Citrus Sinensis ID: 024494
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 267 | ||||||
| 224100351 | 304 | predicted protein [Populus trichocarpa] | 0.685 | 0.601 | 0.792 | 2e-80 | |
| 297736912 | 410 | unnamed protein product [Vitis vinifera] | 0.722 | 0.470 | 0.725 | 5e-78 | |
| 225432384 | 343 | PREDICTED: uncharacterized protein LOC10 | 0.700 | 0.545 | 0.732 | 4e-77 | |
| 449466191 | 341 | PREDICTED: uncharacterized protein LOC10 | 0.835 | 0.653 | 0.598 | 1e-75 | |
| 255551645 | 287 | conserved hypothetical protein [Ricinus | 0.644 | 0.599 | 0.784 | 7e-75 | |
| 356512227 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.797 | 0.603 | 0.618 | 1e-70 | |
| 356524994 | 353 | PREDICTED: uncharacterized protein LOC10 | 0.797 | 0.603 | 0.614 | 5e-69 | |
| 297827493 | 344 | hypothetical protein ARALYDRAFT_903150 [ | 0.850 | 0.659 | 0.613 | 8e-69 | |
| 147774573 | 297 | hypothetical protein VITISV_001889 [Viti | 0.681 | 0.612 | 0.675 | 1e-67 | |
| 51970960 | 351 | unnamed protein product [Arabidopsis tha | 0.677 | 0.515 | 0.712 | 1e-67 |
| >gi|224100351|ref|XP_002311843.1| predicted protein [Populus trichocarpa] gi|222851663|gb|EEE89210.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 304 bits (779), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/183 (79%), Positives = 159/183 (86%)
Query: 55 MATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG 114
MA QV+A S+IGA EE ASSG VGENDLLIVGPGVLGRLVAE+WRQEHPGCQ+YG
Sbjct: 1 MAAPLQVSAFSTIGARNEELGTASSGLVGENDLLIVGPGVLGRLVAEKWRQEHPGCQVYG 60
Query: 115 QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGS 174
QT+T DHHDELI MGI PSLK T+ATQ++PYVIFCAPPSR+ DYPGDVR AALSWNG+GS
Sbjct: 61 QTVTTDHHDELIKMGINPSLKGTKATQQYPYVIFCAPPSRTSDYPGDVREAALSWNGDGS 120
Query: 175 FLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLYISL 234
F+FTSSSA YDC DNG C+EDSPVVPIGRSPRTDVLLKAEKV+LE GGC +RLAGLYIS
Sbjct: 121 FVFTSSSAPYDCFDNGQCNEDSPVVPIGRSPRTDVLLKAEKVVLESGGCAIRLAGLYISF 180
Query: 235 CYL 237
L
Sbjct: 181 SVL 183
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736912|emb|CBI26113.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 296 bits (759), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 140/193 (72%), Positives = 160/193 (82%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 106 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 165
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPSR+ DYP DVRL
Sbjct: 166 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVRL 225
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +LEFGGCV
Sbjct: 226 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKGVLEFGGCV 285
Query: 225 LRLAGLYISLCYL 237
LRLAGLYIS L
Sbjct: 286 LRLAGLYISFQIL 298
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432384|ref|XP_002276706.1| PREDICTED: uncharacterized protein LOC100251108 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/187 (73%), Positives = 157/187 (83%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 42 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 101
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPSR+ DYP DVRL
Sbjct: 102 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSRTSDYPADVRL 161
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +LEFGGCV
Sbjct: 162 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKGVLEFGGCV 221
Query: 225 LRLAGLY 231
LRLAGLY
Sbjct: 222 LRLAGLY 228
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449466191|ref|XP_004150810.1| PREDICTED: uncharacterized protein LOC101221257 [Cucumis sativus] gi|449496699|ref|XP_004160201.1| PREDICTED: uncharacterized protein LOC101225299 [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/234 (59%), Positives = 176/234 (75%), Gaps = 11/234 (4%)
Query: 1 MGTISCTNTVSLNGACTRF---FAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMAT 57
M I+ ++ + RF F +D L+S S F+ R + + P MA
Sbjct: 1 MEVITSFSSCKFHAKLPRFSTSFFSDHLASTTRSSFYPAR-FNYRRLPF-------KMAA 52
Query: 58 NFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117
QV+ASS+IGA E+ + +SSG G +DLLI+GPGVLGRLVA++WR+EHPGC+++GQT
Sbjct: 53 PLQVSASSTIGASDEKLETSSSGFTGAHDLLIIGPGVLGRLVAQKWREEHPGCEVHGQTF 112
Query: 118 TADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLF 177
TADHH+ELI +GI PSLK + ++FPYVIFCAPPSRS DYPGDVRLA SW+GEG+FLF
Sbjct: 113 TADHHEELIQLGIQPSLKGGDVGRRFPYVIFCAPPSRSPDYPGDVRLAGSSWDGEGTFLF 172
Query: 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLY 231
TSSSA YDC+DNG CDEDSPV+PIGRSPRTD+LLK+EK+++EFGGCVLRLAGLY
Sbjct: 173 TSSSAPYDCNDNGPCDEDSPVMPIGRSPRTDLLLKSEKIVIEFGGCVLRLAGLY 226
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255551645|ref|XP_002516868.1| conserved hypothetical protein [Ricinus communis] gi|223543956|gb|EEF45482.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/172 (78%), Positives = 147/172 (85%)
Query: 55 MATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG 114
MA FQV+ASS++GA EE SS VGENDLLIVGPGVLGRLVAE+WRQEHPGCQ+YG
Sbjct: 1 MANPFQVSASSTMGATNEELDAVSSSLVGENDLLIVGPGVLGRLVAEKWRQEHPGCQVYG 60
Query: 115 QTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGS 174
QT+T DHHDELI +GI PSLK T+ +FPYVIFCAPPSR+ DYPGDVR AALSWNGEGS
Sbjct: 61 QTLTTDHHDELIKIGINPSLKGTKPIHQFPYVIFCAPPSRTSDYPGDVREAALSWNGEGS 120
Query: 175 FLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLR 226
FLFTSSSA YDC DNG CDEDSPVVPIGRSPRTDVLLKAEKV+LE GCV +
Sbjct: 121 FLFTSSSAPYDCYDNGDCDEDSPVVPIGRSPRTDVLLKAEKVVLESDGCVYK 172
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356512227|ref|XP_003524822.1| PREDICTED: uncharacterized protein LOC100804718 [Glycine max] | Back alignment and taxonomy information |
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Score = 272 bits (696), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 163/223 (73%), Gaps = 10/223 (4%)
Query: 9 TVSLNGACTRFFAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMATNFQVTASSSIG 68
T+ N C RF ++S NR +KL +S S S AT+ +V+ ++
Sbjct: 25 TLCDNFRCLRFLTPKPPHLRSSHSKLGNR---VKL-----TSFSMSKATHLKVSQAALSS 76
Query: 69 AVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128
+ +GE+DLLIVGPGVLGRLVA++W QE PG Q+YGQT+T DHH+ELI M
Sbjct: 77 TEESLSSSPRV--IGEHDLLIVGPGVLGRLVAQKWSQELPGSQVYGQTVTTDHHNELIQM 134
Query: 129 GITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSD 188
GI PSLKWTEAT KFP VI+CAPPSR+ DY G++RLAALSWNGEGSFLFTSSSA YDC+D
Sbjct: 135 GINPSLKWTEATHKFPNVIYCAPPSRTPDYAGNIRLAALSWNGEGSFLFTSSSAPYDCND 194
Query: 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLY 231
NG CDEDSPVVPIGRSPR DVLLKAE V+LEFGGCV+RLAGLY
Sbjct: 195 NGPCDEDSPVVPIGRSPRVDVLLKAENVVLEFGGCVVRLAGLY 237
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356524994|ref|XP_003531112.1| PREDICTED: uncharacterized protein LOC100776260 [Glycine max] | Back alignment and taxonomy information |
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Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/223 (61%), Positives = 159/223 (71%), Gaps = 10/223 (4%)
Query: 9 TVSLNGACTRFFAADSLSSKASSVFFNNRTWKLKLRPLVASSSSSSMATNFQVTASSSIG 68
T+ N C RF ++S NR A +S SM+ Q+ S
Sbjct: 25 TLCDNVRCLRFLTPKPPHLRSSHSNLGNR----------AQLTSFSMSKATQLKVSQDAL 74
Query: 69 AVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM 128
+ E+ +S +GE+DLLIVGPGVLGRLVA++WRQE PG Q+YGQT++ DHH+ELI M
Sbjct: 75 SSTEQSLSSSPRVIGEHDLLIVGPGVLGRLVAQKWRQEIPGSQVYGQTVSTDHHNELIQM 134
Query: 129 GITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSD 188
GI PS KWTEAT FP VI+CAPPSR+ DY G+VRLAALSWNGEGSFLFTSSSA YDC+D
Sbjct: 135 GINPSKKWTEATHTFPNVIYCAPPSRTPDYAGNVRLAALSWNGEGSFLFTSSSAPYDCND 194
Query: 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLY 231
NG CDEDSPVVPIGRSP DVLLKAE V+LEFGGCVLRLAGLY
Sbjct: 195 NGPCDEDSPVVPIGRSPGVDVLLKAENVVLEFGGCVLRLAGLY 237
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Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297827493|ref|XP_002881629.1| hypothetical protein ARALYDRAFT_903150 [Arabidopsis lyrata subsp. lyrata] gi|297327468|gb|EFH57888.1| hypothetical protein ARALYDRAFT_903150 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 141/230 (61%), Positives = 164/230 (71%), Gaps = 3/230 (1%)
Query: 1 MGTISCTNTVSLNGA--CTRFFAADSLSSKASSVFFNNRTWKLKLRP-LVASSSSSSMAT 57
MG ISC + + N T F+ S S + S+ F R + K + S+SS MAT
Sbjct: 1 MGFISCISYPTTNSKILSTHHFSKQSTSPSSFSLKFALRREEDKPKSSFFLPSTSSKMAT 60
Query: 58 NFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117
Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP CQI GQT+
Sbjct: 61 PIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPECQIVGQTV 120
Query: 118 TADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFLF 177
T +HHDEL +GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WNGEGSFLF
Sbjct: 121 TTNHHDELEKLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFLF 180
Query: 178 TSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRL 227
TSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRL
Sbjct: 181 TSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRL 230
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147774573|emb|CAN63394.1| hypothetical protein VITISV_001889 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/182 (67%), Positives = 144/182 (79%)
Query: 45 PLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWR 104
P + S S T +V+ASS++GA EE + +S G VGENDLLIVGPGVLGRLVAE+WR
Sbjct: 42 PSFRAKRSVSTDTRLRVSASSTLGAPNEEMETSSFGLVGENDLLIVGPGVLGRLVAEKWR 101
Query: 105 QEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRL 164
+EHPGCQIYGQTMT DHHDEL+ +GI PSLK + T +FPYVIFCAPPS + DYP DVRL
Sbjct: 102 EEHPGCQIYGQTMTTDHHDELVKIGINPSLKGVKTTHQFPYVIFCAPPSXTSDYPADVRL 161
Query: 165 AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224
AA +W+GEGSFLFTSSSA +DC+DNG+CDED PVVPIGRSPRTDVLL AEK +
Sbjct: 162 AASNWSGEGSFLFTSSSAPFDCNDNGSCDEDGPVVPIGRSPRTDVLLNAEKDAASLAVAI 221
Query: 225 LR 226
L+
Sbjct: 222 LK 223
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51970960|dbj|BAD44172.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/181 (71%), Positives = 146/181 (80%)
Query: 51 SSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGC 110
+SS MAT Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP
Sbjct: 55 TSSLMATPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPES 114
Query: 111 QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWN 170
QI+GQT+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WN
Sbjct: 115 QIFGQTVTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWN 174
Query: 171 GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGL 230
GEGSFLFTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGL
Sbjct: 175 GEGSFLFTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGL 234
Query: 231 Y 231
Y
Sbjct: 235 Y 235
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Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 267 | ||||||
| TAIR|locus:2065001 | 351 | EMB2799 "EMBRYO DEFECTIVE 2799 | 0.865 | 0.658 | 0.604 | 4.5e-66 |
| TAIR|locus:2065001 EMB2799 "EMBRYO DEFECTIVE 2799" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 672 (241.6 bits), Expect = 4.5e-66, P = 4.5e-66
Identities = 142/235 (60%), Positives = 167/235 (71%)
Query: 1 MGTISCTNTVSLNGAC--TRFFAADSLSSKAS-SVFFNNRTWKLKLR-PLVAXXXXXXMA 56
MG ISC + ++N T F+ S S+ +S S+ F R + K + MA
Sbjct: 1 MGFISCISFPTINSRILSTHHFSKHSTSASSSYSLKFALRRQEDKPKVSFFLPLTSSLMA 60
Query: 57 TNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116
T Q ++SS+IG + K S +G NDLLIVGPGVLGRLVAEQWRQEHP QI+GQT
Sbjct: 61 TPIQASSSSTIGETSDGLKVQSHVSIGANDLLIVGPGVLGRLVAEQWRQEHPESQIFGQT 120
Query: 117 MTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPGDVRLAALSWNGEGSFL 176
+T +HH EL N+GI PSLK TE KF YVIFCAPPS+S DY G+VR AA +WNGEGSFL
Sbjct: 121 VTTNHHGELENLGIKPSLKGTEYGGKFSYVIFCAPPSQSADYAGEVRNAASNWNGEGSFL 180
Query: 177 FTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLY 231
FTSSSA YDC DNG C+EDSPVVP+G+SPRTDVLLKAEKV+LE GG VLRLAGLY
Sbjct: 181 FTSSSAPYDCFDNGECNEDSPVVPLGKSPRTDVLLKAEKVVLECGGTVLRLAGLY 235
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 267 261 0.00090 114 3 11 22 0.46 33
32 0.49 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 620 (66 KB)
Total size of DFA: 219 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.12u 0.14s 21.26t Elapsed: 00:00:02
Total cpu time: 21.12u 0.14s 21.26t Elapsed: 00:00:03
Start: Fri May 10 10:01:05 2013 End: Fri May 10 10:01:08 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 267 | |||
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 5e-12 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 5e-12
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 22/160 (13%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----SLKWTEATQK 142
+LI+G G LG+ +A Q + G Q+ G T + + G+TP +
Sbjct: 1 VLILGCGYLGQRLARQLLAQ--GWQVTGTTRSPEKLAADRPAGVTPLAADLTQPGLL-AD 57
Query: 143 FPYVIFCAPPSRSLDYPG-DVRLAAL-----SWNGEGSFLFTSSSAIY-DCSDNGAC-DE 194
+++ PP G D L AL ++ SS+ +Y D G DE
Sbjct: 58 VDHLVISLPPPAGSYRGGYDPGLRALLDALAQLPAVQRVIYLSSTGVYGDQ--QGEWVDE 115
Query: 195 DSPVVPIGRSPRTDVLLKAEKVILEFGG---CVLRLAGLY 231
SP P + LL+AE+ +L G +LRLAG+Y
Sbjct: 116 TSPPNP--STESGRALLEAEQALLALGSKPTTILRLAGIY 153
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 267 | |||
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.89 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.87 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.87 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.87 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.86 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.85 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.85 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.85 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.84 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.84 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.83 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.83 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.82 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.82 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.82 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.82 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.82 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.81 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.81 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.81 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.8 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.79 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.79 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.79 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.79 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.79 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.78 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.78 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.77 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.77 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.77 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.77 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.76 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.76 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.76 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.76 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.76 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.76 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.75 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.75 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.75 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.75 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.75 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.74 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.73 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.71 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.7 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.69 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.69 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.68 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.67 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.66 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.65 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.65 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.61 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.6 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.57 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.57 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.56 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.5 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.49 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.48 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.48 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.45 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.44 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.4 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.36 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.33 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.24 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.21 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.2 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.19 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.18 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.16 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.15 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.15 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.15 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.15 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.12 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.12 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.12 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.12 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.12 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.11 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.11 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.11 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.11 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.1 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.08 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.07 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.07 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.06 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.05 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.04 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.02 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.01 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.01 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.01 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 98.99 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 98.99 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.97 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.97 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.97 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.97 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.97 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 98.96 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.95 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.93 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.93 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.93 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.92 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.91 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.91 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.89 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.89 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.88 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 98.87 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.87 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.87 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.87 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.87 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.87 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.87 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.86 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.86 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.86 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.85 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 98.84 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.84 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.84 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.83 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.82 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.82 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.81 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.81 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.81 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.8 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 98.8 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.8 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.77 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.77 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.76 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.75 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 98.75 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.74 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.73 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.73 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.72 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.71 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.71 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.7 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.69 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 98.69 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.68 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.67 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 98.67 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.67 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.66 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.66 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.65 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.63 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.62 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.62 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.62 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.62 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.62 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.61 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.59 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.57 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.57 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.56 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.47 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.45 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 98.45 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.43 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.42 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.39 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.38 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.36 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.35 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.34 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.33 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.31 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.29 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.27 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.26 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.25 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.22 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.22 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.21 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 98.21 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 98.2 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.2 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.19 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.18 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 98.18 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 98.17 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.11 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.09 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.08 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.07 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.06 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.06 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.04 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.02 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.99 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.97 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.96 | |
| PLN00015 | 308 | protochlorophyllide reductase | 97.96 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.95 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.94 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.94 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.93 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.92 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.91 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.91 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.88 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.88 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.87 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.85 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.85 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 97.84 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.82 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 97.82 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.81 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.81 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.79 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.78 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.76 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.74 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.7 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.69 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 97.68 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.67 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 97.66 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 97.61 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 97.61 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.6 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.59 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 97.58 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.56 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.56 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 97.55 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.53 | |
| PLN00106 | 323 | malate dehydrogenase | 97.52 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 97.52 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.51 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.51 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.5 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.5 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.49 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.48 | |
| PLN02712 | 667 | arogenate dehydrogenase | 97.48 | |
| PRK08507 | 275 | prephenate dehydrogenase; Validated | 97.46 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.45 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.44 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 97.43 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.43 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.42 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.42 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.41 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 97.41 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.41 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.4 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.4 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.4 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.4 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 97.38 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.38 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.37 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.36 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.35 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.33 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 97.32 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.32 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 97.31 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.3 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 97.3 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.28 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 97.26 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 97.25 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.24 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 97.24 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.24 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.23 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 97.23 | |
| COG0677 | 436 | WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas | 97.22 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 97.21 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.2 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.2 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 97.2 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.19 | |
| PLN02256 | 304 | arogenate dehydrogenase | 97.18 | |
| KOG0409 | 327 | consensus Predicted dehydrogenase [General functio | 97.17 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.17 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 97.13 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 97.13 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.12 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 97.11 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.09 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.08 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.08 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 97.08 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.06 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.05 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.05 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.05 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 97.03 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.03 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.02 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.0 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 96.99 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.99 | |
| PRK06476 | 258 | pyrroline-5-carboxylate reductase; Reviewed | 96.99 | |
| PLN02712 | 667 | arogenate dehydrogenase | 96.99 | |
| PRK07634 | 245 | pyrroline-5-carboxylate reductase; Reviewed | 96.98 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.96 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.96 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.95 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 96.95 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.94 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.92 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.87 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 96.87 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.86 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.85 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 96.84 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 96.84 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.84 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.84 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.84 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 96.84 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.83 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.81 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.81 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.79 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.78 | |
| PLN02858 | 1378 | fructose-bisphosphate aldolase | 96.78 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 96.76 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 96.75 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 96.74 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.74 | |
| PRK05479 | 330 | ketol-acid reductoisomerase; Provisional | 96.73 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.72 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.7 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.69 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.69 | |
| TIGR00465 | 314 | ilvC ketol-acid reductoisomerase. This is the seco | 96.67 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.64 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 96.63 | |
| PRK06436 | 303 | glycerate dehydrogenase; Provisional | 96.62 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 96.6 | |
| PRK08605 | 332 | D-lactate dehydrogenase; Validated | 96.59 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.57 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 96.55 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 96.53 | |
| PRK08268 | 507 | 3-hydroxy-acyl-CoA dehydrogenase; Validated | 96.52 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.52 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.51 | |
| COG0345 | 266 | ProC Pyrroline-5-carboxylate reductase [Amino acid | 96.49 | |
| TIGR00873 | 467 | gnd 6-phosphogluconate dehydrogenase, decarboxylat | 96.47 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.46 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 96.46 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 96.45 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.43 | |
| COG1893 | 307 | ApbA Ketopantoate reductase [Coenzyme metabolism] | 96.42 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.42 | |
| TIGR02279 | 503 | PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa | 96.42 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.41 | |
| PRK01710 | 458 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.39 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.38 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 96.37 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.37 | |
| PRK13301 | 267 | putative L-aspartate dehydrogenase; Provisional | 96.37 | |
| TIGR01921 | 324 | DAP-DH diaminopimelate dehydrogenase. This model r | 96.35 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 96.35 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.35 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.34 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 96.34 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.34 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 96.33 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 96.33 | |
| PRK12439 | 341 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.31 | |
| COG0111 | 324 | SerA Phosphoglycerate dehydrogenase and related de | 96.3 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.3 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.3 | |
| PTZ00431 | 260 | pyrroline carboxylate reductase; Provisional | 96.3 | |
| COG1023 | 300 | Gnd Predicted 6-phosphogluconate dehydrogenase [Ca | 96.29 | |
| PLN02494 | 477 | adenosylhomocysteinase | 96.29 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.29 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.28 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.26 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 96.25 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.23 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.23 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.23 | |
| PRK13581 | 526 | D-3-phosphoglycerate dehydrogenase; Provisional | 96.23 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 96.23 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.22 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.22 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.2 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.19 | |
| TIGR01327 | 525 | PGDH D-3-phosphoglycerate dehydrogenase. This mode | 96.19 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 96.18 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 96.15 | |
| PRK01390 | 460 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.14 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.14 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.14 | |
| TIGR01724 | 341 | hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome | 96.08 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.08 | |
| PLN02928 | 347 | oxidoreductase family protein | 96.07 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 96.07 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.06 | |
| PRK12409 | 410 | D-amino acid dehydrogenase small subunit; Provisio | 96.06 | |
| PRK00683 | 418 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.05 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.05 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.03 | |
| PRK00421 | 461 | murC UDP-N-acetylmuramate--L-alanine ligase; Provi | 96.03 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.01 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 96.0 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 95.97 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.96 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 95.96 | |
| PRK08410 | 311 | 2-hydroxyacid dehydrogenase; Provisional | 95.87 | |
| PRK06141 | 314 | ornithine cyclodeaminase; Validated | 95.83 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.82 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 95.82 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 95.78 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 95.77 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.72 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 95.68 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 95.66 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.65 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.62 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 95.57 | |
| PRK15409 | 323 | bifunctional glyoxylate/hydroxypyruvate reductase | 95.56 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 95.52 | |
| PRK12557 | 342 | H(2)-dependent methylenetetrahydromethanopterin de | 95.51 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 95.49 |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3e-22 Score=185.28 Aligned_cols=178 Identities=16% Similarity=0.090 Sum_probs=126.2
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhc-------cC---eeeecCCc----cccCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-------MG---ITPSLKWT----EATQK 142 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~-------~~---v~~d~~d~----~~~~~ 142 (267)
..||+|||||+ ||||++|+++|+++ |++|++++|....... +.. .. +..|+.|. +.+++
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFL--NQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 44689999995 99999999999999 9999999986532111 100 01 23455554 24578
Q ss_pred CCEEEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 143 FPYVIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
+|+|||+|+..... + ++.++.+++. ...++++|||+||++|||...+.+.+|+++..|. +.|+.+
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~--~~Y~~s 168 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPL--SPYAVT 168 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCC--ChhhHH
Confidence 99999999854321 1 2344556653 2347899999999999997655667787776664 689999
Q ss_pred HHHHHHHHHHc----C--eeEEeeCccccCCc-----------hHHHHH-hCCcceec-CCCccccHHHHHHh
Q 024494 210 LLKAEKVILEF----G--GCVLRLAGLYISLC-----------YLVEKF-QGLPLLLK-SPGIFSANWHYICV 263 (267)
Q Consensus 210 k~~aE~~l~~~----~--~~IlR~~~iyGp~~-----------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~ 263 (267)
|+++|++++.+ + ++++||+++|||+. .++..+ +|+++.+. ++.+..++||..++
T Consensus 169 K~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~ 241 (348)
T PRK15181 169 KYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENV 241 (348)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHH
Confidence 99999987654 3 89999999999962 123333 47776654 44567888886544
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-21 Score=172.35 Aligned_cols=146 Identities=18% Similarity=0.208 Sum_probs=114.8
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhc---cCeeeecCCcc------ccCCCCEEEEccCCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN---MGITPSLKWTE------ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~---~~v~~d~~d~~------~~~~~D~Vi~~a~~~ 153 (267)
|+||||| +||||+|.+.+|++. |++|+++|.-... ...+.. .-+..|+.|.+ ...++|+|||.|+..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~--G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~ 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKT--GHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHC--CCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence 6899997 799999999999999 9999999984332 223322 23455777752 335899999999965
Q ss_pred CCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024494 154 RSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 154 ~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
..++ ++.++.+++. ...++++|||-||+.|||.+...|++|+.|..|. ++||++|+..|++++++
T Consensus 79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~--NPYG~sKlm~E~iL~d~ 156 (329)
T COG1087 79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPI--NPYGRSKLMSEEILRDA 156 (329)
T ss_pred ccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCC--CcchhHHHHHHHHHHHH
Confidence 4332 2334455543 3458999999999999999988899999999985 79999999999999876
Q ss_pred C------eeEEeeCccccCC
Q 024494 221 G------GCVLRLAGLYISL 234 (267)
Q Consensus 221 ~------~~IlR~~~iyGp~ 234 (267)
. +++||.+++-|..
T Consensus 157 ~~a~~~~~v~LRYFN~aGA~ 176 (329)
T COG1087 157 AKANPFKVVILRYFNVAGAC 176 (329)
T ss_pred HHhCCCcEEEEEecccccCC
Confidence 3 8999999998875
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.7e-21 Score=174.62 Aligned_cols=152 Identities=13% Similarity=0.159 Sum_probs=112.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRSLD 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~~~~ 157 (267)
|||||||+ ||||++|+++|+++ | +|++++|.... +..|+.|++ .+. ++|+|||||+....+.
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~--g-~V~~~~~~~~~--------~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~ 69 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPL--G-NLIALDVHSTD--------YCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVDK 69 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhcc--C-CEEEecccccc--------ccCCCCCHHHHHHHHHhcCCCEEEECCccCCcch
Confidence 58999996 99999999999999 8 79999886421 234555542 233 6899999998754321
Q ss_pred -----------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--e
Q 024494 158 -----------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (267)
Q Consensus 158 -----------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~ 222 (267)
+..++.+++.+ ..+ .+|||+||..|||.....+++|++|..|. +.|+++|+++|++++.+. +
T Consensus 70 ~~~~~~~~~~~N~~~~~~l~~aa~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~--~~Yg~sK~~~E~~~~~~~~~~ 146 (299)
T PRK09987 70 AESEPEFAQLLNATSVEAIAKAANEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPL--NVYGETKLAGEKALQEHCAKH 146 (299)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEccceEECCCCCCCcCCCCCCCCC--CHHHHHHHHHHHHHHHhCCCE
Confidence 22334455432 234 48999999999987766689999988884 689999999999998875 8
Q ss_pred eEEeeCccccCC-c----hHHHHHh-CCcceecC
Q 024494 223 CVLRLAGLYISL-C----YLVEKFQ-GLPLLLKS 250 (267)
Q Consensus 223 ~IlR~~~iyGp~-~----~~l~~~~-g~~v~~~~ 250 (267)
+|+|++++|||+ . .+++.+. ++++.+.+
T Consensus 147 ~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~ 180 (299)
T PRK09987 147 LIFRTSWVYAGKGNNFAKTMLRLAKEREELSVIN 180 (299)
T ss_pred EEEecceecCCCCCCHHHHHHHHHhcCCCeEEeC
Confidence 999999999997 2 3444453 66665544
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.4e-21 Score=174.84 Aligned_cols=170 Identities=24% Similarity=0.225 Sum_probs=119.5
Q ss_pred EEEc-ccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCch--hhhcc----CeeeecCCc----cccCCCCEEEEccCCCC
Q 024494 88 LIVG-PGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD--ELINM----GITPSLKWT----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 88 LV~G-aG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~--~l~~~----~v~~d~~d~----~~~~~~D~Vi~~a~~~~ 154 (267)
|||| +||||++|+++|+++ | ++|.++++.+.... .+... -+..|+.|. ++++++|+|||+|++..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~--g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~ 78 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLER--GYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVP 78 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHC--CCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccc
Confidence 6887 599999999999999 8 79999998764322 22222 235677765 47899999999998643
Q ss_pred CC--C--------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCC--CC--ccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024494 155 SL--D--------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSD--NG--ACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 155 ~~--~--------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~--~~--~~~E~~p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
.. . +++++++++.+ ..+++||||+||.+|+++.. .. ..+|+.|..+.....|+++|..+|++++
T Consensus 79 ~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~ 158 (280)
T PF01073_consen 79 PWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVL 158 (280)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHH
Confidence 21 1 45677787643 35899999999999998622 12 2477777655445689999999999988
Q ss_pred HcC-----------eeEEeeCccccCCc-----hHHHHHh-CCcc-eecCCCccccHHH
Q 024494 219 EFG-----------GCVLRLAGLYISLC-----YLVEKFQ-GLPL-LLKSPGIFSANWH 259 (267)
Q Consensus 219 ~~~-----------~~IlR~~~iyGp~~-----~~l~~~~-g~~v-~~~~~~~~~n~IH 259 (267)
++. +++|||+.||||+. .+++.++ |... .++++....+++|
T Consensus 159 ~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vy 217 (280)
T PF01073_consen 159 EANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVY 217 (280)
T ss_pred hhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEe
Confidence 752 68999999999993 3445554 5333 3333333344443
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=176.40 Aligned_cols=182 Identities=13% Similarity=0.062 Sum_probs=119.5
Q ss_pred CCCCCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-------cCe---eeecCCc----cccCCCC
Q 024494 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-------MGI---TPSLKWT----EATQKFP 144 (267)
Q Consensus 81 ~~~m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-------~~v---~~d~~d~----~~~~~~D 144 (267)
...+|+|||||+ ||||++|+++|+++ | ++|++++|+.++...+.. .++ ..|+.|. +.+.++|
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~--~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d 88 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTE--TPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD 88 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhc--CCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence 344589999995 99999999999997 5 899999987654433221 123 2355554 3466899
Q ss_pred EEEEccCCCCCC----C-------hHHHHHHHHHH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCC------------
Q 024494 145 YVIFCAPPSRSL----D-------YPGDVRLAALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP------------ 200 (267)
Q Consensus 145 ~Vi~~a~~~~~~----~-------~~~~~~~l~~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p------------ 200 (267)
+|||||+..... + +..+..+++.+ ....++|||+||..|||.....+++|+.|..+
T Consensus 89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~ 168 (386)
T PLN02427 89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDES 168 (386)
T ss_pred EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCccccccccccccccccccc
Confidence 999999853321 1 11222333322 12238999999999999754444444443211
Q ss_pred --------CCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCch--------------HH----HHH-hCCcce
Q 024494 201 --------IGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLCY--------------LV----EKF-QGLPLL 247 (267)
Q Consensus 201 --------~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~~--------------~l----~~~-~g~~v~ 247 (267)
.+.+.|+.+|..+|+++..+ + ++|+||+++|||+.. ++ ..+ +++++.
