Citrus Sinensis ID: 024418

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
MTFMDHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEASASITLFSQQSTLN
ccccccHHHHHHHHHHHHHHHHHHHcEEEEEEEccccccccccccccccccccccccccccccccccHHHcHHHHHcccccccccEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccc
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEEccEEEEEcEEcccccccccccccccccccccccEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccEEEEEccHHHHHHHHHHHHcccccccccccccccHHHHccccccccEEEHHHHHHHccccccccccccccHHHHHHHccccccccccccEEcEcccccccccccccccHHHHHHHHHHHHHHcccc
MTFMDHPIYYLWELVKHRLEAYICCIIEYdiccklplasnsilylpnyLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVrhgqgvhnmegnngpeallSQEFfdahlsplgwqqvgNLRKRveasgltqkidlVITSPLLRTLQTAVgvfggdgesqtdgidahpsltatatvncppiIAVELCRERLVRVLpnacsvhknqdgyhmtapygsfnfqHTCIILLTAasssacrgFIHVTREEASASITLFSQQSTLN
MTFMDHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEasgltqkidlvitspllRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEAsasitlfsqqstln
MTFMDHPIYYLWELVKHRLEAyicciieydiccKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEASASITLFSQQSTLN
***MDHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGE***DGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTRE****************
****DHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDT************************YSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEASASITLFSQ**T**
MTFMDHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEASASITLFSQQSTLN
*TFMDHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEASASITLFSQQSTLN
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTFMDHPIYYLWELVKHRLEAYICCIIEYDICCKLPLASNSILYLPNYLVACDTLVLSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCIILLTAASSSACRGFIHVTREEASASITLFSQQSTLN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
449459558356 PREDICTED: uncharacterized protein LOC10 0.679 0.511 0.453 1e-38
357490187229 Phosphoglycerate mutase-like protein [Me 0.485 0.567 0.546 2e-37
255572816273 catalytic, putative [Ricinus communis] g 0.477 0.468 0.575 3e-37
357490185311 Phosphoglycerate mutase-like protein [Me 0.485 0.418 0.546 3e-37
255638448274 unknown [Glycine max] 0.477 0.467 0.575 3e-37
356500785274 PREDICTED: uncharacterized protein C5H10 0.477 0.467 0.575 3e-37
312282981277 unnamed protein product [Thellungiella h 0.477 0.462 0.561 6e-37
388497444273 unknown [Medicago truncatula] 0.477 0.468 0.553 8e-37
357466833335 hypothetical protein MTR_3g111310 [Medic 0.623 0.498 0.483 9e-37
388499766285 unknown [Medicago truncatula] 0.447 0.421 0.595 1e-36
>gi|449459558|ref|XP_004147513.1| PREDICTED: uncharacterized protein LOC101216588 [Cucumis sativus] gi|449511380|ref|XP_004163940.1| PREDICTED: uncharacterized LOC101216588 [Cucumis sativus] Back     alignment and taxonomy information
 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/203 (45%), Positives = 121/203 (59%), Gaps = 21/203 (10%)

Query: 63  SVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLG 122
           S + +  +D      LY L  CK +HLVRH QG+HN++G+   +A +  EFFDAH++ LG
Sbjct: 55  SFIPYFDMDNGAGLSLYPLHRCKTIHLVRHAQGIHNVDGDKSYKAYMRPEFFDAHITQLG 114

Query: 123 WQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHPSLTATA 182
           WQQ+ NLRK V ASGL++KIDLV+TSPLLRTLQTAVGVFGG+G   T G+D  P + A A
Sbjct: 115 WQQIENLRKHVHASGLSRKIDLVVTSPLLRTLQTAVGVFGGEG--YTPGMDVLPLMIANA 172

Query: 183 ---------TVNCPPIIAVELCRERLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCII 233
                    ++NCPPI AVELCRE L  V P  C   +N   Y    P   F+       
Sbjct: 173 GNSARAAISSLNCPPIAAVELCREHL-GVHP--CDKRRNISDYQFLFPAVDFS------- 222

Query: 234 LLTAASSSACRGFIHVTREEASA 256
           L+ +      +  +  T+EE +A
Sbjct: 223 LIESDEDVLWKADVRETKEELAA 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|357490187|ref|XP_003615381.1| Phosphoglycerate mutase-like protein [Medicago truncatula] gi|355516716|gb|AES98339.1| Phosphoglycerate mutase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255572816|ref|XP_002527340.1| catalytic, putative [Ricinus communis] gi|223533259|gb|EEF35012.1| catalytic, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357490185|ref|XP_003615380.1| Phosphoglycerate mutase-like protein [Medicago truncatula] gi|355516715|gb|AES98338.1| Phosphoglycerate mutase-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|255638448|gb|ACU19533.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|356500785|ref|XP_003519211.1| PREDICTED: uncharacterized protein C5H10.03-like [Glycine max] Back     alignment and taxonomy information
>gi|312282981|dbj|BAJ34356.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|388497444|gb|AFK36788.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|357466833|ref|XP_003603701.1| hypothetical protein MTR_3g111310 [Medicago truncatula] gi|355492749|gb|AES73952.1| hypothetical protein MTR_3g111310 [Medicago truncatula] Back     alignment and taxonomy information
>gi|388499766|gb|AFK37949.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query268
TAIR|locus:2016640343 AT1G58280 [Arabidopsis thalian 0.541 0.422 0.512 2.4e-35
TAIR|locus:2827577271 AT2G17280 "AT2G17280" [Arabido 0.447 0.442 0.534 3.7e-32
TAIR|locus:2179381282 AT5G64460 "AT5G64460" [Arabido 0.537 0.510 0.474 1.3e-31
TAIR|locus:504956275231 AT1G09935 [Arabidopsis thalian 0.414 0.480 0.491 4.6e-25
TAIR|locus:1005716755260 AT1G09932 "AT1G09932" [Arabido 0.421 0.434 0.466 1.1e-21
DICTYBASE|DDB_G0287099222 DDB_G0287099 "phosphoglycerate 0.246 0.297 0.388 0.00037
TAIR|locus:2016640 AT1G58280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
 Identities = 80/156 (51%), Positives = 103/156 (66%)

