILEF----G--GCVLRLAGLYKADR 235 (268)
Q Consensus 210 K~~aE~~l~~~----~--~tIlRp~~vyG~~~ 235 (268)
|+.+|++...+ + .+++|+.++||+..
T Consensus 157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred hHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 99999877544 3 69999999999864
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-11 Score=107.75 Aligned_cols=169 Identities=12% Similarity=-0.027 Sum_probs=101.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ....
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 468999997 99999999999999 99999999987654432 222 345555664 1 1348
Q ss_pred CCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+...... +.+. ..++. ..+.+ ..++|++||...+... ..
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~ 177 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN-----------AG 177 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-----------TT
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC-----------CC
Confidence 999999999653211 1111 11111 12233 5799999997755321 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHH--HHcC---Cc---cCCCCcccCcccHhhH
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYW--LQKG---TV---DSRPDHILNLIHYELP 263 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~--l~~g---~~---~~~g~~~~~~Ihv~Dl 263 (268)
. ..|+.+|...|.+.+.+ + +++++||.+..+-....... ...+ .+ .........+++.+|+
T Consensus 178 ~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv 255 (301)
T 3tjr_A 178 L--GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDV 255 (301)
T ss_dssp B--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHH
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHH
Confidence 2 58999999888766543 2 58899999976521110000 0000 00 1122234568899999
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 256 A~~i 259 (301)
T 3tjr_A 256 ARLT 259 (301)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.25 E-value=9.1e-11 Score=104.30 Aligned_cols=138 Identities=12% Similarity=0.024 Sum_probs=93.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c---CCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~---~~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. . ..+..+.+|. + ..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 3468999997 99999999999999 999999999877654432 2 2345555664 1 24
Q ss_pred CCCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+..... + +.+.+ ..+. .++.+..++|++||...+.. +..
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~----------~~~ 187 (293)
T 3rih_A 118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVT----------GYP 187 (293)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTB----------BCT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccC----------CCC
Confidence 5899999999864321 1 11111 1111 13456789999999764210 001
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+. ..|+.+|...|.+.+.+ + +.+++||.++++.
T Consensus 188 ~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 188 GW--SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CC--HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 12 68999999988877643 2 5899999999863
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.25 E-value=4.6e-11 Score=103.68 Aligned_cols=166 Identities=13% Similarity=0.145 Sum_probs=94.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc---c----cc------CCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT---E----AT------QKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~---~----~~------~~~ 143 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + .+ ..+
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 568999997 99999999999999 999999999877655432 22 244555664 1 11 478
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|++||+|+...... +.+.+ +.++ .++.+..++|++||...+... ...
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~- 152 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-----------SGF- 152 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC-----------TTC-
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC-----------CCC-
Confidence 99999999654321 11111 1111 133456799999997654321 112
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--c-eEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--G-CVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~-tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + . .++.||.+..+-......... .......... ++..+|+|+++
T Consensus 153 -~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~-~~~pedvA~~~ 223 (252)
T 3h7a_A 153 -AAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF--GKDALANPDL-LMPPAAVAGAY 223 (252)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHH
T ss_pred -ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh--hhhhhcCCcc-CCCHHHHHHHH
Confidence 58999999888776543 2 3 578998887552211100000 0011111222 78899998875
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.25 E-value=8.4e-11 Score=102.75 Aligned_cols=136 Identities=12% Similarity=0.051 Sum_probs=91.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----h---cCCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I---NMGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~---~~~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ . ...+..+.+|. + ..
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3578999997 99999999999999 99999999986654332 1 12355555664 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+|+...... +.+.+ ..+ + ..+.+ ..++|++||...|...
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 165 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL----------- 165 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----------
Confidence 58999999998654221 11111 011 1 12223 4699999998765321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 166 ~~~--~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 207 (266)
T 4egf_A 166 PDH--YAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTE 207 (266)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSH
T ss_pred CCC--hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCc
Confidence 112 58999999888776543 2 588999999865
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=6.6e-11 Score=103.11 Aligned_cols=135 Identities=13% Similarity=-0.025 Sum_probs=91.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc----CCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~----~~i~~~~~D~---~-----------~~ 140 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++.+. +.. ..+..+.+|. + ..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 368999997 99999999999999 9999999998654332 211 1344555664 1 13
Q ss_pred CCCCEEEEccCCCCCCChHHHH-----------HHHH--HHhcC---CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLDYPGDV-----------RLAA--LSWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~~~~~-----------~~~~--~~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
..+|+|||+|+....+++.+.+ +.++ .++.+ ..++|++||...|... .+. .
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~ 151 (267)
T 2gdz_A 85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-----------AQQ--P 151 (267)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTC--H
T ss_pred CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------CCC--c
Confidence 4789999999976444432221 2222 12222 5799999998766421 112 5
Q ss_pred HHHHHHHHHHHHHHH---------cC--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILE---------FG--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~---------~~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+.+. .+ +++++||.+.++
T Consensus 152 ~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~ 191 (267)
T 2gdz_A 152 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTA 191 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcch
Confidence 799999988876653 23 689999999765
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=2.3e-11 Score=106.81 Aligned_cols=149 Identities=13% Similarity=0.004 Sum_probs=92.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC------------cchh----hhc--CCceeeccCc---c--
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHDE----LIN--MGITPSLKWT---E-- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~------------~~~~----l~~--~~i~~~~~D~---~-- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.+ +.+. +.. ..+..+.+|. +
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 3578999997 99999999999999 999999998722 1111 111 2344555564 1
Q ss_pred ---------ccCCCCEEEEccCCCCCC-----C-hHHHH-------HHHHH----HhcCCCeEEEEccCeeecCCCCCCC
Q 024417 139 ---------ATQKFPYVIFCAPPSRSL-----D-YPGDV-------RLAAL----SWNGEGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 139 ---------~~~~~D~Vi~~a~~~~~~-----~-~~~~~-------~~~~~----~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (268)
....+|+|||+|+..... + +.+.+ .++.. ...+..++|++||...+......+.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 166 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG 166 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence 234899999999864321 1 21111 11111 1123468999999876643222223
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCC
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADR 235 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~ 235 (268)
.|..+..+. ..|+.+|...|.+.+.+ + ...++||.++.+..
T Consensus 167 ~~~~~~~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~ 216 (287)
T 3pxx_A 167 AGGPQGPGG--AGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDML 216 (287)
T ss_dssp ----CHHHH--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTT
T ss_pred ccccCCCcc--chHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccc
Confidence 333322222 57999999988776643 2 58899999998743
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=4.7e-11 Score=104.95 Aligned_cols=136 Identities=13% Similarity=0.080 Sum_probs=91.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC-----CceeeccCc---c-----------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----GITPSLKWT---E----------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~-----~i~~~~~D~---~----------- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. +
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 3568999997 99999999999999 99999999987654432 111 345555664 1
Q ss_pred ccCCCCEEEEccCCCCCC-------C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSL-------D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~-------~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~ 193 (268)
....+|+|||+|+..... + +.+.+ .++. ..+.+ .++|++||...+....
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~----- 156 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQ----- 156 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCC-----
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCC-----
Confidence 134799999999854211 1 11111 1111 12234 8999999987654210
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|...|.+.+.+ + +++++||.++++
T Consensus 157 -----~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 198 (280)
T 1xkq_A 157 -----PDF--LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETG 198 (280)
T ss_dssp -----CSS--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSS
T ss_pred -----Ccc--cHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCC
Confidence 112 58999999988776543 3 689999999987
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.8e-11 Score=104.07 Aligned_cols=136 Identities=14% Similarity=0.041 Sum_probs=90.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---cCCceeeccCcc-----------ccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMGITPSLKWTE-----------ATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~~~i~~~~~D~~-----------~~~~~D~Vi~ 148 (268)
|+++||||+ |.||++++++|+++ |++|++++|++++.+.+. ..+.+....|.+ ....+|+|||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEE
Confidence 678999997 99999999999999 999999999876654332 112222111331 2358999999
Q ss_pred ccCCC-CCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 149 CAPPS-RSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 149 ~a~~~-~~~~--------~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
+|+.. .... +.+.+ ..+ + .++.+..++|++||...+... .+. ..|
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 145 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW-----------KEL--STY 145 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----------TTC--HHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----------CCc--hHH
Confidence 99865 2211 11111 111 1 124467899999997654321 112 589
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+.+|...|.+.+.+ + +++++||.++|+.
T Consensus 146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~ 182 (254)
T 1zmt_A 146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 182 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 99999988776543 2 6899999998765
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-11 Score=108.88 Aligned_cols=137 Identities=14% Similarity=0.064 Sum_probs=92.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ...
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 3578999997 99999999999999 99999999987654432 222 345555664 1 234
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+...... +.+.+ ..+ + ..+.+..++|++||...+... .+
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~ 171 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR-----------AT 171 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TT
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-----------CC
Confidence 8999999999653221 11111 111 1 123456799999997643211 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + +..++||.+..+.
T Consensus 172 ~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 172 V--APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred c--hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 2 68999999988776653 2 5889999998763
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=5.3e-11 Score=104.33 Aligned_cols=164 Identities=9% Similarity=-0.036 Sum_probs=103.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchh----hhcC--CceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~----l~~~--~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|.. +..+. +... .+..+.+|. + ..
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3467999997 99999999999999 99999999843 32222 2222 344555664 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..+|+|||+|+...... +.+.+ ..+. ..+.+..++|++||...+....
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 173 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP----------- 173 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------
Confidence 48999999998754321 11111 1111 1335678999999976553210
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.. ..|+.+|...|.+.+.+ + +.+++||.++.+...... ..+....+ ...+.+.+|+|+++
T Consensus 174 ~~--~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~p------~~r~~~~~dvA~~v 243 (269)
T 4dmm_A 174 GQ--ANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIP------LGRYGEAAEVAGVV 243 (269)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHHHHHGGGCT------TSSCBCHHHHHHHH
T ss_pred Cc--hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccHHHHHhcCC------CCCCCCHHHHHHHH
Confidence 12 58999999888766543 2 689999999987543322 12222111 22367788888765
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.24 E-value=7.5e-11 Score=101.87 Aligned_cols=163 Identities=10% Similarity=-0.019 Sum_probs=99.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc-----------ccCCCCEEEEc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFC 149 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~-----------~~~~~D~Vi~~ 149 (268)
+..+++||||+ |.||++++++|+++ |++|++++|++++.+.+. ++.....|.+ ....+|+|||+
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGLF--GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTSE--EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHhc--CeeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34578999997 99999999999999 999999999876654432 2222222221 23578999999
Q ss_pred cCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 150 APPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 150 a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
|+..... + +.+.+ .++. .++.+..++|++||...+... .+. ..|+.
T Consensus 89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~~ 155 (247)
T 1uzm_A 89 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----------GNQ--ANYAA 155 (247)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CC--HHHHH
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC-----------CCC--hhHHH
Confidence 9864321 1 11111 1111 134567899999998654211 012 57999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|...|.+.+.+ + +++++||.+..+.... ....+.... ....+++.+|+|+++
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------p~~~~~~~~dvA~~~ 221 (247)
T 1uzm_A 156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFI------PAKRVGTPAEVAGVV 221 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGC------TTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcC------CCCCCcCHHHHHHHH
Confidence 999888776543 3 6899999997642110 000111111 112378899998875
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.9e-11 Score=104.84 Aligned_cols=165 Identities=10% Similarity=0.008 Sum_probs=97.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ....+|+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 467899997 99999999999999 9999999998766544322 2455555664 1 2348999
Q ss_pred EEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhcC--CCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 146 Vi~~a~~~~~-~---~-----~~~~~-----------~~~~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|||+|+.... . + +.+.+ +.++ ..+.+ ..++|++||...+... .+.
T Consensus 106 lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~-----------~~~ 174 (272)
T 4dyv_A 106 LFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR-----------PYS 174 (272)
T ss_dssp EEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC-----------TTC
T ss_pred EEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC-----------CCc
Confidence 9999996432 1 1 11111 1111 12233 4699999997654321 122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ...++||.+..+-... +..+.. .........+++.+|+|+++
T Consensus 175 --~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~~~~~pedvA~~v 244 (272)
T 4dyv_A 175 --APYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK----MKAGVPQADLSIKVEPVMDVAHVASAV 244 (272)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------------CHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh----hcccchhhhhcccccCCCCHHHHHHHH
Confidence 58999999988876643 2 5788999988653211 111111 00111223478899999875
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.6e-10 Score=101.92 Aligned_cols=164 Identities=15% Similarity=0.071 Sum_probs=104.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. . ..+..+.+|. + ....
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 468999997 99999999999999 999999999876544332 1 1344455554 1 2358
Q ss_pred CCEEEEccCCCCC-C---C-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS-L---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+.... . + +.+.+ ..+ + ..+.+..++|++||...|... ..+
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~ 155 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG----------FAG 155 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC----------CTT
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC----------CCC
Confidence 9999999985421 1 1 11111 111 1 134456799999998765211 112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH--------HHHHHHcCCccCCCCcccCcccHhhH
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA--------HVYWLQKGTVDSRPDHILNLIHYELP 263 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~--------~~~~l~~g~~~~~g~~~~~~Ihv~Dl 263 (268)
. ..|+.+|...|.+.+.+ + +..++||.+..+.... ....+.... ....+...+|+
T Consensus 156 ~--~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------p~~r~~~pedv 227 (280)
T 3tox_A 156 V--APYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLH------ALKRIARPEEI 227 (280)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTS------TTSSCBCHHHH
T ss_pred c--hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccC------ccCCCcCHHHH
Confidence 2 58999999988776643 2 6889999999874321 111122211 12346788898
Q ss_pred hhcc
Q 024417 264 SRLQ 267 (268)
Q Consensus 264 A~ai 267 (268)
|+++
T Consensus 228 A~~v 231 (280)
T 3tox_A 228 AEAA 231 (280)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.23 E-value=7.2e-11 Score=103.33 Aligned_cols=165 Identities=12% Similarity=-0.032 Sum_probs=104.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh------cCCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI------NMGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~------~~~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |+||++++++|+++ |++|++++|+.++.+.+. ...+..+.+|. + ....
T Consensus 34 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 34 GKVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp TCEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 468999997 99999999999999 999999999876644332 12355555664 1 1246
Q ss_pred CCEEEEccCCCCC------CC----hHH-------H----HHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS------LD----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 143 ~D~Vi~~a~~~~~------~~----~~~-------~----~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
+|+|||+|+.... +. +.+ + ++.++ .++.+.++||++||...+... +..
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~ 182 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IPQ 182 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------C
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CCC
Confidence 9999999985322 11 111 1 11222 134578999999997654320 011
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC--------ceEEEeCceecCCCc----HHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~~--------~tIlRp~~vyG~~~~----~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+. ..|+.+|...|.+.+.+. .++++|+.+..+-.. .....+....+ ...+++.+|+|+++
T Consensus 183 ~~--~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~~~dvA~~~ 254 (279)
T 3ctm_A 183 LQ--APYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFASKDMKAKWWQLTP------LGREGLTQELVGGY 254 (279)
T ss_dssp CH--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSCCHHHHHHHHHHST------TCSCBCGGGTHHHH
T ss_pred Cc--ccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCccccccccChHHHHHHHHhCC------ccCCcCHHHHHHHH
Confidence 22 589999999998876542 588999999876321 11111111111 12367888888765
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.9e-11 Score=102.44 Aligned_cols=134 Identities=14% Similarity=0.022 Sum_probs=88.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
++++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. .++..+.+|. + ....+|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 578999997 99999999999999 9999999998765544321 2455566664 1 2358999
Q ss_pred EEEccCCCCCC---C-----hHHHHH-------HH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL---D-----YPGDVR-------LA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~~~-------~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+..... + +.+.+. .+ + .++.+ .++|++||...+... ... .
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~-----------~~~--~ 146 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGK-----------ANE--S 146 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSC-----------SSH--H
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCC-----------CCC--c
Confidence 99999964321 1 111111 11 1 11223 399999997654321 011 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 147 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 184 (235)
T 3l6e_A 147 LYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSE 184 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCc
Confidence 7999999988776643 2 588899988655
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-10 Score=99.97 Aligned_cols=136 Identities=13% Similarity=-0.002 Sum_probs=90.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c-----------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~-----------~~ 140 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. . ..+..+.+|. + ..
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL 82 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 33578999997 99999999999999 999999999866544322 1 2345555664 1 13
Q ss_pred CCCCEEEEccCCCCCC---C-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.++|+|||+|+..... + +.+.+ .++ + ..+.+ .++|++||...+... .
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~ 150 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-----------R 150 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-----------T
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-----------C
Confidence 5899999999864321 1 11111 111 1 12345 899999997654321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...+.+.+.. + +++++||.+..+
T Consensus 151 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 191 (247)
T 2jah_A 151 NA--AVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTE 191 (247)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSS
T ss_pred CC--cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCc
Confidence 12 58999998887665543 3 689999999876
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.23 E-value=8e-11 Score=103.31 Aligned_cols=164 Identities=9% Similarity=-0.016 Sum_probs=103.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ...
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 3568999997 99999999999999 99999999986654432 222 344455554 1 235
Q ss_pred CCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.+|+|||+|+..... + +.+.+ .++. ..+.+..++|++||...+.... +
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 173 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP-----------G 173 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------C
Confidence 899999999864321 1 11111 1111 1234567999999977654211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + ..+++||.+..+-... ....+.... ....+.+.+|+|+++
T Consensus 174 ~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------p~~r~~~pedvA~~v 245 (270)
T 3ftp_A 174 Q--VNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQI------PLGRLGSPEDIAHAV 245 (270)
T ss_dssp B--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTC------TTCSCBCHHHHHHHH
T ss_pred c--hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcC------CCCCCCCHHHHHHHH
Confidence 2 58999999888766543 2 5889999998652110 111122211 223467889998875
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.5e-11 Score=103.46 Aligned_cols=170 Identities=12% Similarity=-0.029 Sum_probs=101.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchh----hhc--CCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LIN--MGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~----l~~--~~i~~~~~D~---~-----------~ 139 (268)
+.++++||||+ |.||++++++|+++ |++|+++++.. +.... +.. ..+..+.+|. + .
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 34567899997 99999999999999 99999998543 22221 111 2355566664 1 2
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...+|+|||+|+...... +.+.+ .++. ..+.+..++|++||...+....
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 170 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF---------- 170 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT----------
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC----------
Confidence 348999999998643211 11111 1111 1234567999999976554211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+. ..|+.+|...|.+.+.+ + ...++||.+..+.............. ........+...+|+|+++
T Consensus 171 -~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~~~~~p~dvA~~v 244 (269)
T 3gk3_A 171 -GQ--ANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKI-LPQIPVGRLGRPDEVAALI 244 (269)
T ss_dssp -TB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCS-GGGCTTSSCBCHHHHHHHH
T ss_pred -Cc--chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHh-hhcCCcCCccCHHHHHHHH
Confidence 12 58999999888776543 2 58899999987643211111111011 1112223466889998865
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-10 Score=101.26 Aligned_cols=168 Identities=10% Similarity=-0.003 Sum_probs=103.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hh----hhcC--CceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DE----LINM--GITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~----l~~~--~i~~~~~D~---~-----------~ 139 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.+.. +. +... .+..+.+|. + .
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 44578999997 99999999999999 99999999986532 11 1222 344555564 1 2
Q ss_pred cCCCCEEEEccCCCCC-C-----C---hHHHH-------HHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS-L-----D---YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~-----~---~~~~~-------~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...+|+|||+|+.... . . +.+.+ .++. .. .....++|++||...|....
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 191 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE----------- 191 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------
Confidence 3589999999986432 1 0 11111 1111 11 12345899999988765321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH--HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH--VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~--~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.. ..|+.+|...|.+.+.+ + +..++||.++++..... ...... .........+.+.+|+|+++
T Consensus 192 ~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---~~~~~p~~r~~~p~dvA~~v 265 (291)
T 3ijr_A 192 TL--IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---FGSNVPMQRPGQPYELAPAY 265 (291)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---TTTTSTTSSCBCGGGTHHHH
T ss_pred CC--hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH---HHccCCCCCCcCHHHHHHHH
Confidence 12 57999999998776643 2 58899999997631100 001110 11222334467888888765
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.22 E-value=9.1e-11 Score=100.96 Aligned_cols=161 Identities=11% Similarity=0.074 Sum_probs=89.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc-------------cccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-------------EATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~-------------~~~~~~D~Vi~ 148 (268)
.+++||||+ |+||++++++|.+ |+.|++++|++++.+.+.. .++..+.+|. +....+|+|||
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999997 9999999999964 7899999998766554433 2455555553 12347999999
Q ss_pred ccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 149 CAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 149 ~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
+|+...... +.+.+ +.++ .++.+ .++|++||...|... ... ..|+
T Consensus 82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~~~--~~Y~ 147 (245)
T 3e9n_A 82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPH-----------PGN--TIYA 147 (245)
T ss_dssp CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC---------------------C--HHHH
T ss_pred CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCC-----------CCc--hHHH
Confidence 998643221 11111 1111 12223 799999998776532 112 5899
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|...|.+.+.+ + ..+++||.+.++...... ... ........+++.+|+|+++
T Consensus 148 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~--~~~~~~~~~~~p~dvA~~i 210 (245)
T 3e9n_A 148 ASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM----DSQ--GTNFRPEIYIEPKEIANAI 210 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhh----hhh--hcccccccCCCHHHHHHHH
Confidence 9999998877653 2 588999999876321111 000 0111223478899999875
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.8e-11 Score=104.81 Aligned_cols=146 Identities=8% Similarity=-0.109 Sum_probs=91.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHh-cCCCCeEEEEeCCCCcchh----hhc--CCceeeccCc---c----c-------cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDE----LIN--MGITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~-~~~G~~V~~~~R~~~~~~~----l~~--~~i~~~~~D~---~----~-------~~ 141 (268)
+++|||||+ |+||++++++|++ + |++|++++|+.++.+. +.. ..+..+.+|. + . ..
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 578999997 9999999999999 8 9999999998654332 221 2355566664 1 1 23
Q ss_pred CCCEEEEccCCCCCC----ChHHHHH-----------HHHH--Hhc--CCCeEEEEccCeeecC-CC----------CCC
Q 024417 142 KFPYVIFCAPPSRSL----DYPGDVR-----------LAAL--SWN--GEGSFLFTSSSAIYDC-SD----------NGA 191 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~~~~~~~-----------~~~~--~~~--gvkr~V~~SS~~vYg~-~~----------~~~ 191 (268)
++|+|||+|+..... ...+... +++. ... ...+||++||...|.. .. ...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET 161 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence 899999999864321 1111111 1111 111 1249999999876632 00 011
Q ss_pred CCCCC-------------------CCCCCCCCHHHHHHHHHHHHHHH-----------cC--ceEEEeCceecC
Q 024417 192 CDEDS-------------------PVVPIGRSPRTDVLLKAEKVILE-----------FG--GCVLRLAGLYKA 233 (268)
Q Consensus 192 ~~E~~-------------------~~~p~~~~~y~~sK~~aE~~l~~-----------~~--~tIlRp~~vyG~ 233 (268)
++|++ +..|. ..|+.+|...|.+.+. .+ .++++||.+..+
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~ 233 (276)
T 1wma_A 162 ITEEELVGLMNKFVEDTKKGVHQKEGWPS--SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTD 233 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCS--CHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCST
T ss_pred cchhhhhhhhhhhhhhhcccccccCCCcc--chhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccC
Confidence 22221 11233 6899999888876643 24 678899999876
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.22 E-value=6.4e-11 Score=103.28 Aligned_cols=136 Identities=11% Similarity=0.040 Sum_probs=91.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 99999999987654432 222 345555664 1 235
Q ss_pred CCCEEEEccCCCC-CCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSR-SLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~-~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+|+... ... +.+.+ ..+. ..+.+ .++|++||...+... .
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-----------~ 155 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQ-----------A 155 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCC-----------T
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCC-----------C
Confidence 8999999997532 111 11111 1111 12223 799999998755321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...|.+.+.+ + +..++||.++++.
T Consensus 156 ~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 156 KY--GAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred cc--HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence 12 58999999888776543 2 5889999998763
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.21 E-value=9.2e-11 Score=103.28 Aligned_cols=137 Identities=12% Similarity=0.073 Sum_probs=93.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~ 143 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++...+.. ..+..+.+|. + ....+
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 34578999997 99999999999999 9999999998765544322 2344555554 1 23489
Q ss_pred CEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|+|||+|+..... + +.+.+ +.++ .++.+..++|++||...|... .+.
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~- 170 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAI-----------ADR- 170 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCC-----------TTB-
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCC-----------CCC-
Confidence 9999999964321 1 11111 1111 123456799999998765321 122
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 171 -~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 209 (277)
T 4dqx_A 171 -TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSP 209 (277)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 58999999988776643 2 588999999765
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.8e-11 Score=103.32 Aligned_cols=158 Identities=13% Similarity=0.121 Sum_probs=97.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc-----------ccCCCCEEEEc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFC 149 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~-----------~~~~~D~Vi~~ 149 (268)
.++++|||||+ |.||++++++|+++ |++|++++|++++... ..+.....|.+ ....+|+|||+
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~---~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENPNAD---HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTTSS---EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc---cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34578999997 99999999999999 9999999998765432 12222233321 24578999999
Q ss_pred cCCCCC-----CChHHHHH-----------HHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 150 APPSRS-----LDYPGDVR-----------LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 150 a~~~~~-----~~~~~~~~-----------~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
|+.... +...+... ++. .. .....++|++||...+... .+. ..|+.+
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y~~s 161 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT-----------SGM--IAYGAT 161 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTB--HHHHHH
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC-----------CCC--chhHHH
Confidence 985321 11111111 111 11 1112589999998765321 122 589999
Q ss_pred HHHHHHHHHHc---------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 210 LLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 210 K~~aE~~l~~~---------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|...|.+.+.+ + ..+++||.+..+. ...... ......++..+|+|+++
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~----~~~~~~------~~~~~~~~~~~dva~~i 220 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT----NRKYMS------DANFDDWTPLSEVAEKL 220 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH----HHHHCT------TSCGGGSBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc----hhhhcc------cccccccCCHHHHHHHH
Confidence 99999877642 2 5788999987541 111111 12334567888888875
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=8.2e-11 Score=101.68 Aligned_cols=136 Identities=10% Similarity=0.004 Sum_probs=90.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEEeCCCCc--chhhhc----CCceeeccCc----c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADH--HDELIN----MGITPSLKWT----E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~~R~~~~--~~~l~~----~~i~~~~~D~----~-----------~ 139 (268)
..+++||||+ |+||++++++|+++ |++ |++++|+.+. .+++.. ..+..+.+|. + .
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 3578999997 99999999999999 997 9999998642 223322 1344444543 1 1
Q ss_pred cCCCCEEEEccCCCCCCChHHHH-------HHHH---H---HhcC---CCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLDYPGDV-------RLAA---L---SWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~~~~~-------~~~~---~---~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
..++|+|||+|+....+++.+.+ .++. . .+.+ ..++|++||...|... ...
T Consensus 82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 148 (254)
T 1sby_A 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----------HQV-- 148 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------TTS--
T ss_pred cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----------CCc--
Confidence 24899999999975444332211 1111 1 1221 4689999998776421 112
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + +++++||.+.++
T Consensus 149 ~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~ 187 (254)
T 1sby_A 149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCc
Confidence 58999999998776643 3 689999999875
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=103.90 Aligned_cols=135 Identities=14% Similarity=0.078 Sum_probs=90.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC-----CceeeccCc---c-----------c
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----GITPSLKWT---E-----------A 139 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~-----~i~~~~~D~---~-----------~ 139 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+ ... .+..+.+|. + .
T Consensus 26 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 26 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 467999997 99999999999999 99999999987654332 111 345555664 1 1
Q ss_pred cCCCCEEEEccCCCCCCC----------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD----------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~----------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...+|+|||+|+...... +.+.+ +.++ ..+.+ .++|++||...+....
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~-------- 174 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH-------- 174 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC--------
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCC--------
Confidence 348999999998542211 11111 1111 12345 8999999987654210
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|...|.+.+.+ + ++++|||.++++
T Consensus 175 --~~~--~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~ 216 (297)
T 1xhl_A 175 --SGY--PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 216 (297)
T ss_dssp --TTS--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred --CCc--chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCc
Confidence 112 58999999988776543 3 689999999876
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.21 E-value=5.6e-11 Score=102.83 Aligned_cols=164 Identities=9% Similarity=-0.057 Sum_probs=104.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. .....+.+|. + ....+|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 3468999997 99999999999999 9999999998765443321 2334455553 1 235899
Q ss_pred EEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
++||+|+...... +.+.+ ..+ + ..+.+..++|++||...+... .+.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~-- 152 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGN-----------AGQ-- 152 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-----------TTC--
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCC-----------CCC--
Confidence 9999999654321 11111 111 1 123466799999997654321 122
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ...++||.+..+-... .......+. ....+.+.+|+|+++
T Consensus 153 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------p~~r~~~p~dva~~v 223 (248)
T 3op4_A 153 ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQV------PAGRLGDPREIASAV 223 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTC------TTCSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcC------CCCCCcCHHHHHHHH
Confidence 68999999888766543 2 5889999998763221 111111111 122367888988765
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.21 E-value=6.6e-11 Score=103.50 Aligned_cols=169 Identities=11% Similarity=-0.030 Sum_probs=97.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
+++|||||+ |.||++++++|+++ |++|+++ .|+.+..+.+ ... .+..+.+|. + ...
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 467999997 99999999999999 9999887 5554433322 222 344555564 1 235
Q ss_pred CCCEEEEccCCCCC-C-----C---hHHHH-------HHHH---H---Hh---cCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS-L-----D---YPGDV-------RLAA---L---SW---NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-~-----~---~~~~~-------~~~~---~---~~---~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
.+|+|||+|+.... . . +.+.+ ..+. . .+ .+..+||++||...+....
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 175 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA-------- 175 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT--------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC--------
Confidence 89999999986432 1 1 11111 1111 0 11 1356899999987654211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
... ..|+.+|...|.+.+.+ + ..+++||.++++........ ..............+.+.+|+|+++
T Consensus 176 --~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~edvA~~i 250 (272)
T 4e3z_A 176 --TQY--VDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLP-DRAREMAPSVPMQRAGMPEEVADAI 250 (272)
T ss_dssp --TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHH
T ss_pred --CCc--chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCCh-HHHHHHhhcCCcCCCcCHHHHHHHH
Confidence 011 47999999998776543 3 58999999998742210000 0000011122233466789999875
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=1.7e-10 Score=101.44 Aligned_cols=137 Identities=9% Similarity=0.019 Sum_probs=92.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----h---cCCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I---NMGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~---~~~i~~~~~D~---~-----------~ 139 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.... . ...+..+.+|. + .
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE 102 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 44578999997 99999999999999 99999999986553322 1 12345555664 1 2
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHHH-------HHHH---H---HhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...+|+|||+|+...... +.+.+ .++. . .+.+..++|++||...+....
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 172 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA---------- 172 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT----------
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC----------
Confidence 358999999998543211 11111 1111 0 223457999999987654211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+ + ...++||.++++
T Consensus 173 -~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 213 (277)
T 4fc7_A 173 -LQ--VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGT 213 (277)
T ss_dssp -TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSS
T ss_pred -Cc--HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecc
Confidence 12 58999999888776643 2 588999999876
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.9e-11 Score=104.22 Aligned_cols=163 Identities=13% Similarity=0.031 Sum_probs=101.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|++++.+++.+ ..+..+.+|. + ....+|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 3468999997 99999999999999 9999999998765544322 2345555664 1 234789
Q ss_pred EEEEccCCCCCCC--------hHHH-------HHHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 145 YVIFCAPPSRSLD--------YPGD-------VRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~-------~~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
+|||+|+...... +.+. ..++. .. .....++|++||...|+.. .. ..
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~~--~~ 148 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------------GL--AH 148 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH------------HH--HH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC------------Cc--HH
Confidence 9999998543211 1111 11111 11 1124699999998776210 11 57
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|...|.+.+.. + ++++|||.++++.... ....+....+ ...+.+.+|+|+++
T Consensus 149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p------~~~~~~p~dvA~~v 217 (263)
T 2a4k_A 149 YAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASP------LGRAGRPEEVAQAA 217 (263)
T ss_dssp HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTST------TCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCC------CCCCcCHHHHHHHH
Confidence 888888777665432 2 6899999998763211 1111222111 12367888888765
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.20 E-value=2e-10 Score=100.66 Aligned_cols=134 Identities=8% Similarity=0.032 Sum_probs=91.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCE
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
....++|||||+ |.||++++++|+++ |++|++++|+.+.... ....+.+|. + ....+|+
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSDVN----VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--CTT----SSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhccC----ceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 345688999997 99999999999999 9999999998765422 233444553 1 2358999
Q ss_pred EEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+...... +.+.+ +.++ ..+.+..++|++||...|.... .. .
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~--~ 151 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-----------NA--A 151 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT-----------TC--H
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-----------CC--h
Confidence 999998643221 11111 1111 1234678999999988765321 12 5
Q ss_pred HHHHHHHHHHHHHHHc------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+.+.+ + +..++||.++++
T Consensus 152 ~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~ 188 (269)
T 3vtz_A 152 AYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTP 188 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCc
Confidence 8999999998877643 2 588999999875
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.7e-10 Score=97.13 Aligned_cols=159 Identities=13% Similarity=0.036 Sum_probs=98.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeeccCc---c----c-------cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSLKWT---E----A-------TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~~D~---~----~-------~~ 141 (268)
|+++||||+ |.||++++++|+++ |++|++++|+.++.+.+. ...+..+.+|. + . ..
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 678999997 99999999999999 999999999876544321 12344555664 1 1 24
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHHH---HH--hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.+|+|||+|+...... +.+.+ .++. .. +.+..++|++||...+... |.
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~~ 147 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI------------PY 147 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC------------TT
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC------------CC
Confidence 8999999998643211 11111 1111 01 1234577777765433211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-----C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 202 GRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-----~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
...|+.+|...|.+.+.+ + ...++||.+..+-.. .. ........++..+|+|+++
T Consensus 148 -~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~---------~~-~~~~~~~~~~~p~dva~~v 209 (235)
T 3l77_A 148 -GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGG---------SK-PGKPKEKGYLKPDEIAEAV 209 (235)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTT---------CC-SCCCGGGTCBCHHHHHHHH
T ss_pred -cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccccc---------cc-CCcccccCCCCHHHHHHHH
Confidence 157999999999877654 2 688999998754211 00 0111222467778887764
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.5e-10 Score=100.55 Aligned_cols=160 Identities=10% Similarity=-0.048 Sum_probs=100.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------ccCCCCEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
++++++||||+ |.||++++++|+++ |++|++++|++++.+. +..+.+|. + ....+|+|
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~-----~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l 91 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGEPPEG-----FLAVKCDITDTEQVEQAYKEIEETHGPVEVL 91 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTT-----SEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHhhcc-----ceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34578999997 99999999999999 9999999998765432 44454553 1 23578999
Q ss_pred EEccCCCCC--------CChHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRS--------LDYPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~--------~~~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+.... +++.+.+ .++. ..+.+..++|++||...+... ... ..
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~~ 158 (253)
T 2nm0_A 92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----------AGQ--AN 158 (253)
T ss_dssp EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH-----------HHH--HH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CCc--HH
Confidence 999986421 1222111 1111 123467899999997654311 011 57
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
|+.+|...|.+.+.+ + +++++||.+..+..... ...+.... ....++..+|+|+++
T Consensus 159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------p~~~~~~p~dvA~~i 227 (253)
T 2nm0_A 159 YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQV------PLGRYARPEEIAATV 227 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTC------TTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcC------CCCCCcCHHHHHHHH
Confidence 999999888776643 2 68999999876532111 00111111 112478899998865
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=102.64 Aligned_cols=138 Identities=14% Similarity=0.052 Sum_probs=91.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ....
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 28 SPVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 467999997 99999999999999 99999999987654432 222 344455554 1 2358
Q ss_pred CCEEEEccCCCCC----CC-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS----LD-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~----~~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
+|+|||+|+.... .+ +.+.+ ..+. .++.+..++|++||...+... +..+
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~~~ 176 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TTPG 176 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CSTT
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CCCC
Confidence 9999999986421 11 11111 1111 134567899999997654311 1112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ..|+.+|...|.+.+.+ + +..++||.+..+-
T Consensus 177 ~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 217 (283)
T 3v8b_A 177 A--TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217 (283)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred c--hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence 2 68999999988777643 2 5889999998763
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=1.6e-10 Score=99.97 Aligned_cols=133 Identities=10% Similarity=-0.007 Sum_probs=90.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
|++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ...++|+|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 47899997 99999999999999 9999999998765544322 2455555664 1 13479999
Q ss_pred EEccCCCC-CC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 147 IFCAPPSR-SL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 147 i~~a~~~~-~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
||+|+... .. + +.+.+ +.++ +.+.+..++|++||...+... .+. .
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~--~ 145 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-----------AGG--N 145 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TTC--H
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-----------CCC--c
Confidence 99998642 11 1 11111 1111 123467899999997754311 112 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
.|+.+|...|.+.+.+ + +.+++||.+.|
T Consensus 146 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 8999999998876543 2 58899999985
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=101.04 Aligned_cols=137 Identities=10% Similarity=0.052 Sum_probs=91.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc---c-----------ccCCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~---~-----------~~~~~D 144 (268)
+..+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. .++..+.+|. + ....+|
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 84 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 84 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 34578999997 99999999999999 9999999998765544322 2355566664 1 134899
Q ss_pred EEEEccCCCCC-C---C-----hHHHH-------HHHH---HH--hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-L---D-----YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~-~---~-----~~~~~-------~~~~---~~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
+|||+|+.... . + +.+.+ .++. .. ..+..++|++||...+.... ..
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~-- 151 (270)
T 1yde_A 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA-----------QA-- 151 (270)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT-----------TC--
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC-----------CC--
Confidence 99999986431 1 0 11111 1111 10 12258999999975432110 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + +.++|||.++++
T Consensus 152 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~ 190 (270)
T 1yde_A 152 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 190 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccc
Confidence 57999999998776653 3 689999999986
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.18 E-value=2.8e-10 Score=98.74 Aligned_cols=135 Identities=12% Similarity=0.009 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhh----hc--CCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDEL----IN--MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l----~~--~~i~~~~~D~---~-----------~~ 140 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++ .+.+ .. ..+..+.+|. + ..
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 367999997 99999999999999 9999999998665 3322 11 2344555664 1 13
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+|+...... +.+.+ +.++ ..+.+. .++|++||...+...
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 148 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF----------- 148 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC-----------
Confidence 48999999998643211 11111 1111 123456 899999998654321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|...|.+.+.+ + +.+++||.+..+
T Consensus 149 ~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 190 (258)
T 3a28_C 149 PIL--SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190 (258)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSH
T ss_pred CCc--hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCCh
Confidence 112 58999999988776543 2 589999999764
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.4e-10 Score=101.60 Aligned_cols=135 Identities=9% Similarity=0.052 Sum_probs=88.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ...+ +..+.+|. + ....
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999997 99999999999999 99999999987654432 2222 33444554 1 2358
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|+|||+|+...... +.+.+ +.++ .++.+..++|++||...+... ...
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-----------~~~ 150 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVV-----------PTA 150 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TTC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccC-----------CCC
Confidence 999999998654321 11111 1111 133466899999998755321 112
Q ss_pred CCCHHHHHHHHHHHHHHHc-----C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-----~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + +..++||.+..+
T Consensus 151 --~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~ 187 (264)
T 3tfo_A 151 --AVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESE 187 (264)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---
T ss_pred --hhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCc
Confidence 57999999888766543 3 578899998765
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=101.30 Aligned_cols=134 Identities=16% Similarity=0.056 Sum_probs=89.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------ccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~~~~~D 144 (268)
+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ....+|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA--GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 68999997 99999999999999 9999999998765443321 1455555664 1 234689
Q ss_pred EEEEccCCCCC-CC--------hHH-------H----HHHHH--HHhcCCC-eEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-LD--------YPG-------D----VRLAA--LSWNGEG-SFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~-------~----~~~~~--~~~~gvk-r~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
+|||+|+.... .. +.+ + ++.++ ..+.+.. ++|++||...+... ...
T Consensus 100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~-----------~~~ 168 (272)
T 2nwq_A 100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY-----------PGS 168 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC-----------TTC
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC-----------CCC
Confidence 99999986431 11 111 1 11111 1234566 99999998754321 112
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + +++++||.+..+
T Consensus 169 --~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~ 207 (272)
T 2nwq_A 169 --HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESE 207 (272)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--
T ss_pred --chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCc
Confidence 57999999999887653 2 688999999876
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-10 Score=102.62 Aligned_cols=135 Identities=17% Similarity=0.091 Sum_probs=92.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ....+|+
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999997 99999999999999 9999999998765544321 2455555664 1 2358999
Q ss_pred EEEccCCCCCC---C-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 146 VIFCAPPSRSL---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|||+|+..... + +.+.+ ..+ + ..+.+..++|++||...+... .+. .
T Consensus 107 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----------~~~--~ 173 (277)
T 3gvc_A 107 LVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV-----------GGT--G 173 (277)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTB--H
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CCc--h
Confidence 99999864321 1 11111 111 1 123556799999997654321 122 5
Q ss_pred HHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|+.+|...|.+.+.+ + +.+++||.++++
T Consensus 174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 211 (277)
T 3gvc_A 174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTP 211 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCc
Confidence 8999999988776643 2 589999999875
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.16 E-value=2.7e-10 Score=100.32 Aligned_cols=168 Identities=11% Similarity=-0.049 Sum_probs=92.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchh----hhcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~----l~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |.||++++++|+++ |++|++++|+ .++.+. +... .+..+.+|. + ...
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467999997 99999999999999 9999999964 333222 2222 345555664 1 234
Q ss_pred CCCEEEEccCCC--CCCC--------hH-------HHHHH----HH--HHhcC---CCeEEEEccCeeecCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPS--RSLD--------YP-------GDVRL----AA--LSWNG---EGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 142 ~~D~Vi~~a~~~--~~~~--------~~-------~~~~~----~~--~~~~g---vkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
.+|+|||+|+.. .... +. .+... ++ ..+.+ ..++|++||...+...
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-------- 178 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS-------- 178 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--------
Confidence 899999999862 1110 11 11111 11 12222 5689999998765321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
... ..|+.+|...|.+.+.+ + +..++||.+..+.......... ............+...+|+|++
T Consensus 179 ---~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~p~~r~~~pedvA~~ 252 (280)
T 4da9_A 179 ---PER--LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYD-GLIESGLVPMRRWGEPEDIGNI 252 (280)
T ss_dssp ----CC--HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------CCBCHHHHHHH
T ss_pred ---CCc--cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHH-HHHhhcCCCcCCcCCHHHHHHH
Confidence 112 57999999988776543 2 5889999998764321110000 0000001122346788999887
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 253 v 253 (280)
T 4da9_A 253 V 253 (280)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=104.06 Aligned_cols=136 Identities=14% Similarity=0.190 Sum_probs=88.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhh----c--CCceeeccCc---c----------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI----N--MGITPSLKWT---E---------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~----~--~~i~~~~~D~---~---------- 138 (268)
++++||||+ |+||++++++|+++ |++|++++|+... .+.+. . ..+..+.+|. +
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 467999997 99999999999999 9999999986321 11211 1 2355555664 1
Q ss_pred -ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...++|+|||+|+...... +.+ +..++. .++.+..++|++||...+....
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~-------- 154 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP-------- 154 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC--------
Confidence 1348999999999643211 111 111111 1345678999999987653210
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
| ....|+.+|...|.+.+.+ + +++++||.+.++
T Consensus 155 ---~-~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 155 ---P-YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp ---S-SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred ---C-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 1 1157999999998776653 3 689999999755
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.9e-10 Score=101.99 Aligned_cols=137 Identities=14% Similarity=0.103 Sum_probs=89.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC--cchh----hhcC--CceeeccCc---c-----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDE----LINM--GITPSLKWT---E----------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~--~~~~----l~~~--~i~~~~~D~---~----------- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++.+|+.+ ..+. +... .+..+.+|. +
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 44578999997 99999999999999 999999988632 1221 1222 344555554 1
Q ss_pred ccCCCCEEEEccCCCCC-C---C-----hHHHHH-------HHHH--Hh--cCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRS-L---D-----YPGDVR-------LAAL--SW--NGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~-~---~-----~~~~~~-------~~~~--~~--~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
....+|+|||+|+.... . + +.+.+. ++.. .. ....++|++||...|...
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~----------- 193 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS----------- 193 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC-----------
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC-----------
Confidence 23589999999996431 1 1 111111 1111 11 123599999998876532
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + +..++||.++++
T Consensus 194 ~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~ 235 (294)
T 3r3s_A 194 PHL--LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTA 235 (294)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccc
Confidence 112 57999999988776543 2 689999999875
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=3e-10 Score=98.83 Aligned_cols=136 Identities=12% Similarity=-0.011 Sum_probs=90.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ ... .+..+.+|. + ...
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3468999997 99999999999999 99999999986554332 222 344555664 1 234
Q ss_pred CCCEEEEccCCC-CCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPS-RSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~-~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
.+|+|||+|+.. .... +.+.+ .++. ..+.+..++|++||...+....
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 152 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP----------- 152 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-----------
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-----------
Confidence 899999999864 2111 11111 1111 1234568999999986554210
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+ + +.+++||.+..+
T Consensus 153 ~~--~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 153 NM--AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp TB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred CC--chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcc
Confidence 12 57999998877665543 3 689999988654
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=3.1e-10 Score=98.00 Aligned_cols=137 Identities=9% Similarity=0.089 Sum_probs=89.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchh----hhcC--CceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINM--GITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~----l~~~--~i~~~~~D~---~-----------~ 139 (268)
...++|||||+ |.||++++++|+++ |++|++++ |+.++... +... .+..+.+|. + .
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 44678999997 99999999999999 99999988 55444322 2222 344555554 1 2
Q ss_pred cCCCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...+|+|||+|+..... + +.+.+ +.++ ..+.+..++|++||...+...
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 157 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ----------- 157 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSC-----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCC-----------
Confidence 35899999999864321 1 11111 1111 134566899999997655321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+. ..|+.+|...|.+.+.+ + ..+++||.+..+
T Consensus 158 ~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 199 (256)
T 3ezl_A 158 FGQ--TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTD 199 (256)
T ss_dssp SCC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred CCC--cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCc
Confidence 122 68999999888776543 2 588999999765
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.9e-10 Score=101.30 Aligned_cols=137 Identities=12% Similarity=0.022 Sum_probs=87.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC----CceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~----~i~~~~~D~---~-----------~ 139 (268)
..++|||||+ |+||++++++|+++ |++|++++|+.++.+.+. .. .+..+.+|. + .
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3468999997 99999999999999 999999999876544321 11 345555664 1 2
Q ss_pred cCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHh------cCCCeEEEEccCeeecCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSW------NGEGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~------~~~------~gvkr~V~~SS~~vYg~~~~~~~ 192 (268)
...+|+|||+|+...... +.+ +..+++ ..+ .+..+||++||...+....
T Consensus 85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~---- 160 (319)
T 3ioy_A 85 FGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG---- 160 (319)
T ss_dssp TCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS----
T ss_pred CCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC----
Confidence 357899999999643211 111 111111 111 1357899999987654210
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHH----HHc---C--ceEEEeCceecCC
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVI----LEF---G--GCVLRLAGLYKAD 234 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l----~~~---~--~tIlRp~~vyG~~ 234 (268)
.. ..|+.+|...+.+. .++ + .++++||.+.++-
T Consensus 161 -------~~--~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 161 -------SP--GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp -------SS--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred -------CC--HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 11 57999999555443 333 3 6889999998763
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.13 E-value=3.7e-10 Score=98.63 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=91.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC----CceeeccCc----------cccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM----GITPSLKWT----------EATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~----~i~~~~~D~----------~~~~~~D 144 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.. ... .+..+.+|. +....+|
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id 87 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD 87 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence 468999997 99999999999999 99999999986554332 111 233445554 1345899
Q ss_pred EEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
++||+|+...... +.+.+ +.++ ..+.+..++|++||...|... .+.
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~-- 154 (267)
T 3t4x_A 88 ILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS-----------QEM-- 154 (267)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----------TTC--
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----------Ccc--
Confidence 9999999654321 11111 1111 133566799999998765321 122
Q ss_pred CHHHHHHHHHHHHHHHc----C-----ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF----G-----GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~----~-----~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ . ...++||.+..+
T Consensus 155 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 193 (267)
T 3t4x_A 155 AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTE 193 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCc
Confidence 68999999998877653 2 578899988764
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.13 E-value=6.6e-10 Score=97.73 Aligned_cols=137 Identities=12% Similarity=0.036 Sum_probs=90.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcC--CceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~--~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++ .+ .+... .+..+.+|. + ..
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3468999997 99999999999999 9999999998643 12 12222 344555553 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHH-------HHHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGD-------VRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.++|+|||+|+...... +.+. ..++. .. ..+..++|++||...+... ..+.
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~ 175 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA----------VPKH 175 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS----------CSSC
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCC----------CCCC
Confidence 58999999998653211 1111 11111 11 1356799999997643211 0112
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + +.+++||.++++
T Consensus 176 --~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 214 (283)
T 1g0o_A 176 --AVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 214 (283)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred --cchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccch
Confidence 68999999988776643 3 689999999875
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=5.7e-11 Score=103.49 Aligned_cols=136 Identities=10% Similarity=-0.071 Sum_probs=87.5
Q ss_pred CCeEEEEc-c--cHHHHHHHHHHHhcCCCCeEEEEeCCCCc---chhhhc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADH---HDELIN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~G-a--G~IG~~L~~~L~~~~~G~~V~~~~R~~~~---~~~l~~--~~i~~~~~D~---~-----------~~~ 141 (268)
.+++|||| + |+||++++++|+++ |++|++++|++.. .+++.. .....+.+|. + ...
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35799998 4 79999999999999 9999999998621 222221 1234455553 1 124
Q ss_pred CCCEEEEccCCCCC----C------C---hHHHH-------HHHHH--Hhc--CCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS----L------D---YPGDV-------RLAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~----~------~---~~~~~-------~~~~~--~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
.+|+|||+|+.... . . +.+.+ .++.. ... ...++|++||...|...
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 156 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---------- 156 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC----------
Confidence 78999999986431 1 1 11111 11111 111 12589999997654321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + ++++|||.++++.
T Consensus 157 -~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 157 -PNY--NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp -TTT--THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred -CCc--hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 112 58999999998877643 2 6899999999874
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=3e-10 Score=98.97 Aligned_cols=164 Identities=12% Similarity=-0.052 Sum_probs=101.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchh----hhc--CCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LIN--MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~----l~~--~~i~~~~~D~---~-----------~~ 140 (268)
+.++|||||+ |.||++++++|+++ |++|+++.+ +.++.+. +.. ..+..+.+|. + ..
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3468999997 99999999999999 999977664 4333222 222 2455555664 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHH-------HHHHH-------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGD-------VRLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+|+...... +.+. ..+++ .++.+..++|++||...+...
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 171 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGN----------- 171 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCC-----------
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCC-----------
Confidence 58999999998654321 1111 11111 124567899999997655321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH---HHHHHcCCccCCCCcccCcccHhhHhhc
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH---VYWLQKGTVDSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~---~~~l~~g~~~~~g~~~~~~Ihv~DlA~a 266 (268)
.+. ..|+.+|...|.+.+.+ + ..+++||.+..+..... ...+....+ ...+...+|+|++
T Consensus 172 ~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~p------~~~~~~~edva~~ 243 (267)
T 4iiu_A 172 RGQ--VNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSMIP------MKRMGQAEEVAGL 243 (267)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHTCT------TCSCBCHHHHHHH
T ss_pred CCC--chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhcCC------CCCCcCHHHHHHH
Confidence 112 58999999777665433 2 58899999998743211 111222221 1236678898887
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 244 ~ 244 (267)
T 4iiu_A 244 A 244 (267)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=1.4e-10 Score=100.92 Aligned_cols=136 Identities=4% Similarity=-0.076 Sum_probs=89.1
Q ss_pred CCCeEEEEcc-cH--HHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---c----CCceeeccCc---c-----------
Q 024417 83 GENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N----MGITPSLKWT---E----------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~--IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~----~~i~~~~~D~---~----------- 138 (268)
..+++||||+ |+ ||++++++|+++ |++|++++|+.+..+.+. . ..+..+.+|. +
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 3568999997 99 999999999999 999999999854332221 1 1455666664 1
Q ss_pred ccCCCCEEEEccCCCCC----CC----hHHHHH-----------HHHH--H--hcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRS----LD----YPGDVR-----------LAAL--S--WNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~----~~----~~~~~~-----------~~~~--~--~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
....+|+|||+|+.... .. ..+... .+.. . .....++|++||...+...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------- 155 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM-------- 155 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC--------
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC--------
Confidence 23589999999986531 11 111111 1111 1 1123589999997654321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 156 ---~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 197 (266)
T 3oig_A 156 ---PNY--NVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTL 197 (266)
T ss_dssp ---TTT--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred ---CCc--chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccc
Confidence 112 58999999988776543 2 588999999875
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=1.3e-09 Score=95.45 Aligned_cols=137 Identities=17% Similarity=0.120 Sum_probs=88.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-------------Ccchh----hhcC--CceeeccCc---c-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------------DHHDE----LINM--GITPSLKWT---E- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-------------~~~~~----l~~~--~i~~~~~D~---~- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|+. ++.+. +... .+..+.+|. +
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3568999997 99999999999999 99999999842 11111 1112 344455554 1
Q ss_pred ----------ccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecC
Q 024417 139 ----------ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDC 186 (268)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~ 186 (268)
....+|++||+|+...... +.+.+ +.++ ..+.+ ..++|++||...+..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM 167 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence 2357999999998654321 11111 1111 12223 468999999876532
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ... ..|+.+|...|.+.+.+ + ...++||.+..+-
T Consensus 168 ~-----------~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 211 (277)
T 3tsc_A 168 Q-----------PFM--IHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211 (277)
T ss_dssp C-----------SSC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred C-----------CCc--hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence 1 012 57999999988777643 2 5889999998764
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=9.4e-10 Score=94.38 Aligned_cols=137 Identities=12% Similarity=0.035 Sum_probs=88.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc---CCceeeccCc-----c---------
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN---MGITPSLKWT-----E--------- 138 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~---~~i~~~~~D~-----~--------- 138 (268)
.+..+++||||+ |.||++++++|+++ |++|++++|++++.+.+ .. .....+..|. +
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~ 88 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV 88 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence 345678999997 99999999999999 99999999987654432 11 2233333332 1
Q ss_pred --ccCCCCEEEEccCCCCC-C---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 --ATQKFPYVIFCAPPSRS-L---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~-~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
....+|+|||+|+.... . + +.+.+ ..+. .++.+..++|++||...+...
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------- 161 (247)
T 3i1j_A 89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGR------- 161 (247)
T ss_dssp HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCC-------
T ss_pred HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCC-------
Confidence 23489999999986421 1 1 11111 1111 134456799999997654321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc--------C--ceEEEeCceec
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF--------G--GCVLRLAGLYK 232 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~--------~--~tIlRp~~vyG 232 (268)
.+. ..|+.+|...|.+.+.+ + ...++||.+..
T Consensus 162 ----~~~--~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t 203 (247)
T 3i1j_A 162 ----ANW--GAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRT 203 (247)
T ss_dssp ----TTC--HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSS
T ss_pred ----CCc--chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC
Confidence 112 58999999988776542 2 46788888754
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.3e-10 Score=99.58 Aligned_cols=136 Identities=10% Similarity=-0.014 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cH--HHHHHHHHHHhcCCCCeEEEEeCCC--Ccchhhhc--CCceeeccCc---c-----------ccCC
Q 024417 84 ENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN--MGITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~--IG~~L~~~L~~~~~G~~V~~~~R~~--~~~~~l~~--~~i~~~~~D~---~-----------~~~~ 142 (268)
.+++||||+ |+ ||++++++|+++ |++|++++|+. +..+.+.. ..+..+.+|. + ....
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 468999996 88 999999999999 99999999987 33333322 2355566664 1 2357
Q ss_pred CCEEEEccCCCCC----CC---------hHHHH-------HHHH---H--HhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRS----LD---------YPGDV-------RLAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 143 ~D~Vi~~a~~~~~----~~---------~~~~~-------~~~~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
.|+|||+|+.... .. +.+.+ ..+. . ......++|++||...+...
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 173 (280)
T 3nrc_A 104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM---------- 173 (280)
T ss_dssp CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC----------
T ss_pred CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC----------
Confidence 9999999986532 11 11111 1111 0 12235799999997754321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
... ..|+.+|...|.+.+.+ + ..+++||.+..+.
T Consensus 174 -~~~--~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 174 -PSY--NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp -TTT--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred -CCc--hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 122 58999999888776543 2 5889999998763
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=2.1e-09 Score=94.49 Aligned_cols=138 Identities=14% Similarity=0.082 Sum_probs=89.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC----------------cchh----hhcC--CceeeccCc-
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----------------HHDE----LINM--GITPSLKWT- 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~----------------~~~~----l~~~--~i~~~~~D~- 137 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.+ +.++ +... .+..+.+|.
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 34578999997 99999999999999 999999998732 1111 1112 344455554
Q ss_pred --c-----------ccCCCCEEEEccCCCCCCC---------hHHHHH-------HH----H--HHhcC-CCeEEEEccC
Q 024417 138 --E-----------ATQKFPYVIFCAPPSRSLD---------YPGDVR-------LA----A--LSWNG-EGSFLFTSSS 181 (268)
Q Consensus 138 --~-----------~~~~~D~Vi~~a~~~~~~~---------~~~~~~-------~~----~--~~~~g-vkr~V~~SS~ 181 (268)
+ ....+|+|||+|+...... +.+.+. .+ + ..+.+ ..++|++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 1 2358999999998643211 111111 11 1 12223 4689999998
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 182 AIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 182 ~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..+... ... ..|+.+|...|.+.+.+ + ...++||.+..+.
T Consensus 167 ~~~~~~-----------~~~--~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (286)
T 3uve_A 167 GGLKAY-----------PHT--GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215 (286)
T ss_dssp GGTSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTT
T ss_pred hhccCC-----------CCc--cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCc
Confidence 765321 112 57999999888776643 2 5889999998774
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.3e-10 Score=99.94 Aligned_cols=166 Identities=12% Similarity=0.050 Sum_probs=99.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ..
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3568999997 99999999999999 9999999998765443221 1135555664 1 23
Q ss_pred CCCCEEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhcC--CCeEEEEccCeeecCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~~~--~~~~g--vkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...|+|||+|+.... . + +.+.+ +.++ ..+.+ ..++|++||...+...
T Consensus 110 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~--------- 180 (281)
T 4dry_A 110 ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR--------- 180 (281)
T ss_dssp SCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC---------
T ss_pred CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC---------
Confidence 589999999986432 1 1 11111 1111 12332 4699999997654211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCc-cCCCCcccCcccHhhHhhc
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTV-DSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~-~~~g~~~~~~Ihv~DlA~a 266 (268)
.+. ..|+.+|...|.+.+.+ + ...++||.+..+-.. .+..+.. .........++..+|+|++
T Consensus 181 --~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----~~~~~~~~~~~~~~~~~~~~pedvA~~ 252 (281)
T 4dry_A 181 --PNS--APYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA----RMSTGVLQANGEVAAEPTIPIEHIAEA 252 (281)
T ss_dssp --TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------CEEECTTSCEEECCCBCHHHHHHH
T ss_pred --CCC--hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh----hhcchhhhhhhcccccCCCCHHHHHHH
Confidence 122 68999999888776543 2 578899988765221 1111111 0111122346788999987
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 253 v 253 (281)
T 4dry_A 253 V 253 (281)
T ss_dssp H
T ss_pred H
Confidence 5
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=4.6e-10 Score=99.67 Aligned_cols=138 Identities=11% Similarity=-0.006 Sum_probs=90.7
Q ss_pred CCCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~-----------~ 139 (268)
+..+++||||+ | .||++++++|+++ |++|++++|+.+..+.+.. ..+..+.+|. + .
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34568999997 6 9999999999999 9999999998654332211 2344555664 1 2
Q ss_pred cCCCCEEEEccCCCCC----C---C-----hHHHHH-------HHHH--H--hcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS----L---D-----YPGDVR-------LAAL--S--WNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~---~-----~~~~~~-------~~~~--~--~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...+|+|||+|+.... . + +.+.+. .+.. . .....++|++||...+...
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~--------- 176 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV--------- 176 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---------
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC---------
Confidence 3589999999986531 1 1 111111 1111 1 1123589999997754321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
... ..|+.+|...|.+.+.+ + +..++||.++.+.
T Consensus 177 --~~~--~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 177 --PHY--NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp --TTT--THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred --CCc--hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 122 68999999988776654 2 5889999999874
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=4.9e-10 Score=98.88 Aligned_cols=69 Identities=13% Similarity=0.047 Sum_probs=51.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc---CCceeeccCc----c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN---MGITPSLKWT----E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~---~~i~~~~~D~----~-----------~ 139 (268)
..++|||||+ |.||++++++|+++ |++|++++|+.++.+. +.. ..+..+.+|. + .
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 3568999997 99999999999999 9999999998765332 222 1345555553 1 1
Q ss_pred cCCCCEEEEccCCC
Q 024417 140 TQKFPYVIFCAPPS 153 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (268)
...+|+|||+|+..
T Consensus 89 ~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 89 FGKLDILVNNAGVA 102 (311)
T ss_dssp HSSCCEEEECCCCC
T ss_pred CCCCCEEEECCccc
Confidence 35899999999964
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.1e-09 Score=96.16 Aligned_cols=135 Identities=9% Similarity=-0.018 Sum_probs=91.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c----c------cCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E----A------TQKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~----~------~~~~ 143 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+. . ..+..+.+|. + . ...+
T Consensus 33 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 33 GRTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 578999997 99999999999999 999999999877654432 1 2344555554 1 1 1489
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|++||+|+...... +.+.+ +.++ ..+.+..++|++||...+.. ..+.
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~~- 178 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP-----------KSVV- 178 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTTB-
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCCc-
Confidence 99999999643211 11111 1111 13346679999999775431 1122
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 179 -~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 217 (275)
T 4imr_A 179 -TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTD 217 (275)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred -hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCc
Confidence 56999999888776643 2 578999999765
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=7e-10 Score=96.72 Aligned_cols=137 Identities=8% Similarity=0.043 Sum_probs=91.7
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc-C---CceeeccCc---c-----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN-M---GITPSLKWT---E----------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~-~---~i~~~~~D~---~----------- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+ .. . .+..+.+|. +
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 99999999987654332 11 1 245555664 1
Q ss_pred ccCCCCEEEEccCCCCCC---C-----hHHHHH-------HHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSL---D-----YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-------~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
.....|++||+|+..... + +.+.+. .+. ..+.+..++|++||...+...
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 153 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE---------- 153 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC----------
Confidence 235899999999864321 1 111111 111 123456789999997654321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 154 -~~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~ 195 (265)
T 3lf2_A 154 -PHM--VATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESG 195 (265)
T ss_dssp -TTB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred -CCc--hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCc
Confidence 112 58999999888776543 2 588999999765
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.09 E-value=4.4e-10 Score=98.91 Aligned_cols=137 Identities=10% Similarity=0.070 Sum_probs=88.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~---~-----------~ 139 (268)
+..++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + .
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 103 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 103 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999999998765443321 1345555664 1 1
Q ss_pred cCCCCEEEEc-cCCCCC---C-C---hHH-------HHHHHH---H--HhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFC-APPSRS---L-D---YPG-------DVRLAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~-a~~~~~---~-~---~~~-------~~~~~~---~--~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..++|+|||+ ++.... + + +.+ +..++. . ...+.+++|++||...+... .
T Consensus 104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 172 (286)
T 1xu9_A 104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY-----------P 172 (286)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-----------T
T ss_pred cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC-----------C
Confidence 3489999999 454321 1 1 111 111111 0 01234799999998754321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHH----c-----C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILE----F-----G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~----~-----~--~tIlRp~~vyG~ 233 (268)
+. ..|+.+|...|.+.+. + + +++++||.+..+
T Consensus 173 ~~--~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~ 215 (286)
T 1xu9_A 173 MV--AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215 (286)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred Cc--cHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence 22 6899999988866543 2 2 588999998653
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.09 E-value=2e-09 Score=93.12 Aligned_cols=136 Identities=14% Similarity=0.098 Sum_probs=89.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceeeccCc-----c----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT-----E---------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~-----~---------- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. +
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence 44678999997 99999999999999 9999999998765443211 1344444443 1
Q ss_pred -ccCCCCEEEEccCCCCC----CC-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSRS----LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~----~~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
....+|+|||+|+.... .+ |.+.+ +.++ .++.+..++|++||...+...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-------- 159 (252)
T 3f1l_A 88 VNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGR-------- 159 (252)
T ss_dssp HHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCC--------
T ss_pred HhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCC--------
Confidence 23489999999986321 11 11111 1111 134567899999997654311
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc----C----ceEEEeCceec
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYK 232 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~----~----~tIlRp~~vyG 232 (268)
... ..|+.+|...|.+.+.+ . ...+.||.+..
T Consensus 160 ---~~~--~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t 199 (252)
T 3f1l_A 160 ---ANW--GAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRT 199 (252)
T ss_dssp ---TTC--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSS
T ss_pred ---CCC--chhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccC
Confidence 112 58999999988776654 2 46778887754
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=9.8e-10 Score=94.88 Aligned_cols=137 Identities=9% Similarity=0.083 Sum_probs=92.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~ 143 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + ....+
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 34578999997 99999999999999 9999999998765544321 2355555664 1 23589
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
|+|||+|+...... +.+.+ +.++ .++.+ ..++|++||...+.... ..
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~ 150 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------NM 150 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------TC
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------Cc
Confidence 99999999653221 11111 1111 12334 57999999987654211 12
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|...+.+.+.+ + ...++||.+..+
T Consensus 151 --~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~ 189 (247)
T 3rwb_A 151 --AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESD 189 (247)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred --hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCc
Confidence 58999998888766543 2 588999999765
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.09 E-value=9.5e-10 Score=95.19 Aligned_cols=159 Identities=9% Similarity=-0.029 Sum_probs=98.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---------CCceeeccCc---c-----------c
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---------MGITPSLKWT---E-----------A 139 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---------~~i~~~~~D~---~-----------~ 139 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + .
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 568999997 99999999999999 9999999998765443221 2344555564 1 2
Q ss_pred cCCCCEEEEccCCCCCC--C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL--D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...+|+|||+|+..... + +.+.+ +.++ .++.+..++|++||...+... .
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 153 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-----------A 153 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------C
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-----------C
Confidence 35899999999864321 1 11111 1111 133466799999997644211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+. ..|+.+|...+.+.+.+ + ...++||.+..+ +.... .. ......++..+|+|+++
T Consensus 154 ~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~----~~~~~--~~----~~~~~~~~~p~dva~~v 218 (250)
T 3nyw_A 154 DG--GIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD----MAKKA--GT----PFKDEEMIQPDDLLNTI 218 (250)
T ss_dssp CT--THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH----HHHHT--TC----CSCGGGSBCHHHHHHHH
T ss_pred CC--cchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc----hhhhc--CC----CcccccCCCHHHHHHHH
Confidence 22 68999999888776543 2 588899998643 11111 11 11223467888888765
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.08 E-value=6.2e-10 Score=98.15 Aligned_cols=138 Identities=10% Similarity=-0.044 Sum_probs=88.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchhh----h-c--CCceeeccCc-------c-------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDEL----I-N--MGITPSLKWT-------E------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~l----~-~--~~i~~~~~D~-------~------- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+. ++.+.+ . . ..+..+.+|. +
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~ 98 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIIN 98 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHH
Confidence 34468999997 99999999999999 99999999987 543322 1 1 1244444442 1
Q ss_pred ----ccCCCCEEEEccCCCCC---------C-----ChHHHHH-----------HHH---H---HhcC------CCeEEE
Q 024417 139 ----ATQKFPYVIFCAPPSRS---------L-----DYPGDVR-----------LAA---L---SWNG------EGSFLF 177 (268)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~---------~-----~~~~~~~-----------~~~---~---~~~g------vkr~V~ 177 (268)
....+|+|||+|+.... + .-.+... .+. . .+.+ ..++|+
T Consensus 99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 178 (288)
T 2x9g_A 99 SCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN 178 (288)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred HHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence 13489999999985321 1 1011111 111 0 1222 469999
Q ss_pred EccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 178 ~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+||...|... .+. ..|+.+|...|.+.+.+ + +.+++||.++++.
T Consensus 179 isS~~~~~~~-----------~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 179 LCDAMVDQPC-----------MAF--SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp ECCTTTTSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred EecccccCCC-----------CCC--chHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 9997765321 122 57999998887766543 3 5889999999875
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.08 E-value=3.1e-10 Score=98.62 Aligned_cols=136 Identities=11% Similarity=0.031 Sum_probs=92.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPY 145 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~ 145 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..+.+|. + ....+|+
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 468999997 99999999999999 9999999998766554432 2345555554 1 2358999
Q ss_pred EEEccCCCCCCC--------hHHHHH-------HHHH---H-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 146 VIFCAPPSRSLD--------YPGDVR-------LAAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~~-------~~~~---~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
+||+|+...... +.+.+. .+.. . .....++|++||...+... .+. ..|
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 152 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH-----------PGM--SVY 152 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC-----------TTB--HHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC-----------CCc--hHH
Confidence 999998654321 111111 1111 1 1123589999998765421 122 589
Q ss_pred HHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 207 ~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+.+|...|.+.+.+ + ...++||.+..+.
T Consensus 153 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 153 SASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence 99999888776543 2 5889999999873
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.8e-09 Score=94.59 Aligned_cols=137 Identities=14% Similarity=0.084 Sum_probs=89.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC------------cch----hhhcC--CceeeccCc---c--
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHD----ELINM--GITPSLKWT---E-- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~------------~~~----~l~~~--~i~~~~~D~---~-- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.+ +.+ .+... .+..+.+|. +
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 3578999997 99999999999999 999999998732 111 12222 344555664 1
Q ss_pred ---------ccCCCCEEEEccCCCCCC----C-----hHHHHH-------HH----H--HHh-cCCCeEEEEccCeeecC
Q 024417 139 ---------ATQKFPYVIFCAPPSRSL----D-----YPGDVR-------LA----A--LSW-NGEGSFLFTSSSAIYDC 186 (268)
Q Consensus 139 ---------~~~~~D~Vi~~a~~~~~~----~-----~~~~~~-------~~----~--~~~-~gvkr~V~~SS~~vYg~ 186 (268)
....+|+|||+|+..... + +.+.+. .+ + ..+ .+..+||++||...+..
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 235899999999853221 1 111111 11 1 122 23579999999775532
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
. ... ..|+.+|...|.+.+.+ + +..++||.+..+.
T Consensus 185 ~-----------~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 228 (299)
T 3t7c_A 185 A-----------ENI--GNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228 (299)
T ss_dssp C-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred C-----------CCc--chHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence 1 112 58999999888776543 2 5889999999874
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.1e-10 Score=100.50 Aligned_cols=132 Identities=10% Similarity=-0.012 Sum_probs=86.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHh-cCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----c-----cCCCCEEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A-----TQKFPYVIF 148 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~-~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~-----~~~~D~Vi~ 148 (268)
.|+++||||+ |.||++++++|++ . |+.|++.+|+++... ..+..+.+|. + . ...+|+|||
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~--g~~v~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~ 76 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNK--NHTVINIDIQQSFSA----ENLKFIKADLTKQQDITNVLDIIKNVSFDGIFL 76 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTST--TEEEEEEESSCCCCC----TTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcC--CcEEEEecccccccc----ccceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence 3678999997 9999999999998 7 899999999765211 2334555553 1 1 237899999
Q ss_pred ccCCCCCC---C-hHHHHH-----------HHHHH--h--cCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 149 CAPPSRSL---D-YPGDVR-----------LAALS--W--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 149 ~a~~~~~~---~-~~~~~~-----------~~~~~--~--~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
+|+..... + -.+..+ .+... . ....++|++||...+... ... ..|+.+
T Consensus 77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~--~~Y~as 143 (244)
T 4e4y_A 77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----------PNS--FAYTLS 143 (244)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----------TTB--HHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----------CCC--chhHHH
Confidence 99964321 1 111111 11110 1 111489999998765321 112 589999
Q ss_pred HHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 210 LLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 210 K~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|...|.+.+.+ + ..+++||.+..+
T Consensus 144 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~ 176 (244)
T 4e4y_A 144 KGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTD 176 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCH
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEecCccCch
Confidence 99998777643 2 689999999865
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.07 E-value=6.1e-10 Score=95.86 Aligned_cols=134 Identities=13% Similarity=0.023 Sum_probs=88.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-e--CCCCcchhhhc--CCceeeccCc-----------cccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-T--MTADHHDELIN--MGITPSLKWT-----------EATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~--R~~~~~~~l~~--~~i~~~~~D~-----------~~~~~~D~V 146 (268)
++++||||+ |.||++++++|+++ |++|+++ + |++++.+.+.. .+.+.. |. +....+|+|
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~l 76 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTI 76 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEE
Confidence 368999997 99999999999999 9999999 6 87665443322 133222 22 124579999
Q ss_pred EEccCCCCC---C---C-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 147 IFCAPPSRS---L---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 147 i~~a~~~~~---~---~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
||+|+.... . + +.+.+ ..+ + ..+.+..++|++||...+... ...