T Consensus 169 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 248 (386)
T PLN02427 169 PCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLK 248 (386)
T ss_pred ccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeE
Confidence 01247999999999998764 3 899999999999731 12 333 477765
Q ss_pred ecC-CCccccHHHHHHhh
Q 024494 248 LKS-PGIFSANWHYICVK 264 (267)
Q Consensus 248 ~~~-~~~~~n~IH~~~~~ 264 (267)
+.+ +.+..++||.-+++
T Consensus 249 ~~g~g~~~r~~i~V~Dva 266 (386)
T PLN02427 249 LVDGGQSQRTFVYIKDAI 266 (386)
T ss_pred EECCCCceECcEeHHHHH
Confidence 544 34667888876554
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.9e-20 Score=177.48 Aligned_cols=175 Identities=15% Similarity=0.119 Sum_probs=120.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhh----ccCeee---ecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI----NMGITP---SLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~----~~~v~~---d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.|||||||+ ||||++|+++|+++ |++|++++|.... ...+. ...++. |+.+. .+.++|+|||||+...
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~--G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-~~~~~D~ViHlAa~~~ 196 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGR--GDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-ILLEVDQIYHLACPAS 196 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-cccCCCEEEECceecc
Confidence 389999995 99999999999999 9999999985322 11111 012222 22222 3568999999998543
Q ss_pred CC----C-------hHHHHHHHHHHh--CCCCcEEEEcCCccccCCCCCccCCCC-----CCCCCCCCHHHHHHHHHHHH
Q 024494 155 SL----D-------YPGDVRLAALSW--NGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 155 ~~----~-------~~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~-----p~~p~~~~~y~~~k~~aE~~ 216 (267)
.. + ++.++.+++.+. .+ .+|||+||..|||.....+.+|+. |..| .+.|+.+|..+|++
T Consensus 197 ~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p--~s~Yg~SK~~aE~~ 273 (436)
T PLN02166 197 PVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGE--RSCYDEGKRTAETL 273 (436)
T ss_pred chhhccCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECcHHHhCCCCCCCCCccccccCCCCCC--CCchHHHHHHHHHH
Confidence 21 1 234455554322 34 489999999999976556777763 4444 35799999999999
Q ss_pred HHHc----C--eeEEeeCccccCCc---------hHHHHH-hCCcceecC-CCccccHHHHHHhh
Q 024494 217 ILEF----G--GCVLRLAGLYISLC---------YLVEKF-QGLPLLLKS-PGIFSANWHYICVK 264 (267)
Q Consensus 217 l~~~----~--~~IlR~~~iyGp~~---------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~~ 264 (267)
++.+ + ++++|++++|||+. .++.++ +++++.+.+ +.++.++||..+++
T Consensus 274 ~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva 338 (436)
T PLN02166 274 AMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLV 338 (436)
T ss_pred HHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHH
Confidence 8765 3 89999999999972 233444 577765543 44788999976654
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=172.82 Aligned_cols=179 Identities=16% Similarity=0.153 Sum_probs=121.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe---eeecC-Cc----cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI---TPSLK-WT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v---~~d~~-d~----~~~~~~D~Vi~~a~~~ 153 (267)
||+|||||+ ||||++|+++|+++. |++|++++|+..+...+.. .++ ..|+. +. +.++++|+|||+|+..
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~-~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~ 79 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETT-DWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIA 79 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCC-CCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence 689999996 999999999999851 6999999997654333321 223 33554 32 2456899999999854
Q ss_pred CCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCC---CC--CCCCHHHHHHHHHHH
Q 024494 154 RSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VP--IGRSPRTDVLLKAEK 215 (267)
Q Consensus 154 ~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~---~p--~~~~~y~~~k~~aE~ 215 (267)
... + ++.+..+++.+ ..+ ++|||+||+.|||...+.+++|+.+. .| .+.+.|+.+|.++|+
T Consensus 80 ~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~ 158 (347)
T PRK11908 80 TPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDR 158 (347)
T ss_pred ChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHH
Confidence 221 1 13344455432 234 79999999999997554566666432 11 113589999999999
Q ss_pred HHHHc----C--eeEEeeCccccCCc---------------hHHHHH-hCCcceecC-CCccccHHHHHHhh
Q 024494 216 VILEF----G--GCVLRLAGLYISLC---------------YLVEKF-QGLPLLLKS-PGIFSANWHYICVK 264 (267)
Q Consensus 216 ~l~~~----~--~~IlR~~~iyGp~~---------------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~~ 264 (267)
+++.+ + ++++||+++|||+. .++.++ +|.++.+.+ +.+..++||.-+++
T Consensus 159 ~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a 230 (347)
T PRK11908 159 VIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGI 230 (347)
T ss_pred HHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHH
Confidence 98764 3 89999999999962 233444 477765543 45788999977654
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=173.88 Aligned_cols=173 Identities=21% Similarity=0.233 Sum_probs=124.6
Q ss_pred CCCCCCCeEEEE----cc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-----------hhhccCeee---ecCCcc-
Q 024494 79 SGGVGENDLLIV----GP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMGITP---SLKWTE- 138 (267)
Q Consensus 79 ~~~~~m~~ILV~----Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-----------~l~~~~v~~---d~~d~~- 138 (267)
....++++|||+ |+ |+||++|+++|+++ ||+|++++|++.... ++...+++. |+.|.+
T Consensus 47 ~~~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~ 124 (378)
T PLN00016 47 AAAVEKKKVLIVNTNSGGHAFIGFYLAKELVKA--GHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKS 124 (378)
T ss_pred hcccccceEEEEeccCCCceeEhHHHHHHHHHC--CCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHh
Confidence 334566899999 96 99999999999999 999999999865422 111223443 333321
Q ss_pred --ccCCCCEEEEccCCCCCCChHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 139 --ATQKFPYVIFCAPPSRSLDYPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~~~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
...++|+|||+++.. ....++++.+ ..++++|||+||.++||.....+..|+.+..|. . .|.++|
T Consensus 125 ~~~~~~~d~Vi~~~~~~-----~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~--~----sK~~~E 193 (378)
T PLN00016 125 KVAGAGFDVVYDNNGKD-----LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPK--A----GHLEVE 193 (378)
T ss_pred hhccCCccEEEeCCCCC-----HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCc--c----hHHHHH
Confidence 235799999997542 3345555432 358999999999999997665677888777663 1 688999
Q ss_pred HHHHHcC--eeEEeeCccccCCc------hHHHHH-hCCcceecC-CCccccHHHHHHhh
Q 024494 215 KVILEFG--GCVLRLAGLYISLC------YLVEKF-QGLPLLLKS-PGIFSANWHYICVK 264 (267)
Q Consensus 215 ~~l~~~~--~~IlR~~~iyGp~~------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~~ 264 (267)
+++++.+ ++|+||+++||++. +++.++ ++.++.+++ +.++.+++|.-+++
T Consensus 194 ~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva 253 (378)
T PLN00016 194 AYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLA 253 (378)
T ss_pred HHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHH
Confidence 9998876 99999999999972 355666 477766554 44778888866553
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.4e-21 Score=172.47 Aligned_cols=163 Identities=20% Similarity=0.266 Sum_probs=106.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc------ccCCCCEEEEccCCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE------ATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~------~~~~~D~Vi~~a~~~~~~~ 157 (267)
|||||+|+ |+||++|.+.|.++ |++|++++|. ..|+.|.+ .-.++|+|||||+....+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~--~~~v~~~~r~------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~~ 66 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKER--GYEVIATSRS------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVDA 66 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTT--SEEEEEESTT------------CS-TTSHHHHHHHHHHH--SEEEE------HHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhC--CCEEEEeCch------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHHh
Confidence 79999996 99999999999998 9999999887 22333321 1236999999998765321
Q ss_pred -----------hHHHHHHHHHHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ee
Q 024494 158 -----------YPGDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (267)
Q Consensus 158 -----------~~~~~~~l~~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~ 223 (267)
++....+++... ....++||+||..||++..+.+.+|++++.|. +.||++|+++|+.+++.. ++
T Consensus 67 ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~--~~YG~~K~~~E~~v~~~~~~~~ 144 (286)
T PF04321_consen 67 CEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPL--NVYGRSKLEGEQAVRAACPNAL 144 (286)
T ss_dssp HHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----S--SHHHHHHHHHHHHHHHH-SSEE
T ss_pred hhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCC--CHHHHHHHHHHHHHHHhcCCEE
Confidence 223334443322 23469999999999987766789999998885 799999999999999853 99
Q ss_pred EEeeCccccCC-c----hHHHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 224 VLRLAGLYISL-C----YLVEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 224 IlR~~~iyGp~-~----~~l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
|+|++.+||+. . ++++.++ ++++.+. .+++.+++|..++|
T Consensus 145 IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~-~d~~~~p~~~~dlA 190 (286)
T PF04321_consen 145 ILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLF-DDQYRSPTYVDDLA 190 (286)
T ss_dssp EEEE-SEESSSSSSHHHHHHHHHHCTSEEEEE-SSCEE--EEHHHHH
T ss_pred EEecceecccCCCchhhhHHHHHhcCCeeEee-CCceeCCEEHHHHH
Confidence 99999999995 2 4455564 7777665 45677877766554
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.6e-21 Score=163.88 Aligned_cols=174 Identities=23% Similarity=0.295 Sum_probs=127.3
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC---eeeecCCcc----ccC--CCCEEEEccCCCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG---ITPSLKWTE----ATQ--KFPYVIFCAPPSRS 155 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~---v~~d~~d~~----~~~--~~D~Vi~~a~~~~~ 155 (267)
|||+|+ ||||++|+++|+++ |++|+.++|++........ .+ ...|+.|.+ .++ ++|+|||+|+....
T Consensus 1 IlI~GatG~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~ 78 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKK--GHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSN 78 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSH
T ss_pred EEEEccCCHHHHHHHHHHHHc--CCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccc
Confidence 799995 99999999999999 9999999998766532221 13 234555542 222 56999999997531
Q ss_pred ----CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc--
Q 024494 156 ----LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-- 220 (267)
Q Consensus 156 ----~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-- 220 (267)
.. +....++++. ...++++||++||..+|+...+.+++|+++..| .++|+.+|...|++++.+
T Consensus 79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~--~~~Y~~~K~~~e~~~~~~~~ 156 (236)
T PF01370_consen 79 PESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINP--LSPYGASKRAAEELLRDYAK 156 (236)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCH--SSHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccc
Confidence 01 2223334432 234679999999999999987778899998877 468999999999998865
Q ss_pred --C--eeEEeeCccccCC------c----hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 221 --G--GCVLRLAGLYISL------C----YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 221 --~--~~IlR~~~iyGp~------~----~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
+ ++++||+.+|||+ . .++..+ +|+++.++ ++.++.+++|..+++
T Consensus 157 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a 216 (236)
T PF01370_consen 157 KYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLA 216 (236)
T ss_dssp HHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHH
T ss_pred ccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHH
Confidence 3 8999999999999 1 244555 47766554 456889999976554
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=168.20 Aligned_cols=176 Identities=16% Similarity=0.107 Sum_probs=119.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCcc----ccCCCCEEEEccCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWTE----ATQKFPYVIFCAPPSRS- 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~----~~~~~D~Vi~~a~~~~~- 155 (267)
|+|||||+ ||||++|++.|.++ ||+|++++|............ +..|+.|.+ .+.++|+|||+|+....
T Consensus 22 ~~IlVtGgtGfIG~~l~~~L~~~--G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~ 99 (370)
T PLN02695 22 LRICITGAGGFIASHIARRLKAE--GHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGM 99 (370)
T ss_pred CEEEEECCccHHHHHHHHHHHhC--CCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCc
Confidence 79999996 99999999999999 999999998643211100111 223555432 35689999999975321
Q ss_pred ----CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCC----CccCCCC--CCCCCCCCHHHHHHHHHHHH
Q 024494 156 ----LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN----GACDEDS--PVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 156 ----~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~----~~~~E~~--p~~p~~~~~y~~~k~~aE~~ 216 (267)
.+ +.....+++. ...++++|||+||..+||.... .+++|++ |..| .+.|+.+|.++|++
T Consensus 100 ~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p--~s~Yg~sK~~~E~~ 177 (370)
T PLN02695 100 GFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEP--QDAYGLEKLATEEL 177 (370)
T ss_pred cccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCC--CCHHHHHHHHHHHH
Confidence 01 2333445543 2347899999999999986532 1356655 5555 46899999999998
Q ss_pred HHHc----C--eeEEeeCccccCCc-----------hHHHHH-h-CCccee-cCCCccccHHHHHHhh
Q 024494 217 ILEF----G--GCVLRLAGLYISLC-----------YLVEKF-Q-GLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 217 l~~~----~--~~IlR~~~iyGp~~-----------~~l~~~-~-g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
++.+ + ++++||+++|||+. .++.++ + +.++.+ +.+.+..++||..+++
T Consensus 178 ~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a 245 (370)
T PLN02695 178 CKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECV 245 (370)
T ss_pred HHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHH
Confidence 7663 3 89999999999962 233333 3 455544 4455788888866543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=161.10 Aligned_cols=160 Identities=19% Similarity=0.174 Sum_probs=114.5
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccC--CCCEEEEccCCCCCC--
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRSL-- 156 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~--~~D~Vi~~a~~~~~~-- 156 (267)
||||+|+ |+||++++++|+++ |++|++++|.. .|+.|+ +.+. ++|+|||+++.....
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~--g~~v~~~~r~~------------~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 66 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPE--GRVVVALTSSQ------------LDLTDPEALERLLRAIRPDAVVNTAAYTDVDGA 66 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhc--CCEEEEeCCcc------------cCCCCHHHHHHHHHhCCCCEEEECCcccccccc
Confidence 5899995 99999999999999 99999999862 222222 1223 469999999864321
Q ss_pred --C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ee
Q 024494 157 --D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (267)
Q Consensus 157 --~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~ 223 (267)
. +.....+++.. ..+ .+||++||..||+.....+++|+++..|. +.|+++|.++|+.++.++ ++
T Consensus 67 ~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~--~~Y~~~K~~~E~~~~~~~~~~~ 143 (287)
T TIGR01214 67 ESDPEKAFAVNALAPQNLARAAARHG-ARLVHISTDYVFDGEGKRPYREDDATNPL--NVYGQSKLAGEQAIRAAGPNAL 143 (287)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCc--chhhHHHHHHHHHHHHhCCCeE
Confidence 1 12223444322 224 48999999999987666789999887763 689999999999999876 99
Q ss_pred EEeeCccccCC--chH----HHHHh-CCcceecCCCccccHHHHHHh
Q 024494 224 VLRLAGLYISL--CYL----VEKFQ-GLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 224 IlR~~~iyGp~--~~~----l~~~~-g~~v~~~~~~~~~n~IH~~~~ 263 (267)
|+||+++||++ +.+ ++.+. +.++.+.+ .++.+++|..++
T Consensus 144 ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~v~Dv 189 (287)
T TIGR01214 144 IVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD-DQIGSPTYAKDL 189 (287)
T ss_pred EEEeeecccCCCCCCHHHHHHHHhhcCCCceEec-CCCcCCcCHHHH
Confidence 99999999997 233 34443 55554433 356777776554
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-19 Score=166.09 Aligned_cols=177 Identities=16% Similarity=0.086 Sum_probs=119.8
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-----hhhc--cC---eeeecCCc----cccCCCCEE
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----ELIN--MG---ITPSLKWT----EATQKFPYV 146 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-----~l~~--~~---v~~d~~d~----~~~~~~D~V 146 (267)
.++|+|||||+ ||||++|+++|+++ |++|++++|+.+... .+.. .. +..|+.|. +.+.++|+|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 85 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLER--GYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGV 85 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEE
Confidence 34688999996 99999999999999 999999999765321 1111 01 23455554 356789999
Q ss_pred EEccCCCCCCC------hHHHHHHHHHH--hCCCCcEEEEcCC-ccccCCCC---CccCCCCC------CCCCCCCHHHH
Q 024494 147 IFCAPPSRSLD------YPGDVRLAALS--WNGEGSFLFTSSS-AIYDCSDN---GACDEDSP------VVPIGRSPRTD 208 (267)
Q Consensus 147 i~~a~~~~~~~------~~~~~~~l~~~--~~~v~r~V~~SS~-~VYg~~~~---~~~~E~~p------~~p~~~~~y~~ 208 (267)
||+|++...+. ++.++.+++.+ ..++++||++||. .+||.... .+++|+++ ..| .+.|+.
T Consensus 86 ih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p--~~~Y~~ 163 (342)
T PLN02214 86 FHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNT--KNWYCY 163 (342)
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhcccc--ccHHHH
Confidence 99998753221 23445555432 3478899999996 69975332 24788752 223 358999
Q ss_pred HHHHHHHHHHHc----C--eeEEeeCccccCCch---------HHHHHhCCcceecCCCccccHHHHHHhh
Q 024494 209 VLLKAEKVILEF----G--GCVLRLAGLYISLCY---------LVEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 209 ~k~~aE~~l~~~----~--~~IlR~~~iyGp~~~---------~l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+|..+|++++.+ + ++++||+++|||+.. ++..+.|..... +.+..++||.-+++
T Consensus 164 sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~i~V~Dva 232 (342)
T PLN02214 164 GKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY--ANLTQAYVDVRDVA 232 (342)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccC--CCCCcCeeEHHHHH
Confidence 999999998764 3 899999999999831 122234443322 23466888866554
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.4e-19 Score=171.45 Aligned_cols=178 Identities=12% Similarity=0.031 Sum_probs=115.6
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-----------------hhhh------ccCe---eeec
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----------------DELI------NMGI---TPSL 134 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-----------------~~l~------~~~v---~~d~ 134 (267)
.+||+|||||+ ||||++|+++|+++ |++|++++|..... ..+. ..++ ..|+
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl 122 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKR--GYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI 122 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence 46789999995 99999999999999 99999987521100 0010 0122 3456
Q ss_pred CCcc----ccC--CCCEEEEccCCCCCC-------C-------hHHHHHHHHHH--hCCCC-cEEEEcCCccccCCCCCc
Q 024494 135 KWTE----ATQ--KFPYVIFCAPPSRSL-------D-------YPGDVRLAALS--WNGEG-SFLFTSSSAIYDCSDNGA 191 (267)
Q Consensus 135 ~d~~----~~~--~~D~Vi~~a~~~~~~-------~-------~~~~~~~l~~~--~~~v~-r~V~~SS~~VYg~~~~~~ 191 (267)
.|.+ .++ ++|+|||+|+..... + ++.++.+++.+ ..+++ +||++||..|||... .+
T Consensus 123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~~ 201 (442)
T PLN02572 123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-ID 201 (442)
T ss_pred CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-CC
Confidence 6542 233 589999999653211 0 12233344332 23664 899999999999643 12
Q ss_pred cCC-----------CC---CCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc----------------
Q 024494 192 CDE-----------DS---PVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC---------------- 235 (267)
Q Consensus 192 ~~E-----------~~---p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~---------------- 235 (267)
++| ++ |..| .++|+.+|.++|.+++.+ + ++++|++++|||+.
T Consensus 202 ~~E~~i~~~~~~~e~~~~~~~~P--~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~ 279 (442)
T PLN02572 202 IEEGYITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD 279 (442)
T ss_pred CcccccccccccccccccCCCCC--CCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence 222 22 3344 468999999999988765 3 89999999999972
Q ss_pred ----hHH----HHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 236 ----YLV----EKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 236 ----~~l----~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
..+ ..+ +|+++.+ +.+.++.++||..+++
T Consensus 280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva 318 (442)
T PLN02572 280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTV 318 (442)
T ss_pred cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHH
Confidence 111 222 4777644 4456788999976654
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-19 Score=165.13 Aligned_cols=176 Identities=16% Similarity=0.148 Sum_probs=122.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh---c--cC---eeeecCCcc----ccC--CCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N--MG---ITPSLKWTE----ATQ--KFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~---~--~~---v~~d~~d~~----~~~--~~D~Vi~ 148 (267)
.|+|||||+ ||||++++++|+++ |++|++++|++....... . .. +..|+.|.+ .+. ++|+|||
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLEL--GAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHC--CCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 378999995 99999999999999 999999999765432211 0 11 334555542 222 5799999
Q ss_pred ccCCCCCC----C-------hHHHHHHHHHH--hCC-CCcEEEEcCCccccCCC-CCccCCCCCCCCCCCCHHHHHHHHH
Q 024494 149 CAPPSRSL----D-------YPGDVRLAALS--WNG-EGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKA 213 (267)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~l~~~--~~~-v~r~V~~SS~~VYg~~~-~~~~~E~~p~~p~~~~~y~~~k~~a 213 (267)
+|+..... + ++.+..+++.+ ..+ +++||++||..+||... ..+++|+.+..| .+.|+.+|.+.
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p--~~~Y~~sK~~~ 159 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGG--HDPYSSSKACA 159 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCC--CCcchhHHHHH
Confidence 99853221 1 12223333322 223 68999999999998643 235788887766 46899999999
Q ss_pred HHHHHHc-----------C--eeEEeeCccccCCc--------hHHHHH-hCCcceecCCCccccHHHHHHh
Q 024494 214 EKVILEF-----------G--GCVLRLAGLYISLC--------YLVEKF-QGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 214 E~~l~~~-----------~--~~IlR~~~iyGp~~--------~~l~~~-~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
|.+++.+ + ++++||+++|||+. .++..+ .|.++.++++.++.++||..++
T Consensus 160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~ 231 (349)
T TIGR02622 160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEP 231 (349)
T ss_pred HHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHH
Confidence 9887653 4 79999999999972 233444 4777777767788899997654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.1e-19 Score=171.80 Aligned_cols=174 Identities=14% Similarity=0.097 Sum_probs=118.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhh----hccCee---eecCCccccCCCCEEEEccCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DEL----INMGIT---PSLKWTEATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l----~~~~v~---~d~~d~~~~~~~D~Vi~~a~~~~~ 155 (267)
|||||||+ ||||++|+++|+++ |++|++++|..... +.+ ...+++ .|+.++ .+.++|+|||+|+....
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~--G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-~l~~~D~ViHlAa~~~~ 196 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMAR--GDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-ILLEVDQIYHLACPASP 196 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-hhcCCCEEEEeeeecch
Confidence 79999995 99999999999999 99999998753211 111 111222 233333 45689999999985432
Q ss_pred C----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCC-----CCCCCCCCHHHHHHHHHHHHH
Q 024494 156 L----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEKVI 217 (267)
Q Consensus 156 ~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~-----p~~p~~~~~y~~~k~~aE~~l 217 (267)
. + ++.+..+++.+ ..+ .+|||+||..|||.....+.+|+. |..+ .+.|+++|.++|+++
T Consensus 197 ~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~--~s~Y~~SK~~aE~~~ 273 (442)
T PLN02206 197 VHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGV--RSCYDEGKRTAETLT 273 (442)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHhC-CEEEEECChHHhCCCCCCCCCccccccCCCCCc--cchHHHHHHHHHHHH
Confidence 1 1 23344555432 235 489999999999876555667764 3333 368999999999988
Q ss_pred HHc----C--eeEEeeCccccCCc---------hHHHHH-hCCcceecC-CCccccHHHHHHhh
Q 024494 218 LEF----G--GCVLRLAGLYISLC---------YLVEKF-QGLPLLLKS-PGIFSANWHYICVK 264 (267)
Q Consensus 218 ~~~----~--~~IlR~~~iyGp~~---------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~~ 264 (267)
+.+ + ++++|++++|||+. .++..+ +++++.+.+ +.++.+++|..+++
T Consensus 274 ~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva 337 (442)
T PLN02206 274 MDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLV 337 (442)
T ss_pred HHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHH
Confidence 754 3 89999999999971 233333 467766544 44677888876654
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=160.18 Aligned_cols=174 Identities=22% Similarity=0.222 Sum_probs=120.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCc----cccCCC-CEEEEccCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWT----EATQKF-PYVIFCAPPSRS 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~----~~~~~~-D~Vi~~a~~~~~ 155 (267)
|+|||||+ ||||++|+++|+++ ||+|++++|......... .+ +..++.|. +...+. |+|||+|+....
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~ 77 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAA--GHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSV 77 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhC--CCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCch
Confidence 34999995 99999999999999 999999999876654332 12 22333442 234455 999999986532
Q ss_pred C------------ChHHHHHHHHHHh--CCCCcEEEEcCCccccCC-CCCccCCC-CCCCCCCCCHHHHHHHHHHHHHHH
Q 024494 156 L------------DYPGDVRLAALSW--NGEGSFLFTSSSAIYDCS-DNGACDED-SPVVPIGRSPRTDVLLKAEKVILE 219 (267)
Q Consensus 156 ~------------~~~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~-~~~~~~E~-~p~~p~~~~~y~~~k~~aE~~l~~ 219 (267)
. .++.++++++.++ .++++|||.||.++|+.. .+.+++|+ .|..|. ++|+.+|+++|+.++.
T Consensus 78 ~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~--~~Yg~sK~~~E~~~~~ 155 (314)
T COG0451 78 PDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL--NPYGVSKLAAEQLLRA 155 (314)
T ss_pred hhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC--CHHHHHHHHHHHHHHH
Confidence 1 1334455555322 489999999998888764 33478998 676674 4899999999999887
Q ss_pred cC------eeEEeeCccccCCc------hHHH----HH-hCCc-ceec-CCCccccHHHHHHh
Q 024494 220 FG------GCVLRLAGLYISLC------YLVE----KF-QGLP-LLLK-SPGIFSANWHYICV 263 (267)
Q Consensus 220 ~~------~~IlR~~~iyGp~~------~~l~----~~-~g~~-v~~~-~~~~~~n~IH~~~~ 263 (267)
+. ++++||+++|||++ ++.. ++ ++.+ .... ++.+..+++|..++
T Consensus 156 ~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 218 (314)
T COG0451 156 YARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDV 218 (314)
T ss_pred HHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHH
Confidence 53 89999999999993 2232 23 3665 3332 33455567775443
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-19 Score=164.41 Aligned_cols=177 Identities=13% Similarity=0.060 Sum_probs=118.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEE-EeCCCCC--chhhhc----cCe---eeecCCcc----ccC--CCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADH--HDELIN----MGI---TPSLKWTE----ATQ--KFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~-l~R~~~~--~~~l~~----~~v---~~d~~d~~----~~~--~~D~V 146 (267)
|++|||||+ ||||++|+++|+++ |++|++ ++|.... ...+.. ..+ ..|+.|.+ .++ ++|+|
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~V 78 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINE--TSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCV 78 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHc--CCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEE
Confidence 579999996 99999999999999 987654 4443221 111111 122 34555542 233 48999
Q ss_pred EEccCCCCCC----C-------hHHHHHHHHHHh-----------CCCCcEEEEcCCccccCCC--CCccCCCCCCCCCC
Q 024494 147 IFCAPPSRSL----D-------YPGDVRLAALSW-----------NGEGSFLFTSSSAIYDCSD--NGACDEDSPVVPIG 202 (267)
Q Consensus 147 i~~a~~~~~~----~-------~~~~~~~l~~~~-----------~~v~r~V~~SS~~VYg~~~--~~~~~E~~p~~p~~ 202 (267)
||+|+..... + +..++.+++... .++++||++||..+||... ..+++|+.|..|.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~- 157 (355)
T PRK10217 79 MHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPS- 157 (355)
T ss_pred EECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCC-
Confidence 9999864321 1 222333443221 2467999999999998632 3468898887774
Q ss_pred CCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 203 RSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
+.|+.+|.++|.++..+ + ++++||+++|||+. . ++.++ ++.++.+ +++.++.++||..+++
T Consensus 158 -s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a 233 (355)
T PRK10217 158 -SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHA 233 (355)
T ss_pred -ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHH
Confidence 68999999999888654 3 89999999999993 2 23333 4666544 4556788999976653
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.9e-19 Score=177.70 Aligned_cols=180 Identities=16% Similarity=0.167 Sum_probs=123.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe---eeecCCc-----cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI---TPSLKWT-----EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v---~~d~~d~-----~~~~~~D~Vi~~a~~ 152 (267)
.+|+|||||+ ||||++|+++|+++. ||+|++++|.+.....+.. .++ ..|+.|. +++.++|+|||+|+.
T Consensus 314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~-g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~ 392 (660)
T PRK08125 314 RRTRVLILGVNGFIGNHLTERLLRDD-NYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAI 392 (660)
T ss_pred cCCEEEEECCCchHHHHHHHHHHhCC-CcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccc
Confidence 4589999995 999999999999841 6999999997654322211 123 3355543 245789999999985
Q ss_pred CCCCC-----------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCC---CCC--CCCHHHHHHHHHH
Q 024494 153 SRSLD-----------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VPI--GRSPRTDVLLKAE 214 (267)
Q Consensus 153 ~~~~~-----------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~---~p~--~~~~y~~~k~~aE 214 (267)
..... +..+..+++.+ ..+ ++|||+||..|||...+.+++|+.+. .|. +.+.|+.+|..+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E 471 (660)
T PRK08125 393 ATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLD 471 (660)
T ss_pred cCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHH
Confidence 43211 12334444432 234 89999999999997655678888753 221 1357999999999
Q ss_pred HHHHHc----C--eeEEeeCccccCCc---------------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 215 KVILEF----G--GCVLRLAGLYISLC---------------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 215 ~~l~~~----~--~~IlR~~~iyGp~~---------------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
++++.+ + ++++||+++|||+. .++..+ ++.++.+. ++.+..++||..+++
T Consensus 472 ~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva 544 (660)
T PRK08125 472 RVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGI 544 (660)
T ss_pred HHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHH
Confidence 998764 3 89999999999972 123333 36666543 455788899976554
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.3e-19 Score=157.91 Aligned_cols=161 Identities=14% Similarity=0.133 Sum_probs=121.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc------ccCCCCEEEEccCCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE------ATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~------~~~~~D~Vi~~a~~~~~~~ 157 (267)
|+|||+|+ |.+|+.|++.|. . +++|++++|.. .|+.|++ .-.++|+|||||+....+.