Query:    57 LSLHCFSVVSFAALDAATAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDA 116
             LSL C S +    ++   ++ LY L  CK +HLVRH QG+HN+EG    +A LS++ FDA
Sbjct:    30 LSLRCCSSLPAHDMETKPSQGLYPLHRCKTIHLVRHAQGIHNVEGEKNHKAYLSEDLFDA 89

Query:   117 HLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGDGESQTDGIDAHP 176
             HL+PLGWQQV NL K V ASG++ +I+LV+ SPLLRTLQTAVG FGG+G    DG++   
Sbjct:    90 HLTPLGWQQVDNLHKHVNASGISNRIELVVVSPLLRTLQTAVGTFGGEGYK--DGVNTPL 147

Query:   177 SLTATA---------TVNCPPIIAVELCRERLVRVL 203
              +TA A          +N PP IAVE CRE LV +L
Sbjct:   148 LMTAGAGNSDRPAISRLNRPPFIAVESCREHLVCLL 183
GO:0005576 "extracellular region" evidence=ISM
GO:0009507 "chloroplast" evidence=ISM;IDA
TAIR|locus:2827577 AT2G17280 "AT2G17280" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179381 AT5G64460 "AT5G64460" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504956275 AT1G09935 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1005716755 AT1G09932 "AT1G09932" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0287099 DDB_G0287099 "phosphoglycerate/bisphosphoglycerate mutase family protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
Al_scaffold_0002_716
annotation not avaliable (343 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
cd07067153 cd07067, HP_PGM_like, Histidine phosphatase domain 1e-12
pfam00300154 pfam00300, His_Phos_1, Histidine phosphatase super 1e-10
COG0406208 COG0406, phoE, Broad specificity phosphatase PhoE 4e-10
smart00855158 smart00855, PGAM, Phosphoglycerate mutase family 5e-10
cd07040153 cd07040, HP, Histidine phosphatase domain found in 7e-10
PRK07238372 PRK07238, PRK07238, bifunctional RNase H/acid phos 2e-04
TIGR03162177 TIGR03162, ribazole_cobC, alpha-ribazole phosphata 0.003
>gnl|CDD|132718 cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information 
 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 9/71 (12%)

Query: 87  LHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVI 146
           L+LVRHG+   N EG         Q + D  L+  G +Q   L KR++  G+  K D + 
Sbjct: 2   LYLVRHGESEWNAEG-------RFQGWTDVPLTEKGREQARALGKRLKELGI--KFDRIY 52

Query: 147 TSPLLRTLQTA 157
           +SPL R +QTA
Sbjct: 53  SSPLKRAIQTA 63

Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG. Length = 153
>gnl|CDD|215845 pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1) Back     alignment and domain information
>gnl|CDD|223483 COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] Back     alignment and domain information
>gnl|CDD|214859 smart00855, PGAM, Phosphoglycerate mutase family Back     alignment and domain information
>gnl|CDD|132716 cd07040, HP, Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information
>gnl|CDD|180903 PRK07238, PRK07238, bifunctional RNase H/acid phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|234131 TIGR03162, ribazole_cobC, alpha-ribazole phosphatase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 268
PRK14119228 gpmA phosphoglyceromutase; Provisional 100.0
PRK14116228 gpmA phosphoglyceromutase; Provisional 100.0
PRK13463203 phosphatase PhoE; Provisional 100.0
PRK15004199 alpha-ribazole phosphatase; Provisional 99.97
PRK01295206 phosphoglyceromutase; Provisional 99.97
PRK14117230 gpmA phosphoglyceromutase; Provisional 99.97
PRK14118227 gpmA phosphoglyceromutase; Provisional 99.97
PRK14120249 gpmA phosphoglyceromutase; Provisional 99.97
PRK13462203 acid phosphatase; Provisional 99.97
PRK01112228 phosphoglyceromutase; Provisional 99.97
TIGR01258245 pgm_1 phosphoglycerate mutase, BPG-dependent, fami 99.97
PRK03482215 phosphoglycerate mutase; Provisional 99.97
TIGR03162177 ribazole_cobC alpha-ribazole phosphatase. Members 99.97
PRK14115247 gpmA phosphoglyceromutase; Provisional 99.97
COG0406208 phoE Broad specificity phosphatase PhoE and relate 99.97
TIGR03848204 MSMEG_4193 probable phosphomutase, MSMEG_4193 fami 99.96
KOG4754248 consensus Predicted phosphoglycerate mutase [Carbo 99.96
smart00855155 PGAM Phosphoglycerate mutase family. Phosphoglycer 99.96
PRK07238372 bifunctional RNase H/acid phosphatase; Provisional 99.96
PF00300158 His_Phos_1: Histidine phosphatase superfamily (bra 99.95
KOG0235214 consensus Phosphoglycerate mutase [Carbohydrate tr 99.94
PTZ00322664 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas 99.93
COG0588230 GpmA Phosphoglycerate mutase 1 [Carbohydrate trans 99.92
PTZ00123236 phosphoglycerate mutase like-protein; Provisional 99.91
PTZ00122299 phosphoglycerate mutase; Provisional 99.84
cd07067153 HP_PGM_like Histidine phosphatase domain found in 99.82
KOG3734272 consensus Predicted phosphoglycerate mutase [Carbo 99.75
cd07040153 HP Histidine phosphatase domain found in a functio 99.74
PRK06193206 hypothetical protein; Provisional 99.72
TIGR00249152 sixA phosphohistidine phosphatase SixA. 99.71
PRK15416201 lipopolysaccharide core heptose(II)-phosphate phos 99.67
PRK10848159 phosphohistidine phosphatase; Provisional 99.63
COG2062163 SixA Phosphohistidine phosphatase SixA [Signal tra 99.6
KOG0234438 consensus Fructose-6-phosphate 2-kinase/fructose-2 99.57
KOG4609284 consensus Predicted phosphoglycerate mutase [Gener 99.53
cd07061242 HP_HAP_like Histidine phosphatase domain found in 98.03
PF00328 347 His_Phos_2: Histidine phosphatase superfamily (bra 97.22
KOG3720 411 consensus Lysosomal & prostatic acid phosphatases 97.01
PRK10173 413 glucose-1-phosphatase/inositol phosphatase; Provis 96.31
PRK10172 436 phosphoanhydride phosphorylase; Provisional 96.05
KOG1057 1018 consensus Arp2/3 complex-interacting protein VIP1/ 92.19
KOG1382 467 consensus Multiple inositol polyphosphate phosphat 82.69
>PRK14119 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.7e-33  Score=244.38  Aligned_cols=151  Identities=17%  Similarity=0.134  Sum_probs=123.6