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~~- 144 (244)
T 1zmo_A 77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL-----------AYN- 144 (244)
T ss_dssp EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TTC-
T ss_pred EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC-----------CCc-
Confidence 999985432 1 1 11111 111 1 124567899999998765421 112
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.+ + +.+++||.+..+-
T Consensus 145 -~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 184 (244)
T 1zmo_A 145 -PLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184 (244)
T ss_dssp -TTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 57999999988776543 2 6899999997764
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=2.8e-09 Score=96.94 Aligned_cols=137 Identities=15% Similarity=0.065 Sum_probs=89.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-----------hhcCC--ceeeccCc---c------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMG--ITPSLKWT---E------ 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-----------l~~~~--i~~~~~D~---~------ 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+. +...+ +..+.+|. +
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 44578999997 99999999999999 9999999998765321 22222 34445554 1
Q ss_pred -----ccCCCCEEEEccCCCCCC---C-----hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCC
Q 024417 139 -----ATQKFPYVIFCAPPSRSL---D-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~---~-----~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (268)
...++|+|||+|+..... + +.+. ...+. .++.+..+||++||...+...
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~----- 195 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV----- 195 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-----
Confidence 235899999999864321 1 1111 11111 134566899999997755421
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc------C--ceEEEeCcee
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLY 231 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~------~--~tIlRp~~vy 231 (268)
+.... ..|+.+|...+.+.+.+ + +..+.|+.+.
T Consensus 196 ----~~~~~--~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i 236 (346)
T 3kvo_A 196 ----WFKQH--CAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAI 236 (346)
T ss_dssp ----GTSSS--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCB
T ss_pred ----CCCCc--hHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence 01122 58999999888766543 2 5788898643
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-09 Score=94.52 Aligned_cols=135 Identities=14% Similarity=0.094 Sum_probs=90.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--CCceeeccCc---c--------c----cC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MGITPSLKWT---E--------A----TQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~~i~~~~~D~---~--------~----~~ 141 (268)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+. . ..+..+.+|. + . ..
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999997 99999999999999 999999999865543321 1 1244455554 1 1 45
Q ss_pred CCCEEEEccCC---------CC-C----CC-hHH-------HH----HHHH--HHhcCCCeEEEEccCeeecCCCCCCCC
Q 024417 142 KFPYVIFCAPP---------SR-S----LD-YPG-------DV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (268)
Q Consensus 142 ~~D~Vi~~a~~---------~~-~----~~-~~~-------~~----~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~ 193 (268)
..|+|||+|+. .. . .+ +.+ +. +.++ ..+.+..++|++||...+..
T Consensus 83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------- 155 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQY------- 155 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSC-------
T ss_pred CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCC-------
Confidence 78999999941 11 0 11 211 11 1111 13456789999999875431
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + +.+++||.+..+-
T Consensus 156 -----~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 156 -----MFN--VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -----CSS--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -----CCC--CchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 122 58999999998876543 3 6899999998763
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.2e-09 Score=98.53 Aligned_cols=164 Identities=11% Similarity=-0.125 Sum_probs=101.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchhh----h-c--CCceeeccCc---c-------------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDEL----I-N--MGITPSLKWT---E------------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~l----~-~--~~i~~~~~D~---~------------- 138 (268)
.+++||||+ |.||++++++|+++ |++|++++ |++++.+.+ . . ..+..+.+|. +
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 468999997 99999999999999 99999999 876544332 1 1 1344444443 2
Q ss_pred ----c-----------cCCCCEEEEccCCCCCCC---h---------------HHHHHH-----------H----H--HH
Q 024417 139 ----A-----------TQKFPYVIFCAPPSRSLD---Y---------------PGDVRL-----------A----A--LS 168 (268)
Q Consensus 139 ----~-----------~~~~D~Vi~~a~~~~~~~---~---------------~~~~~~-----------~----~--~~ 168 (268)
. ...+|+|||+|+...... . .+.... + + ..
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 237999999998542110 0 111111 1 1 12
Q ss_pred hcC------CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 169 WNG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 169 ~~g------vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+.+ ..+||++||...+... .+. ..|+.+|...|.+.+.+ + +.+++||.+..+
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~-----------~~~--~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 270 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPL-----------LGY--TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hcCCcCCCCCcEEEEECchhhccCC-----------CCc--HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCC
Confidence 334 5799999997654321 122 58999999988776653 2 689999999887
Q ss_pred CCc-H-HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 234 DRG-A-HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 234 ~~~-~-~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
... + ....+....+.. ..+...+|+|+++
T Consensus 271 ~~~~~~~~~~~~~~~p~~-----~r~~~pedvA~~v 301 (328)
T 2qhx_A 271 DDMPPAVWEGHRSKVPLY-----QRDSSAAEVSDVV 301 (328)
T ss_dssp CCSCHHHHHHHHTTCTTT-----TSCBCHHHHHHHH
T ss_pred ccccHHHHHHHHhhCCCC-----CCCCCHHHHHHHH
Confidence 521 1 111122211111 0367788988865
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.9e-09 Score=94.87 Aligned_cols=136 Identities=11% Similarity=-0.016 Sum_probs=89.3
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~--~~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |+||++++++|+++ |++|++++|+++ ..+.+.. .++..+.+|. + ...
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999994 79999999999999 999999999864 1222222 1244555664 1 134
Q ss_pred CCCEEEEccCCCCC----C---C-----hHHHH-------HHHHH--H---hcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS----L---D-----YPGDV-------RLAAL--S---WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~~-------~~~~~--~---~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
.+|+|||+|+.... . + +.+.+ .++.. . .....++|++||...+...
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 168 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---------- 168 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC----------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC----------
Confidence 89999999986431 1 1 11111 11110 1 1123799999997654321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + +++++||.++++.
T Consensus 169 -~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 169 -PHY--NVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp -TTT--THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred -CCc--cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 112 58999999998776543 3 6899999999874
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.1e-10 Score=99.30 Aligned_cols=137 Identities=10% Similarity=0.003 Sum_probs=89.3
Q ss_pred CCCCeEEEEcc-cH--HHHHHHHHHHhcCCCCeEEEEeCCCCcchh---hhc--CCceeeccCc---c-----------c
Q 024417 82 VGENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN--MGITPSLKWT---E-----------A 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~--IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~---l~~--~~i~~~~~D~---~-----------~ 139 (268)
+..+++||||+ |+ ||++++++|+++ |++|++++|+++..+. +.. ..+..+.+|. + .
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh
Confidence 34578999997 88 999999999999 9999999998432222 211 2345555664 1 2
Q ss_pred cCCCCEEEEccCCCC----CC---C-----hHHHHH-------HHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSR----SL---D-----YPGDVR-------LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~----~~---~-----~~~~~~-------~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...+|++||+|+... .. + +.+.+. .+. . ......++|++||...+...
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~--------- 177 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM--------- 177 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC---------
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC---------
Confidence 358999999999653 11 1 111111 111 1 11234689999998765421
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + +..++||.+..+
T Consensus 178 --~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 219 (293)
T 3grk_A 178 --PNY--NVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTL 219 (293)
T ss_dssp --TTT--THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-
T ss_pred --Cch--HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcch
Confidence 112 68999999988776643 2 588999999876
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=2.9e-10 Score=98.67 Aligned_cols=139 Identities=9% Similarity=-0.034 Sum_probs=87.9
Q ss_pred CCCCCeEEEEc-c--cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---c--CCceeeccCc---c-----------
Q 024417 81 GVGENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N--MGITPSLKWT---E----------- 138 (268)
Q Consensus 81 ~~~m~kVLI~G-a--G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~--~~i~~~~~D~---~----------- 138 (268)
....++||||| + |.||++++++|+++ |++|++++|+....+.+. . ..+..+.+|. +
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 34567999998 4 79999999999999 999999999854332221 1 1355556664 1
Q ss_pred ccCCCCEEEEccCCCCC--------C-ChHHHHH-----------HHHH-H---hcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRS--------L-DYPGDVR-----------LAAL-S---WNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~--------~-~~~~~~~-----------~~~~-~---~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
.....|+|||+|+.... + ...+... .+.. . .....++|++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------- 161 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI------- 161 (271)
T ss_dssp HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-------
T ss_pred HcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC-------
Confidence 23588999999986431 1 1111111 1111 0 1123589999997754321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
... ..|+.+|...|.+.+.+ + ..+++||.+..+-
T Consensus 162 ----~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 162 ----PNY--NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp ----TTT--THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred ----CCc--cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 122 68999999988776543 2 6889999998763
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=6.8e-10 Score=94.88 Aligned_cols=155 Identities=11% Similarity=0.042 Sum_probs=96.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------cc--CCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------AT--QKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~--~~~D~V 146 (268)
.+++||||+ |+||++++++|+++ |++|++++|++++... ....+.+|. + .. .++|+|
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQAD----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTSS----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCcccccc----ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 467999997 99999999999999 9999999998765321 223344553 1 12 489999
Q ss_pred EEccCCCCC----CC-----hHHHH-------HHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 147 IFCAPPSRS----LD-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 147 i~~a~~~~~----~~-----~~~~~-------~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
||+|+.... .+ +.+.+ ..+. .. .....++|++||...|... .+. ..|
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 143 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----------PSM--IGY 143 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTB--HHH
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-----------CCc--HHH
Confidence 999985421 11 11111 1111 11 1113589999998765321 122 589
Q ss_pred HHHHHHHHHHHHHc---------C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEF---------G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~---------~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+|...|.+.+.+ + ++++|||.++++. ...... ......++..+|+|+++
T Consensus 144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~----~~~~~~------~~~~~~~~~~~dvA~~i 205 (236)
T 1ooe_A 144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM----NRKWMP------NADHSSWTPLSFISEHL 205 (236)
T ss_dssp HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH----HHHHST------TCCGGGCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc----hhhcCC------CccccccCCHHHHHHHH
Confidence 99999988776532 1 5799999997652 111111 11123356678888764
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.8e-10 Score=99.94 Aligned_cols=165 Identities=12% Similarity=0.015 Sum_probs=99.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----c------cCCCCEEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A------TQKFPYVIF 148 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~------~~~~D~Vi~ 148 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++........+..+.+|. + . ...+|++||
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~ 85 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN 85 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence 3568999997 99999999999999 99999999965443222223455566664 1 1 248999999
Q ss_pred ccCCCC----------CC--ChHHHHH-------HHH------HHh--------cCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 149 CAPPSR----------SL--DYPGDVR-------LAA------LSW--------NGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 149 ~a~~~~----------~~--~~~~~~~-------~~~------~~~--------~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
+|+... .+ ++.+.+. .+. ..+ .+..++|++||...+...
T Consensus 86 nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 157 (257)
T 3tl3_A 86 CAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQ-------- 157 (257)
T ss_dssp CGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCH--------
T ss_pred CCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCC--------
Confidence 998531 11 1111111 111 112 234589999998765321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcHH----HHHHHcCCccCCCCcccCcccHhh
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGAH----VYWLQKGTVDSRPDHILNLIHYEL 262 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~~----~~~l~~g~~~~~g~~~~~~Ihv~D 262 (268)
.+. ..|+.+|...|.+.+.+ + ...++||.+..+-.... ...+....+. ...+.+.+|
T Consensus 158 ---~~~--~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~r~~~p~d 227 (257)
T 3tl3_A 158 ---IGQ--AAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPH-----PSRLGNPDE 227 (257)
T ss_dssp ---HHH--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSS-----SCSCBCHHH
T ss_pred ---CCC--ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCC-----CCCccCHHH
Confidence 011 57999999888766543 2 58899999987643211 1112221111 123678899
Q ss_pred Hhhcc
Q 024417 263 PSRLQ 267 (268)
Q Consensus 263 lA~ai 267 (268)
+|+++
T Consensus 228 va~~v 232 (257)
T 3tl3_A 228 YGALA 232 (257)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98865
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.2e-09 Score=95.00 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=88.7
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~--~~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |+||++++++|+++ |++|++++|+++ ..+++.. ..+..+.+|. + ...
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999994 79999999999999 999999999864 2222222 1245555664 1 124
Q ss_pred CCCEEEEccCCCCC----C---C-----hHHHH-------HHHHHH-hc---CCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS----L---D-----YPGDV-------RLAALS-WN---GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~~-------~~~~~~-~~---gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
++|+|||+|+.... . + +.+.+ .++... .. ...++|++||...+...
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------- 154 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV----------- 154 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC-----------
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC-----------
Confidence 79999999986431 1 1 11111 111111 11 12589999997654321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + +++++||.++++.
T Consensus 155 ~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 155 PKY--NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred CCc--hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 112 57999999998876643 3 6899999999874
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.9e-09 Score=93.33 Aligned_cols=136 Identities=12% Similarity=-0.044 Sum_probs=87.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh-----------hc--CCceeeccCc---c-------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------IN--MGITPSLKWT---E------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l-----------~~--~~i~~~~~D~---~------- 138 (268)
..+++||||+ |.||++++++|.++ |++|++++|+.++.+.+ .. ..+..+.+|. +
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 3578999997 99999999999999 99999999987642211 11 1234455554 1
Q ss_pred ----ccCCCCEEEEccCCCCCCC--------hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCC
Q 024417 139 ----ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (268)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~ 193 (268)
....+|++||+|+...... +.+.+ ..+ + ..+.+..++|++||...+....
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----- 157 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW----- 157 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-----
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----
Confidence 2358999999998643221 11111 111 1 1334568999999976543210
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
.... ..|+.+|...+.+.+.+ + ...++||.+.
T Consensus 158 ----~~~~--~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v 198 (274)
T 3e03_A 158 ----WGAH--TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVI 198 (274)
T ss_dssp ----HHHC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCB
T ss_pred ----CCCC--chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCccc
Confidence 0012 57999999888776543 2 5788998544
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.2e-09 Score=93.97 Aligned_cols=135 Identities=11% Similarity=0.005 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC---eEEEEeCCCCcchhhhc--------CCceeeccCc---c----------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC---QIYGQTMTADHHDELIN--------MGITPSLKWT---E---------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~---~V~~~~R~~~~~~~l~~--------~~i~~~~~D~---~---------- 138 (268)
.+++||||+ |.||++++++|+++ |+ +|++.+|+.++.+++.. ..+..+.+|. +
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~--G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEA--SNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHH--HTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred CCEEEEecCCChHHHHHHHHHHHc--CCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 578999997 99999999999999 87 99999998765544321 1244455553 1
Q ss_pred -ccCCCCEEEEccCCCC-C---CC-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSR-S---LD-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~-~---~~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
....+|+|||+|+... . .+ +.+.+ ..+ + .++.+..++|++||...+...
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~-------- 182 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAY-------- 182 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC--------
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCC--------
Confidence 2357999999998543 1 11 11111 111 1 134567899999997654311
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + ...++||.+..+
T Consensus 183 ---~~~--~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~ 224 (287)
T 3rku_A 183 ---PTG--SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETE 224 (287)
T ss_dssp ---TTC--HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESS
T ss_pred ---CCC--chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCc
Confidence 112 58999999888776543 2 588999999865
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.6e-09 Score=92.52 Aligned_cols=136 Identities=10% Similarity=0.027 Sum_probs=90.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
+++||||+ |.||++++++|+++..|+.|++.+|+.++.+.+.. ..+..+.+|. + ....+|++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 82 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSL 82 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEE
Confidence 67999997 99999999999998223789999998766554432 2345555664 1 23589999
Q ss_pred EEccCCCCC-C---C-----hHHHH-------HHH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 147 IFCAPPSRS-L---D-----YPGDV-------RLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 147 i~~a~~~~~-~---~-----~~~~~-------~~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
||+|+.... . + +.+.+ ..+ + .++.+ .++|++||...+... .+. .
T Consensus 83 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~-----------~~~--~ 148 (254)
T 3kzv_A 83 VANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYF-----------SSW--G 148 (254)
T ss_dssp EEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSS-----------CCS--H
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCC-----------CCc--c
Confidence 999986321 1 1 11111 111 1 12334 799999998765421 122 5
Q ss_pred HHHHHHHHHHHHHHHc-----C--ceEEEeCceecCC
Q 024417 205 PRTDVLLKAEKVILEF-----G--GCVLRLAGLYKAD 234 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~-----~--~tIlRp~~vyG~~ 234 (268)
.|+.+|...|.+.+.+ + ...++||.+..+-
T Consensus 149 ~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~ 185 (254)
T 3kzv_A 149 AYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDM 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCC
T ss_pred hHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchh
Confidence 8999999988776643 2 5889999998763
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.8e-09 Score=93.39 Aligned_cols=164 Identities=10% Similarity=0.061 Sum_probs=100.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c----------ccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E----------ATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~----------~~~~~D~V 146 (268)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. ..+..+.+|. + .....|+|
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 457999997 99999999999999 9999999998766544322 2455666664 1 12478999
Q ss_pred EEcc-CCCCCC--------C-----hHHHH-------HHHH------HHh------cCCCeEEEEccCeeecCCCCCCCC
Q 024417 147 IFCA-PPSRSL--------D-----YPGDV-------RLAA------LSW------NGEGSFLFTSSSAIYDCSDNGACD 193 (268)
Q Consensus 147 i~~a-~~~~~~--------~-----~~~~~-------~~~~------~~~------~gvkr~V~~SS~~vYg~~~~~~~~ 193 (268)
||++ +..... + +.+.+ .++. ... .+..++|++||...+...
T Consensus 108 v~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 181 (281)
T 3ppi_A 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQ------ 181 (281)
T ss_dssp EECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCC------
T ss_pred EEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCC------
Confidence 9994 432110 1 11111 1111 111 245689999998765321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCc----HHHHHHHcCCccCCCCcccCcccH
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRG----AHVYWLQKGTVDSRPDHILNLIHY 260 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~----~~~~~l~~g~~~~~g~~~~~~Ihv 260 (268)
... ..|+.+|...|.+.+.+ + +..++||.+..+-.. .....+....+. ...+++.
T Consensus 182 -----~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~~p 249 (281)
T 3ppi_A 182 -----IGQ--TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPF-----PKRLGTP 249 (281)
T ss_dssp -----TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCS-----SSSCBCH
T ss_pred -----CCC--cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCC-----CCCCCCH
Confidence 122 58999999888766543 2 588999999754110 011112221111 1347888
Q ss_pred hhHhhcc
Q 024417 261 ELPSRLQ 267 (268)
Q Consensus 261 ~DlA~ai 267 (268)
+|+|+++
T Consensus 250 edvA~~v 256 (281)
T 3ppi_A 250 DEFADAA 256 (281)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998875
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-10 Score=97.91 Aligned_cols=124 Identities=15% Similarity=0.053 Sum_probs=82.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCC-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR- 154 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~- 154 (268)
.+++||||+ |.||++++++|.++ |++|++++|+.+ . ...|. +.+..+|++||+|+...
T Consensus 6 ~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~-~----------D~~~~~~v~~~~~~~g~id~lv~nAg~~~~ 72 (223)
T 3uce_A 6 KTVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG-L----------DISDEKSVYHYFETIGAFDHLIVTAGSYAP 72 (223)
T ss_dssp CEEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT-C----------CTTCHHHHHHHHHHHCSEEEEEECCCCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc-c----------CCCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 467999997 99999999999999 999999998754 0 11111 23468999999999642
Q ss_pred CC---C-----hHHHHH-------HHHH--Hh--cCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 024417 155 SL---D-----YPGDVR-------LAAL--SW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (268)
Q Consensus 155 ~~---~-----~~~~~~-------~~~~--~~--~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~ 215 (268)
.. + +.+.+. .+.. .. ....++|++||...+... .+. ..|+.+|...|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~~--~~Y~asK~a~~~ 139 (223)
T 3uce_A 73 AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----------ANT--YVKAAINAAIEA 139 (223)
T ss_dssp CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----------TTC--HHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----------CCc--hHHHHHHHHHHH
Confidence 11 1 111111 1111 11 112489999998765421 122 589999999887
Q ss_pred HHHHcC-------ceEEEeCceecC
Q 024417 216 VILEFG-------GCVLRLAGLYKA 233 (268)
Q Consensus 216 ~l~~~~-------~tIlRp~~vyG~ 233 (268)
+.+.+. ...++||.+..+
T Consensus 140 ~~~~la~e~~~i~vn~v~PG~v~t~ 164 (223)
T 3uce_A 140 TTKVLAKELAPIRVNAISPGLTKTE 164 (223)
T ss_dssp HHHHHHHHHTTSEEEEEEECSBCSG
T ss_pred HHHHHHHhhcCcEEEEEEeCCCcch
Confidence 766542 578899999876
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.4e-09 Score=92.69 Aligned_cols=135 Identities=11% Similarity=0.047 Sum_probs=87.6
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh-----------hhcC--CceeeccCc---c------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINM--GITPSLKWT---E------ 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~-----------l~~~--~i~~~~~D~---~------ 138 (268)
+..+++||||+ |.||++++++|+++ |++|++++|+.++.+. +... .+..+.+|. +
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 34578999997 99999999999999 9999999998764221 2222 244455564 1
Q ss_pred -----ccCCCCEEEEccCCCCCCC--------hHHHHH-H------HH------HHhcCCCeEEEEccCeeecCCCCCCC
Q 024417 139 -----ATQKFPYVIFCAPPSRSLD--------YPGDVR-L------AA------LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (268)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~------~~------~~~~gvkr~V~~SS~~vYg~~~~~~~ 192 (268)
....+|++||+|+...... +.+.+. | +. .++.+..++|++||...+...
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 159 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----- 159 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-----
Confidence 2348999999999643211 111111 1 11 123356799999997644321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCce
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~v 230 (268)
..+. ..|+.+|...|.+.+.+ + ...++||.+
T Consensus 160 -----~~~~--~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~ 199 (285)
T 3sc4_A 160 -----WLRP--TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTT 199 (285)
T ss_dssp -----GSCS--HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSC
T ss_pred -----CCCC--chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCc
Confidence 0111 58999999888776543 2 578899853
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.00 E-value=1.7e-09 Score=97.39 Aligned_cols=134 Identities=13% Similarity=0.011 Sum_probs=88.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc--------CCceeeccCc---c----cc----
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN--------MGITPSLKWT---E----AT---- 140 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~--------~~i~~~~~D~---~----~~---- 140 (268)
++|||||+ |.||++++++|+++ |++|+.+.|+.++.+.+ .. ..+..+.+|. + .+
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 57999997 99999999999999 99998888765443221 11 2355556664 1 12
Q ss_pred -CCCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 -QKFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 -~~~D~Vi~~a~~~~~~~--------~~~~-------~~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..+|+|||+|+...... +.+. ..++. +++.+..+||++||...+... +
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~---------~- 150 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL---------P- 150 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC---------T-
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC---------C-
Confidence 35999999998643211 1111 11111 133567899999997654321 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...|.+.+.+ + +++++||.+..+
T Consensus 151 -~~--~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 151 -FN--DVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (327)
T ss_dssp -TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred -CC--hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccCh
Confidence 12 58999999998776543 3 689999999765
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.3e-09 Score=101.82 Aligned_cols=163 Identities=13% Similarity=0.032 Sum_probs=97.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEEeCCCCcc-------hhhhcCC--ceeeccCc---c----cc----
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHH-------DELINMG--ITPSLKWT---E----AT---- 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~-------~~l~~~~--i~~~~~D~---~----~~---- 140 (268)
..+++||||+ |+||++++++|.++ |++ |++++|+.... +++...+ +..+.+|. + .+
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3568999996 99999999999999 995 99999975421 1233333 44455664 1 22
Q ss_pred --CCCCEEEEccCCCCCCC--------h-------HHHHHHHH--HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCC
Q 024417 141 --QKFPYVIFCAPPSRSLD--------Y-------PGDVRLAA--LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 141 --~~~D~Vi~~a~~~~~~~--------~-------~~~~~~~~--~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p 200 (268)
...|+|||+|+...... + +.+..++. ....+.++||++||.. ++|.. .
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~------------g 370 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP------------G 370 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT------------T
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCC------------C
Confidence 24699999999654321 1 12222232 1344678999999974 44421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
...|+.+|...|.+..+. + +++++|+.+++++.... .. .... ......+++.+|+++++
T Consensus 371 --~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~--~~-~~~~---~~~g~~~i~~e~~a~~l 434 (486)
T 2fr1_A 371 --LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEG--PV-ADRF---RRHGVIEMPPETACRAL 434 (486)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---------------C---TTTTEECBCHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccch--hH-HHHH---HhcCCCCCCHHHHHHHH
Confidence 156888898877665433 3 79999999987642110 00 0011 11234567888887664
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-09 Score=95.76 Aligned_cols=135 Identities=14% Similarity=0.093 Sum_probs=87.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc------------chh----hhcC--CceeeccCc---c---
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH------------HDE----LINM--GITPSLKWT---E--- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~------------~~~----l~~~--~i~~~~~D~---~--- 138 (268)
.+++||||+ |.||++++++|+++ |++|++++|+... .+. +... .+..+.+|. +
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 468999997 99999999999999 9999999886211 111 1112 344455554 1
Q ss_pred --------ccCCCCEEEEccCCCCCC---C-----hHHHHH-------H----HH--HHhcC-CCeEEEEccCeeecCCC
Q 024417 139 --------ATQKFPYVIFCAPPSRSL---D-----YPGDVR-------L----AA--LSWNG-EGSFLFTSSSAIYDCSD 188 (268)
Q Consensus 139 --------~~~~~D~Vi~~a~~~~~~---~-----~~~~~~-------~----~~--~~~~g-vkr~V~~SS~~vYg~~~ 188 (268)
....+|+|||+|+..... + +.+.+. . ++ ..+.+ ..+||++||...+...
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~- 202 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA- 202 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC-
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC-
Confidence 235899999999864321 1 111111 1 11 12222 4689999998765321
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 189 ~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + +..++||.++++
T Consensus 203 ----------~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 244 (317)
T 3oec_A 203 ----------PGQ--SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTE 244 (317)
T ss_dssp ----------TTB--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred ----------CCC--cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCc
Confidence 112 58999999988776643 2 588999999875
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=4.3e-09 Score=90.22 Aligned_cols=131 Identities=11% Similarity=0.069 Sum_probs=86.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----------cc--CCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----------AT--QKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----------~~--~~~D~V 146 (268)
++++||||+ |.||++++++|+++ |++|++++|++++... ....+.+|. + .. .++|+|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEAS----ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSS----EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhccC----CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 468999997 99999999999999 9999999998765321 223344553 1 12 489999
Q ss_pred EEccCCCCC----CC-----hHHHH-------HHHH---HH-hcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 147 IFCAPPSRS----LD-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 147 i~~a~~~~~----~~-----~~~~~-------~~~~---~~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
||+|+.... .+ +.+.+ ..+. .. .....++|++||...+... .+. ..|
T Consensus 81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~--~~Y 147 (241)
T 1dhr_A 81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-----------PGM--IGY 147 (241)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TTB--HHH
T ss_pred EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-----------CCc--hHH
Confidence 999985421 11 11111 1111 11 1112589999998765421 112 589
Q ss_pred HHHHHHHHHHHHHc---------C--ceEEEeCceecC
Q 024417 207 TDVLLKAEKVILEF---------G--GCVLRLAGLYKA 233 (268)
Q Consensus 207 ~~sK~~aE~~l~~~---------~--~tIlRp~~vyG~ 233 (268)
+.+|...|.+.+.+ + +++++||.+-.+
T Consensus 148 ~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~ 185 (241)
T 1dhr_A 148 GMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 185 (241)
T ss_dssp HHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence 99999998877643 2 578999988643
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=5.2e-09 Score=92.54 Aligned_cols=135 Identities=12% Similarity=-0.079 Sum_probs=88.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchhh----h-c--CCceeeccCc---c-------------
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDEL----I-N--MGITPSLKWT---E------------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~l----~-~--~~i~~~~~D~---~------------- 138 (268)
.+++||||+ |.||++++++|+++ |++|++++ |+.++.+.+ . . ..+..+.+|. +
T Consensus 9 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 9 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 468999997 99999999999999 99999999 876543322 1 1 1344444443 2
Q ss_pred ----c-----------cCCCCEEEEccCCCCCC---C-h--------------HHHHHH-----------H----H--HH
Q 024417 139 ----A-----------TQKFPYVIFCAPPSRSL---D-Y--------------PGDVRL-----------A----A--LS 168 (268)
Q Consensus 139 ----~-----------~~~~D~Vi~~a~~~~~~---~-~--------------~~~~~~-----------~----~--~~ 168 (268)
. ...+|+|||+|+..... + - .+.... + + +.
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 1 23799999999854211 0 0 111111 1 1 12
Q ss_pred hcC------CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 169 WNG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 169 ~~g------vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+.+ ..++|++||...+... ... ..|+.+|...+.+.+.+ + +..++||.+..+
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~~~-----------~~~--~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 233 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQPL-----------LGY--TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 233 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCC-----------TTC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred hcCCCCCCCCcEEEEEechhhcCCC-----------CCC--chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCC
Confidence 334 5799999997754321 112 58999999888776543 2 588999998654
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.1e-09 Score=93.47 Aligned_cols=169 Identities=11% Similarity=-0.021 Sum_probs=95.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchh----hhcC--CceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LINM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~----l~~~--~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|+++.+ +.+..+. +... .+..+.+|. + ..
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3578999997 99999999999999 999999854 4433222 2222 345555664 1 23
Q ss_pred CCCCEEEEccCCC-CCC---C-----hHHHHH-------HHHH--Hhc--CCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPS-RSL---D-----YPGDVR-------LAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 141 ~~~D~Vi~~a~~~-~~~---~-----~~~~~~-------~~~~--~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
..+|+|||+|+.. ... + +.+.+. .+.. ... ...++|++||...+... ...
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~ 154 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG----------GPG 154 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC----------STT
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC----------CCC
Confidence 5899999999854 111 1 111111 1111 111 13489999998766211 011
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C----ceEEEeCceecCCCcHHH-HHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 201 IGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRGAHV-YWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~----~----~tIlRp~~vyG~~~~~~~-~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
. ..|+.+|...|.+.+.+ + ...+.||.+..+-..... .... +..........+.+.+|+|+++
T Consensus 155 ~--~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~~p~~r~~~pedva~~v 226 (259)
T 3edm_A 155 A--LAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVR--ERVAGATSLKREGSSEDVAGLV 226 (259)
T ss_dssp C--HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC------------------------CCBCHHHHHHHH
T ss_pred c--HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHH--HHHHhcCCCCCCcCHHHHHHHH
Confidence 2 58999999988877654 2 578899998765321110 0000 0011122233467888988765
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.5e-09 Score=92.61 Aligned_cols=163 Identities=9% Similarity=-0.090 Sum_probs=97.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchhh----hcC--CceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----INM--GITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~l----~~~--~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |.||++++++|+++ |++|++.++. .+..+.+ ... .+..+.+|. + ...
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357999997 99999999999999 9999988554 3333222 222 344455554 1 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
.+|++||+|+...... +.+.+ .+++ . ......++|++||...+.... ..
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~~- 172 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----------SY- 172 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----------TC-
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----------Cc-
Confidence 8999999998653221 11111 1111 1 111235899999987654211 12
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCCCcH-----HHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKADRGA-----HVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~~~~-----~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
..|+.+|...|.+.+.+ + ...++||.+..+-... ....+... .....+...+|+|+++
T Consensus 173 -~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~------~p~~r~~~pedvA~~v 244 (267)
T 3u5t_A 173 -GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKL------APLERLGTPQDIAGAV 244 (267)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTS------STTCSCBCHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhc------CCCCCCcCHHHHHHHH
Confidence 58999999998877643 2 5789999997653111 01111111 1223467788988865
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.4e-08 Score=88.63 Aligned_cols=140 Identities=11% Similarity=0.046 Sum_probs=89.4
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chh----hhcC--CceeeccCc---c-----------
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM--GITPSLKWT---E----------- 138 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~----l~~~--~i~~~~~D~---~----------- 138 (268)
.+..+++||||+ |.||++++++|+++ |++|++++++... .+. +... .+..+.+|. +
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 345678999997 99999999999999 9999998775432 222 2222 345555664 1
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHHHHH-------HHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSLD--------YPGDVR-------LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~~-------~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
....+|++||+|+...... +.+.+. .+. . ......++|++||..... .+..
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~ 162 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD----------FSVP 162 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT----------CCCT
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc----------CCCC
Confidence 2358999999999654321 111111 111 1 111235999999965211 0111
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
+. ..|+.+|...|.+.+.+ + ...++||.+..+.
T Consensus 163 ~~--~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 163 KH--SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred CC--chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 22 68999999988776643 2 5889999998763
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=82.58 Aligned_cols=90 Identities=20% Similarity=0.178 Sum_probs=65.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~ 154 (268)
+|++|+|+|+|++|+.+++.|.+. | ++|++++|++++.+.+...+++....|. +.+.++|+||++++...
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~ 81 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFL 81 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchh
Confidence 357899999999999999999999 9 9999999988777666656766666554 25689999999996432
Q ss_pred CCChHHHHHHHHHHhcCCCeEEEEc
Q 024417 155 SLDYPGDVRLAALSWNGEGSFLFTS 179 (268)
Q Consensus 155 ~~~~~~~~~~~~~~~~gvkr~V~~S 179 (268)
...+... ..+.+++++.+.+
T Consensus 82 ----~~~~~~~-~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 82 ----TPIIAKA-AKAAGAHYFDLTE 101 (118)
T ss_dssp ----HHHHHHH-HHHTTCEEECCCS
T ss_pred ----hHHHHHH-HHHhCCCEEEecC
Confidence 2222222 2456766665444
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.96 E-value=2.1e-08 Score=87.81 Aligned_cols=138 Identities=12% Similarity=0.048 Sum_probs=88.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchh----hhcC--CceeeccCc---c-----------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE----LINM--GITPSLKWT---E-----------AT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~----l~~~--~i~~~~~D~---~-----------~~ 140 (268)
..+++||||+ |.||++++++|+++ |++|++++++.. +.+. +... .+..+.+|. + ..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3578999997 99999999999999 999999877542 2222 2222 344455554 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHHH-------HHH---H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDVR-------LAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~~-------~~~---~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
..+|+|||+|+...... +.+.+. .+. . ......++|++||....-. +..+.
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------~~~~~ 177 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------PWPGI 177 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------CSTTC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------CCCCc
Confidence 48999999998653221 111111 111 1 1123579999998542110 11122
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.+.+ + ...++||.+..+.
T Consensus 178 --~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 178 --SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred --hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence 68999999888776543 2 5889999998774
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.96 E-value=5.5e-09 Score=99.86 Aligned_cols=133 Identities=15% Similarity=0.121 Sum_probs=88.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCc---c----hhhhcCC--ceeeccCc---c----cc--CCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---H----DELINMG--ITPSLKWT---E----AT--QKF 143 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~---~----~~l~~~~--i~~~~~D~---~----~~--~~~ 143 (268)
.+++||||+ |+||++++++|.++ |+ +|+.+.|+... . +++...+ +..+.+|. + .+ ..+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 568999996 99999999999999 99 58888997532 1 2233334 44455664 1 23 459
Q ss_pred CEEEEccCCCCCCC--------hH-------HHHHHHHH--Hhc-CCCeEEEEccC-eeecCCCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YP-------GDVRLAAL--SWN-GEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~-------~~~~~~~~--~~~-gvkr~V~~SS~-~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|+|||+|+...... +. .+..++.. ... +.++||++||. ++||.. . ..
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~------------g--~~ 402 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNA------------G--QG 402 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCT------------T--BH
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCC------------C--CH
Confidence 99999999654321 11 11122221 122 67899999997 445521 1 15
Q ss_pred HHHHHHHHHHHHHHHc---C--ceEEEeCceec
Q 024417 205 PRTDVLLKAEKVILEF---G--GCVLRLAGLYK 232 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG 232 (268)
.|+.+|...|.+.++. + +++++||.+-+
T Consensus 403 ~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~ 435 (511)
T 2z5l_A 403 AYAAANAALDALAERRRAAGLPATSVAWGLWGG 435 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEECCcccC
Confidence 8999999998877643 3 79999998743
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=3.6e-09 Score=92.60 Aligned_cols=136 Identities=9% Similarity=-0.058 Sum_probs=88.5
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCC---cchhhhc--CCceeeccCc---c-----------ccC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN--MGITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~---~~~~l~~--~~i~~~~~D~---~-----------~~~ 141 (268)
.+++||||+ |.||++++++|+++ |++|++++|+++ ..+++.. ..+..+.+|. + ...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999994 79999999999999 999999999875 2222322 1245555664 1 134
Q ss_pred CCCEEEEccCCCCC----C---C-----hHHHH-------HHHHH--Hhc--CCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS----L---D-----YPGDV-------RLAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~~-------~~~~~--~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
.+|+|||+|+.... . + +.+.+ ..+.. ... ...++|++||...+...
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----------- 152 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------- 152 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC-----------
Confidence 78999999986431 1 1 11111 11111 111 12589999997653211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
.+. ..|+.+|...|.+.+.+ + +++++||.+.++.
T Consensus 153 ~~~--~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 153 AHY--NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp TTC--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred CCc--hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 112 57999999988776643 3 6899999998863
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.94 E-value=8.1e-09 Score=89.59 Aligned_cols=166 Identities=10% Similarity=-0.075 Sum_probs=101.0
Q ss_pred CCCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-h----hhh---cCCceeeccCc---c----------
Q 024417 83 GENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-D----ELI---NMGITPSLKWT---E---------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~----~l~---~~~i~~~~~D~---~---------- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++. . ++. ...+..+.+|. +
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 3568999984 59999999999999 99999999876543 1 121 12344555554 1
Q ss_pred -ccCCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
.....|+|||+|+...... +.+.+ .++. ..+.+..++|++||...+...
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 167 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIAN--------- 167 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccC---------
Confidence 2458899999998643211 11111 1111 134466899999997654321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc----C----ceEEEeCceecCCCcH----HHHHHHcCCccCCCCcccCcccHhhHh
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRGA----HVYWLQKGTVDSRPDHILNLIHYELPS 264 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~----~----~tIlRp~~vyG~~~~~----~~~~l~~g~~~~~g~~~~~~Ihv~DlA 264 (268)
+..+. ..|+.+|...|.+.+.+ . ...+.||.+..+-... ....+.... ....+.+.+|+|
T Consensus 168 ~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~------~~~r~~~~~dva 239 (267)
T 3gdg_A 168 FPQEQ--TSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMI------PMGRDGLAKELK 239 (267)
T ss_dssp SSSCC--HHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTS------TTSSCEETHHHH
T ss_pred CCCCC--CcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcC------CCCCCcCHHHHH
Confidence 00122 68999999988877654 2 4678899887653211 111122211 223356778887
Q ss_pred hcc
Q 024417 265 RLQ 267 (268)
Q Consensus 265 ~ai 267 (268)
+++
T Consensus 240 ~~~ 242 (267)
T 3gdg_A 240 GAY 242 (267)
T ss_dssp HHH
T ss_pred hHh
Confidence 764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.93 E-value=4.1e-09 Score=94.51 Aligned_cols=133 Identities=14% Similarity=0.104 Sum_probs=84.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC----------CCcchh----hhcCC--ceeeccCc---c-----
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT----------ADHHDE----LINMG--ITPSLKWT---E----- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~----------~~~~~~----l~~~~--i~~~~~D~---~----- 138 (268)
.+++||||+ |.||++++++|+++ |++|++++|+ .+..+. +...+ +..+.+|. +
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 467999997 99999999999999 9999999987 333222 22222 34445554 1
Q ss_pred ------ccCCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHh---cC---CCeEEEEccCeeec
Q 024417 139 ------ATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSW---NG---EGSFLFTSSSAIYD 185 (268)
Q Consensus 139 ------~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~~~------~~~---~g---vkr~V~~SS~~vYg 185 (268)
....+|+|||+|+...... +.+.+ ..++ ... .+ -.+||++||...+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 2348999999999654221 11111 1111 011 11 14999999977653
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 186 ~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
... .. ..|+.+|...|.+.+.+ + +..++|| +..
T Consensus 185 ~~~-----------~~--~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t 226 (322)
T 3qlj_A 185 GSV-----------GQ--GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ART 226 (322)
T ss_dssp CBT-----------TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTS
T ss_pred CCC-----------CC--ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCC
Confidence 211 12 58999999988877653 2 5888998 543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.92 E-value=5.5e-10 Score=96.21 Aligned_cols=137 Identities=12% Similarity=0.007 Sum_probs=85.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchh----hhcCC--ceeeccCc---c----c-------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINMG--ITPSLKWT---E----A-------T 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~----l~~~~--i~~~~~D~---~----~-------~ 140 (268)
..+++||||+ |.||++++++|+++ |++|+++. |+.++.+. +...+ +..+.+|. + . .
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 3568999997 99999999999999 99999874 44433322 22222 33344443 1 1 1
Q ss_pred ------CCCCEEEEccCCCCCCC----hHHHHH-----------HHHHH----hcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 141 ------QKFPYVIFCAPPSRSLD----YPGDVR-----------LAALS----WNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 141 ------~~~D~Vi~~a~~~~~~~----~~~~~~-----------~~~~~----~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
..+|+|||+|+...... -.+..+ .+... ..+..++|++||...+...
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------- 155 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-------- 155 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC--------
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC--------
Confidence 23999999998643221 111111 11111 1123589999997754321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecCC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~~ 234 (268)
... ..|+.+|...|.+.+.+ + ...++||.+..+-
T Consensus 156 ---~~~--~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 156 ---PDF--IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp ---TTB--HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred ---CCc--chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence 112 58999999888776543 2 5889999998763
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-08 Score=89.49 Aligned_cols=135 Identities=19% Similarity=0.092 Sum_probs=89.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc---c-----------ccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT---E-----------ATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~~~~D 144 (268)
..+++||||+ |.||++++++|+++ |++|++++|+.++.+++.. ..+..+.+|. + .....|
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKID 81 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3578999997 99999999999999 9999999998766554432 2355555664 1 245899
Q ss_pred EEEEccCCCCCC--------C-----hHHHHH-------HH----H--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL--------D-----YPGDVR-------LA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 145 ~Vi~~a~~~~~~--------~-----~~~~~~-------~~----~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
++||+|+..... + |.+.+. .+ + ..+. ..++|++||...+...
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------- 149 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPN----------- 149 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSS-----------
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCC-----------
Confidence 999999863210 1 111110 11 1 1122 3799999997654321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc----C----ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~----~----~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + ...+.||.+..+
T Consensus 150 ~~~--~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~ 190 (281)
T 3zv4_A 150 GGG--PLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTD 190 (281)
T ss_dssp SSC--HHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC-
T ss_pred CCC--chhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCC
Confidence 112 57999999988777654 2 578899998765
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.2e-08 Score=85.21 Aligned_cols=134 Identities=10% Similarity=0.091 Sum_probs=89.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--CceeeccCc--------------cccCCCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT--------------EATQKFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~i~~~~~D~--------------~~~~~~D~Vi 147 (268)
|+|||||+ +-||+.++++|+++ |++|.+.+|++++..++.+. ++..+.+|. +.+...|++|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 67999996 99999999999999 99999999987766555443 344455554 1357899999
Q ss_pred EccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
|+|+...... |.+.+ +.++ +.+. ..++|.+||...+... |. ...|
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~------------~~-~~~Y 146 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSE------------PD-SEAY 146 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCC------------TT-CHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCC------------CC-CHHH
Confidence 9998654321 21111 1111 1233 3799999997643211 11 1579
Q ss_pred HHHHHHHHHHHHHc----C----ceEEEeCceecCC
Q 024417 207 TDVLLKAEKVILEF----G----GCVLRLAGLYKAD 234 (268)
Q Consensus 207 ~~sK~~aE~~l~~~----~----~tIlRp~~vyG~~ 234 (268)
+.+|...+.+-+.. + +..+-||.+--+.
T Consensus 147 ~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~ 182 (247)
T 3ged_A 147 ASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTE 182 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCC
Confidence 99998777655433 2 5778899886543
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-08 Score=88.13 Aligned_cols=133 Identities=11% Similarity=-0.047 Sum_probs=85.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHh---cCCCCeEEEEeCCCCcchhhh----c----CCceeeccCc---c--------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELI----N----MGITPSLKWT---E--------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~---~~~G~~V~~~~R~~~~~~~l~----~----~~i~~~~~D~---~--------~~ 140 (268)
.+++||||+ |.||++++++|++ + |++|++++|++++.+.+. . ..+..+.+|. + ..
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 467999997 9999999999999 8 999999999866544322 1 1244555664 1 11
Q ss_pred -----CCCC--EEEEccCCCCC--------CC---hHHHH-------HHHH---H---Hhc--CCCeEEEEccCeeecCC
Q 024417 141 -----QKFP--YVIFCAPPSRS--------LD---YPGDV-------RLAA---L---SWN--GEGSFLFTSSSAIYDCS 187 (268)
Q Consensus 141 -----~~~D--~Vi~~a~~~~~--------~~---~~~~~-------~~~~---~---~~~--gvkr~V~~SS~~vYg~~ 187 (268)
...| +|||+|+.... .. +.+.+ ..+. . .+. +..++|++||...|...
T Consensus 84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 163 (259)
T 1oaa_A 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence 2578 99999986321 11 11111 1111 1 122 34679999998765321
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-------ceEEEeCcee
Q 024417 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-------GCVLRLAGLY 231 (268)
Q Consensus 188 ~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~-------~tIlRp~~vy 231 (268)
.+. ..|+.+|...|.+.+.+. ...+.||.+-
T Consensus 164 -----------~~~--~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 164 -----------KGW--GLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp -----------TTC--HHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred -----------CCc--cHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 122 589999999988776542 4677888774
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=2.2e-08 Score=89.97 Aligned_cols=133 Identities=17% Similarity=0.139 Sum_probs=84.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC---------CCcchh----hhcCCce--eeccCcc-------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---------ADHHDE----LINMGIT--PSLKWTE------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~---------~~~~~~----l~~~~i~--~~~~D~~------- 138 (268)
+..+++||||+ |.||++++++|+++ |++|++.+|. .++.+. +...+.. ....|.+
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence 34578999997 99999999999999 9999997653 322221 2222211 1122221
Q ss_pred ----ccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCe-eecCCCCCCC
Q 024417 139 ----ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSA-IYDCSDNGAC 192 (268)
Q Consensus 139 ----~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~-vYg~~~~~~~ 192 (268)
....+|+|||+|+...... +...+ +.++ .++.+..+||++||.. .|+..
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~----- 159 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF----- 159 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-----
Confidence 2458999999998643211 11111 1111 1344678999999964 45421
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCce
Q 024417 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (268)
Q Consensus 193 ~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~v 230 (268)
+. ..|+.+|...+.+.+.+ + +.+++||.+
T Consensus 160 -------~~--~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 160 -------GQ--ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp -------TC--HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred -------CC--HHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 12 58999999988776543 3 588999986
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.77 E-value=2.9e-08 Score=86.47 Aligned_cols=134 Identities=13% Similarity=-0.012 Sum_probs=85.6
Q ss_pred CCeEEEEc---ccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhc---CCceeeccCc---c-----------ccC-
Q 024417 84 ENDLLIVG---PGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN---MGITPSLKWT---E-----------ATQ- 141 (268)
Q Consensus 84 m~kVLI~G---aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~---~~i~~~~~D~---~-----------~~~- 141 (268)
.+++|||| +|.||++++++|+++ |++|++++|+.++ .+.+.. ..+..+.+|. + ...
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46899998 489999999999999 9999999998654 233321 1344555554 1 123
Q ss_pred --CCCEEEEccCCCC-----CCC--------hHHHHH-------HHHH---Hh-cCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 142 --KFPYVIFCAPPSR-----SLD--------YPGDVR-------LAAL---SW-NGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 142 --~~D~Vi~~a~~~~-----~~~--------~~~~~~-------~~~~---~~-~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
.+|+|||+|+... ... +.+.+. .+.. .. ....++|++||...++.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~--------- 155 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM--------- 155 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC---------
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc---------
Confidence 8999999998643 111 111111 1110 10 11258999998654321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
... ..|+.+|...|.+.+.+ + +..++||.+..+
T Consensus 156 ---~~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 ---PAY--NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp ---TTT--HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ---Cch--HHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 112 57999999888776543 2 689999988643
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.76 E-value=1.7e-08 Score=87.90 Aligned_cols=136 Identities=14% Similarity=0.055 Sum_probs=82.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---h----hhcCC--ceeeccCc---c-----------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---E----LINMG--ITPSLKWT---E----------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---~----l~~~~--i~~~~~D~---~----------- 138 (268)
..+++||||+ |.||++++++|+++ |++|++++|.....+ . +...+ +..+.+|. +
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3578999997 99999999999999 999999988643322 1 22222 44455554 1
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHHHHH-HH------HH---H-hcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSLD--------YPGDVR-LA------AL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~~------~~---~-~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
....+|++||+|+...... +.+.+. |+ .. . ..+..++|++||...+....
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------- 156 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG----------- 156 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------
Confidence 2358999999999643221 111111 11 10 1 12346899999987664321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ..|+.+|...+.+.+.+ + ...++||.+..+
T Consensus 157 ~~--~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 157 FY--STYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp CC--CC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred CC--chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 11 46888898887766543 2 588899988643
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.69 E-value=3.1e-07 Score=79.46 Aligned_cols=136 Identities=18% Similarity=0.116 Sum_probs=92.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc----------cccCCCCEEEEcc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----------EATQKFPYVIFCA 150 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~----------~~~~~~D~Vi~~a 150 (268)
+..|++||||+ +-||+.++++|.++ |++|.+.+|+.+..+......+..+.+|. +.+...|++||+|
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNA 86 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNA 86 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence 34578999997 99999999999999 99999999998776554444555666664 2467999999999
Q ss_pred CCCCCC-C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 024417 151 PPSRSL-D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (268)
Q Consensus 151 ~~~~~~-~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~ 211 (268)
+..... + |.+.+ +.++ .++.+ .++|.+||..-+-.. |. ...|+.+|.
T Consensus 87 Gi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~------------~~-~~~Y~asKa 152 (242)
T 4b79_A 87 GISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGS------------AD-RPAYSASKG 152 (242)
T ss_dssp CCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCC------------SS-CHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCC------------CC-CHHHHHHHH
Confidence 865321 1 21111 1111 12333 789999997542211 11 157999998
Q ss_pred HHHHHHHHc-------C--ceEEEeCceecC
Q 024417 212 KAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 212 ~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..+.+-+.. + +..+-||.+.-|
T Consensus 153 av~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 183 (242)
T 4b79_A 153 AIVQLTRSLACEYAAERIRVNAIAPGWIDTP 183 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCC
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEeCCCCCh
Confidence 877665543 2 578889988655
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.65 E-value=1.1e-07 Score=74.71 Aligned_cols=67 Identities=10% Similarity=0.223 Sum_probs=56.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~ 151 (268)
.|++|+|+|+|.+|+.+++.|.++ |++|+++++++++.+.+...++..+.+|. + ...++|+||.+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 367999999999999999999999 99999999998887777777887777765 1 2568999998877
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=8.2e-08 Score=74.78 Aligned_cols=97 Identities=10% Similarity=0.171 Sum_probs=66.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c----c-cCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E----A-TQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~----~-~~~~D~Vi~~a~~~~ 154 (268)
.|++|+|+|+|.+|+.+++.|.+. |++|++++|++++.+.+...+...+.+|. + . +.++|+||++++...
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 467899999999999999999999 99999999987666555555555555543 1 2 568999999987631
Q ss_pred CCChHHHHHHHHHHhcCCCeEEEEccCeee
Q 024417 155 SLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 155 ~~~~~~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
. ....+... .+..+++++|..++...|
T Consensus 83 ~--~~~~~~~~-~~~~~~~~ii~~~~~~~~ 109 (144)
T 2hmt_A 83 Q--ASTLTTLL-LKELDIPNIWVKAQNYYH 109 (144)
T ss_dssp H--HHHHHHHH-HHHTTCSEEEEECCSHHH
T ss_pred H--HHHHHHHH-HHHcCCCeEEEEeCCHHH
Confidence 0 00011111 245677788877765544
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.60 E-value=4.9e-07 Score=85.09 Aligned_cols=136 Identities=10% Similarity=0.019 Sum_probs=87.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chh-hhcCCceeeccCc---c-----------ccCC-C
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDE-LINMGITPSLKWT---E-----------ATQK-F 143 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~-l~~~~i~~~~~D~---~-----------~~~~-~ 143 (268)
..+++||||+ |.||+.++++|.++ |++|++++|+... ... ....+++.+.+|. + ...+ .
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence 4578999996 99999999999999 9999999986432 111 2223555666654 1 1234 9
Q ss_pred CEEEEccCCCCCCC--------hHHH-------HHHHH---H---HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~-------~~~~~---~---~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|+|||+|+...... +.+. ..++. . ...+..+||++||...+-... .
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-----------g-- 356 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-----------G-- 356 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-----------T--
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-----------C--
Confidence 99999999754321 1111 11111 1 112567999999976543211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|+.+|...+.+.+.+ + ...+.||.+..+
T Consensus 357 ~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~ 396 (454)
T 3u0b_A 357 QTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETK 396 (454)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccCh
Confidence 268999999776655433 2 588999999765
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.55 E-value=2.9e-07 Score=71.39 Aligned_cols=90 Identities=12% Similarity=0.017 Sum_probs=62.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-----ccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-----~~~~~D~Vi~~a~~~~ 154 (268)
.|+|+|+|+|.+|+.+++.|.+. |++|++++|++++.+.+.. .++..+.+|. + .+.++|+||++.+...
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 81 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE 81 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence 36899999999999999999999 9999999998776655543 3666555553 1 2678999999976421
Q ss_pred CCChHHHHHHHHHHhcCCCeEEEEc
Q 024417 155 SLDYPGDVRLAALSWNGEGSFLFTS 179 (268)
Q Consensus 155 ~~~~~~~~~~~~~~~~gvkr~V~~S 179 (268)
....+... .+..+++++|...
T Consensus 82 ---~~~~~~~~-~~~~~~~~ii~~~ 102 (140)
T 1lss_A 82 ---VNLMSSLL-AKSYGINKTIARI 102 (140)
T ss_dssp ---HHHHHHHH-HHHTTCCCEEEEC
T ss_pred ---HHHHHHHH-HHHcCCCEEEEEe
Confidence 11111122 2445667777644
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.53 E-value=8.9e-07 Score=77.16 Aligned_cols=136 Identities=16% Similarity=0.095 Sum_probs=90.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc--------------cccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~--------------~~~~ 141 (268)
..|.+||||+ +-||+.++++|.++ |++|.+.+|++++.++ +...+ +..+.+|. +...
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 3578999997 99999999999999 9999999998765433 33333 33445553 1356
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..|++||+|+...... |.+.+ +.++ .++.+..++|.+||..-+...
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~------------ 153 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR------------ 153 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC------------
Confidence 8999999998654321 21111 1111 123456799999997643211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + +..+-||.+.-+
T Consensus 154 ~~-~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 195 (255)
T 4g81_D 154 PT-VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTD 195 (255)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred CC-chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 11 157999998877665543 2 578889988754
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=1.5e-06 Score=75.95 Aligned_cols=132 Identities=10% Similarity=-0.002 Sum_probs=83.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------------cccCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------------EATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------------~~~~~~D~Vi~ 148 (268)
.|++||||+ +-||+.++++|.++ |++|++.+|+.++. +. ....+.+|. +.+...|++||
T Consensus 11 GK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~--~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn 84 (261)
T 4h15_A 11 GKRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPEG--LP--EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVH 84 (261)
T ss_dssp TCEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCTT--SC--TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred CCEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchhC--CC--cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999997 99999999999999 99999999975431 11 111233332 13568999999
Q ss_pred ccCCCCC--C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 149 CAPPSRS--L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 149 ~a~~~~~--~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
+|+.... . + |.+.+ +.++ ..+.+-.++|++||..-+-. .|.....
T Consensus 85 nAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~------------~~~~~~~ 152 (261)
T 4h15_A 85 MLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLP------------LPESTTA 152 (261)
T ss_dssp CCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC------------CTTTCHH
T ss_pred CCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccC------------CCCccHH
Confidence 9985321 1 1 21111 1111 13456679999999753211 0111257
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|+.+|...+.+.+.. + +..+-||.+--+
T Consensus 153 Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~ 189 (261)
T 4h15_A 153 YAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETE 189 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc
Confidence 999998887665543 2 577889988543
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=7.5e-07 Score=84.75 Aligned_cols=134 Identities=16% Similarity=0.169 Sum_probs=87.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCc---ch----hhhcCC--ceeeccCc---c----c---c---
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---HD----ELINMG--ITPSLKWT---E----A---T--- 140 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~---~~----~l~~~~--i~~~~~D~---~----~---~--- 140 (268)
+++||||+ |.||.+++++|.++ |+ .|+.+.|+... .. ++...+ +..+.+|. + . +
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 68999996 99999999999999 98 78888886322 22 233334 44455664 1 1 1
Q ss_pred CCCCEEEEccCCC-CCC---C-----h-------HHHHHHHH--HHhcCCCeEEEEccCe-eecCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPS-RSL---D-----Y-------PGDVRLAA--LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 141 ~~~D~Vi~~a~~~-~~~---~-----~-------~~~~~~~~--~~~~gvkr~V~~SS~~-vYg~~~~~~~~E~~~~~p~ 201 (268)
...|+|||+|+.. ... + + +.+..++. .......+||++||.. ++|..
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~-------------- 383 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSG-------------- 383 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCT--------------
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCC--------------
Confidence 3689999999965 221 1 1 11222222 1234678999999965 33421
Q ss_pred CCCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~ 234 (268)
+...|+.+|...+.+.++. + ++.+.||.+.+.+
T Consensus 384 g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 384 GQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSC
T ss_pred CcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCc
Confidence 1257999998887766543 3 7899999887654
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=6.9e-07 Score=71.38 Aligned_cols=96 Identities=14% Similarity=0.031 Sum_probs=66.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc---c----c-cCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E----A-TQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~---~----~-~~~~D~Vi~~a~~~ 153 (268)
..++|+|+|+|.+|+.+++.|.+. |++|++++|++++.+.+. ..+...+.+|. + . +.++|+||.+.+..
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~ 95 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD 95 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence 356899999999999999999999 999999999988877665 55666655553 1 2 56899999988753
Q ss_pred CCCChHHHHHHHHHHhcCCCeEEEEccCee
Q 024417 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSAI 183 (268)
Q Consensus 154 ~~~~~~~~~~~~~~~~~gvkr~V~~SS~~v 183 (268)
. ....+..++....+..++|...+...
T Consensus 96 ~---~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 96 S---TNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp H---HHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred H---HHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 1 11122222222256677777665433
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.7e-06 Score=75.31 Aligned_cols=136 Identities=14% Similarity=0.132 Sum_probs=89.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc--------------cccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~--------------~~~~ 141 (268)
..|.+||||+ +-||+.++++|.++ |.+|.+.+|++++.++ ++..+ +..+.+|. +...
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 9999999998766543 33333 33445554 1357
Q ss_pred CCCEEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..|++||+|+.... . + |.+.+ +.++ +.+++-.++|.+||..-+-..
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~------------ 151 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG------------ 151 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS------------
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC------------
Confidence 89999999985321 1 1 21111 1111 134556799999997632211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+-+.. + +..+-||.+--+
T Consensus 152 ~~-~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 152 FA-GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN 193 (254)
T ss_dssp SS-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred CC-ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence 11 157999998877665543 2 578889988644
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.44 E-value=1.7e-06 Score=74.92 Aligned_cols=136 Identities=10% Similarity=-0.094 Sum_probs=86.6
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c---CCceeeccCc--------------c
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MGITPSLKWT--------------E 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~---~~i~~~~~D~--------------~ 138 (268)
..|++||||+ | -||+.++++|.++ |++|++.+|+++..+++. + ..+..+.+|. +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 3578999996 6 7999999999999 999999999876554332 2 1344555653 1
Q ss_pred ccCCCCEEEEccCCCCCC-------C-hHHHHH---HH--H---------H-HhcCCCeEEEEccCeeecCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSL-------D-YPGDVR---LA--A---------L-SWNGEGSFLFTSSSAIYDCSDNGACDED 195 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~-------~-~~~~~~---~~--~---------~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~ 195 (268)
.....|++||+|+..... + ..+... ++ . . ....-.++|.+||..-.-.
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~--------- 153 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA--------- 153 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC---------
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC---------
Confidence 356899999999854211 1 111111 11 0 0 1122358999998653211
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 154 ---~~~-~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 196 (256)
T 4fs3_A 154 ---VQN-YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTL 196 (256)
T ss_dssp ---CTT-THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSG
T ss_pred ---ccc-chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCCh
Confidence 011 157999998877665543 2 578899988654
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=6.3e-06 Score=71.82 Aligned_cols=135 Identities=12% Similarity=0.022 Sum_probs=88.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh---hcC--CceeeccCc--------------cccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---INM--GITPSLKWT--------------EATQK 142 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l---~~~--~i~~~~~D~--------------~~~~~ 142 (268)
..|.+||||+ +-||+.++++|.++ |.+|.+.+|+.+..+.+ .+. .+..+.+|. +.+..
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 3578999997 99999999999999 99999999987654322 222 344455553 13568
Q ss_pred CCEEEEccCCCCCC--C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSL--D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~--~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
.|++||+|+..... + |.+.+ +..+ +++. -.++|.+||..-+... |.
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~------------~~- 149 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQ------------GN- 149 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCC------------SS-
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCC------------CC-
Confidence 99999999864321 1 22111 1111 1222 3789999997654321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|+.+|...+.+.+.. + +..+-||.+--+
T Consensus 150 ~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 189 (258)
T 4gkb_A 150 TSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTP 189 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCS
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCh
Confidence 157999998887665543 2 578889988654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.36 E-value=1.6e-06 Score=76.26 Aligned_cols=137 Identities=15% Similarity=0.108 Sum_probs=87.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cC--CceeeccCc--------------cccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NM--GITPSLKWT--------------EATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~--~i~~~~~D~--------------~~~~~~ 143 (268)
+..|.+||||+ +-||+.++++|.++ |++|.+.+|+.++.++.. +. ....+.+|. +.....
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 44577999997 89999999999999 999999999877655432 21 234445553 135689
Q ss_pred CEEEEccCCCCCC---C-----hHHHHH-HH------HH----HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSL---D-----YPGDVR-LA------AL----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~~-~~------~~----~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|++|++|+..... + |.+.+. |+ .. ....-.++|.+||..-+-.. |. ..
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~------------~~-~~ 171 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT------------PA-FS 171 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC------------TT-CH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC------------CC-ch
Confidence 9999999864321 1 222111 11 00 01112479999987543211 11 15
Q ss_pred HHHHHHHHHHHHHHHc----C-----ceEEEeCceecC
Q 024417 205 PRTDVLLKAEKVILEF----G-----GCVLRLAGLYKA 233 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~----~-----~tIlRp~~vyG~ 233 (268)
.|+.+|...+.+.+.. + +..+-||.+.-+
T Consensus 172 ~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~ 209 (273)
T 4fgs_A 172 VYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETT 209 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC-
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 7999998887665543 2 577889988654
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.36 E-value=8.2e-07 Score=69.85 Aligned_cols=68 Identities=24% Similarity=0.306 Sum_probs=57.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~~ 153 (268)
+++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+...++..+.+|. + .+.++|+||.+.+..
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 46899999999999999999999 99999999999888877778888887774 1 256899999877653
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.35 E-value=2e-06 Score=83.87 Aligned_cols=134 Identities=13% Similarity=0.032 Sum_probs=76.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeC---------CCCcchh----hhcCCcee--eccCcc------
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM---------TADHHDE----LINMGITP--SLKWTE------ 138 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R---------~~~~~~~----l~~~~i~~--~~~D~~------ 138 (268)
.+..+.+||||+ |.||++++++|+++ |++|++++| +.+..+. +...+... ...|.+
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~ 93 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAER--GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVI 93 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHH
Confidence 345578999997 99999999999999 999999987 3333322 22222222 122221
Q ss_pred -----ccCCCCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhcCCCeEEEEccCeee-cCCCCCC
Q 024417 139 -----ATQKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIY-DCSDNGA 191 (268)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~~~------~~~~gvkr~V~~SS~~vY-g~~~~~~ 191 (268)
....+|++||+|+..... + +...+ ..+. +++.+..++|++||...+ +..
T Consensus 94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~---- 169 (613)
T 3oml_A 94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF---- 169 (613)
T ss_dssp C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT----
T ss_pred HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC----
Confidence 234799999999964321 1 11111 1111 134556799999997543 321
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCce
Q 024417 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (268)
Q Consensus 192 ~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~v 230 (268)
.. ..|+.+|...+.+.+.+ + ...+.|+.+
T Consensus 170 --------~~--~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 170 --------GQ--VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp --------TC--HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred --------CC--hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 12 57999999888776543 2 577888754
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=3.5e-06 Score=74.11 Aligned_cols=33 Identities=24% Similarity=0.256 Sum_probs=29.2
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.+++||||+ |.||++++++|+++ |++|++++|+
T Consensus 8 ~k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~ 43 (297)
T 1d7o_A 8 GKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWV 43 (297)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeecc
Confidence 468999995 79999999999999 9999998753
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.33 E-value=7.5e-06 Score=78.35 Aligned_cols=132 Identities=14% Similarity=0.078 Sum_probs=82.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEE-eCCC-------------Ccch----hhhcCC--ceeeccCc---c
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQ-TMTA-------------DHHD----ELINMG--ITPSLKWT---E 138 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~-~R~~-------------~~~~----~l~~~~--i~~~~~D~---~ 138 (268)
.+++||||+ |.||.+++++|.++ |++ |+.+ .|+. +..+ ++...+ +..+.+|. +
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~ 328 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE 328 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence 467999996 99999999999999 997 5555 7763 2222 233333 44455664 1
Q ss_pred ----c------cCCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhcC-CCeEEEEccCeeecC
Q 024417 139 ----A------TQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNG-EGSFLFTSSSAIYDC 186 (268)
Q Consensus 139 ----~------~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~~~---~---~~~g-vkr~V~~SS~~vYg~ 186 (268)
. ....|+|||+|+...... +.+ +..++. . ++.+ ..+||++||...+-.
T Consensus 329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g 408 (525)
T 3qp9_A 329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWG 408 (525)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTC
T ss_pred HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCC
Confidence 1 246899999999653211 111 111221 1 1122 679999999754321
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-----ceEEEeCce
Q 024417 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-----GCVLRLAGL 230 (268)
Q Consensus 187 ~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~-----~tIlRp~~v 230 (268)
. + +...|+.+|...+.+..+.. ++.+.||.+
T Consensus 409 ~------------~-g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 409 G------------A-GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp C------------T-TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred C------------C-CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 1 1 12689999999888876653 688999988
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.6e-06 Score=78.14 Aligned_cols=96 Identities=16% Similarity=0.124 Sum_probs=62.4
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcc--hhhhcCC----ceeecc--Cc-cccCCCCEEEEccC
Q 024417 84 ENDLLIVG-PGVLGRLVAEQWRQEHPG--CQIYGQTMTADHH--DELINMG----ITPSLK--WT-EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~G-aG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~--~~l~~~~----i~~~~~--D~-~~~~~~D~Vi~~a~ 151 (268)
+|||+|+| +|++|..++..|+++ | ++|+++++++++. ..+.... +..+.. |. ++++++|+|||+++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence 46999999 599999999999998 7 8999999876521 1122211 111112 33 47899999999998
Q ss_pred CCCCC-----Ch----HHHHHHHH--HHhcCCCeEEEEccC
Q 024417 152 PSRSL-----DY----PGDVRLAA--LSWNGEGSFLFTSSS 181 (268)
Q Consensus 152 ~~~~~-----~~----~~~~~~~~--~~~~gvkr~V~~SS~ 181 (268)
..... ++ ...+++++ ..+.+++.+|+.+|-
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 54321 11 23344444 234567778888763
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.27 E-value=2.5e-05 Score=67.59 Aligned_cols=137 Identities=15% Similarity=0.092 Sum_probs=88.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcCC--ceeeccCc---c------ccCCCCEEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG--ITPSLKWT---E------ATQKFPYVI 147 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~~--i~~~~~D~---~------~~~~~D~Vi 147 (268)
+..|.+||||+ +-||+.++++|.++ |.+|.+.+|+.++ .+.+...+ +..+.+|. + .....|++|
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 44578999997 99999999999999 9999999997543 23344444 33444553 1 234799999
Q ss_pred EccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 148 FCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
|+|+...... |.+.+ +.++ ..+.+ -.++|.+||..-+-.. |. ...
T Consensus 85 NNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------------~~-~~~ 151 (247)
T 4hp8_A 85 NNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------------IR-VPS 151 (247)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------SS-CHH
T ss_pred ECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC------------CC-ChH
Confidence 9998654321 21111 1111 12233 4689999997543211 11 157
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|+.+|.....+-+.. + +..+-||.+--+
T Consensus 152 Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~ 188 (247)
T 4hp8_A 152 YTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETN 188 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSG
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCc
Confidence 999998877665543 2 577889988654
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.17 E-value=4.9e-06 Score=66.15 Aligned_cols=67 Identities=10% Similarity=0.081 Sum_probs=52.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC-Ccchhhh---cCCceeeccCc-------c-ccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI---NMGITPSLKWT-------E-ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~-~~~~~l~---~~~i~~~~~D~-------~-~~~~~D~Vi~~a~ 151 (268)
.++|+|+|+|.+|+.+++.|.+. |++|+++++++ ++.+.+. ..+++.+.+|. + .+.++|+||.+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecC
Confidence 46899999999999999999999 99999999974 3333332 34677777764 1 3789999998876
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 81 ~ 81 (153)
T 1id1_A 81 N 81 (153)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.15 E-value=6.1e-06 Score=69.50 Aligned_cols=89 Identities=11% Similarity=0.007 Sum_probs=63.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-----ccCCCCEEEEccCCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-----~~~~~D~Vi~~a~~~~~ 155 (268)
|+|+|+|+|.+|+.+++.|.++ |++|+++++++++.+.+.. .++..+.+|. + .+.++|+||.+.+...
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~- 77 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE- 77 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH-
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH-
Confidence 5799999999999999999999 9999999999887766543 4777777774 1 3679999997765431
Q ss_pred CChHHHHHHHHHH-hcCCCeEEEEc
Q 024417 156 LDYPGDVRLAALS-WNGEGSFLFTS 179 (268)
Q Consensus 156 ~~~~~~~~~~~~~-~~gvkr~V~~S 179 (268)
........++ ..+..++|-..
T Consensus 78 ---~n~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 78 ---VNLFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp ---HHHHHHHHHHHTSCCCEEEECC
T ss_pred ---HHHHHHHHHHHHcCCCeEEEEE
Confidence 1111111123 35777777544
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.14 E-value=2.2e-06 Score=76.44 Aligned_cols=70 Identities=20% Similarity=0.298 Sum_probs=56.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 80 GGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 80 ~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
....||+|.|+|+|.+|..+++.|++. |++|++.+|++++.+.+...++... .+. +.+.++|+||.+.+.