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~--~~~v~a~~~~~------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~ 65 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-G--EFEVIATDRAE------------LDITDPDAVLEVIRETRPDVVINAAAYTAVDK 65 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-C--CceEEeccCcc------------ccccChHHHHHHHHhhCCCEEEECcccccccc
Confidence 44999997 999999999998 5 89999999865 3444432 2247999999999876542
Q ss_pred -----------hHHHHHHHHHHhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ee
Q 024494 158 -----------YPGDVRLAALSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (267)
Q Consensus 158 -----------~~~~~~~l~~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~ 223 (267)
+..+..+++.+... ..++||+||-.||+...+.+..|+++++|. +.||++|+..|+.+++++ .+
T Consensus 66 aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~--nvYG~sKl~GE~~v~~~~~~~~ 143 (281)
T COG1091 66 AESEPELAFAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPL--NVYGRSKLAGEEAVRAAGPRHL 143 (281)
T ss_pred ccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCCh--hhhhHHHHHHHHHHHHhCCCEE
Confidence 23344555433332 468999999999988777889999999996 689999999999999986 99
Q ss_pred EEeeCccccCC-chH----HHHHh-CCcceecCCCccccHHHHHHh
Q 024494 224 VLRLAGLYISL-CYL----VEKFQ-GLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 224 IlR~~~iyGp~-~~~----l~~~~-g~~v~~~~~~~~~n~IH~~~~ 263 (267)
|+|.+++||.. +.| ++..+ |+++.+. .+|+.++++..++
T Consensus 144 I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv-~Dq~gsPt~~~dl 188 (281)
T COG1091 144 ILRTSWVYGEYGNNFVKTMLRLAKEGKELKVV-DDQYGSPTYTEDL 188 (281)
T ss_pred EEEeeeeecCCCCCHHHHHHHHhhcCCceEEE-CCeeeCCccHHHH
Confidence 99999999996 333 34444 7777664 4466666665443
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.2e-18 Score=157.92 Aligned_cols=172 Identities=13% Similarity=0.082 Sum_probs=112.3
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc--------cc-----cCCCCEEEEccCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--------EA-----TQKFPYVIFCAPP 152 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~--------~~-----~~~~D~Vi~~a~~ 152 (267)
|||||+ ||||++|+++|+++ |++|+++.|+......... -...++.|. .. ..++|+|||||+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~ 78 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVN-LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGAC 78 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhC--CCceEEEecCCCcchHHHh-hhhhhhhhhhhHHHHHHHHhcccccCCccEEEECcee
Confidence 799985 99999999999999 9987777665432211100 011222221 11 1379999999974
Q ss_pred CCCC--C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-
Q 024494 153 SRSL--D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (267)
Q Consensus 153 ~~~~--~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~- 220 (267)
.... + +...+.+++.. ..++ +|||+||.+|||.....+.+|+.+..|. +.|+.+|..+|+.++++
T Consensus 79 ~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~ 155 (308)
T PRK11150 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL--NVYGYSKFLFDEYVRQIL 155 (308)
T ss_pred cCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC--CHHHHHHHHHHHHHHHHH
Confidence 3211 1 22233444332 2354 7999999999997655578888777774 68999999999988765
Q ss_pred ---C--eeEEeeCccccCCc-----------hHHHHH-hCCccee-c-CCCccccHHHHHHhh
Q 024494 221 ---G--GCVLRLAGLYISLC-----------YLVEKF-QGLPLLL-K-SPGIFSANWHYICVK 264 (267)
Q Consensus 221 ---~--~~IlR~~~iyGp~~-----------~~l~~~-~g~~v~~-~-~~~~~~n~IH~~~~~ 264 (267)
+ ++++|++++|||+. .+.+++ +|.+..+ . ++....++||..+++
T Consensus 156 ~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a 218 (308)
T PRK11150 156 PEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVA 218 (308)
T ss_pred HHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHH
Confidence 3 79999999999972 122444 3554322 2 233567888876654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=159.53 Aligned_cols=176 Identities=19% Similarity=0.087 Sum_probs=120.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhh-------ccCe---eeecCCcc----ccC--C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGI---TPSLKWTE----ATQ--K 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~-------~~~v---~~d~~d~~----~~~--~ 142 (267)
++|||||+ ||||++|+++|+++ |++|++++|+++. ...+. ..++ ..|+.|.+ .+. +
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 78 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEK--GYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK 78 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHC--CCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence 57999996 99999999999999 9999999997642 11111 0122 34666642 233 5
Q ss_pred CCEEEEccCCCCCC----C-------hHHHHHHHHHHh--CCC---CcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 143 FPYVIFCAPPSRSL----D-------YPGDVRLAALSW--NGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~----~-------~~~~~~~l~~~~--~~v---~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
+|+|||+|+..... . +..+..+++.+. .++ ++|||+||..|||.....+++|+.|..|. +.|
T Consensus 79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y 156 (343)
T TIGR01472 79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPR--SPY 156 (343)
T ss_pred CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCC--Chh
Confidence 79999999864321 1 112334443322 244 38999999999997655678899888774 689
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCccccCCc--h--------HHHHH-hCCc--ceecCCCccccHHHHHHhh
Q 024494 207 TDVLLKAEKVILEF----G--GCVLRLAGLYISLC--Y--------LVEKF-QGLP--LLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 207 ~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~--~--------~l~~~-~g~~--v~~~~~~~~~n~IH~~~~~ 264 (267)
+.+|.++|.+++.+ + ++++|+.++|||++ . ++..+ .|++ ++.+++.+..++||..+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a 233 (343)
T TIGR01472 157 AAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYV 233 (343)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHH
Confidence 99999999998664 3 67889999999962 1 12333 3543 3335556888999976553
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-18 Score=173.04 Aligned_cols=179 Identities=17% Similarity=0.212 Sum_probs=122.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC--CCchhhh----ccCee---eecCCcc------ccCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELI----NMGIT---PSLKWTE------ATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~--~~~~~l~----~~~v~---~d~~d~~------~~~~~D~Vi 147 (267)
+|+|||||+ ||||++|+++|+++.++++|++++|.. .....+. ..+++ .|+.|.+ ...++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 489999995 999999999999874468999999853 1111111 11233 3555542 125899999
Q ss_pred EccCCCCCCC-----------hHHHHHHHHHH--hCC-CCcEEEEcCCccccCCCCCc---cCCCCCCCCCCCCHHHHHH
Q 024494 148 FCAPPSRSLD-----------YPGDVRLAALS--WNG-EGSFLFTSSSAIYDCSDNGA---CDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~l~~~--~~~-v~r~V~~SS~~VYg~~~~~~---~~E~~p~~p~~~~~y~~~k 210 (267)
|+|+....+. ++.++.+++.+ ..+ +++|||+||..|||.....+ .+|+.+..|. +.|+.+|
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~--~~Y~~sK 163 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPT--NPYSATK 163 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCC--CCcHHHH
Confidence 9999754321 12334445432 234 78999999999999764332 3677777663 6899999
Q ss_pred HHHHHHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 211 LKAEKVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 211 ~~aE~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
.++|++++.+ + ++|+||+++|||++ . ++..+ +|.++.+. ++.+..++||..+++
T Consensus 164 ~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva 232 (668)
T PLN02260 164 AGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVA 232 (668)
T ss_pred HHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHH
Confidence 9999998764 3 89999999999983 2 23333 36666554 345678899976654
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-18 Score=158.25 Aligned_cols=148 Identities=16% Similarity=0.124 Sum_probs=102.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh------hhcc-Ce---eeecCCc----cccCCCCEEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE------LINM-GI---TPSLKWT----EATQKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~------l~~~-~v---~~d~~d~----~~~~~~D~Vi 147 (267)
++++|||||+ ||||++|+++|+++ |++|++++|+...... +... .+ ..|+.|. +.+.++|+||
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQK--GYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHC--CCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 3588999995 99999999999999 9999999987654321 1111 12 3455554 2456899999
Q ss_pred EccCCCCC--CC--------hHHHHHHHHHH--hC-CCCcEEEEcCCccccCCC----CCccCCCC---------CCCCC
Q 024494 148 FCAPPSRS--LD--------YPGDVRLAALS--WN-GEGSFLFTSSSAIYDCSD----NGACDEDS---------PVVPI 201 (267)
Q Consensus 148 ~~a~~~~~--~~--------~~~~~~~l~~~--~~-~v~r~V~~SS~~VYg~~~----~~~~~E~~---------p~~p~ 201 (267)
|+|++... .+ ++.+..+++.+ .. ++++||++||..+||... +.+++|+. +..|
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p- 164 (338)
T PLN00198 86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPP- 164 (338)
T ss_pred EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCc-
Confidence 99986421 11 12334444432 22 578999999999998532 23455542 2223
Q ss_pred CCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
.++|+.+|.++|++++.+ + ++++||+++|||+
T Consensus 165 -~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 165 -TWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS 202 (338)
T ss_pred -cchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence 357999999999987764 3 8999999999997
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-18 Score=157.31 Aligned_cols=175 Identities=15% Similarity=0.058 Sum_probs=116.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh---hhc-----cC---eeeecCCc----cccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN-----MG---ITPSLKWT----EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~---l~~-----~~---v~~d~~d~----~~~~~~D~Vi~ 148 (267)
++|||||+ ||||++|+++|+++ |++|++++|+...... +.. .. +..|+.|+ ..++++|+|||
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQR--GYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHC--CCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 78999995 99999999999999 9999999997654221 110 01 23355554 24678999999
Q ss_pred ccCCCCC--C----C----hHHHHHHHHHH--hC-CCCcEEEEcCCc--cccCC---CCCccCCCCCCCCCC----CCHH
Q 024494 149 CAPPSRS--L----D----YPGDVRLAALS--WN-GEGSFLFTSSSA--IYDCS---DNGACDEDSPVVPIG----RSPR 206 (267)
Q Consensus 149 ~a~~~~~--~----~----~~~~~~~l~~~--~~-~v~r~V~~SS~~--VYg~~---~~~~~~E~~p~~p~~----~~~y 206 (267)
+|++... . . ++.+..+++.+ .. ++++|||+||.+ +|+.. .+.+++|+.+..|.. .+.|
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 9986421 1 1 23344455432 23 688999999987 47542 224578887665521 2479
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCccccCCch--------HH-HHHhCCcceecCCCccccHHHHHHhh
Q 024494 207 TDVLLKAEKVILEF----G--GCVLRLAGLYISLCY--------LV-EKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 207 ~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~~--------~l-~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+.+|..+|++++.+ + ++++||+++|||+.. ++ +.+.|.+.. +.+..++||.-+++
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva 232 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTF---PNASYRWVDVRDVA 232 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccC---CCCCcCeEEHHHHH
Confidence 99999999987653 3 899999999999721 12 222344422 23567888866553
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=153.63 Aligned_cols=172 Identities=19% Similarity=0.144 Sum_probs=121.5
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccC-CCCEEEEccCCCCCCC-h----H
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQ-KFPYVIFCAPPSRSLD-Y----P 159 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~-~~D~Vi~~a~~~~~~~-~----~ 159 (267)
|+|+|. |+||++|+.+|.+. ||+|++++|++.+........+...-...+... ++|+|||+||..-... | .
T Consensus 1 IliTGgTGlIG~~L~~~L~~~--gh~v~iltR~~~~~~~~~~~~v~~~~~~~~~~~~~~DavINLAG~~I~~rrWt~~~K 78 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKG--GHQVTILTRRPPKASQNLHPNVTLWEGLADALTLGIDAVINLAGEPIAERRWTEKQK 78 (297)
T ss_pred CeEeccccchhHHHHHHHHhC--CCeEEEEEcCCcchhhhcCccccccchhhhcccCCCCEEEECCCCccccccCCHHHH
Confidence 689985 99999999999999 999999999988775543333331111122333 7999999999764432 2 1
Q ss_pred --------HHHHHHHH--H--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc---C--e
Q 024494 160 --------GDVRLAAL--S--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---G--G 222 (267)
Q Consensus 160 --------~~~~~l~~--~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~---~--~ 222 (267)
+.++.+.. + ..+++.+|-.|.++.||...+..+||++|... ..-++...++|+..+.. + +
T Consensus 79 ~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~---~Fla~lc~~WE~~a~~a~~~gtRv 155 (297)
T COG1090 79 EEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGD---DFLAQLCQDWEEEALQAQQLGTRV 155 (297)
T ss_pred HHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCC---ChHHHHHHHHHHHHhhhhhcCceE
Confidence 12222221 1 23577899999999999998889999976543 34567888899887664 3 8
Q ss_pred eEEeeCccccCCc----hHHHHHh-CCcceecCCCccccHHHHHHh
Q 024494 223 CVLRLAGLYISLC----YLVEKFQ-GLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 223 ~IlR~~~iyGp~~----~~l~~~~-g~~v~~~~~~~~~n~IH~~~~ 263 (267)
+++|.+.+.|+.. .++..++ |..-.++++.||++|||.-|+
T Consensus 156 vllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~ 201 (297)
T COG1090 156 VLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDL 201 (297)
T ss_pred EEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHH
Confidence 9999999999862 3333343 444445778899999996543
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=5.6e-18 Score=153.65 Aligned_cols=148 Identities=18% Similarity=0.164 Sum_probs=109.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCc----cccCCCCEEEEccCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWT----EATQKFPYVIFCAPPSRS- 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~----~~~~~~D~Vi~~a~~~~~- 155 (267)
|+|||+|+ |+||++|+++|+++ |++|++++|+++....+...++ ..|+.|. +.++++|+|||+++....
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~ 78 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQ--GEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLW 78 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHC--CCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccC
Confidence 57999995 99999999999999 9999999998765443332233 3455554 356789999999975321
Q ss_pred -CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccC-CCCCccCCCCCCCCCC-CCHHHHHHHHHHHHHHHc---
Q 024494 156 -LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDC-SDNGACDEDSPVVPIG-RSPRTDVLLKAEKVILEF--- 220 (267)
Q Consensus 156 -~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~-~~~~~~~E~~p~~p~~-~~~y~~~k~~aE~~l~~~--- 220 (267)
.+ ++.+..+++. ...+++++|++||..+||. ..+.+.+|+.+..|.. .+.|+.+|..+|+.++++
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 158 (328)
T TIGR03466 79 APDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAE 158 (328)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHh
Confidence 11 1223334432 2346889999999999986 3345788888776532 357999999999998764
Q ss_pred -C--eeEEeeCccccCC
Q 024494 221 -G--GCVLRLAGLYISL 234 (267)
Q Consensus 221 -~--~~IlR~~~iyGp~ 234 (267)
+ ++++||+.+||++
T Consensus 159 ~~~~~~ilR~~~~~G~~ 175 (328)
T TIGR03466 159 KGLPVVIVNPSTPIGPR 175 (328)
T ss_pred cCCCEEEEeCCccCCCC
Confidence 3 8999999999998
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=154.25 Aligned_cols=174 Identities=15% Similarity=0.124 Sum_probs=126.6
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCC-----CCchhhhc----cCeeeecCCcc----ccC--CCCEEEE
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTA-----DHHDELIN----MGITPSLKWTE----ATQ--KFPYVIF 148 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~-----~~~~~l~~----~~v~~d~~d~~----~~~--~~D~Vi~ 148 (267)
|++|||| +||||+.+++.+++++|.++|+.++.-. +....+.. ..+..|+.|.+ .+. ++|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 6899997 7999999999999998888899998732 22222221 12445666652 233 6999999
Q ss_pred ccCCCCCCC-----------hHHHHHHHHHHhC--CC-CcEEEEcCCccccCCCC--CccCCCCCCCCCCCCHHHHHHHH
Q 024494 149 CAPPSRSLD-----------YPGDVRLAALSWN--GE-GSFLFTSSSAIYDCSDN--GACDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 149 ~a~~~~~~~-----------~~~~~~~l~~~~~--~v-~r~V~~SS~~VYg~~~~--~~~~E~~p~~p~~~~~y~~~k~~ 212 (267)
.|+.+..+. ++-++.+++++.. .. -||+++||-.|||+-.. ..++|++|.+|. ++|..+|++
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~Ps--SPYSASKAa 158 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPS--SPYSASKAA 158 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCC--CCcchhhhh
Confidence 999776431 3445556654332 22 49999999999998543 368999999995 799999999
Q ss_pred HHHHHHHc----C--eeEEeeCccccCCc---hHH-----HHHhCCcceecC-CCccccHHHH
Q 024494 213 AEKVILEF----G--GCVLRLAGLYISLC---YLV-----EKFQGLPLLLKS-PGIFSANWHY 260 (267)
Q Consensus 213 aE~~l~~~----~--~~IlR~~~iyGp~~---~~l-----~~~~g~~v~~~~-~~~~~n~IH~ 260 (267)
+..+++++ + ++|.|.++-|||.. .++ +.+.|+++.+-+ +.+...|+|.
T Consensus 159 sD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~V 221 (340)
T COG1088 159 SDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYV 221 (340)
T ss_pred HHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEe
Confidence 99988876 3 89999999999983 222 334588886644 4488899883
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.8e-18 Score=153.18 Aligned_cols=163 Identities=18% Similarity=0.179 Sum_probs=114.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCc----cccCCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWT----EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~----~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+|||+|+ ||||++|+++|+++ ||+|++++|++++...+...++++ |+.|+ +++.++|+|||+++....+
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~--g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~ 78 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDE--GYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSD 78 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCC
Confidence 58999996 99999999999999 999999999876544333345543 55554 3678999999998743221
Q ss_pred --C----hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEe
Q 024494 157 --D----YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (267)
Q Consensus 157 --~----~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR 226 (267)
. ...+..+++. ...+++|||++||.+++. .+ ..+|.+.|.++|+++++++ ++|+|
T Consensus 79 ~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~----------~~-----~~~~~~~K~~~e~~l~~~~l~~tilR 143 (317)
T CHL00194 79 LYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQ----------YP-----YIPLMKLKSDIEQKLKKSGIPYTIFR 143 (317)
T ss_pred ccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccc----------cC-----CChHHHHHHHHHHHHHHcCCCeEEEe
Confidence 1 2334455543 235899999999965421 11 1247789999999999887 99999
Q ss_pred eCccccCC-c-hHHHHHhCCcceecCCCccccHHHHHHhh
Q 024494 227 LAGLYISL-C-YLVEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 227 ~~~iyGp~-~-~~l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
|+++|+.- . .....+.+.++++.++.+..++||.-+++
T Consensus 144 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 183 (317)
T CHL00194 144 LAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAA 183 (317)
T ss_pred ecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHH
Confidence 99999753 2 22223346677776666677888865543
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=150.86 Aligned_cols=172 Identities=16% Similarity=0.120 Sum_probs=111.3
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCc--hhhhccCeeeecCCcc---c-----cCCCCEEEEccCCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHH--DELINMGITPSLKWTE---A-----TQKFPYVIFCAPPSR 154 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~--~~l~~~~v~~d~~d~~---~-----~~~~D~Vi~~a~~~~ 154 (267)
|||||+ |+||++|+++|+++ |+ +|++++|..... ..+....+..++.+.+ . +.++|+|||+|+...
T Consensus 1 ilItGatG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~ 78 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNER--GITDILVVDNLRDGHKFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSD 78 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHc--CCceEEEEecCCCchhhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccC
Confidence 689985 99999999999999 97 798888754322 1111111222343331 1 257999999998643
Q ss_pred CC--C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCC-CCCCCCHHHHHHHHHHHHHHHc--
Q 024494 155 SL--D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKAEKVILEF-- 220 (267)
Q Consensus 155 ~~--~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~-~p~~~~~y~~~k~~aE~~l~~~-- 220 (267)
.. + +..+..+++.+ ..++ +||++||++||+.... +.+|+++. .| .+.|+.+|..+|+.++++
T Consensus 79 ~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~-~~~e~~~~~~p--~~~Y~~sK~~~e~~~~~~~~ 154 (314)
T TIGR02197 79 TTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEA-GFREGRELERP--LNVYGYSKFLFDQYVRRRVL 154 (314)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCC-CcccccCcCCC--CCHHHHHHHHHHHHHHHHhH
Confidence 21 1 12333444322 2344 8999999999987643 45555543 35 468999999999988752
Q ss_pred ----C--eeEEeeCccccCCc-------h----HHHHH-hCCccee-------cCCCccccHHHHHHhh
Q 024494 221 ----G--GCVLRLAGLYISLC-------Y----LVEKF-QGLPLLL-------KSPGIFSANWHYICVK 264 (267)
Q Consensus 221 ----~--~~IlR~~~iyGp~~-------~----~l~~~-~g~~v~~-------~~~~~~~n~IH~~~~~ 264 (267)
+ ++++|++.+|||++ . ++..+ ++.++.+ +++.++.++||..+++
T Consensus 155 ~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a 223 (314)
T TIGR02197 155 PEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVV 223 (314)
T ss_pred hhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHH
Confidence 2 79999999999982 1 23333 3554433 2334667899977654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.4e-18 Score=156.91 Aligned_cols=148 Identities=16% Similarity=0.121 Sum_probs=101.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCe---eeecCCc----cccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI---TPSLKWT----EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v---~~d~~d~----~~~~~~D~Vi~~a~ 151 (267)
|+|||||+ ||||++|+++|+++ |++|++++|++.+...+.. .++ ..|+.|. +.+.++|+|||+|+
T Consensus 11 ~~vLVtG~~GfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~ 88 (353)
T PLN02896 11 GTYCVTGATGYIGSWLVKLLLQR--GYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA 88 (353)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence 78999995 99999999999999 9999999997654332211 112 3355554 24567999999998
Q ss_pred CCCCC------C---h---------HHHHHHHHHH--hC-CCCcEEEEcCCccccCCCC-----CccCCCCC--CC----
Q 024494 152 PSRSL------D---Y---------PGDVRLAALS--WN-GEGSFLFTSSSAIYDCSDN-----GACDEDSP--VV---- 199 (267)
Q Consensus 152 ~~~~~------~---~---------~~~~~~l~~~--~~-~v~r~V~~SS~~VYg~~~~-----~~~~E~~p--~~---- 199 (267)
..... + + ..+..+++.+ .. ++++||++||..+||.... .+++|+.+ ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~ 168 (353)
T PLN02896 89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWN 168 (353)
T ss_pred cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhc
Confidence 64211 1 1 1223344332 23 3789999999999985321 34677632 11
Q ss_pred -CCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 200 -PIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 -p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
+.+.++|+.+|+++|+++..+ + ++++|++++|||+
T Consensus 169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~ 210 (353)
T PLN02896 169 TKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF 210 (353)
T ss_pred cCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Confidence 011247999999999988765 3 8999999999997
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=152.84 Aligned_cols=149 Identities=15% Similarity=0.033 Sum_probs=104.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh---hc-----cCe---eeecCCc----cccCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---IN-----MGI---TPSLKWT----EATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l---~~-----~~v---~~d~~d~----~~~~~~D~Vi 147 (267)
.|+|||||+ |+||++|+++|+++ |++|++++|++...... .. ..+ ..|+.|. +.++++|+||
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFR--GYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 378999995 99999999999999 99999999886543221 10 012 3355554 2456899999
Q ss_pred EccCCCCC----CC-------hHHHHHHHHHHh---CCCCcEEEEcCCccccCC-----CCCccCCCCCCCCCC----CC
Q 024494 148 FCAPPSRS----LD-------YPGDVRLAALSW---NGEGSFLFTSSSAIYDCS-----DNGACDEDSPVVPIG----RS 204 (267)
Q Consensus 148 ~~a~~~~~----~~-------~~~~~~~l~~~~---~~v~r~V~~SS~~VYg~~-----~~~~~~E~~p~~p~~----~~ 204 (267)
|+|+.... .+ +..+..+++.+. .++++||++||..+|+.. ...+++|+++..|.. .+
T Consensus 83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~ 162 (325)
T PLN02989 83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ 162 (325)
T ss_pred EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence 99986421 11 122233333221 246799999999887543 234689998876631 25
Q ss_pred HHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
.|+.+|+++|+++..+ + ++++||+++|||+
T Consensus 163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~ 198 (325)
T PLN02989 163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI 198 (325)
T ss_pred chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence 7999999999988753 3 8999999999998
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.5e-17 Score=148.51 Aligned_cols=174 Identities=18% Similarity=0.127 Sum_probs=113.1
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--cCCccccCCCCEEEEccCCCCC-C--C---
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--LKWTEATQKFPYVIFCAPPSRS-L--D--- 157 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--~~d~~~~~~~D~Vi~~a~~~~~-~--~--- 157 (267)
|||||+ ||||++|+++|+++ |++|++++|++.....+....+... ..+.+.+.++|+|||||+.... . .
T Consensus 1 vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~~~~~~ 78 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKD--GHEVTILTRSPPAGANTKWEGYKPWAPLAESEALEGADAVINLAGEPIADKRWTEER 78 (292)
T ss_pred CEEEcccchhhHHHHHHHHHc--CCEEEEEeCCCCCCCcccceeeecccccchhhhcCCCCEEEECCCCCcccccCCHHH
Confidence 689995 99999999999999 9999999998776543221111111 1122456789999999986432 1 0
Q ss_pred -------hHHHHHHHHHH--hCCC--CcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH---cC--
Q 024494 158 -------YPGDVRLAALS--WNGE--GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE---FG-- 221 (267)
Q Consensus 158 -------~~~~~~~l~~~--~~~v--~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~---~~-- 221 (267)
+...+++++.+ ..++ .+||+.|+.++||.....+++|+.+..+. +.+++.+.++|+.+.. .+
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~ 156 (292)
T TIGR01777 79 KQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGD--DFLAELCRDWEEAAQAAEDLGTR 156 (292)
T ss_pred HHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCC--ChHHHHHHHHHHHhhhchhcCCc
Confidence 22334455432 2354 35777788889997666678888865453 3566677777776543 23
Q ss_pred eeEEeeCccccCCchHH----HHHh-CCcceecCCCccccHHHHHHhh
Q 024494 222 GCVLRLAGLYISLCYLV----EKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 222 ~~IlR~~~iyGp~~~~l----~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
++|+||+.+|||+.... ..+. .....++.+.++.++||..+++
T Consensus 157 ~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva 204 (292)
T TIGR01777 157 VVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLV 204 (292)
T ss_pred eEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHH
Confidence 99999999999974222 2222 2111234455788999976553
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=152.22 Aligned_cols=175 Identities=18% Similarity=0.111 Sum_probs=115.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh---hhc-----cCe---eeecCCc----cccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN-----MGI---TPSLKWT----EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~---l~~-----~~v---~~d~~d~----~~~~~~D~Vi~ 148 (267)
++|||||+ ||||++++++|+++ |++|+++.|+...... +.. ..+ ..|+.|+ +.+.++|+|||
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLR--GYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 78999995 99999999999999 9999999998654322 111 122 3355554 24568999999
Q ss_pred ccCCCCC--CC--------hHHHHHHHHHH--h-CCCCcEEEEcCCccc--cCC---CCCccCCCCCCCCC----CCCHH
Q 024494 149 CAPPSRS--LD--------YPGDVRLAALS--W-NGEGSFLFTSSSAIY--DCS---DNGACDEDSPVVPI----GRSPR 206 (267)
Q Consensus 149 ~a~~~~~--~~--------~~~~~~~l~~~--~-~~v~r~V~~SS~~VY--g~~---~~~~~~E~~p~~p~----~~~~y 206 (267)
+|++... .+ ++.+..+++.+ . .+++|||++||.++| +.. .+.+++|+.+..|. +.+.|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 9986421 11 12334444432 2 357899999999864 432 23457787654431 23579
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCccccCCch--------HHHHH-hCCcceecCCCccccHHHHHHhh
Q 024494 207 TDVLLKAEKVILEF----G--GCVLRLAGLYISLCY--------LVEKF-QGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 207 ~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~~--------~l~~~-~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+.+|..+|++++++ + ++++||+.+|||+.. ++..+ .|.+.+ +.+..++||.-+++
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~v~v~Dva 233 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF---NNRFYRFVDVRDVA 233 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCC---CCcCcceeEHHHHH
Confidence 99999999887764 3 899999999999721 12222 355432 23456778866554
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.1e-17 Score=154.25 Aligned_cols=176 Identities=13% Similarity=0.068 Sum_probs=116.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEEeCCCC--Cchhhhc----cC---eeeecCCcc----cc--CCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTAD--HHDELIN----MG---ITPSLKWTE----AT--QKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l~R~~~--~~~~l~~----~~---v~~d~~d~~----~~--~~~D~Vi 147 (267)
|||||||+ |+||++|+++|+++ |++ |+++++... ....+.. .. +..|+.|.+ .+ .++|+||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~--g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINN--TQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVM 78 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHh--CCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEE
Confidence 58999995 99999999999999 875 666665321 1111111 11 344666642 23 2589999
Q ss_pred EccCCCCCC-------C----hHHHHHHHHHHh-----------CCCCcEEEEcCCccccCCC----------CCccCCC
Q 024494 148 FCAPPSRSL-------D----YPGDVRLAALSW-----------NGEGSFLFTSSSAIYDCSD----------NGACDED 195 (267)
Q Consensus 148 ~~a~~~~~~-------~----~~~~~~~l~~~~-----------~~v~r~V~~SS~~VYg~~~----------~~~~~E~ 195 (267)
|+|+..... + ++.+..+++.+. .++++||++||..+||... ..+++|+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~ 158 (352)
T PRK10084 79 HLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTET 158 (352)
T ss_pred ECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcccc
Confidence 999864321 1 334444544322 1356899999999998631 1247888
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCccee-cCCCccccHHHH
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLL-KSPGIFSANWHY 260 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~-~~~~~~~n~IH~ 260 (267)
++..|. +.|+.+|.++|++++.+ + ++++|++.+|||+. . ++..+ ++.++.+ +++.+..++||.