Q ss_pred             ccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcC
Q 024418           84 CKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGG  163 (268)
Q Consensus        84 ~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~  163 (268)
                      |++|||||||||.+|..+.++       |+.|.|||+.|++||+++++.|+..+  .++|.|||||++||+|||+++++.
T Consensus         1 m~~l~LvRHGeT~~N~~~~~~-------G~~D~pLt~~G~~QA~~l~~~L~~~~--~~~d~i~sSpL~Ra~~TA~~i~~~   71 (228)
T PRK14119          1 MPKLILCRHGQSEWNAKNLFT-------GWEDVNLSEQGINEATRAGEKVRENN--IAIDVAFTSLLTRALDTTHYILTE   71 (228)
T ss_pred             CCEEEEEeCCCCCcccCCCcc-------CCCCCCcCHHHHHHHHHHHHHHHhcC--CCCCEEEeCccHHHHHHHHHHHHh
Confidence            468999999999999999985       88999999999999999999998643  468999999999999999999875


Q ss_pred             CCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccC-----------
Q 024418          164 DGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTC-----------  231 (268)
Q Consensus       164 ~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~-----------  231 (268)
                      .+                  ....++..+++|+| +|| .|     +|++.+++.+.||...+..|..+           
T Consensus        72 ~~------------------~~~~~~~~~~~LrE~~fG-~w-----eG~~~~ei~~~~~~~~~~~w~~~~~~~~p~~~~~  127 (228)
T PRK14119         72 SK------------------QQWIPVYKSWRLNERHYG-GL-----QGLNKDDARKEFGEEQVHIWRRSYDVKPPAETEE  127 (228)
T ss_pred             cc------------------cCCCCeeECCCccccccc-cc-----cCCcHHHHHHHccHHHHHHHHcccccCCCccccc
Confidence            41                  01246788999999 999 99     99999999998885323333211           


Q ss_pred             ------------------CCCCCCHHHHHhhhc--cc--c-cc--CCCEEEEEeCCccccC
Q 024418          232 ------------------IILLTAASSSACRGF--IH--V-TR--EEASASITLFSQQSTL  267 (268)
Q Consensus       232 ------------------~~~~ES~~~~~~Rv~--L~--~-~~--~~~~IlIVsHgg~i~l  267 (268)
                                        .+.+||+.++.+|+.  ++  . ..  ++++|||||||++|+.
T Consensus       128 ~~~~~~~~~~~~~~~~~~~p~GES~~~~~~Rv~~~l~~~~~~~~~~~~~vlvVsHg~vir~  188 (228)
T PRK14119        128 QREAYLADRRYNHLDKRMMPYSESLKDTLVRVIPFWTDHISQYLLDGQTVLVSAHGNSIRA  188 (228)
T ss_pred             ccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhhccCCCeEEEEeChHHHHH
Confidence                              134599999999999  65  2 22  6789999999999863