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~~~-~~~~~~~~~aDvvi~~vp~ 87 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEHGASVC-ESPAEVIKKCKYTIAMLSD 87 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred ccccCCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCeEc-CCHHHHHHhCCEEEEEcCC
Confidence 344578999999999999999999999 9999999999988877776676543 233 567789999988764
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.14 E-value=1.3e-05 Score=71.36 Aligned_cols=95 Identities=14% Similarity=0.067 Sum_probs=61.8
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCC--eEEEEeC--CCCcchh----hhc-----CCceeeccCccccCCCCEEEEcc
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGC--QIYGQTM--TADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCA 150 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~--~V~~~~R--~~~~~~~----l~~-----~~i~~~~~D~~~~~~~D~Vi~~a 150 (268)
|||+|+| +|++|.+++..|+.. ++ ++..+++ ++++.+. +.. ..++....|.++++++|+|||+|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcC
Confidence 5899999 699999999999887 65 7888888 5433211 111 12222224556899999999999
Q ss_pred CCCCCC-C----h----HHHHHHHH--HHhcCCCeEEEEccC
Q 024417 151 PPSRSL-D----Y----PGDVRLAA--LSWNGEGSFLFTSSS 181 (268)
Q Consensus 151 ~~~~~~-~----~----~~~~~~~~--~~~~gvkr~V~~SS~ 181 (268)
+..... . + ...+++++ .++.+.+.+|+++|-
T Consensus 79 g~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 79 GIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 864321 1 1 22334443 245577888888764
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.14 E-value=1.6e-06 Score=73.46 Aligned_cols=70 Identities=14% Similarity=0.200 Sum_probs=55.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEE-EeCCCCcchhhhc-CCceeeccCccccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~-~~R~~~~~~~l~~-~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
++||||.|+|+|.+|..+++.|.+. |++|++ .+|++++.+.+.. .++.....+.+.+.++|+||.+.++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~~ 92 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPYD 92 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCGG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCChH
Confidence 3478999999999999999999999 999999 8898887766543 35544444445688999999988653
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=9.2e-06 Score=72.65 Aligned_cols=95 Identities=13% Similarity=0.060 Sum_probs=60.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeC--CCCcchh----hhc----C--CceeeccC---ccccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTM--TADHHDE----LIN----M--GITPSLKW---TEATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R--~~~~~~~----l~~----~--~i~~~~~D---~~~~~~~D~V 146 (268)
|||+|+|+ |++|++++..|+.+ ++ ++..+++ ++++.+. +.. . .++....+ .++++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhC--CCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEE
Confidence 48999998 99999999999988 64 6888887 5432211 111 1 12222222 4689999999
Q ss_pred EEccCCCCC-CC--------hHHHHHHHH--HHhcCCCeEEEEccCe
Q 024417 147 IFCAPPSRS-LD--------YPGDVRLAA--LSWNGEGSFLFTSSSA 182 (268)
Q Consensus 147 i~~a~~~~~-~~--------~~~~~~~~~--~~~~gvkr~V~~SS~~ 182 (268)
||+|+.... .. ....+++++ .++.+ +.+|+.+|--
T Consensus 79 i~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNP 124 (313)
T 1hye_A 79 IITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNP 124 (313)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSS
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCc
Confidence 999985432 11 122333443 24556 7788887743
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.11 E-value=2.9e-06 Score=79.74 Aligned_cols=69 Identities=19% Similarity=0.198 Sum_probs=52.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC--CceeeccCc-------cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~--~i~~~~~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
.|++|+|+|+|++|+++++.|++. |++|++.+|+.++.+.+... ++..+..|. +.+.++|+||||++..
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 367899999999999999999998 99999999987665554321 244444442 2467999999999864
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.7e-06 Score=71.86 Aligned_cols=67 Identities=13% Similarity=0.175 Sum_probs=54.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...+++.. +. +.+.++|+||.+.++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~--~~~~~~~~~DvVi~av~~~~ 95 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPSAAQVT--FQEEAVSSPEVIFVAVFREH 95 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBTTSEEE--EHHHHTTSCSEEEECSCGGG
T ss_pred CCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcee--cHHHHHhCCCEEEECCChHH
Confidence 57899999999999999999999 9999999998777666655566543 43 46789999999988643
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=2.9e-05 Score=68.96 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=29.6
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.+++||||+ |.||++++++|+++ |++|++++|+
T Consensus 9 gk~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (315)
T 2o2s_A 9 GQTAFVAGVADSHGYGWAIAKHLASA--GARVALGTWP 44 (315)
T ss_dssp TCEEEEECCSSSSSHHHHHHHHHHTT--TCEEEEEECH
T ss_pred CCEEEEeCCCCCCChHHHHHHHHHHC--CCEEEEEecc
Confidence 467999985 89999999999999 9999999874
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.08 E-value=4.5e-06 Score=74.70 Aligned_cols=67 Identities=16% Similarity=0.185 Sum_probs=56.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
.+|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .+. +.+.++|+||.+.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~~~-~~~~e~~~~aDvVi~~vp~ 97 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAALGATIH-EQARAAARDADIVVSMLEN 97 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTTCEEE-SSHHHHHTTCSEEEECCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHCCCEee-CCHHHHHhcCCEEEEECCC
Confidence 367999999999999999999999 9999999999888777766676543 233 578899999988864
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.04 E-value=1e-05 Score=72.80 Aligned_cols=95 Identities=6% Similarity=0.001 Sum_probs=59.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCC----CCcch----hhhcC--Ccee--e-ccCc-cccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMT----ADHHD----ELINM--GITP--S-LKWT-EATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~----~~~~~----~l~~~--~i~~--~-~~D~-~~~~ 141 (268)
.+||+|+|+ |+||++++..|+.. |+ +|+.++++ .++.+ .+... .... . ..|. ++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 358999997 99999999999988 75 89999887 33222 12221 1111 1 1232 5789
Q ss_pred CCCEEEEccCCCCC-CC----h----HHHHHHHH--HHhc-CCC-eEEEEcc
Q 024417 142 KFPYVIFCAPPSRS-LD----Y----PGDVRLAA--LSWN-GEG-SFLFTSS 180 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~-~~----~----~~~~~~~~--~~~~-gvk-r~V~~SS 180 (268)
++|+|||+|+.... +. + ...+++++ .++. +.+ +||++|.
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999999986542 11 1 12233333 1344 355 8888885
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=98.04 E-value=2.5e-06 Score=74.96 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=55.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
|++|.|+|+|.+|..+++.|++. |++|++.+|++++.+.+...++... .|. +.++++|+||.+.+.
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~~~~advvi~~v~~ 67 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVALGARQA-SSPAEVCAACDITIAMLAD 67 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHHTCEEC-SCHHHHHHHCSEEEECCSS
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeec-CCHHHHHHcCCEEEEEcCC
Confidence 67999999999999999999999 9999999999988877766666543 233 467789999988875
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.03 E-value=7.1e-06 Score=72.73 Aligned_cols=67 Identities=16% Similarity=0.205 Sum_probs=56.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...|......+. +.++++|+||.+.+.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~ 74 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVN 74 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCC
Confidence 46899999999999999999999 99999999998887777766765523344 577899999998875
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.03 E-value=2e-05 Score=73.92 Aligned_cols=66 Identities=15% Similarity=0.192 Sum_probs=51.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce--------------------eeccCc-cccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT--------------------PSLKWT-EATQKF 143 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~--------------------~~~~D~-~~~~~~ 143 (268)
|||.|+|+|++|..++..|.+. |++|++++|++++.+.+.. +.. ....|. ++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 6999999999999999999999 9999999999877666543 111 111233 357899
Q ss_pred CEEEEccCCC
Q 024417 144 PYVIFCAPPS 153 (268)
Q Consensus 144 D~Vi~~a~~~ 153 (268)
|+||.|.+..
T Consensus 80 DvViiaVptp 89 (450)
T 3gg2_A 80 DIIFIAVGTP 89 (450)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEEcCCC
Confidence 9999999754
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.03 E-value=9.6e-06 Score=66.24 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=54.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cc--cCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EA--TQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~--~~~~D~Vi~~a~~ 152 (268)
.++|+|+|+|.+|+.+++.|.+.. |++|+++++++++.+.+...+++.+.+|. ++ +.++|+||.+.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 468999999999999999998731 78999999998887777767877776653 13 6789999987764
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=98.02 E-value=7.9e-06 Score=72.90 Aligned_cols=70 Identities=13% Similarity=0.164 Sum_probs=53.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCC--CcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA--DHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~--~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
.||+|.|+|+|.+|..+++.|++. |+ +|++.+|++ ++.+.+...++.......+.++++|+||.+.++..
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQA 95 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTT
T ss_pred CCCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchh
Confidence 367999999999999999999999 99 999999973 55555555666543222256788999999888754
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=2.5e-05 Score=69.80 Aligned_cols=70 Identities=23% Similarity=0.461 Sum_probs=55.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCce-eeccCc-c-ccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGIT-PSLKWT-E-ATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~-~~~~D~-~-~~~~~D~Vi~~a~~~~ 154 (268)
++++|.|+|+|.+|..+++.|++. |+ +|++.+|++++.+.....|+. ....|. + .+.++|+||.+.++..
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~~ 106 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRT 106 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGGG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHHH
Confidence 357999999999999999999999 99 999999998776666555652 122344 4 6889999999988753
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.00 E-value=7.5e-06 Score=72.08 Aligned_cols=69 Identities=14% Similarity=0.204 Sum_probs=51.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-----------cCc-cc---cCCCCEEE
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-----------KWT-EA---TQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-----------~D~-~~---~~~~D~Vi 147 (268)
+||||.|+|+|.+|..++..|.+. |++|++++|++++.+.+.+.++.... .+. +. +.++|+||
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence 467999999999999999999999 99999999988776666554543321 011 22 34899999
Q ss_pred EccCCC
Q 024417 148 FCAPPS 153 (268)
Q Consensus 148 ~~a~~~ 153 (268)
.+.++.
T Consensus 80 ~~v~~~ 85 (316)
T 2ew2_A 80 ALTKAQ 85 (316)
T ss_dssp ECSCHH
T ss_pred EEeccc
Confidence 988753
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.99 E-value=6.6e-06 Score=75.07 Aligned_cols=73 Identities=16% Similarity=0.207 Sum_probs=53.8
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCC---CEEEEccCCC
Q 024417 78 SSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKF---PYVIFCAPPS 153 (268)
Q Consensus 78 ~~~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~---D~Vi~~a~~~ 153 (268)
.|..+.+|+|.|+|+|.+|..+++.|++. |++|++.+|++++.+.+...++... .++ +.+.++ |+||.+.+..
T Consensus 16 ~~~Mm~~mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~-~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 16 ENLYFQSMQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALEREGIAGA-RSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTTCBCC-SSHHHHHHHSCSSCEEEECSCGG
T ss_pred chhhhcCCEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHCCCEEe-CCHHHHHhcCCCCCEEEEeCCHH
Confidence 34444568999999999999999999999 9999999999888777766665432 233 344444 9999988765
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=71.83 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=51.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCC-------cchhhhcCCceeecc-Cc-cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTAD-------HHDELINMGITPSLK-WT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~-------~~~~l~~~~i~~~~~-D~-~~~~~~D~Vi~~a~~ 152 (268)
+||+|.|+|+|.+|..+++.|++. | ++|++.+|+++ ..+.+...++ .. +. +.++++|+||.+.++
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~~s~~e~~~~aDvVi~avp~ 97 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAELGV---EPLDDVAGIACADVVLSLVVG 97 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EEESSGGGGGGCSEEEECCCG
T ss_pred cCCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHCCC---CCCCHHHHHhcCCEEEEecCC
Confidence 357999999999999999999999 9 99999999862 2233334455 22 33 577899999998876
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 98 ~ 98 (317)
T 4ezb_A 98 A 98 (317)
T ss_dssp G
T ss_pred H
Confidence 4
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.1e-05 Score=73.62 Aligned_cols=73 Identities=15% Similarity=0.118 Sum_probs=55.3
Q ss_pred CCCCCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee-------------------ccCc-
Q 024417 78 SSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-------------------LKWT- 137 (268)
Q Consensus 78 ~~~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~-------------------~~D~- 137 (268)
.|+...|.+|.|+|+||+|..++..|.+. |++|+++|.++++.+.+..-..... ..|.
T Consensus 15 ~p~~~~m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~ 92 (444)
T 3vtf_A 15 VPRGSHMASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAE 92 (444)
T ss_dssp CCTTCCCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHH
T ss_pred CCCCCCCCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHH
Confidence 35566789999999999999999999999 9999999999887766643111110 1122
Q ss_pred cccCCCCEEEEccCC
Q 024417 138 EATQKFPYVIFCAPP 152 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~ 152 (268)
+++.++|++|.|.+.
T Consensus 93 ~ai~~ad~~~I~VpT 107 (444)
T 3vtf_A 93 EAVAATDATFIAVGT 107 (444)
T ss_dssp HHHHTSSEEEECCCC
T ss_pred HHHhcCCceEEEecC
Confidence 357899999999874
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.98 E-value=7.6e-06 Score=74.53 Aligned_cols=67 Identities=22% Similarity=0.311 Sum_probs=50.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
+.|||+|+|+|++|+.+++.|.+ .++|++.+|+.++.+.+.. .+..+..|. +.++++|+||+|+++.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~-~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKE-FATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTT-TSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CccEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhc-cCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 34689999999999999999865 5899999998766655433 334444442 2578999999999875
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.97 E-value=1.8e-05 Score=69.92 Aligned_cols=65 Identities=12% Similarity=0.093 Sum_probs=54.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .|. +..+ +|+||.+.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEAGATLA-DSVADVAA-ADLIHITVLD 80 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHTTCEEC-SSHHHHTT-SSEEEECCSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCEEc-CCHHHHHh-CCEEEEECCC
Confidence 45899999999999999999999 9999999999998888777776543 343 4566 9999998874
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.96 E-value=1.1e-05 Score=70.85 Aligned_cols=69 Identities=14% Similarity=0.251 Sum_probs=56.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC---eEEEEeCCCCcchhhhcC-CceeeccCccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC---QIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~---~V~~~~R~~~~~~~l~~~-~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
++++|.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+.+... ++.....+.+.+.++|+||.+..+.
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p~ 74 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKPH 74 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCGG
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCHH
Confidence 357899999999999999999999 88 999999998887776553 6665433336788999999999664
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.95 E-value=2e-05 Score=70.15 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=29.4
Q ss_pred CCeEEEEcc---cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga---G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.+++||||+ |.||++++++|+++ |++|++++|+
T Consensus 9 ~k~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (319)
T 2ptg_A 9 GKTAFVAGVADSNGYGWAICKLLRAA--GARVLVGTWP 44 (319)
T ss_dssp TCEEEEECCCCTTSHHHHHHHHHHHT--TCEEEEEECH
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEEEecc
Confidence 467999994 89999999999999 9999999864
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.94 E-value=5.3e-06 Score=76.84 Aligned_cols=68 Identities=19% Similarity=0.153 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC---CeEEEEeCCCCcchhhhc-------CCceeeccCc-------cccCC--CC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELIN-------MGITPSLKWT-------EATQK--FP 144 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G---~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~-------~~~~~--~D 144 (268)
|++|+|+|+|+||+.+++.|.++ | .+|++.+|+.++.+.+.. ..+..+..|. +.+++ +|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 67999999999999999999998 6 399999998776554422 1355555553 13444 99
Q ss_pred EEEEccCCC
Q 024417 145 YVIFCAPPS 153 (268)
Q Consensus 145 ~Vi~~a~~~ 153 (268)
+|||++++.
T Consensus 79 vVin~ag~~ 87 (405)
T 4ina_A 79 IVLNIALPY 87 (405)
T ss_dssp EEEECSCGG
T ss_pred EEEECCCcc
Confidence 999999874
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.5e-05 Score=70.69 Aligned_cols=67 Identities=21% Similarity=0.208 Sum_probs=50.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||-++|.|..|..+++.|++. ||+|++.+|++++.+.+.+.|.+...-..+..+++|+||-|.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~ 72 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADD 72 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSH
T ss_pred CcEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccch
Confidence 5899999999999999999999 999999999999888887777765433336789999999988753
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=2.5e-05 Score=72.91 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=51.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce-------------------eeccCc-cccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-------------------PSLKWT-EATQKFP 144 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~-------------------~~~~D~-~~~~~~D 144 (268)
|||.|+|+|++|..++..|.+. |++|++++|++++.+.+...+.. ....|. +.+.++|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 4899999999999999999999 99999999988776665432110 111233 3578999
Q ss_pred EEEEccCCC
Q 024417 145 YVIFCAPPS 153 (268)
Q Consensus 145 ~Vi~~a~~~ 153 (268)
+||.|.+..
T Consensus 79 vviiaVptp 87 (436)
T 1mv8_A 79 VSFICVGTP 87 (436)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999999753
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.93 E-value=9.2e-06 Score=71.33 Aligned_cols=65 Identities=17% Similarity=0.342 Sum_probs=54.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .+. +.+.++|+||.|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~~~~~~aDvvi~~vp~ 67 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAALGAERA-ATPCEVVESCPVTFAMLAD 67 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeec-CCHHHHHhcCCEEEEEcCC
Confidence 5899999999999999999999 9999999999888877776666543 233 467789999988873
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.91 E-value=6.7e-05 Score=70.89 Aligned_cols=70 Identities=11% Similarity=0.083 Sum_probs=53.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCC----cchhhhcCC---------------------ceeeccC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD----HHDELINMG---------------------ITPSLKW 136 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~----~~~~l~~~~---------------------i~~~~~D 136 (268)
.+|||.|+|+|++|..++..|.+. ||+ +|++++++++ +.+.+.... --....|
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd 95 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD 95 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence 367999999999999999999886 589 9999999988 665554311 0111124
Q ss_pred ccccCCCCEEEEccCCC
Q 024417 137 TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 137 ~~~~~~~D~Vi~~a~~~ 153 (268)
.+++.++|+||.|.+..
T Consensus 96 ~ea~~~aDvViiaVptp 112 (478)
T 3g79_A 96 FSRISELDAVTLAIQTP 112 (478)
T ss_dssp GGGGGGCSEEEECCCCC
T ss_pred HHHHhcCCEEEEecCCc
Confidence 45788999999998754
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.91 E-value=1.1e-05 Score=70.90 Aligned_cols=66 Identities=17% Similarity=0.302 Sum_probs=53.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
||+|.|+|+ |.+|+.+++.|.+. |++|++.+|++++.+.+...++... +. +.+.++|+||.+.++.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~--~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMGIPLT--DGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTTCCCC--CSSGGGGTCSEEEECSCHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcCCCcC--CHHHHhcCCCEEEEcCCch
Confidence 579999999 99999999999999 9999999998777666655554332 33 5678999999988764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00021 Score=69.41 Aligned_cols=131 Identities=15% Similarity=0.126 Sum_probs=81.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-c-chhhhcCC--ceeeccCc-c-----------ccCCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-H-HDELINMG--ITPSLKWT-E-----------ATQKFP 144 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~-~~~l~~~~--i~~~~~D~-~-----------~~~~~D 144 (268)
+..+.+||||+ +-||+.++++|.++ |++|++.+|... . .+++...+ +..+..|. + .....|
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iD 397 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKY--GAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTID 397 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHC--CCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCC
Confidence 44567899997 99999999999999 999999886322 1 12333333 22334454 1 246899
Q ss_pred EEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCee-ecCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~E~~~~~p~~ 202 (268)
++||+|+..... + |...+ +.++ .++.+-.++|++||..- ++. | +
T Consensus 398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-------------~-~ 463 (604)
T 2et6_A 398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-------------F-G 463 (604)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC-------------T-T
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC-------------C-C
Confidence 999999964321 1 21111 1111 13345579999999653 231 1 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLA 228 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~ 228 (268)
...|+.+|...+.+.+.. + +..+.|+
T Consensus 464 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 464 QANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 157999998777655432 3 5777887
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.4e-05 Score=71.01 Aligned_cols=65 Identities=17% Similarity=0.267 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~ 151 (268)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+...++... .+. +.+.++|+||.+.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQEGARLG-RTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHTTCEEC-SCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHcCCEEc-CCHHHHHhcCCEEEEeCC
Confidence 47899999999999999999999 9999999999887776665565432 233 45678999998877
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.85 E-value=8.5e-06 Score=72.45 Aligned_cols=68 Identities=19% Similarity=0.252 Sum_probs=54.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
++++|.|+|+|.+|..+++.|++. |++|++.+|++++.+.+...++... .+. +.++++|+||.+.+..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~-~~~~e~~~~aDvVi~~vp~~ 76 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAAGAHLC-ESVKAALSASPATIFVLLDN 76 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTCEEC-SSHHHHHHHSSEEEECCSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeec-CCHHHHHhcCCEEEEEeCCH
Confidence 367899999999999999999999 9999999999887776665565432 233 4677899999888753
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.6e-05 Score=69.91 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=51.4
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc-------cccCCCCEEEEc
Q 024417 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-------EATQKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~-------~~~~~~D~Vi~~ 149 (268)
..+++||+| +|.+|+.+++.|+++ |++|++++|+.++.+.+.+ .++....+|. +.++++|+|||+
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ 195 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 195 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence 347899999 599999999999999 9999999998665543321 1333333342 256789999999
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
++..
T Consensus 196 ag~g 199 (287)
T 1lu9_A 196 GAIG 199 (287)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 9854
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=1.3e-05 Score=71.32 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=57.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
.|+||-++|.|..|..+++.|++. ||+|++.+|++++.+.+...|.....--.++.+++|+||-|.+.
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~ 69 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPA 69 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSC
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCc
Confidence 388999999999999999999999 99999999999888888777765542222678999999998875
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.84 E-value=9.1e-06 Score=69.82 Aligned_cols=67 Identities=15% Similarity=0.254 Sum_probs=53.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC----eEEEEeCCCCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~----~V~~~~R~~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+||.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+.+.. .++... .|. +.+.++|+||.+..+.
T Consensus 2 ~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~-~~~~e~~~~aDvVilav~~~ 74 (247)
T 3gt0_A 2 DKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEKYGLTTT-TDNNEVAKNADILILSIKPD 74 (247)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHHHCCEEC-SCHHHHHHHCSEEEECSCTT
T ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHHhCCEEe-CChHHHHHhCCEEEEEeCHH
Confidence 57899999999999999999999 98 99999999887766643 365543 233 5677899999998543
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=4.8e-05 Score=71.02 Aligned_cols=70 Identities=17% Similarity=0.205 Sum_probs=51.2
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC------------------CceeeccCc-ccc
Q 024417 80 GGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM------------------GITPSLKWT-EAT 140 (268)
Q Consensus 80 ~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~------------------~i~~~~~D~-~~~ 140 (268)
+...||||.|+|+|++|..++..|. + |++|+++++++++.+.+... ++. ...|. +++
T Consensus 32 r~~~~mkIaVIGlG~mG~~lA~~La-~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~-~ttd~~ea~ 107 (432)
T 3pid_A 32 RGSEFMKITISGTGYVGLSNGVLIA-Q--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFR-ATTDKHDAY 107 (432)
T ss_dssp ---CCCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEE-EESCHHHHH
T ss_pred cccCCCEEEEECcCHHHHHHHHHHH-c--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeE-EEcCHHHHH
Confidence 3345789999999999999999775 5 89999999998776655431 111 12343 578
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
+++|+||.+.+..
T Consensus 108 ~~aDvViiaVPt~ 120 (432)
T 3pid_A 108 RNADYVIIATPTD 120 (432)
T ss_dssp TTCSEEEECCCCE
T ss_pred hCCCEEEEeCCCc
Confidence 8999999988754
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=9.4e-06 Score=71.36 Aligned_cols=66 Identities=12% Similarity=0.262 Sum_probs=52.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .|. +.+.++|+||.+.+.
T Consensus 5 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~v~~ 71 (299)
T 1vpd_A 5 TMKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAETA-STAKAIAEQCDVIITMLPN 71 (299)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred cceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHCCCeec-CCHHHHHhCCCEEEEECCC
Confidence 36899999999999999999999 9999999998877766665565432 333 456789999998874
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.81 E-value=1.1e-05 Score=76.08 Aligned_cols=70 Identities=14% Similarity=0.127 Sum_probs=53.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc-------cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
.|++|+|+|+|.+|+.+++.|++. ++++|++.+|+.++.+.+.. .++..+..|. +.+.++|+||+|++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred CCCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 467899999999999999999986 36899999998777655543 2444444442 2467999999999864
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=3e-05 Score=69.41 Aligned_cols=70 Identities=19% Similarity=0.273 Sum_probs=53.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCC--cchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD--HHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~--~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+.+|+|.|+|+|.+|..++..|.+. | ++|++.+|+++ +.+.+...|+.......+.+.++|+||.+..+.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~~ 95 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPH 95 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCHH
Confidence 4457899999999999999999998 8 89999999876 555665556654322225677899999988753
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.6e-05 Score=68.05 Aligned_cols=68 Identities=24% Similarity=0.490 Sum_probs=53.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCcee-eccCc-cccC-CCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITP-SLKWT-EATQ-KFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~-~~~D~-~~~~-~~D~Vi~~a~~~ 153 (268)
|++|.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+.+...|+.. ...|. +.+. ++|+||.+.++.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 73 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH
Confidence 57999999999999999999998 98 9999999877666555556532 22344 5677 999999988764
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00011 Score=68.76 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=53.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCC-------ce------------eeccCc-cccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG-------IT------------PSLKWT-EATQKF 143 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~-------i~------------~~~~D~-~~~~~~ 143 (268)
.-+|.|+|+|++|..++..|.+. ||+|++.+|++++.+.+.... ++ ....|+ ++++++
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred ceEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 45899999999999999999999 999999999998887765421 11 112344 478899
Q ss_pred CEEEEccCCC
Q 024417 144 PYVIFCAPPS 153 (268)
Q Consensus 144 D~Vi~~a~~~ 153 (268)
|+||.|.+..
T Consensus 86 Dvvii~Vptp 95 (446)
T 4a7p_A 86 DAVFIAVGTP 95 (446)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEEcCCC
Confidence 9999997643
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00018 Score=64.59 Aligned_cols=73 Identities=14% Similarity=0.184 Sum_probs=53.6
Q ss_pred CCCCCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch----hhhc------CCceee-ccCccccCCCCEE
Q 024417 79 SGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD----ELIN------MGITPS-LKWTEATQKFPYV 146 (268)
Q Consensus 79 ~~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~----~l~~------~~i~~~-~~D~~~~~~~D~V 146 (268)
|..+.++||.|+|+|.+|..++..|... |+ +|+.+++++++.+ .+.. ...+.. ..|.++++++|+|
T Consensus 2 ~~~m~~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiV 79 (324)
T 3gvi_A 2 PGSMARNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVV 79 (324)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEE
T ss_pred CCCCcCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEE
Confidence 4456678999999999999999999998 88 9999999887643 1211 122222 2466889999999
Q ss_pred EEccCCC
Q 024417 147 IFCAPPS 153 (268)
Q Consensus 147 i~~a~~~ 153 (268)
|.+++..
T Consensus 80 Iiaag~p 86 (324)
T 3gvi_A 80 IVTAGVP 86 (324)
T ss_dssp EECCSCC
T ss_pred EEccCcC
Confidence 9999854
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=9.6e-06 Score=67.67 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=49.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-C-----ceeeccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-----ITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~-----i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|||+|+| +|.+|+.+++.|.+. |++|++++|++++.+.+.+. + .+....+. +.++++|+||++.++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~ 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWE 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChh
Confidence 4799999 799999999999999 99999999987665544321 2 01111222 4567899999998754
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.78 E-value=1.2e-05 Score=69.25 Aligned_cols=67 Identities=12% Similarity=0.184 Sum_probs=52.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-CceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
||+|.|+|+|.+|+.+++.|.+. |++|.+.+|++++.+.+... ++.. ..|. +.+.++|+||.+.++.
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~D~Vi~~v~~~ 71 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPY-AMSHQDLIDQVDLVILGIKPQ 71 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCB-CSSHHHHHHTCSEEEECSCGG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHcCCEe-eCCHHHHHhcCCEEEEEeCcH
Confidence 67999999999999999999998 99999999987776655432 5543 2333 4567899999988743
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.9e-05 Score=69.20 Aligned_cols=66 Identities=21% Similarity=0.309 Sum_probs=50.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+||+|.|+|+|.+|+.+++.|.+. |++|++.+ ++++.+.+...++... .+. +.+.++|+||.+.+.
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~vp~ 68 (295)
T 1yb4_A 2 NAMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSLGAVNV-ETARQVTEFADIIFIMVPD 68 (295)
T ss_dssp --CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTTTCBCC-SSHHHHHHTCSEEEECCSS
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHcCCccc-CCHHHHHhcCCEEEEECCC
Confidence 367999999999999999999999 99999988 8777776665555432 233 456789999988754
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.74 E-value=3.2e-05 Score=67.72 Aligned_cols=72 Identities=21% Similarity=0.315 Sum_probs=53.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce-eeccCc-cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-PSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~-~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+.|++|.|+|+|.+|..+++.|.+..+|++|++.+|++++.+.+...++. ....|. +.+.++|+||.+.++.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~ 77 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK 77 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH
Confidence 34679999999999999999999872357999999987766665555542 122343 4677899999988753
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00018 Score=64.65 Aligned_cols=69 Identities=17% Similarity=0.231 Sum_probs=52.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc------CCceeeccCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~------~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
++||.|+|+|.+|..++..|+.. |+ +|+.+++++++.+. |.. .+++....|.++++++|+||.+++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAG 82 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecc
Confidence 46899999999999999999998 87 99999997665432 221 133334445678999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 83 ~p~ 85 (326)
T 3pqe_A 83 ANQ 85 (326)
T ss_dssp CCC
T ss_pred cCC
Confidence 643
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.73 E-value=1.6e-05 Score=69.94 Aligned_cols=66 Identities=14% Similarity=0.275 Sum_probs=52.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .+. +.+.++|+||.+.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~vp~ 70 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQGAQAC-ENNQKVAAASDIIFTSLPN 70 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCeec-CCHHHHHhCCCEEEEECCC
Confidence 46899999999999999999999 9999999998777666655565432 233 456789999988864
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.73 E-value=4.2e-05 Score=66.51 Aligned_cols=66 Identities=17% Similarity=0.297 Sum_probs=52.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee-eccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~-~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++.. ...|. +. .++|+||.+.++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~ 68 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ 68 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH
Confidence 4899999999999999999999 999999999877766665555531 22344 35 8999999988764
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=4.1e-05 Score=65.91 Aligned_cols=64 Identities=22% Similarity=0.313 Sum_probs=51.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcC-CceeeccCc-cccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~-~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
|+|.|+|+|.+|..+++.|.+. | ++|++.+|++++.+.+... ++... .|. +.+ ++|+||.+.++
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~~g~~~~-~~~~~~~-~~D~vi~~v~~ 67 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELGVETS-ATLPELH-SDDVLILAVKP 67 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTCCEEE-SSCCCCC-TTSEEEECSCH
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHhcCCEEe-CCHHHHh-cCCEEEEEeCc
Confidence 4799999999999999999999 9 9999999988777666543 66543 233 456 89999988763
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.72 E-value=3.6e-05 Score=66.57 Aligned_cols=67 Identities=16% Similarity=0.184 Sum_probs=53.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchhhhcC-CceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM-GITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~l~~~-~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+|+|.|+|+|.+|+.+++.|.+. |++ |.+.+|++++.+.+... ++... .|. +.+.++|+||.+.++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~Dvvi~av~~~ 79 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEYT-TDLAEVNPYAKLYIVSLKDS 79 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEEE-SCGGGSCSCCSEEEECCCHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCcee-CCHHHHhcCCCEEEEecCHH
Confidence 46899999999999999999999 998 88999987776655443 55443 344 4678999999988765
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4e-05 Score=71.17 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=58.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~ 152 (268)
.++|+|+|+|.+|+.+++.|.++ |++|+++++++++.+.+...++..+.+|. + -+.++|+||.+.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 46899999999999999999999 99999999999888888778888888885 1 26789999987754
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00032 Score=62.45 Aligned_cols=69 Identities=13% Similarity=0.162 Sum_probs=50.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hhc------CCceeec-cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LIN------MGITPSL-KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~~------~~i~~~~-~D~~~~~~~D~Vi~~a~ 151 (268)
|+||.|+|+|.+|..++..|... |+ +|..+++++++.+. +.. ...+... .|.++++++|+||.+++
T Consensus 2 ~~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 2 RKKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSG 79 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHHCCCCEEEEcCC
Confidence 57999999999999999999998 87 99999988765432 111 1122222 46678999999999997
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 80 ~p~ 82 (309)
T 1ur5_A 80 APR 82 (309)
T ss_dssp C--
T ss_pred CCC
Confidence 543
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.70 E-value=1.7e-05 Score=62.30 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=52.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeecc-Cc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~-D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+. ..+.+.... +. +.+.++|+||.+.+...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC
Confidence 46899999999999999999998 999999999887765543 234443322 32 46789999999887653
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.69 E-value=3.4e-05 Score=65.45 Aligned_cols=65 Identities=11% Similarity=-0.080 Sum_probs=53.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~ 152 (268)
.++|+|+|+|.+|+.+++.|.++ |+ |+++++++++.+.+. .++..+.+|. + .+.++|.||.+.+.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CCEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 35899999999999999999999 99 999999988776666 6788887775 1 26799999987654
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=2.2e-05 Score=68.82 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=51.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...++... .|. +.+.++|+||.+.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~Dvvi~~vp~ 66 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDAGEQVV-SSPADVAEKADRIITMLPT 66 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeec-CCHHHHHhcCCEEEEeCCC
Confidence 4799999999999999999999 9999999999887776666565432 233 456778988888753
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.69 E-value=3.9e-05 Score=68.93 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Cce-------------eeccCc-cccCCCCEEEE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GIT-------------PSLKWT-EATQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~-------------~~~~D~-~~~~~~D~Vi~ 148 (268)
+|||.|+|+|.+|..++..|.+. |++|++++|++++.+.+.+. ++. ....|. +.+.++|+||.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 46999999999999999999999 99999999987766655443 221 111233 34678999999
Q ss_pred ccCCC
Q 024417 149 CAPPS 153 (268)
Q Consensus 149 ~a~~~ 153 (268)
+.+..
T Consensus 82 ~v~~~ 86 (359)
T 1bg6_A 82 VVPAI 86 (359)
T ss_dssp CSCGG
T ss_pred eCCch
Confidence 88754
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00016 Score=64.52 Aligned_cols=70 Identities=14% Similarity=0.270 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee--------------ccCcccc-CCCCEEEE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--------------LKWTEAT-QKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~--------------~~D~~~~-~~~D~Vi~ 148 (268)
+|||+|+|+|.+|..++..|.+. |++|+.++|++ .+.+.+.|+... ..|.+.+ +++|+||.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSD--YETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTT--HHHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCh--HHHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 47999999999999999999999 99999999975 244444443221 1233333 48999999
Q ss_pred ccCCCCCCC
Q 024417 149 CAPPSRSLD 157 (268)
Q Consensus 149 ~a~~~~~~~ 157 (268)
+..+....+
T Consensus 78 avK~~~~~~ 86 (320)
T 3i83_A 78 CIKVVEGAD 86 (320)
T ss_dssp CCCCCTTCC
T ss_pred ecCCCChHH
Confidence 988765433
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00011 Score=69.46 Aligned_cols=68 Identities=18% Similarity=0.195 Sum_probs=52.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-------Cce------------eeccCc-cccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------GIT------------PSLKWT-EATQK 142 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-------~i~------------~~~~D~-~~~~~ 142 (268)
+.|||.|+|+|++|..++..|.+. |++|++++|++++.+.+... +++ ....|. +.+.+
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 457999999999999999999999 99999999988777666543 211 111233 35778
Q ss_pred CCEEEEccCC
Q 024417 143 FPYVIFCAPP 152 (268)
Q Consensus 143 ~D~Vi~~a~~ 152 (268)
+|+||.|.+.
T Consensus 85 aDvviiaVpt 94 (478)
T 2y0c_A 85 GDVQFIAVGT 94 (478)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEEEeCC
Confidence 9999999875
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.67 E-value=5e-05 Score=68.21 Aligned_cols=66 Identities=18% Similarity=0.171 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec------------cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~------------~D~~~~~~~D~Vi~~a~ 151 (268)
+|||.|+|+|.+|..++..|.+. |++|++++|+ ++.+.+.+.++.... .|.+.+.++|+||.+..
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilavk 79 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAVK 79 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeCC
Confidence 57999999999999999999999 9999999996 455555555544321 23344678999998876
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
+
T Consensus 80 ~ 80 (335)
T 3ghy_A 80 A 80 (335)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.67 E-value=5.2e-05 Score=67.38 Aligned_cols=67 Identities=16% Similarity=0.128 Sum_probs=51.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC----------ccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW----------TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D----------~~~~~~~D~Vi~~a~~~ 153 (268)
+|||+|+|+|-+|..++..|. . |++|+.++|++++.+.+.+.|+.....+ .+....+|+||.+..+.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~~ 78 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQH 78 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCGG
T ss_pred CCEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCHH
Confidence 579999999999999999999 8 9999999998766666655565443111 13467899999887653
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=5.3e-05 Score=65.86 Aligned_cols=68 Identities=10% Similarity=0.090 Sum_probs=51.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCC---c----eeeccCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---I----TPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~---i----~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
|||.|+|+|.+|..++..|.+. |++|++++|++++.+.+...+ . .....+.+.+.++|+||.+.++..
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~~ 75 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ 75 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHHh
Confidence 4899999999999999999999 999999999887665543322 1 111123346678999999988753
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00051 Score=61.58 Aligned_cols=71 Identities=14% Similarity=0.164 Sum_probs=53.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcch----hhhc------CCceee-ccCccccCCCCEEEEc
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD----ELIN------MGITPS-LKWTEATQKFPYVIFC 149 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~----~l~~------~~i~~~-~~D~~~~~~~D~Vi~~ 149 (268)
+.++||.|+|+|.+|..++..|... +. +|..+++++++.+ .+.. ...+.. ..|.++++++|+||.+
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ 80 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVT 80 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEc
Confidence 3467999999999999999999998 77 9999999887643 1221 122222 2466789999999999
Q ss_pred cCCCC
Q 024417 150 APPSR 154 (268)
Q Consensus 150 a~~~~ 154 (268)
++...
T Consensus 81 ag~p~ 85 (321)
T 3p7m_A 81 AGVPR 85 (321)
T ss_dssp CSCCC
T ss_pred CCcCC
Confidence 98543
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00011 Score=69.46 Aligned_cols=70 Identities=11% Similarity=0.077 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce------------------eeccCc-cccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------------PSLKWT-EATQKF 143 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~------------------~~~~D~-~~~~~~ 143 (268)
+||||.|+|+|++|..++..|.+..+|++|++++|++++.+.+...+.. ....|+ +.+.++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 3679999999999999999999873468999999988776665432110 111232 456789
Q ss_pred CEEEEccCC
Q 024417 144 PYVIFCAPP 152 (268)
Q Consensus 144 D~Vi~~a~~ 152 (268)
|+||.|.+.
T Consensus 88 Dvvii~Vpt 96 (481)
T 2o3j_A 88 DLIFISVNT 96 (481)
T ss_dssp SEEEECCCC
T ss_pred CEEEEecCC
Confidence 999999864
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=7.8e-05 Score=66.24 Aligned_cols=69 Identities=14% Similarity=-0.025 Sum_probs=52.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchhhhc----------CCceeeccCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN----------MGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~l~~----------~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
||||.|+|+|.+|..++..|.+. | ++|+.++|++++.+.+.. ..++....|.+.++++|+||.+++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~aDvViiav~ 78 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLG 78 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhCCCCEEEEecC
Confidence 57999999999999999999999 8 899999998765543321 112332356678899999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 79 ~~~ 81 (309)
T 1hyh_A 79 NIK 81 (309)
T ss_dssp CGG
T ss_pred Ccc
Confidence 643
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.65 E-value=3.1e-05 Score=66.56 Aligned_cols=71 Identities=11% Similarity=0.091 Sum_probs=50.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc--------------chhhhc-CCceeeccCc-cccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--------------HDELIN-MGITPSLKWT-EATQKFP 144 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~--------------~~~l~~-~~i~~~~~D~-~~~~~~D 144 (268)
...+++|.|+|+|.+|..+++.|++. |++|++.+|++++ ...+.. .+.... .|. +.++++|
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~~~aD 92 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHL-AAFADVAAGAE 92 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEE-EEHHHHHHHCS
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceec-cCHHHHHhcCC
Confidence 34568999999999999999999999 9999999998765 222221 122111 222 4678999
Q ss_pred EEEEccCCCC
Q 024417 145 YVIFCAPPSR 154 (268)
Q Consensus 145 ~Vi~~a~~~~ 154 (268)
+||.+.++..
T Consensus 93 vVilavp~~~ 102 (245)
T 3dtt_A 93 LVVNATEGAS 102 (245)
T ss_dssp EEEECSCGGG
T ss_pred EEEEccCcHH
Confidence 9999988754
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0003 Score=62.77 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=28.6
Q ss_pred CCeEEEEccc---HHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~GaG---~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.+.+||||+| .||++++++|.++ |++|++.+|+
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~--G~~Vv~~~~~ 37 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWP 37 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECH
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecC
Confidence 4679999974 8999999999999 9999977654
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.65 E-value=6e-05 Score=70.96 Aligned_cols=68 Identities=9% Similarity=0.080 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-------------------CceeeccCc-cccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------------GITPSLKWT-EATQKF 143 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-------------------~i~~~~~D~-~~~~~~ 143 (268)
||||.|+|+|++|..++..|.+..+|++|++++|++++.+.+... ++.. ..|. +.+.++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~~a 83 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIKEA 83 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHhcC
Confidence 579999999999999999999873468999999987766554321 1111 1233 356789
Q ss_pred CEEEEccCC
Q 024417 144 PYVIFCAPP 152 (268)
Q Consensus 144 D~Vi~~a~~ 152 (268)
|+||.|.+.
T Consensus 84 DvViiaVpt 92 (467)
T 2q3e_A 84 DLVFISVNT 92 (467)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEcCC
Confidence 999999864
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.65 E-value=7.7e-05 Score=67.86 Aligned_cols=69 Identities=17% Similarity=0.249 Sum_probs=52.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee-------------eccCc-cccCCCCEEEE
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------------SLKWT-EATQKFPYVIF 148 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~-------------~~~D~-~~~~~~D~Vi~ 148 (268)
.+|||.|+|+|.+|..++..|.+. |++|++.+|++++.+.+...+... ...|. +++.++|+||.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred cCCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 357999999999999999999999 999999999877665554332111 11244 46789999998
Q ss_pred ccCCC
Q 024417 149 CAPPS 153 (268)
Q Consensus 149 ~a~~~ 153 (268)
+.++.
T Consensus 106 aVp~~ 110 (356)
T 3k96_A 106 VVPSF 110 (356)
T ss_dssp CCCHH
T ss_pred CCCHH
Confidence 87653
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=3.8e-05 Score=66.91 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=51.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
||+|.|+|+|.+|..+++.|.+ |++|++.+|++++.+.+...++.... ..+.+.++|+||.+.+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~ 66 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTT 66 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSH
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCCh
Confidence 5789999999999999999975 78999999988776666544544433 335677899999888753
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00035 Score=67.84 Aligned_cols=130 Identities=15% Similarity=0.122 Sum_probs=78.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC---------Ccchh----hhcCCcee--eccCc---------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---------DHHDE----LINMGITP--SLKWT--------- 137 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~---------~~~~~----l~~~~i~~--~~~D~--------- 137 (268)
..+.+||||+ +-||+.++++|.++ |++|++.+|+. +..+. +...+.+. ...|.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~ 84 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVET 84 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHH
Confidence 3467999997 89999999999999 99999988764 22222 22223222 22232
Q ss_pred --cccCCCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCee-ecCCCCCCCC
Q 024417 138 --EATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACD 193 (268)
Q Consensus 138 --~~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~v-Yg~~~~~~~~ 193 (268)
+.....|++||+|+..... + |.+.+ +.++ .++.+-.++|.+||..- ++..
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~------ 158 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF------ 158 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT------
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC------
Confidence 1356899999999964321 1 21111 1111 12344569999999653 3311
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeC
Q 024417 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLA 228 (268)
Q Consensus 194 E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~ 228 (268)
. ...|+.+|...+.+.+.. + +..+.|+
T Consensus 159 ------~--~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 159 ------G--QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp ------T--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ------C--chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 1 157999998777655433 3 4677886
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.63 E-value=5.1e-05 Score=66.55 Aligned_cols=68 Identities=24% Similarity=0.260 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-------------Cce-----------eeccCc-c
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------GIT-----------PSLKWT-E 138 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-------------~i~-----------~~~~D~-~ 138 (268)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+... ++. ....|. +
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 57899999999999999999999 99999999987665433221 110 112344 3
Q ss_pred ccCCCCEEEEccCCC
Q 024417 139 ATQKFPYVIFCAPPS 153 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~ 153 (268)
.+.++|+||.+.+..
T Consensus 82 ~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 82 AVKDADLVIEAVPES 96 (283)
T ss_dssp HTTTCSEEEECCCSC
T ss_pred HhccCCEEEEeccCc
Confidence 688999999998765
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00038 Score=62.60 Aligned_cols=69 Identities=16% Similarity=0.144 Sum_probs=52.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcch----hhhc-----CCceeeccCccccCCCCEEEEccC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD----ELIN-----MGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~----~l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
.++||.|+|+|.+|..++..|+.. |. +|..+++++++.+ .+.. ..++....|.+.++++|+||++++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAG 85 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCC
Confidence 357999999999999999999998 77 8999999765443 1211 133334455678999999999998
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 86 ~~ 87 (326)
T 3vku_A 86 AP 87 (326)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00042 Score=74.53 Aligned_cols=133 Identities=11% Similarity=0.007 Sum_probs=81.4
Q ss_pred CCCeEEEEcc-cH-HHHHHHHHHHhcCCCCeEEEE-eCCCCcchh----hh----cCC--ceeeccCc---c--------
Q 024417 83 GENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LI----NMG--ITPSLKWT---E-------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~-IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~----l~----~~~--i~~~~~D~---~-------- 138 (268)
..+.+||||+ |. ||++++++|+++ |++|+++ .|+.++... +. ..+ +..+.+|. +
T Consensus 674 ~gKvaLVTGASsGgIG~aIA~~La~~--GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 674 KDKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp TTCEEEEESCCSSSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 3467999997 77 999999999999 9999998 465544322 21 112 34455554 1
Q ss_pred ---c-----cC-CCCEEEEccCCCCCC-C---h---HHHHHH-----------HHH-H--hc-----CCCeEEEEccCee
Q 024417 139 ---A-----TQ-KFPYVIFCAPPSRSL-D---Y---PGDVRL-----------AAL-S--WN-----GEGSFLFTSSSAI 183 (268)
Q Consensus 139 ---~-----~~-~~D~Vi~~a~~~~~~-~---~---~~~~~~-----------~~~-~--~~-----gvkr~V~~SS~~v 183 (268)
. .. ..|+|||+|+..... . . .+.... +.. . .. +..+||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 1 22 599999999964322 1 0 111111 111 1 11 1258999998643
Q ss_pred ecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-H----HcC----ceEEEeCceec
Q 024417 184 YDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI-L----EFG----GCVLRLAGLYK 232 (268)
Q Consensus 184 Yg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l-~----~~~----~tIlRp~~vyG 232 (268)
+.. .. ..|+.+|...+.++ + +++ ++.+.||.+.+
T Consensus 832 ~~g-------------g~--~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 832 TFG-------------GD--GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp CSS-------------CB--TTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred ccC-------------CC--chHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 211 11 57999999888762 2 222 57889999985
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=65.75 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=54.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|+|.||+.+++.|... |++|++.+|+.++.+.....++... +. +.+.++|+|+.+.+...
T Consensus 153 l~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~--~l~e~l~~aDvVi~~vp~~~ 222 (330)
T 2gcg_A 153 LTQSTVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAEFQAEFV--STPELAAQSDFIVVACSLTP 222 (330)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHTTTCEEC--CHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHhcCceeC--CHHHHHhhCCEEEEeCCCCh
Confidence 4457899999999999999999999 9999999998765544444455443 44 46789999999888653
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00014 Score=64.23 Aligned_cols=70 Identities=17% Similarity=0.289 Sum_probs=54.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-cCc-cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-~D~-~~~~~~D~Vi~~a~~~ 153 (268)
...++|+|+|+|.+|+.+++.|+.. |.+|++.+|++++.+.+...+++... .+. +.++++|+|+.+.+..
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~ 226 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSM 226 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChh
Confidence 4467999999999999999999999 99999999987655444445655432 233 4678999999998874
|
| >3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.0001 Score=65.46 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=50.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-------------cCccccCCCCEEEEcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------KWTEATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-------------~D~~~~~~~D~Vi~~a 150 (268)
+|||+|+|+|-+|..++..|.+. |++|+.++|++ .+.+.+.|+.... .|.+....+|+||.+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vilav 77 (312)
T 3hn2_A 2 SLRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVGL 77 (312)
T ss_dssp --CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEec
Confidence 47899999999999999999999 99999999975 3555555543221 1334567899999988
Q ss_pred CCCC
Q 024417 151 PPSR 154 (268)
Q Consensus 151 ~~~~ 154 (268)
.+..
T Consensus 78 k~~~ 81 (312)
T 3hn2_A 78 KTFA 81 (312)
T ss_dssp CGGG
T ss_pred CCCC
Confidence 7654
|
| >3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00011 Score=65.46 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=51.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee------------ccCccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS------------LKWTEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~------------~~D~~~~~~~D~Vi~~a 150 (268)
.++||.|+|+|.+|..++..|.+. |++|+.+ +++++.+.+.+.+.... ..|.+...++|+||.+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEEc
Confidence 468999999999999999999999 9999999 77666666655444322 12334567899999988
Q ss_pred CCC
Q 024417 151 PPS 153 (268)
Q Consensus 151 ~~~ 153 (268)
...
T Consensus 95 k~~ 97 (318)
T 3hwr_A 95 KST 97 (318)
T ss_dssp CGG
T ss_pred ccc
Confidence 764
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00021 Score=66.70 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-------------cCc---cccCCCCEEE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------KWT---EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-------------~D~---~~~~~~D~Vi 147 (268)
..|+.|+|+|++|..++..|.+. ||+|+++++++++.+.+......... +.. ...+++|+||
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvi 88 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFI 88 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEE
T ss_pred CCccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEE
Confidence 35899999999999999999999 99999999998888776542211110 000 1246899999
Q ss_pred EccCCCC
Q 024417 148 FCAPPSR 154 (268)
Q Consensus 148 ~~a~~~~ 154 (268)
.|.+...
T Consensus 89 i~VpTp~ 95 (431)
T 3ojo_A 89 IAVPTPN 95 (431)
T ss_dssp ECCCCCB
T ss_pred EEeCCCc
Confidence 9988543
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00016 Score=63.71 Aligned_cols=70 Identities=17% Similarity=0.278 Sum_probs=54.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-cCc-cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-~D~-~~~~~~D~Vi~~a~~~ 153 (268)
...++|+|+|+|.+|+.+++.|+.. |.+|++.+|++++.+.+...+++... .+. +.+.++|+|+.+.+..
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~ 224 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPAL 224 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSSC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCChH
Confidence 4467999999999999999999999 99999999987655444445655432 233 4678999999998753
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.51 E-value=9.5e-05 Score=63.56 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=48.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC----CeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G----~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+|+|.|+|+|.+|+.+++.|.+. | ++|++.+|++++ .++... .|. +.+.++|+||.+.++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~------~g~~~~-~~~~~~~~~~D~vi~~v~~~ 69 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN------TTLNYM-SSNEELARHCDIIVCAVKPD 69 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS------SSSEEC-SCHHHHHHHCSEEEECSCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc------CceEEe-CCHHHHHhcCCEEEEEeCHH
Confidence 46899999999999999999999 8 799999998765 244322 233 4567899999888764
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.51 E-value=8.6e-05 Score=66.06 Aligned_cols=67 Identities=9% Similarity=0.060 Sum_probs=51.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC--CCCcchhhhcCCce----------eecc--Cc-cccCCCCEEEEc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMGIT----------PSLK--WT-EATQKFPYVIFC 149 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R--~~~~~~~l~~~~i~----------~~~~--D~-~~~~~~D~Vi~~ 149 (268)
|||.|+|+|.+|..++..|.+. |++|++++| ++++.+.+...+.. .... |. +.++++|+||.+
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEc
Confidence 4899999999999999999999 999999999 77666665544421 1111 33 357899999999
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
..+.
T Consensus 79 v~~~ 82 (335)
T 1txg_A 79 VSTD 82 (335)
T ss_dssp SCGG
T ss_pred CChH
Confidence 8875
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=3.4e-05 Score=69.96 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce------------e-eccCc-cccCCCCEEEEc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------P-SLKWT-EATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~------------~-~~~D~-~~~~~~D~Vi~~ 149 (268)
|++|.|+|+|.+|..++..|.+. |++|++.+|++++.+.+...+.. . ...|. +.+.++|+||.+
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVila 92 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFV 92 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEEC
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEEC
Confidence 33899999999999999999999 99999999987666555432210 1 11233 457899999998
Q ss_pred cCC
Q 024417 150 APP 152 (268)
Q Consensus 150 a~~ 152 (268)
..+
T Consensus 93 v~~ 95 (366)
T 1evy_A 93 IPT 95 (366)
T ss_dssp CCH
T ss_pred CCh
Confidence 875
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.49 E-value=6.8e-05 Score=70.56 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=53.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-----ccCCCCEEEEc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-----~~~~~D~Vi~~ 149 (268)
.|||+|.|+|-+|++|++.|.++ ||+|+++++++++.+.+.. .++..+.+|. + -++++|.+|-+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 47899999999999999999999 9999999999888777653 5788888875 1 36799988744
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00012 Score=65.63 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=51.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce----------eeccCccccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT----------PSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~----------~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
.+||.|+|+|.+|..++..|.+. |++|++.+|++++.+.+.+.+.. ....|++.+.++|+||.+..+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~aDvVil~vk~ 90 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPV 90 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGGCCTTEEEEECSCG
T ss_pred CCcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHHhcCCCEEEEECCH
Confidence 47999999999999999999999 99999999987776666544421 111233237789999988775
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00016 Score=66.75 Aligned_cols=66 Identities=14% Similarity=0.117 Sum_probs=50.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce-----------------eeccCc-cccCCCCEE
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-----------------PSLKWT-EATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~-----------------~~~~D~-~~~~~~D~V 146 (268)
|||.|+|+|++|..++..|.+ |++|++++|++++.+.+...+.. ....|. +.+.++|+|
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv 77 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV 77 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence 489999999999999999974 79999999998777666544431 111233 456789999
Q ss_pred EEccCCC
Q 024417 147 IFCAPPS 153 (268)
Q Consensus 147 i~~a~~~ 153 (268)
|.|.+..
T Consensus 78 iiavpt~ 84 (402)
T 1dlj_A 78 IIATPTN 84 (402)
T ss_dssp EECCCCC
T ss_pred EEecCCC
Confidence 9998765
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00023 Score=64.73 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=56.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCC-----CCeEEEEeCC--CCc-chh----hhc-CCceeeccCccccCCCCEEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHP-----GCQIYGQTMT--ADH-HDE----LIN-MGITPSLKWTEATQKFPYVIF 148 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~-----G~~V~~~~R~--~~~-~~~----l~~-~~i~~~~~D~~~~~~~D~Vi~ 148 (268)
.|+||.|+|+ |++|+.|++.|.++ | ..+|+.+.+. ..+ ... +.. ..+.....|.+.+.++|+||.
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~ 86 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFL 86 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEE
Confidence 3679999996 99999999999987 3 3588877632 222 221 111 122222223345669999999
Q ss_pred ccCCCCCCChHHHHHHHHHHhcCCCeEEEEccCe
Q 024417 149 CAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (268)
Q Consensus 149 ~a~~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~ 182 (268)
|++..... .+...+ +.| .++|-.|+..
T Consensus 87 alg~~~s~----~~~~~~--~~G-~~vIDlSa~~ 113 (352)
T 2nqt_A 87 ALPHGHSA----VLAQQL--SPE-TLIIDCGADF 113 (352)
T ss_dssp CCTTSCCH----HHHHHS--CTT-SEEEECSSTT
T ss_pred CCCCcchH----HHHHHH--hCC-CEEEEECCCc
Confidence 98876422 122221 345 5788888764
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00056 Score=61.93 Aligned_cols=91 Identities=14% Similarity=0.006 Sum_probs=54.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCc-eeeccCccccCCCCEEEEccCCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI-TPSLKWTEATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i-~~~~~D~~~~~~~D~Vi~~a~~~~~~ 156 (268)
|+||.|+|+ |++|+.+++.|.++ |..+++++.+.......+.. .+. +....+.+.+.++|+||.|++....
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~vDvV~~a~g~~~s- 81 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEKLEPADILVLALPHGVF- 81 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGGCCCCSEEEECCCTTHH-
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEECchhhCchhHHhCchhcCcccccccchhHhcCCCEEEEcCCcHHH-
Confidence 568999996 99999999999876 56798887764322111111 110 1111122235789999999876531
Q ss_pred ChHHHHHHHHHHhcCCCeEEEEccC
Q 024417 157 DYPGDVRLAALSWNGEGSFLFTSSS 181 (268)
Q Consensus 157 ~~~~~~~~~~~~~~gvkr~V~~SS~ 181 (268)
......+ .+.|+ ++|-.|+.
T Consensus 82 ---~~~a~~~-~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 82 ---AREFDRY-SALAP-VLVDLSAD 101 (345)
T ss_dssp ---HHTHHHH-HTTCS-EEEECSST
T ss_pred ---HHHHHHH-HHCCC-EEEEcCcc
Confidence 1111111 24454 68888874
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.0007 Score=63.63 Aligned_cols=68 Identities=13% Similarity=0.107 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----------CC----------ceeeccCccccC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MG----------ITPSLKWTEATQ 141 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----------~~----------i~~~~~D~~~~~ 141 (268)
.+++|.|+|+|.+|..++..|.+. |++|++.+++++..+.... .+ ...+..|.+.+.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 113 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTKELS 113 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCGGGGT
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCHHHHC
Confidence 367999999999999999999999 9999999998765432211 01 011233556788
Q ss_pred CCCEEEEccCC
Q 024417 142 KFPYVIFCAPP 152 (268)
Q Consensus 142 ~~D~Vi~~a~~ 152 (268)
++|+||.+.+.
T Consensus 114 ~aDlVIeaVpe 124 (463)
T 1zcj_A 114 TVDLVVEAVFE 124 (463)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEEcCCC
Confidence 99999999864
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00016 Score=63.87 Aligned_cols=68 Identities=13% Similarity=0.083 Sum_probs=50.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----------cCC------------------ceee
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----------NMG------------------ITPS 133 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----------~~~------------------i~~~ 133 (268)
.|++|.|+|+|.+|..++..|.+. |++|++.+|++++.+... ..| +..
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~- 90 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT- 90 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-
Confidence 367899999999999999999999 999999999876544321 112 111
Q ss_pred ccCcc-ccCCCCEEEEccCCC
Q 024417 134 LKWTE-ATQKFPYVIFCAPPS 153 (268)
Q Consensus 134 ~~D~~-~~~~~D~Vi~~a~~~ 153 (268)
..|.+ .+.++|+||.+.+..
T Consensus 91 ~~~~~~~~~~aD~Vi~avp~~ 111 (302)
T 1f0y_A 91 STDAASVVHSTDLVVEAIVEN 111 (302)
T ss_dssp ESCHHHHTTSCSEEEECCCSC
T ss_pred ecCHHHhhcCCCEEEEcCcCc
Confidence 23443 788999999988653
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00024 Score=74.61 Aligned_cols=132 Identities=11% Similarity=-0.003 Sum_probs=79.7
Q ss_pred CCeEEEEcc-cH-HHHHHHHHHHhcCCCCeEEEE-eCCCCcchh----hhc----CC--ceeeccCc---c---------
Q 024417 84 ENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LIN----MG--ITPSLKWT---E--------- 138 (268)
Q Consensus 84 m~kVLI~Ga-G~-IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~----l~~----~~--i~~~~~D~---~--------- 138 (268)
.+++||||+ |. ||++++++|+++ |++|+++ .|+.++... +.. .+ +..+.+|. +
T Consensus 476 GKvALVTGASgGGIGrAIAr~LA~~--GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 476 DKYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp SCCEEECSCSSSSTHHHHHHHHHHH--TCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHHC--cCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 467999997 77 999999999999 9999998 565544322 211 12 33444553 1
Q ss_pred --c-----cC-CCCEEEEccCCCCCC----Ch---HHHHH-----------HHHH-H-------hcCCCeEEEEccCeee
Q 024417 139 --A-----TQ-KFPYVIFCAPPSRSL----DY---PGDVR-----------LAAL-S-------WNGEGSFLFTSSSAIY 184 (268)
Q Consensus 139 --~-----~~-~~D~Vi~~a~~~~~~----~~---~~~~~-----------~~~~-~-------~~gvkr~V~~SS~~vY 184 (268)
. .. .+|+|||+|+..... +. .+... .+.. . +.+..+||++||..-+
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 1 22 589999999854222 10 11111 1110 0 1122589999986422
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-----C----ceEEEeCceec
Q 024417 185 DCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-----G----GCVLRLAGLYK 232 (268)
Q Consensus 185 g~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-----~----~tIlRp~~vyG 232 (268)
-. .. ..|+.+|...+.+..+. + +..+.||.+.|
T Consensus 634 ~G-------------g~--saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 634 FG-------------GD--GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp SS-------------CB--TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred cC-------------Cc--hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 10 11 57999999998873322 2 36677888874
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=65.96 Aligned_cols=66 Identities=14% Similarity=0.068 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC-------CeEEEEeCCCC-----cchhhhcCC--------------ceeeccCc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD-----HHDELINMG--------------ITPSLKWT 137 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G-------~~V~~~~R~~~-----~~~~l~~~~--------------i~~~~~D~ 137 (268)
||||.|+|+|.+|..++..|.+. | ++|++.+|+++ +.+.+...+ +.. ..|.
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~-~~~~ 97 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA-HSDL 97 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE-ESST
T ss_pred CCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE-ECCH
Confidence 56899999999999999999999 9 99999999877 555443211 111 1233
Q ss_pred -cccCCCCEEEEccCC
Q 024417 138 -EATQKFPYVIFCAPP 152 (268)
Q Consensus 138 -~~~~~~D~Vi~~a~~ 152 (268)
+++.++|+||.+.++
T Consensus 98 ~ea~~~aDvVilav~~ 113 (375)
T 1yj8_A 98 ASVINDADLLIFIVPC 113 (375)
T ss_dssp HHHHTTCSEEEECCCH
T ss_pred HHHHcCCCEEEEcCCH
Confidence 457899999998875
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00021 Score=63.40 Aligned_cols=69 Identities=20% Similarity=0.271 Sum_probs=50.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcch--hhh-cCC------ceeecc-CccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD--ELI-NMG------ITPSLK-WTEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~--~l~-~~~------i~~~~~-D~~~~~~~D~Vi~~a 150 (268)
++|||.|+|+|.+|..++..|... |+ +|+.++|++++.+ .+. ..+ ...... |.+.+.++|+||.++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v 83 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITA 83 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECC
Confidence 357999999999999999999999 98 9999999865443 111 111 122222 456788999999999
Q ss_pred CCC
Q 024417 151 PPS 153 (268)
Q Consensus 151 ~~~ 153 (268)
+..
T Consensus 84 ~~~ 86 (319)
T 1lld_A 84 GPR 86 (319)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00019 Score=62.60 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=51.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Cc--eeeccCcccc--CCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GI--TPSLKWTEAT--QKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i--~~~~~D~~~~--~~~D~Vi~~a~~~~ 154 (268)
..++++|+|+|-+|+.+++.|.+. |.+|++..|+.++.+.+... +. .....|.+.+ .++|+||++++...
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGI 192 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGG
T ss_pred CCCEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCC
Confidence 357899999999999999999999 99999999987765544321 11 1222333333 58999999998643
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00036 Score=74.92 Aligned_cols=132 Identities=13% Similarity=0.015 Sum_probs=80.6
Q ss_pred CCCeEEEEcc-cH-HHHHHHHHHHhcCCCCeEEEEe-CCCCcch----hh----hcCC--ceeeccCc---c--------
Q 024417 83 GENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQT-MTADHHD----EL----INMG--ITPSLKWT---E-------- 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~-IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~----~l----~~~~--i~~~~~D~---~-------- 138 (268)
..+++||||+ |. ||++++++|+++ |++|++++ |+.++.. .+ ...+ +..+.+|. +
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~--GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSG--GAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 3468999997 88 999999999999 99999985 5444322 12 1113 34455564 1
Q ss_pred ---c---cC-CCCEEEEccCCCCCC----Ch---HHHHHH-----------HH-H----H---hcCCCeEEEEccCeeec
Q 024417 139 ---A---TQ-KFPYVIFCAPPSRSL----DY---PGDVRL-----------AA-L----S---WNGEGSFLFTSSSAIYD 185 (268)
Q Consensus 139 ---~---~~-~~D~Vi~~a~~~~~~----~~---~~~~~~-----------~~-~----~---~~gvkr~V~~SS~~vYg 185 (268)
. .. ..|+|||+|+..... +. .+.... +. . . +.+..+||++||..-+-
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 1 23 589999999864321 11 121111 11 0 0 11235899999964321
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-----cC----ceEEEeCcee
Q 024417 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE-----FG----GCVLRLAGLY 231 (268)
Q Consensus 186 ~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~-----~~----~tIlRp~~vy 231 (268)
. .. ..|+.+|...+.+... ++ ++.+.||.+-
T Consensus 809 g-------------g~--~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 809 G-------------ND--GLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp S-------------CC--SSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred C-------------Cc--hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 1 01 5799999988776432 22 5788899887
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00054 Score=61.16 Aligned_cols=68 Identities=12% Similarity=0.155 Sum_probs=48.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcch--hhhcCC----ceeec--cCcc-ccCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD--ELINMG----ITPSL--KWTE-ATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~--~l~~~~----i~~~~--~D~~-~~~~~D~Vi~~a~~ 152 (268)
|||.|+|+ |++|..++..|+.. | .+|..+++++.+.. .+.... ++... .|.+ +++++|+||++++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 48999998 99999999999988 7 79999999762111 122211 22221 2454 69999999999985
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 79 ~~ 80 (314)
T 1mld_A 79 PR 80 (314)
T ss_dssp CC
T ss_pred CC
Confidence 43
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0015 Score=58.77 Aligned_cols=67 Identities=12% Similarity=0.091 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhh----hc----C--Cceee-ccCcc-ccCCCCEEEEcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN----M--GITPS-LKWTE-ATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l----~~----~--~i~~~-~~D~~-~~~~~D~Vi~~a 150 (268)
++||.|+|+|.+|..++..|... |+ +|+.+++++++.+.. .. . ..+.. ..|.+ +++++|+||.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 46899999999999999999999 98 999999987655431 11 1 11121 14654 789999999999
Q ss_pred CC
Q 024417 151 PP 152 (268)
Q Consensus 151 ~~ 152 (268)
+.
T Consensus 87 g~ 88 (331)
T 1pzg_A 87 GL 88 (331)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.40 E-value=9e-05 Score=63.87 Aligned_cols=65 Identities=18% Similarity=0.290 Sum_probs=49.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC--CCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R--~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
|+|.|+|+|.+|..+++.|.+. |++|++.+| +++..+.+...|+. .|. +.+.++|+||.+.++..
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~aDvvi~~v~~~~ 68 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGVT---ETSEEDVYSCPVVISAVTPGV 68 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTCE---ECCHHHHHTSSEEEECSCGGG
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHCCCc---CCHHHHHhcCCEEEEECCCHH
Confidence 4799999999999999999999 999999777 33334444444554 333 45689999999888753
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00021 Score=62.50 Aligned_cols=68 Identities=18% Similarity=0.226 Sum_probs=53.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+.. .+++... +. +.+.++|+||.+.+...
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~g~~~~~-~~~~~~~~aDiVi~atp~~~ 198 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKFPLEVVN-SPEEVIDKVQVIVNTTSVGL 198 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTSCEEECS-CGGGTGGGCSEEEECSSTTS
T ss_pred CCEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHcCCeeeh-hHHhhhcCCCEEEEeCCCCC
Confidence 46899999999999999999999 9999999998776655533 2443321 33 46789999999988764
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.51 E-value=2.4e-05 Score=65.50 Aligned_cols=67 Identities=15% Similarity=0.188 Sum_probs=51.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
+.|+|.|+|+|.+|+.+++.|.+. |++|++.+|+++ .+.+...++... +. +.++++|+||.+..+..
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~~g~~~~--~~~~~~~~aDvVilav~~~~ 85 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLPRGAEVL--CYSEAASRSDVIVLAVHREH 85 (201)
Confidence 356899999999999999999999 999999999866 333433444432 33 56789999999888753
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00016 Score=65.12 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=52.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+++|.|+|+|.+|..+++.|.+. |++|++.+|++++ .+.....|++.. |. +.+.++|+||.+.++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~G~~~~--~~~e~~~~aDvVilavp~~ 83 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAHGLKVA--DVKTAVAAADVVMILTPDE 83 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHTTCEEE--CHHHHHHTCSEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHCCCEEc--cHHHHHhcCCEEEEeCCcH
Confidence 56899999999999999999999 9999999998765 333444566543 54 5678999999988764
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00037 Score=63.27 Aligned_cols=71 Identities=15% Similarity=0.224 Sum_probs=55.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|..- |++|++.+|++...+.....+++.. .++ +.++++|+|+.+.+.+.
T Consensus 161 ~l~gktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~~Plt~ 232 (351)
T 3jtm_A 161 DLEGKTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKETGAKFV-EDLNEMLPKCDVIVINMPLTE 232 (351)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHHCCEEC-SCHHHHGGGCSEEEECSCCCT
T ss_pred cccCCEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhCCCeEc-CCHHHHHhcCCEEEECCCCCH
Confidence 34567999999999999999999999 9999999998755544444465443 233 57889999999888643
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00038 Score=58.28 Aligned_cols=36 Identities=14% Similarity=0.297 Sum_probs=31.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
.+++|.|+|+|.+|+.+++.|.+. |++|++.+|+++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~ 53 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ 53 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH
Confidence 467999999999999999999999 999999998765
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00041 Score=62.29 Aligned_cols=68 Identities=18% Similarity=0.218 Sum_probs=50.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC-------CeEEEEeCCCC-----cchhhhcC--------Cce----ee-ccCc-
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD-----HHDELINM--------GIT----PS-LKWT- 137 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G-------~~V~~~~R~~~-----~~~~l~~~--------~i~----~~-~~D~- 137 (268)
+|||.|+|+|.+|..++..|.+. | ++|++.+|+++ +.+.+... +.. .. ..|.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 46899999999999999999999 8 99999999877 44444321 110 11 1233
Q ss_pred cccCCCCEEEEccCCC
Q 024417 138 EATQKFPYVIFCAPPS 153 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~ 153 (268)
+++.++|+||.+..+.
T Consensus 86 ~~~~~aD~Vilav~~~ 101 (354)
T 1x0v_A 86 QAAEDADILIFVVPHQ 101 (354)
T ss_dssp HHHTTCSEEEECCCGG
T ss_pred HHHcCCCEEEEeCCHH
Confidence 4578999999998763
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00032 Score=62.64 Aligned_cols=68 Identities=15% Similarity=0.000 Sum_probs=51.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhc---C------CceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELIN---M------GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~---~------~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|..++..|... |+ +|+.+++++++.+.+.. . .......|.+.++++|+||.+++..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~aDvViiav~~~ 78 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVP 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhCCCCEEEEccCCC
Confidence 4899999999999999999999 99 99999998665443211 0 1122223566789999999999864
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 79 ~ 79 (319)
T 1a5z_A 79 Q 79 (319)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00029 Score=63.45 Aligned_cols=68 Identities=18% Similarity=0.185 Sum_probs=53.2
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
....++|.|+|.|.||+.+++.|... |++|++.+|+++. +.....++.. .+. +.+.++|+|+.+++..
T Consensus 143 ~l~g~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~--~~l~e~l~~aDiVil~vp~~ 211 (333)
T 2d0i_A 143 SLYGKKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKELKARY--MDIDELLEKSDIVILALPLT 211 (333)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHHHTEEE--CCHHHHHHHCSEEEECCCCC
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhhcCcee--cCHHHHHhhCCEEEEcCCCC
Confidence 34567999999999999999999999 9999999998765 3223335543 244 4678999999988876
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0015 Score=58.30 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=50.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcch----hhhc------CCceee-ccCccccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD----ELIN------MGITPS-LKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~----~l~~------~~i~~~-~~D~~~~~~~D~Vi~~a~ 151 (268)
|||.|+|+|.+|..++..|+.. +. +|+.+++++++.+ .+.. ...+.. ..|.+.++++|+||.+++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCC
Confidence 5899999999999999999998 76 9999999887643 1221 122332 245679999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 79 ~~~ 81 (314)
T 3nep_X 79 LPR 81 (314)
T ss_dssp C--
T ss_pred CCC
Confidence 643
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00027 Score=63.68 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|+|.||+.+++.|... |++|++.+|++++ +.....++.. .+. +.+.++|+|+.+.+...