T Consensus 159 ~~~~p~--~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 159 TAYAPS--SPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred CCCCCC--ChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 887774 68999999999988654 3 79999999999983 1 22333 3666544 445678888886
Q ss_pred HHhh
Q 024494 261 ICVK 264 (267)
Q Consensus 261 ~~~~ 264 (267)
-+++
T Consensus 237 ~D~a 240 (352)
T PRK10084 237 EDHA 240 (352)
T ss_pred HHHH
Confidence 6543
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.5e-18 Score=151.40 Aligned_cols=163 Identities=18% Similarity=0.137 Sum_probs=110.1
Q ss_pred EEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----c--cCCCCEEEEccCCCCC-----
Q 024494 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----A--TQKFPYVIFCAPPSRS----- 155 (267)
Q Consensus 88 LV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~--~~~~D~Vi~~a~~~~~----- 155 (267)
||||+ ||||++|++.|+++ |++|+++.+.. ..|+.|.+ . ..++|+|||||+....
T Consensus 1 lItGa~GfiG~~l~~~L~~~--g~~v~~~~~~~-----------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~~ 67 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEAL--GFTNLVLRTHK-----------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHANM 67 (306)
T ss_pred CcccCCCcccHHHHHHHHhC--CCcEEEeeccc-----------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchhh
Confidence 68885 99999999999999 99887665432 23333331 1 2368999999985321
Q ss_pred CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCC----CCCCCCCCHHHHHHHHHHHHHHHc--
Q 024494 156 LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVILEF-- 220 (267)
Q Consensus 156 ~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~----p~~p~~~~~y~~~k~~aE~~l~~~-- 220 (267)
.+ +.....+++. ...++++|||+||+.|||.....+++|++ |..|. ...|+.+|..+|++++.+
T Consensus 68 ~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 68 TYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPT-NEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred hCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCC-cchHHHHHHHHHHHHHHHHH
Confidence 11 1223444443 23478899999999999976667788876 33342 125999999999877643
Q ss_pred --C--eeEEeeCccccCCc-----------hHHHH----H-hCCccee--cCCCccccHHHHHHhh
Q 024494 221 --G--GCVLRLAGLYISLC-----------YLVEK----F-QGLPLLL--KSPGIFSANWHYICVK 264 (267)
Q Consensus 221 --~--~~IlR~~~iyGp~~-----------~~l~~----~-~g~~v~~--~~~~~~~n~IH~~~~~ 264 (267)
+ ++++||+.+|||+. .++.+ . .+.++.+ +++.++.++||..+++
T Consensus 147 ~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~ 212 (306)
T PLN02725 147 QYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLA 212 (306)
T ss_pred HhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHH
Confidence 3 89999999999973 12222 2 2555543 3455778999977654
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-17 Score=151.67 Aligned_cols=146 Identities=17% Similarity=0.171 Sum_probs=104.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch----hhhc------cC---eeeecCCcc----cc--CCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELIN------MG---ITPSLKWTE----AT--QKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~----~l~~------~~---v~~d~~d~~----~~--~~~ 143 (267)
+++|||+|+ |+||++|+++|+++ |++|++++|...... .+.. .+ +..|+.|++ .+ .++
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~ 82 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLA--GYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF 82 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence 478999996 99999999999999 999999987532211 1110 11 234555542 22 368
Q ss_pred CEEEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 144 PYVIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
|+|||+|+..... + +.....+++. ...++++||++||+++||...+.+++|++|..|. +.|+.+|
T Consensus 83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK 160 (352)
T PLN02240 83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSAT--NPYGRTK 160 (352)
T ss_pred CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--CHHHHHH
Confidence 9999999854221 1 1222334432 2346789999999999987666789999988874 6899999
Q ss_pred HHHHHHHHHc-----C--eeEEeeCccccC
Q 024494 211 LKAEKVILEF-----G--GCVLRLAGLYIS 233 (267)
Q Consensus 211 ~~aE~~l~~~-----~--~~IlR~~~iyGp 233 (267)
.++|++++.+ + .+++|++++||+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~ 190 (352)
T PLN02240 161 LFIEEICRDIHASDPEWKIILLRYFNPVGA 190 (352)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeecCcCCC
Confidence 9999988643 2 688999999986
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-17 Score=151.10 Aligned_cols=145 Identities=16% Similarity=0.154 Sum_probs=102.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhc---cC---eeeecCCcc----cc--CCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN---MG---ITPSLKWTE----AT--QKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~---~~---v~~d~~d~~----~~--~~~D~Vi 147 (267)
|+|||||+ |+||++|+++|+++ |++|++++|....... +.. .. +..|+.|++ .+ .++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHC--CCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 68999995 99999999999999 9999999875332111 111 11 234555542 22 2689999
Q ss_pred EccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCC-CCCCCCHHHHHHHHH
Q 024494 148 FCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKA 213 (267)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~-~p~~~~~y~~~k~~a 213 (267)
|+|+..... . +.....+++. ...++++||++||+++||.....+++|++|. .| .+.|+.+|.++
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p--~~~Y~~sK~~~ 156 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTP--QSPYGKSKLMV 156 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCC--CChhHHHHHHH
Confidence 999854321 1 1223334432 2347889999999999997665678999886 45 46899999999
Q ss_pred HHHHHHc-----C--eeEEeeCccccC
Q 024494 214 EKVILEF-----G--GCVLRLAGLYIS 233 (267)
Q Consensus 214 E~~l~~~-----~--~~IlR~~~iyGp 233 (267)
|++++++ + ++++|++.+||+
T Consensus 157 E~~~~~~~~~~~~~~~~ilR~~~v~g~ 183 (338)
T PRK10675 157 EQILTDLQKAQPDWSIALLRYFNPVGA 183 (338)
T ss_pred HHHHHHHHHhcCCCcEEEEEeeeecCC
Confidence 9988753 2 789999998886
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=140.49 Aligned_cols=162 Identities=19% Similarity=0.185 Sum_probs=116.4
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCc----cccCCCCEEEEccCCCCCCCh
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWT----EATQKFPYVIFCAPPSRSLDY 158 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~----~~~~~~D~Vi~~a~~~~~~~~ 158 (267)
|+|+|+ |++|+.|+++|+++ ||+|++++|++++.+. ..+++. |..|+ +++.++|+||+++++...+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~--~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~-- 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRR--GHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKD-- 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTH--
T ss_pred eEEECCCChHHHHHHHHHHHC--CCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccc--
Confidence 789996 99999999999999 9999999999887654 345544 44454 3678999999999876542
Q ss_pred HHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCccccCC
Q 024494 159 PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYISL 234 (267)
Q Consensus 159 ~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~iyGp~ 234 (267)
.+..++++. +..+++++|++|+.++|+........+..+.. ..|.+.+.++|+.+++.+ |+++||+.+||+.
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~ 150 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIF----PEYARDKREAEEALRESGLNWTIVRPGWIYGNP 150 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGG----HHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTT
T ss_pred ccccccccccccccccccceeeeccccCCCCCcccccccccch----hhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCC
Confidence 444555543 34689999999999999865543333322221 367788999999999877 9999999999997
Q ss_pred chHHHHHhCCcceecCCCccccHHHHHHhh
Q 024494 235 CYLVEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 235 ~~~l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
.. ...+...++....++||+.++|
T Consensus 151 ~~------~~~~~~~~~~~~~~~i~~~DvA 174 (183)
T PF13460_consen 151 SR------SYRLIKEGGPQGVNFISREDVA 174 (183)
T ss_dssp SS------SEEEESSTSTTSHCEEEHHHHH
T ss_pred Cc------ceeEEeccCCCCcCcCCHHHHH
Confidence 33 1111111333455777776654
|
... |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=151.89 Aligned_cols=176 Identities=18% Similarity=0.123 Sum_probs=119.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhh------ccCe---eeecCCcc----ccC--C
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI------NMGI---TPSLKWTE----ATQ--K 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~------~~~v---~~d~~d~~----~~~--~ 142 (267)
+++|||||+ ||||++|+++|+++ |++|++++|++.. ...+. ..++ ..|+.|.+ .+. +
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSK--GYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHC--CCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 478999996 99999999999999 9999999987542 11111 0112 34555542 232 5
Q ss_pred CCEEEEccCCCCCC------C-----hHHHHHHHHHHh--CCCC-----cEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL------D-----YPGDVRLAALSW--NGEG-----SFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~------~-----~~~~~~~l~~~~--~~v~-----r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
+|+|||+|+..... + +..+..+++.+. .+++ +||++||..+||.... +++|+.|..|. +
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~~p~--~ 160 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPFHPR--S 160 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCCCCC--C
Confidence 79999999864321 1 122233443221 2443 8999999999997654 78899988874 6
Q ss_pred HHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc--h--------HHHHH-hCCcc--eecCCCccccHHHHHHhh
Q 024494 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC--Y--------LVEKF-QGLPL--LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~--~--------~l~~~-~g~~v--~~~~~~~~~n~IH~~~~~ 264 (267)
.|+.+|.++|.+++.+ + ++..|+.+.|||+. . ++.++ .|++. +.+++.+..++||.-+++
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a 239 (340)
T PLN02653 161 PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYV 239 (340)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHH
Confidence 8999999999998664 3 57889999999962 1 12334 35543 335556788888865543
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.3e-17 Score=152.44 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=101.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c----C---eeeecCCc----cccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----G---ITPSLKWT----EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~----~---v~~d~~d~----~~~~~~D~Vi~ 148 (267)
++|||||+ ||||++|+++|+++ |++|++++|+++....+.. . . +..|+.|. +.+.++|+|||
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHC--CCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 78999996 99999999999999 9999999998655432211 0 1 23455554 34668999999
Q ss_pred ccCCCCCC--C--------hHHHHHHHHHHh--CC-CCcEEEEcCCccccCCC-CCc-cCCCCCC-------CCCCCCHH
Q 024494 149 CAPPSRSL--D--------YPGDVRLAALSW--NG-EGSFLFTSSSAIYDCSD-NGA-CDEDSPV-------VPIGRSPR 206 (267)
Q Consensus 149 ~a~~~~~~--~--------~~~~~~~l~~~~--~~-v~r~V~~SS~~VYg~~~-~~~-~~E~~p~-------~p~~~~~y 206 (267)
+|+..... + ++.++.+++.+. .+ +++|||+||.++|+... ..+ ++|+... .+.+.++|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY 163 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence 99854211 1 233444554322 24 68999999998876532 222 4665321 11113589
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
+.+|..+|++++.+ + ++++||+++|||+
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~ 197 (351)
T PLN02650 164 FVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPF 197 (351)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEECCCceECCC
Confidence 99999999987664 3 8999999999997
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.6e-17 Score=150.59 Aligned_cols=163 Identities=23% Similarity=0.212 Sum_probs=113.3
Q ss_pred CCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--h-hhh---ccCeee---ecCCc----cccCCCCEEEEc
Q 024494 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHH--D-ELI---NMGITP---SLKWT----EATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~-~l~---~~~v~~---d~~d~----~~~~~~D~Vi~~ 149 (267)
|.++|||| +||+|++|+++|+++.+..+|.++|..+... . +.. ...++. |+.|. .++.++ .|+||
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~ 82 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHC 82 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEe
Confidence 46899997 6999999999999993338999999876421 1 111 223333 33332 467888 78887
Q ss_pred cCCCCCC-----------ChHHHHHHHHHH--hCCCCcEEEEcCCccccCCCC-CccCCCCCCCCCCCCHHHHHHHHHHH
Q 024494 150 APPSRSL-----------DYPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKAEK 215 (267)
Q Consensus 150 a~~~~~~-----------~~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~-~~~~E~~p~~p~~~~~y~~~k~~aE~ 215 (267)
|+....+ .+++++++++++ ..+++++||+||.+|+..... ...+|+.|........|+++|+.+|+
T Consensus 83 aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~ 162 (361)
T KOG1430|consen 83 AASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEK 162 (361)
T ss_pred ccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHH
Confidence 7643211 156777777643 458999999999999865443 45677776543223589999999999
Q ss_pred HHHHcC------eeEEeeCccccCCc-----hHHHHHh-CCcce
Q 024494 216 VILEFG------GCVLRLAGLYISLC-----YLVEKFQ-GLPLL 247 (267)
Q Consensus 216 ~l~~~~------~~IlR~~~iyGp~~-----~~l~~~~-g~~v~ 247 (267)
++++.. +++|||++||||+. .+++.++ |+...
T Consensus 163 ~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f 206 (361)
T KOG1430|consen 163 LVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLF 206 (361)
T ss_pred HHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceE
Confidence 998864 89999999999993 2334444 55443
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.7e-17 Score=145.72 Aligned_cols=167 Identities=19% Similarity=0.229 Sum_probs=115.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhhcc----CeeeecCCc--cccCCCCEEEEccCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINM----GITPSLKWT--EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~~~----~v~~d~~d~--~~~~~~D~Vi~~a~~~~~ 155 (267)
.++|+|+|+ ||||+||++.|..+ ||+|+++|.--... ..+..+ .++....|. ..+.++|.|+|+|++..+
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm~e--gh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapasp 104 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLMTE--GHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPASP 104 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHHhc--CCeEEEEecccccchhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCCCC
Confidence 489999985 99999999999999 99999999732221 122211 122222221 267899999999998755
Q ss_pred CCh------------HHHHHHHHHHhCCCCcEEEEcCCccccCCCCCccCCCCCC--CCCC-CCHHHHHHHHHHHHHHHc
Q 024494 156 LDY------------PGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV--VPIG-RSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 156 ~~~------------~~~~~~l~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~--~p~~-~~~y~~~k~~aE~~l~~~ 220 (267)
..| ...+..+.++..-.+||+++||+.|||++...+..|+... +|.+ +..|+..|+.+|.++..+
T Consensus 105 ~~y~~npvktIktN~igtln~lglakrv~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y 184 (350)
T KOG1429|consen 105 PHYKYNPVKTIKTNVIGTLNMLGLAKRVGARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAY 184 (350)
T ss_pred cccccCccceeeecchhhHHHHHHHHHhCceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHh
Confidence 332 1222223234333489999999999999876676666532 2221 468999999999999988
Q ss_pred C------eeEEeeCccccCCc---------hHH-HHHhCCcceecCCC
Q 024494 221 G------GCVLRLAGLYISLC---------YLV-EKFQGLPLLLKSPG 252 (267)
Q Consensus 221 ~------~~IlR~~~iyGp~~---------~~l-~~~~g~~v~~~~~~ 252 (267)
+ +.|.|+.+.|||.. .|. +.+++.|+.+-+++
T Consensus 185 ~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G 232 (350)
T KOG1429|consen 185 HKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDG 232 (350)
T ss_pred hcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCC
Confidence 5 89999999999982 233 34468888665544
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.9e-17 Score=148.05 Aligned_cols=179 Identities=17% Similarity=0.112 Sum_probs=122.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh---hhcc--------CeeeecCCc----cccCCCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LINM--------GITPSLKWT----EATQKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~---l~~~--------~v~~d~~d~----~~~~~~D~V 146 (267)
++++|+|||+ ||||++++++|+++ ||.|.++.|+++.... +.+. -+..|+.|. +++.+||.|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~r--GY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgV 82 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSR--GYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGV 82 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhC--CCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEE
Confidence 4589999997 99999999999999 9999999999876322 2221 134466665 477899999
Q ss_pred EEccCCCCCCC----------hHHHHHHHHHHh--C-CCCcEEEEcCCccccCC-----CCCccCCCCCCCCCC----CC
Q 024494 147 IFCAPPSRSLD----------YPGDVRLAALSW--N-GEGSFLFTSSSAIYDCS-----DNGACDEDSPVVPIG----RS 204 (267)
Q Consensus 147 i~~a~~~~~~~----------~~~~~~~l~~~~--~-~v~r~V~~SS~~VYg~~-----~~~~~~E~~p~~p~~----~~ 204 (267)
||+|.|...+. -++++.+++.+. . .|+|+||+||++.-..+ .+..++|+.-.++.- ..
T Consensus 83 fH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~ 162 (327)
T KOG1502|consen 83 FHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKL 162 (327)
T ss_pred EEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHH
Confidence 99999865421 245566665432 2 48999999998765432 223566655332210 13
Q ss_pred HHHHHHHHHHHHHHHcC------eeEEeeCccccCCc---------hHHHHHhCCcceecCCCccccHHHHHHhhh
Q 024494 205 PRTDVLLKAEKVILEFG------GCVLRLAGLYISLC---------YLVEKFQGLPLLLKSPGIFSANWHYICVKL 265 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~~------~~IlR~~~iyGp~~---------~~l~~~~g~~v~~~~~~~~~n~IH~~~~~~ 265 (267)
.|..+|..+|+...++. .+.+-|+.|+||.- ..++.++|..-.. +..+.-+||..++|.
T Consensus 163 ~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~--~n~~~~~VdVrDVA~ 236 (327)
T KOG1502|consen 163 WYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY--PNFWLAFVDVRDVAL 236 (327)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC--CCCceeeEeHHHHHH
Confidence 58889999999887763 78899999999981 2334555532222 223555888877764
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.6e-17 Score=146.06 Aligned_cols=175 Identities=15% Similarity=0.123 Sum_probs=116.4
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCC--C---chhhhc-cC---eeeecCCcc----ccCC--CCEEE
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTAD--H---HDELIN-MG---ITPSLKWTE----ATQK--FPYVI 147 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~--~---~~~l~~-~~---v~~d~~d~~----~~~~--~D~Vi 147 (267)
+|||||+ |+||++|+++|+++ | ++|++++|... . ...+.. .+ +..|+.|++ .+++ +|+||
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 78 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNE--HPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVV 78 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHh--CCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEE
Confidence 5899995 99999999999998 6 79999887421 1 111111 12 234555542 3444 89999
Q ss_pred EccCCCCCC----C-------hHHHHHHHHHHh--CCC-CcEEEEcCCccccCCCCC-ccCCCCCCCCCCCCHHHHHHHH
Q 024494 148 FCAPPSRSL----D-------YPGDVRLAALSW--NGE-GSFLFTSSSAIYDCSDNG-ACDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~~~~--~~v-~r~V~~SS~~VYg~~~~~-~~~E~~p~~p~~~~~y~~~k~~ 212 (267)
|+|+....+ . +..+..+++... .+. .++|++||.++||..... +++|+.+..|. +.|+.+|..
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~--~~Y~~sK~~ 156 (317)
T TIGR01181 79 HFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS--SPYSASKAA 156 (317)
T ss_pred EcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC--CchHHHHHH
Confidence 999864321 1 122233443222 223 389999999999875432 68888887774 589999999
Q ss_pred HHHHHHHc----C--eeEEeeCccccCCc-------hHHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 213 AEKVILEF----G--GCVLRLAGLYISLC-------YLVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 213 aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
+|.+++.+ + ++++|++.+|||++ .++..+ .++++.+ ..+.++.++||..+++
T Consensus 157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a 223 (317)
T TIGR01181 157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHC 223 (317)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHH
Confidence 99987653 3 89999999999972 233334 3665544 3445678898876553
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-16 Score=149.33 Aligned_cols=151 Identities=18% Similarity=0.089 Sum_probs=104.1
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----------Ce---eeecCCc----cccCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----------GI---TPSLKWT----EATQK 142 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----------~v---~~d~~d~----~~~~~ 142 (267)
.++++|||||+ ||||++|+++|+++ |++|++++|+.+....+... ++ ..|+.|. +.+.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~--G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRH--GYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 34588999996 99999999999999 99999998875543322110 22 2355554 24678
Q ss_pred CCEEEEccCCCCCC------C-----hHHHHHHHHHHh--C-CCCcEEEEcCC--ccccCC--CC--CccCCCCCCC---
Q 024494 143 FPYVIFCAPPSRSL------D-----YPGDVRLAALSW--N-GEGSFLFTSSS--AIYDCS--DN--GACDEDSPVV--- 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~------~-----~~~~~~~l~~~~--~-~v~r~V~~SS~--~VYg~~--~~--~~~~E~~p~~--- 199 (267)
+|+|||+++..... . ..+++.+++.+. . ++++|||+||. .+||.. .. ..++|+++..
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~ 208 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF 208 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence 99999998753211 1 234455665432 2 68999999996 478742 11 3466654321
Q ss_pred -CCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 200 -PIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 -p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
+.+.+.|+.+|+.+|+++..+ + ++++||+++|||+
T Consensus 209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~ 250 (367)
T PLN02686 209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG 250 (367)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence 111357999999999998653 3 8999999999997
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.5e-17 Score=143.67 Aligned_cols=175 Identities=16% Similarity=0.156 Sum_probs=122.4
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCC---CCCchhhhc----cC---eeeecCCc------cccCCCCEEE
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMT---ADHHDELIN----MG---ITPSLKWT------EATQKFPYVI 147 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~---~~~~~~l~~----~~---v~~d~~d~------~~~~~~D~Vi 147 (267)
+++||+| +||||++.+..+...+|.+..+.++-- .. ...+.+ .. +..|+.+. ..-++.|.|+
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence 7899997 699999999999999999888777652 11 212211 11 22334332 1335899999
Q ss_pred EccCCCCCCC-----------hHHHHHHHHHH---hCCCCcEEEEcCCccccCCCCCccC-CCCCCCCCCCCHHHHHHHH
Q 024494 148 FCAPPSRSLD-----------YPGDVRLAALS---WNGEGSFLFTSSSAIYDCSDNGACD-EDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~l~~~---~~~v~r~V~~SS~~VYg~~~~~~~~-E~~p~~p~~~~~y~~~k~~ 212 (267)
|.|+....+. ++-....++.+ ..++++||++||..|||+.+..+.. |.+.++|. ++|+.+|++
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPt--npyAasKaA 163 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPT--NPYAASKAA 163 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCC--CchHHHHHH
Confidence 9998664321 11112233222 2368999999999999998776666 88888885 799999999
Q ss_pred HHHHHHHcC------eeEEeeCccccCCch-------HHHHH-hCCccee-cCCCccccHHHHHH
Q 024494 213 AEKVILEFG------GCVLRLAGLYISLCY-------LVEKF-QGLPLLL-KSPGIFSANWHYIC 262 (267)
Q Consensus 213 aE~~l~~~~------~~IlR~~~iyGp~~~-------~l~~~-~g~~v~~-~~~~~~~n~IH~~~ 262 (267)
+|..++.++ ++++|..+||||+++ |++.. ++.+..+ +.+.+..+++|.-+
T Consensus 164 aE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD 228 (331)
T KOG0747|consen 164 AEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVED 228 (331)
T ss_pred HHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHH
Confidence 999999875 899999999999953 33333 3555544 34448889988543
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.7e-16 Score=154.67 Aligned_cols=147 Identities=17% Similarity=0.080 Sum_probs=100.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHh--cCCCCeEEEEeCCCCCc--hhhh-c---cCe---eeecCCc---------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQ--EHPGCQIYGQTMTADHH--DELI-N---MGI---TPSLKWT---------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~--~~pG~~V~~l~R~~~~~--~~l~-~---~~v---~~d~~d~---------~~~~~~ 143 (267)
|+|||||+ ||||++|+++|++ + |++|++++|++... ..+. . ..+ ..|+.|+ +.+.++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~--g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRR--EATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAELGDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCC--CCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHhcCC
Confidence 58999996 9999999999994 6 99999999965321 1110 0 122 2344442 123789
Q ss_pred CEEEEccCCCCCCC--------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCC-CCCCCHHHHHHHH
Q 024494 144 PYVIFCAPPSRSLD--------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV-PIGRSPRTDVLLK 212 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~-p~~~~~y~~~k~~ 212 (267)
|+|||||+...... +++++++++. ...++++|||+||.++||... ...+|+.... ....+.|+++|.+
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~-~~~~e~~~~~~~~~~~~Y~~sK~~ 157 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYE-GVFREDDFDEGQGLPTPYHRTKFE 157 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCcc-CccccccchhhcCCCCchHHHHHH
Confidence 99999998643211 3444555543 234689999999999998654 3345543221 1113579999999
Q ss_pred HHHHHHHc-C--eeEEeeCccccCC
Q 024494 213 AEKVILEF-G--GCVLRLAGLYISL 234 (267)
Q Consensus 213 aE~~l~~~-~--~~IlR~~~iyGp~ 234 (267)
+|+++++. + ++|+||+.+||++
T Consensus 158 ~E~~~~~~~g~~~~ilRp~~v~G~~ 182 (657)
T PRK07201 158 AEKLVREECGLPWRVYRPAVVVGDS 182 (657)
T ss_pred HHHHHHHcCCCcEEEEcCCeeeecC
Confidence 99999853 3 8999999999985
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.7e-16 Score=145.09 Aligned_cols=164 Identities=16% Similarity=0.162 Sum_probs=112.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch------hhh--ccC---eeeecCCcc----ccC----C
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD------ELI--NMG---ITPSLKWTE----ATQ----K 142 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~------~l~--~~~---v~~d~~d~~----~~~----~ 142 (267)
.+++|||+|+ |+||++++++|+++ |++|++++|++.+.. .+. ..+ +..|+.|++ .++ +
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRR--GYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 4589999996 99999999999999 999999999865421 010 112 334666652 233 6
Q ss_pred CCEEEEccCCCCC--CC----hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 143 FPYVIFCAPPSRS--LD----YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 143 ~D~Vi~~a~~~~~--~~----~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
+|+||||++.... .+ ......+++. ...++++||++||..+|+ | ...|.++|.+.|
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~--------------p--~~~~~~sK~~~E 200 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQK--------------P--LLEFQRAKLKFE 200 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccC--------------c--chHHHHHHHHHH
Confidence 9999999875321 11 1233445443 235789999999998763 1 125778899999
Q ss_pred HHHHH--cC--eeEEeeCccccCCchHHHHHh-CCcceecCCCc--cccHHHHHHhh
Q 024494 215 KVILE--FG--GCVLRLAGLYISLCYLVEKFQ-GLPLLLKSPGI--FSANWHYICVK 264 (267)
Q Consensus 215 ~~l~~--~~--~~IlR~~~iyGp~~~~l~~~~-g~~v~~~~~~~--~~n~IH~~~~~ 264 (267)
+.+++ .+ ++|+||+++||+...+++++. |.++.+.+++. +.++||..+++
T Consensus 201 ~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA 257 (390)
T PLN02657 201 AELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLA 257 (390)
T ss_pred HHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHH
Confidence 99876 44 999999999987655566664 77775544442 34678866653
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.1e-15 Score=138.15 Aligned_cols=145 Identities=23% Similarity=0.261 Sum_probs=102.5
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhhcc----Ce---eeecCCcc----cc--CCCCEEEEcc
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINM----GI---TPSLKWTE----AT--QKFPYVIFCA 150 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~~~----~v---~~d~~d~~----~~--~~~D~Vi~~a 150 (267)
||||+|+ |+||++|+++|+++ |++|++++|..... ..+... ++ ..|+.+.+ .+ .++|+|||+|
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~--g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~a 78 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLES--GHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFA 78 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhC--CCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECc
Confidence 5899986 99999999999999 99999887643221 111111 12 23444442 22 3799999999
Q ss_pred CCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024494 151 PPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (267)
Q Consensus 151 ~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l 217 (267)
+..... + +.....+++. ...+++++|++||..+||.....+++|+++..|. +.|+.+|..+|..+
T Consensus 79 g~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~--~~y~~sK~~~e~~~ 156 (328)
T TIGR01179 79 GLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPI--NPYGRSKLMSERIL 156 (328)
T ss_pred cccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCC--CchHHHHHHHHHHH
Confidence 864221 1 1223333332 2346789999999999987665678999887764 58999999999987
Q ss_pred HHc-----C--eeEEeeCccccCC
Q 024494 218 LEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 218 ~~~-----~--~~IlR~~~iyGp~ 234 (267)
+.+ + ++|+||+.+||+.
T Consensus 157 ~~~~~~~~~~~~~ilR~~~v~g~~ 180 (328)
T TIGR01179 157 RDLSKADPGLSYVILRYFNVAGAD 180 (328)
T ss_pred HHHHHhccCCCEEEEecCcccCCC
Confidence 753 3 8999999999984
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-15 Score=138.76 Aligned_cols=176 Identities=11% Similarity=0.007 Sum_probs=111.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc------hhhh--ccCe---eeecCCc----cccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH------DELI--NMGI---TPSLKWT----EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~------~~l~--~~~v---~~d~~d~----~~~~~~D~Vi~ 148 (267)
++|||||+ |+||++++++|+++ ||+|++++|+.... ..+. ..++ ..|+.|. +.+.++|.|+|
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~--G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSR--GYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 68999996 99999999999999 99999999964321 1111 0122 3455554 36778999999
Q ss_pred ccCCCCCC--C-------hHHHHHHHHHHh--C-CCCcEEEEcCCccc--cCC---CCCccCCCCCCCCC----CCCHHH
Q 024494 149 CAPPSRSL--D-------YPGDVRLAALSW--N-GEGSFLFTSSSAIY--DCS---DNGACDEDSPVVPI----GRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~--~-------~~~~~~~l~~~~--~-~v~r~V~~SS~~VY--g~~---~~~~~~E~~p~~p~----~~~~y~ 207 (267)
++++.... + ++.++.+++.+. . ++++||++||.+.+ +.. ...+++|+.+..+. ....|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 87653221 1 233444554322 2 57899999998765 311 12357777653321 012699
Q ss_pred HHHHHHHHHHHHc----C--eeEEeeCccccCCchH-HHHHhCCcceecCCCccccHHHHHHhh
Q 024494 208 DVLLKAEKVILEF----G--GCVLRLAGLYISLCYL-VEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 208 ~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~~~-l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
.+|..+|+.+.++ + ++++||+.+|||+... ...+.+.....+++ ..++||.-++|
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~--~~~~v~V~Dva 226 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNPYLKGAAQMYENG--VLVTVDVNFLV 226 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchhhhcCCcccCccc--CcceEEHHHHH
Confidence 9999999998653 3 8999999999998422 22233332222222 34577755543
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.8e-15 Score=133.75 Aligned_cols=150 Identities=15% Similarity=0.108 Sum_probs=98.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCCCC------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL------ 156 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~~~------ 156 (267)
.|||||||+ ||||++|+++|+++ |++|+...++......+ ..++. ..++|+|||||+.....