>PRK14116 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK13463 phosphatase PhoE; Provisional Back     alignment and domain information
>PRK15004 alpha-ribazole phosphatase; Provisional Back     alignment and domain information
>PRK01295 phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK14117 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK14118 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK14120 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>PRK13462 acid phosphatase; Provisional Back     alignment and domain information
>PRK01112 phosphoglyceromutase; Provisional Back     alignment and domain information
>TIGR01258 pgm_1 phosphoglycerate mutase, BPG-dependent, family 1 Back     alignment and domain information
>PRK03482 phosphoglycerate mutase; Provisional Back     alignment and domain information
>TIGR03162 ribazole_cobC alpha-ribazole phosphatase Back     alignment and domain information
>PRK14115 gpmA phosphoglyceromutase; Provisional Back     alignment and domain information
>COG0406 phoE Broad specificity phosphatase PhoE and related phosphatases [General function prediction only] Back     alignment and domain information
>TIGR03848 MSMEG_4193 probable phosphomutase, MSMEG_4193 family Back     alignment and domain information
>KOG4754 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00855 PGAM Phosphoglycerate mutase family Back     alignment and domain information
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional Back     alignment and domain information
>PF00300 His_Phos_1: Histidine phosphatase superfamily (branch 1); InterPro: IPR013078 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle Back     alignment and domain information
>KOG0235 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional Back     alignment and domain information
>COG0588 GpmA Phosphoglycerate mutase 1 [Carbohydrate transport and metabolism] Back     alignment and domain information
>PTZ00123 phosphoglycerate mutase like-protein; Provisional Back     alignment and domain information
>PTZ00122 phosphoglycerate mutase; Provisional Back     alignment and domain information
>cd07067 HP_PGM_like Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information
>KOG3734 consensus Predicted phosphoglycerate mutase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd07040 HP Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information
>PRK06193 hypothetical protein; Provisional Back     alignment and domain information
>TIGR00249 sixA phosphohistidine phosphatase SixA Back     alignment and domain information
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional Back     alignment and domain information
>PRK10848 phosphohistidine phosphatase; Provisional Back     alignment and domain information
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms] Back     alignment and domain information
>KOG0234 consensus Fructose-6-phosphate 2-kinase/fructose-2,6-biphosphatase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4609 consensus Predicted phosphoglycerate mutase [General function prediction only] Back     alignment and domain information
>cd07061 HP_HAP_like Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction Back     alignment and domain information
>PF00328 His_Phos_2: Histidine phosphatase superfamily (branch 2); InterPro: IPR000560 The histidine phosphatase superfamily is so named because catalysis centres on a conserved His residue that is transiently phosphorylated during the catalytic cycle Back     alignment and domain information
>KOG3720 consensus Lysosomal & prostatic acid phosphatases [Lipid transport and metabolism] Back     alignment and domain information
>PRK10173 glucose-1-phosphatase/inositol phosphatase; Provisional Back     alignment and domain information
>PRK10172 phosphoanhydride phosphorylase; Provisional Back     alignment and domain information
>KOG1057 consensus Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton [Cytoskeleton] Back     alignment and domain information
>KOG1382 consensus Multiple inositol polyphosphate phosphatase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query268
3eoz_A214 Putative phosphoglycerate mutase; PGAM, malaria, s 2e-10
3mxo_A202 Serine/threonine-protein phosphatase PGAM5, mitoc; 1e-09
2qni_A219 AGR_C_517P, uncharacterized protein ATU0299; MCSG, 8e-09
2axn_A 520 6-phosphofructo-2-kinase/fructose-2,6- biphosphata 1e-07
1h2e_A207 Phosphatase, YHFR; hydrolase, broad specificity ph 1e-07
3d4i_A273 STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domai 3e-07
2a6p_A208 Possible phosphoglycerate mutase GPM2; predicted p 3e-07
1bif_A469 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; 4e-07
3hjg_A213 Putative alpha-ribazole-5'-phosphate phosphatase C 2e-06
3c7t_A263 Ecdysteroid-phosphate phosphatase; ecdysone, 2H-ph 2e-06
1v37_A177 Phosphoglycerate mutase; riken structu genomics/pr 2e-06
3e9c_A265 ZGC:56074; histidine phosphatase, hydrolase; 2.00A 4e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-06
3f3k_A265 Uncharacterized protein YKR043C; structural genomi 1e-05
3mbk_A264 Ubiquitin-associated and SH3 domain-containing PR; 6e-05
3dcy_A275 Regulator protein; OMIM 610775, C12ORF5, tigar, TP 1e-04
3f2i_A172 ALR0221 protein; alpha-beta protein, structural ge 8e-04
3r7a_A237 Phosphoglycerate mutase, putative; structural geno 8e-04
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum} Length = 214 Back     alignment and structure
 Score = 57.8 bits (140), Expect = 2e-10
 Identities = 15/71 (21%), Positives = 30/71 (42%), Gaps = 10/71 (14%)

Query: 87  LHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVI 146
           + LVRHGQ     +           +     L+  G +Q     K+++     +K+ ++ 
Sbjct: 24  IILVRHGQYERRYKD----------DENSKRLTKEGCKQADITGKKLKDILNNKKVSVIY 73

Query: 147 TSPLLRTLQTA 157
            S ++R  +TA
Sbjct: 74  HSDMIRAKETA 84
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A Length = 202 Back     alignment and structure
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str} Length = 219 Back     alignment and structure
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* Length = 520 Back     alignment and structure
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A Length = 207 Back     alignment and structure
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A Length = 273 Back     alignment and structure
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis} Length = 208 Back     alignment and structure
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A Length = 469 Back     alignment and structure
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} Length = 213 Back     alignment and structure
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori} Length = 263 Back     alignment and structure
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... Length = 177 Back     alignment and structure
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A Length = 265 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A* Length = 265 Back     alignment and structure
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A Length = 264 Back     alignment and structure
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens} Length = 275 Back     alignment and structure
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP} Length = 172 Back     alignment and structure
>3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis} Length = 237 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query268
4emb_A274 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.97
1h2e_A207 Phosphatase, YHFR; hydrolase, broad specificity ph 99.97
1fzt_A211 Phosphoglycerate mutase; open B-sheet-helices, iso 99.97
3d8h_A267 Glycolytic phosphoglycerate mutase; structural gen 99.97
4eo9_A268 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.97
3kkk_A258 Phosphoglycerate mutase; PGAM, glycolysis, malaria 99.97
2a6p_A208 Possible phosphoglycerate mutase GPM2; predicted p 99.97
1yfk_A262 Phosphoglycerate mutase 1; alpha/beta, isomerase, 99.97
1e58_A249 Phosphoglycerate mutase; phosphohistidine, glycoly 99.97
3gp3_A257 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.97
1rii_A265 2,3-bisphosphoglycerate-dependent phosphoglycerat; 99.97
1qhf_A240 Protein (phosphoglycerate mutase); transferase (ph 99.97
2hhj_A267 Bisphosphoglycerate mutase; isomerase; HET: NEP DG 99.97
3r7a_A237 Phosphoglycerate mutase, putative; structural geno 99.96
3hjg_A213 Putative alpha-ribazole-5'-phosphate phosphatase C 99.96
3f3k_A265 Uncharacterized protein YKR043C; structural genomi 99.96
2qni_A219 AGR_C_517P, uncharacterized protein ATU0299; MCSG, 99.96
3e9c_A265 ZGC:56074; histidine phosphatase, hydrolase; 2.00A 99.96
3dcy_A 275 Regulator protein; OMIM 610775, C12ORF5, tigar, TP 99.96
3d4i_A273 STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domai 99.95
3c7t_A263 Ecdysteroid-phosphate phosphatase; ecdysone, 2H-ph 99.95
1v37_A177 Phosphoglycerate mutase; riken structu genomics/pr 99.95
3mbk_A264 Ubiquitin-associated and SH3 domain-containing PR; 99.95
1bif_A469 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; 99.93
2axn_A 520 6-phosphofructo-2-kinase/fructose-2,6- biphosphata 99.92
3mxo_A202 Serine/threonine-protein phosphatase PGAM5, mitoc; 99.92
3eoz_A214 Putative phosphoglycerate mutase; PGAM, malaria, s 99.91
2rfl_A173 Putative phosphohistidine phosphatase SIXA; alpha- 99.88
1ujc_A161 Phosphohistidine phosphatase SIXA; alpha-beta fold 99.85
3fjy_A364 Probable MUTT1 protein; dimer, protein structure i 99.81
3f2i_A172 ALR0221 protein; alpha-beta protein, structural ge 99.78
4hbz_A186 Putative phosphohistidine phosphatase, SIXA; struc 99.68
1nd6_A 354 Prostatic acid phosphatase; PAP, prostate, phospha 97.27
3it3_A 342 Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A 96.86
1dkq_A 410 Phytase; histidine acid phosphatase fold, hydrolas 96.82
3ntl_A 398 Acid glucose-1-phosphate phosphatase; histidine ac 96.69
2wnh_A 418 3-phytase; histidine acid phosphatase, hydrolase; 96.48
1qwo_A 442 Phytase; alpha barrel, beta sandwich, orthogonal b 95.72
3k4q_A 444 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hex 95.56
2gfi_A 458 Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces 94.38
1qfx_A 460 Protein (PH 2.5 acid phosphatase); phosphomonoeste 85.67
>4emb_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.30A {Borrelia burgdorferi} Back     alignment and structure
Probab=99.97  E-value=1.5e-32  Score=244.68  Aligned_cols=160  Identities=15%  Similarity=0.042  Sum_probs=126.4