T Consensus 147 ~l~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~--~~l~~~l~~aDvVil~vp~~~ 216 (334)
T 2dbq_A 147 DVYGKTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVERELNAEF--KPLEDLLRESDFVVLAVPLTR 216 (334)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHHCCEE--CCHHHHHHHCSEEEECCCCCT
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhcCccc--CCHHHHHhhCCEEEECCCCCh
Confidence 34567999999999999999999999 9999999998765 3333345543 244 46789999999988765
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00056 Score=61.14 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=48.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhcC-----CceeeccCccccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~~-----~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
++||.|+|+|++|..++..|... +. +|..+|.++++.+. +... .++....|.++++++|+||.+++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA 84 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 46899999999999999999998 77 99999998765432 2111 222222455789999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 85 p~ 86 (318)
T 1y6j_A 85 NR 86 (318)
T ss_dssp --
T ss_pred CC
Confidence 43
|
| >3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00016 Score=63.65 Aligned_cols=69 Identities=16% Similarity=0.125 Sum_probs=49.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce--eeccCc-ccc-CCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT--PSLKWT-EAT-QKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~--~~~~D~-~~~-~~~D~Vi~~a~~~~ 154 (268)
+|||+|+|+|-+|..++..|.+. |++|+.++|+++........+.. .+..|. +.+ .++|+||.+..+..
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred CcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccC
Confidence 57999999999999999999999 99999999986654322222321 111232 344 78999998887754
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00021 Score=63.33 Aligned_cols=67 Identities=13% Similarity=0.150 Sum_probs=52.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-------CceeeccCccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-------~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
..++|.|+|+|.+|+.++..|+ . |++|++.+|+++..+..... ++... .|++.+.++|+||-+.+..
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~aDlVieavpe~ 84 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQIPEELLSKIEFT-TTLEKVKDCDIVMEAVFED 84 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHSCGGGGGGEEEE-SSCTTGGGCSEEEECCCSC
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHHHHHHhCCeEEe-CCHHHHcCCCEEEEcCcCC
Confidence 3579999999999999999999 9 99999999998776554333 33322 3444588999999988764
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00071 Score=59.16 Aligned_cols=66 Identities=18% Similarity=0.250 Sum_probs=52.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
.++++|+|+|-.|+.++..|.+. |.+|++..|+.++.+.+...+++... .+.+.++|+||++.+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~~~~~~~--~~~l~~~DiVInaTp~G 183 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRLGCDCFM--EPPKSAFDLIINATSAS 183 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHHTCEEES--SCCSSCCSEEEECCTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEec--HHHhccCCEEEEcccCC
Confidence 57899999999999999999999 99999999999887776544444332 22334899999997754
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00012 Score=66.16 Aligned_cols=67 Identities=12% Similarity=0.262 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-ccc----CCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT----QKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~----~~~D~Vi~~a~~~ 153 (268)
+++|.|+|+|.+|..+++.|++. |++|++.+|+++..+.....|+... .|. +.+ .++|+||.+.++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~G~~~~-~~~~e~~~~a~~~aDlVilavP~~ 79 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDEGFDVS-ADLEATLQRAAAEDALIVLAVPMT 79 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHTTCCEE-SCHHHHHHHHHHTTCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeee-CCHHHHHHhcccCCCEEEEeCCHH
Confidence 46899999999999999999999 9999999999877666666676432 233 233 4689999988853
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0014 Score=58.94 Aligned_cols=73 Identities=19% Similarity=0.108 Sum_probs=52.6
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhcC-----Cceee-ccCccccCCCCEEE
Q 024417 80 GGVGENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPS-LKWTEATQKFPYVI 147 (268)
Q Consensus 80 ~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~~-----~i~~~-~~D~~~~~~~D~Vi 147 (268)
....++||.|+|+|.+|..++..|+.. |. +|..+++++++.+. +... ....+ ..|.+.++++|+||
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVv 92 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVI 92 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEE
Confidence 344568999999999999999999988 76 89999997654332 2211 11112 34667899999999
Q ss_pred EccCCCC
Q 024417 148 FCAPPSR 154 (268)
Q Consensus 148 ~~a~~~~ 154 (268)
.+++...
T Consensus 93 i~aG~~~ 99 (331)
T 4aj2_A 93 ITAGARQ 99 (331)
T ss_dssp ECCSCCC
T ss_pred EccCCCC
Confidence 9998543
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00038 Score=61.95 Aligned_cols=69 Identities=14% Similarity=0.054 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|+.. |++|++.+|++++ ......+++.. +. +.++++|+|+.+.+...
T Consensus 139 ~l~g~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~ell~~aDvV~l~~p~~~ 208 (307)
T 1wwk_A 139 ELEGKTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEVNGKFV--DLETLLKESDVVTIHVPLVE 208 (307)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHTTCEEC--CHHHHHHHCSEEEECCCCST
T ss_pred ccCCceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhcCcccc--CHHHHHhhCCEEEEecCCCh
Confidence 34567899999999999999999999 9999999998765 33334565442 44 46789999999887654
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00037 Score=65.86 Aligned_cols=68 Identities=16% Similarity=0.232 Sum_probs=52.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC----CceeeccCc-cccC---CCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EATQ---KFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~----~i~~~~~D~-~~~~---~~D~Vi~~a~~~ 153 (268)
.+++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+... ++... .|+ +.+. .+|+||.+.++.
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~~~gi~~~-~s~~e~v~~l~~aDvVil~Vp~~ 89 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENPGKKLVPY-YTVKEFVESLETPRRILLMVKAG 89 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHSTTSCEEEC-SSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCCCCCeEEe-CCHHHHHhCCCCCCEEEEECCCH
Confidence 346899999999999999999999 99999999998777666443 44332 233 3344 499999998774
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00016 Score=63.78 Aligned_cols=70 Identities=13% Similarity=0.224 Sum_probs=51.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc--CC-C-CeEEEEeCCCCcchhhhc-CCceeec-------------cCccccCCCCE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQE--HP-G-CQIYGQTMTADHHDELIN-MGITPSL-------------KWTEATQKFPY 145 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~--~~-G-~~V~~~~R~~~~~~~l~~-~~i~~~~-------------~D~~~~~~~D~ 145 (268)
+|||.|+|+|.+|..++..|.+. .+ | ++|++++| +++.+.+.+ .|+.... .+.+...++|+
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ 86 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVDY 86 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCCE
Confidence 46899999999999999999864 01 5 89999999 666666665 5654432 12245678999
Q ss_pred EEEccCCCC
Q 024417 146 VIFCAPPSR 154 (268)
Q Consensus 146 Vi~~a~~~~ 154 (268)
||.+..+..
T Consensus 87 vil~vk~~~ 95 (317)
T 2qyt_A 87 ILFCTKDYD 95 (317)
T ss_dssp EEECCSSSC
T ss_pred EEEecCccc
Confidence 999888764
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00035 Score=63.27 Aligned_cols=71 Identities=14% Similarity=0.114 Sum_probs=54.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHH-hcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~-~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|. .. |++|++.+|++++.+.....++... .+. +.++++|+|+.+.+...
T Consensus 160 ~l~g~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvVil~vp~~~ 232 (348)
T 2w2k_A 160 NPRGHVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKALGAERV-DSLEELARRSDCVSVSVPYMK 232 (348)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHHHHCSEEEECCCCSG
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhhcCcEEe-CCHHHHhccCCEEEEeCCCCh
Confidence 345578999999999999999999 88 9999999998765443333455433 244 46789999999988753
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00045 Score=62.27 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=45.4
Q ss_pred CeEEEEc-ccHHHHHHHHHHHhcCCCC--e-----EEEEeCCCC--cc----hhhhcCC------ceeeccCccccCCCC
Q 024417 85 NDLLIVG-PGVLGRLVAEQWRQEHPGC--Q-----IYGQTMTAD--HH----DELINMG------ITPSLKWTEATQKFP 144 (268)
Q Consensus 85 ~kVLI~G-aG~IG~~L~~~L~~~~~G~--~-----V~~~~R~~~--~~----~~l~~~~------i~~~~~D~~~~~~~D 144 (268)
+||+|+| +|+||.+++..|... +. + +..+|+++. +. ..|.... +.....+.+.++++|
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCC
Confidence 5899999 599999999999887 65 4 888888642 11 1122211 111112236899999
Q ss_pred EEEEccCCC
Q 024417 145 YVIFCAPPS 153 (268)
Q Consensus 145 ~Vi~~a~~~ 153 (268)
+||++|+..
T Consensus 82 vVvitAg~p 90 (333)
T 5mdh_A 82 VAILVGSMP 90 (333)
T ss_dssp EEEECCSCC
T ss_pred EEEEeCCCC
Confidence 999999854
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00031 Score=62.82 Aligned_cols=63 Identities=10% Similarity=-0.058 Sum_probs=54.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~ 151 (268)
++|+|+|+|.+|+.++++|.++ |+ |+++++++++.+ +...++..+.+|. + .++++|.|+.+.+
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~--g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~ 186 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE 186 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGS--CE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS
T ss_pred CCEEEECCcHHHHHHHHHHHhC--Cc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC
Confidence 5799999999999999999999 99 999999988887 7777888888875 1 3678999997764
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00091 Score=63.26 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=52.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCC---ceee-ccCc-c---ccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPS-LKWT-E---ATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~---i~~~-~~D~-~---~~~~~D~Vi~~a~~~ 153 (268)
.|++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+...+ .... ..++ + .++++|+||.+.++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 367899999999999999999999 999999999988877665432 2221 1233 2 245799999988764
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0019 Score=57.20 Aligned_cols=68 Identities=16% Similarity=-0.042 Sum_probs=51.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc------CCceee-ccCccccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPS-LKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~------~~i~~~-~~D~~~~~~~D~Vi~~a~ 151 (268)
|||.|+|+|.+|..++..|... |+ +|..+++++++.+. +.. ...+.. ..|.++++++|+||.+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag 78 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCC
Confidence 5899999999999999999998 88 99999998765431 111 112222 235678999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 79 ~~~ 81 (294)
T 1oju_A 79 LAR 81 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00055 Score=62.42 Aligned_cols=71 Identities=17% Similarity=0.133 Sum_probs=54.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|... |++ |++.+|++.+.+.....++... .++ +.+.++|+|+.+++...
T Consensus 161 ~l~g~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 161 DIEGKTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEKVGARRV-ENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHHTTEEEC-SSHHHHHHTCSEEEECCCCST
T ss_pred cCCCCEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHhcCcEec-CCHHHHHhcCCEEEECCCCCh
Confidence 34567999999999999999999999 997 9999998765544444565532 233 46789999999888753
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00061 Score=64.33 Aligned_cols=66 Identities=15% Similarity=0.244 Sum_probs=51.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc-cc---cCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-EA---TQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~-~~---~~~~D~Vi~~a~~~ 153 (268)
|+|.|+|+|.+|..++..|.+. |++|++.+|++++.+.+.. .++... .|. +. ++++|+||.+.++.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~-~~~~e~v~~l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVLGA-HSLEEMVSKLKKPRRIILLVKAG 77 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEEC-SSHHHHHHHBCSSCEEEECSCTT
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhccccCCCeEEe-CCHHHHHhhccCCCEEEEeCCCh
Confidence 5799999999999999999999 9999999999887776654 344322 333 23 36899999988764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00029 Score=61.48 Aligned_cols=70 Identities=17% Similarity=0.084 Sum_probs=50.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Cc--eeeccCcccc-C-CCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GI--TPSLKWTEAT-Q-KFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i--~~~~~D~~~~-~-~~D~Vi~~a~~~~ 154 (268)
..++++|+|+|-+|+.++..|++. |.+|++..|+.++.+.+... +. .....|.+.+ . ++|+||++++...
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 457899999999999999999999 99999999997766554321 10 1112233334 3 8999999998654
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.001 Score=59.20 Aligned_cols=68 Identities=10% Similarity=0.024 Sum_probs=51.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhh----c------CCceeec-cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N------MGITPSL-KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~----~------~~i~~~~-~D~~~~~~~D~Vi~~a~ 151 (268)
++||.|+|+|.+|..++..|... |+ +|+..++++++.+... . ....... .|.+.++++|+||.+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDYADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 46899999999999999999999 98 9999999876654320 0 0112221 45578899999999997
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 82 ~p 83 (317)
T 2ewd_A 82 IP 83 (317)
T ss_dssp CS
T ss_pred CC
Confidence 53
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0021 Score=57.32 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchh----hhc------CCceeeccCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~----l~~------~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
++||.|+|+|.+|..++..|... + .+|..+++++++.+. +.. ..++....+.++++++|+||.+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~--~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ--SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCC
Confidence 46999999999999999999988 7 489999987644321 111 122233334578999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 84 ~~~ 86 (317)
T 3d0o_A 84 AAQ 86 (317)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00088 Score=59.99 Aligned_cols=67 Identities=15% Similarity=0.119 Sum_probs=50.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hhc------CCceeec-cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LIN------MGITPSL-KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~~------~~i~~~~-~D~~~~~~~D~Vi~~a~ 151 (268)
++||.|+|+|.+|..++..|... |+ +|..+++++++.+. +.. ...+... .|.++++++|+||.+++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 56999999999999999999998 88 99999998765432 111 1122222 46678999999999996
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 82 ~ 82 (322)
T 1t2d_A 82 F 82 (322)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00047 Score=64.99 Aligned_cols=67 Identities=16% Similarity=0.216 Sum_probs=51.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC----CceeeccCc-ccc---CCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EAT---QKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~----~i~~~~~D~-~~~---~~~D~Vi~~a~~~ 153 (268)
+++|.|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+... ++... .|. +.+ +++|+||.+.++.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~gi~~~-~s~~e~v~~l~~aDvVilavp~~ 79 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQDKNLVFT-KTLEEFVGSLEKPRRIMLMVQAG 79 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSCEEEC-SSHHHHHHTBCSSCEEEECCCTT
T ss_pred CCcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCcCCCeEEe-CCHHHHHhhccCCCEEEEEccCc
Confidence 36899999999999999999999 99999999988776665432 44322 233 333 3599999988764
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.001 Score=56.66 Aligned_cols=67 Identities=13% Similarity=0.094 Sum_probs=47.1
Q ss_pred CCCCeEEEEcc-----------------cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc-Cc------
Q 024417 82 VGENDLLIVGP-----------------GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK-WT------ 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-----------------G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~-D~------ 137 (268)
+..++|||||. |.+|..++++|.++ |++|+.+.+... .+. ..+++.... +.
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~--Ga~V~l~~~~~~-l~~--~~g~~~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS-LPT--PPFVKRVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC-CCC--CTTEEEEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC--CCEEEEEECCcc-ccc--CCCCeEEccCcHHHHHHH
Confidence 44578999975 89999999999999 999999887642 111 123333221 11
Q ss_pred --cccCCCCEEEEccCCC
Q 024417 138 --EATQKFPYVIFCAPPS 153 (268)
Q Consensus 138 --~~~~~~D~Vi~~a~~~ 153 (268)
+.+..+|++|++|+..
T Consensus 81 v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 81 VNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHGGGCSEEEECCBCC
T ss_pred HHHhcCCCCEEEECCccc
Confidence 1356899999999853
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00041 Score=61.20 Aligned_cols=55 Identities=25% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|++|.|+| +|.+|..+++.|.+. |++|++.+|+++.. ..+.+.++|+||.+.++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~~-------------~~~~~~~aDvVilavp~~ 76 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAV-------------AESILANADVVIVSVPIN 76 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGG-------------HHHHHTTCSEEEECSCGG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCcccC-------------HHHHhcCCCEEEEeCCHH
Confidence 56899999 999999999999999 99999999876421 013456677777666554
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0019 Score=64.60 Aligned_cols=134 Identities=13% Similarity=0.066 Sum_probs=83.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHH-hcCCCC-eEEEEeCCC---Ccch----hhhcCC--ceeeccCc---c-------cc-
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWR-QEHPGC-QIYGQTMTA---DHHD----ELINMG--ITPSLKWT---E-------AT- 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~-~~~~G~-~V~~~~R~~---~~~~----~l~~~~--i~~~~~D~---~-------~~- 140 (268)
.+.+||||+ |-||+.+++.|. ++ |. .|+.++|+. +..+ +++..| +..+.+|. + .+
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIER--GVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTS--SCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccceeeccCCCCcHHHHHHHHHHHc--CCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 467899996 999999999998 78 98 588899973 2222 233344 34455664 1 11
Q ss_pred --CCCCEEEEccCCCCCCC----hHHHHHHH-----------HHH-hcCCCeEEEEccCeee-cCCCCCCCCCCCCCCCC
Q 024417 141 --QKFPYVIFCAPPSRSLD----YPGDVRLA-----------ALS-WNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPI 201 (268)
Q Consensus 141 --~~~D~Vi~~a~~~~~~~----~~~~~~~~-----------~~~-~~gvkr~V~~SS~~vY-g~~~~~~~~E~~~~~p~ 201 (268)
...|+|||+|+...... -.+..+.. ... .... +||.+||..-+ |..
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~-------------- 672 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSG-------------- 672 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCS--------------
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCC--------------
Confidence 26899999999754322 12222222 111 1122 89999997543 321
Q ss_pred CCCHHHHHHHHHHHHHHHc---C--ceEEEeCceecCC
Q 024417 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYKAD 234 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~ 234 (268)
+...|+.+|...+.+.++. + .+.+-||.+-.++
T Consensus 673 g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 673 GQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence 1257999997666555443 3 6888899876553
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0003 Score=61.85 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec-cCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL-KWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~-~D~-~~~~~~D~Vi~~a~~~ 153 (268)
..++++|+|+|-+|+.++..|.+. |. +|++..|+.++.+.+.. .+.... .|. +.+.++|+||++.+..
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~-~~~~~~~~~~~~~~~~aDiVInaTp~G 186 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSL-NINKINLSHAESHLDEFDIIINTTPAG 186 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCS-CCEEECHHHHHHTGGGCSEEEECCC--
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHH-hcccccHhhHHHHhcCCCEEEECccCC
Confidence 357899999999999999999999 98 89999999887666543 222221 122 3577899999987654
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0033 Score=55.80 Aligned_cols=69 Identities=12% Similarity=0.046 Sum_probs=50.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC------Cceeec-cCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM------GITPSL-KWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~------~i~~~~-~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|..++..|.....|++|+.+++++++.+.+. .. ..+... .|.+.++++|+||.+++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l~~aDvViiav~~p 80 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHHCCCCEEEEeCCCC
Confidence 489999999999999999988412799999999887654321 10 111211 4555689999999999754
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00033 Score=62.01 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=52.3
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcC-Cc---eeecc-Cc-cccCCCCEEEEccCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-GI---TPSLK-WT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~-~i---~~~~~-D~-~~~~~~D~Vi~~a~~~~ 154 (268)
..++|+|+|+|-+|+.++..|++. |. +|++..|+.++.+.+.+. +. +.... +. +.+.++|+||++.+...
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCCEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 357899999999999999999999 98 999999998776555321 21 22211 22 35678999999998654
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00067 Score=62.17 Aligned_cols=67 Identities=21% Similarity=0.219 Sum_probs=54.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC------------------------c-
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW------------------------T- 137 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D------------------------~- 137 (268)
...+|+|+|+|-+|..+++.|+.. |.+|++.+|++++.+.+...|.+++..+ .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 356899999999999999999999 9999999999888777766666544311 1
Q ss_pred cccCCCCEEEEccC
Q 024417 138 EATQKFPYVIFCAP 151 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~ 151 (268)
+.+.++|+||.++.
T Consensus 261 e~l~~aDIVI~tv~ 274 (381)
T 3p2y_A 261 DAITKFDIVITTAL 274 (381)
T ss_dssp HHHTTCSEEEECCC
T ss_pred HHHhcCCEEEECCC
Confidence 36789999998864
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00032 Score=63.51 Aligned_cols=68 Identities=19% Similarity=0.149 Sum_probs=48.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchh----hhcC-----CceeeccCc-cccCCCCEEEEc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LINM-----GITPSLKWT-EATQKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~----l~~~-----~i~~~~~D~-~~~~~~D~Vi~~ 149 (268)
.++||.|+|+ |+||..++..|+.. | .+|..+|+++++.+. |... .+. ...|. ++++++|+||++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~--g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~-~t~d~~~al~dADvVvit 83 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMM--RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLT-FTSDIKEALTDAKYIVSS 83 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHT--TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCE-EESCHHHHHTTEEEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhc--CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceE-EcCCHHHHhCCCCEEEEc
Confidence 3679999997 99999999999988 7 589999997654332 2211 111 12344 578999999999
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
++..
T Consensus 84 aG~p 87 (343)
T 3fi9_A 84 GGAP 87 (343)
T ss_dssp CC--
T ss_pred cCCC
Confidence 9854
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00096 Score=57.05 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=48.2
Q ss_pred CCeEEEEc-----------------ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---------
Q 024417 84 ENDLLIVG-----------------PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------- 137 (268)
Q Consensus 84 m~kVLI~G-----------------aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------- 137 (268)
.++||||| .|.+|..++++++++ |++|+.+.|....... ...+++.+..+.
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~--Ga~V~lv~~~~~~~~~-~~~~~~~~~v~s~~em~~~v~ 79 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA--GYEVCLITTKRALKPE-PHPNLSIREITNTKDLLIEMQ 79 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT--TCEEEEEECTTSCCCC-CCTTEEEEECCSHHHHHHHHH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc-CCCCeEEEEHhHHHHHHHHHH
Confidence 46899984 479999999999999 9999999996532211 112444443321
Q ss_pred cccCCCCEEEEccCCCC
Q 024417 138 EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~~ 154 (268)
+.+.++|++|++|+...
T Consensus 80 ~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 80 ERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHGGGCSEEEECSBCCS
T ss_pred HhcCCCCEEEEcCcccc
Confidence 24578999999998643
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00042 Score=60.83 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=50.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-C--------ceeeccC-ccccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G--------ITPSLKW-TEATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~--------i~~~~~D-~~~~~~~D~Vi~~a~~ 152 (268)
..++++|+|+|-+|+.+++.|.++ | +|++.+|+.++.+.+... + +.....| .+.+.++|+||++++.
T Consensus 127 ~~k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~ 203 (287)
T 1nvt_A 127 KDKNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 203 (287)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCC
Confidence 357899999999999999999999 9 999999987655444211 0 0112223 2467889999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 204 ~~ 205 (287)
T 1nvt_A 204 GM 205 (287)
T ss_dssp TC
T ss_pred CC
Confidence 54
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00084 Score=57.83 Aligned_cols=62 Identities=18% Similarity=0.226 Sum_probs=41.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEE-EeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~-~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
.|+||.|+|+|.+|+.+++.+.++ ++++.+ ++|+++. ..++... .|.+.+.++|+||+++.|
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~~gv~v~-~dl~~l~~~DVvIDft~p 64 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----TTPYQQY-QHIADVKGADVAIDFSNP 64 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC-------CCSCBC-SCTTTCTTCSEEEECSCH
T ss_pred CceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----cCCCcee-CCHHHHhCCCEEEEeCCh
Confidence 378999999999999999999987 558776 5665442 1233222 333322288888877764
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00091 Score=60.29 Aligned_cols=68 Identities=19% Similarity=0.209 Sum_probs=53.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|+.. |++|++.+|+.++. .....|++. .++ +.++++|+|+.+.+...
T Consensus 163 l~g~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~-~~~~~g~~~--~~l~ell~~aDvV~l~~P~t~ 231 (335)
T 2g76_A 163 LNGKTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPE-VSASFGVQQ--LPLEEIWPLCDFITVHTPLLP 231 (335)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHH-HHHHTTCEE--CCHHHHGGGCSEEEECCCCCT
T ss_pred CCcCEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchh-hhhhcCcee--CCHHHHHhcCCEEEEecCCCH
Confidence 4457899999999999999999998 99999999976542 333446543 244 57889999999888754
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00046 Score=62.09 Aligned_cols=68 Identities=13% Similarity=0.221 Sum_probs=52.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
...++|.|+|.|.||+.+++.|+.. |++|++.+|++.+.+.....+++.. ++ +.++++|+|+.+.+.+
T Consensus 143 l~g~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~--~l~ell~~aDvV~l~~P~t 211 (330)
T 4e5n_A 143 LDNATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQRLGLRQV--ACSELFASSDFILLALPLN 211 (330)
T ss_dssp STTCEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHHHTEEEC--CHHHHHHHCSEEEECCCCS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHhcCceeC--CHHHHHhhCCEEEEcCCCC
Confidence 4567999999999999999999998 9999999998744433333455432 44 4678899999888754
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00035 Score=63.68 Aligned_cols=70 Identities=17% Similarity=0.113 Sum_probs=51.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCcee--eccCc----cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP--SLKWT----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~--~~~D~----~~~~~~D~Vi~~a~~~ 153 (268)
+..++|+|+|+|.||+.+++.|+.. |++|++++|++++.+.+.. .+... ...+. +.+.++|+||++++..
T Consensus 164 l~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 164 VAPASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 4457999999999999999999999 9999999998776554433 33321 11121 3567899999999854
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00078 Score=62.06 Aligned_cols=69 Identities=10% Similarity=-0.007 Sum_probs=53.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
...++|.|+|.|.||+.+++.|+.. |++|++.+|+....+.....+++.. .+. +.++++|+|+.+++..
T Consensus 189 l~gktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~~G~~~~-~~l~ell~~aDvV~l~~Plt 258 (393)
T 2nac_A 189 LEAMHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKELNLTWH-ATREDMYPVCDVVTLNCPLH 258 (393)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHGGGCSEEEECSCCC
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhhcCceec-CCHHHHHhcCCEEEEecCCc
Confidence 4567999999999999999999999 9999999998655433333455432 233 4778999999888754
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00067 Score=60.17 Aligned_cols=67 Identities=16% Similarity=0.138 Sum_probs=48.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhcC-----CceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~~-----~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|..++..|... |+ +|+.+++++++.+. +... ..+....|.+.++++|+||.+++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 4899999999999999999999 98 99999998654322 1111 1122224556899999999999643
|
| >3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0027 Score=59.65 Aligned_cols=69 Identities=10% Similarity=0.099 Sum_probs=51.1
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--------hhhcCCc-e-----------eeccCccccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--------ELINMGI-T-----------PSLKWTEATQK 142 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--------~l~~~~i-~-----------~~~~D~~~~~~ 142 (268)
.+++|.|+|+|.+|..++..|++. |++|++.++++++.. .+.+.+. . ....|++.+.+
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~~ 130 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLSN 130 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCTT
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHcc
Confidence 367999999999999999999999 999999999876321 1112221 0 11235567899
Q ss_pred CCEEEEccCCC
Q 024417 143 FPYVIFCAPPS 153 (268)
Q Consensus 143 ~D~Vi~~a~~~ 153 (268)
+|.||-+.+..
T Consensus 131 aDlVIeAVpe~ 141 (460)
T 3k6j_A 131 CDLIVESVIED 141 (460)
T ss_dssp CSEEEECCCSC
T ss_pred CCEEEEcCCCC
Confidence 99999988753
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00083 Score=60.28 Aligned_cols=69 Identities=22% Similarity=0.335 Sum_probs=51.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|..- |++|++.+|+++..+.+.. .....++ +.++++|+|+.+.+.+.
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~---~~~~~~l~ell~~aDvV~l~lPlt~ 203 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHFHE---TVAFTATADALATANFIVNALPLTP 203 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTCSE---EEEGGGCHHHHHHCSEEEECCCCCG
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhHhh---ccccCCHHHHHhhCCEEEEcCCCch
Confidence 44567999999999999999999999 9999999998765433211 1112233 46789999998887543
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00078 Score=60.08 Aligned_cols=69 Identities=13% Similarity=0.105 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|+.. |++|++.+|++++. .....|+.. .+. +.++++|+|+.+.+...
T Consensus 139 ~l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~-~~~~~g~~~--~~l~ell~~aDvVvl~~P~~~ 208 (313)
T 2ekl_A 139 ELAGKTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIRE-KAEKINAKA--VSLEELLKNSDVISLHVTVSK 208 (313)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHH-HHHHTTCEE--CCHHHHHHHCSEEEECCCCCT
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchh-HHHhcCcee--cCHHHHHhhCCEEEEeccCCh
Confidence 34567999999999999999999999 99999999987653 233456553 244 46789999999887654
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0034 Score=56.02 Aligned_cols=69 Identities=13% Similarity=0.127 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCC--Ccchh----hhc------CCceee-ccCccccCCCCEEEEc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA--DHHDE----LIN------MGITPS-LKWTEATQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~--~~~~~----l~~------~~i~~~-~~D~~~~~~~D~Vi~~ 149 (268)
++||.|+|+|.+|..++..|... |+ +|+.+++++ ++.+. +.. ...+.. ..|.+.++++|+||.+
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIia 85 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVIT 85 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEe
Confidence 46899999999999999999999 99 999999983 32221 111 111122 1356789999999999
Q ss_pred cCCCC
Q 024417 150 APPSR 154 (268)
Q Consensus 150 a~~~~ 154 (268)
++...
T Consensus 86 ag~p~ 90 (315)
T 3tl2_A 86 AGIAR 90 (315)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 98544
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0023 Score=57.38 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc-----CCceeeccCccccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
++||.|+|+|.+|..++..|+.. +. +|..+|+++++.+. +.. ..++....+.++++++|+||.+++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~ 86 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 46999999999999999999888 65 89999997654432 211 1222333445789999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 87 ~~ 88 (326)
T 2zqz_A 87 PQ 88 (326)
T ss_dssp C-
T ss_pred CC
Confidence 54
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00077 Score=60.85 Aligned_cols=66 Identities=12% Similarity=0.116 Sum_probs=39.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEe-CC-CCcchhhhcCCceeec--cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQT-MT-ADHHDELINMGITPSL--KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~-R~-~~~~~~l~~~~i~~~~--~D~~~~~~~D~Vi~~a~ 151 (268)
++||+|+|+ |++|+.|++.|.++ +|..+++.+. +. ..+.-.+ .+.+... .|.+...++|+||.|.+
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~--~g~~i~~~~~~~~~~~~~DvV~~a~g 77 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF--AESSLRVGDVDSFDFSSVGLAFFAAA 77 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE--TTEEEECEEGGGCCGGGCSEEEECSC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcccc--CCcceEEecCCHHHhcCCCEEEEcCC
Confidence 368999996 99999999999854 3455777664 32 2221111 1212111 12334567888887765
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00098 Score=63.24 Aligned_cols=67 Identities=13% Similarity=0.190 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc-cccC---CCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-EATQ---KFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~-~~~~---~~D~Vi~~a~~~ 153 (268)
.++|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+.. .++... .|+ +.+. ++|+||.+.++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~-~s~~e~v~~l~~aDvVil~Vp~~ 85 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAKGKSIIGA-TSIEDFISKLKRPRKVMLLVKAG 85 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTTTSSEECC-SSHHHHHHTSCSSCEEEECCCSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHcccccCCCeEEe-CCHHHHHhcCCCCCEEEEEcCCh
Confidence 35899999999999999999999 9999999999888776654 344322 233 3333 499999988764
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00057 Score=61.65 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=27.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcC-CCCeEEEEe
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQT 116 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~-~G~~V~~~~ 116 (268)
|+||.|.|+ |++|+.|++.|.++. |..+|+++.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~ 37 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLA 37 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEE
Confidence 679999995 999999999998751 467888776
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0012 Score=59.21 Aligned_cols=68 Identities=13% Similarity=0.243 Sum_probs=55.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccc-cCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEA-TQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~-~~~~D~Vi~~a~~~ 153 (268)
..+|||.|+|.||...++.++.. |.+|+++++++++.+.+++.|.+.+..|.+. .+++|+||.+++..
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~ 245 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTH 245 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSC
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcH
Confidence 45899999999999999999988 9999999999988888777777655444432 33899999998864
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0015 Score=58.66 Aligned_cols=67 Identities=19% Similarity=0.132 Sum_probs=50.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hhc------CCceeec-cCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LIN------MGITPSL-KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~~------~~i~~~~-~D~~~~~~~D~Vi~~a~ 151 (268)
++||.|+|+|.+|..++..|... |+ +|+..++++++.+. +.. ...+... .|.++++++|+||.+++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~VI~avg 91 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVVIITAG 91 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHHCCCCEEEEcCC
Confidence 36899999999999999999998 98 99999998776542 111 0111221 46678999999999986
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 92 ~ 92 (328)
T 2hjr_A 92 V 92 (328)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0045 Score=54.71 Aligned_cols=68 Identities=16% Similarity=0.014 Sum_probs=49.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcch----hhhc----CC--ceee-ccCccccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD----ELIN----MG--ITPS-LKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~----~l~~----~~--i~~~-~~D~~~~~~~D~Vi~~a~ 151 (268)
|||.|+|+|.||..++-.|+.+ +. ++..+|.++++.+ .|.. .+ .... ..|.+.++++|+||.+|+
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~--~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecC
Confidence 6899999999999999999887 54 8999998754322 1211 11 1122 235678999999999999
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
..+
T Consensus 79 ~pr 81 (294)
T 2x0j_A 79 LAR 81 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0016 Score=59.98 Aligned_cols=69 Identities=19% Similarity=0.263 Sum_probs=51.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhh-hcCCceeecc-Cc-cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL-INMGITPSLK-WT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l-~~~~i~~~~~-D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|-+|+.+++.|... |. +|++.+|++++...+ ...|.+.+.. +. +.+.++|+||.+.+...
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~~--G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~l~~~l~~aDvVi~at~~~~ 239 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPH 239 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSS
T ss_pred CCEEEEEChHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCceecHHhHHHHhcCCCEEEEccCCCC
Confidence 56899999999999999999999 98 999999987665333 2335543222 22 35679999999986543
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0011 Score=59.67 Aligned_cols=66 Identities=18% Similarity=0.188 Sum_probs=51.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|+|.||+.+++.|... |++|++.+|+++... ++.. ..|. +.++++|+|+.+.+...
T Consensus 161 ~l~g~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~-----g~~~-~~~l~ell~~aDvVil~vP~~~ 227 (333)
T 3ba1_A 161 KFSGKRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT-----NYTY-YGSVVELASNSDILVVACPLTP 227 (333)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC-----CSEE-ESCHHHHHHTCSEEEECSCCCG
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc-----Ccee-cCCHHHHHhcCCEEEEecCCCh
Confidence 34567899999999999999999998 999999999865432 3322 2344 46789999999888753
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.00077 Score=60.32 Aligned_cols=69 Identities=16% Similarity=0.102 Sum_probs=52.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|+.. |++|++.+| ++++. .....+++.. .+. +.+.++|+|+.+.+...
T Consensus 144 l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-~~~~~g~~~~-~~l~ell~~aDvVil~~p~~~ 214 (320)
T 1gdh_A 144 LDNKTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSS-DEASYQATFH-DSLDSLLSVSQFFSLNAPSTP 214 (320)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHH-HHHHHTCEEC-SSHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChh-hhhhcCcEEc-CCHHHHHhhCCEEEEeccCch
Confidence 4457899999999999999999998 999999999 77552 2233455432 234 46789999999887643
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.001 Score=58.84 Aligned_cols=66 Identities=18% Similarity=0.180 Sum_probs=51.0
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|... |++|++.+|+++..+. ++ ...++ +.++++|+|+.+.+.+.
T Consensus 119 ~l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~-----~~-~~~~l~ell~~aDiV~l~~P~t~ 185 (290)
T 3gvx_A 119 LLYGKALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQNV-----DV-ISESPADLFRQSDFVLIAIPLTD 185 (290)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTTC-----SE-ECSSHHHHHHHCSEEEECCCCCT
T ss_pred eeecchheeeccCchhHHHHHHHHhh--CcEEEEEecccccccc-----cc-ccCChHHHhhccCeEEEEeeccc
Confidence 34567999999999999999999999 9999999998655322 21 11233 46789999999888643
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0014 Score=58.46 Aligned_cols=69 Identities=12% Similarity=0.149 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc----C--CceeeccCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----M--GITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~----~--~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
++||.|+|+|.+|..++..|+.. +. +|+.+++++++.+. +.. . .++....+.++++++|+||.+++
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~--~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~~ 83 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG 83 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcCC
Confidence 57999999999999999999887 64 89999998653322 111 0 12222234568999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 84 ~~~ 86 (316)
T 1ldn_A 84 ANQ 86 (316)
T ss_dssp CCC
T ss_pred CCC
Confidence 644
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0066 Score=54.52 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=51.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhcC-----Cceee-ccCccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPS-LKWTEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~~-----~i~~~-~~D~~~~~~~D~Vi~~a 150 (268)
.++||.|+|+|.+|..++..|+.. |. +|..+++++++.+. +... ..... ..|.+.++++|+||.++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIita 97 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVITA 97 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEEeC
Confidence 467999999999999999999998 86 99999997654322 1110 11111 24666799999999999
Q ss_pred CCCC
Q 024417 151 PPSR 154 (268)
Q Consensus 151 ~~~~ 154 (268)
+...
T Consensus 98 G~p~ 101 (330)
T 3ldh_A 98 GARQ 101 (330)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8643
|
| >3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00044 Score=63.45 Aligned_cols=68 Identities=16% Similarity=0.077 Sum_probs=48.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHh-cCCCCeEEEEe---CCCCcchh-hhcCCc------------e------eeccCc-cc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQ-EHPGCQIYGQT---MTADHHDE-LINMGI------------T------PSLKWT-EA 139 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~-~~~G~~V~~~~---R~~~~~~~-l~~~~i------------~------~~~~D~-~~ 139 (268)
||||.|+|+|.+|..++..|.+ . |++|++++ |++++.+. +...+. + ....|. ++
T Consensus 2 ~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 79 (404)
T 3c7a_A 2 TVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEIA 79 (404)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTST--TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhCC--CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHHH
Confidence 5799999999999999999977 6 99999999 65544444 232221 1 011233 35
Q ss_pred cCCCCEEEEccCCC
Q 024417 140 TQKFPYVIFCAPPS 153 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (268)
+.++|+||.+.+..
T Consensus 80 ~~~aD~Vilav~~~ 93 (404)
T 3c7a_A 80 ISGADVVILTVPAF 93 (404)
T ss_dssp HTTCSEEEECSCGG
T ss_pred hCCCCEEEEeCchH
Confidence 77899999887653
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0034 Score=56.03 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=49.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc-----CCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||.|+|+|.+|..++..|... +. +|..+|+++++.+. +.. ..++....+.++++++|+||.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 6899999999999999999988 66 89999997654432 111 12223334457899999999999864
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 84 ~ 84 (318)
T 1ez4_A 84 Q 84 (318)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0014 Score=59.24 Aligned_cols=67 Identities=22% Similarity=0.147 Sum_probs=51.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
...++|.|+|.|.||+.+++.|+.- |++|++.+|.+...+.. .+++.. .++ +.++++|+|+.+.+.+
T Consensus 171 l~gktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~--~g~~~~-~~l~ell~~sDvV~l~~Plt 238 (345)
T 4g2n_A 171 LTGRRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALE--EGAIYH-DTLDSLLGASDIFLIAAPGR 238 (345)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHH--TTCEEC-SSHHHHHHTCSEEEECSCCC
T ss_pred cCCCEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhh--cCCeEe-CCHHHHHhhCCEEEEecCCC
Confidence 4457999999999999999999998 99999999986443221 144332 244 4778999999888764
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0015 Score=59.76 Aligned_cols=66 Identities=17% Similarity=0.169 Sum_probs=51.6
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--c------------------C------
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--K------------------W------ 136 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~------------------D------ 136 (268)
..++|+|+|+|-+|..+++.++.. |.+|++.+|++++.+.+...|.+... . |
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~--Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 356899999999999999999999 99999999998776665555654331 0 0
Q ss_pred --c-cccCCCCEEEEcc
Q 024417 137 --T-EATQKFPYVIFCA 150 (268)
Q Consensus 137 --~-~~~~~~D~Vi~~a 150 (268)
. +.+.++|+||+++
T Consensus 249 ~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 1 3567899999988
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0025 Score=57.58 Aligned_cols=96 Identities=13% Similarity=0.117 Sum_probs=57.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCCChH
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLDYP 159 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~~~ 159 (268)
....++|.|+|.|.||+.+++.|... |++|++.+|++++. .+... ..++ +.++++|+|+.+.+.+......
T Consensus 168 ~l~gktiGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~-----~~~~~-~~sl~ell~~aDvVil~vP~t~~t~~l 239 (340)
T 4dgs_A 168 SPKGKRIGVLGLGQIGRALASRAEAF--GMSVRYWNRSTLSG-----VDWIA-HQSPVDLARDSDVLAVCVAASAATQNI 239 (340)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCTT-----SCCEE-CSSHHHHHHTCSEEEECC---------
T ss_pred cccCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCcccc-----cCcee-cCCHHHHHhcCCEEEEeCCCCHHHHHH
Confidence 34567999999999999999999998 99999999976542 12221 2233 5788999999988754322110
Q ss_pred HHHHHHHHHhcCCCeEEEEccCeeec
Q 024417 160 GDVRLAALSWNGEGSFLFTSSSAIYD 185 (268)
Q Consensus 160 ~~~~~~~~~~~gvkr~V~~SS~~vYg 185 (268)
-. ...+.....-.-||-++...+-+
T Consensus 240 i~-~~~l~~mk~gailIN~aRG~vvd 264 (340)
T 4dgs_A 240 VD-ASLLQALGPEGIVVNVARGNVVD 264 (340)
T ss_dssp -C-HHHHHHTTTTCEEEECSCC----
T ss_pred hh-HHHHhcCCCCCEEEECCCCcccC
Confidence 00 11221222335677777666543
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0013 Score=59.30 Aligned_cols=67 Identities=19% Similarity=0.198 Sum_probs=43.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC---Cc---chh----hhcC-Cceeecc-Ccccc-CCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---DH---HDE----LINM-GITPSLK-WTEAT-QKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~---~~---~~~----l~~~-~i~~~~~-D~~~~-~~~D~Vi~~ 149 (268)
|+||.|+|+ |++|+.|++.|.++ |++++..+.... .. ... +... ...+... |.+.+ .++|+||.|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a 82 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLA 82 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEEC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEEC
Confidence 679999997 99999999988874 688998875433 21 111 1111 2222222 44444 788888877
Q ss_pred cC
Q 024417 150 AP 151 (268)
Q Consensus 150 a~ 151 (268)
.+
T Consensus 83 ~p 84 (337)
T 3dr3_A 83 TA 84 (337)
T ss_dssp SC
T ss_pred CC
Confidence 65
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.00081 Score=60.12 Aligned_cols=67 Identities=19% Similarity=0.146 Sum_probs=50.9
Q ss_pred CCCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc-cccCCCCEEEEccCCC
Q 024417 80 GGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 80 ~~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+....++|.|+|.|-||+.+++.|... |++|++.+|+++..+. +.... .++ +.++++|+|+.+.+.+
T Consensus 135 ~~l~g~tvGIiG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~-----~~~~~~~~~l~ell~~aDiV~l~~Plt 204 (315)
T 3pp8_A 135 YTREEFSVGIMGAGVLGAKVAESLQAW--GFPLRCWSRSRKSWPG-----VESYVGREELRAFLNQTRVLINLLPNT 204 (315)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCCCCTT-----CEEEESHHHHHHHHHTCSEEEECCCCC
T ss_pred CCcCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCchhhhh-----hhhhcccCCHHHHHhhCCEEEEecCCc
Confidence 344567999999999999999999999 9999999998765322 22221 123 4678999999888754
|
| >3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0035 Score=55.96 Aligned_cols=68 Identities=15% Similarity=0.054 Sum_probs=53.7
Q ss_pred CCeEEEEcccHHHHH-HHHHHHhcCCCCeEEEEeCCCC--cchhhhcCCceeecc-Ccccc--CCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTAD--HHDELINMGITPSLK-WTEAT--QKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~-L~~~L~~~~~G~~V~~~~R~~~--~~~~l~~~~i~~~~~-D~~~~--~~~D~Vi~~a~~~ 153 (268)
|++|.|+|.|-.|.. +++.|+++ |++|++.|+++. ..+.|++.|++...+ +.+.+ .++|.||...+..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~ 77 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAK 77 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcC
Confidence 789999999999996 99999999 999999998753 234577778887764 33444 5799999887643
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0055 Score=47.92 Aligned_cols=86 Identities=16% Similarity=0.243 Sum_probs=56.2
Q ss_pred CCCCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCC
Q 024417 82 VGENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 82 ~~m~kVLI~Ga----G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~ 156 (268)
+..++|.|+|+ |.+|..+++.|++. |++|+.+.++.+.. .|+..+ .+. +..+.+|.|+.+.++.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i-----~G~~~~-~s~~el~~~vDlvii~vp~~--- 80 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----EGLKCY-RSVRELPKDVDVIVFVVPPK--- 80 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECB-SSGGGSCTTCCEEEECSCHH---
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE-----CCeeec-CCHHHhCCCCCEEEEEeCHH---
Confidence 34568999998 99999999999999 99988877654222 355433 233 3456799999888752
Q ss_pred ChHHHHHHHHHHhcCCCeEEEEcc
Q 024417 157 DYPGDVRLAALSWNGEGSFLFTSS 180 (268)
Q Consensus 157 ~~~~~~~~~~~~~~gvkr~V~~SS 180 (268)
....+..-+ .+.|++.++..++
T Consensus 81 -~v~~v~~~~-~~~g~~~i~~~~~ 102 (138)
T 1y81_A 81 -VGLQVAKEA-VEAGFKKLWFQPG 102 (138)
T ss_dssp -HHHHHHHHH-HHTTCCEEEECTT
T ss_pred -HHHHHHHHH-HHcCCCEEEEcCc
Confidence 222222212 2367887766553
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00087 Score=63.25 Aligned_cols=66 Identities=17% Similarity=0.220 Sum_probs=50.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-C-------ceeeccCc-cc---cCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-------ITPSLKWT-EA---TQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~-------i~~~~~D~-~~---~~~~D~Vi~~a~~ 152 (268)
|+|.|+|+|.+|..++..|.+. |++|++.+|++++.+.+... + +. ...|. +. ++++|+||.+.++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~-~~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEECCCC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeE-EECCHHHHHhcccCCCEEEEecCC
Confidence 4799999999999999999999 99999999988776665432 3 22 12233 23 3369999999877
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 79 ~ 79 (478)
T 1pgj_A 79 G 79 (478)
T ss_dssp S
T ss_pred h
Confidence 4
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0011 Score=62.71 Aligned_cols=68 Identities=21% Similarity=0.217 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----------CCce------------eeccCcccc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGIT------------PSLKWTEAT 140 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----------~~i~------------~~~~D~~~~ 140 (268)
++||.|+|+|.+|..++..|++. |++|++.++++++.+.... .+.. ....|.+.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 56899999999999999999999 9999999998776544221 2210 112345678
Q ss_pred CCCCEEEEccCCC
Q 024417 141 QKFPYVIFCAPPS 153 (268)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (268)
.++|+||-+....
T Consensus 83 ~~aDlVIeAVpe~ 95 (483)
T 3mog_A 83 AAADLVIEAASER 95 (483)
T ss_dssp GGCSEEEECCCCC
T ss_pred cCCCEEEEcCCCc
Confidence 8999999988664
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0017 Score=58.30 Aligned_cols=68 Identities=18% Similarity=0.318 Sum_probs=50.3
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
....++|.|+|.|.||+.+++.|..- |++|++.+|++....... +. ....++ +.++++|+|+.+.+.+
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~--~~-~~~~~l~ell~~aDvV~l~lPlt 205 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHF--GMKVLGVSRSGRERAGFD--QV-YQLPALNKMLAQADVIVSVLPAT 205 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCTTCS--EE-ECGGGHHHHHHTCSEEEECCCCC
T ss_pred ccccceEEEEEECHHHHHHHHHHHhC--CCEEEEEcCChHHhhhhh--cc-cccCCHHHHHhhCCEEEEeCCCC
Confidence 44567999999999999999999999 999999999864432211 11 111233 4688999999888754
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00072 Score=58.53 Aligned_cols=64 Identities=20% Similarity=0.154 Sum_probs=49.3
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceee-ccCc-cccCCCCEEEEccCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPS-LKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~-~~D~-~~~~~~D~Vi~~a~~ 152 (268)
+++|+|+|-.|+.++..|++. |. +|++..|++++.+.+... .... ..+. +.+.++|+||++.+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~-~~~~~~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFP-VKIFSLDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSS-CEEEEGGGHHHHHHTCSEEEECSST
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHH-cccCCHHHHHhhhcCCCEEEECCCC
Confidence 899999999999999999999 98 999999998776655432 1111 1222 357789999998764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00087 Score=54.95 Aligned_cols=90 Identities=14% Similarity=0.164 Sum_probs=59.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc---c----cc--CCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---E----AT--QKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~---~----~~--~~~D~Vi~~a~ 151 (268)
.++|||+|+ |.||..+++.++.. |++|++++|++++.+.+...+.+... .+. + .. .++|+||++++
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 468999995 99999999999999 99999999987666555555543221 111 1 11 36999999986
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEccCe
Q 024417 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~ 182 (268)
.. .+...+.....-.++|.+++..
T Consensus 117 ~~-------~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 117 GE-------AIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp TH-------HHHHHHHTEEEEEEEEECSCGG
T ss_pred hH-------HHHHHHHHhccCCEEEEEcCCC
Confidence 31 2233321111224888887644
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0013 Score=60.64 Aligned_cols=66 Identities=18% Similarity=0.242 Sum_probs=52.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc----------------------------
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK---------------------------- 135 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~---------------------------- 135 (268)
..+|+|+|+|-+|...++.++.. |.+|++.++++++.+.+...|.++...
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 46899999999999999999999 999999999988776666556543221
Q ss_pred Cc-cccCCCCEEEEccC
Q 024417 136 WT-EATQKFPYVIFCAP 151 (268)
Q Consensus 136 D~-~~~~~~D~Vi~~a~ 151 (268)
++ +.++++|+||.++.
T Consensus 268 ~l~e~l~~aDVVI~tvl 284 (405)
T 4dio_A 268 LVAEHIAKQDIVITTAL 284 (405)
T ss_dssp HHHHHHHTCSEEEECCC
T ss_pred HHHHHhcCCCEEEECCc
Confidence 11 35689999999875
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00082 Score=61.02 Aligned_cols=97 Identities=14% Similarity=0.065 Sum_probs=63.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCCC-hH
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLD-YP 159 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~-~~ 159 (268)
...++|.|+|.|.||+.+++.|+.. |++|++.+|+.. .......+++.. .++ +.++++|+|+.+.+.+.... ..
T Consensus 158 l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~-~~~~~~~g~~~~-~~l~ell~~aDiV~l~~Plt~~t~~li 233 (352)
T 3gg9_A 158 LKGQTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENS-KERARADGFAVA-ESKDALFEQSDVLSVHLRLNDETRSII 233 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHH-HHHHHHTTCEEC-SSHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred CCCCEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCC-HHHHHhcCceEe-CCHHHHHhhCCEEEEeccCcHHHHHhh
Confidence 4467999999999999999999999 999999998742 222334566432 233 47789999998887654221 11
Q ss_pred HHHHHHHHHhcCCCeEEEEccCeee
Q 024417 160 GDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 160 ~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
+ ...+.....-.-||-+|...+-
T Consensus 234 ~--~~~l~~mk~gailIN~aRg~~v 256 (352)
T 3gg9_A 234 T--VADLTRMKPTALFVNTSRAELV 256 (352)
T ss_dssp C--HHHHTTSCTTCEEEECSCGGGB
T ss_pred C--HHHHhhCCCCcEEEECCCchhh
Confidence 0 1111122233567777765543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00041 Score=63.04 Aligned_cols=69 Identities=16% Similarity=0.072 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCce---eeccC---c-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKW---T-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~---~~~~D---~-~~~~~~D~Vi~~a~~~ 153 (268)
..++|+|+|+|-+|+.+++.|+.. |.+|++++|++++.+.+...+.. ....+ . +.+.++|+||++++..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 347899999999999999999999 99999999998776655433211 22112 1 3466899999998753
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0014 Score=59.73 Aligned_cols=69 Identities=10% Similarity=0.121 Sum_probs=50.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCcccc-CCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTEAT-QKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~~~~-~~~D~Vi~~a~~~ 153 (268)
+..++|+|+|.|-+|+.+++.|.+. |.+|++.++++++...+.. .+.+.+..+ +.+ .+||+++-|+...
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~--GakVvv~D~~~~~l~~~a~~~ga~~v~~~-~ll~~~~DIvip~a~~~ 241 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEGADAVAPN-AIYGVTCDIFAPCALGA 241 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCCEECCGG-GTTTCCCSEEEECSCSC
T ss_pred CCcCEEEEECchHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcCCEEEChH-HHhccCCcEeeccchHH
Confidence 3457899999999999999999999 9999999987765554433 244433222 223 4899999887543
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0015 Score=58.16 Aligned_cols=64 Identities=19% Similarity=0.148 Sum_probs=49.9
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|.||+.+++.|+.. |++|++.+|+.++.. +. ..+. +.++++|+|+.+.+...
T Consensus 141 ~l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~------~~--~~~l~ell~~aDvV~l~~p~~~ 205 (311)
T 2cuk_A 141 DLQGLTLGLVGMGRIGQAVAKRALAF--GMRVVYHARTPKPLP------YP--FLSLEELLKEADVVSLHTPLTP 205 (311)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSS------SC--BCCHHHHHHHCSEEEECCCCCT
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHC--CCEEEEECCCCcccc------cc--cCCHHHHHhhCCEEEEeCCCCh
Confidence 34567899999999999999999999 999999999875532 11 1233 46788999998887653
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0011 Score=57.24 Aligned_cols=64 Identities=20% Similarity=0.247 Sum_probs=50.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
+|+|+|+|.+|+.+++.|.+. |++|++.+|++++.+.+.. .+.+ ..+. +. .++|+||.+.+...
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~~~~--~~~~~~~-~~~Divi~~tp~~~ 183 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEFGLR--AVPLEKA-REARLLVNATRVGL 183 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHTCE--ECCGGGG-GGCSEEEECSSTTT
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccc--hhhHhhc-cCCCEEEEccCCCC
Confidence 899999999999999999999 9999999998766554432 2333 2233 35 88999999998764
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0025 Score=56.60 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCC-Ch
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSL-DY 158 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~-~~ 158 (268)
....++|.|+|.|.||+.+++.|+.. |++|++.+|+++ . . +... ..++ +.++++|+|+.+.+..... ..
T Consensus 121 ~l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~dr~~~-~-~----~~~~-~~~l~ell~~aDvV~l~~P~~~~t~~~ 191 (303)
T 1qp8_A 121 LIQGEKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPK-E-G----PWRF-TNSLEEALREARAAVCALPLNKHTRGL 191 (303)
T ss_dssp CCTTCEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCC-C-S----SSCC-BSCSHHHHTTCSEEEECCCCSTTTTTC
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcc-c-c----Cccc-CCCHHHHHhhCCEEEEeCcCchHHHHH
Confidence 34567999999999999999999999 999999999765 1 1 2111 1233 5788999999988765422 11
Q ss_pred HHHHHHHHHHhcCCCeEEEEccCeee
Q 024417 159 PGDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 159 ~~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
.+ ...+.....-.-+|-+|+..+.
T Consensus 192 i~--~~~l~~mk~gailin~srg~~v 215 (303)
T 1qp8_A 192 VK--YQHLALMAEDAVFVNVGRAEVL 215 (303)
T ss_dssp BC--HHHHTTSCTTCEEEECSCGGGB
T ss_pred hC--HHHHhhCCCCCEEEECCCCccc
Confidence 11 1122122223567777776554
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0013 Score=62.39 Aligned_cols=67 Identities=19% Similarity=0.223 Sum_probs=52.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
..++|+|+|+|.||..+++.|+.. |.+|++.++++.+.......|++. .+. +.+.++|+||.+.+..
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~~Ga~~--~~l~e~l~~aDvVi~atgt~ 340 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMMEGFDV--VTVEEAIGDADIVVTATGNK 340 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEE--CCHHHHGGGCSEEEECSSSS
T ss_pred CcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCEE--ecHHHHHhCCCEEEECCCCH
Confidence 357899999999999999999999 999999999876655444566653 233 4678899999887643
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0016 Score=58.96 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=51.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|+.. |++|++.+|..++.. ....|++.. .++ +.++++|+|+.+.+...
T Consensus 166 l~g~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~-~~~~g~~~~-~~l~ell~~aDvV~l~~P~t~ 235 (347)
T 1mx3_A 166 IRGETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGV-ERALGLQRV-STLQDLLFHSDCVTLHCGLNE 235 (347)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTH-HHHHTCEEC-SSHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhh-HhhcCCeec-CCHHHHHhcCCEEEEcCCCCH
Confidence 4467899999999999999999998 999999998765421 122344332 233 46788999998887653
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0024 Score=57.74 Aligned_cols=94 Identities=13% Similarity=0.128 Sum_probs=61.1
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCCC-hH
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLD-YP 159 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~-~~ 159 (268)
...++|.|+|.|.||+.+++.|+.- |++|++.+|.++.. . ..+++.. ++ +.++++|+|+.+.+.+.... ..
T Consensus 146 l~gktvgIiGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~--~-~~~~~~~--~l~ell~~aDvV~l~~Plt~~t~~li 218 (343)
T 2yq5_A 146 IYNLTVGLIGVGHIGSAVAEIFSAM--GAKVIAYDVAYNPE--F-EPFLTYT--DFDTVLKEADIVSLHTPLFPSTENMI 218 (343)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCGG--G-TTTCEEC--CHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred cCCCeEEEEecCHHHHHHHHHHhhC--CCEEEEECCChhhh--h-hcccccc--CHHHHHhcCCEEEEcCCCCHHHHHHh
Confidence 3457999999999999999999999 99999999987542 1 1223222 44 46789999999888653321 11
Q ss_pred HHHHHHHHHhcCCCeEEEEccCeee
Q 024417 160 GDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 160 ~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
+ ...+.....-.-||-+|...+-
T Consensus 219 ~--~~~l~~mk~gailIN~aRg~~v 241 (343)
T 2yq5_A 219 G--EKQLKEMKKSAYLINCARGELV 241 (343)
T ss_dssp C--HHHHHHSCTTCEEEECSCGGGB
T ss_pred h--HHHHhhCCCCcEEEECCCChhh
Confidence 0 1111122233566767655543
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0019 Score=58.77 Aligned_cols=34 Identities=18% Similarity=0.241 Sum_probs=28.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
++||.|+|+ |++|+.+++.|.++ |..+|+++.+.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elvai~~~ 50 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANH-PHFQVTLMTAD 50 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTC-SSEEEEEEBCS
T ss_pred CcEEEEECcCCHHHHHHHHHHHcC-CCcEEEEEeCc
Confidence 358999995 99999999999876 56799888654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 268 | |||
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.94 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.94 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.94 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.93 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.93 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.92 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.91 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.91 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.91 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.9 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.9 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.89 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.89 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.88 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.88 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.87 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.87 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.86 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.86 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.85 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.84 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.83 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.82 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.79 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.78 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.78 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.76 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.75 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.73 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.54 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.91 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.9 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.88 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.86 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.86 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.86 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.86 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.85 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.83 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.83 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.82 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.77 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.77 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.76 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.75 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.75 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.74 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.69 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.68 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.68 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.66 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.66 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.66 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.65 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.64 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.63 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.63 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.61 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.6 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.6 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.59 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.59 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.59 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.58 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.57 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.57 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.56 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.54 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.52 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.52 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.51 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.51 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.5 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.5 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.48 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.48 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.47 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.47 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.46 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.45 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.41 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.39 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.39 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.31 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.27 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.26 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.22 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 98.21 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 98.21 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 98.2 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 98.19 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.17 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.17 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.16 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.1 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 98.1 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 98.07 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 98.07 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 98.04 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.0 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 98.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 97.98 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.97 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.94 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.9 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.86 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.85 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.84 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.81 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.78 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.76 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.74 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.72 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.72 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.72 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.65 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.64 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.62 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.61 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.59 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.59 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.57 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.57 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.56 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 97.56 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.56 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.51 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.51 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.49 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 97.47 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.42 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.4 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.38 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.35 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.35 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.33 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.31 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.3 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.26 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.25 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.17 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.16 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.12 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 97.11 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.11 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.1 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.08 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 97.08 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 97.05 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.04 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.03 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.01 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.0 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.99 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.97 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.96 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 96.94 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 96.9 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.9 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.89 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.88 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.84 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.82 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.81 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.8 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.78 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.74 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.72 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.72 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.71 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.7 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.66 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.66 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.65 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.63 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.6 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 96.58 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.56 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.55 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.55 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.53 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.49 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.48 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.48 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.44 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.41 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.39 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.39 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.39 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.36 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.35 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.33 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.33 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.32 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.3 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 96.29 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.29 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.27 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.27 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.26 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.26 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 96.25 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.24 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.23 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.17 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.17 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 96.13 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.1 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 96.09 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.09 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.07 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.05 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 96.02 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 96.0 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 96.0 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.99 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.97 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.94 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.88 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 95.88 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.86 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 95.84 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.82 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.8 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.77 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.74 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.73 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.73 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.73 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 95.73 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.66 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 95.63 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.6 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.58 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 95.57 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.54 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.51 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 95.45 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 95.43 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 95.37 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.32 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.27 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 95.16 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 95.15 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 95.09 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 95.04 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 94.66 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 94.63 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.58 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.58 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 94.51 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 94.46 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 94.33 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 94.32 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 94.3 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 94.27 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.12 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 93.98 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 93.93 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 93.87 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 93.85 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 93.81 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.67 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 93.67 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 93.66 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 93.62 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 93.44 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 93.43 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.42 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.31 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.12 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 92.79 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 92.67 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 92.66 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.58 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 92.45 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 92.42 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 92.21 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 92.19 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 92.18 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 92.07 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 92.03 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.72 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.55 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 91.37 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 91.14 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 90.46 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 90.45 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 90.44 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 90.34 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 89.98 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 89.81 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 89.73 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 89.73 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 89.25 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 89.19 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.12 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 88.82 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 88.8 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 88.48 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 88.24 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 87.49 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 87.48 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 87.38 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 87.33 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 86.61 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 86.12 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 86.01 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 85.42 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 85.36 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 85.35 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.59 | |
| d2gjca1 | 311 | Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( | 84.44 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 84.19 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 84.17 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 83.96 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 83.88 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 83.59 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 83.34 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 83.3 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 82.99 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 82.86 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 82.63 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 82.22 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 82.1 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 81.61 | |
| d1ps9a2 | 162 | 2,4-dienoyl-CoA reductase, C-terminal domain {Esch | 81.5 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 81.28 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 81.24 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 81.23 | |
| d1ebfa1 | 168 | Homoserine dehydrogenase {Baker's yeast (Saccharom | 81.16 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 80.7 | |
| d1w4xa2 | 235 | Phenylacetone monooxygenase {Thermobifida fusca [T | 80.58 | |
| d1kdga1 | 360 | Flavoprotein domain of flavocytochrome cellobiose | 80.26 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 80.07 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=6.3e-27 Score=208.12 Aligned_cols=179 Identities=13% Similarity=0.099 Sum_probs=127.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchhhhc----CCceeeccCc--cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELIN----MGITPSLKWT--EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~l~~----~~i~~~~~D~--~~~~~~D~Vi~~a~~~~~ 155 (268)
+|||||||+ ||||++|+++|+++ |++|++++|... +.+.+.. ..++....|. ....++|+|||+|+....
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~ 78 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP 78 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCc
Confidence 379999997 99999999999999 999999987432 2222211 1222222332 245689999999986542
Q ss_pred ----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCC-----CCCCCCCCCHHHHHHHHHHHHH
Q 024417 156 ----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDED-----SPVVPIGRSPRTDVLLKAEKVI 217 (268)
Q Consensus 156 ----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~-----~~~~p~~~~~y~~sK~~aE~~l 217 (268)
.+ .+.++.+++ +++.++ |+||+||++|||.....+++|+ +|..|. +.|+.+|+++|+++
T Consensus 79 ~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~--~~Y~~sK~~~E~~~ 155 (312)
T d2b69a1 79 PNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPR--ACYDEGKRVAETMC 155 (312)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTT--HHHHHHHHHHHHHH
T ss_pred hhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCc--cHHHHHHHHHHHHH
Confidence 11 133455555 234454 8999999999997655555554 455565 78999999999999
Q ss_pred HHc----C--ceEEEeCceecCCCcH--------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 218 LEF----G--GCVLRLAGLYKADRGA--------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 218 ~~~----~--~tIlRp~~vyG~~~~~--------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.+ + ++++||+.+|||+... +...+..|+. ++.|.+.++|||++|+++++
T Consensus 156 ~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~ 222 (312)
T d2b69a1 156 YAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 222 (312)
T ss_dssp HHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred HHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHH
Confidence 765 2 7999999999986431 2223445553 47889999999999999986
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=7.8e-27 Score=211.18 Aligned_cols=179 Identities=19% Similarity=0.152 Sum_probs=129.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-----cchhh------hcCCceeeccCc---c----ccC--CC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-----HHDEL------INMGITPSLKWT---E----ATQ--KF 143 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-----~~~~l------~~~~i~~~~~D~---~----~~~--~~ 143 (268)
|+|||||+ ||||++|+++|+++ |++|++++|... +.+.+ ...+++.+.+|. + .+. ++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 57889996 99999999999999 999999999532 22211 123566666665 1 333 66
Q ss_pred CEEEEccCCCCCC----C-------hHHHHHHHH--HHhcC---CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 144 PYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
|+|+|+|+..... + .+.++.+++ +++.+ ++||||+||..|||.....+++|++++.|. ++|+
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~--~~Y~ 157 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPYA 157 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC--SHHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCC--ChHH
Confidence 9999999865422 1 133455555 23333 457999999999998767789999999887 8999
Q ss_pred HHHHHHHHHHHHcC------ceEEEeCceecCCCcH------H---HHHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 208 DVLLKAEKVILEFG------GCVLRLAGLYKADRGA------H---VYWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 208 ~sK~~aE~~l~~~~------~tIlRp~~vyG~~~~~------~---~~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|+++|++++.+. .+++||+++|||.... + ...+..+.. ++.+++.++|+|++|+|+++
T Consensus 158 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~ 236 (357)
T d1db3a_ 158 VAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQ 236 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHH
Confidence 99999999998752 7999999999995421 1 112333432 47889999999999999986
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.94 E-value=8e-27 Score=207.66 Aligned_cols=179 Identities=16% Similarity=0.129 Sum_probs=133.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEE------EEeCC--CCcch---hh-hcCCceeeccCc-------cccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIY------GQTMT--ADHHD---EL-INMGITPSLKWT-------EATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~------~~~R~--~~~~~---~l-~~~~i~~~~~D~-------~~~~~~D 144 (268)
|||||||+ ||||++|+++|+++ |++|. ++++. ..... .+ ...+++.+..|. .....+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~--g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAG--AYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--SCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence 58999996 99999999999999 88554 44432 11111 11 123566666664 2578999
Q ss_pred EEEEccCCCCCCC-----------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 024417 145 YVIFCAPPSRSLD-----------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (268)
Q Consensus 145 ~Vi~~a~~~~~~~-----------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~ 211 (268)
.|+|+|+...... .+.++.+++ ..+.++++|||+||+.+||.....+++|+++..|. +.|+.+|+
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~--~~Y~~sK~ 156 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN--SPYAASKA 156 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC--SHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC--CHHHHHHH
Confidence 9999998754211 123344554 24578999999999999998777789999999987 89999999
Q ss_pred HHHHHHHHcC------ceEEEeCceecCCCcH--H----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 212 KAEKVILEFG------GCVLRLAGLYKADRGA--H----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 212 ~aE~~l~~~~------~tIlRp~~vyG~~~~~--~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|.+++.+. ++++||+.+|||++.. + ..++.+|+. ++.|++.++|+|++|+|+++
T Consensus 157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai 227 (322)
T d1r6da_ 157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGI 227 (322)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHH
Confidence 9999987652 7999999999997542 1 233455553 47889999999999999986
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=1e-25 Score=201.83 Aligned_cols=180 Identities=17% Similarity=0.078 Sum_probs=136.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch---hh-------hcCCceeeccCc-------cccCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD---EL-------INMGITPSLKWT-------EATQKFP 144 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~---~l-------~~~~i~~~~~D~-------~~~~~~D 144 (268)
+|+|||||+ ||||++|+++|+++ |++|++++|.... .. .+ ....++.+.+|. ......+
T Consensus 16 ~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~ 93 (341)
T d1sb8a_ 16 PKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 93 (341)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence 578999996 99999999999999 9999999974321 11 11 113455566664 2567999
Q ss_pred EEEEccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 024417 145 YVIFCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (268)
Q Consensus 145 ~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~ 211 (268)
.|+|+++..... + .+++..+++ +...++++|||+||..+||.....+++|+++..|. +.|+.+|+
T Consensus 94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~ 171 (341)
T d1sb8a_ 94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL--SPYAVTKY 171 (341)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHHH
T ss_pred ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCC--CcchHHHH
Confidence 999999865421 1 133455555 34678999999999999998777789999999887 89999999
Q ss_pred HHHHHHHHcC------ceEEEeCceecCCCcH------H----HHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 212 KAEKVILEFG------GCVLRLAGLYKADRGA------H----VYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 212 ~aE~~l~~~~------~tIlRp~~vyG~~~~~------~----~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++|++++.+. ++|+||+.+||++..+ + ...+..|+. +++|.+.++|+|++|+|+++
T Consensus 172 ~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~ 246 (341)
T d1sb8a_ 172 VNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQAN 246 (341)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhh
Confidence 9999987653 7999999999986431 1 123445653 47889999999999999874
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.7e-25 Score=200.10 Aligned_cols=179 Identities=17% Similarity=0.069 Sum_probs=130.2
Q ss_pred CeE-EEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-----chhhh-------cCCceeeccCc---c----c--cC
Q 024417 85 NDL-LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGITPSLKWT---E----A--TQ 141 (268)
Q Consensus 85 ~kV-LI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-----~~~l~-------~~~i~~~~~D~---~----~--~~ 141 (268)
||| ||||+ ||||++|+++|+++ ||+|++++|.... .+.+. ..+++.+.+|. + . -.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 588 99997 99999999999999 9999999996432 22211 12456666664 1 2 24
Q ss_pred CCCEEEEccCCCCCC----C-------hHHHHHHHH--HHhcC---CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 142 KFPYVIFCAPPSRSL----D-------YPGDVRLAA--LSWNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~-------~~~~~~~~~--~~~~g---vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
++++|+|+++..... + .+.++.+++ +++.+ .++|||+||.+|||.....+++|++++.|. ++
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~--~~ 156 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR--SP 156 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC--SH
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC--CH
Confidence 788999998865421 1 122344444 23334 458999999999998767789999999887 89
Q ss_pred HHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------HHHH----HHcCC-c--cCCCCcccCcccHhhHhhc
Q 024417 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYW----LQKGT-V--DSRPDHILNLIHYELPSRL 266 (268)
Q Consensus 206 y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~----l~~g~-~--~~~g~~~~~~Ihv~DlA~a 266 (268)
|+.+|+++|++++.+ + ++++||+.+|||.... .... ...+. + ++.+++.++|+|++|++++
T Consensus 157 Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a 236 (347)
T d1t2aa_ 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEA 236 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHH
Confidence 999999999999875 2 7999999999996431 1111 12222 2 5788999999999999988
Q ss_pred c
Q 024417 267 Q 267 (268)
Q Consensus 267 i 267 (268)
+
T Consensus 237 ~ 237 (347)
T d1t2aa_ 237 M 237 (347)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.92 E-value=2e-24 Score=194.64 Aligned_cols=180 Identities=14% Similarity=0.033 Sum_probs=129.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~~~ 155 (268)
.|||||||+ ||||++|+++|+++ ||+|+++++.............+...+|. +.++++|+|||+|+....
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~ 92 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG 92 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence 468999996 99999999999999 99999998754432222223445555554 257899999999976543
Q ss_pred -----CC-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCC-------CCCCCCCCCCCCCHHHHHHHHHH
Q 024417 156 -----LD-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGA-------CDEDSPVVPIGRSPRTDVLLKAE 214 (268)
Q Consensus 156 -----~~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~-------~~E~~~~~p~~~~~y~~sK~~aE 214 (268)
.. .+.++.+++ .+..++++|||+||..+|+.....+ .+|+.+..|. +.|+.+|+++|
T Consensus 93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~--~~Yg~sK~~~E 170 (363)
T d2c5aa1 93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ--DAFGLEKLATE 170 (363)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS--SHHHHHHHHHH
T ss_pred ccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCC--CHHHHHHHHHH
Confidence 11 123344444 3568999999999999998643322 3455566676 89999999999
Q ss_pred HHHHHc----C--ceEEEeCceecCCCcH-------HHH----HHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 215 KVILEF----G--GCVLRLAGLYKADRGA-------HVY----WLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 215 ~~l~~~----~--~tIlRp~~vyG~~~~~-------~~~----~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++++ + ++++||+++||+++.. ... ....... ++.|.+.++|+|++|+++++
T Consensus 171 ~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~ 243 (363)
T d2c5aa1 171 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 243 (363)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHH
Confidence 998765 3 7999999999986531 111 1112221 57788999999999999875
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.91 E-value=1.9e-24 Score=193.98 Aligned_cols=181 Identities=10% Similarity=0.078 Sum_probs=129.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC-------CcchhhhcCCceeeccCc-------cccCCCCEEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------DHHDELINMGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~-------~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
.||||||||+ ||||++|+++|+++ |++|.++.++. .....+...+++.+.+|. +.+.++|.|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~--g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~ 78 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNN--HPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIV 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--CTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHC--CCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhh
Confidence 3899999996 99999999999999 88765554421 112223345677777775 2578999999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH-HHhcCCCeEEEEccCeeecCC------------CCCCCCCCCCCCCCCC
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA-LSWNGEGSFLFTSSSAIYDCS------------DNGACDEDSPVVPIGR 203 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~-~~~~gvkr~V~~SS~~vYg~~------------~~~~~~E~~~~~p~~~ 203 (268)
|+|+..... + ...++.+++ .......++|++||..+||.. ....++|+++..|.