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~--g~~V~~~~~~~~~~~~v-----~~~l~----~~~~D~ViH~Aa~~~~~~~~~~~ 77 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQ--GIDFHYGSGRLENRASL-----EADID----AVKPTHVFNAAGVTGRPNVDWCE 77 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhC--CCEEEEecCccCCHHHH-----HHHHH----hcCCCEEEECCcccCCCCchhhh
Confidence 379999995 99999999999999 99998654332221111 11111 13799999999865321
Q ss_pred -C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCC------CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024494 157 -D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSD------NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 157 -~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~------~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
+ ++.+..+++.. ..+++ +|++||..||+... +.+++|++++.+. .+.|+++|+++|++++.+
T Consensus 78 ~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~-~s~Yg~sK~~~E~~~~~y 155 (298)
T PLN02778 78 SHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFT-GSFYSKTKAMVEELLKNY 155 (298)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCCcCCCCCCC-CCchHHHHHHHHHHHHHh
Confidence 1 12233444332 23564 67778888886432 2246766655442 368999999999999987
Q ss_pred C-eeEEeeCccccCC----chHHHHH-hCCcc
Q 024494 221 G-GCVLRLAGLYISL----CYLVEKF-QGLPL 246 (267)
Q Consensus 221 ~-~~IlR~~~iyGp~----~~~l~~~-~g~~v 246 (267)
. ..++|+...+|++ ..++..+ .+.++
T Consensus 156 ~~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~ 187 (298)
T PLN02778 156 ENVCTLRVRMPISSDLSNPRNFITKITRYEKV 187 (298)
T ss_pred hccEEeeecccCCcccccHHHHHHHHHcCCCe
Confidence 6 7889998888875 2455655 45554
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.8e-15 Score=132.44 Aligned_cols=148 Identities=18% Similarity=0.104 Sum_probs=99.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cCe---eeecCCc-----ccc-CCCCEEEEcc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGI---TPSLKWT-----EAT-QKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~v---~~d~~d~-----~~~-~~~D~Vi~~a 150 (267)
.||+|||+|+ |+||+.|+++|+++ ||+|++++|++++...+.. .++ ..|+.|. +.+ .++|+||+++
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAK--GFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhC--CCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 3589999996 99999999999999 9999999998765433211 123 2355542 234 5899999998
Q ss_pred CCCCC-CC------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCC-CCCCCCHHHHHHHHHHHHHHHc
Q 024494 151 PPSRS-LD------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 151 ~~~~~-~~------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~-~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
+.... +. +..+..+++. ...++++||++||.++||...+.+..+.+.. .+ ...+...|..+|+++++.
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~--~~~~~~~k~~~e~~l~~~ 171 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNL--FGLTLVAKLQAEKYIRKS 171 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHH--HHHHHHHHHHHHHHHHhc
Confidence 86421 11 1223444432 2347899999999999986432222221110 11 123445688899988887
Q ss_pred C--eeEEeeCccccCC
Q 024494 221 G--GCVLRLAGLYISL 234 (267)
Q Consensus 221 ~--~~IlR~~~iyGp~ 234 (267)
+ ++++||+++++..
T Consensus 172 gi~~~iirpg~~~~~~ 187 (251)
T PLN00141 172 GINYTIVRPGGLTNDP 187 (251)
T ss_pred CCcEEEEECCCccCCC
Confidence 7 9999999999875
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.5e-15 Score=136.29 Aligned_cols=162 Identities=15% Similarity=0.094 Sum_probs=107.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhh----ccCe---eeecCCc----cccCCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELI----NMGI---TPSLKWT----EATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~----~~~v---~~d~~d~----~~~~~~D~Vi~~ 149 (267)
.|+|||||+ |+||++|+++|+++ | ++|++++|+......+. ...+ ..|+.|+ +.+.++|+|||+
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~--g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLEN--YNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHh--CCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 378999995 99999999999998 6 79999998765432221 1122 3466665 245689999999
Q ss_pred cCCCCCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Q 024494 150 APPSRSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 150 a~~~~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~ 216 (267)
|+..... + ++.+..+++.+ ..++++||++||... ..| .++|+.+|..+|++
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~--------------~~p--~~~Y~~sK~~~E~l 145 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA--------------ANP--INLYGATKLASDKL 145 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC--------------CCC--CCHHHHHHHHHHHH
Confidence 9864321 1 12233444322 246789999998532 223 25799999999998
Q ss_pred HHHc-------C--eeEEeeCccccCCch----HHHHHh-CC-cceecCCCccccHHHHHHh
Q 024494 217 ILEF-------G--GCVLRLAGLYISLCY----LVEKFQ-GL-PLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 217 l~~~-------~--~~IlR~~~iyGp~~~----~l~~~~-g~-~v~~~~~~~~~n~IH~~~~ 263 (267)
++.+ + ++++||+++|||+.. +.+.+. +. ++.+.++.+...+||.-++
T Consensus 146 ~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~ 207 (324)
T TIGR03589 146 FVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPITDPRMTRFWITLEQG 207 (324)
T ss_pred HHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHH
Confidence 7542 3 899999999999743 333343 54 4555445566667775543
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-14 Score=132.20 Aligned_cols=146 Identities=14% Similarity=0.142 Sum_probs=98.4
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCch---hhh----c----------cCeee---ecCCc-----
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHD---ELI----N----------MGITP---SLKWT----- 137 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~---~l~----~----------~~v~~---d~~d~----- 137 (267)
+|||||+ |+||++|+++|+++ | ++|++++|+.+... .+. . ..+.. |+.++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~--g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~ 78 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRR--STQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLS 78 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhC--CCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcC
Confidence 5899996 99999999999999 8 67999999865321 110 0 12322 33221
Q ss_pred -----cccCCCCEEEEccCCCCCC-C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC-
Q 024494 138 -----EATQKFPYVIFCAPPSRSL-D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI- 201 (267)
Q Consensus 138 -----~~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~- 201 (267)
....++|+|||+|+..... . ++.++.+++. ...++++||++||.++|+........|+++..+.
T Consensus 79 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~ 158 (367)
T TIGR01746 79 DAEWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPP 158 (367)
T ss_pred HHHHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccc
Confidence 1346899999999865421 1 2334444432 2246778999999999986433333444433211
Q ss_pred --CCCHHHHHHHHHHHHHHHc---C--eeEEeeCccccC
Q 024494 202 --GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 --~~~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp 233 (267)
..+.|+.+|..+|++++++ + ++++||+.+||+
T Consensus 159 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 159 PGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGN 197 (367)
T ss_pred cccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeec
Confidence 1357999999999988765 3 899999999997
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-14 Score=140.66 Aligned_cols=177 Identities=13% Similarity=0.084 Sum_probs=110.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCch---hhh----c--------------------cCeee---
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHD---ELI----N--------------------MGITP--- 132 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~---~l~----~--------------------~~v~~--- 132 (267)
++|||||+ ||||++|+++|++..|+ .+|+++.|...... .+. . ..+++
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G 91 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG 91 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence 78999996 99999999999876334 37899999654211 110 0 11222
Q ss_pred ecC-------Cc----cccCCCCEEEEccCCCCCCC--------hHHHHHHHHHH--h-CCCCcEEEEcCCccccCCCCC
Q 024494 133 SLK-------WT----EATQKFPYVIFCAPPSRSLD--------YPGDVRLAALS--W-NGEGSFLFTSSSAIYDCSDNG 190 (267)
Q Consensus 133 d~~-------d~----~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~l~~~--~-~~v~r~V~~SS~~VYg~~~~~ 190 (267)
|+. +. ....++|+|||+|+...... ++.++.+++.. . .++++|||+||..|||...+
T Consensus 92 Dl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~- 170 (491)
T PLN02996 92 DISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSG- 170 (491)
T ss_pred ccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCc-
Confidence 332 21 13468999999998754322 34445555432 2 35789999999999987432
Q ss_pred ccCCCC-------------------------------------------------CC-CCCCCCHHHHHHHHHHHHHHHc
Q 024494 191 ACDEDS-------------------------------------------------PV-VPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 191 ~~~E~~-------------------------------------------------p~-~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
.+.|.. +. .....++|+.+|+.+|++++++
T Consensus 171 ~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~~~ 250 (491)
T PLN02996 171 LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLGNF 250 (491)
T ss_pred eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHHHh
Confidence 111100 00 0001257999999999999886
Q ss_pred C----eeEEeeCccccCCch----HH------HH----H-hCCcc-eecCCCccccHHHHHH
Q 024494 221 G----GCVLRLAGLYISLCY----LV------EK----F-QGLPL-LLKSPGIFSANWHYIC 262 (267)
Q Consensus 221 ~----~~IlR~~~iyGp~~~----~l------~~----~-~g~~v-~~~~~~~~~n~IH~~~ 262 (267)
. ++|+||+++||+++. |+ .. + +|... .++++.+..++||..+
T Consensus 251 ~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vdd 312 (491)
T PLN02996 251 KENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADM 312 (491)
T ss_pred cCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccH
Confidence 3 899999999999731 11 11 1 24433 3455667777777543
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.7e-14 Score=145.23 Aligned_cols=151 Identities=19% Similarity=0.151 Sum_probs=103.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccCCCCEEEEccCCCCCC--C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQKFPYVIFCAPPSRSL--D 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~~~D~Vi~~a~~~~~~--~ 157 (267)
|+|+|||+ |+||++|+++|+++ |++|++++|+...........+..|+.|. ..++++|+|||+|+..... .
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~--G~~Vv~l~R~~~~~~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~v 78 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQ--GHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHI 78 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCchhhcccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHHH
Confidence 58999996 99999999999999 99999999974321100001234566664 3467899999999864321 1
Q ss_pred hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCccccC
Q 024494 158 YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYIS 233 (267)
Q Consensus 158 ~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~iyGp 233 (267)
+..+..+++. ...++++||++||.. |.++|+++.+++ ++|+||+++|||
T Consensus 79 Nv~GT~nLLeAa~~~gvkr~V~iSS~~---------------------------K~aaE~ll~~~gl~~vILRp~~VYGP 131 (854)
T PRK05865 79 NIDGTANVLKAMAETGTGRIVFTSSGH---------------------------QPRVEQMLADCGLEWVAVRCALIFGR 131 (854)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCcH---------------------------HHHHHHHHHHcCCCEEEEEeceEeCC
Confidence 3445555543 234788999999853 678899888877 999999999999
Q ss_pred C-chHHHHHhCCcceec-CCCccccHHHHHHhh
Q 024494 234 L-CYLVEKFQGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 234 ~-~~~l~~~~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
+ ..++..+...++... .+.+..++||.-+++
T Consensus 132 ~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA 164 (854)
T PRK05865 132 NVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQ 164 (854)
T ss_pred ChHHHHHHHhcCceeccCCCCceEeeeeHHHHH
Confidence 8 345555434443332 223456788866543
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2e-14 Score=129.76 Aligned_cols=144 Identities=17% Similarity=0.205 Sum_probs=108.5
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhh------hc--cCe---eeecCCcc------ccCCCCE
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDEL------IN--MGI---TPSLKWTE------ATQKFPY 145 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l------~~--~~v---~~d~~d~~------~~~~~D~ 145 (267)
++||||| +||||+|.+-+|+++ |++|+++|.=.. ..+.+ .. ..+ +.|+.|.+ ...++|.
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~--gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~ 80 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKR--GYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDA 80 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhC--CCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCce
Confidence 6899998 599999999999999 999999986211 11111 11 233 34566642 3357999
Q ss_pred EEEccCCCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCC-CCCCCHHHHHHH
Q 024494 146 VIFCAPPSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV-PIGRSPRTDVLL 211 (267)
Q Consensus 146 Vi~~a~~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~-p~~~~~y~~~k~ 211 (267)
|+|.|+...... +.-+..+++. +..+++.+||.||+.|||.+..-+++|+.|.. | .++|+++|.
T Consensus 81 V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p--~~pyg~tK~ 158 (343)
T KOG1371|consen 81 VMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQP--TNPYGKTKK 158 (343)
T ss_pred EEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCC--CCcchhhhH
Confidence 999998544221 2233444432 34579999999999999998888999999998 5 579999999
Q ss_pred HHHHHHHHcC------eeEEeeCcccc
Q 024494 212 KAEKVILEFG------GCVLRLAGLYI 232 (267)
Q Consensus 212 ~aE~~l~~~~------~~IlR~~~iyG 232 (267)
..|+++.... .++||.++++|
T Consensus 159 ~iE~i~~d~~~~~~~~~~~LRyfn~~g 185 (343)
T KOG1371|consen 159 AIEEIIHDYNKAYGWKVTGLRYFNVIG 185 (343)
T ss_pred HHHHHHHhhhccccceEEEEEeccccC
Confidence 9999998764 78899999999
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.56 E-value=8.3e-14 Score=139.50 Aligned_cols=154 Identities=17% Similarity=0.134 Sum_probs=99.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEE-EEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC---CC-
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIY-GQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR---SL- 156 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~-~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~---~~- 156 (267)
++|||||||+ ||||++|++.|.++ |++|. ...+-.+ ...+ ...+ ...++|+|||||+... .+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~--g~~v~~~~~~l~d-~~~v-----~~~i----~~~~pd~Vih~Aa~~~~~~~~~ 446 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQ--GIAYEYGKGRLED-RSSL-----LADI----RNVKPTHVFNAAGVTGRPNVDW 446 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhC--CCeEEeecccccc-HHHH-----HHHH----HhhCCCEEEECCcccCCCCCCh
Confidence 4589999996 99999999999999 99984 3221000 0000 0001 1137999999998652 11
Q ss_pred ---C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCC------CCCccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024494 157 ---D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCS------DNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 157 ---~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~------~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
+ ++.++.+++.+ ..++ ++|++||..||+.. .+.+++|++++.|. .+.|+++|+++|++++
T Consensus 447 ~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~-~~~Yg~sK~~~E~~~~ 524 (668)
T PLN02260 447 CESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFT-GSFYSKTKAMVEELLR 524 (668)
T ss_pred HHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCCCcCCCCCCC-CChhhHHHHHHHHHHH
Confidence 1 23334455432 2355 57888999998642 12367887765553 3689999999999998
Q ss_pred HcC-eeEEeeCccccCC----chHHHHH-h-CCcceecC
Q 024494 219 EFG-GCVLRLAGLYISL----CYLVEKF-Q-GLPLLLKS 250 (267)
Q Consensus 219 ~~~-~~IlR~~~iyGp~----~~~l~~~-~-g~~v~~~~ 250 (267)
.+. ..++|+.++||.+ +.|+..+ + .+++.++.
T Consensus 525 ~~~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp~ 563 (668)
T PLN02260 525 EYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPN 563 (668)
T ss_pred hhhhheEEEEEEecccCCCCccHHHHHHhccceeeccCC
Confidence 876 7888999999653 4677655 3 33344443
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.3e-14 Score=124.52 Aligned_cols=145 Identities=17% Similarity=0.165 Sum_probs=80.9
Q ss_pred EEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc---hhh----h------------ccCeee---ecCCc--------
Q 024494 89 IVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DEL----I------------NMGITP---SLKWT-------- 137 (267)
Q Consensus 89 V~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~---~~l----~------------~~~v~~---d~~d~-------- 137 (267)
|||+ ||||++|+++|+++.+..+|+++.|..+.. +.+ . ...+++ |+.++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 6896 999999999999993223999999976431 111 0 112322 33332
Q ss_pred --cccCCCCEEEEccCCCCCC-C-------hHHHHHHHHH-Hh-CCCCcEEEEcCCccccCCCCCc------cCCCCC-C
Q 024494 138 --EATQKFPYVIFCAPPSRSL-D-------YPGDVRLAAL-SW-NGEGSFLFTSSSAIYDCSDNGA------CDEDSP-V 198 (267)
Q Consensus 138 --~~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~l~~-~~-~~v~r~V~~SS~~VYg~~~~~~------~~E~~p-~ 198 (267)
....++|+|||||+..... . ++.++++++. +. ...++|+|+||..+.+...+.. .+|+.. .
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 1336899999999976432 1 5677777763 33 3456999999955555433211 111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYIS 233 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp 233 (267)
.....+.|.++|..+|+++.++ + ++|+||+.|+|.
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~ 201 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGD 201 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-S
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCccccc
Confidence 1111358999999999998875 3 899999999994
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.4e-13 Score=121.00 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=100.2
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----cc------CC-CCEEEEccCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----AT------QK-FPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~------~~-~D~Vi~~a~~~ 153 (267)
+|||+|+ |++|++++++|+++ |++|++++|++++........+..|..|++ ++ .+ +|+|+++++..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~ 78 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAA--SVPFLVASRSSSSSAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPI 78 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhC--CCcEEEEeCCCccccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCC
Confidence 5899996 99999999999999 999999999987543211112345666542 33 56 99999998754
Q ss_pred CCCChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-C--eeEEeeC
Q 024494 154 RSLDYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVLRLA 228 (267)
Q Consensus 154 ~~~~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-~--~~IlR~~ 228 (267)
. +..+..++++. ...++++||++||.+++.. .+ .+...|+++++. + +++|||+
T Consensus 79 ~--~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~------------~~--------~~~~~~~~l~~~~gi~~tilRp~ 136 (285)
T TIGR03649 79 P--DLAPPMIKFIDFARSKGVRRFVLLSASIIEKG------------GP--------AMGQVHAHLDSLGGVEYTVLRPT 136 (285)
T ss_pred C--ChhHHHHHHHHHHHHcCCCEEEEeeccccCCC------------Cc--------hHHHHHHHHHhccCCCEEEEecc
Confidence 2 22334444443 3458999999998765421 01 122346677664 5 9999999
Q ss_pred ccccCCc--hHHHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 229 GLYISLC--YLVEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 229 ~iyGp~~--~~l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
++|+... .+...++ +..+..+.+....++||.-+++
T Consensus 137 ~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva 175 (285)
T TIGR03649 137 WFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIA 175 (285)
T ss_pred HHhhhhcccccccccccCCeEEecCCCCccCcccHHHHH
Confidence 9986542 2233343 3334434344567888866543
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.5e-13 Score=123.56 Aligned_cols=149 Identities=15% Similarity=0.102 Sum_probs=102.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc---hhhhc-------------cCeeeecCC---c-------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELIN-------------MGITPSLKW---T------- 137 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~---~~l~~-------------~~v~~d~~d---~------- 137 (267)
++||+||+ ||+|.+|+.+|+.+. ..+|++++|-.+.. ..+.+ ..+++...| +
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~-~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRS-DAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcC-CCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 47999997 999999999999984 46999999965422 11211 122322222 1
Q ss_pred ---cccCCCCEEEEccCCCCC--------CChHHHHHHHH-HHhCC-CCcEEEEcCCccccCCCCC----ccCCCCCCCC
Q 024494 138 ---EATQKFPYVIFCAPPSRS--------LDYPGDVRLAA-LSWNG-EGSFLFTSSSAIYDCSDNG----ACDEDSPVVP 200 (267)
Q Consensus 138 ---~~~~~~D~Vi~~a~~~~~--------~~~~~~~~~l~-~~~~~-v~r~V~~SS~~VYg~~~~~----~~~E~~p~~p 200 (267)
+..+.+|.|||+++..+. +.++.++..++ ++..+ .|.|.|+||++|+...... ..+|+.|..-
T Consensus 80 ~~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 80 TWQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCcccccccccccc
Confidence 244679999999986541 23666777665 34444 6779999999998654322 2222233221
Q ss_pred C---CCCHHHHHHHHHHHHHHHcC-----eeEEeeCccccCC
Q 024494 201 I---GRSPRTDVLLKAEKVILEFG-----GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~---~~~~y~~~k~~aE~~l~~~~-----~~IlR~~~iyGp~ 234 (267)
. ..++|+++|..+|.++++.+ ++|+||+.|-|+.
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS 201 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence 1 13689999999999999875 9999999999986
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=5.6e-13 Score=130.02 Aligned_cols=141 Identities=15% Similarity=0.097 Sum_probs=97.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------------------cCeeeecCCc----cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------------------MGITPSLKWT----EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------------------~~v~~d~~d~----~~~~ 141 (267)
+.|||+|+ |+||++++++|+++ |++|++++|+.++...+.. ..+..|+.|. +.+.
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~--G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 57999996 99999999999999 9999999998776543211 0133455554 3568
Q ss_pred CCCEEEEccCCCCCC--C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 142 KFPYVIFCAPPSRSL--D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~--~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
++|+|||++|..... + +..+..+++.+ ..+++|||++||.+++.... .+. .... ...|...|
T Consensus 159 giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~----p~~-~~~s--k~~~~~~K 231 (576)
T PLN03209 159 NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGF----PAA-ILNL--FWGVLCWK 231 (576)
T ss_pred CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCc----ccc-chhh--HHHHHHHH
Confidence 899999999865321 1 12234444432 24789999999988742110 011 1111 24577788
Q ss_pred HHHHHHHHHcC--eeEEeeCccccCC
Q 024494 211 LKAEKVILEFG--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~~--~~IlR~~~iyGp~ 234 (267)
..+|+.+.+.+ |+||||++++++.
T Consensus 232 raaE~~L~~sGIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 232 RKAEEALIASGLPYTIVRPGGMERPT 257 (576)
T ss_pred HHHHHHHHHcCCCEEEEECCeecCCc
Confidence 99999999887 9999999999875
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-13 Score=122.61 Aligned_cols=148 Identities=19% Similarity=0.176 Sum_probs=97.6
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc--------cCee-------eecCCc----cccC--CC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN--------MGIT-------PSLKWT----EATQ--KF 143 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~--------~~v~-------~d~~d~----~~~~--~~ 143 (267)
|||||+ |.||+.|+++|++. + .+++.++|++.+.-.+.. .++. .|+.|. ..+. ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~--~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRY--GPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCC--B-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhc--CCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCC
Confidence 799996 99999999999998 5 589999998765433321 1122 133443 2445 89
Q ss_pred CEEEEccCCCCCC---C--------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 144 PYVIFCAPPSRSL---D--------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 144 D~Vi~~a~~~~~~---~--------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
|+|||+|+..+.+ + ++-++++++.+ ..++++||++||--. .+|. +.||.+|
T Consensus 79 diVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA--------------v~Pt--nvmGatK 142 (293)
T PF02719_consen 79 DIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA--------------VNPT--NVMGATK 142 (293)
T ss_dssp SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC--------------SS----SHHHHHH
T ss_pred CEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc--------------CCCC--cHHHHHH
Confidence 9999999976532 1 23345566532 358999999998443 3353 6899999
Q ss_pred HHHHHHHHHcC---------eeEEeeCccccCC----chHHHHHh-CCcceecCCC
Q 024494 211 LKAEKVILEFG---------GCVLRLAGLYISL----CYLVEKFQ-GLPLLLKSPG 252 (267)
Q Consensus 211 ~~aE~~l~~~~---------~~IlR~~~iyGp~----~~~l~~~~-g~~v~~~~~~ 252 (267)
+.+|+++..++ ++++|+|++.|.. ..|.++++ |+|+.+..+.
T Consensus 143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~ 198 (293)
T PF02719_consen 143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPD 198 (293)
T ss_dssp HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT
T ss_pred HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCC
Confidence 99999998764 6899999999987 35667885 9999876554
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.4e-12 Score=128.66 Aligned_cols=145 Identities=15% Similarity=0.114 Sum_probs=96.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCch---hhh----c--------------------cC---ee
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHD---ELI----N--------------------MG---IT 131 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~---~l~----~--------------------~~---v~ 131 (267)
.++|||||+ ||||++|+++|++..|+ .+|+++.|...... .+. . .. +.
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 378999996 99999999999987444 37899999643221 110 0 01 22
Q ss_pred eecCCc----------cccCCCCEEEEccCCCCCCC--------hHHHHHHHHHH--h-CCCCcEEEEcCCccccCCCCC
Q 024494 132 PSLKWT----------EATQKFPYVIFCAPPSRSLD--------YPGDVRLAALS--W-NGEGSFLFTSSSAIYDCSDNG 190 (267)
Q Consensus 132 ~d~~d~----------~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~l~~~--~-~~v~r~V~~SS~~VYg~~~~~ 190 (267)
.|+.++ ....++|+|||+|+....+. ++.++.+++.. . ...++|||+||..|||...+
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G- 277 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG- 277 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC-
Confidence 344443 12357999999999765332 34445555432 2 24678999999999997642
Q ss_pred ccCCC-CC---------------------------------------------------------CCCCCCCHHHHHHHH
Q 024494 191 ACDED-SP---------------------------------------------------------VVPIGRSPRTDVLLK 212 (267)
Q Consensus 191 ~~~E~-~p---------------------------------------------------------~~p~~~~~y~~~k~~ 212 (267)
.+.|. .| ..+. .+.|..+|..
T Consensus 278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~-pNtYt~TK~l 356 (605)
T PLN02503 278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGW-QDTYVFTKAM 356 (605)
T ss_pred eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCC-CChHHHHHHH
Confidence 22221 11 0111 2689999999
Q ss_pred HHHHHHHcC----eeEEeeCcc
Q 024494 213 AEKVILEFG----GCVLRLAGL 230 (267)
Q Consensus 213 aE~~l~~~~----~~IlR~~~i 230 (267)
+|+++++.. ++|+||+.|
T Consensus 357 AE~lV~~~~~~LPv~IvRPsiV 378 (605)
T PLN02503 357 GEMVINSMRGDIPVVIIRPSVI 378 (605)
T ss_pred HHHHHHHhcCCCCEEEEcCCEe
Confidence 999999764 899999999
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.6e-12 Score=128.39 Aligned_cols=125 Identities=21% Similarity=0.150 Sum_probs=85.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc---cccCCCCEEEEccCCCCCC---C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT---EATQKFPYVIFCAPPSRSL---D 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~---~~~~~~D~Vi~~a~~~~~~---~ 157 (267)
|||||||+ ||||++|+++|+++ ||+|++++|.+.......-.-+..|+.|+ +.+.++|+|||+|+..... .
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~--G~~Vi~ldr~~~~~~~~~ve~v~~Dl~d~~l~~al~~~D~VIHLAa~~~~~~~~v 78 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAA--GHTVSGIAQHPHDALDPRVDYVCASLRNPVLQELAGEADAVIHLAPVDTSAPGGV 78 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCChhhcccCCceEEEccCCCHHHHHHhcCCCEEEEcCccCccchhhH
Confidence 58999995 99999999999999 99999999875432110001123355554 2456899999999864322 2
Q ss_pred hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCccccC
Q 024494 158 YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYIS 233 (267)
Q Consensus 158 ~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~iyGp 233 (267)
+..+..+++.+ ..++ ++||+||. ||.+. .| ..+|+++..++ ++|+|++++|||
T Consensus 79 Nv~Gt~nLleAA~~~Gv-RiV~~SS~--~G~~~----------------~~----~~aE~ll~~~~~p~~ILR~~nVYGp 135 (699)
T PRK12320 79 GITGLAHVANAAARAGA-RLLFVSQA--AGRPE----------------LY----RQAETLVSTGWAPSLVIRIAPPVGR 135 (699)
T ss_pred HHHHHHHHHHHHHHcCC-eEEEEECC--CCCCc----------------cc----cHHHHHHHhcCCCEEEEeCceecCC
Confidence 44556666532 3455 79999975 44210 01 14688777764 999999999999
Q ss_pred C
Q 024494 234 L 234 (267)
Q Consensus 234 ~ 234 (267)
+
T Consensus 136 ~ 136 (699)
T PRK12320 136 Q 136 (699)
T ss_pred C
Confidence 7
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.6e-12 Score=133.75 Aligned_cols=149 Identities=15% Similarity=0.147 Sum_probs=99.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC----CeEEEEeCCCCCchhhhc----------------cCee---eecCCc--
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELIN----------------MGIT---PSLKWT-- 137 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG----~~V~~l~R~~~~~~~l~~----------------~~v~---~d~~d~-- 137 (267)
.++|||||+ ||||++|+++|+++ + ++|+++.|.......... ..+. .|+.++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~--~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTR--RSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhc--CCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence 378999996 99999999999988 5 899999997543321110 0122 233222
Q ss_pred --------cccCCCCEEEEccCCCCCCC--------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCC-----------
Q 024494 138 --------EATQKFPYVIFCAPPSRSLD--------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD----------- 188 (267)
Q Consensus 138 --------~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~----------- 188 (267)
+...++|+|||+|+...... ++.++.+++. ...++++|+|+||.++|+...
T Consensus 1049 gl~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~ 1128 (1389)
T TIGR03443 1049 GLSDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQA 1128 (1389)
T ss_pred CcCHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhc
Confidence 12357999999999754321 3344555543 224678999999999997421
Q ss_pred -CCccCCCCCCCCC---CCCHHHHHHHHHHHHHHHc---C--eeEEeeCccccCC
Q 024494 189 -NGACDEDSPVVPI---GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 189 -~~~~~E~~p~~p~---~~~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp~ 234 (267)
...+.|+.+..+. ..+.|+.+|..+|+++..+ + ++|+||+.+||++
T Consensus 1129 ~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443 1129 GGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred cCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCC
Confidence 1123444322211 1257999999999998764 3 8999999999986
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.5e-11 Score=116.94 Aligned_cols=150 Identities=18% Similarity=0.161 Sum_probs=108.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhh----hc----cCee---eecCCc----cccCC--CCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN----MGIT---PSLKWT----EATQK--FPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l----~~----~~v~---~d~~d~----~~~~~--~D~ 145 (267)
++|||||+ |-||+.+++++++. +. +++.++|++.+.... .. ..+. .|+.|. .++.+ +|+
T Consensus 251 K~vLVTGagGSiGsel~~qil~~--~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~ 328 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKF--NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI 328 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhc--CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence 78999997 99999999999998 54 788999987654332 21 1122 345554 24555 999
Q ss_pred EEEccCCCCCCC-----------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHH
Q 024494 146 VIFCAPPSRSLD-----------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 146 Vi~~a~~~~~~~-----------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~ 212 (267)
|||+|+..+.+- ++-++.|++.+ .+++++||.+||- ...+|. +.||.+|+.
T Consensus 329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTD--------------KAV~Pt--NvmGaTKr~ 392 (588)
T COG1086 329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTD--------------KAVNPT--NVMGATKRL 392 (588)
T ss_pred EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecC--------------cccCCc--hHhhHHHHH
Confidence 999999765431 33445566543 3589999999983 334564 689999999
Q ss_pred HHHHHHHcC---------eeEEeeCccccCCc----hHHHHHh-CCcceecCCC
Q 024494 213 AEKVILEFG---------GCVLRLAGLYISLC----YLVEKFQ-GLPLLLKSPG 252 (267)
Q Consensus 213 aE~~l~~~~---------~~IlR~~~iyGp~~----~~l~~~~-g~~v~~~~~~ 252 (267)
+|..++.++ .+++|+|++.|... .|-+.++ |+|+.+..+.