Q ss_pred             hhccccccCCccEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHH
Q 024418           74 TAKHLYSLQHCKILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRT  153 (268)
Q Consensus        74 ~~~~~~~~~~~~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra  153 (268)
                      .|....+..||++||||||||+.+|..+.++       |+.|+|||+.|++||+++++.|++.+  .++|.|||||+.||
T Consensus        17 ~~~~~~~~~mm~~i~LvRHGet~~n~~~~~~-------G~~D~pLT~~G~~QA~~l~~~L~~~~--~~~d~v~sSpl~Ra   87 (274)
T 4emb_A           17 QGPGSMLGDFMYKLVLVRHGESEWNKENLFT-------GWTDVKLSDKGIDEAVEAGLLLKQEG--YSFDIAFSSLLSRA   87 (274)
T ss_dssp             ---------CCEEEEEEECCCBTTTTTTCCC-------TTCCCCBCHHHHHHHHHHHHHHHHTT--CCCSEEEECSSHHH
T ss_pred             cCCCCCchhhceEEEEEeCCCCcccccCccc-------CCCCCCCCHHHHHHHHHHHHHHHhcC--CCCCEEEECChHHH
Confidence            4445566778899999999999999998884       78999999999999999999999754  57999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCccccccc--
Q 024418          154 LQTAVGVFGGDGESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHT--  230 (268)
Q Consensus       154 ~QTA~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~--  230 (268)
                      +|||+++++.++                  ....++..+++|+| +|| .|     +|++.+++.+.||...+..|..  
T Consensus        88 ~qTA~~i~~~~~------------------~~~~~~~~~~~L~E~~~G-~~-----eG~~~~ei~~~~p~~~~~~w~~~~  143 (274)
T 4emb_A           88 NDTLNIILRELG------------------QSYISVKKTWRLNERHYG-AL-----QGLNKSETAAKYGEDKVLIWRRSY  143 (274)
T ss_dssp             HHHHHHHHHHTT------------------CTTSEEEECGGGSCCCCG-GG-----TTCCHHHHHHHHCHHHHHHHHHCS
T ss_pred             HHHHHHHHHhcC------------------CCCCCeeECccccccccc-cc-----cCCCHHHHHHHhHHHHHHHHHhcc
Confidence            999999999872                  01247889999999 999 99     9999999998887532322321  