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-- 156 (346)
T d1oc2a_ 79 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-- 156 (346)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC--
T ss_pred hhhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCC--
Confidence 999875421 1 123344554 122223689999999999731 12457788888887
Q ss_pred CHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc---HHH---HHHHcCC-c--cCCCCcccCcccHhhHhhcc
Q 024417 204 SPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---AHV---YWLQKGT-V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~---~~~---~~l~~g~-~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+.|+.+|+++|++++.+ + ++++||+.+|||... ... .++..|. + ++.+++.++|+|++|+|+++
T Consensus 157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~ 235 (346)
T d1oc2a_ 157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHH
Confidence 89999999999998765 3 799999999998643 222 2333444 3 57899999999999999986
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.5e-24 Score=179.28 Aligned_cols=167 Identities=14% Similarity=0.038 Sum_probs=130.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
|.|+||+|+|+ |+||++++++|+++ ||+|++++|++++.+.....+++.+.+|. ++++++|+|||+++..
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~ 78 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccC
Confidence 45899999997 99999999999999 99999999998887666667888888885 2689999999999865
Q ss_pred CCCC----hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEE
Q 024417 154 RSLD----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVL 225 (268)
Q Consensus 154 ~~~~----~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIl 225 (268)
...+ +.+..++++ +++.+++|||++||.++|+.... . +.....|...|.++|+++++.+ |||+
T Consensus 79 ~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~------~---~~~~~~~~~~~~~~e~~l~~~~~~~tii 149 (205)
T d1hdoa_ 79 NDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK------V---PPRLQAVTDDHIRMHKVLRESGLKYVAV 149 (205)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC------S---CGGGHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc------c---cccccccchHHHHHHHHHHhcCCceEEE
Confidence 4321 455566665 36779999999999988764321 1 1111467889999999999987 8999
Q ss_pred EeCceecCCCcHHHHHHHcCC--ccCCCCcccCcccHhhHhhcc
Q 024417 226 RLAGLYKADRGAHVYWLQKGT--VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 226 Rp~~vyG~~~~~~~~~l~~g~--~~~~g~~~~~~Ihv~DlA~ai 267 (268)
||+.+++.... +. ....+.....+|+++|+|+++
T Consensus 150 rp~~~~~~~~~--------~~~~~~~~~~~~~~~i~~~DvA~~~ 185 (205)
T d1hdoa_ 150 MPPHIGDQPLT--------GAYTVTLDGRGPSRVISKHDLGHFM 185 (205)
T ss_dssp CCSEEECCCCC--------SCCEEESSSCSSCSEEEHHHHHHHH
T ss_pred ecceecCCCCc--------ccEEEeeCCCCCCCcCCHHHHHHHH
Confidence 99999865321 22 234566778899999999976
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=1e-23 Score=186.42 Aligned_cols=179 Identities=16% Similarity=0.036 Sum_probs=130.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhc----CCceeeccCc---c------ccCCCCEEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELIN----MGITPSLKWT---E------ATQKFPYVIF 148 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~----~~i~~~~~D~---~------~~~~~D~Vi~ 148 (268)
|+|||||+ ||||++|+++|+++ ||+|++++|.... ...+.. .+++.+.+|. + .....++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 58999997 99999999999999 9999999996533 222322 3456666665 1 1236778888
Q ss_pred ccCCCCCC----C-------hHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 024417 149 CAPPSRSL----D-------YPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (268)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE 214 (268)
++...... + .+.++.+++ .++.+ .++|++.||..+||.....+.+|+++..|. ++|+.+|+.+|
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E 156 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--SPYGVAKLYGH 156 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc--ChhHHHHHHHH
Confidence 88764321 1 123344554 23444 568999999999988777789999999887 89999999999
Q ss_pred HHHHHcC------ceEEEeCceecCCCcH------HH---HHHHcCC--c--cCCCCcccCcccHhhHhhcc
Q 024417 215 KVILEFG------GCVLRLAGLYKADRGA------HV---YWLQKGT--V--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 215 ~~l~~~~------~tIlRp~~vyG~~~~~------~~---~~l~~g~--~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++..+. .+++||+++|||.... +. .++..+. . +++|++.++|+|++|+|+++
T Consensus 157 ~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~ 228 (321)
T d1rpna_ 157 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAM 228 (321)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHH
T ss_pred HHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHH
Confidence 9987653 6999999999995321 11 1223332 2 57889999999999999986
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.90 E-value=3.7e-24 Score=193.94 Aligned_cols=179 Identities=13% Similarity=0.069 Sum_probs=125.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEE-EEeCCCC--cch---hh-hcCCceeeccCc---c----cc--CCCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIY-GQTMTAD--HHD---EL-INMGITPSLKWT---E----AT--QKFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~-~~~R~~~--~~~---~l-~~~~i~~~~~D~---~----~~--~~~D~Vi 147 (268)
|||||||+ ||||++|+++|+++ |++|+ ++++... ... .+ ...+++.+.+|. + .+ .++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 58999996 99999999999999 99755 5554221 111 12 123567777774 1 22 3799999
Q ss_pred EccCCCCCCC-----------hHHHHHHHH--HH---------hcCCCeEEEEccCeeecCCCCC----------CCCCC
Q 024417 148 FCAPPSRSLD-----------YPGDVRLAA--LS---------WNGEGSFLFTSSSAIYDCSDNG----------ACDED 195 (268)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~~~--~~---------~~gvkr~V~~SS~~vYg~~~~~----------~~~E~ 195 (268)
|||+...... .+.++.+++ +. ..++++|||+||..|||..... ...|+
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~ 158 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence 9999754211 122333443 11 1246799999999999864321 24466
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------HHHHHHcCCc---cCCCCcccCcccH
Q 024417 196 SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------HVYWLQKGTV---DSRPDHILNLIHY 260 (268)
Q Consensus 196 ~~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------~~~~l~~g~~---~~~g~~~~~~Ihv 260 (268)
++..|. +.|+.+|+++|++++.+ + ++++||+.+|||++.. +...+.+|+. .+.|++.++|+|+
T Consensus 159 ~~~~p~--s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v 236 (361)
T d1kewa_ 159 TAYAPS--SPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp SCCCCC--SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence 666676 89999999999999875 3 7999999999997531 2233455654 4788999999999
Q ss_pred hhHhhcc
Q 024417 261 ELPSRLQ 267 (268)
Q Consensus 261 ~DlA~ai 267 (268)
+|+|+++
T Consensus 237 ~D~a~ai 243 (361)
T d1kewa_ 237 EDHARAL 243 (361)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=3e-23 Score=185.60 Aligned_cols=179 Identities=16% Similarity=0.094 Sum_probs=127.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc----ch---hhhcCCceeeccCc---c----ccC--CCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HD---ELINMGITPSLKWT---E----ATQ--KFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~----~~---~l~~~~i~~~~~D~---~----~~~--~~D~Vi 147 (268)
|||||||+ ||||++|+++|+++ |++|++++|-... .. .+...+++++.+|. + .++ ++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 57999997 99999999999999 9999999873221 11 22345688887775 1 333 899999
Q ss_pred EccCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC-CCCCCCCHHHHHHHHH
Q 024417 148 FCAPPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRTDVLLKA 213 (268)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~-~~p~~~~~y~~sK~~a 213 (268)
|+|+....+ + .+.++.+++ .++.+++++|++||..+|+.....+..|+++ ..|. +.|+.+|..+
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~--~~Y~~sK~~~ 156 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ--SPYGKSKLMV 156 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS--SHHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCc--chHHHHHhhh
Confidence 999865421 1 234455555 2457899999999999998765555555554 4555 8999999999
Q ss_pred HHHHHHc-----C--ceEEEeCceecCCCc------------HHHHH----HH-cCCc---------cCCCCcccCcccH
Q 024417 214 EKVILEF-----G--GCVLRLAGLYKADRG------------AHVYW----LQ-KGTV---------DSRPDHILNLIHY 260 (268)
Q Consensus 214 E~~l~~~-----~--~tIlRp~~vyG~~~~------------~~~~~----l~-~g~~---------~~~g~~~~~~Ihv 260 (268)
|+++.++ + .+++||+.+||+... .+... +. .+.+ ...+.+.++|+|+
T Consensus 157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v 236 (338)
T d1udca_ 157 EQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_dssp HHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEH
T ss_pred hHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEE
Confidence 9998753 2 689999999998532 11111 11 1221 2347788999999
Q ss_pred hhHhhcc
Q 024417 261 ELPSRLQ 267 (268)
Q Consensus 261 ~DlA~ai 267 (268)
+|+++++
T Consensus 237 ~D~~~~~ 243 (338)
T d1udca_ 237 MDLADGH 243 (338)
T ss_dssp HHHHHHH
T ss_pred eehhhhc
Confidence 9998653
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.89 E-value=5.7e-23 Score=182.68 Aligned_cols=179 Identities=14% Similarity=0.043 Sum_probs=125.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-----cchhh-------hcCCceeeccCcc---------ccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-----HHDEL-------INMGITPSLKWTE---------ATQ 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-----~~~~l-------~~~~i~~~~~D~~---------~~~ 141 (268)
+|++||||+ ||||++|+++|+++ ||+|++++|... +...+ ....++.+.+|.. ...
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~ 78 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI 78 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh
Confidence 368999997 99999999999999 999999999533 22221 1223445556641 124
Q ss_pred CCCEEEEccCCCCCC----C-------hHHHHHHHH-------HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL----D-------YPGDVRLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~-------~~~~~~~~~-------~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
++|+|||+|+..... + ...++.+++ .......++++.||..+|+.. ...++|++|..|.
T Consensus 79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~-~~~~~E~~~~~p~-- 155 (339)
T d1n7ha_ 79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGST-PPPQSETTPFHPR-- 155 (339)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTS-CSSBCTTSCCCCC--
T ss_pred ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccC-CCCCCCCCCCCCc--
Confidence 789999999975431 1 111122222 122345678899988888754 4578999999887
Q ss_pred CHHHHHHHHHHHHHHHcC------ceEEEeCceecCCCcH------HHH---HHHcCC--c--cCCCCcccCcccHhhHh
Q 024417 204 SPRTDVLLKAEKVILEFG------GCVLRLAGLYKADRGA------HVY---WLQKGT--V--DSRPDHILNLIHYELPS 264 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~~------~tIlRp~~vyG~~~~~------~~~---~l~~g~--~--~~~g~~~~~~Ihv~DlA 264 (268)
+.|+.+|+.+|+++..+. ++++||+++|||.... +.. ....+. . .+.+.+.++|+|++|+|
T Consensus 156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a 235 (339)
T d1n7ha_ 156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV 235 (339)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence 899999999999987653 6999999999996421 111 122222 2 46788999999999999
Q ss_pred hcc
Q 024417 265 RLQ 267 (268)
Q Consensus 265 ~ai 267 (268)
+++
T Consensus 236 ~~~ 238 (339)
T d1n7ha_ 236 EAM 238 (339)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=5.1e-23 Score=181.58 Aligned_cols=177 Identities=15% Similarity=0.082 Sum_probs=122.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCCCC-----C
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL-----D 157 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~-----~ 157 (268)
+|||||||+ ||||++|+++|+++ |++|+++++..+ .+......++ +.-....+|.|+|+|+..... +
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~~-~~~~~~~~~~----~~~~~~~~d~v~~~a~~~~~~~~~~~~ 74 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDE-LNLLDSRAVH----DFFASERIDQVYLAAAKVGGIVANNTY 74 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTT-CCTTCHHHHH----HHHHHHCCSEEEECCCCCCCHHHHHHC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCchh-ccccCHHHHH----HHHhhcCCCEEEEcchhccccccchhh
Confidence 468999997 99999999999999 999987765322 1111000000 000234689999999765421 1
Q ss_pred -------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC--C-CCHHHHHHHHHHHHHHHcC----
Q 024417 158 -------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI--G-RSPRTDVLLKAEKVILEFG---- 221 (268)
Q Consensus 158 -------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~--~-~~~y~~sK~~aE~~l~~~~---- 221 (268)
.+.++.+++ +.+.+++||||+||.+|||.....+++|+.+.... . .++|+.+|+++|++++.+.
T Consensus 75 ~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g 154 (315)
T d1e6ua_ 75 PADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG 154 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 123344554 34678999999999999998766678887664321 1 1479999999999998653
Q ss_pred --ceEEEeCceecCCCcH------HH---------HHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 222 --GCVLRLAGLYKADRGA------HV---------YWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 --~tIlRp~~vyG~~~~~------~~---------~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
.+|+||+++|||+..+ .. ....++.. .+.+.+.++|+|++|+++++
T Consensus 155 l~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~ 220 (315)
T d1e6ua_ 155 RDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAAS 220 (315)
T ss_dssp CEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHH
T ss_pred CCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHH
Confidence 6999999999996431 00 11223332 46788999999999999875
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=2.3e-22 Score=179.44 Aligned_cols=181 Identities=15% Similarity=0.110 Sum_probs=128.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhh-hcCCceeeccCc-------c-ccCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDEL-INMGITPSLKWT-------E-ATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l-~~~~i~~~~~D~-------~-~~~~~D~Vi~~a~~~ 153 (268)
|||||||+ ||||++|+++|+++ | ++|+++++.......+ ...+++++.+|. + ..+++|+|||+|+..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~--g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS--TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence 58999997 99999999999999 8 4899999876554443 335677887774 1 456899999999976
Q ss_pred CCCC-----------hHHHHHHHHH-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC-----CCCCHHHHHHHHHHHH
Q 024417 154 RSLD-----------YPGDVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP-----IGRSPRTDVLLKAEKV 216 (268)
Q Consensus 154 ~~~~-----------~~~~~~~~~~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p-----~~~~~y~~sK~~aE~~ 216 (268)
.... .+.++.+++. ......+++|.||..+|+.......+|..+..+ .+.+.|+.+|..+|++
T Consensus 79 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~ 158 (342)
T d2blla1 79 TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV 158 (342)
T ss_dssp CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred cccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchhhh
Confidence 4321 1233444442 223345778999999998765544444433211 1126799999999999
Q ss_pred HHHcC------ceEEEeCceecCCCcH--------------HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 217 ILEFG------GCVLRLAGLYKADRGA--------------HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 217 l~~~~------~tIlRp~~vyG~~~~~--------------~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
++.+. .+++||+.+||+.... +...+..|+. ++.|++.++|+|++|+|+++
T Consensus 159 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~ 232 (342)
T d2blla1 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEAL 232 (342)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHH
T ss_pred hhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccccccccee
Confidence 97652 7999999999985321 1223445653 57889999999999999886
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.2e-22 Score=172.98 Aligned_cols=168 Identities=17% Similarity=0.078 Sum_probs=118.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~ 152 (268)
.+++|||+|+ ||||++|+++|+++ |. +|++++|++.+........++...+|. +.++++|+||||++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~--g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~ 90 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGT 90 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCCCEEEEEecChhhhcccccceeeeeeecccccccccccccccccccccccc
Confidence 3468999997 99999999999999 74 899999987654433334555555554 367899999999986
Q ss_pred CCCCC----h----HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 153 SRSLD----Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 153 ~~~~~----~----~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
..... + .+...+++ +.+.++++|||+||..+|+.. . +.|+++|.++|+.+++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~-------------~--~~Y~~~K~~~E~~l~~~~~ 155 (232)
T d2bkaa1 91 TRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS-------------N--FLYLQVKGEVEAKVEELKF 155 (232)
T ss_dssp CHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------------S--SHHHHHHHHHHHHHHTTCC
T ss_pred cccccchhhhhhhcccccceeeecccccCccccccCCccccccCc-------------c--chhHHHHHHhhhccccccc
Confidence 53211 1 11223333 356789999999998775432 1 689999999999999986
Q ss_pred --ceEEEeCceecCCCcH-HHHHHHcC--CccCCCCcccCcccHhhHhhcc
Q 024417 222 --GCVLRLAGLYKADRGA-HVYWLQKG--TVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 --~tIlRp~~vyG~~~~~-~~~~l~~g--~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++|+||+.+||++... ...++... .....+......||++|+|+++
T Consensus 156 ~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~ 206 (232)
T d2bkaa1 156 DRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAM 206 (232)
T ss_dssp SEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHH
T ss_pred cceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHH
Confidence 7999999999986432 11111110 1123344455679999999986
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.87 E-value=3.5e-22 Score=179.04 Aligned_cols=146 Identities=16% Similarity=0.147 Sum_probs=110.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-c------hhhhcCCceeeccCc---c------ccCCCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-H------DELINMGITPSLKWT---E------ATQKFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~------~~l~~~~i~~~~~D~---~------~~~~~D~Vi 147 (268)
|.|||||+ ||||++|+++|+++ |++|+++++-... . +.+...+++++.+|. + ...++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 46999997 99999999999999 9999999863221 1 223345677777775 1 134899999
Q ss_pred EccCCCCCCC-----------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC----CCCCCCCCCCCCCCCCHHHHHH
Q 024417 148 FCAPPSRSLD-----------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD----NGACDEDSPVVPIGRSPRTDVL 210 (268)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~----~~~~~E~~~~~p~~~~~y~~sK 210 (268)
|+|+...... .+.+..+++ .++.++++|||+||..|||... ..+++|+.+..|. +.|+.+|
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~--~~Y~~sK 157 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT--NPYGHTK 157 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC--SHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC--ChhHhHH
Confidence 9999754211 122334444 3567899999999999998542 3568999988887 8999999
Q ss_pred HHHHHHHHHc------C--ceEEEeCceecCC
Q 024417 211 LKAEKVILEF------G--GCVLRLAGLYKAD 234 (268)
Q Consensus 211 ~~aE~~l~~~------~--~tIlRp~~vyG~~ 234 (268)
+.+|++++++ + ++++||+.+||+.
T Consensus 158 ~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~ 189 (347)
T d1z45a2 158 YAIENILNDLYNSDKKSWKFAILRYFNPIGAH 189 (347)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred HHHHHHHHHHHHhhccCCcEEEEeecceEeec
Confidence 9999988764 1 6999999999874
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.87 E-value=2.1e-21 Score=176.21 Aligned_cols=149 Identities=15% Similarity=0.156 Sum_probs=106.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC---C------Ccchh----h----------hcCCceeeccCc---
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---A------DHHDE----L----------INMGITPSLKWT--- 137 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~---~------~~~~~----l----------~~~~i~~~~~D~--- 137 (268)
|||||||+ ||||++|+++|+++ .|++|+++|+- . +..+. + ....+..+.+|.
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~-~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRD-TNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH-CCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHh-CCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 49999996 99999999999863 18999999741 1 00000 0 012344555664
Q ss_pred c-------ccCCCCEEEEccCCCCCCC-----------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCC-------CC
Q 024417 138 E-------ATQKFPYVIFCAPPSRSLD-----------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSD-------NG 190 (268)
Q Consensus 138 ~-------~~~~~D~Vi~~a~~~~~~~-----------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~-------~~ 190 (268)
+ ...++|+|||+|+...... ...++.+++ .+..++++++++||..+|+... ..
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 1 2357899999999764321 122333443 3567899999999999997542 23
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC------ceEEEeCceecCCCc
Q 024417 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEFG------GCVLRLAGLYKADRG 236 (268)
Q Consensus 191 ~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~------~tIlRp~~vyG~~~~ 236 (268)
++.|+++..|. +.|+.+|+.+|++++++. ++++||+.+|||+..
T Consensus 162 ~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~ 211 (383)
T d1gy8a_ 162 PIDINAKKSPE--SPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED 211 (383)
T ss_dssp CBCTTSCCBCS--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred ccccccCCCCC--CHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence 67888888887 899999999999998753 799999999999753
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.86 E-value=1.5e-21 Score=174.81 Aligned_cols=180 Identities=16% Similarity=0.020 Sum_probs=122.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CC-ceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MG-ITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~-i~~~~~D~-------~~~~~~D~Vi 147 (268)
.++|||||+ ||||++|+++|+++ |++|++++|+..+...+.. .. ...+.+|. +++.++|+|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~ 88 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred cCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhh
Confidence 479999996 99999999999999 9999999998655443321 11 12234453 3678999999
Q ss_pred EccCCCCCCC--------hHHHHHHHHH--Hh-cCCCeEEEEccCeeecCCC----CCC----------------CCCCC
Q 024417 148 FCAPPSRSLD--------YPGDVRLAAL--SW-NGEGSFLFTSSSAIYDCSD----NGA----------------CDEDS 196 (268)
Q Consensus 148 ~~a~~~~~~~--------~~~~~~~~~~--~~-~gvkr~V~~SS~~vYg~~~----~~~----------------~~E~~ 196 (268)
|+++...... .+.++.+++. .+ .++++|||+||+.+++... +.. ..|+.
T Consensus 89 ~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~ 168 (342)
T d1y1pa1 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred hhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccC
Confidence 9999755432 2334555552 23 4799999999986543211 112 23344
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc----C----ceEEEeCceecCCCc------H---HHHHHHcCCc--cCCCCcccCc
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYKADRG------A---HVYWLQKGTV--DSRPDHILNL 257 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~----~----~tIlRp~~vyG~~~~------~---~~~~l~~g~~--~~~g~~~~~~ 257 (268)
+..|. ++|+.+|+.+|++++.+ + .+++||+.+|||... . ....+.+|.. ...+++.++|
T Consensus 169 ~~~p~--~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~ 246 (342)
T d1y1pa1 169 PQKSL--WVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246 (342)
T ss_dssp TTHHH--HHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEE
T ss_pred CCCCc--CcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceee
Confidence 44444 57999999999977654 2 578899999998532 1 1223455553 3346677899
Q ss_pred ccHhhHhhcc
Q 024417 258 IHYELPSRLQ 267 (268)
Q Consensus 258 Ihv~DlA~ai 267 (268)
+|++|+|+++
T Consensus 247 v~v~Dva~~~ 256 (342)
T d1y1pa1 247 VSAVDIGLLH 256 (342)
T ss_dssp EEHHHHHHHH
T ss_pred eeHHHHHHHH
Confidence 9999999874
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.86 E-value=1.2e-21 Score=169.13 Aligned_cols=171 Identities=17% Similarity=0.175 Sum_probs=125.6
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcccc--CCCCEEEEccCCCCCCC----
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEAT--QKFPYVIFCAPPSRSLD---- 157 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~--~~~D~Vi~~a~~~~~~~---- 157 (268)
|||||||+ ||||++|+++|.++ ||+|++++|..-+...... + .+.+ .++|+|||+|+......
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~~D~~d~~~--~------~~~l~~~~~d~vih~a~~~~~~~~~~~ 71 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDLDITNVLA--V------NKFFNEKKPNVVINCAAHTAVDKCEEQ 71 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTCCTTCHHH--H------HHHHHHHCCSEEEECCCCCCHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechhccCCCHHH--H------HHHHHHcCCCEEEeecccccccccccc
Confidence 57999997 99999999999999 9999999986432111000 0 0122 26799999998765321
Q ss_pred hHH-------HHHHHH-HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEe
Q 024417 158 YPG-------DVRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (268)
Q Consensus 158 ~~~-------~~~~~~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp 227 (268)
... ....+. .......++++.||..+|+.....+.+|++++.|. ..|++.|..+|+++.+.+ .+|+||
T Consensus 72 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~--~~~~~~k~~~e~~~~~~~~~~~i~R~ 149 (281)
T d1vl0a_ 72 YDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQ--SAYGKTKLEGENFVKALNPKYYIVRT 149 (281)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSSEEEEEE
T ss_pred chhhcccccccccccccccccccccccccccceeeeccccccccccccccch--hhhhhhhhHHHHHHHHhCCCccccce
Confidence 010 111111 12344678999999999998777789999998887 899999999999999887 799999
Q ss_pred CceecCCCcHHHH---HHHcCC-ccCCCCcccCcccHhhHhhcc
Q 024417 228 AGLYKADRGAHVY---WLQKGT-VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 228 ~~vyG~~~~~~~~---~l~~g~-~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+++||++.+.... .+.++. ....+++.++++|++|+++++
T Consensus 150 ~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~ 193 (281)
T d1vl0a_ 150 AWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVV 193 (281)
T ss_dssp CSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHH
T ss_pred eEEeCCCcccccchhhhhccCCceeecCCceeccchhhhhhhhh
Confidence 9999998765432 233344 344568999999999999876
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.85 E-value=1.1e-21 Score=178.43 Aligned_cols=179 Identities=11% Similarity=0.023 Sum_probs=120.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC---------------CC-c-c------hhhhcCCceeeccCc---
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---------------AD-H-H------DELINMGITPSLKWT--- 137 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~---------------~~-~-~------~~l~~~~i~~~~~D~--- 137 (268)
|||||||+ ||||++|+++|+++ ||+|+++|.- +. . . ..+...+++++.+|.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~ 79 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 79 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence 68999997 99999999999999 9999999720 00 0 0 011224677777775
Q ss_pred c----ccC--CCCEEEEccCCCCCC----C----------hHHHHHHHH--HHhcC-CCeEEEEccCeeecCCCCC----
Q 024417 138 E----ATQ--KFPYVIFCAPPSRSL----D----------YPGDVRLAA--LSWNG-EGSFLFTSSSAIYDCSDNG---- 190 (268)
Q Consensus 138 ~----~~~--~~D~Vi~~a~~~~~~----~----------~~~~~~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~---- 190 (268)
+ ++. ++|+|||+|+..... + .+.++.+++ +++.+ .+++++.||..+|+.....
T Consensus 80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~ 159 (393)
T d1i24a_ 80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG 159 (393)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence 1 233 679999999864321 1 133444554 23334 4578888888888753211
Q ss_pred --CC-------CCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCcH------------------
Q 024417 191 --AC-------DEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRGA------------------ 237 (268)
Q Consensus 191 --~~-------~E~~~~~p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~~------------------ 237 (268)
.+ +|..+..|. ++|+.+|+.+|+++..+ + .+++||+.+||++..+
T Consensus 160 ~~~~~~~~~~~~~~~~~~p~--~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 160 YITITHNGRTDTLPYPKQAS--SFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp EEEEEETTEEEEEECCCCCC--SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred cccccccccccccccccccc--cHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccc
Confidence 11 122244554 79999999999998755 3 7999999999986421
Q ss_pred -----HHHHHHcCCc---cCCCCcccCcccHhhHhhcc
Q 024417 238 -----HVYWLQKGTV---DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 238 -----~~~~l~~g~~---~~~g~~~~~~Ihv~DlA~ai 267 (268)
+...+..|++ ++++.+.++|+|++|+|+++
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~ 275 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCV 275 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHH
T ss_pred cchhhhhHHhhcCCeeEEeeecccccccccccchHHHH
Confidence 1122344543 47889999999999999876
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=2.5e-20 Score=166.51 Aligned_cols=179 Identities=15% Similarity=0.100 Sum_probs=122.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC------c-c------hhhhcCCceeeccCc---c----c--cC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------H-H------DELINMGITPSLKWT---E----A--TQ 141 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~------~-~------~~l~~~~i~~~~~D~---~----~--~~ 141 (268)
+||||||+ ||||++|+++|+++ |++|+++++... . . ..+....++.+.+|. + . -.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 68999996 99999999999999 999999975211 1 1 112234566777774 1 2 24
Q ss_pred CCCEEEEccCCCCCCC-----------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC-CCCCCCCHHH
Q 024417 142 KFPYVIFCAPPSRSLD-----------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP-VVPIGRSPRT 207 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-----------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~-~~p~~~~~y~ 207 (268)
+.++|+|+|+...... .+.++.+++ ++..++++|||+||+.+|+........++.+ ..+. ++|+
T Consensus 81 ~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~--~~Y~ 158 (346)
T d1ek6a_ 81 SFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCT--NPYG 158 (346)
T ss_dssp CEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS--SHHH
T ss_pred ccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccC--ChHH
Confidence 6668999998754211 123334444 3567999999999999998765433333332 3344 7999
Q ss_pred HHHHHHHHHHHHc-----C--ceEEEeCceecCCCc------------HHHH---H--HHcCCc---------cCCCCcc
Q 024417 208 DVLLKAEKVILEF-----G--GCVLRLAGLYKADRG------------AHVY---W--LQKGTV---------DSRPDHI 254 (268)
Q Consensus 208 ~sK~~aE~~l~~~-----~--~tIlRp~~vyG~~~~------------~~~~---~--l~~g~~---------~~~g~~~ 254 (268)
.+|..+|+.+.++ + .+++||+.+||+... .+.. . +.++.. ...+.+.
T Consensus 159 ~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~ 238 (346)
T d1ek6a_ 159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCee
Confidence 9999999988763 2 699999999998532 0111 1 122222 2457788
Q ss_pred cCcccHhhHhhcc
Q 024417 255 LNLIHYELPSRLQ 267 (268)
Q Consensus 255 ~~~Ihv~DlA~ai 267 (268)
++|+|++|+|.++
T Consensus 239 Rdfi~v~D~a~~~ 251 (346)
T d1ek6a_ 239 RDYIHVVDLAKGH 251 (346)
T ss_dssp ECEEEHHHHHHHH
T ss_pred EeEEEEEeccchh
Confidence 9999999999764
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.83 E-value=2.1e-21 Score=162.43 Aligned_cols=162 Identities=12% Similarity=0.023 Sum_probs=107.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCceeeccCc-----cccCCCCEEEEccCCCCC-
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRS- 155 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~~~~~D~-----~~~~~~D~Vi~~a~~~~~- 155 (268)
|||||+|+ ||||++|+++|+++ |+ +|+++.|++.... ..++....|. .....+|+||||++....
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~--~~~~~v~~~~r~~~~~~----~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~ 76 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALAEH----PRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKE 76 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCCCC----TTEECCBSCHHHHGGGCCSCCSEEEECCCCCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCeEEEEEEeCCchhhc----ccccccccchhhhhhccccchheeeeeeeeeccc
Confidence 79999997 99999999999999 87 6777777643211 1222223332 245678999999976421
Q ss_pred -CC---h----HHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---c
Q 024417 156 -LD---Y----PGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---G 222 (268)
Q Consensus 156 -~~---~----~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~---~ 222 (268)
.. + .....+++ +++.+++++||+|+.++|+.. . +.|+++|.++|+++++.+ +
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~-------------~--~~y~~~K~~~E~~l~~~~~~~~ 141 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS-------------S--IFYNRVKGELEQALQEQGWPQL 141 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC-------------S--SHHHHHHHHHHHHHTTSCCSEE
T ss_pred cccccccccchhhhhhhccccccccccccccccccccccccc-------------c--cchhHHHHHHhhhccccccccc
Confidence 11 1 12223333 357899999999998876531 2 689999999999998876 7
Q ss_pred eEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 223 CVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 223 tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+|+||+.+||+.....................+++||++|+|+++
T Consensus 142 ~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai 186 (212)
T d2a35a1 142 TIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARAL 186 (212)
T ss_dssp EEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHH
T ss_pred eeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHH
Confidence 999999999997543111111111111122345679999999986
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.82 E-value=8.8e-20 Score=162.83 Aligned_cols=180 Identities=14% Similarity=0.092 Sum_probs=127.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----cCCceeeccCc---c----c--cCCCCEEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMGITPSLKWT---E----A--TQKFPYVIF 148 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----~~~i~~~~~D~---~----~--~~~~D~Vi~ 148 (268)
.|||||||+ ||||++|+++|+++ |++|++++|.......+. ..+++.+.+|. + . ...+|+|+|
T Consensus 8 ~KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~ 85 (356)
T d1rkxa_ 8 GKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 85 (356)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhh
Confidence 479999996 99999999999999 999999999866543321 23688888875 1 2 347899999
Q ss_pred ccCCCCCCC-----------hHHHHHHHHH--H-hcCCCeEEEEccCeeecCCC-CCCCCCCCCCCCCCCCHHHHHHHHH
Q 024417 149 CAPPSRSLD-----------YPGDVRLAAL--S-WNGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKA 213 (268)
Q Consensus 149 ~a~~~~~~~-----------~~~~~~~~~~--~-~~gvkr~V~~SS~~vYg~~~-~~~~~E~~~~~p~~~~~y~~sK~~a 213 (268)
+|+...... .+.++.+++. . ....+.+++.|+..+|+... ..+.+|+.+..|. ++|+..|...
T Consensus 86 ~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~--~~y~~~k~~~ 163 (356)
T d1rkxa_ 86 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY--DPYSNSKGCA 163 (356)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--SHHHHHHHHH
T ss_pred hhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCC--Cccccccccc
Confidence 998754311 1223444441 2 34556666666666555433 3477888887787 8999999999
Q ss_pred HHHHHHc-------------C--ceEEEeCceecCCCc---HH----HHHHHcCCc--cCCCCcccCcccHhhHhhcc
Q 024417 214 EKVILEF-------------G--GCVLRLAGLYKADRG---AH----VYWLQKGTV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 214 E~~l~~~-------------~--~tIlRp~~vyG~~~~---~~----~~~l~~g~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
|..+..+ + ++++||+.+|||++. .+ ...+..+.+ ++.+++.++++|++|+|+++
T Consensus 164 e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~ 241 (356)
T d1rkxa_ 164 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGY 241 (356)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHH
T ss_pred hhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchh
Confidence 9777642 1 589999999999752 11 223344443 57889999999999999875
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=8.1e-19 Score=152.20 Aligned_cols=176 Identities=13% Similarity=0.124 Sum_probs=111.9
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCc--chhhhcCCceeec--cCc-------cccCCCCEEEEccCCC
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH--HDELINMGITPSL--KWT-------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~--~~~l~~~~i~~~~--~D~-------~~~~~~D~Vi~~a~~~ 153 (268)
|||||+ ||||++|+++|+++ |+ +|+++++-... ...+....+.... .|. .....+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~--g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~ 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred EEEecCccHHHHHHHHHHHhC--CCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence 899996 99999999999999 95 79998753322 2222222221111 111 2457899999999754
Q ss_pred CCCC---------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024417 154 RSLD---------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (268)
Q Consensus 154 ~~~~---------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~- 221 (268)
.... ......+++ ....++ ++|+.||..+|+........|+.+..|. +.|+.+|+.+|.+++++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i-~~v~~ss~~~~~~~~~~~~~~~~~~~~~--~~Y~~~K~~~e~~~~~~~~ 156 (307)
T d1eq2a_ 80 STTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVYGYSKFLFDEYVRQILP 156 (307)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS--SHHHHHHHHHHHHHHHHGG
T ss_pred cccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc--cccccccchhhhhcccccc
Confidence 4321 122233333 234455 4777777777765545555666665565 899999999999998763
Q ss_pred -----ceEEEeCceecCCCcH----------HHHHHHcCCc----cCCCCcccCcccHhhHhhcc
Q 024417 222 -----GCVLRLAGLYKADRGA----------HVYWLQKGTV----DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 222 -----~tIlRp~~vyG~~~~~----------~~~~l~~g~~----~~~g~~~~~~Ihv~DlA~ai 267 (268)
++++||+.+|||+... +...+..|+. .+.+...++|+|++|+++++
T Consensus 157 ~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~ 221 (307)
T d1eq2a_ 157 EANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVN 221 (307)
T ss_dssp GCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHH
T ss_pred ccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHH
Confidence 7999999999996531 1223455542 35677889999999999875
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.78 E-value=2.8e-19 Score=155.50 Aligned_cols=174 Identities=11% Similarity=-0.034 Sum_probs=122.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--------hhhcCCceeeccCc-------cccCCCCEEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--------ELINMGITPSLKWT-------EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--------~l~~~~i~~~~~D~-------~~~~~~D~Vi 147 (268)
++||||||+ ||||++|+++|+++ ||+|++++|++.... .+...+++.+.+|. +.+.++++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence 568999996 99999999999999 999999999754321 23345788887765 2678999999
Q ss_pred EccCCCCCCChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ce
Q 024417 148 FCAPPSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (268)
Q Consensus 148 ~~a~~~~~~~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~t 223 (268)
++++............+.+ ++..+..++++.||.++++.. +..+..|. ..|...+..+|++..+.+ ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 152 (312)
T d1qyda_ 81 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQPG--SITFIDKRKVRRAIEAASIPYT 152 (312)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSST--THHHHHHHHHHHHHHHTTCCBC
T ss_pred hhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccchh--hhhhHHHHHHHHhhcccccceE
Confidence 9998754332222222222 255677888888886655432 23333344 578888889999988877 89
Q ss_pred EEEeCceecCCCcHHHH----HHHcC-Cc--cCCCCcccCcccHhhHhhcc
Q 024417 224 VLRLAGLYKADRGAHVY----WLQKG-TV--DSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 224 IlRp~~vyG~~~~~~~~----~l~~g-~~--~~~g~~~~~~Ihv~DlA~ai 267 (268)
++||+.+||+....... ....+ .. ++.+++.++|||++|+|+++
T Consensus 153 i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 203 (312)
T d1qyda_ 153 YVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYT 203 (312)
T ss_dssp EEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHH
T ss_pred EeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHH
Confidence 99999999974322110 11112 22 57789999999999999975
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.78 E-value=1.1e-18 Score=153.83 Aligned_cols=178 Identities=16% Similarity=0.108 Sum_probs=118.2
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC--cchh---hh-cCCceeeccCcc-------ccC--CCCEEEEc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDE---LI-NMGITPSLKWTE-------ATQ--KFPYVIFC 149 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~--~~~~---l~-~~~i~~~~~D~~-------~~~--~~D~Vi~~ 149 (268)
||||||+ ||||++|+++|+++ |++|+++++-.. ..+. +. ..+++.+.+|.. +++ ++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 8999997 99999999999999 999999985322 2221 21 246777777751 233 56999999
Q ss_pred cCCCCCC----C-------hHHHHHHHH--HHhcCCCeEEEEccCe-eecCCCC----------------CCCCCCCCCC
Q 024417 150 APPSRSL----D-------YPGDVRLAA--LSWNGEGSFLFTSSSA-IYDCSDN----------------GACDEDSPVV 199 (268)
Q Consensus 150 a~~~~~~----~-------~~~~~~~~~--~~~~gvkr~V~~SS~~-vYg~~~~----------------~~~~E~~~~~ 199 (268)
|+..... + .+.++.+++ +.+.+++++|+.||.. +|+.... ....+.++..
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 159 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence 9976431 1 244556665 2455777666666654 4443221 1233444555
Q ss_pred CCCCCHHHHHHHHHHHHHHHc----C--ceEEEeCceecCCCc---------HHHHH---HH--cCCc---cCCCCcccC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYKADRG---------AHVYW---LQ--KGTV---DSRPDHILN 256 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~----~--~tIlRp~~vyG~~~~---------~~~~~---l~--~g~~---~~~g~~~~~ 256 (268)
|. +.|+..|...|.++... + .+++|+..+||+... .+... .. .++. ++.|.+.++
T Consensus 160 ~~--~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~ 237 (338)
T d1orra_ 160 FH--SPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237 (338)
T ss_dssp CC--HHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred cc--cccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEe
Confidence 55 78999999999887654 2 689999999976431 11111 12 2332 578889999
Q ss_pred cccHhhHhhcc
Q 024417 257 LIHYELPSRLQ 267 (268)
Q Consensus 257 ~Ihv~DlA~ai 267 (268)
|+|++|+++++
T Consensus 238 ~~~v~D~~~~~ 248 (338)
T d1orra_ 238 VLHAEDMISLY 248 (338)
T ss_dssp CEEHHHHHHHH
T ss_pred eecccchhhHH
Confidence 99999999875
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.76 E-value=1.8e-18 Score=149.55 Aligned_cols=170 Identities=12% Similarity=0.104 Sum_probs=115.1
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCcc----cc--CCCCEEEEccCCCCC--
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----AT--QKFPYVIFCAPPSRS-- 155 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~----~~--~~~D~Vi~~a~~~~~-- 155 (268)
|||||||+ ||||++|+++|.++ |+.| ++++...... ....|.+ .+ .++|+|||||+....
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g~~v-~~~~~~~~~~--------~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~ 69 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--GNLI-ALDVHSKEFC--------GDFSNPKGVAETVRKLRPDVIVNAAAHTAVDK 69 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--SEEE-EECTTCSSSC--------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEE-EEECCCcccc--------CcCCCHHHHHHHHHHcCCCEEEEecccccccc
Confidence 57999997 99999999999998 7654 5555432210 0111221 22 267999999986532
Q ss_pred --CC-------hHHHHHHHH-HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ce
Q 024417 156 --LD-------YPGDVRLAA-LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (268)
Q Consensus 156 --~~-------~~~~~~~~~-~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~t 223 (268)
.. ....+.+++ ..+....++++.||..+|+...+.+++|++++.|. +.|+++|..+|+.+++.. ..
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~--~~y~~~k~~~e~~~~~~~~~~~ 147 (298)
T d1n2sa_ 70 AESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPKHL 147 (298)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSSEE
T ss_pred cccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCC--chHhhhhhhhhhhHHhhhcccc
Confidence 11 112233333 23334578999999999987777789999998887 899999999999998765 56
Q ss_pred EEEeCcee-cCCCcHHH---HHHHcCC-ccCCCCcccCcccHhhHhhcc
Q 024417 224 VLRLAGLY-KADRGAHV---YWLQKGT-VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 224 IlRp~~vy-G~~~~~~~---~~l~~g~-~~~~g~~~~~~Ihv~DlA~ai 267 (268)
++|++..| |.+.+... ..+..+. +...++...+++|+.|+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 196 (298)
T d1n2sa_ 148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCT 196 (298)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred cccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHH
Confidence 66666665 44544322 2233333 344567889999999998865
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.75 E-value=6.9e-19 Score=151.73 Aligned_cols=171 Identities=14% Similarity=0.042 Sum_probs=118.5
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch---------hhhcCCceeeccCc-------cccCCCCEE
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---------ELINMGITPSLKWT-------EATQKFPYV 146 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~---------~l~~~~i~~~~~D~-------~~~~~~D~V 146 (268)
++||||||+ ||||++|+++|+++ ||+|++++|++.... .+...+++.+.+|. +.+.+++.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceee
Confidence 679999997 99999999999999 999999999765432 12334677777764 256799999
Q ss_pred EEccCCCCCCChHHHHHHHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceE
Q 024417 147 IFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (268)
Q Consensus 147 i~~a~~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tI 224 (268)
+|+++..........+. . ....+++++++.|+...+.. +.....+. ..+...+...|.++.+.+ ++|
T Consensus 81 i~~~~~~~~~~~~~~~~-a-~~~~~~~~~~~~s~~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i 149 (307)
T d1qyca_ 81 ISTVGSLQIESQVNIIK-A-IKEVGTVKRFFPSEFGNDVD-------NVHAVEPA--KSVFEVKAKVRRAIEAEGIPYTY 149 (307)
T ss_dssp EECCCGGGSGGGHHHHH-H-HHHHCCCSEEECSCCSSCTT-------SCCCCTTH--HHHHHHHHHHHHHHHHHTCCBEE
T ss_pred eecccccccchhhHHHH-H-HHHhccccceeeeccccccc-------cccccccc--cccccccccccchhhccCCCcee
Confidence 99987654332222222 1 24567889999988554332 11121122 356667788888888876 899
Q ss_pred EEeCceecCCCcHHHHH---HHcCC---ccCCCCcccCcccHhhHhhcc
Q 024417 225 LRLAGLYKADRGAHVYW---LQKGT---VDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 225 lRp~~vyG~~~~~~~~~---l~~g~---~~~~g~~~~~~Ihv~DlA~ai 267 (268)
+||+.+||+....+... ..++. .++.+++.++|||++|+|+++
T Consensus 150 ~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 198 (307)
T d1qyca_ 150 VSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFT 198 (307)
T ss_dssp EECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHH
T ss_pred cccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHH
Confidence 99999999754332211 11222 156789999999999999986
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.73 E-value=1.7e-18 Score=144.35 Aligned_cols=172 Identities=15% Similarity=0.112 Sum_probs=113.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCe--EEEEeCCCCcchhhhcCCceeeccCc-------cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ--IYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~--V~~~~R~~~~~~~l~~~~i~~~~~D~-------~~~~~~D~Vi~~a~~ 152 (268)
.|++|||||+ |+||++|+++|+++ |++ |++++|++++...+. .+++.+.+|. ++++++|+|||+++.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~--g~~v~v~~~~R~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEG--SDKFVAKGLVRSAQGKEKIG-GEADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHT--TTTCEEEEEESCHHHHHHTT-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCcEEEEEEcCCHHHHHhcc-CCcEEEEeeeccccccccccccceeeEEEEee
Confidence 4889999996 99999999999999 864 667788776554433 4666676664 367899999999975
Q ss_pred CCCC-----------------C-------hHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHH
Q 024417 153 SRSL-----------------D-------YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (268)
Q Consensus 153 ~~~~-----------------~-------~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y 206 (268)
.... . ...+..+++ ......++..+.|+...+.... +........|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--------~~~~~~~~~~ 150 (252)
T d2q46a1 79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--------PLNKLGNGNI 150 (252)
T ss_dssp CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--------GGGGGGGCCH
T ss_pred ccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc--------ccccccccch
Confidence 3210 0 023344444 2456788999988766554321 1111111456
Q ss_pred HHHHHHHHHHHHHcC--ceEEEeCceecCCCcHHHHHHHcCCccCCCCcccCcccHhhHhhcc
Q 024417 207 TDVLLKAEKVILEFG--GCVLRLAGLYKADRGAHVYWLQKGTVDSRPDHILNLIHYELPSRLQ 267 (268)
Q Consensus 207 ~~sK~~aE~~l~~~~--~tIlRp~~vyG~~~~~~~~~l~~g~~~~~g~~~~~~Ihv~DlA~ai 267 (268)
...+...|.+..+.+ ++++||+++||+...... +..+..........++||++|+|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~Dva~a~ 211 (252)
T d2q46a1 151 LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE--LLVGKDDELLQTDTKTVPRADVAEVC 211 (252)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSC--EEEESTTGGGGSSCCEEEHHHHHHHH
T ss_pred hhhhhhhhhhhhcccccceeecceEEECCCcchhh--hhhccCcccccCCCCeEEHHHHHHHH
Confidence 677777888888777 899999999999753211 00111111234556799999999986
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.54 E-value=1.5e-14 Score=128.66 Aligned_cols=170 Identities=13% Similarity=-0.007 Sum_probs=115.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--hhh-cCCceeeccCc--------cccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELI-NMGITPSLKWT--------EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--~l~-~~~i~~~~~D~--------~~~~~~D~Vi~~a~ 151 (268)
+|+|||||+ |+||++|+++|+++ ||+|++++|++.+.. .+. ..+++.+.+|. .++.++|++++...
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 578999997 99999999999999 999999999876543 222 24788887774 15688999887766
Q ss_pred CCCCCChHHHHHHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ceEEEe
Q 024417 152 PSRSLDYPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~--~tIlRp 227 (268)
..... .....++++ +.+.|++++|+.||........ ..+. .+|...|...|+++.+.. ++++|+
T Consensus 81 ~~~~~-~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~---------~~~~--~~~~~~k~~~~~~~~~~~~~~~~vr~ 148 (350)
T d1xgka_ 81 SQAGD-EIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG---------PWPA--VPMWAPKFTVENYVRQLGLPSTFVYA 148 (350)
T ss_dssp STTSC-HHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS---------SCCC--CTTTHHHHHHHHHHHTSSSCEEEEEE
T ss_pred cccch-hhhhhhHHHHHHHHhCCCceEEEeeccccccCC---------cccc--hhhhhhHHHHHHHHHhhccCceeeee
Confidence 54332 333444444 3567889999998865433211 0111 345567889999998876 899999
Q ss_pred CceecCCCcH---HH--HHHHcCCc----cCCCCcccCcccH-hhHhhcc
Q 024417 228 AGLYKADRGA---HV--YWLQKGTV----DSRPDHILNLIHY-ELPSRLQ 267 (268)
Q Consensus 228 ~~vyG~~~~~---~~--~~l~~g~~----~~~g~~~~~~Ihv-~DlA~ai 267 (268)
+.+++..... .. ..+..+.. ...++..++++++ +|+++++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v 198 (350)
T d1xgka_ 149 GIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPAL 198 (350)
T ss_dssp CEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHH
T ss_pred ceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHH
Confidence 9988753211 00 01122221 3457788888886 7898764
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.91 E-value=1e-08 Score=86.95 Aligned_cols=136 Identities=12% Similarity=0.056 Sum_probs=92.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------------cccCCCCEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------------EATQKFPYV 146 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------------~~~~~~D~V 146 (268)
+..|++||||+ +-||+.++++|.++ |++|.+.+|+++..+..+..+...+.+|. +.....|++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 80 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVL 80 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeE
Confidence 34678999997 99999999999999 99999999987765544444556666664 135689999
Q ss_pred EEccCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~~~--------~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+...... |.+.+. .++ +++.+-.++|++||...+-.. | +...
T Consensus 81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~------------~-~~~~ 147 (248)
T d2d1ya1 81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------------Q-ENAA 147 (248)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------------T-TBHH
T ss_pred EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc------------c-ccch
Confidence 99998643211 221111 111 134556799999997653211 1 1157
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
|+.+|...+.+.+.. + +..+.||.+-.
T Consensus 148 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T 183 (248)
T d2d1ya1 148 YNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIAT 183 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCC
Confidence 999999888766543 2 57788988753
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.90 E-value=1e-08 Score=86.59 Aligned_cols=135 Identities=17% Similarity=0.181 Sum_probs=91.3
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCc---c-----------ccCCCCEE
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT---E-----------ATQKFPYV 146 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~---~-----------~~~~~D~V 146 (268)
..|++||||+ +-||+.++++|.++ |++|++.+|++++.+++. ..+.+.+.+|. + .....|++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 81 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence 3578999997 89999999999999 999999999877665543 34666666764 1 34689999
Q ss_pred EEccCCCCCCC--------hHHHHH-H----------HH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRSLD--------YPGDVR-L----------AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~~~--------~~~~~~-~----------~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+...... |.+.+. | .+ ..+.+...++.+||.+..+. | +...
T Consensus 82 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~-------------~-~~~~ 147 (242)
T d1ulsa_ 82 VHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGN-------------L-GQAN 147 (242)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCC-------------T-TCHH
T ss_pred EECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCC-------------C-CCcc
Confidence 99998654321 222111 1 11 13445567777777543221 1 1158
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 148 Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~ 184 (242)
T d1ulsa_ 148 YAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETR 184 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred hHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccCh
Confidence 999999888766543 2 578899998754
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.88 E-value=1e-08 Score=86.60 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=93.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc----------cccCCCCEEEEc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT----------EATQKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~----------~~~~~~D~Vi~~ 149 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|++++.+++.. .++..+..|. +.+...|++||+
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 3578999997 99999999999999 9999999998777655432 3456666664 246799999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 150 APPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
|+...... |.+.+ +.++ .++.+..++|++||...+... |. ...|+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------------~~-~~~Y~ 150 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------TN-HSVYC 150 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TT-BHHHH
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc------------cc-hhhhh
Confidence 98654321 21111 1111 133456789999997643211 11 15799
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+|...+.+.+.. + ...+.||.+.-+
T Consensus 151 asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 151 STKGALDMLTKVMALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence 9998888776644 2 578889988643
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.86 E-value=2.8e-08 Score=84.03 Aligned_cols=137 Identities=13% Similarity=0.108 Sum_probs=88.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcch--hhhcCC--ceeeccCc--------------cccCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINMG--ITPSLKWT--------------EATQK 142 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~--~l~~~~--i~~~~~D~--------------~~~~~ 142 (268)
+..|.+||||+ +-||+.++++|.++ |++|.+.+|++++.. .++..+ +..+.+|. +....
T Consensus 3 L~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~ 80 (247)
T d2ew8a1 3 LKDKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGR 80 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 44578999997 99999999999999 999999999765421 223333 44455664 13568
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|++||+|+...... |.+.+ +.++ .++.+-.++|++||....... |.
T Consensus 81 iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~~ 148 (247)
T d2ew8a1 81 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI------------EA 148 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC------------SS
T ss_pred CCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC------------cc
Confidence 999999999754321 21111 1111 234556799999997643211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|+.+|...+.+.+.+ + +..+.||.+.-+
T Consensus 149 -~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 188 (247)
T d2ew8a1 149 -YTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTA 188 (247)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---
T ss_pred -cccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 157999998887666543 2 577889988654
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.86 E-value=1.3e-08 Score=85.85 Aligned_cols=135 Identities=13% Similarity=0.053 Sum_probs=92.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc----------cccCCCCEEEEc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT----------EATQKFPYVIFC 149 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~----------~~~~~~D~Vi~~ 149 (268)
..|++||||+ +-||+.++++|.++ |++|++.+|++++.+++.+ .++..+.+|. +.+...|++||+
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnn 81 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEEC
Confidence 3578999997 99999999999999 9999999998776655432 3566666664 245789999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 150 APPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
|+...... |.+.+ +.++ .++.+..++|++||...+... |. ...|+
T Consensus 82 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~-~~~Y~ 148 (242)
T d1cyda_ 82 AALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------PN-LITYS 148 (242)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TT-BHHHH
T ss_pred CccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC------------Cc-ccccc
Confidence 98654321 21111 1111 123345689999997643211 11 15799
Q ss_pred HHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 208 DVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 208 ~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
.+|...+.+.+.. + ...+-||.+..
T Consensus 149 asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T 182 (242)
T d1cyda_ 149 STKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLT 182 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTT
T ss_pred chHHHHHHHHHHHHHHhCccCeecccCCCCCccC
Confidence 9999888776654 2 57788988853
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.86 E-value=4.3e-08 Score=82.11 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=90.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------~~~~~~D~Vi~~a~~~ 153 (268)
+.|++||||+ +-||+.++++|.++ |++|.+.+|+++.. ++.+.+.+.+|. +.+...|++||+|+..
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~~l---~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~ 77 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELL---KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP 77 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHH---HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHH---HhcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence 3578999997 99999999999999 99999999986544 344555666664 2567999999999854
Q ss_pred CCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q 024417 154 RSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (268)
Q Consensus 154 ~~~~--------~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~sK~~ 212 (268)
.... |.+.+. .++ .++.+..++|.++|...+... ... ..|+.+|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~-----------~~~--~~Y~asKaa 144 (234)
T d1o5ia_ 78 KAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI-----------ENL--YTSNSARMA 144 (234)
T ss_dssp CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-----------TTB--HHHHHHHHH
T ss_pred CCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc-----------ccc--ccchhHHHH
Confidence 3321 221111 111 134456789999987543211 011 578889988
Q ss_pred HHHHHHHc-------C--ceEEEeCceecC
Q 024417 213 AEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 213 aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+.+.+.. + +..+.||.+-.+
T Consensus 145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~ 174 (234)
T d1o5ia_ 145 LTGFLKTLSFEVAPYGITVNCVAPGWTETE 174 (234)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCT
T ss_pred HHHHHHHHHHHhcccCeEEeecccCccchh
Confidence 88666543 2 467889988655
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.86 E-value=1.6e-08 Score=85.50 Aligned_cols=138 Identities=11% Similarity=0.074 Sum_probs=94.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc----------cccCCCCEEEEc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT----------EATQKFPYVIFC 149 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~----------~~~~~~D~Vi~~ 149 (268)
+..|++||||+ +-||+.++++|+++ |++|++.+|++++.+++.+ .+++....|. +.....|++||+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ 81 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNV 81 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEec
Confidence 34578999997 99999999999999 9999999999877666544 3566666654 146799999999
Q ss_pred cCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 150 APPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 150 a~~~~~~~--------~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
++.....+ |.+.+. .++ ..+.+..++|++||..- .. .+.... ..|+.
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~--------~~~~~~--~~Y~~ 149 (245)
T d2ag5a1 82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SV--------KGVVNR--CVYST 149 (245)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TT--------BCCTTB--HHHHH
T ss_pred ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhh--cc--------CCccch--hHHHH
Confidence 98654322 211111 111 13445678999998542 00 011111 57999
Q ss_pred HHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 209 VLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 209 sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
+|...|.+.+... +..+.||.+-.+
T Consensus 150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~ 183 (245)
T d2ag5a1 150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTP 183 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeech
Confidence 9999988776542 578899988654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.85 E-value=2.6e-08 Score=84.55 Aligned_cols=133 Identities=11% Similarity=0.011 Sum_probs=87.1
Q ss_pred Ce-EEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc--------------cccCC
Q 024417 85 ND-LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT--------------EATQK 142 (268)
Q Consensus 85 ~k-VLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~--------------~~~~~ 142 (268)
|| +||||+ +-||+.++++|.++ |++|.+.+|++++.+++ ...+ +..+.+|. +....
T Consensus 1 KKValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 78 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 35 589997 99999999999999 99999999987665443 3333 34455664 13568
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
.|++||+|+...... |.+.+ +..+ .+.....++|++||...+... |
T Consensus 79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------~ 146 (255)
T d1gega_ 79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------P 146 (255)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------T
T ss_pred ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC------------c
Confidence 999999998644321 21111 1111 122334679999987643211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
. ...|+.+|...+.+.+.. + ...+.||.+--
T Consensus 147 ~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T 186 (255)
T d1gega_ 147 E-LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKT 186 (255)
T ss_dssp T-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSS
T ss_pred c-cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccC
Confidence 1 157999999888776543 2 57888998743
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.83 E-value=3.3e-08 Score=83.14 Aligned_cols=131 Identities=11% Similarity=0.025 Sum_probs=87.3
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------------cccCCCCEE
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------------EATQKFPYV 146 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------------~~~~~~D~V 146 (268)
+..|++||||+ +-||+.++++|.++ |++|++.+|+.+..+.+ ..+.+|. +.....|++
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL 77 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVL 77 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcchhcCc-----eEEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence 44678999997 99999999999999 99999999987765432 2333432 135689999
Q ss_pred EEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCH
Q 024417 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (268)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~ 205 (268)
||+|+...... |.+.+ +.++ ..+.+..++|++||...+... + +...
T Consensus 78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~-~~~~ 144 (237)
T d1uzma1 78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI------------G-NQAN 144 (237)
T ss_dssp EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------CCHH
T ss_pred EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC------------c-ccHH
Confidence 99998643211 21111 1111 244566799999997643211 1 1158
Q ss_pred HHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 206 y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
|+.+|...+.+.+.. + +..+.||.+.-
T Consensus 145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T 180 (237)
T d1uzma1 145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDT 180 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCC
Confidence 999999888776543 2 47789998864
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.83 E-value=1.2e-08 Score=86.30 Aligned_cols=135 Identities=11% Similarity=0.064 Sum_probs=91.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc--------------cccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~--------------~~~~~~D 144 (268)
..|.+||||+ +-||+.++++|+++ |++|++.+|++++.+++.+ .....+.+|. +.....|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcc
Confidence 3578999997 99999999999999 9999999998776655432 2344455553 1356899
Q ss_pred EEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
++||+|+...... |.+.+ +.++ ..+++-.++|++||..-+-.. | +.
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~------------~-~~ 147 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN------------G-GQ 147 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------T-TC
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC------------C-CC
Confidence 9999998654322 21111 1111 134456789999997654321 1 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
..|+.+|.+.+.+.+.. + +..+.||.+--
T Consensus 148 ~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T 185 (243)
T d1q7ba_ 148 ANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIET 185 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEec
Confidence 58999999888776653 2 57889998753
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.82 E-value=2e-08 Score=84.99 Aligned_cols=138 Identities=11% Similarity=-0.014 Sum_probs=92.5
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc--------------cccCC
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQK 142 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~--------------~~~~~ 142 (268)
++..|.+||||+ +-||+.++++|+++ |++|++.+|++++.+.+.+ .....+.+|. +....
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGG 80 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 345688999997 99999999999999 9999999998776654432 2344455554 13568
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|++||+|+...... |.+.+ +.++ ..+.+-.++|++||...+... |
T Consensus 81 idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~- 147 (244)
T d1nffa_ 81 LHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT------------V- 147 (244)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------T-
T ss_pred CeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc------------c-
Confidence 999999998654321 22111 1111 134455789999997643211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+...|+.+|...+.+.+.. + +..+-||.+..+
T Consensus 148 ~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 188 (244)
T d1nffa_ 148 ACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 188 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSG
T ss_pred cccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccCh
Confidence 1157999999888776644 2 577889888643
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.77 E-value=3.8e-08 Score=83.68 Aligned_cols=134 Identities=14% Similarity=-0.003 Sum_probs=90.5
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-C--CceeeccCc--------------cccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--GITPSLKWT--------------EATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~--~i~~~~~D~--------------~~~~~~D 144 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|+.++.+++.+ . .+..+.+|. +.....|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence 3578999997 89999999999999 9999999998776554322 2 244555664 1346899
Q ss_pred EEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
++||+|+...... |.+.+ +.++ .++.+-.++|++||..-+... | +.
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~------------~-~~ 148 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL------------A-LT 148 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------T-TC
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc------------c-ch
Confidence 9999998654321 21111 1111 134456799999997643211 1 12
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
..|+.+|...+.+.+.. + +..+-||.+.
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~ 185 (254)
T d1hdca_ 149 SSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTY 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCccc
Confidence 58999999888766543 2 5788898885
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.77 E-value=4.7e-08 Score=82.82 Aligned_cols=137 Identities=17% Similarity=0.115 Sum_probs=90.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----h-cCC--ceeeccCc--------------ccc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I-NMG--ITPSLKWT--------------EAT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~-~~~--i~~~~~D~--------------~~~ 140 (268)
..|++||||+ +-||+.++++|+++ |++|.+.+|+.++.++. . ..+ +..+.+|. +..
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999997 99999999999999 99999999987654432 1 123 34455664 135
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|++||+|+...... |.+.+ +.++ +++.+-.++|+++|....... .
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~-----------~ 150 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-----------M 150 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-----------S
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc-----------C
Confidence 68999999998654322 22111 1111 134556799999985431100 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+ +...|+.+|...+.+.+.. + ...+.||.+-.+
T Consensus 151 ~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~ 192 (251)
T d1vl8a_ 151 P-NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTK 192 (251)
T ss_dssp S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCST
T ss_pred c-cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCH
Confidence 1 1157999998888766543 2 578899998755
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.76 E-value=1.6e-07 Score=80.80 Aligned_cols=143 Identities=11% Similarity=-0.004 Sum_probs=91.1
Q ss_pred CCCCCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc---CCceeeccCc---c------
Q 024417 76 GASSGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN---MGITPSLKWT---E------ 138 (268)
Q Consensus 76 ~~~~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~---~~i~~~~~D~---~------ 138 (268)
..++..+..|++||||+ |-||+.++++|+++ |++|++.+|+.++.++ +.. ..+..+.+|. +
T Consensus 17 ~~~~~~l~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~ 94 (294)
T d1w6ua_ 17 MLPPNSFQGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTV 94 (294)
T ss_dssp CSCTTTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHh
Confidence 34455666789999996 99999999999999 9999999998765433 211 2234445554 1
Q ss_pred -----ccCCCCEEEEccCCCCCCC--------hHHHHH-H----------HH---HHhcCCCeEEEEccCeeecCCCCCC
Q 024417 139 -----ATQKFPYVIFCAPPSRSLD--------YPGDVR-L----------AA---LSWNGEGSFLFTSSSAIYDCSDNGA 191 (268)
Q Consensus 139 -----~~~~~D~Vi~~a~~~~~~~--------~~~~~~-~----------~~---~~~~gvkr~V~~SS~~vYg~~~~~~ 191 (268)
....+|++||+|+...... +.+... + .. ........++.+++.......
T Consensus 95 ~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~---- 170 (294)
T d1w6ua_ 95 SELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS---- 170 (294)
T ss_dssp HHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC----
T ss_pred hhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc----
Confidence 3568999999999754322 111110 0 00 122344566777665432211
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 192 ~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+... +..+.||.+-.+
T Consensus 171 --------~~-~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 212 (294)
T d1w6ua_ 171 --------GF-VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTK 212 (294)
T ss_dssp --------TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred --------cc-cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccc
Confidence 11 1579999998888776542 578899998644
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3.9e-08 Score=83.39 Aligned_cols=134 Identities=12% Similarity=0.066 Sum_probs=90.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc--CCceeeccCc--------------cccCCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT--------------EATQKFP 144 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~--~~i~~~~~D~--------------~~~~~~D 144 (268)
+..|++||||+ +-||+.++++|+++ |++|++.+|++++.+.+.+ .+...+.+|. +.....|
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLD 81 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 44678999997 99999999999999 9999999998777665543 2455556664 1356899
Q ss_pred EEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 145 ~Vi~~a~~~~~-~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
++||+|+.... . + |.+.+ +.++ +++. -.++|++||...+-.. |.
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~------------~~- 147 (250)
T d1ydea1 82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ------------AQ- 147 (250)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC------------TT-
T ss_pred EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccc------------cC-
Confidence 99999985421 1 1 21111 1111 1233 3699999997654321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 148 ~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~ 185 (250)
T d1ydea1 148 AVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIW 185 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred cchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 158999998888766543 2 5788999884
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.75 E-value=3.4e-08 Score=84.13 Aligned_cols=138 Identities=12% Similarity=0.040 Sum_probs=92.2
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc--------------cc
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EA 139 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~--------------~~ 139 (268)
++..|.+||||+ +-||+.++++|.++ |++|++.+|++++.+. +...+ +..+.+|. +.
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRD 79 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 455688999997 99999999999999 9999999998766543 23333 34455664 13
Q ss_pred cCCCCEEEEccCCCCC-CC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
....|++||+|+.... .. |.+.+ +.++ ..+.+-.++|++||..-+...
T Consensus 80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~---------- 149 (260)
T d1zema1 80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP---------- 149 (260)
T ss_dssp HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC----------
T ss_pred hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC----------
Confidence 5689999999986432 11 21111 1111 133456799999997643211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + ...+.||.+--+
T Consensus 150 --~~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 150 --PN-MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp --TT-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred --cc-hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 11 157999998888766543 2 578889988643
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.74 E-value=5.3e-08 Score=82.69 Aligned_cols=136 Identities=12% Similarity=0.029 Sum_probs=90.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc--------------cccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~--------------~~~~~~D 144 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|+.++.+.+.. ..+..+.+|. +.....|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iD 81 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVRE--GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSID 81 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 3468999997 99999999999999 9999999998776554332 2344455664 1356899
Q ss_pred EEEEccCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
++||+|+...... |.+.+ +.++ .++....++|++||...+-.. |.
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~- 148 (256)
T d1k2wa_ 82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE------------AL- 148 (256)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TT-
T ss_pred EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc------------cc-
Confidence 9999999654321 21111 1111 123335689999997643211 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 149 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 149 VGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCT
T ss_pred ccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCch
Confidence 158999999888776543 2 578889987655
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.69 E-value=4.2e-08 Score=82.92 Aligned_cols=136 Identities=14% Similarity=0.073 Sum_probs=89.2
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC--CceeeccCc--------------ccc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--GITPSLKWT--------------EAT 140 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~--~i~~~~~D~--------------~~~ 140 (268)
+..+.+||||+ +-||+.++++|.++ |++|+..+|+.++.+++. .. .+..+.+|. +..
T Consensus 5 l~Gkv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 82 (244)
T d1yb1a_ 5 VTGEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 82 (244)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 34578999997 99999999999999 999999999987665432 22 244555664 135
Q ss_pred CCCCEEEEccCCCCCCC----hHHHHH---------------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD----YPGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~----~~~~~~---------------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|++||+|+...... ..+..+ .++ ..+.+-.++|++||...+-..
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~------------ 150 (244)
T d1yb1a_ 83 GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV------------ 150 (244)
T ss_dssp CCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH------------
T ss_pred CCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC------------
Confidence 68999999999754321 111111 111 235566789999997653211
Q ss_pred CCCCCHHHHHHHHHHHHHHH-------c---C--ceEEEeCceec
Q 024417 200 PIGRSPRTDVLLKAEKVILE-------F---G--GCVLRLAGLYK 232 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~-------~---~--~tIlRp~~vyG 232 (268)
|. ...|+.+|.+.+.+.+. + + ...+.||.+--
T Consensus 151 ~~-~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T 194 (244)
T d1yb1a_ 151 PF-LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNT 194 (244)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHH
T ss_pred CC-cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCC
Confidence 11 14799999876654432 2 2 57888887643
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.68 E-value=7.9e-08 Score=81.39 Aligned_cols=135 Identities=10% Similarity=0.014 Sum_probs=90.4
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc--------------cccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EATQK 142 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~--------------~~~~~ 142 (268)
.|.+||||+ +-||+.++++|.++ |++|++.+|++++.+. ++..+ +..+.+|. +....
T Consensus 10 nKvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 87 (251)
T d2c07a1 10 NKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 87 (251)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 467889997 89999999999999 9999999998765543 33333 34455554 13569
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
.|++||+|+...... |.+.+ +.++ ..+.+-.++|++||..-+-.. |.
T Consensus 88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------------~~ 155 (251)
T d2c07a1 88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN------------VG 155 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------TT
T ss_pred ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC------------CC
Confidence 999999998643321 21111 1111 134556799999997644221 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
...|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 156 -~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~ 195 (251)
T d2c07a1 156 -QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSD 195 (251)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-
T ss_pred -CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecc
Confidence 157999999888776654 2 578899998755
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.68 E-value=1.4e-07 Score=80.34 Aligned_cols=138 Identities=14% Similarity=0.123 Sum_probs=90.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----cC-CceeeccCc--------------cccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-GITPSLKWT--------------EATQ 141 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~~-~i~~~~~D~--------------~~~~ 141 (268)
+..|.+||||+ +-||+.++++|+++ |++|++.+|++++.+++. .. .+..+.+|. +...
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 81 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 44678999997 99999999999999 999999999876654432 22 244455554 1356
Q ss_pred CCCEEEEccCCCCCC-----C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSL-----D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
..|++||+|+..... + |.+.+ +.++ ..+++..++|++||...+-...
T Consensus 82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------- 151 (268)
T d2bgka1 82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------- 151 (268)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc----------
Confidence 899999999853211 1 11111 1111 1345567899999875432110
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+. ...|+.+|...+.+.+.. + +..+.||.+-.+
T Consensus 152 -~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 193 (268)
T d2bgka1 152 -GV-SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASP 193 (268)
T ss_dssp -TS-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCC
T ss_pred -cc-ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccCh
Confidence 11 137999999888776644 2 578899988665
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.66 E-value=9.7e-08 Score=82.86 Aligned_cols=140 Identities=9% Similarity=0.067 Sum_probs=89.8
Q ss_pred CCCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhc-------CCceeeccCc--------
Q 024417 78 SSGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-------MGITPSLKWT-------- 137 (268)
Q Consensus 78 ~~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~-------~~i~~~~~D~-------- 137 (268)
+|..+..|.+||||+ +-||+.++++|+++ |++|++.+|+.++.+. +.. ..+..+.+|.
T Consensus 6 ~~g~L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~ 83 (297)
T d1yxma1 6 APGLLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN 83 (297)
T ss_dssp CTTTTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence 355566789999997 99999999999999 9999999998765433 221 1244455664
Q ss_pred ------cccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCC
Q 024417 138 ------EATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNG 190 (268)
Q Consensus 138 ------~~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~ 190 (268)
+.....|++||+|+...... |.+.+ +.++ ..+.+..++|.+|+....+.
T Consensus 84 ~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~---- 159 (297)
T d1yxma1 84 LVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---- 159 (297)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC----
T ss_pred HHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc----
Confidence 13568999999998644321 21111 1111 12334567887765432111
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 191 ~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+.-+
T Consensus 160 ---------~~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 160 ---------PL-AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp ---------TT-CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred ---------cc-cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 11 157899999888776543 2 578899988654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.66 E-value=1.2e-07 Score=80.50 Aligned_cols=135 Identities=14% Similarity=0.143 Sum_probs=89.8
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc--------------cccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~--------------~~~~ 141 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|+.++.++ +...+ +..+.+|. +...
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999997 99999999999999 9999999998766543 33333 44455664 1356
Q ss_pred CCCEEEEccCCCCCCC-------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD-------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~ 201 (268)
..|++||+|+...... |.+.+ +.++ ..+.+-.++|++||...+... |
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~------------~- 154 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------------I- 154 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------T-
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc------------c-
Confidence 8999999998643221 21111 1111 134455689999986543211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 202 ~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
+...|+.+|...+.+.+.. + +..+-||.+..