T Consensus 393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTdp~ 446 (588)
T COG1086 393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTDPD 446 (588)
T ss_pred HHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccCCC
Confidence 999988752 68999999999984 4446674 9998876554
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=8.7e-11 Score=104.65 Aligned_cols=136 Identities=15% Similarity=0.037 Sum_probs=90.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~ 145 (267)
++++||||+ |+||++++++|+++ |++|++++|+++....+.. .. +..|+.|.+ ...++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLAR--GDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 478999996 99999999999999 9999999998765544322 12 234555541 2356899
Q ss_pred EEEccCCCCCCC--------h-------HHHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------Y-------PGDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~-------~~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+++...... + ..+..+++. ...+.+++|++||.+.+.. .| + .+
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---------~~--~--~~ 146 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA---------YP--G--FS 146 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC---------CC--C--Cc
Confidence 999998653211 1 111222221 2235689999999654321 11 1 35
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCcc---ccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGL---YISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~i---yGp~ 234 (267)
.|+.+|...|.+++.+ + ++++||+.+ ||++
T Consensus 147 ~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 147 LYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 7999999998766532 3 789999987 7654
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.1e-10 Score=104.26 Aligned_cols=135 Identities=10% Similarity=-0.002 Sum_probs=90.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc------CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM------GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~------~v~~d~~d~~-----------~~~~~D~ 145 (267)
+++|||||+ |.||++++++|+++ |++|++++|++++...+... .+..|+.|++ ...++|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAA--GHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhC--cCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 367999996 99999999999999 99999999987665443321 1234555541 2246899
Q ss_pred EEEccCCCCCCC--------hH-------HHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YP-------GDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~-------~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+...... +. .+..++.. ...+.+++|++||.+.+...+ + ..
T Consensus 82 vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~-----------~--~~ 148 (277)
T PRK06180 82 LVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMP-----------G--IG 148 (277)
T ss_pred EEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCC-----------C--cc
Confidence 999999643211 11 11112211 123467999999987654211 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.|+.+|...|.+++.+ + ++++||+.++++
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~ 186 (277)
T PRK06180 149 YYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTD 186 (277)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccC
Confidence 7899999888765442 3 799999999765
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=99.56 Aligned_cols=137 Identities=13% Similarity=0.065 Sum_probs=89.4
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhh----hc--cC---eeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DEL----IN--MG---ITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l----~~--~~---v~~d~~d~~-----------~~ 140 (267)
+|++|||+|+ |.||++|+++|+++ |++|++++|+.... +.+ .. .. +.+|+.|++ ..
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARA--GADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence 4578999996 99999999999999 99998888765432 111 11 11 234554431 12
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.++|+|||+++...... +.+ ...++. ....+++++|++||...|....
T Consensus 83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~----------- 151 (249)
T PRK12825 83 GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWP----------- 151 (249)
T ss_pred CCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCC-----------
Confidence 57899999998543211 111 111111 1234678999999988774321
Q ss_pred CCCCCHHHHHHHHHHHHHHH-------cC--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILE-------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~-------~~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|...|..+.. .+ ++++||+.++|+.
T Consensus 152 ~--~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (249)
T PRK12825 152 G--RSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDM 193 (249)
T ss_pred C--chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCc
Confidence 1 24688888877766543 23 8999999999997
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.8e-10 Score=95.60 Aligned_cols=144 Identities=13% Similarity=0.079 Sum_probs=99.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-CeeeecCCc----cccCCCCEEEEccCCCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWT----EATQKFPYVIFCAPPSRSLD- 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~d~~d~----~~~~~~D~Vi~~a~~~~~~~- 157 (267)
|||.|+|+ |.+|+++++++.++ ||+|++++|++.+....... -.+.|+.|+ +.+.+.|+||...+....+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~R--GHeVTAivRn~~K~~~~~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKR--GHEVTAIVRNASKLAARQGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhC--CCeeEEEEeChHhccccccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 78999997 99999999999999 99999999999887654211 123455554 35789999999887653322
Q ss_pred --hHHHHHHHH--HHhCCCCcEEEEcCCcc-ccCCCCCccCCCCCCCCCCCCHHHHHHHHHH--HHHHHcC---eeEEee
Q 024494 158 --YPGDVRLAA--LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIGRSPRTDVLLKAE--KVILEFG---GCVLRL 227 (267)
Q Consensus 158 --~~~~~~~l~--~~~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE--~~l~~~~---~~IlR~ 227 (267)
+....+.++ ++.+++.|++.++..+- |-+..... .|+|.-|. ..|...+..+| +.|+.-. ||.+-|
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rL--vD~p~fP~--ey~~~A~~~ae~L~~Lr~~~~l~WTfvSP 154 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRL--VDTPDFPA--EYKPEALAQAEFLDSLRAEKSLDWTFVSP 154 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCcee--ecCCCCch--hHHHHHHHHHHHHHHHhhccCcceEEeCc
Confidence 333333333 34568999999877653 32222122 24455553 24667788888 4565543 999999
Q ss_pred CccccCC
Q 024494 228 AGLYISL 234 (267)
Q Consensus 228 ~~iyGp~ 234 (267)
+.++-|+
T Consensus 155 aa~f~PG 161 (211)
T COG2910 155 AAFFEPG 161 (211)
T ss_pred HHhcCCc
Confidence 9999997
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.20 E-value=2e-10 Score=100.44 Aligned_cols=136 Identities=10% Similarity=0.045 Sum_probs=89.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cC---eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MG---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~---v~~d~~d~~-----------~~~~ 142 (267)
++++||+|+ |+||++|+++|+++ |++|++++|+++....+.. .. +..|+.|++ .+.+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAA--GANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999996 99999999999999 9999999998765433221 11 233555431 2456
Q ss_pred CCEEEEccCCCCCC-----C---hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL-----D---YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~-----~---~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++..... + +.. +...++ . ...+++++|++||...+...+ .
T Consensus 79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~---------~--- 146 (255)
T TIGR01963 79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASP---------F--- 146 (255)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCC---------C---
Confidence 89999999854321 1 111 111111 1 224578999999987654321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + ++++||+.++++.
T Consensus 147 -~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 147 -KSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred -CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 235778888777665432 3 7889999999986
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.9e-10 Score=98.22 Aligned_cols=137 Identities=12% Similarity=0.067 Sum_probs=90.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC--e---eeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--I---TPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~--v---~~d~~d~~-----------~~~~ 142 (267)
.++|||+|+ |+||++++++|+++ |++|++++|++++.... ...+ + ..|+.|++ ....
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAAD--GAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 478999996 99999999999999 99999999986543222 1111 2 23454431 2247
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++...... +. .....+.. ...+.++||++||...++.. ...
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~----------~~~- 152 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG----------YPG- 152 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC----------CCC-
Confidence 999999998644211 11 11111111 12356899999998776211 111
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + ++++||+.++|+.
T Consensus 153 -~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~ 193 (251)
T PRK12826 153 -LAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPM 193 (251)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcch
Confidence 246889998888766543 3 7899999999996
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.9e-10 Score=99.09 Aligned_cols=136 Identities=11% Similarity=0.103 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++++||||+ |+||++++++|+++ |++|++++|+++...+.. ..+ +..|+.|.+ ....
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARA--GAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 99999999999999 999999999875443221 112 234555531 1245
Q ss_pred CCEEEEccCCCCCCC--------hH-------HH----HHHHHH---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GD----VRLAAL---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~----~~~l~~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++...... +. .+ ++.++. ...+.+++|++||...+... + +
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~---------~--~ 153 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEAS---------P--L 153 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCC---------C--C
Confidence 899999998643211 11 11 111211 22357899999996544211 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + ++++||+.++++.
T Consensus 154 --~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~ 194 (262)
T PRK13394 154 --KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPL 194 (262)
T ss_pred --CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchh
Confidence 236888888887765543 2 7899999999986
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.6e-10 Score=97.75 Aligned_cols=135 Identities=12% Similarity=0.068 Sum_probs=88.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~~ 143 (267)
++|||+|+ |+||++++++|+++ |++|++++|++++...+.. . .+.+|+.|++ ...++
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKE--GAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999995 99999999999999 9999999998765433211 1 1334555531 23478
Q ss_pred CEEEEccCCCCCCC--------hH-------HH----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YP-------GD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~-------~~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|+|||+++...... +. .+ ++.++ +...+.++||++||...+.... .
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~-----------~-- 149 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSA-----------G-- 149 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCC-----------C--
Confidence 99999998543211 11 11 11121 1223678999999986553211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 150 ~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~ 190 (258)
T PRK12429 150 KAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPL 190 (258)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchh
Confidence 245777787777555432 3 7889999999986
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.15 E-value=7.9e-10 Score=95.74 Aligned_cols=137 Identities=12% Similarity=0.051 Sum_probs=88.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++|||+|+ |+||++++++|.++ |++|++++|++++...+. ..+ +.+|+.|++ ....
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAAD--GAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA 82 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 368999996 99999999999999 999999999876543221 111 124555531 2346
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++...... +. ....+++ . ...+++++|++||...+... .+
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~-----------~~- 150 (246)
T PRK05653 83 LDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGN-----------PG- 150 (246)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCC-----------CC-
Confidence 799999998643211 11 1111111 1 23456899999987543211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCCc
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISLC 235 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~~ 235 (267)
...|+.+|...|..++.+ + ++++||+.++++..
T Consensus 151 -~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~ 192 (246)
T PRK05653 151 -QTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMT 192 (246)
T ss_pred -CcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcch
Confidence 236778887766654432 3 78999999999874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=6.7e-10 Score=97.06 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cCeeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~v~~d~~d~~-----------~~~~~ 143 (267)
.++++|+|+ |.||++|+++|+++ |++|+++.|+.+....... ..+..|+.|++ ...++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFARE--GARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 368999996 99999999999999 9999999998654432211 11234555541 13579
Q ss_pred CEEEEccCCCCCCC--------hH-------HHH----HHHH--HHhCCCCcEEEEcCCccc-cCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YP-------GDV----RLAA--LSWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~-------~~~----~~l~--~~~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++...... +. ... +.++ ....+.+++|++||...+ +.. .
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------------~- 149 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGR------------G- 149 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCC------------C-
Confidence 99999999643211 11 111 1111 122356799999997543 321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 150 -~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (252)
T PRK06138 150 -RAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPY 190 (252)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcc
Confidence 246889998888776543 3 7889999999886
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.3e-10 Score=97.46 Aligned_cols=132 Identities=17% Similarity=0.144 Sum_probs=95.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec---CCc----cccCCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWT----EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~---~d~----~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+|||+|+ |++|++++++|+++ |++|.+.+|++++...+. .++++.. .++ ..+.+.|.++++.+.....
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~--~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~ 77 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLAR--GHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGS 77 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhC--CCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccc
Confidence 57999996 99999999999999 999999999998877666 5666544 343 3678999999998854311
Q ss_pred --ChH---HHHHHHHHHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeC
Q 024494 157 --DYP---GDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (267)
Q Consensus 157 --~~~---~~~~~l~~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~ 228 (267)
... ....+..++. .++++++++|..+.... .+ ..|.+.|...|+.+.+.+ ++++|+.
T Consensus 78 ~~~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~------------~~---~~~~~~~~~~e~~l~~sg~~~t~lr~~ 142 (275)
T COG0702 78 DAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAA------------SP---SALARAKAAVEAALRSSGIPYTTLRRA 142 (275)
T ss_pred cchhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCC------------Cc---cHHHHHHHHHHHHHHhcCCCeEEEecC
Confidence 111 1122222222 25788999887554221 12 468899999999999998 8999977
Q ss_pred ccccCC
Q 024494 229 GLYISL 234 (267)
Q Consensus 229 ~iyGp~ 234 (267)
.+|...
T Consensus 143 ~~~~~~ 148 (275)
T COG0702 143 AFYLGA 148 (275)
T ss_pred eeeecc
Confidence 777655
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.1e-09 Score=97.19 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=90.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
++|+|||+ |.||++++++|.++ |++|++++|+++....... ..+..|+.|++ ....+|+|||+++
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag 82 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARA--GYRVFGTSRNPARAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAG 82 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCChhhccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 57999996 99999999999999 9999999998655432221 12455666641 2356899999999
Q ss_pred CCCCC---C-----hH-------HHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSL---D-----YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~---~-----~~-------~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
..... + +. .+...+. +...+.+++|++||...+... |. ...|+.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~----~~~Y~~sK 149 (270)
T PRK06179 83 VGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPA---------PY----MALYAASK 149 (270)
T ss_pred CCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCC---------CC----ccHHHHHH
Confidence 65321 1 11 1111111 122467899999997655321 11 24689999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|.+.+.. + ++++||+.+.++.
T Consensus 150 ~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~ 182 (270)
T PRK06179 150 HAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182 (270)
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEeCCCccccc
Confidence 9888765542 3 8999999987763
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.9e-10 Score=98.93 Aligned_cols=134 Identities=10% Similarity=0.116 Sum_probs=87.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c----C---eeeecCCcc----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----G---ITPSLKWTE----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~----~---v~~d~~d~~----------~~~~ 142 (267)
+++||||+ |+||+++++.|+++ |++|++++|+++....+.. . . +.+|+.|++ ...+
T Consensus 4 k~~lItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKK--GYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence 56899996 99999999999999 9999999998765433211 1 1 234555542 1246
Q ss_pred CCEEEEccCCCCCC---C-----hH-------HHHHHHH------HHhCCCCcEEEEcCCcc-ccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YP-------GDVRLAA------LSWNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~-------~~~~~l~------~~~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++..... + +. .+...++ +...+.+++|++||... ++.. +
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~ 149 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFP------------G 149 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCC------------C
Confidence 89999999864321 1 11 1111111 12235679999998644 3321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + ++++||+.++.+.
T Consensus 150 --~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 150 --LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred --CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 246888998888766542 3 8999999888773
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=9.9e-10 Score=96.64 Aligned_cols=136 Identities=13% Similarity=0.078 Sum_probs=88.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c---CeeeecCCcc-----------ccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---GITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~---~v~~d~~d~~-----------~~~~~D 144 (267)
.+++||+|+ |.||++++++|+++ |++|++++|+++..+.+.. . .+..|+.|++ ...++|
T Consensus 11 ~~~vlItGa~g~iG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIAEAFAEA--GARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 378999996 99999999999999 9999999998765443321 1 1334555542 235799
Q ss_pred EEEEccCCC-CCCC--------hH-------HHHHHHH---H---HhCCC-CcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 145 YVIFCAPPS-RSLD--------YP-------GDVRLAA---L---SWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 145 ~Vi~~a~~~-~~~~--------~~-------~~~~~l~---~---~~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|||+++.. .... +. .....+. . ...+. ++++++||...+... + .
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~---------~--~- 156 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGY---------P--G- 156 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCC---------C--C-
Confidence 999999865 2111 11 1111111 1 12234 668888875432111 1 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.. + ++++||+.++|+.
T Consensus 157 -~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~ 197 (264)
T PRK12829 157 -RTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPR 197 (264)
T ss_pred -CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChH
Confidence 235889998888776553 3 8999999999997
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.6e-09 Score=96.93 Aligned_cols=135 Identities=13% Similarity=0.114 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCcc-------c-----cCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWTE-------A-----TQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~~-------~-----~~~~D~Vi 147 (267)
+++|+|||+ |.||++++++|.++ |++|++++|+++....+...++ ..|+.|.+ . ....|+||
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~--G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSD--GWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 467999996 99999999999999 9999999999876655544333 34555531 1 13689999
Q ss_pred EccCCCCCCC--------h-------HHH----HHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 148 FCAPPSRSLD--------Y-------PGD----VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 148 ~~a~~~~~~~--------~-------~~~----~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
|+|+...... + ..+ ++.++. ...+.+++|++||...+.. ..+ ...|
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-----------~~~--~~~Y 148 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-----------MKY--RGAY 148 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC-----------CCc--cchH
Confidence 9998643211 0 111 112211 2235689999999654421 111 2479
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+.+|.+.|.+.+.. + +++++|+.+-.+
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 99999999876542 3 789999988654
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1e-09 Score=96.29 Aligned_cols=134 Identities=18% Similarity=0.108 Sum_probs=86.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--C---eeeecCCcc----cc-CCCCEEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G---ITPSLKWTE----AT-QKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--~---v~~d~~d~~----~~-~~~D~Vi 147 (267)
|+++|||||+ |.||++++++|+++ |++|++++|++.....+.. . + +..|+.|++ .. .++|+||
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi 78 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLARK--GHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLL 78 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence 3468999996 99999999999999 9999999998654433211 1 1 234565542 22 3899999
Q ss_pred EccCCCCCCC--------hHH-------H----HHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 148 FCAPPSRSLD--------YPG-------D----VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 148 ~~a~~~~~~~--------~~~-------~----~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
|+++...... +.. + .+.++. ...+.+++|++||...+... |. ...|
T Consensus 79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~---------~~----~~~Y 145 (257)
T PRK09291 79 NNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG---------PF----TGAY 145 (257)
T ss_pred ECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC---------CC----cchh
Confidence 9998643211 110 1 111111 22356899999997543211 11 2468
Q ss_pred HHHHHHHHHHHHH-------cC--eeEEeeCccc
Q 024494 207 TDVLLKAEKVILE-------FG--GCVLRLAGLY 231 (267)
Q Consensus 207 ~~~k~~aE~~l~~-------~~--~~IlR~~~iy 231 (267)
+.+|...|.+.+. .+ ++++||+.+.
T Consensus 146 ~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 146 CASKHALEAIAEAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 8999888876443 24 8999998764
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-09 Score=95.63 Aligned_cols=136 Identities=12% Similarity=0.066 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--C---eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--~---v~~d~~d~~-----------~~~~ 142 (267)
++++||+|+ |+||++++++|+++ |++|++++|+.+....+.. . . +..|+.|.+ ...+
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEE--GAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 99999999999999 9999999998755433211 1 1 234554431 2346
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++...... +. .....++ . ...+.+++|++||.+.|.... .
T Consensus 81 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~---------~--- 148 (250)
T TIGR03206 81 VDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSS---------G--- 148 (250)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCC---------C---
Confidence 899999998542211 11 1111111 1 123567999999988875421 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 149 -~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 149 -EAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred -CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 236888998777665543 3 8999999999884
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.4e-09 Score=99.32 Aligned_cols=147 Identities=13% Similarity=0.057 Sum_probs=92.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCeeeecCCcc-----------ccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~~d~~d~~-----------~~~~~D~V 146 (267)
.++|+|||+ |.||++++++|+++ |++|++++|++++..+... ..+..|+.|.+ ...++|+|
T Consensus 26 ~k~vlITGasggIG~~~a~~L~~~--G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 26 GKTAIVTGGYSGLGLETTRALAQA--GAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 368999996 99999999999999 9999999998765443221 12344665541 23579999
Q ss_pred EEccCCCCC------CChHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCC-CccCCCCCCCCCCCCHH
Q 024494 147 IFCAPPSRS------LDYPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPR 206 (267)
Q Consensus 147 i~~a~~~~~------~~~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~-~~~~E~~p~~p~~~~~y 206 (267)
||+|+.... +++.. + ++.++ +...+.+++|++||.+.+..... ...++..+..+ ...|
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~--~~~Y 181 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDK--WLAY 181 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCCh--HHHH
Confidence 999985421 11111 1 11111 12234579999999765422110 00111112222 3579
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 182 ~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 182 GQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 99999988765432 3 7899999999884
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.4e-09 Score=97.08 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc------CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM------GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~------~v~~d~~d~~-----------~~~~~D~ 145 (267)
+++|||+|+ |.||++++++|.++ |++|++++|+++....+... .+..|+.|++ ...++|+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALER--GDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367999996 99999999999999 99999999987654433211 1244555531 2357899
Q ss_pred EEEccCCCCCCC--------hH-------HHH----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YP-------GDV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~-------~~~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+++...... +. ... +.++ +...+.+++|++||...+.... . ..
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~--~~ 147 (275)
T PRK08263 81 VVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFP-----------M--SG 147 (275)
T ss_pred EEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCC-----------C--cc
Confidence 999999653211 11 111 1111 1223567999999987765321 1 24
Q ss_pred HHHHHHHHHHHHHHH-------cC--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILE-------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~-------~~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...|.+.+. .+ ++++||+.+..+.
T Consensus 148 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~ 186 (275)
T PRK08263 148 IYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDW 186 (275)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCc
Confidence 699999988766543 23 8999998876543
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.1e-09 Score=95.92 Aligned_cols=145 Identities=14% Similarity=0.180 Sum_probs=91.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c----cC---eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----MG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~----~~---v~~d~~d~~-----------~~~ 141 (267)
+++||+|+ |.||+++++.|.++ |++|++++|++++.+.+. . .. +.+|+.|++ ...
T Consensus 5 k~vlItGas~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 5 KTILITGAGGLIGSALVKAILEA--GGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 78999996 99999999999999 999999999876543221 1 11 245666541 123
Q ss_pred CCCEEEEccCCCCC------CC-----hHHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 142 KFPYVIFCAPPSRS------LD-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~------~~-----~~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.+|+|||+|+.... .+ +... ++.++ +...+.+++|++||...+.... .+..|+.+
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-~~~~~~~~ 161 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPK-FEIYEGTS 161 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhcccc-chhccccc
Confidence 58999999964311 00 1111 11111 1223567999999976554322 12223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
... ...|+.+|...|.+.+.. + +++++|+.++.+.
T Consensus 162 ~~~--~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 162 MTS--PVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred cCC--cchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 322 136899998888776432 2 7899999998775
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.4e-09 Score=94.01 Aligned_cols=132 Identities=13% Similarity=0.092 Sum_probs=89.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----------ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----------ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----------~~~~~D~Vi~~a~~~ 153 (267)
+++||+|+ |.||++++++|.++ |++|++++|+++.. ....-+..|+.|.+ ...++|+|||+++..
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~--G~~v~~~~r~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~ 79 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANL--GHQVIGIARSAIDD--FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIA 79 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCcccc--cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCC
Confidence 68999996 99999999999999 99999999986542 11122445665541 112689999999864
Q ss_pred CCCC--------hHH-------HHHH----HH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHH
Q 024494 154 RSLD--------YPG-------DVRL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 154 ~~~~--------~~~-------~~~~----l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~ 212 (267)
.... +.+ +... +. +...+.+++|++||.++|+... ...|+.+|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~--------------~~~Y~~sK~a 145 (234)
T PRK07577 80 LPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGALD--------------RTSYSAAKSA 145 (234)
T ss_pred CCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCCC--------------chHHHHHHHH
Confidence 3211 111 1111 11 1223568999999998775321 2468899988
Q ss_pred HHHHHHHc-------C--eeEEeeCccccCC
Q 024494 213 AEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 213 aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|.+.+.+ + ++++||+.+..+.
T Consensus 146 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 146 LVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred HHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 88766542 3 7899999998775
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-09 Score=93.43 Aligned_cols=136 Identities=13% Similarity=0.016 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhccC---eeeecCCcc-----------ccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG---ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~~~---v~~d~~d~~-----------~~~~~D 144 (267)
.++|||+|+ |.||++++++|+++ |++|++++|++++..+ +...+ +..|+.|.+ ...++|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAAR--GARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHC--CCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 378999996 99999999999999 9999999998765322 21122 234555431 234789
Q ss_pred EEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|||+++...... +.+ ....++ . ...+++++|++||...|+... + .
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~--~ 151 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGP-----------G--M 151 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCC-----------C--c
Confidence 9999998542110 111 111111 1 224678999999998875421 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|...|.+++.. + +.++||+.++++.
T Consensus 152 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 152 GAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 36888887776665432 3 7889999999884
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-09 Score=94.72 Aligned_cols=135 Identities=11% Similarity=0.049 Sum_probs=84.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhh----c---cC---eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI----N---MG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~----~---~~---v~~d~~d~~-----------~~~ 141 (267)
++|||+|+ |+||++++++|+++ |++|++++|+... .+.+. . .. +..|+.|.+ .+.
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAA--GYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 67999996 99999999999999 9999999986432 22111 1 11 233555431 234
Q ss_pred CCCEEEEccCCCCCCC---------------hHHHHHHHHHHh-----CCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD---------------YPGDVRLAALSW-----NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~---------------~~~~~~~l~~~~-----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
++|+|||+++...... +..+..+++.+. .....++.+++ +++ +.|..+
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~- 152 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD--IHA---------ERPLKG- 152 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC--hhh---------cCCCCC-
Confidence 6899999998532111 111112222111 11234555544 222 233334
Q ss_pred CCCHHHHHHHHHHHHHHHc------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|..+|.+++.+ + ++++||+.++||.
T Consensus 153 -~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~ 192 (249)
T PRK09135 153 -YPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPE 192 (249)
T ss_pred -chhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCcc
Confidence 358999999999887653 2 7899999999997
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.11 E-value=8.3e-10 Score=96.22 Aligned_cols=135 Identities=22% Similarity=0.220 Sum_probs=90.3
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhccCeee---ecCCc----cccCCCCEEEEccCCCCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGITP---SLKWT----EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~~~v~~---d~~d~----~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+|+|+ |.+|+++++.|++. +++|.+++|++.+ ...+...|++. |..|+ ++++++|+||.+.+... +
T Consensus 1 I~V~GatG~~G~~v~~~L~~~--~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-~ 77 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSA--GFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSH-P 77 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHT--TGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC-C
T ss_pred CEEECCccHHHHHHHHHHHhC--CCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcch-h
Confidence 789996 99999999999998 9999999998743 34455566554 44444 47899999998888654 2
Q ss_pred ChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCcccc
Q 024494 157 DYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYI 232 (267)
Q Consensus 157 ~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~iyG 232 (267)
...+...+++. ..+++++||+.|-...+. +.....|. .+.-..|...|+.+++.+ ++++|++..+.
T Consensus 78 ~~~~~~~~li~Aa~~agVk~~v~ss~~~~~~--------~~~~~~p~--~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~e 147 (233)
T PF05368_consen 78 SELEQQKNLIDAAKAAGVKHFVPSSFGADYD--------ESSGSEPE--IPHFDQKAEIEEYLRESGIPYTIIRPGFFME 147 (233)
T ss_dssp CHHHHHHHHHHHHHHHT-SEEEESEESSGTT--------TTTTSTTH--HHHHHHHHHHHHHHHHCTSEBEEEEE-EEHH
T ss_pred hhhhhhhhHHHhhhccccceEEEEEeccccc--------cccccccc--chhhhhhhhhhhhhhhccccceeccccchhh
Confidence 33334444443 234899999766444432 11111121 123357888899999988 99999998776
Q ss_pred CC
Q 024494 233 SL 234 (267)
Q Consensus 233 p~ 234 (267)
..
T Consensus 148 ~~ 149 (233)
T PF05368_consen 148 NL 149 (233)
T ss_dssp HH
T ss_pred hh
Confidence 54
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.6e-09 Score=95.48 Aligned_cols=134 Identities=19% Similarity=0.161 Sum_probs=87.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc---hhhhccC-----eeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELINMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~---~~l~~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
.+++||||+ |+||++++++|.++ |++|++++|++... .++...+ +..|+.|.+ ...++
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAE--GARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 478999996 99999999999999 99999999975321 1111111 334565531 23578
Q ss_pred CEEEEccCCCC---C-CC-----hHHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSR---S-LD-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~---~-~~-----~~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+... . .+ +... ++.++ +...+.+++|++||...|+..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------------- 151 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN-------------- 151 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC--------------
Confidence 99999997421 1 01 1111 11111 112356799999998876421
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.+++|.
T Consensus 152 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 152 -RVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred -CCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcc
Confidence 135889999888776543 3 7889999999974
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-09 Score=95.81 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCcc-----------ccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWTE-----------ATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~-----------~~~~~D~Vi~ 148 (267)
+++++|||+ |.||++++++|.++ |++|++++|++++..++...+ +..|+.|++ ...++|+|||
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQ--GYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 478999996 99999999999999 999999999877655443323 345666542 2347999999
Q ss_pred ccCCCCCCC--------h-------HHH----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSLD--------Y-------PGD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~~--------~-------~~~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+++...... + ..+ ++.++ +...+.+++|++||.+.+... |. ...|+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~------------~~-~~~Y~ 147 (273)
T PRK06182 81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT------------PL-GAWYH 147 (273)
T ss_pred CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC------------CC-ccHhH
Confidence 998653211 1 011 11111 122356799999996543211 11 23688
Q ss_pred HHHHHHHHHHHH-------cC--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILE-------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~-------~~--~~IlR~~~iyGp~ 234 (267)
.+|...|.+.+. .+ ++++||+.+..+.
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 183 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEW 183 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCccccc
Confidence 999988876432 23 8999999998774
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-09 Score=93.42 Aligned_cols=136 Identities=9% Similarity=0.054 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-------CeeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-------GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-------~v~~d~~d~~-----------~~~~~ 143 (267)
.+++||+|+ |.||++++++|+++ |++|++++|++++...+.. . .+..|+.|++ ....+
T Consensus 5 ~~~vlItGasg~iG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 5 GKVAIVTGASSGIGEGIARRFAAE--GARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 378999996 99999999999999 9999999999765443321 1 1234555431 23468
Q ss_pred CEEEEccCCCCCCC---------hHH-------H----HHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD---------YPG-------D----VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~---------~~~-------~----~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++...... +.+ + ++.++. ...+.++||++||...+.... +
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~- 150 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRP-----------G- 150 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCC-----------C-
Confidence 99999998632110 111 1 111111 123568999999988775321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + ++.+||+.+..+.
T Consensus 151 -~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~ 191 (251)
T PRK07231 151 -LGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGL 191 (251)
T ss_pred -chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCc
Confidence 246888888877665543 2 7889999887664
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.4e-09 Score=93.14 Aligned_cols=135 Identities=18% Similarity=0.175 Sum_probs=89.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC---eeeecCCcc-------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG---ITPSLKWTE-------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~---v~~d~~d~~-------~~~~~D~Vi~~a~~ 152 (267)
++++|+|+ |.||+++++.|+++ |++|++++|++++..++.. .+ +..|+.+.+ ...++|+|||+++.
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQR--GARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 78999996 99999999999999 9999999998765544322 12 234555431 23468999999986
Q ss_pred CCCCC--------hHH-------HHHHHH---HH---hCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 153 SRSLD--------YPG-------DVRLAA---LS---WNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 153 ~~~~~--------~~~-------~~~~l~---~~---~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
..... +.+ ....++ .. ..+ .++||++||...|.... + ...|+.+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~--~~~y~~sK 154 (245)
T PRK07060 88 ASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLP-----------D--HLAYCASK 154 (245)
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCC-----------C--CcHhHHHH
Confidence 43211 111 111111 11 112 47899999987664311 1 24699999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|.+++.+ + ++.+||+.++++.