Q ss_pred             ---------------------------CCCCCCCHHHHHhhhc--cc-c-c---cCCCEEEEEeCCcccc
Q 024418          231 ---------------------------CIILLTAASSSACRGF--IH-V-T---REEASASITLFSQQST  266 (268)
Q Consensus       231 ---------------------------~~~~~ES~~~~~~Rv~--L~-~-~---~~~~~IlIVsHgg~i~  266 (268)
                                                 ..+.+||+.++.+|+.  ++ + .   .++++|+|||||++|+
T Consensus       144 ~~~pp~~~~~~~~~~~~d~~~~~~~~~~~p~gEs~~~~~~Rv~~~l~~l~~~~~~~~~~vlvVsHg~~i~  213 (274)
T 4emb_A          144 DVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLKDTVARVIPYWTDEIAKEVLEGKKVIVAAHGNSLR  213 (274)
T ss_dssp             SCCCCCCCTTSTTCGGGSGGGTTSCGGGSCSCCCHHHHHHHHHHHHHHTHHHHHHTTCCEEEEECHHHHH
T ss_pred             ccCCcccccccccccccccccccccccCCCCCCCHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeCHHHHH
Confidence                                       1134599999999999  55 2 2   4788999999999986
>1h2e_A Phosphatase, YHFR; hydrolase, broad specificity phosphatase, DPGM homolog; 1.69A {Bacillus stearothermophilus} SCOP: c.60.1.1 PDB: 1h2f_A* 1ebb_A Back     alignment and structure
>1fzt_A Phosphoglycerate mutase; open B-sheet-helices, isomerase; NMR {Schizosaccharomyces pombe} SCOP: c.60.1.1 Back     alignment and structure
>3d8h_A Glycolytic phosphoglycerate mutase; structural genomics, malaria, glycolysis, I structural genomics consortium, SGC; 2.01A {Cryptosporidium parvum} Back     alignment and structure
>4eo9_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.45A {Mycobacterium leprae} Back     alignment and structure
>3kkk_A Phosphoglycerate mutase; PGAM, glycolysis, malaria, structural genomics, medical STRU genomics of pathogenic protozoa, MSGPP; 2.08A {Plasmodium falciparum 3D7} PDB: 1xq9_A Back     alignment and structure
>2a6p_A Possible phosphoglycerate mutase GPM2; predicted phosphoglycerate mutase, structural genomics, PSI, structure initiative; 2.20A {Mycobacterium tuberculosis} Back     alignment and structure
>1yfk_A Phosphoglycerate mutase 1; alpha/beta, isomerase, hydrolase; HET: CIT; 2.70A {Homo sapiens} PDB: 1yjx_A* Back     alignment and structure
>1e58_A Phosphoglycerate mutase; phosphohistidine, glycolysis and gluconeogenesis, isomerase; HET: NEP; 1.25A {Escherichia coli} SCOP: c.60.1.1 PDB: 1e59_A* Back     alignment and structure
>3gp3_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyceromutase, decode, SBRI, niaid, UWPPG, glycolysis isomerase; HET: PG4 SEP; 1.50A {Burkholderia pseudomallei} SCOP: c.60.1.1 PDB: 3fdz_A* 3ezn_A* 3gp5_A* 3gw8_A* 3lnt_A Back     alignment and structure
>1rii_A 2,3-bisphosphoglycerate-dependent phosphoglycerat; phosphoglyerate mutase, SH3 domain binding, structural genom TBSGC; 1.70A {Mycobacterium tuberculosis} SCOP: c.60.1.1 Back     alignment and structure
>1qhf_A Protein (phosphoglycerate mutase); transferase (phosphoryl); HET: 3PG; 1.70A {Saccharomyces cerevisiae} SCOP: c.60.1.1 PDB: 5pgm_D 1bq3_D* 1bq4_D 4pgm_A 3pgm_A* Back     alignment and structure
>2hhj_A Bisphosphoglycerate mutase; isomerase; HET: NEP DG2 3PG; 1.50A {Homo sapiens} SCOP: c.60.1.1 PDB: 1t8p_A* 2f90_A* 2a9j_A* 2h4z_A* 2h52_A* 2h4x_A* 3nfy_A Back     alignment and structure
>3r7a_A Phosphoglycerate mutase, putative; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE EPE; 1.84A {Bacillus anthracis} Back     alignment and structure
>3hjg_A Putative alpha-ribazole-5'-phosphate phosphatase COBC; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 2.80A {Vibrio parahaemolyticus} Back     alignment and structure
>3f3k_A Uncharacterized protein YKR043C; structural genomics,, PSI-2, prote structure initiative; 1.75A {Saccharomyces cerevisiae} PDB: 3lg2_A 3oi7_A* 3ll4_A* Back     alignment and structure
>2qni_A AGR_C_517P, uncharacterized protein ATU0299; MCSG, in SITU proteolysis, structural genomics, PSI protein structure initiative; 1.80A {Agrobacterium tumefaciens str} Back     alignment and structure
>3e9c_A ZGC:56074; histidine phosphatase, hydrolase; 2.00A {Danio rerio} PDB: 3e9d_A 3e9e_A Back     alignment and structure
>3dcy_A Regulator protein; OMIM 610775, C12ORF5, tigar, TP53-induced glycolysis and apoptosis regulator, CAsp target, structural genomics medical relevance; HET: MSE; 1.75A {Homo sapiens} Back     alignment and structure
>3d4i_A STS-2 protein; PGM, 2H-phosphatase, PTP, SH3 domain, hydrolase; 1.95A {Mus musculus} PDB: 3d6a_A 3db1_A Back     alignment and structure
>3c7t_A Ecdysteroid-phosphate phosphatase; ecdysone, 2H-phosphatase, PGM, hydrolase; 1.76A {Bombyx mori} Back     alignment and structure
>1v37_A Phosphoglycerate mutase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.40A {Thermus thermophilus} SCOP: c.60.1.1 PDB: 1v7q_A 2hia_A 2pa0_A 2p2y_A 2p77_A 2p6m_A 2p9y_A 2p30_A 2ekz_A 2p9f_A 2p79_A 2p78_A 2p2z_A 2p75_A 2owe_A 2enu_A 2ekb_A 2p6o_A 2owd_A 2enw_A ... Back     alignment and structure
>3mbk_A Ubiquitin-associated and SH3 domain-containing PR; PGM, STS-1, signaling protein, low PH, alternative splicing, cytoplasm, nucleus, phosphoprotein; 1.35A {Mus musculus} PDB: 2ikq_A 2h0q_A Back     alignment and structure
>1bif_A 6-phosphofructo-2-kinase/ fructose-2,6-bisphospha; transferase (phospho), phosphatase, hydrolase (phosp glycolysis, bifunctional enzyme; HET: AGS; 2.00A {Rattus norvegicus} SCOP: c.37.1.7 c.60.1.4 PDB: 3bif_A* 2bif_A* 1k6m_A* 1c80_A* 1c7z_A* 1c81_A* 1tip_A* 1fbt_A Back     alignment and structure
>2axn_A 6-phosphofructo-2-kinase/fructose-2,6- biphosphatase 3 (6PF-2-K/FRU- 2,6-P2ASE brain/placenta-type...; bifunctional enzyme, EDTA complex; HET: F6P EDT ADP; 2.10A {Homo sapiens} PDB: 2dwo_A* 2dwp_A* 2i1v_B* 3qpu_A* 3qpv_A* 3qpw_A* Back     alignment and structure
>3mxo_A Serine/threonine-protein phosphatase PGAM5, mitoc; phosphoglycerate mutase family member 5, BXLBV68, MGC protein, structural genomics consortium; HET: PG4 PGE PEG; 1.70A {Homo sapiens} PDB: 3o0t_A Back     alignment and structure
>3eoz_A Putative phosphoglycerate mutase; PGAM, malaria, structural genomics, isomerase, structural GE consortium, SGC; 2.40A {Plasmodium falciparum} Back     alignment and structure
>2rfl_A Putative phosphohistidine phosphatase SIXA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.35A {Agrobacterium tumefaciens str} Back     alignment and structure
>1ujc_A Phosphohistidine phosphatase SIXA; alpha-beta fold, hydrolase; 1.90A {Escherichia coli} PDB: 1ujb_A Back     alignment and structure
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID} Back     alignment and structure
>3f2i_A ALR0221 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG, function; 2.00A {Nostoc SP} Back     alignment and structure
>4hbz_A Putative phosphohistidine phosphatase, SIXA; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, HP_PGM_LIKE; HET: PGE; 1.55A {Nakamurella multipartita} Back     alignment and structure
>1nd6_A Prostatic acid phosphatase; PAP, prostate, phosphate, inhibi hydrolase; HET: NAG MAN 1PE; 2.40A {Homo sapiens} SCOP: c.60.1.2 PDB: 1nd5_A* 2hpa_A* 1cvi_A* 1rpa_A* 1rpt_A* 2l3h_A 2l77_A 2l79_A Back     alignment and structure
>3it3_A Acid phosphatase; HAP, hydrolase; HET: 3AM; 1.50A {Francisella tularensis subsp} PDB: 4e3w_A 2glc_A 2glb_A 2gla_A 3it0_A* 3it1_A* 3it2_A 2p36_A* Back     alignment and structure
>1dkq_A Phytase; histidine acid phosphatase fold, hydrolase; HET: IHP; 2.05A {Escherichia coli} SCOP: c.60.1.2 PDB: 1dkp_A* 1dkm_A 1dkn_A 1dko_A 1dkl_A Back     alignment and structure
>3ntl_A Acid glucose-1-phosphate phosphatase; histidine acid phosphatase, phytate binding site, hydrolase; HET: IHP; 1.88A {Enterobacter cloacae} PDB: 1nt4_A* Back     alignment and structure
>2wnh_A 3-phytase; histidine acid phosphatase, hydrolase; 1.68A {Klebsiella pneumoniae} PDB: 2wni_A 2wu0_A Back     alignment and structure
>1qwo_A Phytase; alpha barrel, beta sandwich, orthogonal bundle, glycoprotein phosphohistidine, hydrolase; HET: NEP NAG; 1.50A {Aspergillus fumigatus} SCOP: c.60.1.2 PDB: 1skb_A* 1sk8_A* 1ska_A* 1sk9_A* Back     alignment and structure
>3k4q_A 3-phytase A; PHYA, 3-phosphotase, MYO-inositol hexakis phosphate phosphohydrolase, 37288-11-2, MYO-inositol hexakis sulfate, 62-1; HET: IHS NAG; 2.20A {Aspergillus niger} SCOP: c.60.1.2 PDB: 3k4p_A* 1ihp_A Back     alignment and structure
>2gfi_A Phytase; hydrolase; HET: NAG; 2.29A {Debaryomyces castellii} Back     alignment and structure
>1qfx_A Protein (PH 2.5 acid phosphatase); phosphomonoesterase, hydrolase; HET: NAG BMA MAN; 2.40A {Aspergillus niger} SCOP: c.60.1.2 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 268
d1e58a_247 c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia 1e-04
d1qhfa_240 c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yea 0.003
>d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli [TaxId: 562]} Length = 247 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate mutase-like
superfamily: Phosphoglycerate mutase-like
family: Cofactor-dependent phosphoglycerate mutase
domain: Phosphoglycerate mutase
species: Escherichia coli [TaxId: 562]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 9/74 (12%)