T Consensus 155 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T 194 (255)
T d1fmca_ 155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILT 194 (255)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCS
T ss_pred ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcC
Confidence 1258999998888766543 2 57888998854
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.66 E-value=1.4e-07 Score=80.23 Aligned_cols=135 Identities=13% Similarity=0.049 Sum_probs=89.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh----c--C--CceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--M--GITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~----~--~--~i~~~~~D~---~-----------~ 139 (268)
..|.+||||+ +-||+.++++|+++ |++|.+.+|+.++.+... . . .+..+.+|. + .
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence 4578999997 99999999999999 999999999876644321 1 1 234455563 1 3
Q ss_pred cCCCCEEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
....|++||+|+.... . + |.+.+ +.++ .++.+-.++|++||...+-..
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------- 150 (258)
T d1iy8a_ 81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------- 150 (258)
T ss_dssp HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC----------
T ss_pred hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC----------
Confidence 5689999999985421 1 1 21111 1111 134566799999997643211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+.-
T Consensus 151 --~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T 191 (258)
T d1iy8a_ 151 --GN-QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWT 191 (258)
T ss_dssp --SS-BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCS
T ss_pred --CC-chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccC
Confidence 11 158999998887665543 2 57789998864
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.65 E-value=1.6e-07 Score=79.44 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=87.8
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc--------------cccC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT--------------EATQ 141 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~--------------~~~~ 141 (268)
+..|++||||+ +-||+.++++|.++ |++|.+.+|+.++.+.+.+ ..+..+.+|. +...
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 44678999997 99999999999999 9999999998766544321 2355556664 1356
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCC-CeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gv-kr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..|++||+|+...... |.+.+ +.++ +.+.+. .++|++||..-+-..
T Consensus 82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~------------ 149 (251)
T d1zk4a1 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------------ 149 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC------------
T ss_pred CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC------------
Confidence 8999999998654321 22111 1111 123343 478999986532110
Q ss_pred CCCCCHHHHHHHHHHHHHH---------HcC--ceEEEeCceec
Q 024417 200 PIGRSPRTDVLLKAEKVIL---------EFG--GCVLRLAGLYK 232 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~---------~~~--~tIlRp~~vyG 232 (268)
|. ...|+.+|...+.+.+ ..+ +..+.||.+..
T Consensus 150 ~~-~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T 192 (251)
T d1zk4a1 150 PS-LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKT 192 (251)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCC
T ss_pred CC-chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCC
Confidence 11 1579999977665433 223 56789998854
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.64 E-value=2e-07 Score=79.14 Aligned_cols=136 Identities=16% Similarity=0.130 Sum_probs=89.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc---c-----------cc-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT---E-----------AT- 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~---~-----------~~- 140 (268)
+.|++||||+ +-||+.++++|+++ |++|++++|++++.++ +...+ +..+.+|. + ..
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 3578999996 99999999999999 9999999998766443 22333 33445554 1 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|+++|+|+...... |.+.+ +.++ ..+.+..++|++||.......
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~------------ 150 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL------------ 150 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC------------
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc------------
Confidence 35899999998654321 21111 1111 134567799999997653211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...|.+.+.+ + .-.+.||.+.-+
T Consensus 151 ~~-~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~ 192 (258)
T d1ae1a_ 151 PS-VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTP 192 (258)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC--
T ss_pred cc-chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCc
Confidence 11 258999998888776654 2 578899999754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=1.2e-07 Score=80.39 Aligned_cols=136 Identities=17% Similarity=0.132 Sum_probs=86.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC----ceeeccCc---c-----------c
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG----ITPSLKWT---E-----------A 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~----i~~~~~D~---~-----------~ 139 (268)
+.|.+||||+ +-||++++++|.++ |++|++.+|++++.+++ ...+ +..+.+|. + .
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3567999997 99999999999999 99999999987765543 3222 34455664 1 3
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhc--CCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWN--GEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~--gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
....|++||+|+....+. |.+.+ +.++ ..+. +-.++|++||..-+...
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--------- 157 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--------- 157 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---------
Confidence 568999999998654321 21111 1111 1222 24689999997643211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc---------C--ceEEEeCcee
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLY 231 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vy 231 (268)
|.... ..|+.+|...+.+.+.+ + ...+-||.+-
T Consensus 158 p~~~~--~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~ 201 (257)
T d1xg5a_ 158 PLSVT--HFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVE 201 (257)
T ss_dssp SCGGG--HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred CCccc--HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCC
Confidence 11011 46999998877665321 2 4667787664
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.63 E-value=1.8e-07 Score=79.41 Aligned_cols=135 Identities=14% Similarity=0.061 Sum_probs=88.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC--ceeeccCc---c-----------ccC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--ITPSLKWT---E-----------ATQ 141 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~--i~~~~~D~---~-----------~~~ 141 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|++++.+++ ...+ +..+.+|. + ...
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 3578999997 99999999999999 99999999987665442 2333 33445553 1 233
Q ss_pred -CCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 142 -KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 142 -~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
..|++||+|+...... |.+.+ +.++ ..+.+-.++|++||..-....
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------ 152 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV------------ 152 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC------------
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc------------
Confidence 5899999998654321 21111 1111 134556799999996542211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc----C-----ceEEEeCceec
Q 024417 200 PIGRSPRTDVLLKAEKVILEF----G-----GCVLRLAGLYK 232 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~----~-----~tIlRp~~vyG 232 (268)
| ....|+.+|...+.+.+.. + +..+.||.+--
T Consensus 153 ~-~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T 193 (259)
T d2ae2a_ 153 P-YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIAT 193 (259)
T ss_dssp T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCS
T ss_pred c-cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccC
Confidence 1 1257999998888766543 2 57788998853
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.61 E-value=5.1e-07 Score=75.81 Aligned_cols=139 Identities=12% Similarity=-0.014 Sum_probs=86.9
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHh---cCCCCeEEEEeCCCCcchhhhc-----CCceeeccCc---c------------
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT---E------------ 138 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~---~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~---~------------ 138 (268)
.||+|||||+ +-||+.++++|++ + |++|++.+|++++.+.+.+ .++..+.+|. +
T Consensus 1 ~MKtilITGas~GIG~a~a~~l~~~a~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 78 (248)
T d1snya_ 1 HMNSILITGCNRGLGLGLVKALLNLPQP--PQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 78 (248)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSC--CSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHH
Confidence 3889999997 8999999999974 5 9999999999887765432 2455566664 1
Q ss_pred -ccCCCCEEEEccCCCCCC----C-----hHHHH-----------HHHH--HHh-----------cCCCeEEEEccCeee
Q 024417 139 -ATQKFPYVIFCAPPSRSL----D-----YPGDV-----------RLAA--LSW-----------NGEGSFLFTSSSAIY 184 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~----~-----~~~~~-----------~~~~--~~~-----------~gvkr~V~~SS~~vY 184 (268)
.....|++||+|+..... + +.+.+ +.++ +++ .+..++|.+||..
T Consensus 79 ~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~-- 156 (248)
T d1snya_ 79 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL-- 156 (248)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG--
T ss_pred hhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc--
Confidence 124699999999853321 1 11111 1111 111 1356899999854
Q ss_pred cCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 185 DCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 185 g~~~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|.... +..+. ...|+.+|.+.+.+.+.. + ...+.||.+--+
T Consensus 157 g~~~~-------~~~~~-~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 157 GSIQG-------NTDGG-MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp GCSTT-------CCSCC-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred cccCC-------CCCCC-hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 21100 11111 147999998777655433 2 577889988543
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.60 E-value=2.6e-07 Score=78.36 Aligned_cols=135 Identities=10% Similarity=0.017 Sum_probs=88.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC-cchhh----hc---CCceeeccCc---c-----------cc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDEL----IN---MGITPSLKWT---E-----------AT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~-~~~~l----~~---~~i~~~~~D~---~-----------~~ 140 (268)
.|.+||||+ +-||+.++++|+++ |++|++.+|++. ..+.+ .. ..+..+.+|. + ..
T Consensus 4 gK~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 4 GKVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 467899997 99999999999999 999999999753 22222 11 1344455664 1 34
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|++||+|+...... |.+.+ +.++ .++.+-.++|++||...+...
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------ 149 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS------------ 149 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc------------
Confidence 68999999998654321 21111 1111 134455799999997643211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 150 ~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 150 AN-KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-
T ss_pred CC-cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCCh
Confidence 11 157999999888766543 2 578899988644
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.60 E-value=3.6e-07 Score=77.69 Aligned_cols=136 Identities=14% Similarity=0.086 Sum_probs=88.0
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcCC--ceeeccCc--------------ccc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT--------------EAT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~~--i~~~~~D~--------------~~~ 140 (268)
..|.+||||+ +-||+.++++|.++ |++|++.+|+.+. .+ ++...+ +..+.+|. +..
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3578999997 99999999999999 9999999997543 22 233334 33445554 134
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcC-CCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...|++||+|+...... |.+.+ +.++ ..+.+ ...+|++||..-+-.
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~------------ 151 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP------------ 151 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC------------
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc------------
Confidence 68999999998654321 21111 1111 12333 456889998653221
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...+.+.+.. + +..+-||.+.-+
T Consensus 152 ~~~-~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~ 194 (261)
T d1geea_ 152 WPL-FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194 (261)
T ss_dssp CTT-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSG
T ss_pred Ccc-ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCH
Confidence 111 157999999888776544 2 578899998644
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.59 E-value=1.9e-07 Score=79.34 Aligned_cols=136 Identities=19% Similarity=0.143 Sum_probs=83.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC--CceeeccCc---c-----------cc-
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM--GITPSLKWT---E-----------AT- 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~--~i~~~~~D~---~-----------~~- 140 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|++++.+++ ... .+..+.+|. + ..
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 3578999997 99999999999999 99999999987665443 222 344455554 1 23
Q ss_pred CCCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|++||+|+..... + |.+.+ +.++ .++.+..++|++||..-+-..
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------ 152 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA------------ 152 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------------
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc------------
Confidence 4689999999864321 1 21111 1111 134566799999997643211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
| ....|+.+|...+.+.+.. + +..+-||.+--+
T Consensus 153 ~-~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 153 S-VGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC--
T ss_pred c-ccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCH
Confidence 1 1158999999888766543 2 578889888644
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.59 E-value=3.7e-07 Score=77.26 Aligned_cols=136 Identities=8% Similarity=-0.002 Sum_probs=89.4
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-------CCceeeccCc---------------cc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWT---------------EA 139 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-------~~i~~~~~D~---------------~~ 139 (268)
..|.|||||+ +-||..++++|+++ |++|+++.|+.++.+.+.+ .++..+..|. +.
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 3578999997 99999999999999 9999999887665443321 1233444442 13
Q ss_pred cCCCCEEEEccCCCCCCChHHHHH-----------HHH--H-Hh-c-CCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLDYPGDVR-----------LAA--L-SW-N-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~~~~~~-----------~~~--~-~~-~-gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
...+|++|++|+....++|.+.+. .++ . ++ . ...++|++||..-+... | +.
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------------~-~~ 148 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------H-QV 148 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------T-TS
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------------C-CC
Confidence 568999999999876555432211 111 1 11 1 34679999987653221 1 11
Q ss_pred CHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
..|+.+|.....+.+.. + +..+-||.+..+
T Consensus 149 ~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 149 PVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 57999998877655543 2 588899998743
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.59 E-value=2.2e-07 Score=79.57 Aligned_cols=137 Identities=15% Similarity=0.099 Sum_probs=87.9
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC-----ceeeccCc---c----------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG-----ITPSLKWT---E---------- 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~-----i~~~~~D~---~---------- 138 (268)
+..|++||||+ +-||+.++++|+++ |++|++.+|+.++.++ +.+.+ +..+.+|. +
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 79 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHH
Confidence 34578999997 99999999999999 9999999998765543 22222 34455664 1
Q ss_pred -ccCCCCEEEEccCCCCCC-------C---hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCC
Q 024417 139 -ATQKFPYVIFCAPPSRSL-------D---YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~-------~---~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E 194 (268)
.....|++||+|+..... . |.+.+. .++ +.+.+..+++++||..-+...
T Consensus 80 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~------- 152 (274)
T d1xhla_ 80 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH------- 152 (274)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC-------
T ss_pred HHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC-------
Confidence 346899999999854221 0 211111 111 133455677777765432111
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 195 ~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
| +...|+.+|...+.+.+.. + +..+.||.+--+
T Consensus 153 -----~-~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 153 -----S-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp -----T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred -----C-CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 1 1157999998888766543 2 578899998643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.58 E-value=2.3e-07 Score=78.61 Aligned_cols=132 Identities=11% Similarity=0.023 Sum_probs=86.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCC--ceeeccCc--------------cccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG--ITPSLKWT--------------EATQKF 143 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~--i~~~~~D~--------------~~~~~~ 143 (268)
|.+||||+ +-||+.++++|+++ |++|++.+|++++.++ +...+ +..+.+|. +.....
T Consensus 3 KValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 45689997 99999999999999 9999999998766543 33333 34455664 135689
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH----HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~~~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p 200 (268)
|++||+|+...... |.+.+ +.++ ..+.+..++|.+||..-+-.. |
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~------------~ 148 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV------------V 148 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC------------T
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc------------c
Confidence 99999998654321 21111 1111 123345689999887543211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C-----ceEEEeCcee
Q 024417 201 IGRSPRTDVLLKAEKVILEF----G-----GCVLRLAGLY 231 (268)
Q Consensus 201 ~~~~~y~~sK~~aE~~l~~~----~-----~tIlRp~~vy 231 (268)
+...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 149 -~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 149 -HAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVE 187 (257)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBC
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCC
Confidence 1157999998888776543 2 4778899874
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=3.1e-07 Score=77.60 Aligned_cols=133 Identities=12% Similarity=-0.013 Sum_probs=87.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc----CCceeeccCc--------------ccc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSLKWT--------------EAT 140 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~----~~i~~~~~D~--------------~~~ 140 (268)
.|.+||||+ +-||+.++++|+++ |++|.+.+|+.++.++. .. ..+..+.+|. +..
T Consensus 3 GKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 80 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 478999997 99999999999999 99999999987654432 11 1234445564 134
Q ss_pred CCCCEEEEccCCCCCCChHHHHH-----------HHH--HHhc--C-CCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLDYPGDVR-----------LAA--LSWN--G-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~~~~~~-----------~~~--~~~~--g-vkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
...|++||+|+.....+|.+.+. ..+ +.+. + ..++|++||..-+-.. |. ..
T Consensus 81 G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~------------~~-~~ 147 (254)
T d2gdza1 81 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------AQ-QP 147 (254)
T ss_dssp SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------TT-CH
T ss_pred CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC------------CC-cc
Confidence 68999999999876655433221 111 1121 2 2569999997643211 11 15
Q ss_pred HHHHHHHHHHHHHH------H---cC--ceEEEeCcee
Q 024417 205 PRTDVLLKAEKVIL------E---FG--GCVLRLAGLY 231 (268)
Q Consensus 205 ~y~~sK~~aE~~l~------~---~~--~tIlRp~~vy 231 (268)
.|+.+|...+.+.+ + .+ +..+.||.+-
T Consensus 148 ~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~ 185 (254)
T d2gdza1 148 VYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVN 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCC
Confidence 79999987776543 2 22 5788899874
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.57 E-value=2.5e-07 Score=77.71 Aligned_cols=132 Identities=14% Similarity=0.114 Sum_probs=86.6
Q ss_pred EEEEcc-cHHHHHHHHHHHhcCCCCe-------EEEEeCCCCcchhh----hcCC--ceeeccCc--------------c
Q 024417 87 LLIVGP-GVLGRLVAEQWRQEHPGCQ-------IYGQTMTADHHDEL----INMG--ITPSLKWT--------------E 138 (268)
Q Consensus 87 VLI~Ga-G~IG~~L~~~L~~~~~G~~-------V~~~~R~~~~~~~l----~~~~--i~~~~~D~--------------~ 138 (268)
|||||+ +-||+.++++|.++ |++ |...+|+.++.+++ ...+ +..+.+|. +
T Consensus 4 vlITGas~GIG~aia~~la~~--G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEccCCCHHHHHHHHHHHHh--CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 689997 89999999999999 987 88889987665443 3333 33445554 1
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
.....|++||+|+...... |.+.+ +.++ +++.+-.++|++||..-+...
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------- 151 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------- 151 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC----------
Confidence 3568999999998654321 21111 1111 134556799999997643211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + ...+.||.+--+
T Consensus 152 --~~-~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~ 193 (240)
T d2bd0a1 152 --RH-SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP 193 (240)
T ss_dssp --TT-CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCST
T ss_pred --CC-ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCc
Confidence 11 158999998777665543 2 578889988543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.56 E-value=2.5e-07 Score=78.31 Aligned_cols=135 Identities=10% Similarity=0.009 Sum_probs=87.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc--------------cccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~--------------~~~~~~ 143 (268)
+..|++||||+ +-||+.++++|+++ |++|++.+|++++.+++.+ .....+.+|. +.....
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 81 (253)
T d1hxha_ 4 LQGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 34578999996 99999999999999 9999999998766554432 2233444553 135689
Q ss_pred CEEEEccCCCCCCC--------hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|++||+|+...... |.+.+. .++ +++ .-.++|++||...+-.. |.
T Consensus 82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-~~G~Iv~isS~~~~~~~------------~~- 147 (253)
T d1hxha_ 82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE-TGGSIINMASVSSWLPI------------EQ- 147 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTSCC------------TT-
T ss_pred CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCceecccchhhhcCc------------cc-
Confidence 99999998644311 221111 111 122 33789999997642211 11
Q ss_pred CCHHHHHHHHHHHHHHHc---------C--ceEEEeCceec
Q 024417 203 RSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYK 232 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vyG 232 (268)
...|+.+|...+.+.+.. + +..+-||.+..
T Consensus 148 ~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T 188 (253)
T d1hxha_ 148 YAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYT 188 (253)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECC
T ss_pred cccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcC
Confidence 157999998777655432 2 35678888753
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.54 E-value=1.2e-07 Score=80.24 Aligned_cols=133 Identities=14% Similarity=0.044 Sum_probs=88.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC---c-----------cccCCCCEEEEcc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---T-----------EATQKFPYVIFCA 150 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D---~-----------~~~~~~D~Vi~~a 150 (268)
+.||||+ +-||+.++++|.++ |++|.+.+|+.++.++++........+| . +.....|++||+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6799997 99999999999999 9999999998777666543322222222 1 1356899999999
Q ss_pred CCCC-CC---C-----hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHH
Q 024417 151 PPSR-SL---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (268)
Q Consensus 151 ~~~~-~~---~-----~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~ 208 (268)
+... .. + |.+.+. .++ +++.+-.++|++||...+... |. ...|+.
T Consensus 80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~------------~~-~~~Y~a 146 (252)
T d1zmta1 80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------KE-LSTYTS 146 (252)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------TT-CHHHHH
T ss_pred cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc------------cc-cccccc
Confidence 7532 11 1 222111 111 134456799999997643311 11 157999
Q ss_pred HHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 209 VLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 209 sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
+|...+.+.+.+ + +..+.||.+-.+
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 180 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSE 180 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCB
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCc
Confidence 998888766543 2 578899988654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.52 E-value=3.1e-07 Score=78.39 Aligned_cols=70 Identities=17% Similarity=0.269 Sum_probs=53.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCC-----ceeeccCc--------------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-------------- 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~-----i~~~~~D~-------------- 137 (268)
+..|++||||+ +-||+.++++|.++ |++|++.+|++++.+++ .+.+ +..+.+|.
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 80 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 80 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence 44678999997 99999999999999 99999999987665432 2222 34555664
Q ss_pred cccCCCCEEEEccCCC
Q 024417 138 EATQKFPYVIFCAPPS 153 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~ 153 (268)
+.....|++||+|+..
T Consensus 81 ~~~g~iDilvnnAG~~ 96 (272)
T d1xkqa_ 81 KQFGKIDVLVNNAGAA 96 (272)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHhCCceEEEeCCccc
Confidence 1346899999999864
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.52 E-value=1.4e-07 Score=71.83 Aligned_cols=88 Identities=11% Similarity=0.012 Sum_probs=63.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCc---c-----ccCCCCEEEEccCCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT---E-----ATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~---~-----~~~~~D~Vi~~a~~~~~ 155 (268)
|+|+|+|+|.+|+.|++.|.++ |++|++++.++++.+.+.. .+...+.+|. + -+.++|.++-+....
T Consensus 1 M~IvI~G~G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d-- 76 (132)
T d1lssa_ 1 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE-- 76 (132)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH--
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH--
Confidence 6899999999999999999999 9999999999888777654 3777777774 1 367899888754332
Q ss_pred CChHHHHHHHHHHhcCCCeEEEE
Q 024417 156 LDYPGDVRLAALSWNGEGSFLFT 178 (268)
Q Consensus 156 ~~~~~~~~~~~~~~~gvkr~V~~ 178 (268)
-.+-+.....+..+++++|-.
T Consensus 77 --~~N~~~~~~~k~~~~~~iI~~ 97 (132)
T d1lssa_ 77 --EVNLMSSLLAKSYGINKTIAR 97 (132)
T ss_dssp --HHHHHHHHHHHHTTCCCEEEE
T ss_pred --HHHHHHHHHHHHcCCceEEEE
Confidence 111111222356677777743
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.51 E-value=4.1e-07 Score=77.09 Aligned_cols=143 Identities=13% Similarity=0.017 Sum_probs=88.6
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-----c--CCceeeccCc--------------ccc
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----N--MGITPSLKWT--------------EAT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-----~--~~i~~~~~D~--------------~~~ 140 (268)
..|++||||+ +-||+.++++|+++ |++|++.+|+.++..++. . ..+..+.+|. +..
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3578999997 99999999999999 999999999987654321 1 1344555664 135
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH---HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~---~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
...|++||+|+...... |.+.+ +.++ .++.+...++..++...+..... .+ . +
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~-~~--~-~- 160 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS-SL--N-G- 160 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE-ET--T-E-
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccc-cc--c-c-
Confidence 68999999998654321 21111 1111 12344556666666554322110 00 0 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.+ ....|+.+|...+.+.+.. + ...+.||.+--+
T Consensus 161 ~~-~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~ 203 (260)
T d1h5qa_ 161 SL-TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 203 (260)
T ss_dssp EC-SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCG
T ss_pred Cc-cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCc
Confidence 11 1257999999888766543 2 578889988543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.51 E-value=2.9e-07 Score=78.24 Aligned_cols=69 Identities=17% Similarity=0.217 Sum_probs=52.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcC-----CceeeccCc--------------
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----GITPSLKWT-------------- 137 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~-----~i~~~~~D~-------------- 137 (268)
+..|.+||||+ +-||+.++++|+++ |++|.+.+|+.++.+++ ... .+..+.+|.
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~ 80 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL 80 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence 44578899997 99999999999999 99999999987665443 222 245556664
Q ss_pred cccCCCCEEEEccCC
Q 024417 138 EATQKFPYVIFCAPP 152 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~ 152 (268)
+.....|++||+|+.
T Consensus 81 ~~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 81 GKFGKLDILVNNAGA 95 (264)
T ss_dssp HHHSCCCEEEECCC-
T ss_pred HHhCCCCEeeccccc
Confidence 135689999999985
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.50 E-value=1.3e-07 Score=79.43 Aligned_cols=135 Identities=15% Similarity=0.105 Sum_probs=85.5
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCC--ceeeccCc---c-----------ccCCC
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMG--ITPSLKWT---E-----------ATQKF 143 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~--i~~~~~D~---~-----------~~~~~ 143 (268)
+..|++||||+ +-||+.++++|.++ |++|++.+|+.++..++. +.+ +..+.+|. + .....
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 34678999997 99999999999999 999999999877654432 223 34455664 1 34689
Q ss_pred CEEEEccCCCCCCC--------hHHHHH-HH----------HHHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDVR-LA----------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~-~~----------~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~ 204 (268)
|++||+|+...... |.+.+. ++ +......+.++.+|+.+.... | +..
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-------------~-~~~ 146 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-------------F-GLA 146 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-------------H-HHH
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-------------c-Ccc
Confidence 99999997543321 222111 00 112233345555555332110 1 114
Q ss_pred HHHHHHHHHHHHHHHc----C-----ceEEEeCceec
Q 024417 205 PRTDVLLKAEKVILEF----G-----GCVLRLAGLYK 232 (268)
Q Consensus 205 ~y~~sK~~aE~~l~~~----~-----~tIlRp~~vyG 232 (268)
.|+.+|...|.+.+.. + +..+.||.+-.
T Consensus 147 ~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T 183 (241)
T d2a4ka1 147 HYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQT 183 (241)
T ss_dssp HHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCC
T ss_pred ccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCC
Confidence 7888998888776654 2 57889998843
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.50 E-value=4.4e-07 Score=77.64 Aligned_cols=134 Identities=17% Similarity=0.108 Sum_probs=86.7
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc--------------cccCCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQKFP 144 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~--------------~~~~~~D 144 (268)
..|++||||+ +-||+.++++|.++ |++|++.+|++++.+++.. ..+..+.+|. +.....|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence 3478999997 99999999999999 9999999998776655432 2244455553 1356899
Q ss_pred EEEEccCCCCC--------CC-----hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 145 YVIFCAPPSRS--------LD-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 145 ~Vi~~a~~~~~--------~~-----~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
++||+|+.... .+ |.+.+ +.++ +++.+ .++|+++|..-+-..
T Consensus 82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~----------- 149 (276)
T d1bdba_ 82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPN----------- 149 (276)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTT-----------
T ss_pred cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCC-----------
Confidence 99999985321 11 11111 1111 12333 678888876432110
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc----C----ceEEEeCceec
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYK 232 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~----~----~tIlRp~~vyG 232 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+--
T Consensus 150 -~~-~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T 189 (276)
T d1bdba_ 150 -GG-GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINS 189 (276)
T ss_dssp -SS-CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCS
T ss_pred -CC-CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEec
Confidence 11 157999998887766543 2 57788988753
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=4.1e-07 Score=77.41 Aligned_cols=134 Identities=13% Similarity=0.118 Sum_probs=85.1
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CC--ceeeccCc--------------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG--ITPSLKWT--------------EA 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~--i~~~~~D~--------------~~ 139 (268)
+..|++||||+ +-||+.++++|+++ |++|++++|+.++.+++.. .+ ...+..|. +.
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 89 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL 89 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHH
Confidence 45689999997 89999999999999 9999999999876654321 12 22233332 13
Q ss_pred cCCCCEEEEccCCCCCC-----C---hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSL-----D---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~-----~---~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
....|+++++|+..... + +.+.+ +.++ .+ .+-.++|++||...+-..
T Consensus 90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~~~~~~~----------- 157 (269)
T d1xu9a_ 90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAY----------- 157 (269)
T ss_dssp HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEGGGTSCC-----------
T ss_pred hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccchhcCCC-----------
Confidence 56899999999864321 1 11111 1111 12 234689999987642211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc---------C--ceEEEeCcee
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLY 231 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~---------~--~tIlRp~~vy 231 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 158 -p~-~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~ 199 (269)
T d1xu9a_ 158 -PM-VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID 199 (269)
T ss_dssp -TT-CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred -CC-chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCC
Confidence 11 258999998877654432 2 3568898874
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.48 E-value=6.4e-07 Score=77.74 Aligned_cols=138 Identities=15% Similarity=0.108 Sum_probs=86.6
Q ss_pred CCCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc---------hh----hhcCCc--eeeccCc-----
Q 024417 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---------DE----LINMGI--TPSLKWT----- 137 (268)
Q Consensus 79 ~~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~---------~~----l~~~~i--~~~~~D~----- 137 (268)
|.++..|.+||||+ +-||+.++++|+++ |++|++.+|+.+.. ++ +...+. .....|.
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEK 79 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHH
Confidence 44556688999997 99999999999999 99999998864321 11 111121 1222232
Q ss_pred ------cccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCC
Q 024417 138 ------EATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNG 190 (268)
Q Consensus 138 ------~~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~ 190 (268)
+.....|++||+|+...... |.+.+ +.++ +++++-.++|++||...+-..
T Consensus 80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~--- 156 (302)
T d1gz6a_ 80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN--- 156 (302)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC---
T ss_pred HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC---
Confidence 13568999999999754322 21111 1111 134556799999997643211
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 191 ~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
| +...|+.+|...+.+.+.. + +..+-|+.+-
T Consensus 157 ---------~-~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~ 196 (302)
T d1gz6a_ 157 ---------F-GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGS 196 (302)
T ss_dssp ---------T-TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCS
T ss_pred ---------C-CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCC
Confidence 1 1158999998887765543 2 4677887653
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.47 E-value=1.1e-07 Score=74.90 Aligned_cols=66 Identities=17% Similarity=0.306 Sum_probs=53.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCc-eeeccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-TPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i-~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
|||.|+|+|.+|+.+++.|.+. |++|++.+|+++..+...+.++ .....+.+.++++|+||.+.++
T Consensus 1 MkI~iIG~G~mG~~lA~~l~~~--g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~ 67 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPI 67 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcH
Confidence 5899999999999999999999 9999999998777666555553 2333445788999999987764
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.47 E-value=9.4e-07 Score=74.35 Aligned_cols=135 Identities=14% Similarity=0.053 Sum_probs=83.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-eEEEEeCCCCc---ch----hhhcCC--ceeeccCc---c----------cc
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---HD----ELINMG--ITPSLKWT---E----------AT 140 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-~V~~~~R~~~~---~~----~l~~~~--i~~~~~D~---~----------~~ 140 (268)
.++||||+ |-||+.++++|.++ |+ .|+.+.|+..+ .. ++...+ +..+.+|. + ..
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 47999996 99999999999999 98 57777886322 22 223334 34445564 1 12
Q ss_pred CCCCEEEEccCCCCCCC----hHHHHH-----------HHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~----~~~~~~-----------~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~ 203 (268)
...|.|+|+++...... ..+.++ ++. ....+..++|++||....-... +.
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~-------------~~ 154 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAP-------------GL 154 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCT-------------TC
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCc-------------cc
Confidence 36889999998754322 111111 111 1234567899999876432111 11
Q ss_pred CHHHHHHHHHHHHHHHc---C--ceEEEeCceecCC
Q 024417 204 SPRTDVLLKAEKVILEF---G--GCVLRLAGLYKAD 234 (268)
Q Consensus 204 ~~y~~sK~~aE~~l~~~---~--~tIlRp~~vyG~~ 234 (268)
..|+.+|...|.+.++. + ++.+.||.+.+++
T Consensus 155 ~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 155 GGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG 190 (259)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred HHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCc
Confidence 46888998877665544 3 6889999887664
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.46 E-value=5.1e-07 Score=75.18 Aligned_cols=128 Identities=12% Similarity=0.104 Sum_probs=79.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc--------------c--ccCCCCEEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------------E--ATQKFPYVI 147 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~--------------~--~~~~~D~Vi 147 (268)
.||||||+ |-||+.++++|+++ |++|++++|+++....- . ....+|. + .....|++|
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li 76 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQADS---N-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 76 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTSSE---E-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhcccc---c-ceeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence 48999997 99999999999999 99999999986542110 0 0011110 1 235689999
Q ss_pred EccCCCCC-----CChHHHHH-----HHH---------H-HhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHH
Q 024417 148 FCAPPSRS-----LDYPGDVR-----LAA---------L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (268)
Q Consensus 148 ~~a~~~~~-----~~~~~~~~-----~~~---------~-~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~ 207 (268)
|+|+.... .+..+... |+. . ....-.++|++||...+... |. ...|+
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~------------~~-~~~Y~ 143 (235)
T d1ooea_ 77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------PS-MIGYG 143 (235)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TT-BHHHH
T ss_pred ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc------------cc-ccchH
Confidence 99985321 11112111 110 0 11123689999987643311 11 15899
Q ss_pred HHHHHHHHHHHHc----C-------ceEEEeCcee
Q 024417 208 DVLLKAEKVILEF----G-------GCVLRLAGLY 231 (268)
Q Consensus 208 ~sK~~aE~~l~~~----~-------~tIlRp~~vy 231 (268)
.+|.+.+.+.+.+ . ...+.|+.+-
T Consensus 144 asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~ 178 (235)
T d1ooea_ 144 MAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLD 178 (235)
T ss_dssp HHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBC
T ss_pred HHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCc
Confidence 9999988877643 1 3556888774
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.45 E-value=5.9e-07 Score=75.52 Aligned_cols=132 Identities=13% Similarity=0.063 Sum_probs=85.4
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC-CCcchh----hhcCC--ceeeccCc--------------cccCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINMG--ITPSLKWT--------------EATQKF 143 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~~----l~~~~--i~~~~~D~--------------~~~~~~ 143 (268)
-|||||+ +-||+.++++|+++ |++|+..+++ ++..+. ++..+ +..+.+|. +.....
T Consensus 3 V~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789997 99999999999999 9999887654 333332 22223 33445554 135689
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCC
Q 024417 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (268)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~ 202 (268)
|++||+|+...... |.+.+ +.++ +.+++-.++|++||..-+-.. | +
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------------~-~ 147 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN------------I-G 147 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------T-T
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC------------C-C
Confidence 99999998654321 21111 1111 134556799999997654211 1 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--ceEEEeCceec
Q 024417 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYK 232 (268)
Q Consensus 203 ~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG 232 (268)
...|+.+|...+.+.+.. + ...+.||.+--
T Consensus 148 ~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T 186 (244)
T d1edoa_ 148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIAS 186 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCS
T ss_pred CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceecc
Confidence 157999998888766543 2 57888988853
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.41 E-value=1.8e-06 Score=73.36 Aligned_cols=138 Identities=13% Similarity=0.088 Sum_probs=86.2
Q ss_pred CCCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcCC--ceeeccCc--------------
Q 024417 80 GGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT-------------- 137 (268)
Q Consensus 80 ~~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~~--i~~~~~D~-------------- 137 (268)
..+..|++||||+ +-||+.++++|+++ |++|++.+|+.++ .+ .+.+.+ +..+.+|.
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence 3455689999997 99999999999999 9999999887543 22 233333 33444553
Q ss_pred cccCCCCEEEEccCCCCCCC--------hHHHHH-----------HHHHHhcCCCeEEEEccCeeecCCCCCCCCCCCCC
Q 024417 138 EATQKFPYVIFCAPPSRSLD--------YPGDVR-----------LAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~~~~~--------~~~~~~-----------~~~~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~ 198 (268)
+.....|++||+++...... |.+.+. .++.....-.++++++|.. +... +.
T Consensus 92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~--~~~~--------~~ 161 (272)
T d1g0oa_ 92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSIT--GQAK--------AV 161 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGG--GTCS--------SC
T ss_pred HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccc--cccc--------cc
Confidence 13568999999998654321 211111 1111122335777777643 2110 01
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 199 ~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
+ ....|+.+|...+.+.+.. + +..+.||.+-
T Consensus 162 -~-~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~ 201 (272)
T d1g0oa_ 162 -P-KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIK 201 (272)
T ss_dssp -S-SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred -c-chhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcC
Confidence 1 1157999999888777643 2 5788999885
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.39 E-value=1.7e-06 Score=71.99 Aligned_cols=133 Identities=12% Similarity=0.092 Sum_probs=80.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc-----Cc------cc--cCCCCEEEEc
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK-----WT------EA--TQKFPYVIFC 149 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~-----D~------~~--~~~~D~Vi~~ 149 (268)
.|+|||||+ |-||+.++++|+++ |++|.++++........ ......... |. +. ..+.|++||+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInn 78 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEASA-SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV 78 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSSE-EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccccccc-cceeecccCcHHHHHHHHHHHHHHhCCCCceEEEEC
Confidence 478999997 99999999999999 99999999865432110 000000000 10 11 2358999999
Q ss_pred cCCCCC----CC-hHHHHHH-----H------H----HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCCCCCCCHHHHH
Q 024417 150 APPSRS----LD-YPGDVRL-----A------A----LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (268)
Q Consensus 150 a~~~~~----~~-~~~~~~~-----~------~----~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~p~~~~~y~~s 209 (268)
|+.... .+ ..+.... + . .....-.++|++||...+... |. ...|+.+
T Consensus 79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------------~~-~~~Y~as 145 (236)
T d1dhra_ 79 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------PG-MIGYGMA 145 (236)
T ss_dssp CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TT-BHHHHHH
T ss_pred CcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc------------cC-CcccHHH
Confidence 984221 11 1111111 1 0 011223689999997643211 11 1589999
Q ss_pred HHHHHHHHHHc---------C--ceEEEeCceec
Q 024417 210 LLKAEKVILEF---------G--GCVLRLAGLYK 232 (268)
Q Consensus 210 K~~aE~~l~~~---------~--~tIlRp~~vyG 232 (268)
|...+.+.+.. + +..+.||.+.-
T Consensus 146 Kaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T 179 (236)
T d1dhra_ 146 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDT 179 (236)
T ss_dssp HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEEC
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcC
Confidence 99988877653 1 47788988864
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.39 E-value=1.8e-06 Score=72.47 Aligned_cols=68 Identities=12% Similarity=0.097 Sum_probs=52.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhc---CCceeeccCc---c-----------cc--C
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELIN---MGITPSLKWT---E-----------AT--Q 141 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~---~~i~~~~~D~---~-----------~~--~ 141 (268)
.++|||||+ +-||+.++++|+++ |+ .|++..|+.++.+++.+ .++..+.+|. + .. .
T Consensus 3 ~KtilITGassGIG~a~a~~la~~--G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 468999997 99999999999999 85 78888999887766644 2456666664 1 11 2
Q ss_pred CCCEEEEccCCC
Q 024417 142 KFPYVIFCAPPS 153 (268)
Q Consensus 142 ~~D~Vi~~a~~~ 153 (268)
..|++||+|+..
T Consensus 81 ~idilinnAG~~ 92 (250)
T d1yo6a1 81 GLSLLINNAGVL 92 (250)
T ss_dssp CCCEEEECCCCC
T ss_pred CeEEEEEcCccc
Confidence 599999999853
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.31 E-value=8.5e-07 Score=67.18 Aligned_cols=91 Identities=10% Similarity=0.215 Sum_probs=66.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccCCCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~~~~~~ 156 (268)
|+++|+|+|.+|+.+++.|.++ |++|++++.+++..+.+...+...+.+|. + -+.++|.||-+.+....
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~--g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~- 77 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ- 77 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHH-
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHH-
Confidence 5789999999999999999999 99999999999888888777887777774 1 36789998876654321
Q ss_pred ChHHHHHHHHHHhcCCCeEEEEcc
Q 024417 157 DYPGDVRLAALSWNGEGSFLFTSS 180 (268)
Q Consensus 157 ~~~~~~~~~~~~~~gvkr~V~~SS 180 (268)
...+.....+..+..+++-...
T Consensus 78 --~~~~~~~~~~~~~~~~iiar~~ 99 (134)
T d2hmva1 78 --ASTLTTLLLKELDIPNIWVKAQ 99 (134)
T ss_dssp --HHHHHHHHHHHTTCSEEEEECC
T ss_pred --hHHHHHHHHHHcCCCcEEeecc
Confidence 1111122235567777665554
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.27 E-value=4.9e-07 Score=73.13 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeecc---Cc----cccCCCCEEE
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLK---WT----EATQKFPYVI 147 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~---D~----~~~~~~D~Vi 147 (268)
.+..|+|+|||+ |.||+.++++|.++ |++|++++|+.++.+++.+ ..+..... |. +.+.++|+||
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili 97 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 97 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence 345689999997 99999999999999 9999999999876554321 12232323 32 3678999999
Q ss_pred EccCCC
Q 024417 148 FCAPPS 153 (268)
Q Consensus 148 ~~a~~~ 153 (268)
|+++..
T Consensus 98 n~Ag~g 103 (191)
T d1luaa1 98 TAGAIG 103 (191)
T ss_dssp ECCCTT
T ss_pred ecCccc
Confidence 999864
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.26 E-value=2.2e-06 Score=72.39 Aligned_cols=135 Identities=15% Similarity=0.125 Sum_probs=82.4
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc-ch----hhhcCC--ceeeccCc--------------cc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HD----ELINMG--ITPSLKWT--------------EA 139 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~----~l~~~~--i~~~~~D~--------------~~ 139 (268)
...|++||||+ +-||++++++|+++ |++|++..++.++ .+ ++.+.+ +..+.+|. +.
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 81 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence 44678999997 99999999999999 9999987665433 22 233333 44455554 13
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHHHH-----------HHHHHhcCCCeEEEEccC-eeecCCCCCCCCCCCCCC
Q 024417 140 TQKFPYVIFCAPPSRSLD--------YPGDVR-----------LAALSWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~~-----------~~~~~~~gvkr~V~~SS~-~vYg~~~~~~~~E~~~~~ 199 (268)
....|++||+|+...... |.+.+. ..+.....-.+++.++|. +.+.. .
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~------------~ 149 (259)
T d1ja9a_ 82 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------I 149 (259)
T ss_dssp HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS------------C
T ss_pred cCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC------------C
Confidence 568999999999654322 111111 111111122356666553 32211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCcee
Q 024417 200 PIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLY 231 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vy 231 (268)
|. ...|+.+|...+.+.+... ...+.||.+-
T Consensus 150 ~~-~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 150 PN-HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp CS-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred CC-chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence 11 1579999988887766542 5788999874
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.22 E-value=1.4e-06 Score=73.24 Aligned_cols=136 Identities=13% Similarity=0.067 Sum_probs=82.7
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---c--CCceeeccCc--------------ccc
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N--MGITPSLKWT--------------EAT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~--~~i~~~~~D~--------------~~~ 140 (268)
..|++||||+ | -||+.++++|+++ |++|.+.+|+++..+..+ . .....+.+|. +..
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 3578999997 6 6999999999999 999998888754433221 1 1233444553 135
Q ss_pred CCCCEEEEccCCCCC----C---C-----hHHHHH-HH---H--HH-----hcCCCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS----L---D-----YPGDVR-LA---A--LS-----WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~---~-----~~~~~~-~~---~--~~-----~~gvkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...|++||+|+.... + + |...+. ++ + .+ ...-.++|++||.......
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---------- 154 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------- 154 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----------
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC----------
Confidence 689999999985321 0 1 111111 11 0 01 1112579999986643211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+.-+
T Consensus 155 --~~-~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~ 196 (256)
T d1ulua_ 155 --PK-YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTV 196 (256)
T ss_dssp --TT-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC---
T ss_pred --CC-chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeec
Confidence 11 157999999888776644 2 468899988654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.21 E-value=1.7e-05 Score=65.94 Aligned_cols=138 Identities=14% Similarity=0.043 Sum_probs=86.6
Q ss_pred CCCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc---CCceeeccCc--------------cccCC
Q 024417 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT--------------EATQK 142 (268)
Q Consensus 81 ~~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~---~~i~~~~~D~--------------~~~~~ 142 (268)
..+.|.+||||+ +-||+.++++|+++ |++|++++|+.++.+.+.+ ........|. .....
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGR 79 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccc
Confidence 345678999997 99999999999999 9999999999877654432 1222222221 13457
Q ss_pred CCEEEEccCCCCCC------C----hHHHHH---------------HHHH--H------hcCCCeEEEEccCeeecCCCC
Q 024417 143 FPYVIFCAPPSRSL------D----YPGDVR---------------LAAL--S------WNGEGSFLFTSSSAIYDCSDN 189 (268)
Q Consensus 143 ~D~Vi~~a~~~~~~------~----~~~~~~---------------~~~~--~------~~gvkr~V~~SS~~vYg~~~~ 189 (268)
.|.+++++...... + ..+... .++. . ..+..++|++||..-+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~-- 157 (248)
T d2o23a1 80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ-- 157 (248)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC--
T ss_pred ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC--
Confidence 88888876532211 0 111111 1110 0 1123479999998754321
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 190 ~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
| +...|+.+|...+.+.+.+. ...+.||.+.-+
T Consensus 158 ----------~-~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 158 ----------V-GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp ----------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred ----------C-CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecc
Confidence 1 11579999999888776542 578889988654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=98.21 E-value=5e-06 Score=69.56 Aligned_cols=136 Identities=9% Similarity=0.000 Sum_probs=84.4
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc----C-CceeeccCc--------------ccc
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-GITPSLKWT--------------EAT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~----~-~i~~~~~D~--------------~~~ 140 (268)
..|++||||+ | -||+.+++.|+++ |++|++.+|+++..+.+.+ . .......|. +..
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 81 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence 4578999996 6 6999999999999 9999999998654433211 1 222222221 135
Q ss_pred CCCCEEEEccCCCCCCC---------hHHHHHH---HH-------HH-----hcCCCeEEEEccCeeecCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD---------YPGDVRL---AA-------LS-----WNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~---------~~~~~~~---~~-------~~-----~~gvkr~V~~SS~~vYg~~~~~~~~E~~ 196 (268)
...|++||+++...... ..+.... +. .+ ...-+.+|++||......
T Consensus 82 ~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~---------- 151 (258)
T d1qsga_ 82 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA---------- 151 (258)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----------
T ss_pred cccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC----------
Confidence 67899999987643211 0111111 10 01 122346888888653111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHcC---------ceEEEeCceecC
Q 024417 197 PVVPIGRSPRTDVLLKAEKVILEFG---------GCVLRLAGLYKA 233 (268)
Q Consensus 197 ~~~p~~~~~y~~sK~~aE~~l~~~~---------~tIlRp~~vyG~ 233 (268)
.|. ...|+.+|...|.+.+... +..++||.+..+
T Consensus 152 --~~~-~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~ 194 (258)
T d1qsga_ 152 --IPN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 194 (258)
T ss_dssp --CTT-TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCT
T ss_pred --CCC-cHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccc
Confidence 111 1579999999998776542 578899999755
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=98.20 E-value=1.9e-06 Score=67.87 Aligned_cols=68 Identities=24% Similarity=0.459 Sum_probs=51.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCCce-eeccCc--cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGIT-PSLKWT--EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~i~-~~~~D~--~~~~~~D~Vi~~a~~~ 153 (268)
|++|+|+|+|.+|..+++.|.+. |+ +|++.+++++..+...+.+.. ....+. ....++|.||.+.++.
T Consensus 1 Mk~I~IIG~G~mG~sla~~L~~~--g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~ 73 (171)
T d2g5ca2 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 73 (171)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhc--CCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCch
Confidence 78899999999999999999998 64 899999987776665555532 222222 2456899999888764
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=98.19 E-value=1.3e-06 Score=68.12 Aligned_cols=68 Identities=10% Similarity=0.092 Sum_probs=51.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee-------eccCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------SLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~-------~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
|||+|+|+|.+|+.++..|.+. ||+|+.++|++++...+...+.+. ...+.+...++|+||.+.....
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~ 75 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQ 75 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccc
Confidence 6999999999999999999999 999999999887655433222111 1122346789999999887753
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=9e-06 Score=69.56 Aligned_cols=131 Identities=12% Similarity=0.048 Sum_probs=80.2
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE---eCCCCcchhhh-------cC--CceeeccCc---c---------cc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ---TMTADHHDELI-------NM--GITPSLKWT---E---------AT 140 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~---~R~~~~~~~l~-------~~--~i~~~~~D~---~---------~~ 140 (268)
-|||||+ +-||+.++++|.++ |.+|+.+ .|+.+....+. .. .+..+.+|. + .-
T Consensus 4 VvlITGassGIG~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred EEEEccCCCHHHHHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 3578897 99999999999999 9875544 44443332221 12 244455564 1 12
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhcCCCeEEEEccCeeecCCCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~~~--~~~~gvkr~V~~SS~~vYg~~~~~~~~E~~~~~ 199 (268)
...|+++++++...... |.+.+ +.++ +.+.+-.++|++||..-+-..
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~------------ 149 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL------------ 149 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC------------
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC------------
Confidence 57999999998654321 11111 1111 234566799999997532211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCcee
Q 024417 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (268)
Q Consensus 200 p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vy 231 (268)
|. ...|+.+|...+.+.+.. + +..+.||.+-
T Consensus 150 ~~-~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 150 PF-NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 11 157999998877665433 3 5888999885
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.17 E-value=7.2e-06 Score=63.48 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=51.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCC--CeEEEEeCCCCcchh----hh-----cCCceeeccCccccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LI-----NMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G--~~V~~~~R~~~~~~~----l~-----~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
.+||.|+|+|++|..++..|+.+ | .||..+|+++++.+. +. .........|.+.+.++|+||.+++.
T Consensus 5 ~~KI~IIGaG~VG~~~A~~l~~~--~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvitag~ 82 (146)
T d1ez4a1 5 HQKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGA 82 (146)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEEeccc
Confidence 46999999999999999999998 6 599999998654321 11 11233344677889999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 83 ~~ 84 (146)
T d1ez4a1 83 PQ 84 (146)
T ss_dssp --
T ss_pred cc
Confidence 43
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.16 E-value=8.8e-07 Score=69.70 Aligned_cols=68 Identities=21% Similarity=0.258 Sum_probs=56.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|+||-|+|.|.+|+.+++.|++. ||+|++.+|++++.+.+...+........+.+..+|+|+.|....
T Consensus 1 M~kIg~IGlG~MG~~iA~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~ 68 (162)
T d3cuma2 1 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPAS 68 (162)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCH
T ss_pred CCEEEEEEEHHHHHHHHHHHHHC--CCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccch
Confidence 78999999999999999999999 999999999988777766665543322236789999999988764
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.10 E-value=7.1e-07 Score=70.16 Aligned_cols=66 Identities=12% Similarity=0.249 Sum_probs=55.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
|||-|+|.|.+|+.+++.|++. |++|++.+|++++.+.+...+......-.+..+++|+||.|.+.
T Consensus 1 MkIgiIGlG~MG~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~ 66 (161)
T d1vpda2 1 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPN 66 (161)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CEEEEEehhHHHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCC
Confidence 5899999999999999999999 99999999998888777766665432222578899999998865
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.10 E-value=3.9e-06 Score=68.27 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=50.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee-------------------ccCc-cccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-------------------LKWT-EATQKFP 144 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~-------------------~~D~-~~~~~~D 144 (268)
|||.|+|+|++|..++..|.+. |++|+++|.++++.+.+........ ..|. ++++++|
T Consensus 1 MkI~ViGlG~vGl~~a~~la~~--g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d 78 (202)
T d1mv8a2 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (202)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHhHHHHHHHHHhC--CCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence 6899999999999999999999 9999999998776665543221111 0121 3577999
Q ss_pred EEEEccCCC
Q 024417 145 YVIFCAPPS 153 (268)
Q Consensus 145 ~Vi~~a~~~ 153 (268)
+++.|.+..
T Consensus 79 ~i~i~VpTP 87 (202)
T d1mv8a2 79 VSFICVGTP 87 (202)
T ss_dssp EEEECCCCC
T ss_pred EEEEecCcc
Confidence 999999753
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=98.07 E-value=1.9e-06 Score=67.00 Aligned_cols=65 Identities=20% Similarity=0.319 Sum_probs=53.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhc-CCceeeccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~-~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
|||.++|+|.+|.++++.|++. | ++|++.+|++++.+.+.+ .+++.. .|.+.+.++|+||.+..|
T Consensus 1 MkI~fIG~G~MG~ai~~~l~~~--~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~~v~~~Div~lavkP 67 (152)
T d1yqga2 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELGVETS-ATLPELHSDDVLILAVKP 67 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTCCEEE-SSCCCCCTTSEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCCcEEEEeCChhHHHHhhhhcccccc-cccccccccceEEEecCH
Confidence 5899999999999999999888 6 899999999888777655 366544 344567889999988765
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=98.07 E-value=9.9e-06 Score=68.28 Aligned_cols=136 Identities=9% Similarity=-0.046 Sum_probs=81.6
Q ss_pred CCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh---hcC--CceeeccCc--------------ccc
Q 024417 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---INM--GITPSLKWT--------------EAT 140 (268)
Q Consensus 83 ~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l---~~~--~i~~~~~D~--------------~~~ 140 (268)
..|++||||+ | -||+.++++|+++ |++|++.+|+++..+.+ ... .......|. +..
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 4578999996 7 6999999999999 99999999986533322 222 222233332 146
Q ss_pred CCCCEEEEccCCCCC----CC----hHHHHHH-----------HH--H-HhcC-CCeEEEEccCeeecCCCCCCCCCCCC
Q 024417 141 QKFPYVIFCAPPSRS----LD----YPGDVRL-----------AA--L-SWNG-EGSFLFTSSSAIYDCSDNGACDEDSP 197 (268)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~~----~~~~~~~-----------~~--~-~~~g-vkr~V~~SS~~vYg~~~~~~~~E~~~ 197 (268)
...|++|++++.... ++ +...... .. . ...+ ...++..|+.+.....
T Consensus 82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~---------- 151 (274)
T d2pd4a1 82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---------- 151 (274)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC----------
T ss_pred CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc----------
Confidence 789999999986432 11 1111110 00 0 1112 2345555554433211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--ceEEEeCceecC
Q 024417 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYKA 233 (268)
Q Consensus 198 ~~p~~~~~y~~sK~~aE~~l~~~-------~--~tIlRp~~vyG~ 233 (268)
.. ...|+.+|...+.+.+.. + ...+.||.+.-+
T Consensus 152 -~~--~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~ 193 (274)
T d2pd4a1 152 -AH--YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTL 193 (274)
T ss_dssp -TT--CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred -cc--chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCc
Confidence 11 157899998888776653 2 578889988754
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=98.04 E-value=7e-06 Score=64.75 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=51.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee--------------ccCc-cccCCCCEEEEc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--------------LKWT-EATQKFPYVIFC 149 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~--------------~~D~-~~~~~~D~Vi~~ 149 (268)
|||.|+|+|.+|..++..|.+. ||+|.+++|++++.+.+...+.... ..|. +.++++|+||.+
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 6899999999999999999999 9999999998776665543332111 1122 468999999998
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
....
T Consensus 80 v~~~ 83 (184)
T d1bg6a2 80 VPAI 83 (184)
T ss_dssp SCGG
T ss_pred Echh
Confidence 7654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.00 E-value=3.3e-06 Score=66.06 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=50.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-Cceeec-cC--c-----cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSL-KW--T-----EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-~i~~~~-~D--~-----~~~~~~D~Vi~~a~~ 152 (268)
.++|+|+|+|.+|+++++.|.++ ||+|++++|+.++...+... +..... .+ . +.+...|.++.+.+.
T Consensus 2 ~K~IliiGaG~~G~~~a~~L~~~--g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~ 77 (182)
T d1e5qa1 2 TKSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 77 (182)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccc
Confidence 37899999999999999999999 99999999998887766442 222221 11 1 256788888876644
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=98.00 E-value=5.1e-06 Score=64.38 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=51.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||-|+|+|.+|+.+++.|+++ |++|++.++.+.+.......++.....-.+.++++|+||.|.++.
T Consensus 1 MkIgiIG~G~mG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~ 67 (152)
T d1i36a2 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPG 67 (152)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGG
T ss_pred CEEEEEcHHHHHHHHHHHHHHC--CCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCc
Confidence 5899999999999999999999 999999988776654443333333222225788999999998764
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.98 E-value=1.2e-05 Score=67.55 Aligned_cols=134 Identities=10% Similarity=-0.077 Sum_probs=81.9
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHh---cCCCCeEEEEeCCCCcchhhhc------CC--ceeeccCc---c-------c--
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN------MG--ITPSLKWT---E-------A-- 139 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~---~~~G~~V~~~~R~~~~~~~l~~------~~--i~~~~~D~---~-------~-- 139 (268)
.|.++|||+ +-||+.++++|.+ + |++|++.+|++++.+++.+ .+ +..+.+|. + .
T Consensus 6 gKvalITGas~GIG~aiA~~lA~~~~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 6 CAVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHhcccC--CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 456788897 9999999999975 6 9999999998776554321 12 34455664 1 0
Q ss_pred ------cCCCCEEEEccCCCCC---C---C-----hHHHHH-H----------HHH--HhcC--CCeEEEEccCeeecCC
Q 024417 140 ------TQKFPYVIFCAPPSRS---L---D-----YPGDVR-L----------AAL--SWNG--EGSFLFTSSSAIYDCS 187 (268)
Q Consensus 140 ------~~~~D~Vi~~a~~~~~---~---~-----~~~~~~-~----------~~~--~~~g--vkr~V~~SS~~vYg~~ 187 (268)
....|+++++|+.... . + |.+.+. | ++. ++.+ ..++|++||..-+...
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~ 163 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC
Confidence 1246688998875321 1 1 211111 1 110 1222 3579999987542211
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHc-----C--ceEEEeCceec
Q 024417 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYK 232 (268)
Q Consensus 188 ~~~~~~E~~~~~p~~~~~y~~sK~~aE~~l~~~-----~--~tIlRp~~vyG 232 (268)
| +...|+.+|...+.+.+.+ + ...+.||.+-.
T Consensus 164 ------------~-~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T 202 (259)
T d1oaaa_ 164 ------------K-GWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp ------------T-TCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred ------------c-cchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCC
Confidence 1 1257999998887666544 2 57778888764
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.97 E-value=1.4e-05 Score=62.72 Aligned_cols=95 Identities=19% Similarity=0.227 Sum_probs=63.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhc-CCceeeccCc--cccCCCCEEEEccCCCCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPSLKWT--EATQKFPYVIFCAPPSRSLD 157 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~-~~i~~~~~D~--~~~~~~D~Vi~~a~~~~~~~ 157 (268)
...++|||+|+|-+|+.+++.|... |. +|++..|+.++...+.. .+.+....+. +.+.++|+||.|.+....--
T Consensus 22 l~~~~ilviGaG~~g~~v~~~L~~~--g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~~ii 99 (159)
T d1gpja2 22 LHDKTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPHPVI 99 (159)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSSCCB
T ss_pred cccCeEEEECCCHHHHHHHHHHHhc--CCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCCccc
Confidence 3468999999999999999999999 87 69999998777655533 3555443332 46789999999987543211
Q ss_pred hHHHHHHHHHHhcCCCeEEEE
Q 024417 158 YPGDVRLAALSWNGEGSFLFT 178 (268)
Q Consensus 158 ~~~~~~~~~~~~~gvkr~V~~ 178 (268)
-.+.++..+..+...+.++++
T Consensus 100 ~~~~i~~~~~~r~~~~~~~ii 120 (159)
T d1gpja2 100 HVDDVREALRKRDRRSPILII 120 (159)
T ss_dssp CHHHHHHHHHHCSSCCCEEEE
T ss_pred cHhhhHHHHHhcccCCCeEEE
Confidence 134455554333333433333
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.94 E-value=2.2e-06 Score=66.71 Aligned_cols=67 Identities=12% Similarity=0.249 Sum_probs=53.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|+.+++.|++. |++|++.+|+.++.+++.+ .++....-..+..+++|+||.+..|.
T Consensus 1 MkIg~IG~G~mG~al~~~l~~~--~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavkp~ 68 (152)
T d2ahra2 1 MKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQ 68 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGG
T ss_pred CEEEEEeccHHHHHHHHHHHhC--CCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecchH
Confidence 5899999999999999999999 9999999998877766643 36554432225788999999988764
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.90 E-value=3e-05 Score=64.80 Aligned_cols=70 Identities=11% Similarity=0.045 Sum_probs=49.1
Q ss_pred CCCCeEEEEcc-cH--HHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhhc-C--CceeeccCc----------c------
Q 024417 82 VGENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-M--GITPSLKWT----------E------ 138 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~--IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~~-~--~i~~~~~D~----------~------ 138 (268)
+..|++||||+ |- ||+.++++|.++ |++|+...|+.++. +.+.+ . ....+.+|. +
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~ 81 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI 81 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence 34578999996 64 999999999999 99999999986653 22222 1 233344442 0
Q ss_pred -ccCCCCEEEEccCCC
Q 024417 139 -ATQKFPYVIFCAPPS 153 (268)
Q Consensus 139 -~~~~~D~Vi~~a~~~ 153 (268)
.....|+++|+++..
T Consensus 82 ~~~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 82 GAGNKLDGVVHSIGFM 97 (268)
T ss_dssp CTTCCEEEEEECCCCC
T ss_pred ccCCCcceeeeccccc
Confidence 135679999999854
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.86 E-value=2.7e-05 Score=63.90 Aligned_cols=36 Identities=19% Similarity=0.307 Sum_probs=32.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
|++||||+ +-||+.++++|+++ |++|++.+|+++..
T Consensus 2 K~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~ 38 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLRREGE 38 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCCSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcccc
Confidence 67899997 99999999999999 99999999987654
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.85 E-value=3e-06 Score=68.45 Aligned_cols=71 Identities=13% Similarity=0.122 Sum_probs=53.1
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCC--------cee-----eccCc-cccCCCCEE
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG--------ITP-----SLKWT-EATQKFPYV 146 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~--------i~~-----~~~D~-~~~~~~D~V 146 (268)
.+.|+||.|+|+|..|..++..|.+. ||+|+..+|+++..+.+...+ ++. ...|. +++.++|+|
T Consensus 4 ~~~m~KI~ViGaG~wGtAlA~~La~~--g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~i 81 (189)
T d1n1ea2 4 LLYLNKAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEII 81 (189)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCE
T ss_pred cceeceEEEECCCHHHHHHHHHHHHc--CCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEE
Confidence 45678999999999999999999999 999999999877665543222 111 11233 468899999
Q ss_pred EEccCCC
Q 024417 147 IFCAPPS 153 (268)
Q Consensus 147 i~~a~~~ 153 (268)
|.+.+..
T Consensus 82 iiavPs~ 88 (189)
T d1n1ea2 82 LFVIPTQ 88 (189)
T ss_dssp EECSCHH
T ss_pred EEcCcHH
Confidence 9877654
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.84 E-value=8.3e-05 Score=57.34 Aligned_cols=69 Identities=12% Similarity=0.136 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hh------cCCceeeccCccccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LI------NMGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~------~~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
.+||.|+|+|.+|..++..|..+ +. |+..+|+++++... +. ...+.....|.+.+.++|+||.+++
T Consensus 6 ~~KI~IiGaG~vG~~~a~~l~~~--~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag 83 (148)
T d1ldna1 6 GARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAG 83 (148)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCS
T ss_pred CCeEEEECcCHHHHHHHHHHHhc--CCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEecc
Confidence 46899999999999999999998 65 89999987654221 11 1223334467789999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 84 ~~~ 86 (148)
T d1ldna1 84 ANQ 86 (148)
T ss_dssp CCC
T ss_pred ccc
Confidence 644
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.81 E-value=1.4e-05 Score=66.49 Aligned_cols=71 Identities=15% Similarity=0.216 Sum_probs=48.2
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc-hhhhc-CCceeeccC--ccccCCCCEEEEccCCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-MGITPSLKW--TEATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~-~~l~~-~~i~~~~~D--~~~~~~~D~Vi~~a~~~~~~ 156 (268)
||.|||||+ +-||+.++++|+++ |++|++++|+.++. ..+.. .+.+....+ .+.....|+++++|+.....
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~ 76 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT 76 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcH
Confidence 678899996 99999999999999 99999999975432 11111 011111111 12345799999999865543
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.78 E-value=4.1e-05 Score=58.87 Aligned_cols=40 Identities=30% Similarity=0.280 Sum_probs=35.3
Q ss_pred CCCeEEEEc-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh
Q 024417 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE 124 (268)
Q Consensus 83 ~m~kVLI~G-aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~ 124 (268)
.|+||.|+| .|.+|+.+++.|++. ||+|++.+|+......
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~~~~~~ 48 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAVAE 48 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGGHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEecccccccccc
Confidence 478999999 799999999999999 9999999998765443
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.76 E-value=2.1e-05 Score=62.23 Aligned_cols=68 Identities=13% Similarity=0.206 Sum_probs=53.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee----cc---Cc-cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS----LK---WT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~----~~---D~-~~~~~~D~Vi~~a~~~ 153 (268)
+.+|-|+|.|.+|..+++.|++. ||+|++.+|++++.+.+...+.... .. +. +.+..+|.++.+....
T Consensus 2 ~~nIg~IGlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 2 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CCcEEEEeEhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCch
Confidence 45799999999999999999999 9999999999988877755433211 11 11 4678999999887664
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.74 E-value=0.00015 Score=55.54 Aligned_cols=68 Identities=16% Similarity=-0.003 Sum_probs=49.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc----CC--ceee-ccCccccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----MG--ITPS-LKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~----~~--i~~~-~~D~~~~~~~D~Vi~~a~ 151 (268)
|||.|+|+|.+|..++..|..+ +. |+..+++++++... +.. .. .... ..|.+.+.++|+||.+++
T Consensus 1 MKI~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag 78 (142)
T d1ojua1 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEecc
Confidence 6899999999999999999988 64 89999987655321 111 11 1222 246789999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 79 ~~~ 81 (142)
T d1ojua1 79 LAR 81 (142)
T ss_dssp CCC
T ss_pred ccC
Confidence 544
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.72 E-value=0.00014 Score=55.40 Aligned_cols=71 Identities=15% Similarity=0.016 Sum_probs=50.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hh-----cCCceeeccCccccCCCCEEEEccCCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LI-----NMGITPSLKWTEATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~-----~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~ 155 (268)
|||.|+|+|.+|..++..|+.+.-..|+..+|+++++... +. .........|.+.++++|+||.+++....
T Consensus 1 mKI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~~~ 80 (140)
T d1a5za1 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVPQK 80 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEecccccC
Confidence 5899999999999999999887222489999987654321 11 01223334566789999999999986543
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.72 E-value=0.00017 Score=55.16 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=47.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc-----CCceeeccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-----MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+||.|+|+|.+|..++-.|+.+ +. |+..+++++++.+. +.. .......+|.+.+.++|+|+.+|+..
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~--~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~ 79 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 79 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccc
Confidence 5899999999999999999988 54 89999988765321 211 01222335667899999999999865
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 80 ~ 80 (142)
T d1y6ja1 80 R 80 (142)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.72 E-value=3.2e-05 Score=65.39 Aligned_cols=69 Identities=7% Similarity=-0.077 Sum_probs=50.6
Q ss_pred CeE-EEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcC--CceeeccCc---c-----------ccCC
Q 024417 85 NDL-LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM--GITPSLKWT---E-----------ATQK 142 (268)
Q Consensus 85 ~kV-LI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~--~i~~~~~D~---~-----------~~~~ 142 (268)
|+| ||||+ +-||+.++++|.++ .|+.|+..+|+.++.+. +... .+..+.+|. + ....
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~-~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRL-FSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHH-SSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CeEEEECCCCCHHHHHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 455 78997 99999999999874 17899999999776543 3333 355566664 1 2468
Q ss_pred CCEEEEccCCCC
Q 024417 143 FPYVIFCAPPSR 154 (268)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (268)
.|++||+|+...
T Consensus 82 iDiLVnNAGi~~ 93 (275)
T d1wmaa1 82 LDVLVNNAGIAF 93 (275)
T ss_dssp EEEEEECCCCCC
T ss_pred cEEEEEcCCcCC
Confidence 999999998643
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.65 E-value=0.00017 Score=51.43 Aligned_cols=72 Identities=19% Similarity=0.213 Sum_probs=56.1
Q ss_pred CCCCCeEEEEcccHHH-HHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLG-RLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG-~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
..++++|.++|-|-+| +.||+.|+++ |++|.+-|+.... .+.+.+.|++...+.. +.+.+.|.||...+...
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~--G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKD 79 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTSCT
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCCcCC
Confidence 3456899999987777 6689999999 9999999997543 4566778888776543 56789999998877543
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.64 E-value=0.00042 Score=52.84 Aligned_cols=68 Identities=13% Similarity=0.176 Sum_probs=49.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hh------cCCceee-ccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LI------NMGITPS-LKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~------~~~i~~~-~~D~~~~~~~D~Vi~~a~~ 152 (268)
+||.|+|+|.+|..++-.|..+ +. ++..++.++++... +. ....... ..|.+.+.++|+||.+|+.
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~--~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~ 79 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGA 79 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeec
Confidence 5899999999999999999887 64 89999987765321 11 1122222 2466789999999999985
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 80 ~~ 81 (142)
T d1uxja1 80 PR 81 (142)
T ss_dssp C-
T ss_pred cC
Confidence 43
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.62 E-value=0.00037 Score=54.31 Aligned_cols=70 Identities=17% Similarity=0.104 Sum_probs=51.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc----CC--ceeeccCccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----MG--ITPSLKWTEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~----~~--i~~~~~D~~~~~~~D~Vi~~a 150 (268)
..+||.|+|+|.+|..++..|..+ |. |+..+|+++++... +.. .+ ......|.+.+.++|+||.+|
T Consensus 19 ~~~KV~IIGaG~VG~~~A~~l~~~--~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitA 96 (160)
T d1i0za1 19 PNNKITVVGVGQVGMACAISILGK--SLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTA 96 (160)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc--CCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEec
Confidence 356999999999999999999998 76 89999987654321 211 11 112235667899999999999
Q ss_pred CCCC
Q 024417 151 PPSR 154 (268)
Q Consensus 151 ~~~~ 154 (268)
+...
T Consensus 97 g~~~ 100 (160)
T d1i0za1 97 GVRQ 100 (160)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 8654
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.61 E-value=0.0006 Score=51.78 Aligned_cols=70 Identities=13% Similarity=0.094 Sum_probs=50.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc------CCceee-ccCccccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN------MGITPS-LKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~------~~i~~~-~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|||.|+|+|.+|..++..|.......++..+|+++++.... .. ...+.. ..|.+.+.++|+|+.+++..
T Consensus 1 mKI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag~~ 80 (142)
T d1guza1 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEecC
Confidence 58999999999999999999882125999999987654321 11 112222 24557899999999999854
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 81 ~ 81 (142)
T d1guza1 81 R 81 (142)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=4.6e-05 Score=58.83 Aligned_cols=70 Identities=11% Similarity=0.055 Sum_probs=44.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcC--CCCeEEEEeCCCCcchhhhc--CCcee-eccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEH--PGCQIYGQTMTADHHDELIN--MGITP-SLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~--~G~~V~~~~R~~~~~~~l~~--~~i~~-~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|+||.|+|+ |++|+.+++.|++++ |-.+++.+.++......+.. ..... ...|.+.+.++|++|.+++..
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGGD 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCHH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecCch
Confidence 789999997 999999999887752 34577777665333222111 11111 112334678999999988643
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.59 E-value=0.00031 Score=53.82 Aligned_cols=68 Identities=13% Similarity=0.099 Sum_probs=48.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC--CeEEEEeCCCCc--ch----hhhc------CCceeec---cCccccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADH--HD----ELIN------MGITPSL---KWTEATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G--~~V~~~~R~~~~--~~----~l~~------~~i~~~~---~D~~~~~~~D~V 146 (268)
|||.|+|+ |.+|..++..|+.+ + .++..++++++. .+ .+.. ..++... .|.+.++++|+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~--~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEE
Confidence 58999996 99999999999998 7 489999987532 11 1111 1222222 255789999999
Q ss_pred EEccCCCC
Q 024417 147 IFCAPPSR 154 (268)
Q Consensus 147 i~~a~~~~ 154 (268)
|.+|+...
T Consensus 79 VitAG~~~ 86 (145)
T d1hyea1 79 IITSGVPR 86 (145)
T ss_dssp EECCSCCC
T ss_pred EEeccccc
Confidence 99998644
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.57 E-value=7.1e-05 Score=57.67 Aligned_cols=66 Identities=15% Similarity=0.041 Sum_probs=49.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc------CCceeeccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~------~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
+||.|+|+|.+|..++..|+.+ |. ++..+++++++.+. +.. ........|.+.++++|+||.+|+.
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~ 79 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGN 79 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECcCHHHHHHHHHHHhc--CCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEeccc
Confidence 6899999999999999999988 64 89999987654321 111 1223334567889999999999984
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=0.00012 Score=58.88 Aligned_cols=38 Identities=18% Similarity=0.256 Sum_probs=34.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~ 121 (268)
++.+||.|+|+|.+|+.++..++.. |++|+..+++++.