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~ 187 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPM 187 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCch
Confidence 9998876543 3 7889999999885
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=3e-09 Score=92.49 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=87.4
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC----chhh----hcc--C---eeeecCCcc----------
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDEL----INM--G---ITPSLKWTE---------- 138 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~----~~~l----~~~--~---v~~d~~d~~---------- 138 (267)
++|+|+|+|+ |+||++++++|+++ |++|++++|.... ...+ ... . +..|+.|++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 82 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAAD--GADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGV 82 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 3478999996 99999999999999 9999998764321 1111 111 1 223454431
Q ss_pred -ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHH---H----HhCCCCcEEEEcCCccccCCCCCccCCC
Q 024494 139 -ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAA---L----SWNGEGSFLFTSSSAIYDCSDNGACDED 195 (267)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~----~~~~v~r~V~~SS~~VYg~~~~~~~~E~ 195 (267)
...++|+|||+++...... +. .....++ . ...+.+++|++||...|....
T Consensus 83 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------- 155 (249)
T PRK12827 83 EEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNR------- 155 (249)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCC-------
Confidence 1256899999998654211 11 1111111 1 123567899999987764311
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 156 ----~--~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~ 197 (249)
T PRK12827 156 ----G--QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPM 197 (249)
T ss_pred ----C--CchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCc
Confidence 1 246888998877665543 3 8999999999986
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-09 Score=93.58 Aligned_cols=133 Identities=13% Similarity=0.144 Sum_probs=88.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~ 142 (267)
.++++|+|+ |+||++++++|.++ |++|++++|+++....+.+ . .+..|+.|.+ ....
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 6 DKVAIVTGAAGGIGQAYAEALARE--GASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 378999996 99999999999999 9999999998654332211 1 1234555542 2346
Q ss_pred CCEEEEccCCCCC---C-----C---hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRS---L-----D---YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~---~-----~---~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+|+|||+++.... . . +.+ ...++. + ...+.+++|++||...|..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~------------ 151 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY------------ 151 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC------------
Confidence 8999999995321 0 1 111 111111 1 1224579999999888742
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|+.+|.+.|.+++.+ + +++++|+.+..+.
T Consensus 152 ----~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 192 (250)
T PRK07774 152 ----SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEA 192 (250)
T ss_pred ----ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcc
Confidence 135889999888876653 2 7889999888776
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2e-09 Score=94.80 Aligned_cols=134 Identities=11% Similarity=0.041 Sum_probs=87.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||+|+ |.||+++++.|+++ |++|+.++|+.+....+.. . .+..|+.|++ ....+|+|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAE--GARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67999996 99999999999999 9999999998765443321 1 1234555431 23578999
Q ss_pred EEccCCCCCC--------ChHH-------HHHHHHH---H---hC-CCCcEEEEcCCc-cccCCCCCccCCCCCCCCCCC
Q 024494 147 IFCAPPSRSL--------DYPG-------DVRLAAL---S---WN-GEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 147 i~~a~~~~~~--------~~~~-------~~~~l~~---~---~~-~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~~~ 203 (267)
||+++..... ++.. ....++. . .. ..+++|++||.. .++. + + .
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~--~--~ 150 (257)
T PRK07067 85 FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE----------A--L--V 150 (257)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC----------C--C--C
Confidence 9999854211 1111 1111111 1 11 235899999964 3331 1 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|...|.+.+.. + +.++||+.++++.
T Consensus 151 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 151 SHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred chhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 46889998888776532 3 7889999999985
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-09 Score=94.78 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=88.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cCeeeecCCcc-----------ccCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~v~~d~~d~~-----------~~~~ 142 (267)
|+++|||||+ |.||++++++|.++ |++|++++|+++...++.+ ..+..|+.|++ ....
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYARQ--GATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGL 78 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3578999996 99999999999999 9999999998765433321 11234555531 1245
Q ss_pred CCEEEEccCCCCCC------C---hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL------D---YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~------~---~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++..... + +.. +...+. +...+.+++|++||...+... |.
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~---------~~-- 147 (257)
T PRK07024 79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL---------PG-- 147 (257)
T ss_pred CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC---------CC--
Confidence 89999999854211 1 111 111111 122356789999987644211 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.|...+.. + ++++||+.+.++
T Consensus 148 --~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 187 (257)
T PRK07024 148 --AGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTP 187 (257)
T ss_pred --CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCc
Confidence 236899999998776442 3 888999998877
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=2e-09 Score=94.54 Aligned_cols=136 Identities=13% Similarity=0.072 Sum_probs=88.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~ 142 (267)
.++|||+|+ |.||++++++|+++ |++|++++|+++..+.+.. . .+..|+.|.+ ...+
T Consensus 5 ~k~vlItGa~~~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 5 GKVVVVSGVGPGLGRTLAVRAARA--GADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 9999999998755433221 1 1334555531 2357
Q ss_pred CCEEEEccCCCCC-C-----C---hHHHH-------HHHH---HHh--CCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRS-L-----D---YPGDV-------RLAA---LSW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-~-----~---~~~~~-------~~l~---~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++.... . + +...+ ..+. ... ...+++|++||...+... .+
T Consensus 83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~-----------~~- 150 (258)
T PRK07890 83 VDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ-----------PK- 150 (258)
T ss_pred ccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC-----------CC-
Confidence 8999999985321 1 1 11111 1111 111 123689999998664321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + +.++||+.++++.
T Consensus 151 -~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~ 191 (258)
T PRK07890 151 -YGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDP 191 (258)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHH
Confidence 246888998888776543 3 7889999999986
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.2e-09 Score=92.57 Aligned_cols=135 Identities=14% Similarity=0.087 Sum_probs=86.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC-----eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG-----ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~-----v~~d~~d~~-----------~~~~~D~ 145 (267)
.++++|+|+ |.||++++++|.++ |++|++++|+.+...++.+ .+ +..|+.|.+ ...++|+
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAE--GARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 368999996 99999999999999 9999999998654433221 11 233444431 2357899
Q ss_pred EEEccCCCCCCC--------hHH-------HHHHHHHHh----CCCCcEEEEcC-CccccCCCCCccCCCCCCCCCCCCH
Q 024494 146 VIFCAPPSRSLD--------YPG-------DVRLAALSW----NGEGSFLFTSS-SAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~~~l~~~~----~~v~r~V~~SS-~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
|||+++...... +.. ....+..+. ....++|++|| .+.|+.+ . ...
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~------------~--~~~ 149 (249)
T PRK06500 84 VFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMP------------N--SSV 149 (249)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCC------------C--ccH
Confidence 999998643211 111 111111111 12356777776 4455421 1 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.|.+++.+ + +.++||+.++++.
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 150 YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 999999999887432 3 7889999999873
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.6e-09 Score=92.76 Aligned_cols=136 Identities=14% Similarity=0.040 Sum_probs=86.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhcc-----CeeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM-----GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~-----~v~~d~~d~~-----------~~~ 141 (267)
++++||||+ |+||++++++|.++ |++|++++|+... ... +... -+..|+.|++ ...
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAA--GFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG 79 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 367999996 99999999999999 9999999986432 111 1111 1234555531 235
Q ss_pred CCCEEEEccCCCCC--C-------C-hH-------HHHHHHH-------HHhCC-----CCcEEEEcCCccccCCCCCcc
Q 024494 142 KFPYVIFCAPPSRS--L-------D-YP-------GDVRLAA-------LSWNG-----EGSFLFTSSSAIYDCSDNGAC 192 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~--~-------~-~~-------~~~~~l~-------~~~~~-----v~r~V~~SS~~VYg~~~~~~~ 192 (267)
.+|+|||+++.... . + +. .+...+. .+..+ ++++|++||...+....
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---- 155 (256)
T PRK12745 80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSP---- 155 (256)
T ss_pred CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCC----
Confidence 78999999985321 0 0 11 1111111 11111 56799999977653211
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 193 ~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 156 -------~--~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 197 (256)
T PRK12745 156 -------N--RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDM 197 (256)
T ss_pred -------C--CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcc
Confidence 1 235888998888776543 3 7889999999875
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=3.8e-09 Score=92.91 Aligned_cols=136 Identities=14% Similarity=0.102 Sum_probs=89.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.++|||+|+ |.||+.++++|+++ |++|++++|++++...+ ...+ +..|+.|.+ ....
T Consensus 10 ~k~vlItGa~g~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 10 GRRALVTGSSQGIGYALAEGLAQA--GAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCEEEEECCcchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 378999996 99999999999999 99999999987544322 1112 233555431 2356
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++...... +.+ ....+. . ...+.+++|++||...+... +
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------------~- 154 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALAR------------P- 154 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCC------------C-
Confidence 899999998643211 111 111111 1 12356799999997543211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+...|+.+|...|.+.+.+ + +.++||+.+.++.
T Consensus 155 ~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 155 GIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 1347899999888876543 3 7889999999885
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.5e-09 Score=92.24 Aligned_cols=135 Identities=10% Similarity=0.013 Sum_probs=88.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~V 146 (267)
|+|+|+|+ |.||.+++++|+++ |++|++++|++++.+.+.. .. +..|+.|.+ ...++|.|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67999996 99999999999999 9999999998765544321 12 234555531 23479999
Q ss_pred EEccCCCCC-----C-C---hHH-------H----HHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSRS-----L-D---YPG-------D----VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~~-----~-~---~~~-------~----~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
||+++.... . . +.+ + ++.++. ...+.+++|++||...+.. ..+ ..
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~--~~ 145 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP-----------YAG--GN 145 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC-----------CCC--Cc
Confidence 999985321 0 1 111 1 111111 2235679999999765421 111 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...|.+.+.. + +.+++|+.+.|+.
T Consensus 146 ~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~ 184 (248)
T PRK10538 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTE 184 (248)
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccc
Confidence 6899999888776543 2 6889999998664
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.1e-09 Score=91.83 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=89.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cC---eeeecCCcc-----------ccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~---v~~d~~d~~-----------~~~ 141 (267)
.|++++|+|+ |.||+.++++|+++ |++|++++|++++...+.. .. +..|+.|++ ...
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKA--GWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999996 99999999999999 9999999998765433321 11 234555431 234
Q ss_pred CCCEEEEccCCCCCC-----C---hH-------HH----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL-----D---YP-------GD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~---~~-------~~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+++..... + +. .. ++.++ +...+.+++|++||...|+... .
T Consensus 83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~ 151 (241)
T PRK07454 83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFP-----------Q 151 (241)
T ss_pred CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCC-----------C
Confidence 689999999864321 1 10 01 11111 1123457899999998875321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.. + ++++||+.+-.+.
T Consensus 152 --~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~ 192 (241)
T PRK07454 152 --WGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPL 192 (241)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCc
Confidence 246899998888765432 3 8899999986653
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.3e-09 Score=92.56 Aligned_cols=135 Identities=10% Similarity=0.093 Sum_probs=87.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC---eeeecCCcc-----------ccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG---ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~---v~~d~~d~~-----------~~~~~D 144 (267)
++++||+|+ |.||++++++|+++ |++|++++|++++.+.+.. .. +..|+.|++ ...++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAA--GDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467999996 99999999999999 9999999998765433321 12 234555542 124689
Q ss_pred EEEEccCCCCCCC--------hHH-------HHHHHH----H--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPG-------DVRLAA----L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-------~~~~l~----~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|||+++...... +.. ....++ . ...+.+++|++||...+... . .
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------~----~ 145 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL----------G----H 145 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC----------C----C
Confidence 9999998643211 111 111111 1 12346789999996543210 0 1
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.|..++.+ + +.++||+.++++.
T Consensus 146 ~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 185 (257)
T PRK07074 146 PAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA 185 (257)
T ss_pred cccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence 24788898888776654 2 6889999999885
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=7.1e-09 Score=92.31 Aligned_cols=135 Identities=13% Similarity=0.098 Sum_probs=87.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCcc-----------ccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWTE-----------ATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~-----------~~~~~D~Vi~ 148 (267)
|+++||||+ |.||++++++|.++ |++|++++|+++....+...+ +..|+.|.+ ...++|+|||
T Consensus 1 mk~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAA--GYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 578999996 99999999999999 999999999876554443333 334555531 2357899999
Q ss_pred ccCCCCCCC--------hHH-------HHHHHHH---H--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 149 CAPPSRSLD--------YPG-------DVRLAAL---S--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 149 ~a~~~~~~~--------~~~-------~~~~l~~---~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
+++...... +.. +...+.. . ..+.+++|++||...+... | . ...|+.
T Consensus 79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~~Y~~ 145 (274)
T PRK05693 79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT---------P--F--AGAYCA 145 (274)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC---------C--C--ccHHHH
Confidence 998643211 111 1111111 1 1234689999986543211 1 1 246889
Q ss_pred HHHHHHHHHHH-------cC--eeEEeeCccccC
Q 024494 209 VLLKAEKVILE-------FG--GCVLRLAGLYIS 233 (267)
Q Consensus 209 ~k~~aE~~l~~-------~~--~~IlR~~~iyGp 233 (267)
+|...|.+.+. .+ +++++|+.+..+
T Consensus 146 sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 146 SKAAVHALSDALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCccccc
Confidence 99887776443 23 788999998655
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.6e-09 Score=91.73 Aligned_cols=135 Identities=13% Similarity=0.079 Sum_probs=86.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEE-EeCCCCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~-l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++++|+|+ |.||++++++|+++ |++|+. ..|+.++.+++ ...+ +..|+.|++ ....
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEE--GYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999996 99999999999999 999876 46765443222 1111 234555541 2246
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++...... +. .....++ . ...+.++||++||...+... .+
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------~~- 150 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL-----------EN- 150 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-----------CC-
Confidence 899999998543211 11 1111111 1 12356799999997654321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + +++++|+.+..+.
T Consensus 151 -~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 151 -YTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 247999999999887653 2 7889999998765
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.5e-09 Score=92.13 Aligned_cols=134 Identities=14% Similarity=0.054 Sum_probs=87.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----C---eeeecCCcc--------c----cCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----G---ITPSLKWTE--------A----TQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~---v~~d~~d~~--------~----~~~~ 143 (267)
|+++||+|+ |.||++++++|+++ |++|++++|+++..+++... . +..|+.|.+ . ..++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAE--GWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRL 78 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999996 99999999999999 99999999987765444221 1 234555531 1 3468
Q ss_pred CEEEEccCCCCCCC--------hH-------HHHHHHH------HHhCCCCcEEEEcCCc-cccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YP-------GDVRLAA------LSWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~-------~~~~~l~------~~~~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+...... +. .....+. +...+..++|++||.. +||...
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~------------- 145 (260)
T PRK08267 79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPG------------- 145 (260)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCC-------------
Confidence 99999998653211 11 1111111 1123467899999864 444211
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|...|.+.+.. + +.+++|+.+-.+
T Consensus 146 -~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 146 -LAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred -chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCc
Confidence 236888998887665543 2 777899887644
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.1e-09 Score=90.60 Aligned_cols=136 Identities=12% Similarity=0.053 Sum_probs=88.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~ 142 (267)
.++|+|+|+ |.||++++++|.++ |++|++++|++++.+.+.. . .+..|+.+++ ....
T Consensus 9 ~k~ilItGasg~IG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 9 GKVALVTGASSGLGARFAQVLAQA--GAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 378999996 99999999999999 9999999998765543321 1 1234554431 2346
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH-------HHhC-------CCCcEEEEcCCccccCCCCCccC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA-------LSWN-------GEGSFLFTSSSAIYDCSDNGACD 193 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~-------~~~~-------~v~r~V~~SS~~VYg~~~~~~~~ 193 (267)
+|+|||+++...... +.. +...+. .+.. ..+++|++||...+...
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------ 160 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVL------ 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCC------
Confidence 899999998542211 110 011111 1111 13589999998765421
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ . ...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 161 ---~--~--~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 161 ---P--Q--IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred ---C--C--ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 1 1 247889998888776553 2 7889999999886
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.5e-09 Score=92.91 Aligned_cols=135 Identities=16% Similarity=0.097 Sum_probs=88.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c----C---eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----G---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~----~---v~~d~~d~~-----------~~~ 141 (267)
+++||+|+ |+||+++++.|.++ |++|++++|++++...... . . +..|+.|++ ...
T Consensus 8 k~vlItGasg~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAA--GAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 78999996 99999999999999 9999999998654332211 0 1 123555531 124
Q ss_pred CCCEEEEccCCCCC----C--C---hHH-------HHHHHHH---H---hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 142 KFPYVIFCAPPSRS----L--D---YPG-------DVRLAAL---S---WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~----~--~---~~~-------~~~~l~~---~---~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
++|+|||+++.... . + +.. ....++. . ..+.+++|++||...+... |
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------~-- 154 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH---------R-- 154 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC---------C--
Confidence 78999999985321 0 1 111 1111111 1 1234689999998876431 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|...|.+++.+ + ++++||+.+.++.
T Consensus 155 ~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~ 196 (276)
T PRK05875 155 W--FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDL 196 (276)
T ss_pred C--CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcc
Confidence 1 247999999999887653 2 7889999887664
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.8e-09 Score=91.99 Aligned_cols=135 Identities=13% Similarity=0.051 Sum_probs=85.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhh----hcc-----CeeeecCCccc----c---------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INM-----GITPSLKWTEA----T--------- 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l----~~~-----~v~~d~~d~~~----~--------- 140 (267)
++|+|+|+ |+||++++++|+++ |++|.++ .|+.++.... ... .+..|+.|++. +
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLAND--GALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 78999996 99999999999999 9999875 5655433211 111 13345655420 0
Q ss_pred ----CCCCEEEEccCCCCCCC--------hHHH-------HHHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 ----QKFPYVIFCAPPSRSLD--------YPGD-------VRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 ----~~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.++|+|||+++...... +... ..++. .. ....+++|++||..+|....
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~--------- 155 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFT--------- 155 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCC---------
Confidence 36899999998643211 1111 11111 11 12346899999988875321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +++++|+.++++-
T Consensus 156 --~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 156 --G--SIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred --C--CcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 1 246889999888765432 2 7889999999875
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.1e-09 Score=93.03 Aligned_cols=135 Identities=13% Similarity=0.134 Sum_probs=88.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC--e---eeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--I---TPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~--v---~~d~~d~~-----------~~~~ 142 (267)
++.++|+|+ |+||++++++|.++ |++|++++|+.+...++. ..+ + ..|+.|.+ ...+
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAA--GFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 368999996 99999999999999 999999999765433221 111 2 23555531 2347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++...... +.. ...++. . ...+.++||++||...|...+ .
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~- 155 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRP-----------H- 155 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----------C-
Confidence 899999998643211 111 111111 1 122456899999987775321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+++.+ + ++++||+.+..+
T Consensus 156 -~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~ 195 (274)
T PRK07775 156 -MGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTG 195 (274)
T ss_pred -cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCc
Confidence 246999999999877643 3 789999887544
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=1e-08 Score=90.25 Aligned_cols=136 Identities=10% Similarity=0.021 Sum_probs=87.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~~ 152 (267)
++|||+|+ |.||++++++|.++ |++|++++|++.......-..+..|+.|++ ...++|+|||+|+.
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 87 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEA--GARVVTTARSRPDDLPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGG 87 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHC--CCEEEEEeCChhhhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 78999996 99999999999999 999999999764321100012344555531 23578999999984
Q ss_pred CCC-----C-----ChHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 153 SRS-----L-----DYPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 153 ~~~-----~-----~~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
... . ++.. +...+. . ...+.+++|++||...+... +.....|+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~~~~~Y~~s 155 (260)
T PRK06523 88 SSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPL------------PESTTAYAAA 155 (260)
T ss_pred cccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCC------------CCCcchhHHH
Confidence 321 0 1111 111111 1 12345789999997765321 1013479999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|...|.+.+.+ + +.+++|+.+..+.
T Consensus 156 K~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 156 KAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 99888775543 2 7889999999886
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.1e-08 Score=88.88 Aligned_cols=133 Identities=13% Similarity=0.090 Sum_probs=88.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccC---eeeecCCcc-------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMG---ITPSLKWTE-------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~---v~~d~~d~~-------~~~~~D~Vi~~a~~ 152 (267)
++|+|+|+ |.||++++++|+++ |+ +|++++|++++..+ .... +..|+.|++ ....+|+|||+++.
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLAR--GAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 67999986 99999999999999 99 99999998765532 1112 334555541 23468999999987
Q ss_pred -CCCC----C----hHH-------HHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 153 -SRSL----D----YPG-------DVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 153 -~~~~----~----~~~-------~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
.... . +.+ ....+.. ...+.+++|++||...|.... + ...|+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~-----------~--~~~y~~sK 150 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFP-----------N--LGTYSASK 150 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCC-----------C--chHhHHHH
Confidence 2211 0 111 1111111 123567899999987764311 1 24799999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|.+.+.+ + ++++||+.+.++
T Consensus 151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 9998765542 3 788999999666
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.01 E-value=8.5e-09 Score=90.07 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=85.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhcc-----CeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~-----~v~~d~~d~~-----------~~~~ 142 (267)
+++||+|+ |+||++++++|+++ |++|++++|+... ... +... .+..|+.|++ ...+
T Consensus 7 k~vlItGasggiG~~l~~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGA--GAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHC--CCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 68999996 99999999999999 9999999997532 221 1111 1234555542 1246
Q ss_pred CCEEEEccCCCCCCC---------hHHHHHHHHH---Hh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 143 FPYVIFCAPPSRSLD---------YPGDVRLAAL---SW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~---------~~~~~~~l~~---~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
+|+|||+++...... +.....+++. .. ...+++|++||...+... ..+.. |. +..|+.+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----~~~~~---~~-~~~Y~~s 156 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIP----TVKTM---PE-YEPVARS 156 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCc----cccCC---cc-ccHHHHH
Confidence 899999997542110 2222223322 11 123589999996542111 01111 21 3579999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|.+.|.+++.+ + +++++|+.+-++
T Consensus 157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~ 189 (248)
T PRK07806 157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGT 189 (248)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEeCCccccCc
Confidence 99999987764 2 666777766554
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=6.9e-09 Score=94.88 Aligned_cols=147 Identities=12% Similarity=0.064 Sum_probs=87.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--C---eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--~---v~~d~~d~~-----------~~~~ 142 (267)
+++++|||+ |.||.+++++|+++ |++|++++|+.++...+.. . . +..|+.|.+ ....
T Consensus 6 ~k~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 6 KGTVIITGASSGVGLYAAKALAKR--GWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 477999996 99999999999999 9999999998665432211 0 1 234555531 1235
Q ss_pred CCEEEEccCCCCC-----C----ChHH-------HHHHHH---H---HhCC--CCcEEEEcCCccccCCCC----Cc--c
Q 024494 143 FPYVIFCAPPSRS-----L----DYPG-------DVRLAA---L---SWNG--EGSFLFTSSSAIYDCSDN----GA--C 192 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-----~----~~~~-------~~~~l~---~---~~~~--v~r~V~~SS~~VYg~~~~----~~--~ 192 (267)
+|+|||+|+.... . ++.. +...+. + ...+ .+|+|++||...|..... .+ .
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 8999999985321 1 0111 111111 1 1122 369999999876532100 00 0
Q ss_pred ------------------CCCCCCCCCCCCHHHHHHHHHHHHH----HHc----C--eeEEeeCccccCC
Q 024494 193 ------------------DEDSPVVPIGRSPRTDVLLKAEKVI----LEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 193 ------------------~E~~p~~p~~~~~y~~~k~~aE~~l----~~~----~--~~IlR~~~iyGp~ 234 (267)
.+..+..| ...|+.+|++.+... +++ + +..+||+.+++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKP--GKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred chhhhhcchhcccccccccCccCCCc--cchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 01122333 357999998775443 333 3 7889999998643
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.00 E-value=7.9e-09 Score=90.82 Aligned_cols=136 Identities=10% Similarity=0.063 Sum_probs=86.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||+|+ |.||+++++.|.++ |++|++++|+++....+. ..+ +..|+.|++ ...+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVED--GFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 367899996 99999999999999 999999999875543321 111 234565541 2357
Q ss_pred CCEEEEccCCCCCC---C-----hHHH-------H----HHHH--HHhC-CCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPGD-------V----RLAA--LSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~-------~----~~l~--~~~~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++..... + +... . +.+. +... ...++|++||...+...+ .
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~ 148 (256)
T PRK08643 80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNP-----------E 148 (256)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCC-----------C
Confidence 89999999864321 1 1110 0 0111 1111 236899999876432111 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.+..+.
T Consensus 149 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 149 --LAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChh
Confidence 246888998877665432 2 7889999998774
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=6.1e-09 Score=90.95 Aligned_cols=135 Identities=13% Similarity=0.081 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cC---eeeecCCcc--------ccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MG---ITPSLKWTE--------ATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~---v~~d~~d~~--------~~~~~D 144 (267)
||+++|+|+ |.||++++++|+++ |++|++++|++++.+...+ .. +.+|+.|++ ...++|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAA--GARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 578999996 99999999999999 9999999998765433211 01 234555541 223579
Q ss_pred EEEEccCCCCCC-----C---hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSL-----D---YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~-----~---~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|||+++..... + +.+ +...+. +...+.+++|++||..-.... +. .
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~~-~ 145 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGR------------AS-N 145 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCC------------CC-C
Confidence 999999853211 1 111 111111 112356889999986432110 11 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..|+.+|...+.+.+.. + +..++|+.++++
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 146 YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCh
Confidence 35888898877665543 3 788999999877
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=9.6e-09 Score=90.43 Aligned_cols=134 Identities=13% Similarity=0.179 Sum_probs=85.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c----c---CeeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----M---GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~----~---~v~~d~~d~~-----------~~~ 141 (267)
++|||+|+ |.||++++++|.++ |++|+.++|+......+. . . .+..|+.|.+ ...
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEE--GYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 67999996 99999999999999 999999999865443221 1 0 1233554431 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHHH--HhCC-CCcEEEEcCCc-cccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAAL--SWNG-EGSFLFTSSSA-IYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~~--~~~~-v~r~V~~SS~~-VYg~~~~~~~~E~~p~ 198 (267)
..|+|||+++...... +.... +.+.. ...+ ..++|++||.. .|+..
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~----------- 149 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSK----------- 149 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCC-----------
Confidence 7899999998543211 11111 11111 1123 36899998854 34321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.+.+++.+ + +.++||+.++++.
T Consensus 150 -~--~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~ 191 (259)
T PRK12384 150 -H--NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSP 191 (259)
T ss_pred -C--CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccch
Confidence 1 236888998877665442 3 7899999988765
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=7.1e-09 Score=89.01 Aligned_cols=134 Identities=15% Similarity=0.107 Sum_probs=83.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cC---eeeecCCcc----c---cCCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MG---ITPSLKWTE----A---TQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~---v~~d~~d~~----~---~~~~D~Vi~~a 150 (267)
||++||+|+ |+||++++++|+++ ++|++++|++++.+.+.. .+ +..|+.|.+ . ..++|+|||++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~---~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a 79 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT---HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNA 79 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh---CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 578999996 99999999999876 889999998765433321 12 344565542 1 23699999999
Q ss_pred CCCCCCC--------hHH-------H----HHHHHHH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 151 PPSRSLD--------YPG-------D----VRLAALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 151 ~~~~~~~--------~~~-------~----~~~l~~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
+...... +.. . .+.++.. ....+++|++||...++... + ...|+.+|
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~-----------~--~~~y~~~K 146 (227)
T PRK08219 80 GVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANP-----------G--WGSYAASK 146 (227)
T ss_pred CcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCC-----------C--CchHHHHH
Confidence 8643210 110 0 1111111 12357899999988765321 1 23688889
Q ss_pred HHHHHHHHHc--------CeeEEeeCccccC
Q 024494 211 LKAEKVILEF--------GGCVLRLAGLYIS 233 (267)
Q Consensus 211 ~~aE~~l~~~--------~~~IlR~~~iyGp 233 (267)
...|.+++.. .+..++|+.+.++
T Consensus 147 ~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~ 177 (227)
T PRK08219 147 FALRALADALREEEPGNVRVTSVHPGRTDTD 177 (227)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEecCCccch
Confidence 8888765543 1455566555443
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=7.2e-09 Score=91.43 Aligned_cols=135 Identities=14% Similarity=0.074 Sum_probs=87.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
|++|||+|+ |.||+++++.|+++ |++|++++|++.+.+.+. ..+ +..|+.|.+ ...+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~--g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARA--GAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999996 99999999999999 999999999865433221 111 233455431 2347
Q ss_pred CCEEEEccCCCCCCC---------hHHH-------HHHHHHH-----hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD---------YPGD-------VRLAALS-----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~---------~~~~-------~~~l~~~-----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++...... +... ..+++.. ..+.+++|++||...|.... +
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~- 146 (263)
T PRK06181 79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVP-----------T- 146 (263)
T ss_pred CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCC-----------C-
Confidence 899999998643221 1111 1111111 12457899999988775321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|...|.+.+.. + ++++||+.+..+
T Consensus 147 -~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~ 186 (263)
T PRK06181 147 -RSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATD 186 (263)
T ss_pred -ccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccC
Confidence 247999999888776542 2 788999988655
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=9.6e-09 Score=89.82 Aligned_cols=135 Identities=15% Similarity=0.054 Sum_probs=86.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----CeeeecCCcc--------ccCCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWTE--------ATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~v~~d~~d~~--------~~~~~D~Vi~~ 149 (267)
|++++|||+ |.||++++++|+++ |++|++++|++++..++... .+.+|+.|.+ .....|.++|+
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQ--GWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 578999996 99999999999999 99999999987665444321 2345665542 11246889998
Q ss_pred cCCCCC-C----C---hHH-------HHHHHHH---Hh-CCCCcEEEEcCCc-cccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 150 APPSRS-L----D---YPG-------DVRLAAL---SW-NGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 150 a~~~~~-~----~---~~~-------~~~~l~~---~~-~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
++.... + + +.+ +..+++. .. ...+++|++||.. .++. |. ...|+.+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~-~~~Y~as 144 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-------------PR-AEAYGAS 144 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC-------------CC-CchhhHH
Confidence 874321 1 1 111 1111211 11 1346789888854 3321 11 2468999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|...|.+.+.+ + ++++||+.++++.
T Consensus 145 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~ 178 (240)
T PRK06101 145 KAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPL 178 (240)
T ss_pred HHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCC
Confidence 99888775432 3 7889999999874
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-08 Score=89.41 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=87.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--C-----eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--~-----v~~d~~d~~-----------~~ 140 (267)
+++++|+|+ |.||++++++|.++ |++|++++|++++.+++.. . + +..|+.|++ ..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAK--GRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 478999996 99999999999999 9999999998765443321 0 1 233555431 24
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.++|+|||+++...... +.. ....+. ....+.+++|++||...+... | .