Query: 87  LHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVI 146
           L LVRHG+   N E            ++D  LS  G  +     K ++  G     D   
Sbjct: 5   LVLVRHGESQWNKEN-------RFTGWYDVDLSEKGVSEAKAAGKLLKEEGY--SFDFAY 55

Query: 147 TSPLLRTLQTAVGV 160
           TS L R + T   V
Sbjct: 56  TSVLKRAIHTLWNV 69
>d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 240 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query268
d1h2ea_207 Broad specificity phosphatase PhoE (YhfR) {Bacillu 99.98
d1e58a_247 Phosphoglycerate mutase {Escherichia coli [TaxId: 99.97
d1fzta_211 Phosphoglycerate mutase {Fission yeast (Schizosacc 99.97
d1riia_243 Phosphoglycerate mutase {Mycobacterium tuberculosi 99.96
d1xq9a_241 Phosphoglycerate mutase {Plasmodium falciparum [Ta 99.96
d2hhja1248 Phosphoglycerate mutase {Human (Homo sapiens) [Tax 99.96
d1bifa2219 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 99.96
d1v37a_171 Alpha-ribazole-5'-phosphate phosphatase {Thermus t 99.96
d1qhfa_240 Phosphoglycerate mutase {Baker's yeast (Saccharomy 99.95
d1nd6a_ 342 Prostatic acid phosphatase {Human (Homo sapiens) [ 97.53
d1qwoa_ 435 Phytase (myo-inositol-hexakisphosphate-3-phosphohy 97.26
d1ihpa_ 438 Phytase (myo-inositol-hexakisphosphate-3-phosphohy 97.14
d1dkla_ 409 Phytase (myo-inositol-hexakisphosphate-3-phosphohy 97.09
d1nt4a_ 391 Glucose-1-phosphatase {Escherichia coli [TaxId: 56 97.06
d1qfxa_ 447 Phytase (myo-inositol-hexakisphosphate-3-phosphohy 96.13
>d1h2ea_ c.60.1.1 (A:) Broad specificity phosphatase PhoE (YhfR) {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphoglycerate mutase-like
superfamily: Phosphoglycerate mutase-like
family: Cofactor-dependent phosphoglycerate mutase
domain: Broad specificity phosphatase PhoE (YhfR)
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=1e-33  Score=239.76  Aligned_cols=143  Identities=27%  Similarity=0.252  Sum_probs=124.7