T Consensus 2 ~~IkkvaViGaG~mG~~iA~~~a~~--G~~V~l~D~~~~~ 39 (192)
T d1f0ya2 2 IIVKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDI 39 (192)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHH
T ss_pred ceeEEEEEECcCHHHHHHHHHHHhC--CCcEEEEECChHH
Confidence 3457999999999999999999999 9999999998754
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.56 E-value=2.2e-05 Score=61.42 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=34.2
Q ss_pred CeEEEE-cccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh
Q 024417 85 NDLLIV-GPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL 125 (268)
Q Consensus 85 ~kVLI~-GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l 125 (268)
|||.|+ |+|.+|+.|++.|.+. ||+|++.+|++++.+.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAK 40 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence 578888 6799999999999999 99999999998766544
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.56 E-value=6.9e-05 Score=60.00 Aligned_cols=65 Identities=17% Similarity=0.238 Sum_probs=45.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec------------------cC-ccccCCCCE
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------------KW-TEATQKFPY 145 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~------------------~D-~~~~~~~D~ 145 (268)
|||.|+|.|++|..++..| ++ |++|+++|-++++.+.+.. +..++. .+ .....++|+
T Consensus 1 MkI~ViGlG~vGl~~a~~~-a~--g~~V~g~Din~~~v~~l~~-g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~i 76 (196)
T d1dlja2 1 MKIAVAGSGYVGLSLGVLL-SL--QNEVTIVDILPSKVDKINN-GLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAEL 76 (196)
T ss_dssp CEEEEECCSHHHHHHHHHH-TT--TSEEEEECSCHHHHHHHHT-TCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCChhHHHHHHHH-HC--CCcEEEEECCHHHHHHHhh-cccccchhhHHHHhhhhhhhhhccchhhhhhhcccc
Confidence 6899999999999998755 67 9999999998776665542 221111 01 123568999
Q ss_pred EEEccCCC
Q 024417 146 VIFCAPPS 153 (268)
Q Consensus 146 Vi~~a~~~ 153 (268)
++.+.+..
T Consensus 77 i~v~vpt~ 84 (196)
T d1dlja2 77 VIIATPTN 84 (196)
T ss_dssp EEECCCCC
T ss_pred ccccCCcc
Confidence 88887653
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.56 E-value=0.00056 Score=56.50 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=30.9
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCc
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~ 121 (268)
..||||+ +-||+.++++|+++ |++|+..+|+.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchH
Confidence 5689997 89999999999999 9999999998654
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.51 E-value=0.00045 Score=52.78 Aligned_cols=69 Identities=17% Similarity=0.280 Sum_probs=50.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchh----hhc----CC-ceee-ccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----MG-ITPS-LKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~----l~~----~~-i~~~-~~D~~~~~~~D~Vi~~a~~ 152 (268)
.||.|+|+|.+|..++..|..+ +. |+..+++++++.+. +.. .+ .... ..|.+.+.++|+||.+++.
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~--~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~ 79 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 79 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEeccc
Confidence 4899999999999999999988 65 89999988654321 211 11 1222 2355789999999999997
Q ss_pred CCC
Q 024417 153 SRS 155 (268)
Q Consensus 153 ~~~ 155 (268)
...
T Consensus 80 ~~~ 82 (143)
T d1llda1 80 RQK 82 (143)
T ss_dssp CCC
T ss_pred ccC
Confidence 543
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.51 E-value=0.00034 Score=54.47 Aligned_cols=71 Identities=17% Similarity=0.116 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEeCCCCcch----hhhc----CC--ceeeccCccccCCCCEEEE
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD----ELIN----MG--ITPSLKWTEATQKFPYVIF 148 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~----~l~~----~~--i~~~~~D~~~~~~~D~Vi~ 148 (268)
.+.+.||.|+|+|.+|..++..|..+ |. |+..+++++++.. .+.. .+ ......|.+.+.++|+||.
T Consensus 16 ~~~~~KI~IIGaG~VG~~~A~~l~~~--~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvi 93 (159)
T d2ldxa1 16 KLSRCKITVVGVGDVGMACAISILLK--GLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVII 93 (159)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHTT--TSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEE
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEE
Confidence 34456899999999999999999988 65 8999998765432 1221 11 1122346678899999999
Q ss_pred ccCCC
Q 024417 149 CAPPS 153 (268)
Q Consensus 149 ~a~~~ 153 (268)
+|+..
T Consensus 94 tag~~ 98 (159)
T d2ldxa1 94 TAGAR 98 (159)
T ss_dssp CCSCC
T ss_pred ecccc
Confidence 99854
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.49 E-value=0.00065 Score=52.44 Aligned_cols=70 Identities=10% Similarity=0.042 Sum_probs=49.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhh----hc----CCcee--e-ccCc-cccCCCCEEEE
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN----MGITP--S-LKWT-EATQKFPYVIF 148 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l----~~----~~i~~--~-~~D~-~~~~~~D~Vi~ 148 (268)
.+++||.|+|+|.+|..++..|... +. ++..++.++++.+.. .. .+... . ..+. +++.++|+|+.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~--~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvi 82 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIV 82 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC--CCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEE
Confidence 3467999999999999999988887 65 899999887654321 11 11111 1 1222 46899999999
Q ss_pred ccCCC
Q 024417 149 CAPPS 153 (268)
Q Consensus 149 ~a~~~ 153 (268)
+++..
T Consensus 83 tag~~ 87 (154)
T d1pzga1 83 TAGLT 87 (154)
T ss_dssp CCSCS
T ss_pred ecccc
Confidence 99753
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=97.47 E-value=0.00033 Score=49.18 Aligned_cols=68 Identities=21% Similarity=0.211 Sum_probs=53.9
Q ss_pred CeEEEEcccHHHH-HHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeecc-CccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGR-LVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLK-WTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~-~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~-D~~~~~~~D~Vi~~a~~~~ 154 (268)
|||-++|-|-+|- .||+.|+++ |++|.+-|+.+.. .+.|+..|++...+ |.+.+.++|.||...+...
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~--G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsAI~~ 72 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSN--GNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRD 72 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTTCCT
T ss_pred cEEEEEeECHHHHHHHHHHHHhC--CCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecCcCC
Confidence 5899999766665 589999999 9999999997543 45688889887665 4467889999998877654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00019 Score=54.97 Aligned_cols=67 Identities=7% Similarity=0.087 Sum_probs=53.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc----hhhhcCCceeeccCc---c-----ccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~----~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~ 151 (268)
+.+|+|+|.|-+|..+++.|.++ |++|++++.++++. +.+...++.++.+|. + -+.++|.||-+..
T Consensus 3 knHiII~G~g~~g~~l~~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 3 KDHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 45799999999999999999999 99999999887542 233445788888875 1 4678999997764
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 81 ~ 81 (153)
T d1id1a_ 81 N 81 (153)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.40 E-value=0.00031 Score=53.80 Aligned_cols=67 Identities=10% Similarity=0.073 Sum_probs=46.1
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCC--eEEEEeCCCCcchhhhcCC------ceeec-c-C-ccccCCCCEEEEccCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMG------ITPSL-K-W-TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~--~V~~~~R~~~~~~~l~~~~------i~~~~-~-D-~~~~~~~D~Vi~~a~~~ 153 (268)
||.|+|+ |.+|+.++..|..+ +. ++..++.++.+...+.-.. ..... . | .+.++++|+||.+++..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~--~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhC--CccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence 8999996 99999999999888 65 7888888654322211111 11111 1 2 35789999999999854
Q ss_pred C
Q 024417 154 R 154 (268)
Q Consensus 154 ~ 154 (268)
.
T Consensus 80 ~ 80 (144)
T d1mlda1 80 R 80 (144)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.38 E-value=0.00028 Score=49.68 Aligned_cols=68 Identities=12% Similarity=0.100 Sum_probs=49.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcCCceeeccC--ccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGITPSLKW--TEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~~i~~~~~D--~~~~~~~D~Vi~~a~~~ 153 (268)
..++|+|+|.|-.|..+++.|.++ |++|++.+.+... .+.+ ..++...... .+.+.++|.||..-+..
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKL-PEAVERHTGSLNDEWLMAADLIVASPGIA 75 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGS-CTTSCEEESBCCHHHHHHCSEEEECTTSC
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHH-hhccceeecccchhhhccCCEEEECCCCC
Confidence 457899999999999999999999 9999999986542 2222 2344444332 34567899999866643
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.35 E-value=0.0005 Score=53.28 Aligned_cols=87 Identities=11% Similarity=0.146 Sum_probs=60.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee-ccCc-----c---------ccCCCCEEEEc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKWT-----E---------ATQKFPYVIFC 149 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~-~~D~-----~---------~~~~~D~Vi~~ 149 (268)
.+|+|+|+|.+|...++.++.. |.+|+++++++++.+..++.+.... ..+. + .-.++|+||.+
T Consensus 28 ~~vlV~G~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~ 105 (170)
T d1e3ja2 28 TTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 105 (170)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CEEEEEcccccchhhHhhHhhh--cccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeec
Confidence 4899999999999999999888 9999999999888777666665432 2211 0 13579999999
Q ss_pred cCCCCCCChHHHHHHHHHHhcCCCeEEEEc
Q 024417 150 APPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (268)
Q Consensus 150 a~~~~~~~~~~~~~~~~~~~~gvkr~V~~S 179 (268)
++.. ..+...+.....-.+++.++
T Consensus 106 ~g~~------~~~~~a~~~~~~~G~iv~~G 129 (170)
T d1e3ja2 106 SGNE------KCITIGINITRTGGTLMLVG 129 (170)
T ss_dssp SCCH------HHHHHHHHHSCTTCEEEECS
T ss_pred CCCh------HHHHHHHHHHhcCCceEEEe
Confidence 8753 22333332222335777766
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.35 E-value=0.00016 Score=56.38 Aligned_cols=69 Identities=17% Similarity=0.299 Sum_probs=54.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--c-Cc----cccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--K-WT----EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~-D~----~~~~~~D~Vi~~a~~~~ 154 (268)
..+|+|+|+|.+|...++.++.. |.+|+++++++++.+..++.|.+.+. . +. ....++|+|+.+.+...
T Consensus 28 g~~vlI~GaG~vG~~a~q~ak~~--G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~~ 103 (168)
T d1piwa2 28 GKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLT 103 (168)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCST
T ss_pred CCEEEEECCCCcchhHHHHhhhc--cccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCCc
Confidence 35899999999999999988888 99999999999988877777765432 1 11 14568999999877543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.33 E-value=0.0013 Score=54.85 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=30.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
|+-+||||+ +-||+.++++|.++ |++|++.+|+.
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~ 36 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRS 36 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCC
Confidence 567789997 99999999999999 99999887764
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.31 E-value=0.00027 Score=54.13 Aligned_cols=69 Identities=10% Similarity=0.078 Sum_probs=44.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCCCcchhhhcCCceeecc--CccccCCCCEEEEccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSLK--WTEATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~R~~~~~~~l~~~~i~~~~~--D~~~~~~~D~Vi~~a~~ 152 (268)
.++|.|+|+ |++|+.|++.|.++ +|..++..+..+...-+.+...+-+.... +.+...++|+++.+++.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~ 74 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAA 74 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCCc
Confidence 368999997 99999999999753 56778887765433222222112122222 22457789999988754
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.30 E-value=0.001 Score=55.84 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=30.9
Q ss_pred CCCCeEEEEcc-c--HHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 82 VGENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 82 ~~m~kVLI~Ga-G--~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
+..|++||||+ | -||+.++++|+++ |++|++..|+
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~ 43 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWV 43 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCc
Confidence 44688999997 5 6999999999999 9999998875
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.26 E-value=0.00017 Score=57.50 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=33.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
.+||.|+|+|.+|+.++..++.. |++|+..+++++..
T Consensus 4 I~~vaViGaG~mG~~iA~~~a~~--G~~V~l~D~~~~~l 40 (186)
T d1wdka3 4 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGI 40 (186)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHH
Confidence 57899999999999999999999 99999999987643
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.25 E-value=0.00038 Score=55.01 Aligned_cols=67 Identities=10% Similarity=0.052 Sum_probs=47.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc--chhhhcCCc-----------eee-ccCc-cccCCCCEEEEc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGI-----------TPS-LKWT-EATQKFPYVIFC 149 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~--~~~l~~~~i-----------~~~-~~D~-~~~~~~D~Vi~~ 149 (268)
|||.|+|+|..|..++..|.+. |++|+...|..+. .+.+...+. ... ..|. +++.++|+||.+
T Consensus 1 MkI~ViGaG~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a 78 (180)
T d1txga2 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (180)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence 6899999999999999999999 9999999885332 222322111 011 1122 478999999998
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
.+..
T Consensus 79 vps~ 82 (180)
T d1txga2 79 VSTD 82 (180)
T ss_dssp SCGG
T ss_pred cchh
Confidence 8764
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.17 E-value=0.00032 Score=54.85 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-----CceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-----~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
.++|||+|+|-.++.++..|.+. |.+|+++.|+.++.+.+... .++....+......+|.||+|.+..
T Consensus 18 ~k~vlIlGaGGaarai~~al~~~--g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 18 GLRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 90 (170)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECCcHHHHHHHHHhccc--ceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeecccccC
Confidence 47899999999999999999999 99999999998776554321 1222222222456899999997654
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.16 E-value=0.00033 Score=53.83 Aligned_cols=93 Identities=16% Similarity=0.080 Sum_probs=52.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc--CCCCeEEEEeCCCCc--chhhhcC-CceeeccCccccCCCCEEEEccCCCCCCCh
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQE--HPGCQIYGQTMTADH--HDELINM-GITPSLKWTEATQKFPYVIFCAPPSRSLDY 158 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~--~~G~~V~~~~R~~~~--~~~l~~~-~i~~~~~D~~~~~~~D~Vi~~a~~~~~~~~ 158 (268)
|||.|+|+ |++|+.|++.|+++ +|..++..+..+... ...+... .......|.+.+.++|+||.|++...
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp~~~---- 76 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGSY---- 76 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHHH----
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccccEEEEecCchH----
Confidence 58999997 99999999988763 344577766543221 1111111 11111123356789999999886542
Q ss_pred HHHHHHHHHHhcCCC-eEEEEccCe
Q 024417 159 PGDVRLAALSWNGEG-SFLFTSSSA 182 (268)
Q Consensus 159 ~~~~~~~~~~~~gvk-r~V~~SS~~ 182 (268)
...+...+ .+.|.+ .+|=.|+..
T Consensus 77 s~~~~~~l-~~~g~~~~VIDlSsdf 100 (147)
T d1mb4a1 77 TEKVYPAL-RQAGWKGYWIDAASTL 100 (147)
T ss_dssp HHHHHHHH-HHTTCCSEEEESSSTT
T ss_pred HHHHhHHH-HHcCCceEEEeCCccc
Confidence 22222221 345654 466677643
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.12 E-value=0.00037 Score=54.53 Aligned_cols=66 Identities=14% Similarity=0.176 Sum_probs=53.0
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc----cccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT----EATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~----~~~~~~D~Vi~~a~ 151 (268)
..+|||.|+ |-+|...++.++.. |.+|+++++++++.+.+++.|.+.+. .|. ....++|+||.+.+
T Consensus 28 g~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 28 GEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CCEEEEEeccccchhhhhhhhccc--ccccccccccccccccccccccceeeehhhhhhhhhccccccccccccc
Confidence 358999996 99999999999999 99999999998888877777775542 121 14578999999876
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=97.11 E-value=0.00047 Score=55.74 Aligned_cols=73 Identities=15% Similarity=0.146 Sum_probs=55.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL 156 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~ 156 (268)
+..++|+|-|.|-+|+++++.|.+. |.+|++.+.+.+........+.+.+..+.-...+||+++-||.....+
T Consensus 25 L~gk~v~IqG~G~VG~~~A~~L~~~--Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~~~DI~iPcA~~~~I~ 97 (201)
T d1c1da1 25 LDGLTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVIT 97 (201)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEecchHHHHHHHHhhcccccCccccccccceeeeccccccccc
Confidence 4457999999999999999999999 999999988776665555555554433322456899999998765443
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.11 E-value=0.00011 Score=57.93 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=48.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee-------ccCc----cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-------LKWT----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~-------~~D~----~~~~~~D~Vi~~a~~~ 153 (268)
|||-|+|.|.+|..++++|++. ||+|++.+|++++.+.+.+.+.... ..+. ..+...+.++-+..+.
T Consensus 2 MkIGvIGlG~MG~~ma~~L~~~--G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (178)
T d1pgja2 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG 79 (178)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred CEEEEEeehHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCc
Confidence 4799999999999999999999 9999999999888776654332111 1111 2456777777666553
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.10 E-value=0.004 Score=47.60 Aligned_cols=66 Identities=15% Similarity=0.126 Sum_probs=47.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchh----hhc------CCceee-ccCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LIN------MGITPS-LKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~----l~~------~~i~~~-~~D~~~~~~~D~Vi~~a~~ 152 (268)
+||.|+|+|.+|..++..|..+ +. ++..+++++++.+. +.. ...... ..|.+.+.++|+|+.+++.
T Consensus 4 ~KI~IIGaG~VG~~~a~~l~~~--~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~ 81 (150)
T d1t2da1 4 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF 81 (150)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence 5899999999999999877776 43 88899988765332 111 111222 2345789999999999984
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.00039 Score=54.00 Aligned_cols=68 Identities=13% Similarity=0.249 Sum_probs=53.1
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc----cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~----~~~~~~D~Vi~~a~~~ 153 (268)
..+|+|.|+|.||...++.++.. |.+++++++++++.+..++.|.+.+. .+. ...+++|+||.+.+..
T Consensus 31 G~~VlI~GaG~vG~~a~qlak~~--Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~ 104 (168)
T d1uufa2 31 GKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAP 104 (168)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CCEEEEeccchHHHHHHHHhhcc--cccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecc
Confidence 35899999999999999999988 99999999988877766666765432 111 2457899999998754
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=97.08 E-value=0.00058 Score=53.34 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=44.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe-CCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~-R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
.||.|+|+|.+|+.+++.|.+. ++.+++++. |+++... ..+.... .|. +...++|+|+.|.++..
T Consensus 4 irvgiiG~G~ig~~~~~~l~~~-~~~elvav~~~~~~~~~---~~~~~~~-~~~~~~~~~~D~Vvi~tp~~~ 70 (170)
T d1f06a1 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATLDT---KTPVFDV-ADVDKHADDVDVLFLCMGSAT 70 (170)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCCSS---SSCEEEG-GGGGGTTTTCSEEEECSCTTT
T ss_pred ceEEEECChHHHHHHHHHHHhC-CCcEEEEEEeccccccc---ccccccc-hhhhhhccccceEEEeCCCcc
Confidence 4799999999999999999875 688888664 4443321 1222211 222 35678999998877753
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=97.05 E-value=0.00093 Score=53.14 Aligned_cols=70 Identities=10% Similarity=-0.011 Sum_probs=50.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|..- |.+|.+.++...........++... .++ +.++.+|+|+.+.+.+.
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~~~~~-~~l~~~l~~sD~v~~~~plt~ 112 (188)
T d2naca1 42 LEAMHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKELNLTWH-ATREDMYPVCDVVTLNCPLHP 112 (188)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHGGGCSEEEECSCCCT
T ss_pred ccccceeeccccccchhhhhhhhcc--CceEEEEeecccccccccccccccc-CCHHHHHHhccchhhcccccc
Confidence 4457999999999999999999998 9999999987544333222233222 222 57889999987776544
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.04 E-value=0.00045 Score=54.22 Aligned_cols=69 Identities=20% Similarity=0.114 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhc-----CCceeeccCccccCCCCEEEEccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
.++|+|+|+|-.++.++..|.+. +.+|+++.|+.++.+.+.. ..+.....|......+|.||+|.+...
T Consensus 18 ~k~vlIlGaGGaarai~~aL~~~--~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiIN~tp~g~ 91 (171)
T d1p77a1 18 NQHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 91 (171)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCEEEEECCcHHHHHHHHHHccc--CceeeeccchHHHHHHHHHHHhhccccchhhhccccccccceeeecccccc
Confidence 57899999999999999999987 7899999999877655432 123333333335789999999987653
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.03 E-value=0.0016 Score=50.44 Aligned_cols=87 Identities=16% Similarity=0.260 Sum_probs=60.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeecc----Cc-c--------ccCCCCEEEEcc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK----WT-E--------ATQKFPYVIFCA 150 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~----D~-~--------~~~~~D~Vi~~a 150 (268)
.+|+|+|+|.+|...+..++.. |. +|+++++++++.+..++.|.+.+.. |. + .-.++|+||.+.
T Consensus 28 d~VlI~G~G~iG~~~~~~a~~~--G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 105 (171)
T d1pl8a2 28 HKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 105 (171)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CEEEEECCCccHHHHHHHHHHc--CCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence 4899999999999999999998 88 7999999988877767777655432 11 1 124899999998
Q ss_pred CCCCCCChHHHHHHHHHHhcCCCeEEEEc
Q 024417 151 PPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~gvkr~V~~S 179 (268)
+.. ..+...+.....-.++++++
T Consensus 106 G~~------~~~~~a~~~~~~gG~iv~~G 128 (171)
T d1pl8a2 106 GAE------ASIQAGIYATRSGGTLVLVG 128 (171)
T ss_dssp CCH------HHHHHHHHHSCTTCEEEECS
T ss_pred CCc------hhHHHHHHHhcCCCEEEEEe
Confidence 763 12333322222335777776
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.01 E-value=0.00047 Score=51.23 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=51.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc---c-----ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~---~-----~~~~~D~Vi~~a~ 151 (268)
++|+|+|.|-+|+.+++.|. +++|.+++.++++.+.+...++.++.+|. + .+.+++.++.+..
T Consensus 1 kHivI~G~g~~g~~l~~~L~----~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR----GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC----GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHc----CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 47899999999999999994 45678889988888777778999998886 1 4678999997654
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.00 E-value=0.00064 Score=53.62 Aligned_cols=32 Identities=28% Similarity=0.319 Sum_probs=27.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEe
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT 116 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~ 116 (268)
|+||.|+|+ ||+|+.|++.|.++ |..++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhC-CCCceEeeE
Confidence 789999997 99999999988775 788887664
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.99 E-value=0.0016 Score=47.23 Aligned_cols=66 Identities=17% Similarity=0.036 Sum_probs=48.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhh-hcCCceeeccC--ccccCCCCEEEEcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDEL-INMGITPSLKW--TEATQKFPYVIFCA 150 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l-~~~~i~~~~~D--~~~~~~~D~Vi~~a 150 (268)
..++|||+|.|.+|..-++.|++. |.+|++++..... ...+ ...++++...+ .+.+.+++.|+.+.
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at 80 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEA--GARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT 80 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHT--TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecC
Confidence 357999999999999999999999 9999999875443 2222 22345555433 34688899888553
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.97 E-value=0.005 Score=46.62 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=47.2
Q ss_pred eEEEEc-ccHHHHHHHHHHHhcCCCC--eEEEEeCCC--Ccch----hhhc-----CCceeeccCccccCCCCEEEEccC
Q 024417 86 DLLIVG-PGVLGRLVAEQWRQEHPGC--QIYGQTMTA--DHHD----ELIN-----MGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 86 kVLI~G-aG~IG~~L~~~L~~~~~G~--~V~~~~R~~--~~~~----~l~~-----~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
||.|+| +|.+|..++..|..+ +. ++..++.+. +... .+.. ...+....|.+.+.++|+||.+|+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~--~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG 79 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG 79 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred eEEEECCCCcHHHHHHHHHHhC--CCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecc
Confidence 899999 599999999999998 65 788888632 1111 1211 122333456678899999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
...
T Consensus 80 ~~~ 82 (142)
T d1o6za1 80 IPR 82 (142)
T ss_dssp CCC
T ss_pred ccc
Confidence 544
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.96 E-value=0.0014 Score=51.81 Aligned_cols=64 Identities=17% Similarity=0.206 Sum_probs=49.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|..- |.+|++.+|.+..... ....+. +.+..+|+|+.+++.+.
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~--g~~v~~~d~~~~~~~~-------~~~~~l~ell~~sDiv~~~~pl~~ 104 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPKEGPW-------RFTNSLEEALREARAAVCALPLNK 104 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCCCSSS-------CCBSCSHHHHTTCSEEEECCCCST
T ss_pred ccCceEEEeccccccccceeeeecc--ccccccccccccccce-------eeeechhhhhhccchhhccccccc
Confidence 4467899999999999999999999 9999999987543211 111233 57899999998887653
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=96.94 E-value=0.00078 Score=46.01 Aligned_cols=37 Identities=19% Similarity=0.399 Sum_probs=33.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
||+|.|+|.|.+|+.++.+-..- |++|++++-+++..
T Consensus 1 ~k~vgIlG~GQLgrMl~~Aa~~L--G~~v~vldp~~~~p 37 (78)
T d3etja2 1 MKQVCVLGNGQLGRMLRQAGEPL--GIAVWPVGLDAEPA 37 (78)
T ss_dssp CEEEEEEBCSHHHHHHHHHHGGG--TEEEEEECTTSCGG
T ss_pred CCEEEEEcCCHHHHHHHHHHHHc--CCEEEEEcCCCCCc
Confidence 67999999999999999999999 99999999876543
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=96.90 E-value=0.0001 Score=56.40 Aligned_cols=65 Identities=18% Similarity=0.129 Sum_probs=42.2
Q ss_pred EEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 87 VLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
|-++|+|.+|+++++.|.+. ++.+.+..|++++.+.+.+.+.....-..+..+.+|+||.|.++.
T Consensus 2 IgfIG~G~mg~~l~~~L~~~--~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d~ 66 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDR 66 (153)
T ss_dssp CEEESCCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTT
T ss_pred EEEEeCcHHHHHHHHHHHhC--CCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccch
Confidence 34789999999999988665 554567899988877776554333222236788999999888754
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.90 E-value=0.0033 Score=47.81 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=45.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhc-CCCCeEEEEeCCCCcch----hhhcC----Cceeec--cCccccCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHD----ELINM----GITPSL--KWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~-~~G~~V~~~~R~~~~~~----~l~~~----~i~~~~--~D~~~~~~~D~Vi~~a~~ 152 (268)
|||.|+|+ |.+|..++-.|..+ .-..++..++..+ ... .+... ....+. .|.+.++++|+||.+++.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~ 79 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence 58999995 99999999887543 1246899998754 221 12211 111121 234578999999999986
Q ss_pred CC
Q 024417 153 SR 154 (268)
Q Consensus 153 ~~ 154 (268)
..
T Consensus 80 ~~ 81 (145)
T d2cmda1 80 RR 81 (145)
T ss_dssp CC
T ss_pred cC
Confidence 43
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.89 E-value=0.00051 Score=54.03 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=51.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec--c--Cc-c---------ccCCCCEEEEc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL--K--WT-E---------ATQKFPYVIFC 149 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~--~--D~-~---------~~~~~D~Vi~~ 149 (268)
.+|||+|+|.||...++.++.. |. +|+++++++++.+..++.|.+.+. . |. + .-.++|+||.+
T Consensus 30 ~~VlV~GaG~iG~~~~~~ak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~ 107 (182)
T d1vj0a2 30 KTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 107 (182)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECCCccchhheeccccc--ccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeec
Confidence 5899999999999999999998 97 799999998887777777754332 1 11 1 12469999999
Q ss_pred cCCC
Q 024417 150 APPS 153 (268)
Q Consensus 150 a~~~ 153 (268)
.+..
T Consensus 108 vG~~ 111 (182)
T d1vj0a2 108 TGDS 111 (182)
T ss_dssp SSCT
T ss_pred CCch
Confidence 8763
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.88 E-value=0.00043 Score=54.07 Aligned_cols=66 Identities=11% Similarity=0.162 Sum_probs=49.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhc-CCceeeccCccccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~-~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
.++|||+|+|-.++.++..|.+. |. +|+++.|+.++.+.+.. .+.... +.....++|.||+|.+..
T Consensus 17 ~~~vlIlGaGGaarai~~aL~~~--g~~~I~I~nR~~~ka~~L~~~~~~~~~--~~~~~~~~DliINaTpiG 84 (167)
T d1npya1 17 NAKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALYGYAYI--NSLENQQADILVNVTSIG 84 (167)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHHTCEEE--SCCTTCCCSEEEECSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEecccHHHHHHHHHhhhhhhh--hcccccchhhheeccccC
Confidence 46899999999999999999999 86 79999999887666543 233222 112346789999987643
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.84 E-value=0.00063 Score=53.77 Aligned_cols=92 Identities=12% Similarity=0.002 Sum_probs=53.7
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh---c---CCceeeccCcc-ccCCCCEEEEccCCCCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N---MGITPSLKWTE-ATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~---~---~~i~~~~~D~~-~~~~~D~Vi~~a~~~~~ 155 (268)
|+||.|+|+ |++|+.|++.|.+ ||..++..+..+...-+.+. . ........|.+ ...++|+|+.+.+...
T Consensus 1 MikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~~~- 78 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAGA- 78 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTTH-
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEccccHH-
Confidence 789999997 9999999998876 47889887754322211111 1 01111122332 3457999997776542
Q ss_pred CChHHHHHHHHHHhcCCCeEEEEccCeee
Q 024417 156 LDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (268)
Q Consensus 156 ~~~~~~~~~~~~~~~gvkr~V~~SS~~vY 184 (268)
. ...+ .+....++|=.|+..=+
T Consensus 79 ---s---~~~~-~~~~~~~VIDlSadfRl 100 (176)
T d1vkna1 79 ---S---YDLV-RELKGVKIIDLGADFRF 100 (176)
T ss_dssp ---H---HHHH-TTCCSCEEEESSSTTTC
T ss_pred ---H---HHHH-HhhccceEEecCccccc
Confidence 1 2222 22233577777775433
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0013 Score=47.99 Aligned_cols=38 Identities=24% Similarity=0.417 Sum_probs=34.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
...||.|+|.|.+|+.++....+. |++|++++.+++..
T Consensus 10 ~~~kigIlGgGQL~rMla~aA~~l--G~~v~v~d~~~~~P 47 (111)
T d1kjqa2 10 AATRVMLLGSGELGKEVAIECQRL--GVEVIAVDRYADAP 47 (111)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTT--TCEEEEEESSTTCG
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCCCCCc
Confidence 456899999999999999999999 99999999876643
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.81 E-value=0.00058 Score=53.72 Aligned_cols=93 Identities=14% Similarity=0.314 Sum_probs=64.1
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc---c------ccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---E------ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~---~------~~~~~D~Vi~~a~ 151 (268)
..+|||.|+ |-+|..+++..+.. |.+|+++++++++.+.++..|.+.++ .|. + .-.++|+|+++.+
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG 107 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVG 107 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecC
Confidence 358999997 99999999999999 99999999998888777777765432 121 1 3468999999986
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEccCeeec
Q 024417 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYD 185 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~vYg 185 (268)
.. . ....+.....-.+++.++....|+
T Consensus 108 ~~----~---~~~~~~~l~~~G~~v~~G~~~~~~ 134 (182)
T d1v3va2 108 GE----F---LNTVLSQMKDFGKIAICGAISVYN 134 (182)
T ss_dssp HH----H---HHHHGGGEEEEEEEEECCCGGGTT
T ss_pred ch----h---hhhhhhhccCCCeEEeecceeecc
Confidence 32 1 222221112224677766655554
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.80 E-value=0.00083 Score=53.24 Aligned_cols=70 Identities=14% Similarity=0.201 Sum_probs=43.1
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-------cCCceeec-cCccccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGITPSL-KWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~-~D~~~~~~~D~Vi~~a~~~ 153 (268)
++.||.|+|+ |++|+.|++.|.++ |..++..+......-..+. ........ .+.+...++|+|+.+.+..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~ 82 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHG 82 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSS
T ss_pred CccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccc
Confidence 3458999997 99999999999875 7889887753322111111 11111111 1113567899999777654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.78 E-value=0.0013 Score=52.61 Aligned_cols=70 Identities=16% Similarity=0.102 Sum_probs=49.5
Q ss_pred CCCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 81 GVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 81 ~~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
....++|.|+|.|-||+.+++.|..- |.+|.+.++....... ...++... .++ +.+..+|+|+.+.+.+.
T Consensus 46 eL~gktvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~-~~~~~~~~-~~l~~ll~~sD~i~~~~plt~ 116 (193)
T d1mx3a1 46 RIRGETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVE-RALGLQRV-STLQDLLFHSDCVTLHCGLNE 116 (193)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHH-HHHTCEEC-SSHHHHHHHCSEEEECCCCCT
T ss_pred eeeCceEEEeccccccccceeeeecc--ccceeeccCcccccch-hhhccccc-cchhhccccCCEEEEeecccc
Confidence 34567999999999999999999998 9999999986543221 12233222 233 46778888887776543
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.001 Score=51.74 Aligned_cols=69 Identities=14% Similarity=0.093 Sum_probs=50.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
+..|+++|+|.|.||+.+++.|+.. |.+|++.+.+|.+.-+..-.|.+.... .+++...|+||-+.+..
T Consensus 22 l~Gk~v~V~GyG~iG~g~A~~~rg~--G~~V~v~e~dp~~al~A~~dG~~v~~~-~~a~~~adivvtaTGn~ 90 (163)
T d1li4a1 22 IAGKVAVVAGYGDVGKGCAQALRGF--GARVIITEIDPINALQAAMEGYEVTTM-DEACQEGNIFVTTTGCI 90 (163)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCH-HHHTTTCSEEEECSSCS
T ss_pred ecCCEEEEeccccccHHHHHHHHhC--CCeeEeeecccchhHHhhcCceEeeeh-hhhhhhccEEEecCCCc
Confidence 3457999999999999999999999 999999999764432222234444322 25778889888776643
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.72 E-value=0.0018 Score=51.16 Aligned_cols=90 Identities=14% Similarity=0.148 Sum_probs=54.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC-CCcch-hhhcCCceeec----------------cCc-cccCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHD-ELINMGITPSL----------------KWT-EATQKFP 144 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~-~~~~~-~l~~~~i~~~~----------------~D~-~~~~~~D 144 (268)
|-||.|.|.|.||+.++|.|.++ |+.+|+++... +.... .+...+..... ++. +...++|
T Consensus 1 MIKVaINGfGRIGR~v~Ral~~~-~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEECCCHHHHHHHHHHHhC-CCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence 56899999999999999999886 57899887543 32211 11111211111 111 2456899
Q ss_pred EEEEccCCCCCCChHHHHHHHHHHhcCCCeEEEEcc
Q 024417 145 YVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSS 180 (268)
Q Consensus 145 ~Vi~~a~~~~~~~~~~~~~~~~~~~~gvkr~V~~SS 180 (268)
+||-|.+.... .+..+.. .+.| +|+|+.++
T Consensus 80 iViecTG~f~~---~e~a~~h--l~~G-~KvIi~~~ 109 (178)
T d1b7go1 80 IVVDTTPNGVG---AQYKPIY--LQLQ-RNAIFQGG 109 (178)
T ss_dssp EEEECCSTTHH---HHHHHHH--HHTT-CEEEECTT
T ss_pred EEEECCCCcCC---HHHHHHH--HHcC-CEEEEECC
Confidence 99999987531 2222222 2345 67777643
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.72 E-value=0.0035 Score=49.39 Aligned_cols=68 Identities=21% Similarity=0.214 Sum_probs=49.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcch-----------------------hhhcCCceeecc---Cc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------------------ELINMGITPSLK---WT 137 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~-----------------------~l~~~~i~~~~~---D~ 137 (268)
.++|+|+|+|.-|...+..|.++ ||+|+.+.+.+.--- .++..+++.... +.
T Consensus 43 ~k~V~IIGaGPAGL~AA~~la~~--G~~Vtl~E~~~~~GG~l~~~~~~p~~~~~~~~~~~~~~~~~~~gV~i~l~~~Vt~ 120 (179)
T d1ps9a3 43 KKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEVTGVTLKLNHTVTA 120 (179)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHHHTCEEEESCCCCS
T ss_pred CcEEEEECccHHHHHHHHHHHhh--ccceEEEeccCccCceEEEEEeCcccchHHHHHHHHHHhhhcCCeEEEeCCEEcc
Confidence 57999999999999999999999 999999998643110 012234544332 22
Q ss_pred cccCCCCEEEEccCCC
Q 024417 138 EATQKFPYVIFCAPPS 153 (268)
Q Consensus 138 ~~~~~~D~Vi~~a~~~ 153 (268)
+...++|.||...+..
T Consensus 121 ~~~~~~d~vilAtG~~ 136 (179)
T d1ps9a3 121 DQLQAFDETILASGIP 136 (179)
T ss_dssp SSSCCSSEEEECCCEE
T ss_pred cccccceeEEEeecCC
Confidence 4567889999887753
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.71 E-value=0.00097 Score=52.08 Aligned_cols=66 Identities=15% Similarity=0.245 Sum_probs=52.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc--C--cc-----ccCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--W--TE-----ATQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~--D--~~-----~~~~~D~Vi~~a~~ 152 (268)
.+|||.|+ |-+|...++..+.. |.+|+++++++++.+.++..|.+.+.- | .+ .-+++|+|+.+.+.
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcH
Confidence 46999996 99999999999999 999999999999988888777665431 1 11 23579999998764
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.70 E-value=0.00075 Score=45.99 Aligned_cols=43 Identities=19% Similarity=0.397 Sum_probs=37.5
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG 129 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~ 129 (268)
.+|||.|+ |-+|...++.++.. |++|+++++++++.+.+++.|
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~~~~lG 76 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLG 76 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHT
T ss_pred CcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHHCC
Confidence 57999986 99999999999998 999999999998887766544
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.66 E-value=0.00091 Score=52.33 Aligned_cols=68 Identities=16% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC---CceeeccCc----cccCCCCEEEEccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~---~i~~~~~D~----~~~~~~D~Vi~~a~~~ 153 (268)
.-+|+|+|+|..|..-++.++.. |.+|+++|.+.++.++++.. .++....+. +.++++|+||-++-..
T Consensus 32 pa~V~ViGaGvaG~~A~~~A~~l--GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalip 106 (168)
T d1pjca1 32 PGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVP 106 (168)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CcEEEEECCChHHHHHHHHHhhC--CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence 35899999999999999999999 99999999998877666542 344443333 4688999999988643
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.66 E-value=0.0017 Score=51.88 Aligned_cols=70 Identities=14% Similarity=0.081 Sum_probs=49.2
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|..- |.+|.+.++.............. ...+. +.++.+|+|+.+.+.+.
T Consensus 45 l~g~tvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~~~-~~~~l~~ll~~sD~v~l~~plt~ 115 (191)
T d1gdha1 45 LDNKTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASYQAT-FHDSLDSLLSVSQFFSLNAPSTP 115 (191)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHHTCE-ECSSHHHHHHHCSEEEECCCCCT
T ss_pred ecccceEEeecccchHHHHHHHHhh--ccccccccccccccchhhccccc-ccCCHHHHHhhCCeEEecCCCCc
Confidence 3457899999999999999999998 99999999865443222111111 11233 47788999987776543
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.65 E-value=0.0013 Score=48.53 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=31.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|-.++..|.+. |.+|+.+.+.+.
T Consensus 31 ~~vvIIGgG~iG~E~A~~l~~~--g~~Vtli~~~~~ 64 (121)
T d1d7ya2 31 SRLLIVGGGVIGLELAATARTA--GVHVSLVETQPR 64 (121)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECcchhHHHHHHHhhcc--cceEEEEeeccc
Confidence 6899999999999999999999 999999998754
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.63 E-value=0.0013 Score=47.84 Aligned_cols=34 Identities=15% Similarity=0.327 Sum_probs=31.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|-.++..|.+. |.+|+.+.|.+.
T Consensus 23 ~~v~IiGgG~ig~E~A~~l~~~--G~~Vtlve~~~~ 56 (117)
T d1ebda2 23 KSLVVIGGGYIGIELGTAYANF--GTKVTILEGAGE 56 (117)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECCCccceeeeeeeccc--ccEEEEEEecce
Confidence 5899999999999999999999 999999998754
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.60 E-value=0.00094 Score=51.99 Aligned_cols=67 Identities=16% Similarity=0.248 Sum_probs=51.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc---c------ccCCCCEEEEccC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---E------ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~---~------~~~~~D~Vi~~a~ 151 (268)
..+|||.|+ |.+|...++.++.. |.+|+++++++++.+.+++.|.+.+. .|. + .-.++|+|+.+.+
T Consensus 29 g~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g 106 (174)
T d1yb5a2 29 GESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA 106 (174)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CCEEEEEecccccccccccccccc--CcccccccccccccccccccCcccccccccccHHHHhhhhhccCCceEEeeccc
Confidence 358999996 99999999999999 99999999987777777777765442 121 1 1356899998876
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 107 ~ 107 (174)
T d1yb5a2 107 N 107 (174)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.58 E-value=0.0033 Score=53.98 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=28.1
Q ss_pred CeEEEEccc---HHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG---~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
+-.||||+| -||+.++++|.++ |.+|....+..
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~ 38 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPP 38 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGG
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCch
Confidence 457899964 7999999999999 99999887653
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.56 E-value=0.0031 Score=49.89 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=41.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS 133 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~ 133 (268)
-+|+|+|+|..|..-++..+.- |.+|+++|.++++.++++..+-+++
T Consensus 30 a~VvViGaGvaG~~Aa~~A~~l--GA~V~v~D~~~~~~~~l~~l~~~~i 76 (183)
T d1l7da1 30 ARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLGGKFI 76 (183)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTTCEEC
T ss_pred cEEEEEcCcHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhhcceE
Confidence 4899999999999999999999 9999999999988888876654443
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.0015 Score=47.67 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|..++..|.+. |++|+.+.|.+.
T Consensus 22 ~~vvIiGgG~ig~E~A~~l~~~--G~~Vtlve~~~~ 55 (116)
T d1gesa2 22 ERVAVVGAGYIGVELGGVINGL--GAKTHLFEMFDA 55 (116)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEECCChhhHHHHHHhhcc--ccEEEEEeecch
Confidence 5899999999999999999999 999999999753
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.55 E-value=0.0011 Score=53.36 Aligned_cols=67 Identities=12% Similarity=0.153 Sum_probs=48.5
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.|..- |.+|++.++...... ...+... .+. +.++.+|+|+.+++.+.
T Consensus 41 l~gk~vgIiG~G~IG~~va~~l~~f--g~~V~~~d~~~~~~~--~~~~~~~--~~l~~~l~~sDii~~~~plt~ 108 (197)
T d1j4aa1 41 VRDQVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPEL--EKKGYYV--DSLDDLYKQADVISLHVPDVP 108 (197)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHH--HHTTCBC--SCHHHHHHHCSEEEECSCCCG
T ss_pred ccCCeEEEecccccchhHHHhHhhh--cccccccCccccccc--ccceeee--ccccccccccccccccCCccc
Confidence 3457999999999999999999988 999999987644322 1222221 233 46788999988877543
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.53 E-value=0.0015 Score=48.11 Aligned_cols=34 Identities=18% Similarity=0.394 Sum_probs=31.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++++|+|+|+||-.++..|.+. |.+|+.+.+.+.
T Consensus 24 ~~~vIiG~G~ig~E~A~~l~~l--G~~Vtii~~~~~ 57 (122)
T d1v59a2 24 KRLTIIGGGIIGLEMGSVYSRL--GSKVTVVEFQPQ 57 (122)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CeEEEECCCchHHHHHHHHHhh--CcceeEEEeccc
Confidence 5899999999999999999999 999999998754
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.49 E-value=0.0016 Score=47.62 Aligned_cols=34 Identities=18% Similarity=0.204 Sum_probs=31.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|-.++..|.+. |.+|+.+.|.+.
T Consensus 23 ~~v~IiGgG~iG~E~A~~l~~~--g~~Vtlv~~~~~ 56 (117)
T d1onfa2 23 KKIGIVGSGYIAVELINVIKRL--GIDSYIFARGNR 56 (117)
T ss_dssp SEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSS
T ss_pred CEEEEECCchHHHHHHHHHHhc--cccceeeehhcc
Confidence 6899999999999999999999 999999998643
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.48 E-value=0.0039 Score=48.83 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=46.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe-CCCCc-chhhhcCCceeeccC-----------------c-cccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT-MTADH-HDELINMGITPSLKW-----------------T-EATQKF 143 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~-R~~~~-~~~l~~~~i~~~~~D-----------------~-~~~~~~ 143 (268)
++||.|-|.|-||+.+++.|.++ +..+|.++- ..+.. ...+...+...+..+ . +...++
T Consensus 2 ~irIaINGfGRIGR~v~Ral~~~-~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 80 (172)
T d2czca2 2 KVKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (172)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred cEEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccC
Confidence 46899999999999999999876 477888764 33322 122333333332211 0 245799
Q ss_pred CEEEEccCCCC
Q 024417 144 PYVIFCAPPSR 154 (268)
Q Consensus 144 D~Vi~~a~~~~ 154 (268)
|+|+-|.|...
T Consensus 81 DvViEcTG~f~ 91 (172)
T d2czca2 81 DIIVDATPGGI 91 (172)
T ss_dssp SEEEECCSTTH
T ss_pred CEEEECCCCCC
Confidence 99999998864
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.48 E-value=0.002 Score=50.06 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=51.8
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
+..|+++|.|.|++|+-++++|+.. |.+|+++..+|-+.-+..-.|.+....+ ++++..|++|-+.+...
T Consensus 21 laGk~vvV~GYG~vGrG~A~~~rg~--Ga~V~V~E~DPi~alqA~mdGf~v~~~~-~a~~~aDi~vTaTGn~~ 90 (163)
T d1v8ba1 21 ISGKIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVMEGFNVVTLD-EIVDKGDFFITCTGNVD 90 (163)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTTCEECCHH-HHTTTCSEEEECCSSSS
T ss_pred ecCCEEEEecccccchhHHHHHHhC--CCEEEEEecCchhhHHHHhcCCccCchh-HccccCcEEEEcCCCCc
Confidence 3467999999999999999999999 9999999997744322222455543222 57888999887766543
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.44 E-value=0.0012 Score=51.63 Aligned_cols=67 Identities=18% Similarity=0.192 Sum_probs=50.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec-c-C--c-c----c--cCCCCEEEEccCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL-K-W--T-E----A--TQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~-~-D--~-~----~--~~~~D~Vi~~a~~ 152 (268)
.+|+|.|+|.||...++.++.. |. +|+++++++++.+..++.|.+... . + . + . -.++|+||.+++.
T Consensus 29 ~~VlI~GaG~vGl~~~q~ak~~--Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~ 106 (174)
T d1jqba2 29 SSVVVIGIGAVGLMGIAGAKLR--GAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGG 106 (174)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred CEEEEEcCCcchhhhhhhhhcc--cccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCC
Confidence 4799999999999999999988 87 799999988777766666754332 1 1 1 1 1 2469999999986
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 107 ~ 107 (174)
T d1jqba2 107 S 107 (174)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.41 E-value=0.0024 Score=46.95 Aligned_cols=34 Identities=21% Similarity=0.425 Sum_probs=31.3
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.++|+|+|+|++|..++..|.+. |.+|+.+.+.+
T Consensus 30 ~k~vvViGgG~iG~E~A~~l~~~--g~~Vtlie~~~ 63 (123)
T d1nhpa2 30 VNNVVVIGSGYIGIEAAEAFAKA--GKKVTVIDILD 63 (123)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSS
T ss_pred CCEEEEECChHHHHHHHHHhhcc--ceEEEEEEecC
Confidence 36899999999999999999999 99999998864
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.39 E-value=0.002 Score=46.75 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=31.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++++|+|+|++|-.++..|.+. |++|+.+.|.+.
T Consensus 22 ~~vvIiGgG~~G~E~A~~l~~~--g~~Vtlve~~~~ 55 (115)
T d1lvla2 22 QHLVVVGGGYIGLELGIAYRKL--GAQVSVVEARER 55 (115)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHhhc--ccceEEEeeecc
Confidence 5899999999999999999999 999999998654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.39 E-value=0.0015 Score=50.86 Aligned_cols=66 Identities=15% Similarity=0.171 Sum_probs=52.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc---c----c--cCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---E----A--TQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~---~----~--~~~~D~Vi~~a~~ 152 (268)
.+|||.|+ |.+|..+++.++.. |.+|+++++++++.+.+++.|.+.+. .+. + . -.++|+|+.+.+.
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAG 104 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred CEEEEECCCCCcccccchhhccc--cccceeeecccccccccccccccccccCCccCHHHHHHHHhCCCCEEEEEecccc
Confidence 58999885 99999999999999 99999999988777777777765543 121 1 1 2579999999873
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.39 E-value=0.0024 Score=50.56 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|.||+.+++.+..- |.+|.+.++...+... ...+++.. +. +.++.+|+|+.+.+.+.
T Consensus 42 l~~k~vgiiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~~-~~~~~~~~--~l~ell~~sDiv~~~~Plt~ 110 (184)
T d1ygya1 42 IFGKTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSPARA-AQLGIELL--SLDDLLARADFISVHLPKTP 110 (184)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCHHHH-HHHTCEEC--CHHHHHHHCSEEEECCCCST
T ss_pred ccceeeeeccccchhHHHHHHhhhc--cceEEeecCCCChhHH-hhcCceec--cHHHHHhhCCEEEEcCCCCc
Confidence 3457899999999999999999988 9999999987544322 22233322 33 46788999988877654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.36 E-value=0.0022 Score=51.42 Aligned_cols=66 Identities=11% Similarity=0.184 Sum_probs=48.4
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~ 154 (268)
...++|.|+|.|-||+.+++.|..- |.+|++.++...+... ..++. .+. +.+..+|+|+.+.+.+.
T Consensus 43 l~~ktvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~---~~~~~--~~l~~l~~~~D~v~~~~plt~ 109 (199)
T d1dxya1 43 LGQQTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKGDH---PDFDY--VSLEDLFKQSDVIDLHVPGIE 109 (199)
T ss_dssp GGGSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSCC---TTCEE--CCHHHHHHHCSEEEECCCCCG
T ss_pred ccceeeeeeeccccccccccccccc--ceeeeccCCccchhhh---cchhH--HHHHHHHHhcccceeeecccc
Confidence 4457999999999999999999998 9999999986543211 12222 233 46788999988777553
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.35 E-value=0.0025 Score=46.64 Aligned_cols=34 Identities=21% Similarity=0.444 Sum_probs=31.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|+||-.++..|.+. |.+|+.+.+...
T Consensus 23 ~~i~IiG~G~ig~E~A~~l~~~--G~~Vtiv~~~~~ 56 (119)
T d3lada2 23 GKLGVIGAGVIGLELGSVWARL--GAEVTVLEAMDK 56 (119)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECCChHHHHHHHHHHHc--CCceEEEEeecc
Confidence 6899999999999999999999 999999998653
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.33 E-value=0.0021 Score=47.21 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|-.++..|.+. |++|+.+.|.+.
T Consensus 33 ~~vvIiGgG~iG~E~A~~l~~~--g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIGGGFIGLELAGNLAEA--GYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT--TCEEEEECSSSC
T ss_pred CcEEEECCcHHHHHHHHHhhcc--cceEEEEecccc
Confidence 5899999999999999999999 999999998753
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.33 E-value=0.0044 Score=48.37 Aligned_cols=87 Identities=17% Similarity=0.219 Sum_probs=60.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec----cCc--c------ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT--E------ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~----~D~--~------~~~~~D~Vi~~a~ 151 (268)
.+|+|+|+|.||...++.++.. |. .|++.++++++.+..++.|.+.+. .|. + .-.++|+||.|++
T Consensus 30 ~~VlV~G~G~iGl~a~~~ak~~--Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G 107 (174)
T d1e3ia2 30 STCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 107 (174)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CEEEEECCChHHHHHHHHHHHh--CCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecc
Confidence 5899999999999999999998 87 688888888887766667765432 121 0 2368999999998
Q ss_pred CCCCCChHHHHHHHHHH-hcCCCeEEEEc
Q 024417 152 PSRSLDYPGDVRLAALS-WNGEGSFLFTS 179 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~-~~gvkr~V~~S 179 (268)
.. ..+...+.. +.+-.+++.++
T Consensus 108 ~~------~~~~~a~~~~~~g~G~~v~vG 130 (174)
T d1e3ia2 108 TA------QTLKAAVDCTVLGWGSCTVVG 130 (174)
T ss_dssp CH------HHHHHHHHTBCTTTCEEEECC
T ss_pred cc------hHHHHHHHHhhcCCeEEEecC
Confidence 63 233333322 23335787776
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.32 E-value=0.0022 Score=51.54 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=30.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
+||+|+|+|..|...|.+|.++ |++|++++|..
T Consensus 7 ~kVvVIGaGiaGl~~A~~L~~~--G~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLGSGVIGLSSALILARK--GYSVHILARDL 39 (268)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CcEEEECccHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 5899999999999999999999 99999999853
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.30 E-value=0.0033 Score=49.33 Aligned_cols=67 Identities=22% Similarity=0.301 Sum_probs=52.7
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec-cC---cc-----ccCCCCEEEEccCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KW---TE-----ATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~-~D---~~-----~~~~~D~Vi~~a~~~ 153 (268)
.+|||.|+ |-+|...++.++.. |.+|+++++++++.+.++..|.+.++ .+ .+ .-+++|+||.+.+..
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg~ 109 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR 109 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTT
T ss_pred CEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCch
Confidence 47999996 99999999999999 99999999999998887777765443 11 11 235899999988754
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=96.29 E-value=0.0034 Score=44.97 Aligned_cols=66 Identities=18% Similarity=0.153 Sum_probs=41.6
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chh--hh-cCCce--------eeccCccccCCCCEEEEc
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE--LI-NMGIT--------PSLKWTEATQKFPYVIFC 149 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~--l~-~~~i~--------~~~~D~~~~~~~D~Vi~~ 149 (268)
...++|+|+|+|.-|..++..|... +-+|+.+.|.... ... +. ...+. ....|-..+.++|.||+|
T Consensus 30 f~gK~VlVVG~g~Sa~dia~~l~~~--ak~v~~~~~r~~~~~~~~~~~~~~~i~~~~~~~~~v~~~dG~~~~~vD~Ii~C 107 (107)
T d2gv8a2 30 FVGESVLVVGGASSANDLVRHLTPV--AKHPIYQSLLGGGDIQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYC 107 (107)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTT--SCSSEEEECTTCCSCBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEEC
T ss_pred cCCCeEEEECCCCCHHHHHHHHHHh--cCEEEEEEecCccccccccceecCCeeEEecCCCEEEEcCCCEEeCCCEEEEC
Confidence 4468999999999999999999887 6665555554322 110 00 01111 111233467889999988
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.29 E-value=0.0023 Score=47.12 Aligned_cols=32 Identities=16% Similarity=0.110 Sum_probs=30.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
++++|+|+|+||..++..|.+. |.+|+.+.|+
T Consensus 21 ~~vvIIGgG~iG~E~A~~l~~l--G~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGASYVALECAGFLAGI--GLDVTVMVRS 52 (122)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CeEEEECCCccHHHHHHHHhhc--CCeEEEEEec
Confidence 4799999999999999999999 9999999875
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.27 E-value=0.0019 Score=50.22 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=52.2
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCcc-------c--cCCCCEEEEccCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWTE-------A--TQKFPYVIFCAPP 152 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~~-------~--~~~~D~Vi~~a~~ 152 (268)
.+|||.|+ |.+|..+++.++.. |.+|+++++++++.+.+++.|.+.++ .+.+ . -.++|+|+.+.+.
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~ 107 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR 107 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCG
T ss_pred CEEEEEccccccchHHHHHHHHh--CCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCccH
Confidence 58999986 99999999999999 99999999999888887777765442 1211 1 2468999998875
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 108 ~ 108 (179)
T d1qora2 108 D 108 (179)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.27 E-value=0.0049 Score=48.12 Aligned_cols=87 Identities=15% Similarity=0.206 Sum_probs=61.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec----cCc--c------ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT--E------ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~----~D~--~------~~~~~D~Vi~~a~ 151 (268)
..|+|+|+|-+|...++.++.. |. +|+++++++++.+..++.|.+.+. .|. + .-.++|+||.+.+
T Consensus 31 ~tVlI~G~GgvGl~ai~~ak~~--G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g 108 (176)
T d1d1ta2 31 STCVVFGLGGVGLSVIMGCKSA--GASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIG 108 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSC
T ss_pred CEEEEECCCchhHHHHHHHHHc--CCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCC
Confidence 4799999999999999999998 85 899999999988776666665432 121 1 2358999999988
Q ss_pred CCCCCChHHHHHHHHH-HhcCCCeEEEEc
Q 024417 152 PSRSLDYPGDVRLAAL-SWNGEGSFLFTS 179 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~-~~~gvkr~V~~S 179 (268)
... ..+..+. ...+-.++|.++
T Consensus 109 ~~~------~~~~a~~~~~~~~G~~v~vG 131 (176)
T d1d1ta2 109 HLE------TMIDALASCHMNYGTSVVVG 131 (176)
T ss_dssp CHH------HHHHHHTTSCTTTCEEEECS
T ss_pred chH------HHHHHHHHhhcCCeEEEEEE
Confidence 632 2333321 123345788777
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.26 E-value=0.002 Score=49.38 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=50.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC----c-----cccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW----T-----EATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D----~-----~~~~~~D~Vi~~a~ 151 (268)
.+|||.|+|-+|...++.++.. |.+|+++++++++.+..++.|.+.+... . +...+.|.+|.+++
T Consensus 29 ~~vlv~G~G~iG~~a~~~a~~~--g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 29 EWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CEEEEeecccchhhhhHHHhcC--CCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecC
Confidence 5899999999999999988888 9999999999888887777787665431 1 13456777777664
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.26 E-value=0.0027 Score=47.37 Aligned_cols=35 Identities=23% Similarity=0.310 Sum_probs=32.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
.++|+|+|+|++|-.++..|.+. |.+|+.+.+.+.
T Consensus 35 ~k~v~VIGgG~iG~E~A~~l~~~--g~~Vtvie~~~~ 69 (133)
T d1q1ra2 35 DNRLVVIGGGYIGLEVAATAIKA--NMHVTLLDTAAR 69 (133)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCEEEEECCchHHHHHHHHHHhh--Ccceeeeeeccc
Confidence 36899999999999999999999 999999998654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.0025 Score=48.95 Aligned_cols=67 Identities=10% Similarity=0.038 Sum_probs=44.1
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCeEEEE-eCCCCcchhhh-cCCceeeccCc-cccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQ-TMTADHHDELI-NMGITPSLKWT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~-L~~~L~~~~~G~~V~~~-~R~~~~~~~l~-~~~i~~~~~D~-~~~~~~D~Vi~~a~~~ 153 (268)
+||.|+|+|.+|+. ..+.|.. .++.+++++ ++++++...+. ..++... .+. +..+++|+|+.+.++.
T Consensus 2 iri~iIG~G~~g~~~~~~~l~~-~~~~~i~~v~d~~~~~~~~~~~~~~~~~~-~~~~~l~~~~D~V~I~tp~~ 72 (164)
T d1tlta1 2 LRIGVVGLGGIAQKAWLPVLAA-ASDWTLQGAWSPTRAKALPICESWRIPYA-DSLSSLAASCDAVFVHSSTA 72 (164)
T ss_dssp EEEEEECCSTHHHHTHHHHHHS-CSSEEEEEEECSSCTTHHHHHHHHTCCBC-SSHHHHHTTCSEEEECSCTT
T ss_pred CEEEEEcCCHHHHHHHHHHHHh-CCCcEEEEEEechhHhhhhhhhccccccc-ccchhhhhhcccccccccch
Confidence 58999999999986 4555554 358888865 56666655543 2344332 222 3567899999887654
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.24 E-value=0.0022 Score=47.15 Aligned_cols=35 Identities=17% Similarity=0.491 Sum_probs=32.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~ 121 (268)
++++|+|+|+||-.++..|.+. |.+|+.+.|.+..
T Consensus 26 ~~~viiG~G~iglE~A~~~~~~--G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 26 KKLVVIGAGYIGLEMGSVWGRI--GSEVTVVEFASEI 60 (123)
T ss_dssp SEEEESCCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CeEEEEccchHHHHHHHHHHhc--CCeEEEEEEcccc
Confidence 5899999999999999999999 9999999997643
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.23 E-value=0.0031 Score=46.48 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=31.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|+||-.++..|.+. |.+|+.+.|.+.
T Consensus 23 k~vvIvGgG~iG~E~A~~l~~~--G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGAGYIAVEMAGILSAL--GSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEEcCCccHHHHHHHHhcC--CcEEEEEeeccc
Confidence 6899999999999999999999 999999999753
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.17 E-value=0.0054 Score=48.48 Aligned_cols=67 Identities=16% Similarity=0.137 Sum_probs=48.0
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~ 155 (268)
...++|.|+|.|.||+.+++.|..- |.+|++.++....... ... ...+. +.+..+|+|+.+++.+..
T Consensus 42 l~~~~vgiiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~----~~~-~~~~l~ell~~sDii~i~~plt~~ 109 (188)
T d1sc6a1 42 ARGKKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKLPLG----NAT-QVQHLSDLLNMSDVVSLHVPENPS 109 (188)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCCT----TCE-ECSCHHHHHHHCSEEEECCCSSTT
T ss_pred ccceEEEEeecccchhhhhhhcccc--cceEeeccccccchhh----hhh-hhhhHHHHHhhccceeecccCCcc
Confidence 4467999999999999999999988 9999999986433211 111 11222 467788999888776543
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.17 E-value=0.0065 Score=46.95 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=51.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeecc--Cc----c------ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLK--WT----E------ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~~--D~----~------~~~~~D~Vi~~a~ 151 (268)
.+|||.|+|-+|...+..++.. | .+|+++++++++.+...+.+...... +. + .-.++|+||.+.+
T Consensus 30 dtVlV~GaGG~G~~~~~~~~~~--g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G 107 (176)
T d2jhfa2 30 STCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 107 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCCcHHHHHHHHHHc--CCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCC
Confidence 4799999988999999999988 7 58999999998887777776554321 11 1 2358999999888
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 108 ~~ 109 (176)
T d2jhfa2 108 RL 109 (176)
T ss_dssp CH
T ss_pred ch
Confidence 64
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=96.13 E-value=0.0032 Score=47.79 Aligned_cols=36 Identities=17% Similarity=0.241 Sum_probs=30.8
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|||+|+|+|++|-.++..|++..+..+|+.+++++
T Consensus 2 gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 369999999999999999999983346899988765
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.10 E-value=0.0027 Score=48.76 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=39.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP 132 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~ 132 (268)
..+|+|.|+|.+|...++.++.. |.+|+++++++++.+..++.|.+.
T Consensus 28 g~~VlV~GaG~vG~~~~~~ak~~--G~~Vi~~~~~~~~~~~a~~~Ga~~ 74 (166)
T d1llua2 28 GQWVAISGIGGLGHVAVQYARAM--GLHVAAIDIDDAKLELARKLGASL 74 (166)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSE
T ss_pred CCEEEEeeccccHHHHHHHHHHc--CCccceecchhhHHHhhhccCccc
Confidence 35899999999999999988888 999999999988877766666543
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=96.09 E-value=0.0037 Score=48.21 Aligned_cols=93 Identities=12% Similarity=0.086 Sum_probs=53.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eCCCCcc--hhhhcCCceeeccCcc------ccCCCCEEEEccCCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHH--DELINMGITPSLKWTE------ATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~--~~l~~~~i~~~~~D~~------~~~~~D~Vi~~a~~~~~ 155 (268)
.||.|+|+|.+|+.+...+++++|..+++++ +|+++.. ...++.++.....+.+ ...++|+||.+.+....
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpag~h 84 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAH 84 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCHHHH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCchhH
Confidence 4899999999999755444455567788877 4665432 2223456655543221 34578999987664311
Q ss_pred CChHHHHHHHHHHhcCCCeEEEEccC
Q 024417 156 LDYPGDVRLAALSWNGEGSFLFTSSS 181 (268)
Q Consensus 156 ~~~~~~~~~~~~~~~gvkr~V~~SS~ 181 (268)
.+. ..........+++|-.|+.
T Consensus 85 ---~~~-~~~~~aa~~G~~VID~s~a 106 (157)
T d1nvmb1 85 ---VQN-EALLRQAKPGIRLIDLTPA 106 (157)
T ss_dssp ---HHH-HHHHHHHCTTCEEEECSTT
T ss_pred ---HHh-HHHHHHHHcCCEEEEcccc
Confidence 111 1111122334678888874
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.09 E-value=0.0036 Score=49.18 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=31.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
|||+|+|+|++|-.++..|++..++.+|+.+.|++
T Consensus 1 ~KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 68999999999999999999876678999998753
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.07 E-value=0.0075 Score=46.86 Aligned_cols=88 Identities=20% Similarity=0.246 Sum_probs=61.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec----cCc--c------ccCCCCEEEEcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT--E------ATQKFPYVIFCA 150 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~----~D~--~------~~~~~D~Vi~~a 150 (268)
..+|+|.|+|.+|...++.++.. |. +|+++++++++.+..++.|.+.+. .|. + .-.++|+||.+.
T Consensus 28 G~~VlV~GaGgvGl~a~~~ak~~--G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~ 105 (174)
T d1p0fa2 28 GSTCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECA 105 (174)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CCEEEEECCCchhHHHHHHHHHc--CCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcC
Confidence 35899999999999999999998 86 798999998888777777766543 221 1 125899999988
Q ss_pred CCCCCCChHHHHHHHHHH-hcCCCeEEEEc
Q 024417 151 PPSRSLDYPGDVRLAALS-WNGEGSFLFTS 179 (268)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-~~gvkr~V~~S 179 (268)
+.. ..+.+.+.. ..+-.++|.++
T Consensus 106 g~~------~~~~~~~~~~~~~~G~~v~vG 129 (174)
T d1p0fa2 106 GRI------ETMMNALQSTYCGSGVTVVLG 129 (174)
T ss_dssp CCH------HHHHHHHHTBCTTTCEEEECC
T ss_pred CCc------hHHHHHHHHHHHhcCceEEEE
Confidence 763 233333322 23345777766
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.05 E-value=0.0064 Score=46.78 Aligned_cols=67 Identities=18% Similarity=0.269 Sum_probs=49.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeecc-----Cc-c------ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK-----WT-E------ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~-----D~-~------~~~~~D~Vi~~a~ 151 (268)
.+|||.|+|-+|...++.++.. |. .|++.++++++.+..++.|.+.++- |. + .-.++|+||.+.+
T Consensus 30 ~tVlI~GaGGvG~~aiq~ak~~--G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G 107 (176)
T d2fzwa2 30 SVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 107 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEecchhHHHHHHHHHHHH--hcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence 4799999988999999999998 86 6777778877777666667554421 11 0 2358999999987
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 108 ~~ 109 (176)
T d2fzwa2 108 NV 109 (176)
T ss_dssp CH
T ss_pred CH
Confidence 53
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=96.02 E-value=0.004 Score=46.03 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=31.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++++|+|+|+||-.++..|.+. |.+|+.+.+.+.
T Consensus 27 ~~vvIiGgG~IG~E~A~~~~~~--G~~Vtive~~~~ 60 (125)
T d1ojta2 27 GKLLIIGGGIIGLEMGTVYSTL--GSRLDVVEMMDG 60 (125)
T ss_dssp SEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHhhcC--CCEEEEEEeecc
Confidence 5899999999999999999999 999999988653
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=96.00 E-value=0.0036 Score=50.75 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=31.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
+||+|+|+|.-|..++..|.++ |++|+++.|+++
T Consensus 5 ~kV~IiGaG~aGl~~A~~L~~~--G~~v~v~Er~~~ 38 (265)
T d2voua1 5 DRIAVVGGSISGLTAALMLRDA--GVDVDVYERSPQ 38 (265)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 5899999999999999999999 999999998754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.00 E-value=0.0027 Score=52.62 Aligned_cols=33 Identities=18% Similarity=0.253 Sum_probs=31.0
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
+|+|+|+|..|..++..|.+. |++|+++.+.++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~--G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 799999999999999999999 999999998753
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.99 E-value=0.0032 Score=51.65 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=29.9
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|..|..++.+|.++ |++|++++++.
T Consensus 6 DvvIIGaGi~Gls~A~~La~~--G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKE--NKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 499999999999999999999 99999999863
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.97 E-value=0.0059 Score=46.63 Aligned_cols=69 Identities=10% Similarity=0.076 Sum_probs=41.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC----e---EEEEeC--CCCcchhh----hcC---Cceee---ccCccccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC----Q---IYGQTM--TADHHDEL----INM---GITPS---LKWTEATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~----~---V~~~~R--~~~~~~~l----~~~---~i~~~---~~D~~~~~~~D 144 (268)
+||.|+|| |.+|++++..|... +. + ...++- +.++...+ ... ....+ ..+.+.++++|
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~--~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 82 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--cccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhccccc
Confidence 48999997 99999999999876 42 1 122222 11111111 111 11111 12346899999
Q ss_pred EEEEccCCCCC
Q 024417 145 YVIFCAPPSRS 155 (268)
Q Consensus 145 ~Vi~~a~~~~~ 155 (268)
+||.+++....
T Consensus 83 vViitaG~~~~ 93 (154)
T d1y7ta1 83 YALLVGAAPRK 93 (154)
T ss_dssp EEEECCCCCCC
T ss_pred EEEeecCcCCC
Confidence 99999986543
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.94 E-value=0.0065 Score=49.73 Aligned_cols=71 Identities=10% Similarity=0.083 Sum_probs=51.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhh-cCCceeeccCccccCCCCEEEEccCCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWTEATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~-~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~ 155 (268)
..++|+|-|.|-+|+++++.|.+. |..|++.+.+......+. ..+.+.+.-+...-.+||+++-||-....
T Consensus 38 ~g~~v~IqG~GnVG~~~a~~L~~~--Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA~~~~I 109 (230)
T d1leha1 38 EGLAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALGAVL 109 (230)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSCSCCB
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEeccccccccc
Confidence 357999999999999999999999 999999887765544332 23443332222245689999999976543
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.88 E-value=0.0054 Score=48.07 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=50.0
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeec--cCc---ccc--CCCCEEEEccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---EAT--QKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~--~D~---~~~--~~~D~Vi~~a~ 151 (268)
.+|||.|+ |-+|...++..+.. |.+|+++++++++.+.++..|.+.+. .|. +.+ ...|.||++.+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEEcc
Confidence 47999986 99999999999999 99999999999988877777766543 111 112 34688888765
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=95.88 E-value=0.011 Score=46.18 Aligned_cols=68 Identities=13% Similarity=0.104 Sum_probs=48.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhc--------CCceeecc---Cc----cccCCCCEEE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN--------MGITPSLK---WT----EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~--------~~i~~~~~---D~----~~~~~~D~Vi 147 (268)
.++|+|+|+|-.|+.++..|.+. |. +++...|++++.+.+.. ........ |. +.+..+|.||
T Consensus 18 ~k~vlIlGaGGaarai~~al~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiI 95 (182)
T d1vi2a1 18 GKTMVLLGAGGASTAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 95 (182)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCcHHHHHHHHHHhhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceec
Confidence 47999999999999999999998 76 78899998776543221 11111111 21 2467899999
Q ss_pred EccCCC
Q 024417 148 FCAPPS 153 (268)
Q Consensus 148 ~~a~~~ 153 (268)
++.+..
T Consensus 96 N~Tp~G 101 (182)
T d1vi2a1 96 NGTKVG 101 (182)
T ss_dssp ECSSTT
T ss_pred cccCCc
Confidence 998754
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.86 E-value=0.0046 Score=47.96 Aligned_cols=35 Identities=14% Similarity=0.080 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD 120 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~ 120 (268)
.+||+|+|+|..|...|..|.++ |+ +|+++.|.+.
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~--G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARL--GYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHHHHC--CCCeEEEEEecCc
Confidence 36999999999999999999999 98 5999998754
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.82 E-value=0.0059 Score=44.24 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=31.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|..++..|.+. |.+|+.+.|.+.
T Consensus 23 ~~vvVvGgG~ig~E~A~~l~~~--g~~vt~i~~~~~ 56 (121)
T d1mo9a2 23 STVVVVGGSKTAVEYGCFFNAT--GRRTVMLVRTEP 56 (121)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhc--chhheEeeccch
Confidence 6899999999999999999999 999999998754
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=95.80 E-value=0.019 Score=44.57 Aligned_cols=90 Identities=18% Similarity=0.276 Sum_probs=54.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC-CCCc-chhhhcCCceeecc--C---------------c-cccCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADH-HDELINMGITPSLK--W---------------T-EATQKF 143 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R-~~~~-~~~l~~~~i~~~~~--D---------------~-~~~~~~ 143 (268)
|++|.|-|.|.||+.+.+.|.++ ++.+|.++.- .+.. ...+...+...... + . +...++
T Consensus 1 M~~VgINGfGRIGR~v~R~l~~~-~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEcCcHHHHHHHHHHHhC-CCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 78999999999999999998776 4678877643 3322 12222223222211 0 0 245699
Q ss_pred CEEEEccCCCCCCChHHHHHHHHHHhcCCCeEEEEcc
Q 024417 144 PYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSS 180 (268)
Q Consensus 144 D~Vi~~a~~~~~~~~~~~~~~~~~~~~gvkr~V~~SS 180 (268)
|+|+-|.|.... .+..... ...|+ ++|+.++
T Consensus 80 DvViEcTG~f~~---~~~~~~h--l~~G~-K~vi~~~ 110 (171)
T d1cf2o1 80 DIVIDCTPEGIG---AKNLKMY--KEKGI-KAIFQGG 110 (171)
T ss_dssp SEEEECCSTTHH---HHHHHHH--HHTTC-EEEECTT
T ss_pred CEEEEccCCCCC---HHHHHHH--HHcCC-CEEEECC
Confidence 999999988531 1222222 23565 6666654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.77 E-value=0.0058 Score=47.57 Aligned_cols=68 Identities=16% Similarity=0.180 Sum_probs=48.4
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcC-----C---ce-eeccCc-cccCCCCEEEEccCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----G---IT-PSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~-----~---i~-~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
..++|||+|+|..++.++..|.+. | +|+++.|+.++.+.+... . .. ....+. ......|.||++.+.
T Consensus 17 ~~k~vlIlGaGG~arai~~aL~~~--~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~ 93 (177)
T d1nvta1 17 KDKNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 93 (177)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CCCEEEEECCcHHHHHHHHHHccc--c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence 457999999999999999999776 6 999999998776554210 0 01 111222 356789999998765
Q ss_pred C
Q 024417 153 S 153 (268)
Q Consensus 153 ~ 153 (268)
.
T Consensus 94 g 94 (177)
T d1nvta1 94 G 94 (177)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.74 E-value=0.0058 Score=52.04 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=31.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
++||+|+|+|.-|...|.+|.+. |++|+++.++.
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~--G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhC--CCCEEEEECCC
Confidence 68999999999999999999999 99999998864
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.73 E-value=0.0029 Score=48.35 Aligned_cols=63 Identities=13% Similarity=0.052 Sum_probs=44.0
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
||-++|.|.+|..+++.|++. |+.| ...|+.++...+...+. ......+.+.++|.++.+...
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~--g~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~ 64 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARR--FPTL-VWNRTFEKALRHQEEFG-SEAVPLERVAEARVIFTCLPT 64 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTT--SCEE-EECSSTHHHHHHHHHHC-CEECCGGGGGGCSEEEECCSS
T ss_pred eEEEEeHHHHHHHHHHHHHhC--CCEE-EEeCCHHHHHHHHHHcC-CcccccccccceeEEEecccc
Confidence 789999999999999999998 8876 46776655444332211 112233566788998877664
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.73 E-value=0.0074 Score=47.89 Aligned_cols=68 Identities=10% Similarity=0.053 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeecc----Cc-----c--ccCCCCEEEEccC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK----WT-----E--ATQKFPYVIFCAP 151 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~----D~-----~--~~~~~D~Vi~~a~ 151 (268)
..+|||.|+|.+|...+..++.. |. +|+++++++++.+..++.|.+.+.- |. + .-.++|++|.+.+
T Consensus 26 G~tVlV~GaG~vGl~a~~~ak~~--ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG 103 (195)
T d1kola2 26 GSTVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVG 103 (195)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHhh--cccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECcc
Confidence 35899999999998888888776 65 7889999888877777777766542 11 1 1347999999988
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 104 ~~ 105 (195)
T d1kola2 104 FE 105 (195)
T ss_dssp TT
T ss_pred cc
Confidence 43
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.73 E-value=0.0038 Score=48.07 Aligned_cols=68 Identities=12% Similarity=0.064 Sum_probs=44.6
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCeEEEEeCCCCcchhhhc-CCceeeccCcc-cc-CCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTE-AT-QKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~-L~~~L~~~~~G~~V~~~~R~~~~~~~l~~-~~i~~~~~D~~-~~-~~~D~Vi~~a~~~ 153 (268)
+||.|+|+|.+|+. ..+.|.+. ++.++.+.++++++...+.+ .++.....|.+ .+ .++|+|+.+.++.
T Consensus 2 irvgiiG~G~~~~~~~~~~l~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~ 73 (167)
T d1xeaa1 2 LKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD 73 (167)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceeccccccc
Confidence 48999999999976 45555443 57788888887666555433 34433334432 22 4789999877664
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=95.73 E-value=0.0048 Score=49.85 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
|+|+|+|+|.-|...+.+|.++ |++|+++.+++
T Consensus 1 m~V~IIGaG~aGL~aA~~L~~~--G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGGGISGLAVAHHLRSR--GTDAVLLESSA 33 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 5899999999999999999999 99999998864
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.66 E-value=0.008 Score=45.87 Aligned_cols=68 Identities=19% Similarity=0.166 Sum_probs=38.0
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcC-CCCeEEEEeCCCCcchhhhcCC--ceeeccCccccCCCCEEEEccCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQTMTADHHDELINMG--ITPSLKWTEATQKFPYVIFCAPPS 153 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~-~G~~V~~~~R~~~~~~~l~~~~--i~~~~~D~~~~~~~D~Vi~~a~~~ 153 (268)
||.|+|+ |++|..|++.|.++. |-.++..+..+......+.... ......+.....++|.++.+++..
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~ 74 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSS 74 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHH
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccCcc
Confidence 7999997 999999999886651 2335555543211111111111 111111223567889988877653
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=95.63 E-value=0.036 Score=43.09 Aligned_cols=71 Identities=10% Similarity=0.109 Sum_probs=42.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcC-CC----CeEEEEeCCCCc--chh----hhcC---Ccee-ec-cC-ccccCCCCEE
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEH-PG----CQIYGQTMTADH--HDE----LINM---GITP-SL-KW-TEATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~-~G----~~V~~~~R~~~~--~~~----l~~~---~i~~-~~-~D-~~~~~~~D~V 146 (268)
.||.|+|+ |.||.+++-.|.+.. -| .+++.++..... ... +... .... +. .| .+.++++|+|
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDvV 104 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDWA 104 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCceE
Confidence 47999997 999999999998640 01 245555554321 111 1111 1111 11 22 3689999999
Q ss_pred EEccCCCCC
Q 024417 147 IFCAPPSRS 155 (268)
Q Consensus 147 i~~a~~~~~ 155 (268)
|.+++....
T Consensus 105 vi~ag~~rk 113 (175)
T d7mdha1 105 LLIGAKPRG 113 (175)
T ss_dssp EECCCCCCC
T ss_pred EEeeccCCC
Confidence 999986543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.60 E-value=0.0075 Score=46.49 Aligned_cols=67 Identities=12% Similarity=0.100 Sum_probs=49.2
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeec-c--Cc-----c--ccCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL-K--WT-----E--ATQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~-~--D~-----~--~~~~~D~Vi~~a~~~ 153 (268)
.+|+|.|+|.+|...++.++.. |. .|++.++++++.+..++.+.+.+. . |. + .-.++|+||.+++..
T Consensus 34 ~~vli~GaG~vG~~~~~~a~~~--g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~~ 111 (172)
T d1h2ba2 34 AYVAIVGVGGLGHIAVQLLKVM--TPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQ 111 (172)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCH
T ss_pred CEEEEeCCChHHHHHHHHHHhh--cCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCcc
Confidence 5799999999999999999888 65 777888888777777666654332 1 11 1 235799999998863
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.58 E-value=0.0061 Score=47.22 Aligned_cols=67 Identities=10% Similarity=0.137 Sum_probs=48.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeE-EEEeCCCCcchhhhcCCceeec-c-C--c-c----c-cCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQI-YGQTMTADHHDELINMGITPSL-K-W--T-E----A-TQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V-~~~~R~~~~~~~l~~~~i~~~~-~-D--~-~----~-~~~~D~Vi~~a~~ 152 (268)
..+|+|+|+|.+|...++.++.. |.++ ++.++++++.+..++.|...+. . + . + . -.++|+||.|.+.
T Consensus 29 g~~VlI~G~G~iG~~~~~~ak~~--g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~ 106 (174)
T d1f8fa2 29 ASSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGS 106 (174)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCC
T ss_pred CCEEEEeCCCHHHhhhhhccccc--ccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCc
Confidence 35899999999999999999888 8754 5667777777766666654332 1 1 1 1 1 1368999999875
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=95.57 E-value=0.0093 Score=49.06 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.+||+|+|+|.-|...|.+|.++ |++|+++.+++
T Consensus 30 pkkV~IIGaG~aGLsaA~~L~~~--G~~V~vlE~~~ 63 (370)
T d2iida1 30 PKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASE 63 (370)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 46899999999999999999999 99999998764
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.54 E-value=0.0068 Score=48.83 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=30.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
|||+|+|+|.-|...+.+|.+. |++|+++.+++
T Consensus 2 KkV~IIGaG~aGL~aA~~La~~--G~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEG 34 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 6899999999999999999999 99999998754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.51 E-value=0.007 Score=46.45 Aligned_cols=66 Identities=18% Similarity=0.224 Sum_probs=49.9
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeec-c---Cc-c------ccCCCCEEEEccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSL-K---WT-E------ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~-~---D~-~------~~~~~D~Vi~~a~ 151 (268)
.+|+|+|+ |.+|...++.++.. | .+|++.++++++.+.+++.|.+... . |. + .-.++|+||.|++
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~--g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g 106 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAV--SGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 106 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEEeccccceeeeeeccccc--ccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence 58999996 99999999999988 7 5899999988887777776754432 1 21 1 1356999999887
Q ss_pred C
Q 024417 152 P 152 (268)
Q Consensus 152 ~ 152 (268)
.
T Consensus 107 ~ 107 (170)
T d1jvba2 107 S 107 (170)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.45 E-value=0.012 Score=43.28 Aligned_cols=91 Identities=14% Similarity=0.031 Sum_probs=54.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC-CCCcchhhhcCCceeeccCc-c--ccCCCCEEEEccCCCCCCChHH
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPSLKWT-E--ATQKFPYVIFCAPPSRSLDYPG 160 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R-~~~~~~~l~~~~i~~~~~D~-~--~~~~~D~Vi~~a~~~~~~~~~~ 160 (268)
.+|+|.|||.+|+.|++++..+ .+++++++.- ++.+... .-.|+.....|. + .-...+.++.+.+.. ..+
T Consensus 4 ~~v~I~GaG~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~G~-~I~Gi~V~~~~~l~~~~~~~i~iai~~i~~~----~~~ 77 (126)
T d2dt5a2 4 WGLCIVGMGRLGSALADYPGFG-ESFELRGFFDVDPEKVGR-PVRGGVIEHVDLLPQRVPGRIEIALLTVPRE----AAQ 77 (126)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC-SSEEEEEEEESCTTTTTC-EETTEEEEEGGGHHHHSTTTCCEEEECSCHH----HHH
T ss_pred ceEEEEcCCHHHHHHHHhHhhc-CCcEEEEEEeCchHhcCC-EECCEEEecHHHHHHHHhhcccEEEEeCCHH----HHH
Confidence 3799999999999999987654 4889887754 4433221 224665553332 1 223566666555432 233
Q ss_pred HHHHHHHHhcCCCeEEEEccCe
Q 024417 161 DVRLAALSWNGEGSFLFTSSSA 182 (268)
Q Consensus 161 ~~~~~~~~~~gvkr~V~~SS~~ 182 (268)
.+.+.+ .+.|++.+.-++...
T Consensus 78 ~I~d~l-~~~gIk~I~~f~~~~ 98 (126)
T d2dt5a2 78 KAADLL-VAAGIKGILNFAPVV 98 (126)
T ss_dssp HHHHHH-HHHTCCEEEECSSSC
T ss_pred HHHHHH-HHcCCCEEeecCcee
Confidence 333333 456888877766544
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.43 E-value=0.0063 Score=51.28 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=31.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
|.+|+|+|+|.-|..+|++|.+. |++|.++.+++
T Consensus 1 M~dv~IIGaG~sGl~~A~~L~~~--g~~V~iiEk~~ 34 (298)
T d1i8ta1 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRN 34 (298)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSS
T ss_pred CccEEEECCcHHHHHHHHHHHhC--CCcEEEEECCC
Confidence 66899999999999999999999 99999998864
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.37 E-value=0.015 Score=46.88 Aligned_cols=36 Identities=22% Similarity=0.323 Sum_probs=32.5
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
..++|+|+|+|+-|...+.+|.++ |++|+.+.++.+
T Consensus 48 ~~k~VvIIGaGpAGl~aA~~l~~~--G~~v~l~E~~~~ 83 (233)
T d1djqa3 48 NKDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEK 83 (233)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CCceEEEEcccHHHHHHHHHHHHh--ccceeeEeeccc
Confidence 457999999999999999999999 999999988653
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.32 E-value=0.025 Score=42.94 Aligned_cols=68 Identities=13% Similarity=0.065 Sum_probs=41.8
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCC-------eEEEEeCCCCc--chhh----hcC---Cce-eec--cCccccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HDEL----INM---GIT-PSL--KWTEATQKFP 144 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~-------~V~~~~R~~~~--~~~l----~~~---~i~-~~~--~D~~~~~~~D 144 (268)
+||.|+|| |.+|.+++-.|... +. ++...+.+... .+.+ ... ... ... .+.+.++++|
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~--~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 81 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred eEEEEECCCCHHHHHHHHHHHHH--HhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence 59999996 99999999999764 31 34455543321 1111 111 111 111 2236899999
Q ss_pred EEEEccCCCC
Q 024417 145 YVIFCAPPSR 154 (268)
Q Consensus 145 ~Vi~~a~~~~ 154 (268)
+||.+++...
T Consensus 82 vVVitag~~~ 91 (154)
T d5mdha1 82 VAILVGSMPR 91 (154)
T ss_dssp EEEECCSCCC
T ss_pred EEEEecccCC
Confidence 9999998543
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.27 E-value=0.011 Score=50.28 Aligned_cols=38 Identities=18% Similarity=0.123 Sum_probs=32.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
.||||+|+|+|.-|...+..|+++..+++|+++.|+..
T Consensus 3 ~~KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 37899999999999999999988722369999998753
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=95.16 E-value=0.0078 Score=46.36 Aligned_cols=70 Identities=11% Similarity=0.084 Sum_probs=44.2
Q ss_pred CeEEEEcccHHHHHHHHH-HHhc---CCCCeEEEEeCCCCcchhhh-------cCCceeec--cCccccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQ-WRQE---HPGCQIYGQTMTADHHDELI-------NMGITPSL--KWTEATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~-L~~~---~~G~~V~~~~R~~~~~~~l~-------~~~i~~~~--~D~~~~~~~D~Vi~~a~ 151 (268)
|||.|+|+|-+|...+-. |+.. .+..++..+|.++++..... ....+... .+.+.++++|+||.+++
T Consensus 1 mKIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~ 80 (162)
T d1up7a1 1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR 80 (162)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence 589999998787665532 3221 12458999999876643211 11222221 22368999999999998
Q ss_pred CCC
Q 024417 152 PSR 154 (268)
Q Consensus 152 ~~~ 154 (268)
..+
T Consensus 81 ~~~ 83 (162)
T d1up7a1 81 PGG 83 (162)
T ss_dssp TTH
T ss_pred cCC
Confidence 753
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=95.15 E-value=0.011 Score=46.26 Aligned_cols=33 Identities=21% Similarity=0.360 Sum_probs=29.9
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~ 119 (268)
+||+|+|+|.-|...|.+|.++ |+ +|+++.+++
T Consensus 1 P~V~IIGaG~aGL~aA~~L~~~--G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVGAGMSGISAAKRLSEA--GITDLLILEATD 34 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHHT--TCCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhC--CCCcEEEEECCC
Confidence 4899999999999999999999 96 799998864
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=95.09 E-value=0.0099 Score=49.39 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=29.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~ 119 (268)
++|+|+|+|.+|..++.+|.++ |+ +|++++|+.
T Consensus 2 ~dViIIGaGi~G~s~A~~La~~--G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGAGIVGTNLADELVTR--GWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHc--CCCcEEEEeCCC
Confidence 4899999999999999999999 86 799999864
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=95.04 E-value=0.031 Score=42.71 Aligned_cols=67 Identities=13% Similarity=0.239 Sum_probs=50.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCCcchhhhcCCceeecc----Cc--c------ccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK----WT--E------ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~~~~~l~~~~i~~~~~----D~--~------~~~~~D~Vi~~a~ 151 (268)
.+|+|+|+|-+|...+..+... |. +|+++++++++.+..++.|.+.++- |. + .-.++|+|+.+.+
T Consensus 30 ~~VlI~G~Gg~g~~~~~~~~~~--g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G 107 (175)
T d1cdoa2 30 STCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 107 (175)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CEEEEEecCCccchHHHHHHHH--hhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecC
Confidence 4799999998999988888877 54 7999999988888777777654431 11 1 2358999999988
Q ss_pred CC
Q 024417 152 PS 153 (268)
Q Consensus 152 ~~ 153 (268)
..
T Consensus 108 ~~ 109 (175)
T d1cdoa2 108 NV 109 (175)
T ss_dssp CH
T ss_pred CH
Confidence 63
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=94.66 E-value=0.067 Score=39.35 Aligned_cols=70 Identities=16% Similarity=0.155 Sum_probs=47.0
Q ss_pred CCCCCeEEEEccc-----------HHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeecc--Ccc------ccC
Q 024417 81 GVGENDLLIVGPG-----------VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WTE------ATQ 141 (268)
Q Consensus 81 ~~~m~kVLI~GaG-----------~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~--D~~------~~~ 141 (268)
....+||||+|+| |-+.+.+++|+++ |++++.+.-+++-...-.....+.+.. ..+ ..+
T Consensus 4 ~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TVstd~d~aD~lYfePlt~e~v~~Ii~~E 81 (127)
T d1a9xa3 4 RTDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKE 81 (127)
T ss_dssp CSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCGGGCGGGSSEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhhhcChhhcceeeeecCCHHHHHHHHHHh
Confidence 3445799999886 7789999999999 999999998887654322222222211 111 346
Q ss_pred CCCEEEEccCC
Q 024417 142 KFPYVIFCAPP 152 (268)
Q Consensus 142 ~~D~Vi~~a~~ 152 (268)
++|.|+-..+-
T Consensus 82 ~pd~il~~~GG 92 (127)
T d1a9xa3 82 RPDAVLPTMGG 92 (127)
T ss_dssp CCSEEECSSSH
T ss_pred CcCCeEEEeee
Confidence 88888865553
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.63 E-value=0.016 Score=44.98 Aligned_cols=32 Identities=13% Similarity=0.348 Sum_probs=30.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|.-|...|.+|.++ |++|.++.+++
T Consensus 7 DviViGaG~~Gl~~A~~La~~--G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVD--GKKVLHIDKQD 38 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEcCCC
Confidence 489999999999999999999 99999999875
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.58 E-value=0.021 Score=42.89 Aligned_cols=33 Identities=18% Similarity=0.365 Sum_probs=30.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R 117 (268)
..++|||+|.|.+|..-++.|++. |.+|++++.
T Consensus 12 ~gkrvLViGgG~va~~ka~~Ll~~--GA~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGGGEVGLTRLYKLMPT--GCKLTLVSP 44 (150)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGG--TCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeC
Confidence 357999999999999999999999 999999864
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.58 E-value=0.014 Score=44.56 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=27.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
++|+|+|+|++|-.++..|.+. |.+|+.+.+.
T Consensus 4 ~~VvIIGgG~~G~e~A~~l~~~--g~~v~v~~~~ 35 (185)
T d1q1ra1 4 DNVVIVGTGLAGVEVAFGLRAS--GWEGNIRLVG 35 (185)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEEC
T ss_pred CCEEEECCcHHHHHHHHHHHHc--CCceEEEEec
Confidence 5899999999999999999999 8887766543
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.51 E-value=0.0028 Score=50.61 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=23.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeE
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQI 112 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V 112 (268)
|||+|+|+|.+|...|.+|.++ |++|
T Consensus 1 mkV~VIGaGi~GlstA~~L~~~--G~~v 26 (246)
T d1kifa1 1 MRVVVIGAGVIGLSTALCIHER--YHSV 26 (246)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--HTTT
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCc
Confidence 5899999999999999999999 8754
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=94.46 E-value=0.17 Score=41.56 Aligned_cols=32 Identities=13% Similarity=0.127 Sum_probs=29.0
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~ 116 (268)
..++|+|-|.|-+|+++++.|.+. |..|++++
T Consensus 35 ~g~~v~IQGfGnVG~~~a~~L~e~--Gakvvavs 66 (255)
T d1bgva1 35 VGKTVALAGFGNVAWGAAKKLAEL--GAKAVTLS 66 (255)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHH--TCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCeEEEEe
Confidence 356899999999999999999999 99999875
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.33 E-value=0.027 Score=45.60 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=30.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
..||+|+|+|.=|...|.+|.++ |++|+++-.+.
T Consensus 5 ~~kViVIGaG~aGL~aA~~L~~~--G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARD 38 (449)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 45899999999999999999999 99999997653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.32 E-value=0.025 Score=45.47 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=30.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~~ 120 (268)
++|+|+|+|.-|..++..|.+. |. +|+++.|.++
T Consensus 2 ~~V~IvGaG~aGl~~A~~L~~~--Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGAGIGGLSCALALHQA--GIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCeEEEEeCCCC
Confidence 5899999999999999999999 95 8999998754
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=94.30 E-value=0.021 Score=46.62 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.8
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|..|..++.+|.++ |++|+++++..
T Consensus 5 DvvIIGaGi~Gls~A~~La~~--G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 599999999999999999999 99999999853
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=94.27 E-value=0.024 Score=42.63 Aligned_cols=30 Identities=23% Similarity=0.243 Sum_probs=26.8
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
||+|+|+|++|-.++..|. + +.+|+.+.+.
T Consensus 2 rVvIIGgG~~G~e~A~~l~-~--~~~Vtvv~~~ 31 (167)
T d1xhca1 2 KVVIVGNGPGGFELAKQLS-Q--TYEVTVIDKE 31 (167)
T ss_dssp EEEEECCSHHHHHHHHHHT-T--TSEEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHH-c--CCCEEEEecc
Confidence 8999999999999999995 4 6799999875
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.12 E-value=0.013 Score=45.10 Aligned_cols=30 Identities=20% Similarity=0.294 Sum_probs=25.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~ 116 (268)
.+|+|+|+|++|-.++..|++. |.+|..+.
T Consensus 4 a~VvIIGgG~~G~e~A~~l~~~--g~~v~i~~ 33 (183)
T d1d7ya1 4 APVVVLGAGLASVSFVAELRQA--GYQGLITV 33 (183)
T ss_dssp SSEEEECCSHHHHHHHHHHHHH--TCCSCEEE
T ss_pred CCEEEECccHHHHHHHHHHHhc--CCceEEEE
Confidence 4799999999999999999998 77655543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=93.98 E-value=0.068 Score=39.26 Aligned_cols=51 Identities=20% Similarity=0.285 Sum_probs=38.3
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
|||.|.|+ |-.|+.+++.+.++ ++++.+. +++. .+.+.++|+||....|..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id~~~-----------------~~~~~~~DVvIDFS~p~~ 53 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVDVNG-----------------VEELDSPDVVIDFSSPEA 53 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEETTE-----------------EEECSCCSEEEECSCGGG
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEECCCc-----------------HHHhccCCEEEEecCHHH
Confidence 58999997 99999999988888 9988754 2211 124567899998777653
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.93 E-value=0.034 Score=44.12 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=31.3
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
+||.|+|+|.-|...|.+|++...|++|+++++.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 589999999999999999987645899999988754
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=93.87 E-value=0.028 Score=47.31 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=30.7
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
+|+|+|+|+-|..++.+|+++ |.+|+++.++++
T Consensus 9 dV~IIGAG~sGl~~a~~L~~~--G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 9 DVLVVGAGFSGLYALYRLREL--GRSVHVIETAGD 41 (298)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CEEEECccHHHHHHHHHHHhC--CCCEEEEEcCCC
Confidence 699999999999999999999 999999998754
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.81 E-value=0.027 Score=43.64 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=44.8
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhh-cCCce---eeccCcc-c--cCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI-NMGIT---PSLKWTE-A--TQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~-~~~i~---~~~~D~~-~--~~~~D~Vi~~a~~~ 153 (268)
.||.|+|+|.+|+..++.|... ++.+|+++ ++++++.+.+. ..++. .+..|.+ . -.++|+|+.+.++.
T Consensus 2 iki~iIG~G~~g~~~~~~l~~~-~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~~ 77 (184)
T d1ydwa1 2 IRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 77 (184)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-CCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccch
Confidence 4899999999999999988764 57898866 56655544432 22321 1223443 2 36899999876654
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.67 E-value=0.041 Score=39.46 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=28.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcC-CCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEH-PGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~-~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|-.++..|.+.. .|.+|+.+.|.+.
T Consensus 21 ~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 21 RRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 58999999999999997665430 1678999988653
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=93.67 E-value=0.038 Score=42.70 Aligned_cols=69 Identities=20% Similarity=0.158 Sum_probs=43.0
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCCCeEEEE-eCCCCcchhhhc-CCceeeccCcc-c--cCCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITPSLKWTE-A--TQKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~~-L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~-~~i~~~~~D~~-~--~~~~D~Vi~~a~~~ 153 (268)
.||.|+|+|.+|+. .++.+.+.....+|.++ ++++++.+.+.. .+......|.+ . -.++|+|+.+.++.
T Consensus 4 irigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~tp~~ 78 (181)
T d1zh8a1 4 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 78 (181)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeecccccc
Confidence 37899999999987 46777664113577765 566555544322 34443344543 2 35799999877654
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=93.66 E-value=0.13 Score=41.42 Aligned_cols=57 Identities=14% Similarity=0.064 Sum_probs=39.8
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccC----c-----cccCCCCEEEEccCCC
Q 024417 92 PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW----T-----EATQKFPYVIFCAPPS 153 (268)
Q Consensus 92 aG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D----~-----~~~~~~D~Vi~~a~~~ 153 (268)
.|..|..|++++..+ |++|+.+.-..... ...+++.+... . +.+.++|++|++|+..
T Consensus 31 SGk~G~aiA~~~~~~--Ga~V~li~g~~~~~---~p~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvs 96 (223)
T d1u7za_ 31 SGKMGFAIAAAAARR--GANVTLVSGPVSLP---TPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVA 96 (223)
T ss_dssp CSHHHHHHHHHHHHT--TCEEEEEECSCCCC---CCTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCC
T ss_pred cHHHHHHHHHHHHHc--CCchhhhhcccccC---cccccccceehhhHHHHHHHHhhhccceeEeeeechh
Confidence 399999999999999 99999987643321 11234433221 1 2467999999999864
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.62 E-value=0.044 Score=40.49 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=28.8
Q ss_pred CeEEEEcccHHHHHHHHHHH----hcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWR----QEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~----~~~~G~~V~~~~R~~~ 120 (268)
++|+|+|+|++|-.++..|. +. |.+|+.+.+.+.
T Consensus 38 k~i~IvGgG~~G~E~A~~l~~~~~~~--g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 38 KSITIIGGGFLGSELACALGRKARAL--GTEVIQLFPEKG 75 (137)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHhc--CCEEEEeccccc
Confidence 58999999999999998884 45 899999988643
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=93.43 E-value=0.049 Score=38.94 Aligned_cols=36 Identities=19% Similarity=0.078 Sum_probs=28.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhc-CCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQE-HPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~-~~G~~V~~~~R~~~ 120 (268)
++++|+|+|++|-.++..|.+. ..|.+|+.+.|.+.
T Consensus 19 ~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 19 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence 5899999999999999765432 12889999998654
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.42 E-value=0.056 Score=40.47 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=29.5
Q ss_pred CeEEEE--cccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIV--GPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~--GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
+.++|+ |.||||..++..|.+. |++|+.+.+.+.
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~--G~~Vtlv~~~~~ 75 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVHL 75 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSCT
T ss_pred CceEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCc
Confidence 456666 7899999999999999 999999998753
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.31 E-value=0.32 Score=35.82 Aligned_cols=54 Identities=15% Similarity=0.161 Sum_probs=37.7
Q ss_pred eEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCC
Q 024417 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (268)
Q Consensus 86 kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~ 154 (268)
||.|.|+ |-.|+.+++.+.+. +++++.+. ++. +....+ ...++|+||....|..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~-~~~~l~~~~d~~-~~~~~~-------------~~~~~DvvIDFS~p~~ 56 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA-DDLTLSAELDAG-DPLSLL-------------TDGNTEVVIDFTHPDV 56 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-TTSEEEEEECTT-CCTHHH-------------HTTTCSEEEECCCTTT
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecC-Cchhhh-------------ccccCCEEEEcccHHH
Confidence 6899997 99999999988775 47888754 332 111111 2357899998887754
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.12 E-value=0.16 Score=36.82 Aligned_cols=38 Identities=11% Similarity=0.219 Sum_probs=33.0
Q ss_pred CCeEEEEccc-----------HHHHHHHHHHHhcCCCCeEEEEeCCCCcch
Q 024417 84 ENDLLIVGPG-----------VLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (268)
Q Consensus 84 m~kVLI~GaG-----------~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~ 123 (268)
.+||||+|+| |-+.+.++.|+++ |++++.+.-+|+-..
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVs 52 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVS 52 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSST
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhh
Confidence 5799999986 7889999999999 999999988887654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=92.79 E-value=0.046 Score=42.15 Aligned_cols=70 Identities=11% Similarity=0.040 Sum_probs=44.6
Q ss_pred CeEEEEcccHHHHH-HHHHHHhcCCC---CeEEEEeCCCCcchhh----h----cCC--ceee-ccCc-cccCCCCEEEE
Q 024417 85 NDLLIVGPGVLGRL-VAEQWRQEHPG---CQIYGQTMTADHHDEL----I----NMG--ITPS-LKWT-EATQKFPYVIF 148 (268)
Q Consensus 85 ~kVLI~GaG~IG~~-L~~~L~~~~~G---~~V~~~~R~~~~~~~l----~----~~~--i~~~-~~D~-~~~~~~D~Vi~ 148 (268)
.||.|+|+|.+|.. ++..|+...+. -+|..+|.++++.+.. . ..+ .+.. ..|. ++++++|+||.
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vvi 83 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMA 83 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEE
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEEE
Confidence 48999999888765 33444433222 3899999987765421 1 111 2222 2354 68999999999
Q ss_pred ccCCCC
Q 024417 149 CAPPSR 154 (268)
Q Consensus 149 ~a~~~~ 154 (268)
+++...
T Consensus 84 tag~~~ 89 (167)
T d1u8xx1 84 HIRVGK 89 (167)
T ss_dssp CCCTTH
T ss_pred CCCcCC
Confidence 998854
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.67 E-value=0.058 Score=44.38 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.3
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|.-|...+.+|.++ |++|+++.++.
T Consensus 1 DViVIGaG~aGL~aA~~L~~~--G~~V~VlE~~~ 32 (383)
T d2v5za1 1 DVVVVGGGISGMAAAKLLHDS--GLNVVVLEARD 32 (383)
T ss_dssp SEEEECCBHHHHHHHHHHHHT--TCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 389999999999999999999 99999998754
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=92.66 E-value=0.083 Score=42.70 Aligned_cols=33 Identities=24% Similarity=0.357 Sum_probs=29.2
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~ 118 (268)
..+|+|+|+|-+|++++..|... |. +++.+|.+
T Consensus 30 ~~~VliiG~GglGs~va~~La~~--Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHc--CCCeEEEECCc
Confidence 46899999999999999999999 98 77787754
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.58 E-value=0.075 Score=40.92 Aligned_cols=71 Identities=11% Similarity=0.100 Sum_probs=44.9
Q ss_pred CCeEEEEcccHHHHH--HHHHHHh-c-CCCCeEEEEeCCCCcchhhh--------cC--Cceeec-cCc-cccCCCCEEE
Q 024417 84 ENDLLIVGPGVLGRL--VAEQWRQ-E-HPGCQIYGQTMTADHHDELI--------NM--GITPSL-KWT-EATQKFPYVI 147 (268)
Q Consensus 84 m~kVLI~GaG~IG~~--L~~~L~~-~-~~G~~V~~~~R~~~~~~~l~--------~~--~i~~~~-~D~-~~~~~~D~Vi 147 (268)
.+||.|+|+|.+|.. ++..|+. + .++.++..+|.++++.+... .. ..+... .|. +++.++|+|+
T Consensus 2 ~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv 81 (171)
T d1obba1 2 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVI 81 (171)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEE
T ss_pred CcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEe
Confidence 369999999999865 3333332 2 12469999999876643211 11 222222 243 5889999999
Q ss_pred EccCCCC
Q 024417 148 FCAPPSR 154 (268)
Q Consensus 148 ~~a~~~~ 154 (268)
.++....
T Consensus 82 ~~~~~g~ 88 (171)
T d1obba1 82 NTAMVGG 88 (171)
T ss_dssp ECCCTTH
T ss_pred eeccccc
Confidence 9987754
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.45 E-value=0.38 Score=34.33 Aligned_cols=81 Identities=16% Similarity=0.254 Sum_probs=51.6
Q ss_pred CeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCCCCCCChHH
Q 024417 85 NDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPG 160 (268)
Q Consensus 85 ~kVLI~Ga----G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~~~~~~~~~ 160 (268)
|+|.|+|+ |-.|..+.+.|++. |++|+.+..+.+.. .|...+..-.+.-..+|.++.+.++... .+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~~~~i-----~G~~~y~sl~~lp~~~D~vvi~vp~~~~---~~ 71 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPPKVG---LQ 71 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCHHHH---HH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccccccc-----cCccccccchhccccceEEEEEeCHHHH---HH
Confidence 57899993 78999999999999 99998875432221 2444442112344578999988776431 22
Q ss_pred HHHHHHHHhcCCCeEEE
Q 024417 161 DVRLAALSWNGEGSFLF 177 (268)
Q Consensus 161 ~~~~~~~~~~gvkr~V~ 177 (268)
.++.+ .+.|++.+++
T Consensus 72 ~l~~~--~~~g~k~v~~ 86 (116)
T d1y81a1 72 VAKEA--VEAGFKKLWF 86 (116)
T ss_dssp HHHHH--HHTTCCEEEE
T ss_pred HHHHH--HhcCCceEEe
Confidence 23333 3567887654
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.42 E-value=0.11 Score=44.03 Aligned_cols=67 Identities=13% Similarity=0.189 Sum_probs=49.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hcCCceeeccCccccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMGITPSLKWTEATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~~~i~~~~~D~~~~~~~D~Vi~~a~ 151 (268)
+++.|+|+|..++.-++.|....|=.+|++.+|++++.+.+ ...++.....+.+++.++|+|+-+-+
T Consensus 126 ~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~ 196 (320)
T d1omoa_ 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTP 196 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCC
T ss_pred cEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEecc
Confidence 57899999999999999998865556899999987765443 23344444444467889999986644
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=92.21 E-value=0.082 Score=42.05 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=30.6
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
.|+|+|+|..|...+..|.++ |++|.++.+++.
T Consensus 4 DViIIGaG~aGl~aA~~la~~--G~~V~liEk~~~ 36 (251)
T d2i0za1 4 DVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNK 36 (251)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence 699999999999999999999 999999998754
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=92.19 E-value=0.063 Score=44.65 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=29.2
Q ss_pred eEEEEcccHHHHHHHHHHH-----hcCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWR-----QEHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~-----~~~~G~~V~~~~R~~~ 120 (268)
.|+|+|+|..|..++..|. .+ |++|+++.|.+.
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~--G~~v~vlEr~~~ 46 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKP--DLKVRIIDKRST 46 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHST--TCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccC--CCcEEEEcCCCC
Confidence 6999999999999999996 45 999999998754
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=92.18 E-value=0.46 Score=34.49 Aligned_cols=86 Identities=10% Similarity=0.198 Sum_probs=55.6
Q ss_pred CCCCeEEEEcc----cHHHHHHHHHHHhcCCC-CeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCC
Q 024417 82 VGENDLLIVGP----GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRS 155 (268)
Q Consensus 82 ~~m~kVLI~Ga----G~IG~~L~~~L~~~~~G-~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~ 155 (268)
++.++|.|+|+ |..|..+.+.|++. | .+|+.+-.+.+.. .|...+. +. +.-..+|.++.+.++..
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~--~~g~v~pVnP~~~~i-----~G~~~y~-sl~dlp~~vDlvvi~vp~~~- 76 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEY--KKGKVYPVNIKEEEV-----QGVKAYK-SVKDIPDEIDLAIIVVPKRF- 76 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTC--CSSEEEEECSSCSEE-----TTEECBS-STTSCSSCCSEEEECSCHHH-
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHc--CCCcEEEeccCcccc-----CCeEeec-chhhcCCCCceEEEecChHH-
Confidence 44578999994 89999999999876 5 6898876543222 2444332 22 33457899998876542
Q ss_pred CChHHHHHHHHHHhcCCCeEEEEcc
Q 024417 156 LDYPGDVRLAALSWNGEGSFLFTSS 180 (268)
Q Consensus 156 ~~~~~~~~~~~~~~~gvkr~V~~SS 180 (268)
..+.++.+ .+.|++.++.+|+
T Consensus 77 --~~~~~~~~--~~~g~~~~vi~s~ 97 (129)
T d2csua1 77 --VKDTLIQC--GEKGVKGVVIITA 97 (129)
T ss_dssp --HHHHHHHH--HHHTCCEEEECCC
T ss_pred --hHHHHHHH--HHcCCCEEEEecc
Confidence 12222322 4568998888875
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.07 E-value=0.12 Score=40.10 Aligned_cols=66 Identities=15% Similarity=0.169 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc-chhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~-~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
.++|.|+|.|--|+.=+.-|++. |.+|++--|...+ .+..+..|+++... .|+.+.+|+|..+.+.
T Consensus 16 ~k~IaViGYGsQG~AhAlNLrDS--G~~V~VGLr~gs~s~~~A~~~Gf~v~~~-~eA~~~aDiim~L~PD 82 (182)
T d1np3a2 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAHGLKVADV-KTAVAAADVVMILTPD 82 (182)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHTTCEEECH-HHHHHTCSEEEECSCH
T ss_pred CCEEEEEeeCcHhHHHHhhhhhc--CCCEEEEcCCCCccHHHHhhhccccccH-HHHhhhcCeeeeecch
Confidence 57899999999999999999999 9999988886543 33445567765422 1588999999988773
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=92.03 E-value=0.072 Score=40.77 Aligned_cols=67 Identities=21% Similarity=0.247 Sum_probs=41.6
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEE-eCCCCcc-----hhhh---cCCceeeccCc-cccCCCCEEEEccCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHH-----DELI---NMGITPSLKWT-EATQKFPYVIFCAPP 152 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~-~R~~~~~-----~~l~---~~~i~~~~~D~-~~~~~~D~Vi~~a~~ 152 (268)
.+||.|.|+ |.+|+.+++.+.+. ++.++.+. +|..... ..+. ..++.. ..|. +..+.+|+||....|
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~-~~~~~~~~~~~DViIDFs~p 81 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV-QSSLDAVKDDFDVFIDFTRP 81 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE-ESCSTTTTTSCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecccchhccchhhhhhccccCCcee-eccHHHHhcccceEEEeccH
Confidence 358999997 99999999998875 37787754 4432211 1111 112222 2233 367789999976555
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.72 E-value=0.25 Score=38.01 Aligned_cols=39 Identities=10% Similarity=0.193 Sum_probs=33.0
Q ss_pred CCCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 82 ~~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
...++|+|+|. ..+|+.|+..|.++ |..|+.........
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~t~~l 76 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSKTAHL 76 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTCSSH
T ss_pred cccceEEEEecCCccchHHHHHHHhc--cCceEEEecccccH
Confidence 34679999997 78899999999999 99999988765543
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=91.55 E-value=0.13 Score=39.57 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=40.2
Q ss_pred CCCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCccccCCCCEEEEccCC
Q 024417 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (268)
Q Consensus 83 ~m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~~~~~~~D~Vi~~a~~ 152 (268)
..++|+|+|- ..+|+.|+..|.++ |..|+.......+... .+.++|+||.+++.
T Consensus 36 ~GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~~l~~--------------~~~~ADivI~a~G~ 90 (166)
T d1b0aa1 36 FGLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTKNLRH--------------HVENADLLIVAVGK 90 (166)
T ss_dssp TTCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCSCHHH--------------HHHHCSEEEECSCC
T ss_pred ccceEEEEeccccccHHHHHHHHHh--hccccccccccchhHH--------------HHhhhhHhhhhccC
Confidence 3579999996 78999999999999 9999988765544322 34456666666664
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=91.37 E-value=0.27 Score=39.88 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=29.8
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R 117 (268)
..++|+|=|.|.+|+++++.|.+. |..|++++-
T Consensus 30 ~g~~v~IqGfGnVG~~~a~~L~~~--Gakvv~vsD 62 (242)
T d1v9la1 30 EGKTVAIQGMGNVGRWTAYWLEKM--GAKVIAVSD 62 (242)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCeEEEeec
Confidence 357999999999999999999999 999998764
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.14 E-value=0.65 Score=34.16 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=52.5
Q ss_pred CCeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCCCh
Q 024417 84 ENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLDY 158 (268)
Q Consensus 84 m~kVLI~Ga----G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~~ 158 (268)
.++|.|+|+ +-.|..+++.|++. |++|+.+-...+. + .|...+ -+. +.-..+|.|+.+.++...
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~~~~---i--~G~~~~-~sl~dlp~~iD~v~i~vp~~~~--- 87 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKYEE---V--LGRKCY-PSVLDIPDKIEVVDLFVKPKLT--- 87 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSE---E--TTEECB-SSGGGCSSCCSEEEECSCHHHH---
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCcccc---c--CCCccc-ccccccCccceEEEEEeCHHHH---
Confidence 468999994 78999999999999 9999887543221 1 244333 233 344578999988776431
Q ss_pred HHHHHHHHHHhcCCCeEEEE
Q 024417 159 PGDVRLAALSWNGEGSFLFT 178 (268)
Q Consensus 159 ~~~~~~~~~~~~gvkr~V~~ 178 (268)
.+.++.+ .+.|++.+++.
T Consensus 88 ~~~~~e~--~~~g~k~v~~~ 105 (139)
T d2d59a1 88 MEYVEQA--IKKGAKVVWFQ 105 (139)
T ss_dssp HHHHHHH--HHHTCSEEEEC
T ss_pred HHHHHHH--HHhCCCEEEEe
Confidence 2222333 24578776653
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.46 E-value=0.052 Score=42.19 Aligned_cols=92 Identities=15% Similarity=0.208 Sum_probs=52.4
Q ss_pred CeEEEEcc-cHHHHHHHHHHHhcCCCCe-EEEEeCCCCcchhhh-cCCceeec--cC--c-c-----ccCCCCEEEEccC
Q 024417 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELI-NMGITPSL--KW--T-E-----ATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~Ga-G~IG~~L~~~L~~~~~G~~-V~~~~R~~~~~~~l~-~~~i~~~~--~D--~-~-----~~~~~D~Vi~~a~ 151 (268)
.+|||.|+ |-+|...++..+.. |.+ |+++++++++...+. ..+.+.+. .+ . + .-+++|+|+.+.+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~--Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG 109 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLL--GCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG 109 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHT--TCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEECCCchhhHHHHHHHHHc--CCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence 47999996 99999999999888 876 445566555544443 34544432 11 1 1 2357999999886
Q ss_pred CCCCCChHHHHHHHHHHhcCCCeEEEEccCeeec
Q 024417 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYD 185 (268)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~gvkr~V~~SS~~vYg 185 (268)
.. .+...+.....-.++|.++.++-|.
T Consensus 110 g~-------~~~~~~~~l~~~G~iv~~G~~s~~~ 136 (187)
T d1vj1a2 110 GD-------ISNTVISQMNENSHIILCGQISQYN 136 (187)
T ss_dssp HH-------HHHHHHTTEEEEEEEEEC-------
T ss_pred ch-------hHHHHhhhccccccEEEeccccccc
Confidence 31 2233321222335788777665543
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=90.45 E-value=0.14 Score=41.08 Aligned_cols=71 Identities=13% Similarity=0.084 Sum_probs=49.2
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcC----CCCeEEEEeCCC-CcchhhhcCCceeecc---Cc-cccCCCCEEEEccCCC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEH----PGCQIYGQTMTA-DHHDELINMGITPSLK---WT-EATQKFPYVIFCAPPS 153 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~----~G~~V~~~~R~~-~~~~~l~~~~i~~~~~---D~-~~~~~~D~Vi~~a~~~ 153 (268)
+||+|.|+|.|-.|+.=+.-|++.. .|..|++--|.. ...+..+..|.+.... +. |+.+.+|+|..+.+..
T Consensus 43 g~KkIaViGYGsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlPDe 122 (226)
T d1qmga2 43 GIKQIGVIGWGSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLISDS 122 (226)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSCHH
T ss_pred CCCEEEEEEeccHHHHHHHhChhhcccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecchH
Confidence 4689999999999999999999950 045576655543 3344445567653322 22 5788999999887753
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=90.44 E-value=0.13 Score=41.25 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~ 121 (268)
.+|+|+|+|.-|...+.+|.++ |++|.++.+++..
T Consensus 5 ~DViIIGaG~aGl~aA~~la~~--G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 5 SENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKI 39 (253)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 3699999999999999999999 9999999997643
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=90.34 E-value=0.39 Score=40.05 Aligned_cols=33 Identities=15% Similarity=0.212 Sum_probs=29.7
Q ss_pred CCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC
Q 024417 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R 117 (268)
..++|+|-|.|.+|+++++.|.+. |..|++++-
T Consensus 35 ~gktvaIqGfGnVG~~~A~~L~e~--Gakvv~vsD 67 (293)
T d1hwxa1 35 GDKTFAVQGFGNVGLHSMRYLHRF--GAKCVAVGE 67 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEEc
Confidence 357899999999999999999999 999998763
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.98 E-value=0.17 Score=38.73 Aligned_cols=70 Identities=14% Similarity=0.102 Sum_probs=41.5
Q ss_pred CeEEEEcccHHH--HHHHHHHHhcC--CCCeEEEEeCCCCc--chhhh--------cCCceee--c-cCc-cccCCCCEE
Q 024417 85 NDLLIVGPGVLG--RLVAEQWRQEH--PGCQIYGQTMTADH--HDELI--------NMGITPS--L-KWT-EATQKFPYV 146 (268)
Q Consensus 85 ~kVLI~GaG~IG--~~L~~~L~~~~--~G~~V~~~~R~~~~--~~~l~--------~~~i~~~--~-~D~-~~~~~~D~V 146 (268)
+||.|+|+|-+| ..++..++... +.-++..++.++++ .+.+. ..+.... . .|. ++++++|+|
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDvV 81 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADFV 81 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCEE
Confidence 589999998554 44444444431 01388888987653 22111 1122221 1 233 578999999
Q ss_pred EEccCCCC
Q 024417 147 IFCAPPSR 154 (268)
Q Consensus 147 i~~a~~~~ 154 (268)
|.+++...
T Consensus 82 v~ta~~~~ 89 (169)
T d1s6ya1 82 TTQFRVGG 89 (169)
T ss_dssp EECCCTTH
T ss_pred EEccccCC
Confidence 99998764
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=89.81 E-value=0.14 Score=43.15 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=29.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.|+|+|+|+-|..+|.+|.++ |++|.++.+.
T Consensus 4 ~VIVVGsG~aG~v~A~rLaea--G~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEA--GVQTLMLEMG 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred eEEEeCcCHHHHHHHHHHHHC--cCeEEEEecC
Confidence 589999999999999999999 9999999985
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=89.73 E-value=0.35 Score=38.32 Aligned_cols=68 Identities=18% Similarity=0.175 Sum_probs=42.9
Q ss_pred CeEEEEcccHHHH-HHHHHHHhcCCCCeEEEE-eCCCCcchhhh-cCCcee---e-ccCcc-cc--CCCCEEEEccCCC
Q 024417 85 NDLLIVGPGVLGR-LVAEQWRQEHPGCQIYGQ-TMTADHHDELI-NMGITP---S-LKWTE-AT--QKFPYVIFCAPPS 153 (268)
Q Consensus 85 ~kVLI~GaG~IG~-~L~~~L~~~~~G~~V~~~-~R~~~~~~~l~-~~~i~~---~-~~D~~-~~--~~~D~Vi~~a~~~ 153 (268)
-+|.|+|+|.+|+ ++++.+... ++.+|+++ +|++++.+.+. ..+++. . ..|.+ .+ .++|+|+.+.++.
T Consensus 34 iriaiIG~G~~~~~~~~~~~~~~-~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~ 111 (221)
T d1h6da1 34 FGYAIVGLGKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNS 111 (221)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGG
T ss_pred EEEEEEcCcHHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchh
Confidence 3799999999997 566666543 57888855 66666554432 223321 1 12332 23 4799999877764
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.73 E-value=0.16 Score=44.76 Aligned_cols=33 Identities=27% Similarity=0.361 Sum_probs=29.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~ 118 (268)
..||||+|+|-||..+++.|... |. +++.+|.+
T Consensus 37 ~~kVlvvG~GglG~ei~k~L~~~--Gvg~i~lvD~D 70 (426)
T d1yovb1 37 TCKVLVIGAGGLGCELLKNLALS--GFRQIHVIDMD 70 (426)
T ss_dssp HCCEEEECSSTTHHHHHHHHHTT--TCCCEEEECCC
T ss_pred cCeEEEECCCHHHHHHHHHHHHc--CCCeEEEEECC
Confidence 35899999999999999999998 88 78888865
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.25 E-value=0.25 Score=38.79 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=27.5
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
+++|+|+|++|-.++..|++..+..+|+.+++.
T Consensus 6 ~~vIvG~G~aG~~~A~~Lr~~~~~~~I~li~~e 38 (213)
T d1m6ia1 6 PFLLIGGGTAAFAAARSIRARDPGARVLIVSED 38 (213)
T ss_dssp EEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 689999999999999999988334468888764
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=89.19 E-value=0.28 Score=41.88 Aligned_cols=67 Identities=13% Similarity=0.132 Sum_probs=50.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhh----hc-CCceeeccCc--cccCCCCEEEEccC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN-MGITPSLKWT--EATQKFPYVIFCAP 151 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l----~~-~~i~~~~~D~--~~~~~~D~Vi~~a~ 151 (268)
+++.|+|+|..+..-++.+.+..+=.+|++.+|++++.+.+ .. .|++....+. +++.++|+|+-|.+
T Consensus 129 ~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 129 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA 202 (340)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred ceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccc
Confidence 57999999999999888887764445899999987765433 22 3666665543 58999999987654
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.12 E-value=0.21 Score=38.73 Aligned_cols=31 Identities=16% Similarity=0.079 Sum_probs=29.0
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.|+|+|+|+.|...+.++.+. |.+|.++.++
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~--G~kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMY--GQKCALIEAK 34 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--TCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCEEEEEecc
Confidence 589999999999999999999 9999999875
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=88.82 E-value=0.19 Score=41.22 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=29.9
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|..|...+.+|.++ |.+|+++.+.+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~--G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDS--GAKVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEecCC
Confidence 699999999999999999999 99999998764
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=88.80 E-value=0.16 Score=39.78 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=30.0
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCC-------CeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G-------~~V~~~~R~~~ 120 (268)
.||+|+|+|.=|...+.+|.++ | ++|+++.+.+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~--G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKA--ADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHc--CCccccCCCceEEEecCCC
Confidence 4899999999999999999988 7 57999998653
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=88.48 E-value=0.28 Score=40.67 Aligned_cols=46 Identities=20% Similarity=0.241 Sum_probs=31.4
Q ss_pred CeEEEE--cc-cHH--HHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceee
Q 024417 85 NDLLIV--GP-GVL--GRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS 133 (268)
Q Consensus 85 ~kVLI~--Ga-G~I--G~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~ 133 (268)
|||||. |+ |-+ .-.|+++|+++ ||+|+.++- ++..+.++..|++.+
T Consensus 1 mkil~~~~gt~Gh~~P~lala~~L~~~--Gh~V~~~~~-~~~~~~v~~~g~~~~ 51 (401)
T d1iira_ 1 MRVLLATCGSRGDTEPLVALAVRVRDL--GADVRMCAP-PDCAERLAEVGVPHV 51 (401)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHT--TCEEEEEEC-GGGHHHHHHTTCCEE
T ss_pred CEEEEECCCChhHHHHHHHHHHHHHHC--CCEEEEEeC-cchHHHHHHcCCeEE
Confidence 578887 55 666 55699999999 999998873 233334444555543
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=88.24 E-value=0.25 Score=40.15 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=29.4
Q ss_pred eEEEEcccHHHHHHHHHHHh-cCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQ-EHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~-~~~G~~V~~~~R~~~ 120 (268)
.|+|+|+|.-|...+.+|.+ . |++|.++++.+.
T Consensus 35 DViVIGaGpaGL~aA~~LA~~~--G~~V~vlE~~~~ 68 (278)
T d1rp0a1 35 DVVVVGAGSAGLSAAYEISKNP--NVQVAIIEQSVS 68 (278)
T ss_dssp EEEEECCSHHHHHHHHHHHTST--TSCEEEEESSSS
T ss_pred CEEEECCCHHHHHHHHHHHHcc--CCeEEEEecCCC
Confidence 59999999999999999976 5 999999998753
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=87.49 E-value=0.3 Score=37.70 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=29.7
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|..|...+..+.+. |.+|.++.+.+
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~--G~kV~vie~~~ 36 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRG 36 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCCEEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEecC
Confidence 699999999999999999999 99999998754
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=87.48 E-value=0.28 Score=36.88 Aligned_cols=35 Identities=17% Similarity=0.258 Sum_probs=28.8
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
|++|.|.|+ |-||....+-+.+....++|.+++-+
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~ 36 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG 36 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence 789999997 99999999988775335799988754
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=87.38 E-value=0.61 Score=37.48 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=27.9
Q ss_pred CCCeEEEEcccHHHHHHHHHHH-hcCCCCeEEEEe
Q 024417 83 GENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQT 116 (268)
Q Consensus 83 ~m~kVLI~GaG~IG~~L~~~L~-~~~~G~~V~~~~ 116 (268)
..++|+|=|.|.+|+++++.|. +. |..|++++
T Consensus 30 ~g~~vaIqG~GnVG~~~a~~L~~e~--Ga~vv~vs 62 (234)
T d1b26a1 30 KKATVAVQGFGNVGQFAALLISQEL--GSKVVAVS 62 (234)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHH--CCEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhc--CCceEEee
Confidence 4578999999999999999996 57 99998776
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=87.33 E-value=0.32 Score=40.42 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=29.1
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.|+|+|+|.-|.-+|.+|.+. |++|.++.+.
T Consensus 6 DviIVGsG~aG~v~A~~La~~--G~kVlvLEaG 36 (379)
T d2f5va1 6 DVVIVGSGPIGCTYARELVGA--GYKVAMFDIG 36 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhhC--CCeEEEEecC
Confidence 599999999999999999998 9999999875
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=86.61 E-value=0.3 Score=41.14 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=29.0
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.++|+|+|+-|..+|.+|.+. |++|.++.+.
T Consensus 9 dvIVVGsG~aG~v~A~rLaea--G~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIGSGYGGAVAALRLTQA--GIPTQIVEMG 39 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 589999999999999999998 9999999875
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=86.12 E-value=0.36 Score=37.53 Aligned_cols=32 Identities=28% Similarity=0.193 Sum_probs=29.6
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
-.|+|+|+|..|...+..+.+. |.+|..+.++
T Consensus 6 ~DlvVIG~GpaGl~aA~~aa~~--G~~V~liE~~ 37 (220)
T d1lvla1 6 TTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQ 37 (220)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC--CCcEEEEecC
Confidence 3799999999999999999999 9999999875
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.01 E-value=0.89 Score=36.59 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=28.3
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHh-cCCCCeEEEEeC
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQ-EHPGCQIYGQTM 117 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~-~~~G~~V~~~~R 117 (268)
...++|+|-|.|.+|.++++.|.+ . |..|+++.-
T Consensus 30 l~g~~v~IqGfGnVG~~~a~~L~~~~--G~kvv~vsD 64 (239)
T d1gtma1 30 LKGKTIAIQGYGNAGYYLAKIMSEDF--GMKVVAVSD 64 (239)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT--CCEEEEEEC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHhc--Ccceeeccc
Confidence 345789999999999999999975 5 888887754
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.42 E-value=0.5 Score=36.97 Aligned_cols=31 Identities=23% Similarity=0.451 Sum_probs=28.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R 117 (268)
|||++.|.+..|..+.+.|+++ |++|.++..
T Consensus 1 MkI~~~G~~~~~~~~l~~L~~~--~~~i~~V~t 31 (203)
T d2bw0a2 1 MKIAVIGQSLFGQEVYCHLRKE--GHEVVGVFT 31 (203)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHC--CCcEEEEEc
Confidence 6899999999999999999999 999997654
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=85.36 E-value=0.38 Score=39.77 Aligned_cols=32 Identities=25% Similarity=0.358 Sum_probs=30.0
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|.-|...+..|.++ |.+|+++.+.+
T Consensus 25 DVvVIG~G~aGl~aA~~la~~--G~~V~llEk~~ 56 (322)
T d1d4ca2 25 DVVIIGSGGAGLAAAVSARDA--GAKVILLEKEP 56 (322)
T ss_dssp SEEEECSSHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred eEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 699999999999999999999 99999998864
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=85.35 E-value=0.35 Score=39.63 Aligned_cols=32 Identities=22% Similarity=0.313 Sum_probs=23.6
Q ss_pred CeEEEEccc---HH--HHHHHHHHHhcCCCCeEEEEeCC
Q 024417 85 NDLLIVGPG---VL--GRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 85 ~kVLI~GaG---~I--G~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
|||||+++| -+ ...|+++|.++ ||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~--G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhC--CCEEEEEEeC
Confidence 589998644 33 33488999998 9999887654
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=84.59 E-value=0.48 Score=36.15 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=27.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEe
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~ 116 (268)
+||.|=|.|-|||.+.|.|.++ +.+|.++-
T Consensus 1 ikigINGfGRIGR~~~R~l~~~--~i~iv~IN 30 (168)
T d2g82a1 1 MKVGINGFGRIGRQVFRILHSR--GVEVALIN 30 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHhcC--CCEEEEEC
Confidence 4899999999999999999998 99998775
|
| >d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.44 E-value=0.49 Score=38.99 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=31.1
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
.+|+|+|+|.-|...+..|.++.+|++|+++.+++.
T Consensus 51 ~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~~ 86 (311)
T d2gjca1 51 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 86 (311)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcCCC
Confidence 479999999999999999986545999999998643
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=84.19 E-value=0.54 Score=38.82 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=24.8
Q ss_pred CeEEEE--cc-cHH--HHHHHHHHHhcCCCCeEEEEeC
Q 024417 85 NDLLIV--GP-GVL--GRLVAEQWRQEHPGCQIYGQTM 117 (268)
Q Consensus 85 ~kVLI~--Ga-G~I--G~~L~~~L~~~~~G~~V~~~~R 117 (268)
|||||+ |+ |.| --.|+++|.++ ||+|+.++.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~r--Gh~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLREL--GADARMCLP 36 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHC--CCEEEEEEC
Confidence 588886 55 766 45689999999 999998874
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=84.17 E-value=0.56 Score=34.99 Aligned_cols=31 Identities=29% Similarity=0.259 Sum_probs=28.3
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.|+|+|+|..|-.-+..+.+. |.+|..+.+.
T Consensus 3 DViIIGgGpaGl~AAi~aar~--G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARK--GIRTGLMGER 33 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--TCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHHHc--CCeEEEEEEe
Confidence 589999999999999999999 9999999864
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.96 E-value=0.49 Score=39.07 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=29.8
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|..|...+.++.++ |.+|+++.+.+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~--G~~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKA--GANVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHH--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 699999999999999999999 99999998754
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=83.88 E-value=0.64 Score=35.90 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=29.9
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~ 120 (268)
.|+|+|+|.-|...+.++.+. |.+|.++++.+.
T Consensus 7 DviVIG~GpAGl~aA~~aa~~--G~kV~lie~~~~ 39 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGK 39 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCC
Confidence 599999999999999999999 999999987543
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=83.59 E-value=0.59 Score=35.35 Aligned_cols=34 Identities=26% Similarity=0.158 Sum_probs=30.0
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.++|+|+|.|..|..-+..|.+. |.+|+.+.+..
T Consensus 5 ~~dVvIIGGGpaGl~AA~~~ar~--g~~v~iie~~~ 38 (190)
T d1trba1 5 HSKLLILGSGPAGYTAAVYAARA--NLQPVLITGME 38 (190)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTT--TCCCEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHc--CCceEEEEeec
Confidence 35799999999999999999999 99999998753
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.34 E-value=0.44 Score=36.34 Aligned_cols=33 Identities=18% Similarity=-0.021 Sum_probs=29.5
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
++|+|+|+|..|..-+..|.+. |.+|.++++..
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~--g~~v~vie~~~ 38 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGWM 38 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEECCSS
T ss_pred ceEEEECCCHHHHHHHHHHHHc--CCcEEEEEeec
Confidence 5899999999999999999999 99999998643
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.30 E-value=0.3 Score=38.59 Aligned_cols=35 Identities=9% Similarity=0.076 Sum_probs=26.4
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCcc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~~ 122 (268)
..+||..|||. | ..+..|.+. |++|++++-++...
T Consensus 46 ~~rvLd~GCG~-G-~~a~~LA~~--G~~V~gvD~S~~ai 80 (229)
T d2bzga1 46 GLRVFFPLCGK-A-VEMKWFADR--GHSVVGVEISELGI 80 (229)
T ss_dssp SCEEEETTCTT-C-THHHHHHHT--TCEEEEECSCHHHH
T ss_pred CCEEEEeCCCC-c-HHHHHHHhC--CCcEEEEeCCHHHH
Confidence 35899999965 3 346666678 99999999876543
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=82.99 E-value=0.77 Score=35.83 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=27.4
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R 117 (268)
|||++.|.+-.|..+.+.|.+. |++|.++.-
T Consensus 1 Mkiv~~~~~~~g~~~l~~L~~~--g~~I~~Vvt 31 (203)
T d2blna2 1 MKTVVFAYHDMGCLGIEALLAA--GYEISAIFT 31 (203)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred CeEEEEecCHHHHHHHHHHHHC--CCCEEEEEc
Confidence 5889999988999999999999 999987654
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=82.86 E-value=0.8 Score=34.08 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=28.6
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC-eEEEEeCCC
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~-~V~~~~R~~ 119 (268)
.++|+|+|.|.+|...+..+++. |. .|+.+.|.+
T Consensus 45 ~~kVvVIGGGdtA~D~A~~a~r~--GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLGAGDTAFDCATSALRC--GARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHT--TCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHc--CCcceeEEEeCC
Confidence 35899999999999999999998 86 577777753
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=82.63 E-value=0.68 Score=38.33 Aligned_cols=45 Identities=20% Similarity=0.329 Sum_probs=29.5
Q ss_pred CeEEEE--cc-cHH--HHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCcee
Q 024417 85 NDLLIV--GP-GVL--GRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP 132 (268)
Q Consensus 85 ~kVLI~--Ga-G~I--G~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~ 132 (268)
||||++ |+ |-+ --.|+++|+++ ||+|+.++.. ...+.++..|++.
T Consensus 1 mrIl~~~~gt~Ghv~P~l~lA~~L~~r--Gh~V~~~t~~-~~~~~v~~~g~~~ 50 (401)
T d1rrva_ 1 MRVLLSVCGTRGDVEIGVALADRLKAL--GVQTRMCAPP-AAEERLAEVGVPH 50 (401)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHT--TCEEEEEECG-GGHHHHHHHTCCE
T ss_pred CeEEEECCCChhHHHHHHHHHHHHHHC--CCEEEEEECh-hhHHHHHHCCCeE
Confidence 588876 55 644 44688999999 9999988742 2233344445444
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.22 E-value=0.75 Score=35.31 Aligned_cols=31 Identities=23% Similarity=0.231 Sum_probs=28.8
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
.|+|+|+|..|...+..+.+. |.+|.++.+.
T Consensus 5 DviIIG~GpaG~~aA~~aar~--G~kV~vIEk~ 35 (221)
T d3grsa1 5 DYLVIGGGSGGLASARRAAEL--GARAAVVESH 35 (221)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCEEEEEecc
Confidence 589999999999999999999 9999999874
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=82.10 E-value=0.15 Score=38.76 Aligned_cols=23 Identities=17% Similarity=0.367 Sum_probs=19.5
Q ss_pred CCeEEEEcccHHHHHHHHHHHhc
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQE 106 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~ 106 (268)
+.+|.|+|+|.+|+..++.|.+.
T Consensus 7 k~kv~iIG~G~~g~~h~~~l~~~ 29 (172)
T d1lc0a1 7 KFGVVVVGVGRAGSVRLRDLKDP 29 (172)
T ss_dssp SEEEEEECCSHHHHHHHHHHTSH
T ss_pred CcEEEEEcCCHHHHHHHHHHHhC
Confidence 45899999999999988888653
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=81.61 E-value=0.55 Score=35.14 Aligned_cols=35 Identities=14% Similarity=0.275 Sum_probs=28.3
Q ss_pred CCeEEEEcc-cHHHHHHHHHHHhcCCCCeEEEEeCC
Q 024417 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (268)
Q Consensus 84 m~kVLI~Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~ 118 (268)
|++|.|.|+ |-||....+-+.+....++|.+++-+
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~ 37 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN 37 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence 578999997 99999998888764225899998764
|
| >d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=81.50 E-value=0.31 Score=36.13 Aligned_cols=28 Identities=29% Similarity=0.258 Sum_probs=24.7
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCCeEE
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIY 113 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~ 113 (268)
.++|+|+|.|++|..+++.+.+. |.++.
T Consensus 29 gkrVvVIGgG~~g~d~a~~~~r~--G~~~~ 56 (162)
T d1ps9a2 29 GNKVAIIGCGGIGFDTAMYLSQP--GESTS 56 (162)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCC--SSCGG
T ss_pred CCceEEEcCchhHHHHHHHHHHc--CCccc
Confidence 46999999999999999999998 87543
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.28 E-value=0.73 Score=39.41 Aligned_cols=33 Identities=27% Similarity=0.375 Sum_probs=29.6
Q ss_pred eEEEEcccHHHHHHHHHHHh------cCCCCeEEEEeCCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQ------EHPGCQIYGQTMTAD 120 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~------~~~G~~V~~~~R~~~ 120 (268)
.|+|+|+|.-|...+..|.+ + |++|.++.|...
T Consensus 34 DViIVGgGPAGlsaA~~LA~l~~~~~~--Gl~VlllEK~~~ 72 (380)
T d2gmha1 34 DVVIVGAGPAGLSAATRLKQLAAQHEK--DLRVCLVEKAAH 72 (380)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTC--CCCEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhhhhhhcC--CCEEEEEcCCCC
Confidence 69999999999999999986 6 999999998754
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.24 E-value=0.86 Score=34.83 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=29.7
Q ss_pred CeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 85 ~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
-.|+|+|+|..|...+..+.+. |.+|.++.+..
T Consensus 4 ~DviVIG~GpaGl~aA~~aar~--G~kV~vIEk~~ 36 (223)
T d1ebda1 4 TETLVVGAGPGGYVAAIRAAQL--GQKVTIVEKGN 36 (223)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCEEEEEecCC
Confidence 3689999999999999999999 99999998753
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=81.23 E-value=1.1 Score=34.09 Aligned_cols=66 Identities=17% Similarity=0.227 Sum_probs=46.0
Q ss_pred CeEEEE-cc-cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchh----hhcCCceeecc----Cc-c-----------ccCC
Q 024417 85 NDLLIV-GP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMGITPSLK----WT-E-----------ATQK 142 (268)
Q Consensus 85 ~kVLI~-Ga-G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~----l~~~~i~~~~~----D~-~-----------~~~~ 142 (268)
.+|+|. |+ |-+|...++..+.. |.+|++++|+.++.++ +++.|.+.++. |. + .-.+
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~--Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CEEEEEeCCCchHHHHHHHHHhhc--CCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence 467775 54 99999999999999 9999999988765432 34456544421 11 0 1356
Q ss_pred CCEEEEccCC
Q 024417 143 FPYVIFCAPP 152 (268)
Q Consensus 143 ~D~Vi~~a~~ 152 (268)
+|+|+.+.+.
T Consensus 108 vdvv~D~vg~ 117 (189)
T d1gu7a2 108 AKLALNCVGG 117 (189)
T ss_dssp EEEEEESSCH
T ss_pred ceEEEECCCc
Confidence 8999988763
|
| >d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Homoserine dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.16 E-value=0.81 Score=34.54 Aligned_cols=33 Identities=15% Similarity=0.242 Sum_probs=24.9
Q ss_pred CCeEEEEcccHHHHHHHHHHHhcCCCC--eEEEEe
Q 024417 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQT 116 (268)
Q Consensus 84 m~kVLI~GaG~IG~~L~~~L~~~~~G~--~V~~~~ 116 (268)
+.+|.|+|.|.||+.++++|.++..+. +|.++.
T Consensus 4 ~i~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~ 38 (168)
T d1ebfa1 4 VVNVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLA 38 (168)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEE
T ss_pred EEEEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEE
Confidence 457999999999999999998762234 444544
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=80.70 E-value=2.4 Score=30.65 Aligned_cols=82 Identities=15% Similarity=0.172 Sum_probs=50.9
Q ss_pred CeEEEEcc----cHHHHHHHHHHHhcCCCCeEEEEeCCCCcchhhhcCCceeeccCc-cccCCCCEEEEccCCCCCCChH
Q 024417 85 NDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLDYP 159 (268)
Q Consensus 85 ~kVLI~Ga----G~IG~~L~~~L~~~~~G~~V~~~~R~~~~~~~l~~~~i~~~~~D~-~~~~~~D~Vi~~a~~~~~~~~~ 159 (268)
++|.|+|+ +-.|..+.+.|++. |+++..+--++.. ..+ .|...+ .+. +.-..+|.|+.+.++....+.+
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~--g~~~~~v~~~~~~-~~i--~g~~~~-~~l~~i~~~iD~v~v~~p~~~v~~~v 87 (136)
T d1iuka_ 14 KTIAVLGAHKDPSRPAHYVPRYLREQ--GYRVLPVNPRFQG-EEL--FGEEAV-ASLLDLKEPVDILDVFRPPSALMDHL 87 (136)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT--TCEEEEECGGGTT-SEE--TTEECB-SSGGGCCSCCSEEEECSCHHHHTTTH
T ss_pred CeEEEEeecCCCCCchHHHHHHHhcC--CCCceEEEecccc-cee--eceecc-cchhhccCCCceEEEeccHHHHHHHH
Confidence 57999994 78999999999999 9998876543221 111 233333 222 3345789999888765433222
Q ss_pred HHHHHHHHHhcCCCeEEE
Q 024417 160 GDVRLAALSWNGEGSFLF 177 (268)
Q Consensus 160 ~~~~~~~~~~~gvkr~V~ 177 (268)
+.+ .+.|++.+++
T Consensus 88 ---~~~--~~~g~k~i~~ 100 (136)
T d1iuka_ 88 ---PEV--LALRPGLVWL 100 (136)
T ss_dssp ---HHH--HHHCCSCEEE
T ss_pred ---HHH--HhhCCCeEEE
Confidence 222 2347776655
|
| >d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=80.58 E-value=1.2 Score=34.13 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=32.7
Q ss_pred CCCCeEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCCCc
Q 024417 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (268)
Q Consensus 82 ~~m~kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~~~ 121 (268)
...|+|+|+|+|.-|-.++.++.+. +.+++.+.|....
T Consensus 30 ~~gK~V~VvG~G~Sa~dia~~~~~~--~~~~~~~~~~~~~ 67 (235)
T d1w4xa2 30 FSGQRVGVIGTGSSGIQVSPQIAKQ--AAELFVFQRTPHF 67 (235)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHH--BSEEEEEESSCCC
T ss_pred CCCCEEEEECCCccHHHHHHHHHhh--hccccccccccce
Confidence 3468999999999999999999999 8888888876543
|
| >d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]
Probab=80.26 E-value=1 Score=37.91 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=29.3
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.++|+|+|.-|.-+|.+|.+. |.+|.++-+..
T Consensus 4 D~IIVGsG~aG~v~A~rLae~--g~~VlvLEaG~ 35 (360)
T d1kdga1 4 DYIIVGAGPGGIIAADRLSEA--GKKVLLLERGG 35 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHhhC--CCeEEEEEccC
Confidence 589999999999999999998 99999998864
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=80.07 E-value=1.1 Score=34.89 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=29.5
Q ss_pred eEEEEcccHHHHHHHHHHHhcCCCCeEEEEeCCC
Q 024417 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (268)
Q Consensus 86 kVLI~GaG~IG~~L~~~L~~~~~G~~V~~~~R~~ 119 (268)
.|+|+|+|.-|...+..|.+. |.+|..+.+.+
T Consensus 8 DviIIG~GPaGlsaA~~aa~~--G~~V~viE~~~ 39 (229)
T d1ojta1 8 DVVVLGGGPGGYSAAFAAADE--GLKVAIVERYK 39 (229)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCeEEEEeccC
Confidence 589999999999999999999 99999998764
|