Q ss_pred             cEEEEEcCCCCCCCCCCCCCCccccCCCCCCCCCCHhHHHHHHHHHHHHHhcCCCCCcCEEEEcChHHHHHHHHHHHcCC
Q 024418           85 KILHLVRHGQGVHNMEGNNGPEALLSQEFFDAHLSPLGWQQVGNLRKRVEASGLTQKIDLVITSPLLRTLQTAVGVFGGD  164 (268)
Q Consensus        85 ~~i~LVRHGes~~N~~~~~~~~~~~~~g~~D~pLT~~G~~QA~~lg~~L~~~~~~~~~d~IysSPl~Ra~QTA~~i~~~~  164 (268)
                      ++||||||||+.+|..+.++       |+.|+|||+.|++||+++|+.|+.    .+++.|||||+.||+|||+++++..
T Consensus         2 tti~lvRHGet~~n~~~~~~-------G~~D~~Lt~~G~~QA~~~~~~l~~----~~~~~i~sSpl~Ra~qTa~~i~~~~   70 (207)
T d1h2ea_           2 TTLYLTRHGETKWNVERRMQ-------GWQDSPLTEKGRQDAMRLGKRLEA----VELAAIYTSTSGRALETAEIVRGGR   70 (207)
T ss_dssp             EEEEEEECCCBHHHHTTBCC-------TTSCCCBCHHHHHHHHHHHHHTTT----SCCSEEEECSSHHHHHHHHHHHTTC
T ss_pred             cEEEEEeCCCCCccccCccc-------CCCCCCCCHHHHHHHHHHHhhhhc----cccceeecCccHHHHHHHhhhcccc
Confidence            58999999999999998884       789999999999999999999987    6799999999999999999999977


Q ss_pred             CCCCCCCCCCCCcccccccCCCCcEEeccchhh-hhcccCCcCCCCCCChhhHHHhCCCCcccccccCC-----CCCCCH
Q 024418          165 GESQTDGIDAHPSLTATATVNCPPIIAVELCRE-RLVRVLPNACSVHKNQDGYHMTAPYGSFNFQHTCI-----ILLTAA  238 (268)
Q Consensus       165 ~~~~~~~~~~~p~~~~~~~~~~~~i~~~~~L~E-~~G~~~~~~~d~g~~~~el~~~~p~~~~~~~~~~~-----~~~ES~  238 (268)
                                           ..++..++.|+| ++| .|     +|++.+++.+.+|.. +..|..++     +.+||+
T Consensus        71 ---------------------~~~~~~~~~L~E~~~g-~~-----~g~~~~e~~~~~~~~-~~~~~~~~~~~~~~~gEs~  122 (207)
T d1h2ea_          71 ---------------------LIPIYQDERLREIHLG-DW-----EGKTHDEIRQMDPIA-FDHFWQAPHLYAPQRGERF  122 (207)
T ss_dssp             ---------------------SCCEEECGGGSCCCCG-GG-----TTCBHHHHHHHCHHH-HHHHHHCGGGCCCSSSCCH
T ss_pred             ---------------------cccccccccccccCCC-cc-----ccccccccccccccc-ccccccCCccccccCCccc
Confidence                                 257899999999 999 88     999999999988764 55554433     344999


Q ss_pred             HHHHhhhc--cc--c-ccCCCEEEEEeCCcccc
Q 024418          239 SSSACRGF--IH--V-TREEASASITLFSQQST  266 (268)
Q Consensus       239 ~~~~~Rv~--L~--~-~~~~~~IlIVsHgg~i~  266 (268)
                      .++..|+.  ++  . ..++++|+|||||++|+
T Consensus       123 ~~~~~Rv~~~l~~l~~~~~~~~vlvVsHg~~i~  155 (207)
T d1h2ea_         123 CDVQQRALEAVQSIVDRHEGETVLIVTHGVVLK  155 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHCTTCEEEEEECHHHHH
T ss_pred             ccccccchhHHHhhhhccCCCeEEEEECHHHHH
Confidence            99999999  66  2 35678999999999986
>d1e58a_ c.60.1.1 (A:) Phosphoglycerate mutase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fzta_ c.60.1.1 (A:) Phosphoglycerate mutase {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Back     information, alignment and structure
>d1riia_ c.60.1.1 (A:) Phosphoglycerate mutase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1xq9a_ c.60.1.1 (A:) Phosphoglycerate mutase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d2hhja1 c.60.1.1 (A:3-250) Phosphoglycerate mutase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bifa2 c.60.1.4 (A:250-468) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1v37a_ c.60.1.1 (A:) Alpha-ribazole-5'-phosphate phosphatase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1qhfa_ c.60.1.1 (A:) Phosphoglycerate mutase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1nd6a_ c.60.1.2 (A:) Prostatic acid phosphatase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qwoa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus fumigatus [TaxId: 5085]} Back     information, alignment and structure
>d1ihpa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus ficuum [TaxId: 5058]} Back     information, alignment and structure
>d1dkla_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nt4a_ c.60.1.2 (A:) Glucose-1-phosphatase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qfxa_ c.60.1.2 (A:) Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) {Aspergillus niger [TaxId: 5061]} Back     information, alignment and structure