T Consensus 80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~-~ 149 (248)
T PRK08251 80 GGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGL---------P-G 149 (248)
T ss_pred CCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCC---------C-C
Confidence 57999999998643211 110 111111 112356789999996543211 1 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+ ...|+.+|.+.|.+.+.. + +++++|+.+.++
T Consensus 150 ~--~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~ 190 (248)
T PRK08251 150 V--KAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSE 190 (248)
T ss_pred C--cccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcch
Confidence 1 246899998887665432 2 788999998776
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.3e-08 Score=89.68 Aligned_cols=137 Identities=10% Similarity=0.028 Sum_probs=88.4
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--C---eeeecCCcc-----------ccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G---ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~---v~~d~~d~~-----------~~~~~D 144 (267)
..++++|||+ |.||++++++|.++ |++|+.++|++++...+.. . . +..|+.|.+ ....+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAE--GWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 3478999996 99999999999999 9999999987654433211 1 1 234555531 224689
Q ss_pred EEEEccCCCCCC-------C---hHH-------HHHHHHHH-----hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSL-------D---YPG-------DVRLAALS-----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 145 ~Vi~~a~~~~~~-------~---~~~-------~~~~l~~~-----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+|||+|+..... + +.. ....+..+ ....+++|++||...+.... .
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~------------~- 153 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEP------------D- 153 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCC------------C-
Confidence 999999864321 0 111 11111111 11246899999876553211 1
Q ss_pred CCHHHHHHHHHHHHHHHc----C----eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF----G----GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+.++.
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 154 TEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCc
Confidence 246999999998776653 2 6789999998864
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=5.9e-09 Score=90.66 Aligned_cols=137 Identities=15% Similarity=0.066 Sum_probs=83.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhh----hccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDEL----INMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~ 141 (267)
|+++||+|+ |+||++++++|+++ |++|+++ .|+++...+. ...+ +..|+.|++ ...
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQE--GYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDE 78 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 568999996 99999999999999 9999874 5655433222 1111 334555541 235
Q ss_pred CCCEEEEccCCCCCC----C-----hHH-------HHHH----HHH---Hh--CCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 142 KFPYVIFCAPPSRSL----D-----YPG-------DVRL----AAL---SW--NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~-----~~~-------~~~~----l~~---~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
..|+|||+++..... + +.. .... ++. .. ...++||++||...+...+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~-------- 150 (247)
T PRK09730 79 PLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP-------- 150 (247)
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC--------
Confidence 689999999854211 0 100 0000 110 11 1235799999976543211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. . ...|+.+|...|.+++.. + ++++||+.+|++.
T Consensus 151 -~-~--~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~ 193 (247)
T PRK09730 151 -G-E--YVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEM 193 (247)
T ss_pred -C-c--ccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcc
Confidence 0 0 124888888888765532 3 7899999999985
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-08 Score=93.96 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=88.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeee-------ecCCc-c--------ccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP-------SLKWT-E--------ATQKFP 144 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~-------d~~d~-~--------~~~~~D 144 (267)
.+++|||+|+ |.+|+.+++.|+++ |+.|.++.|+.++...+.. ....+ +...+ + .....+
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkr--gf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKR--GFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHC--CCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccce
Confidence 4578999997 99999999999999 9999999999877665532 11111 11110 1 112334
Q ss_pred EEEEccCCCCCC------C--hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC-CCHHHHHHHHH
Q 024494 145 YVIFCAPPSRSL------D--YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG-RSPRTDVLLKA 213 (267)
Q Consensus 145 ~Vi~~a~~~~~~------~--~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~-~~~y~~~k~~a 213 (267)
+++-|++-.... + -..++.+++.+ .+|++|+|++|+++.=.... +.+... ...+-.+|+.+
T Consensus 156 ~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~--------~~~~~~~~~~~~~~k~~~ 227 (411)
T KOG1203|consen 156 IVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQ--------PPNILLLNGLVLKAKLKA 227 (411)
T ss_pred eEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCC--------CchhhhhhhhhhHHHHhH
Confidence 555565532111 1 12355666543 46999999998765422111 111100 01233788999
Q ss_pred HHHHHHcC--eeEEeeCccccC
Q 024494 214 EKVILEFG--GCVLRLAGLYIS 233 (267)
Q Consensus 214 E~~l~~~~--~~IlR~~~iyGp 233 (267)
|+++.+.+ ++|+|++...-.
T Consensus 228 e~~~~~Sgl~ytiIR~g~~~~~ 249 (411)
T KOG1203|consen 228 EKFLQDSGLPYTIIRPGGLEQD 249 (411)
T ss_pred HHHHHhcCCCcEEEeccccccC
Confidence 99999988 999999987643
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.2e-09 Score=94.76 Aligned_cols=131 Identities=21% Similarity=0.171 Sum_probs=92.5
Q ss_pred CCCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--h--hhhccC------e---eeecCCcc------ccCC
Q 024494 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHH--D--ELINMG------I---TPSLKWTE------ATQK 142 (267)
Q Consensus 83 ~m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~--~l~~~~------v---~~d~~d~~------~~~~ 142 (267)
|++..|||| +|.-|..|++.|+++ |++|+++.|+.... . .|...+ + ..|+.|.. ...+
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLek--GY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~ 78 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEK--GYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQ 78 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhc--CcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcC
Confidence 357789999 699999999999999 99999999863321 1 111111 1 23455541 3357
Q ss_pred CCEEEEccCCCCCC------Ch-----HHHHHHHHHHh--CC--CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 143 FPYVIFCAPPSRSL------DY-----PGDVRLAALSW--NG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~------~~-----~~~~~~l~~~~--~~--v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+|-|+|+++.+... .| .-++.+++++. .+ ..||.+.||...||.....+.+|.+|..| +++|+
T Consensus 79 PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyP--rSPYA 156 (345)
T COG1089 79 PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYP--RSPYA 156 (345)
T ss_pred chhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCC--CCHHH
Confidence 99999999976532 11 12233343322 22 46999999999999988889999999999 68999
Q ss_pred HHHHHHHHHH
Q 024494 208 DVLLKAEKVI 217 (267)
Q Consensus 208 ~~k~~aE~~l 217 (267)
.+|+.+-=..
T Consensus 157 vAKlYa~W~t 166 (345)
T COG1089 157 VAKLYAYWIT 166 (345)
T ss_pred HHHHHHHhee
Confidence 9998875443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-08 Score=90.10 Aligned_cols=139 Identities=13% Similarity=0.070 Sum_probs=89.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-----~v~~d~~d~~-----------~~~~~ 143 (267)
+++||+|+ |.||++++++|.++ |++|+.++|+.++.+.+. .. .+.+|+.|++ .....
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEA--GARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 78999996 99999999999999 999999999865443221 11 1334565542 12468
Q ss_pred CEEEEccCCCCCC----C----hH-------HHHHHHH---HH----hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL----D----YP-------GDVRLAA---LS----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~----~----~~-------~~~~~l~---~~----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++..... . +. .....++ .. ..+.++||++||...+...... ..+
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~-------~~~- 162 (259)
T PRK08213 91 DILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE-------VMD- 162 (259)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc-------ccC-
Confidence 9999999853211 1 11 1111111 11 1245799999997665432110 011
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + +.+++|+.+-.+.
T Consensus 163 -~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~ 203 (259)
T PRK08213 163 -TIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKM 203 (259)
T ss_pred -cchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcc
Confidence 247999999998877654 2 6788898886653
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-08 Score=89.15 Aligned_cols=135 Identities=16% Similarity=0.063 Sum_probs=88.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|.++ |++|++++|++++...+. ..+ +..|+.|++ ...++
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEA--GATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 78999996 99999999999999 999999999876443321 111 233555531 12579
Q ss_pred CEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|+|||+++...... +. ....++. . ...+.+++|++||...+.... .
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~-- 152 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAP-----------K-- 152 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCC-----------C--
Confidence 99999998643211 11 1111111 1 112356999999976653211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + +..++|+.+..+.
T Consensus 153 ~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (250)
T PRK12939 153 LGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA 193 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCcc
Confidence 236888999888876643 2 7889999987775
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.5e-08 Score=88.53 Aligned_cols=135 Identities=10% Similarity=0.021 Sum_probs=86.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~~ 152 (267)
+++||+|+ |+||+.++++|+++ |++|++++|+........-..+..|+.|.+ ....+|+|||+++.
T Consensus 9 k~vlItGas~~iG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~ 86 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEA--GAKVIGFDQAFLTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGI 86 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEecchhhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 78999996 99999999999999 999999999761110000012344555531 23568999999986
Q ss_pred CCCCC--------hHHH-------HHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHH
Q 024494 153 SRSLD--------YPGD-------VRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (267)
Q Consensus 153 ~~~~~--------~~~~-------~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~ 211 (267)
..... +... ...++. ...+.+++|++||...... ..+ ...|+.+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-----------~~~--~~~Y~~sK~ 153 (252)
T PRK08220 87 LRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-----------RIG--MAAYGASKA 153 (252)
T ss_pred CCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC-----------CCC--CchhHHHHH
Confidence 43211 1111 111111 1124568999999765321 111 246889998
Q ss_pred HHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 212 KAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 212 ~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|.+++.+ + +.+++|+.++++.
T Consensus 154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 185 (252)
T PRK08220 154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDM 185 (252)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEecCcCcchh
Confidence 888776543 3 7889999999985
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.8e-08 Score=88.75 Aligned_cols=137 Identities=15% Similarity=0.105 Sum_probs=87.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cCeeeecCCcc-----------ccCCCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~v~~d~~d~~-----------~~~~~D~V 146 (267)
..++|+|+|+ |.||.+++++|.++ |++|++++|+......+.. ..+.+|+.|++ ...++|+|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAE--GATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3478999996 99999999999999 9999999998665433221 12345665541 22468999
Q ss_pred EEccCCCCC--C---C-----hHHHHH-----------HHH--HHhCCCCcEEEEcCC-ccccCCCCCccCCCCCCCCCC
Q 024494 147 IFCAPPSRS--L---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 147 i~~a~~~~~--~---~-----~~~~~~-----------~l~--~~~~~v~r~V~~SS~-~VYg~~~~~~~~E~~p~~p~~ 202 (267)
||+++.... . + +...+. .++ +...+..++|++||. ++||... .
T Consensus 84 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~-----------~-- 150 (255)
T PRK06057 84 FNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSAT-----------S-- 150 (255)
T ss_pred EECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCC-----------C--
Confidence 999985421 1 1 111110 111 112345689999885 4565321 1
Q ss_pred CCHHHHHHHHHHHHHH----Hc---C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVIL----EF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~----~~---~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+ ++ + ++++||+.+.++.
T Consensus 151 ~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~ 191 (255)
T PRK06057 151 QISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPL 191 (255)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCch
Confidence 2358888876655443 22 3 7889999999885
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.9e-08 Score=87.09 Aligned_cols=134 Identities=11% Similarity=0.073 Sum_probs=83.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhcc--C---eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINM--G---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~--~---v~~d~~d~~-----------~~~~ 142 (267)
+++||+|+ |+||++++++|+++ |++|++++|++.. ... +... . +..|+.+.+ ...+
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQ--GANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999996 99999999999999 9999888887543 111 1111 1 223555431 1247
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCc-cccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++...... +. ....++. . ...+.+++|++||.. +|+...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~------------ 151 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPG------------ 151 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCC------------
Confidence 899999998643211 11 1111111 1 122457899999864 444211
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++++||+.+..+.
T Consensus 152 --~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~ 192 (248)
T PRK05557 152 --QANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDM 192 (248)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcc
Confidence 236888888887665432 2 7889999886653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.4e-08 Score=88.42 Aligned_cols=135 Identities=19% Similarity=0.124 Sum_probs=86.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC--e---eeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--I---TPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~--v---~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|+++ |++|++++|+++...++ ...+ + ..|+.+++ .+.++
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKE--GVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 67999996 99999999999999 99999999986543322 1111 2 23444431 23479
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|+|||+++...... +.. ...++. . ...+.+++|++||...+.... +
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~-----------~-- 152 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAA-----------V-- 152 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCC-----------C--
Confidence 99999998643211 111 111111 1 123567899999977553211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+++.+ + ++++||+.+..+.
T Consensus 153 ~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~ 193 (239)
T PRK07666 153 TSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193 (239)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcc
Confidence 235888888777665432 3 8889999998774
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.4e-08 Score=91.96 Aligned_cols=134 Identities=17% Similarity=0.180 Sum_probs=86.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~~ 143 (267)
++|+|+|+ |.||++++++|+++ |++|++++|+.+..+++.+ . .+..|+.|.+ ...++
T Consensus 41 k~vlItGasggIG~~la~~La~~--G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARR--GATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 68999996 99999999999999 9999999998765433321 1 1234555531 23578
Q ss_pred CEEEEccCCCCCCC-------h---HHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD-------Y---PGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~~~-------~---~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
|+|||+||...... + ... ++.++ +...+.+++|++||.++++.. . |
T Consensus 119 d~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------~---p 187 (293)
T PRK05866 119 DILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEA--------S---P 187 (293)
T ss_pred CEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC--------C---C
Confidence 99999998643211 0 000 01111 112356899999998766421 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCcccc
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYI 232 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyG 232 (267)
. ...|+.+|.+.+.+.+.. + +++++|+.+-.
T Consensus 188 ~-~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T 227 (293)
T PRK05866 188 L-FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVAT 227 (293)
T ss_pred C-cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccC
Confidence 1 246999999888765443 2 67788887643
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.1e-08 Score=92.76 Aligned_cols=146 Identities=11% Similarity=-0.038 Sum_probs=87.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhc----cC---eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----MG---ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~----~~---v~~d~~d~~-----------~~ 140 (267)
.++|+|||+ |.||++++++|.++ |++|++++|+.++... +.. .. +..|+.|.+ ..
T Consensus 16 ~k~vlItGas~gIG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 16 GRVAVVTGANTGLGYETAAALAAK--GAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 378999996 99999999999999 9999999998654322 111 11 234555531 23
Q ss_pred CCCCEEEEccCCCCC------CCh-------HHH----HHHHHH--HhCCCCcEEEEcCCccc--cCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS------LDY-------PGD----VRLAAL--SWNGEGSFLFTSSSAIY--DCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~------~~~-------~~~----~~~l~~--~~~~v~r~V~~SS~~VY--g~~~~~~~~E~~p~~ 199 (267)
.++|+|||+|+.... +++ ..+ ++.++. ...+.+++|++||.+.+ +........++.+..
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 173 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN 173 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence 468999999985321 111 111 112211 12345799999998754 321111122222222
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C----eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G----GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~----~~IlR~~~iyGp 233 (267)
+ ...|+.+|++.|.+.+.+ + .+.+.||.+..+
T Consensus 174 ~--~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 174 R--VAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred c--HHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 2 358999999888776543 2 233578877654
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.9e-08 Score=89.92 Aligned_cols=122 Identities=13% Similarity=-0.007 Sum_probs=77.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++++||||+ |+||++++++|+++ |++|++++|+.+...+.. ..+ +..|+.|.+ ...+
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAAL--GMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 99999999999999 999999999765443221 112 234555541 1236
Q ss_pred CCEEEEccCCCCCCC--------h-------HHHHHH----H---HHHhCC-----CCcEEEEcCCccccCCCCCccCCC
Q 024494 143 FPYVIFCAPPSRSLD--------Y-------PGDVRL----A---ALSWNG-----EGSFLFTSSSAIYDCSDNGACDED 195 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~-------~~~~~~----l---~~~~~~-----v~r~V~~SS~~VYg~~~~~~~~E~ 195 (267)
+|+|||+|+...... + ..+..+ + +.+... .+++|++||...|....
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 156 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPP------- 156 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-------
Confidence 899999999653211 1 111111 1 111111 25899999987764321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
. ...|+.+|...|.+++.+
T Consensus 157 ----~--~~~Y~~sK~a~~~~~~~l 175 (287)
T PRK06194 157 ----A--MGIYNVSKHAVVSLTETL 175 (287)
T ss_pred ----C--CcchHHHHHHHHHHHHHH
Confidence 1 246999999998877653
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2e-08 Score=87.14 Aligned_cols=138 Identities=16% Similarity=0.121 Sum_probs=86.6
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhhc----cC-----eeeecCCcc-----------c
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELIN----MG-----ITPSLKWTE-----------A 139 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~~----~~-----v~~d~~d~~-----------~ 139 (267)
.+|++|||+|+ |.||++++++|+++ |++|+.+ +|++++...+.. .+ +..|+.|++ .
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~--g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 80 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKE--GAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK 80 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 34578999996 99999999999999 9999999 887665433211 11 233555431 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
..++|+|||+++...... +.. +...++ . ...+.+++|++||...+.... .
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~---------~ 151 (247)
T PRK05565 81 FGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGAS---------C 151 (247)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCC---------C
Confidence 237999999998653211 111 111111 1 112467899999976553211 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+..++.. + ++++||+.+..+.
T Consensus 152 ----~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~ 192 (247)
T PRK05565 152 ----EVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEM 192 (247)
T ss_pred ----ccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcc
Confidence 135888887766654432 3 7889999986654
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.6e-08 Score=87.28 Aligned_cols=135 Identities=16% Similarity=0.114 Sum_probs=86.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCcc------------ccCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWTE------------ATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~~------------~~~~~D~Vi 147 (267)
+++|+|+|+ |.||+++++.|+++ |++|++++|++++.+.+...++ .+|+.|.+ .....|.+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRR--GYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 467999997 99999999999999 9999999998776554433333 33444431 114679999
Q ss_pred EccCCCCCCC--------hHH-------HHHH----HHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 148 FCAPPSRSLD--------YPG-------DVRL----AAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 148 ~~a~~~~~~~--------~~~-------~~~~----l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
|+++...... +.+ +..+ ++. ...+.+++|++||...+... + . ...|
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------~--~--~~~Y 146 (256)
T PRK08017 80 NNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIST---------P--G--RGAY 146 (256)
T ss_pred ECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCC---------C--C--ccHH
Confidence 9998542111 111 1111 111 12356789999986433211 1 1 2479
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+.+|...|.+.+.. + ++++||+.+..+
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~ 182 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTR 182 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccc
Confidence 99999998765432 2 788899876543
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.4e-08 Score=88.76 Aligned_cols=134 Identities=14% Similarity=-0.032 Sum_probs=85.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCeeeecCCcc-----------ccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~~d~~d~~-----------~~~~~D~V 146 (267)
.+++||||+ |.||++++++|.++ |++|++.+|++++...+.. ..+..|+.|++ ...++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAAL--GARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 368999996 99999999999999 9999999998766543321 12334665541 23578999
Q ss_pred EEccCCCCCCC--------hHHH-------HHH----HH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSLD--------YPGD-------VRL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~-------~~~----l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+++...... +.+. ... ++ +...+.+++|++||...+... | . ...
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~~ 149 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPV---------P--G--MAT 149 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCC---------C--C--Ccc
Confidence 99998643211 1111 111 11 122356799999998655321 1 1 246
Q ss_pred HHHHHHHHHHHHHH-------cC--eeEEeeCcccc
Q 024494 206 RTDVLLKAEKVILE-------FG--GCVLRLAGLYI 232 (267)
Q Consensus 206 y~~~k~~aE~~l~~-------~~--~~IlR~~~iyG 232 (267)
|+.+|...+.+.+. .+ +++++|+.+-.
T Consensus 150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t 185 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNT 185 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcc
Confidence 88888766644322 23 88999988744
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.2e-08 Score=86.41 Aligned_cols=136 Identities=11% Similarity=0.035 Sum_probs=86.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchh----hhcc-----CeeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINM-----GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~----l~~~-----~v~~d~~d~~-----------~~~ 141 (267)
+++|||+|+ |+||++++++|+++ |++|+...|+. +.... +... .+..|+.+++ ...
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKE--GSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 99998877643 22211 1111 1234554431 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-------HHHH---H-HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~-~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
++|+|||+++...... +.+.. ..+. . .....++||++||...|... .+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~-- 150 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA-----------YG-- 150 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC-----------CC--
Confidence 7899999998532211 11110 1111 1 11134689999998877421 12
Q ss_pred CCHHHHHHHHHHHHHHHc------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + +.+++|+.+.++.
T Consensus 151 ~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~ 190 (252)
T PRK06077 151 LSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKL 190 (252)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChH
Confidence 357999999998877653 2 6788999888774
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.91 E-value=3e-08 Score=87.82 Aligned_cols=133 Identities=8% Similarity=0.085 Sum_probs=87.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
.+++||||+ |.||++++++|.++ |++|++++|+....... ..+.+|+.|++ ...++|+|||+|+
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~--~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag 81 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEE--GSNVINFDIKEPSYNDV--DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAG 81 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCccccCce--EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 378999996 99999999999999 99999999986543211 13445665541 2357999999998
Q ss_pred CCCCC-----C---hHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSL-----D---YPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~-----~---~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
..... + +.+. ...+. . ...+.+++|++||...+.... . ...|+.+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~~sK 148 (258)
T PRK06398 82 IESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTR-----------N--AAAYVTSK 148 (258)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCC-----------C--CchhhhhH
Confidence 64321 1 1111 11111 1 123467999999987664211 1 24688999
Q ss_pred HHHHHHHHHc----C----eeEEeeCccccC
Q 024494 211 LKAEKVILEF----G----GCVLRLAGLYIS 233 (267)
Q Consensus 211 ~~aE~~l~~~----~----~~IlR~~~iyGp 233 (267)
.+.|.+.+.+ + +..++|+.+-.+
T Consensus 149 aal~~~~~~la~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 149 HAVLGLTRSIAVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEecCCccch
Confidence 9888876653 2 577888877544
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.91 E-value=3.2e-08 Score=86.40 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=87.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhccC-----eeeecCCcc-----------ccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG-----ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~~~-----v~~d~~d~~-----------~~~~~D 144 (267)
.++|||||+ |.||++++++|.++ |++|++++|+... ...+...+ +..|+.+.+ ...++|
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 5 GKVALVTGANTGLGQGIAVGLAEA--GADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999996 99999999999999 9999999986521 11111111 234555431 235799
Q ss_pred EEEEccCCCCCCC--------hHHHH-------HHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+|||+++...... +.+.+ ..+. . ...+ .+++|++||...|.... .
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------~---- 149 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGI---------R---- 149 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCC---------C----
Confidence 9999998643211 11111 1111 1 1123 46899999988775321 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.. + +.+++|+.+..+.
T Consensus 150 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 150 VPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred CchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 125888898888765543 3 7889999998775
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.9e-08 Score=88.13 Aligned_cols=136 Identities=16% Similarity=0.095 Sum_probs=86.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|.++ |++|++.+|+++..+++. ..+ +..|+.|++ ....
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARR--GARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 367999996 99999999999999 999999999865543321 112 234555531 2346
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+..... + +.. +...+. + ...+ .+++|++||...|... .+
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-----------~~ 152 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-----------AG 152 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-----------CC
Confidence 89999999864321 1 111 111111 1 1123 5789999998776421 11
Q ss_pred CCCCHHHHHHHH----HHHHHHHc---C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLK----AEKVILEF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~----aE~~l~~~---~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.. +|.+..++ + +++++|+.+.++.
T Consensus 153 --~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 193 (275)
T PRK05876 153 --LGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNL 193 (275)
T ss_pred --CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccccc
Confidence 2468899986 44444443 3 7889999988764
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=3.2e-08 Score=85.80 Aligned_cols=136 Identities=15% Similarity=0.065 Sum_probs=85.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-Ce---eeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-GI---TPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-~v---~~d~~d~~-----------~~~~~ 143 (267)
.++|+|+|+ |.||+++++.|+++ |++|++++|++++.+.+.. . .+ ..|+.+++ ...++
T Consensus 5 ~~~vlItGa~g~iG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 5 GKKVAIIGVSEGLGYAVAYFALKE--GAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 368999996 99999999999999 9999999998765543311 1 22 33454431 13457
Q ss_pred CEEEEccCCCCCCC--hHHHHHH-----------HH---HH-hCCCCcEEEEcCCcc-ccCCCCCccCCCCCCCCCCCCH
Q 024494 144 PYVIFCAPPSRSLD--YPGDVRL-----------AA---LS-WNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--~~~~~~~-----------l~---~~-~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~p~~~~~ 205 (267)
|.+|++++...... ..+.+.. ++ .. .....++|++||... ++. ..+ ...
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~~--~~~ 149 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----------SPD--QLS 149 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----------CCC--chH
Confidence 99999998543211 0111110 11 11 112367999998653 221 111 236
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|...+..++.. + ++++||++++++-
T Consensus 150 Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~ 187 (238)
T PRK05786 150 YAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDF 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCC
Confidence 888998777654432 3 8999999999873
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.8e-08 Score=88.05 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=86.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cC---eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MG---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~---v~~d~~d~~-----------~~~~ 142 (267)
.+++||+|+ |+||.+++++|+++ |++|++++|++++.+++.. .. +..|+.+++ ...+
T Consensus 10 ~~~vlItGasggIG~~~a~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 10 DQVAVVTGAGRGLGAAIALAFAEA--GADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 99999999999999 9999999998765433221 11 234555542 1347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHHH-------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAAL-------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~~-------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+...... +.. ....+.. ...+.+++|++||..-+.. ..+
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~-----------~~~ 156 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA-----------GRG 156 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-----------CCC
Confidence 899999998532211 111 1111111 1134578999998643211 111
Q ss_pred CCCCHHHHHHHHHHHHHHHcC--------eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~~--------~~IlR~~~iyGp 233 (267)
...|+.+|...|.+++.+. +..++|+.+..+
T Consensus 157 --~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~ 195 (263)
T PRK07814 157 --FAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTS 195 (263)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCc
Confidence 3479999999888776542 677888887654
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.6e-08 Score=86.29 Aligned_cols=135 Identities=13% Similarity=0.031 Sum_probs=85.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCe---eeecCCcc-----------ccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI---TPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v---~~d~~d~~-----------~~~~~D 144 (267)
++|+|+|+ |.||++++++|+++ |++|++++|++++...+.. ..+ ..|+.|.+ ...++|
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAE--GYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 67999996 99999999999999 9999999998765433221 122 23444431 234799
Q ss_pred EEEEccCCCCCCC--------hHHHH-------HHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~-------~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
+|||+++...... +.+.. ..++ .. ..+.+++|++||...+... .. ..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----------~~--~~ 151 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF-----------AG--GA 151 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC-----------CC--Cc
Confidence 9999998643211 11111 1111 11 1245789999997654321 11 23
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.+...+.+ + ++++||+.+..+.
T Consensus 152 ~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~ 190 (237)
T PRK07326 152 AYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF 190 (237)
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcc
Confidence 6888887776654432 3 8999999987653
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.4e-08 Score=86.89 Aligned_cols=135 Identities=13% Similarity=0.073 Sum_probs=88.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh---hhccC-----eeeecCCcc-----------ccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LINMG-----ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~---l~~~~-----v~~d~~d~~-----------~~~~~D 144 (267)
+++||+|+ |.||++++++|+++ |++|++++|+++.... +...+ +..|+.+++ ...++|
T Consensus 8 ~~ilItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEE--GAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHc--CCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 68999996 99999999999999 9999999998765411 11111 234555431 224789
Q ss_pred EEEEccCCCCC---CC----hHHHH-------HHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 145 YVIFCAPPSRS---LD----YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 145 ~Vi~~a~~~~~---~~----~~~~~-------~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
+|||+++.... .. +...+ ..+. .. ....+++|++||...+... + + ...
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------~--~--~~~ 152 (258)
T PRK08628 86 GLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ---------G--G--TSG 152 (258)
T ss_pred EEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC---------C--C--Cch
Confidence 99999985321 11 11111 1111 11 1234689999997654321 1 1 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|...|.+++.+ + +..+||+.++++.
T Consensus 153 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 153 YAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 999999998877653 2 7889999999985
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=5e-08 Score=85.72 Aligned_cols=135 Identities=12% Similarity=-0.027 Sum_probs=85.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
+++||+|+ |.||++++++|.++ |++|+.++|+++....... .-+..|+.|++ ...++|+|||+|+
T Consensus 7 k~~lItGas~gIG~~la~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag 84 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAA--GATVVVCGRRAPETVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAG 84 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCChhhhhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 78999996 99999999999999 9999999998643110000 11234555431 2356899999998
Q ss_pred CCCCCC--------hHH-------HHHHHH---H---H-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 152 PSRSLD--------YPG-------DVRLAA---L---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 152 ~~~~~~--------~~~-------~~~~l~---~---~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
...... +.+ ....+. . . ..+.+++|++||...+... +. ...|+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~-~~~Y~~s 151 (252)
T PRK07856 85 GSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS------------PG-TAAYGAA 151 (252)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC------------CC-CchhHHH
Confidence 543211 111 111111 1 1 1234689999997654321 11 2469999
Q ss_pred HHHHHHHHHHc----C----eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF----G----GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~----~----~~IlR~~~iyGp~ 234 (267)
|...|.+++.. + +..++|+.+..+.
T Consensus 152 K~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~ 184 (252)
T PRK07856 152 KAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQ 184 (252)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEEEeccccChH
Confidence 99998877653 2 6778898887663
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.88 E-value=3.7e-08 Score=87.50 Aligned_cols=135 Identities=16% Similarity=0.097 Sum_probs=86.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
|+|+|+|+ |.||++++++|.++ |++|++++|+.++.+.+. ..+ +..|+.|++ ...++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 78 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWARE--GWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGI 78 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47999996 99999999999999 999999999876543321 111 234554431 23579
Q ss_pred CEEEEccCCCCCCC----hHHH---------------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD----YPGD---------------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~----~~~~---------------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|+|||+++...... ..+. ++.++ +...+.+++|++||...+.... .
T Consensus 79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~-- 145 (270)
T PRK05650 79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGP-----------A-- 145 (270)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCC-----------C--
Confidence 99999999653211 0111 11111 1223568999999987654211 1
Q ss_pred CCHHHHHHHHHHHHHH----Hc---C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVIL----EF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~----~~---~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+...+ ++ + +++++|+.+..+.
T Consensus 146 ~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 186 (270)
T PRK05650 146 MSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNL 186 (270)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCc
Confidence 2468888887654433 32 3 8889999997764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=6e-08 Score=87.68 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=87.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhh----hccC-----eeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDEL----INMG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l----~~~~-----v~~d~~d~~-----------~~ 140 (267)
..+++||+|+ |.||.+++++|+++ |++|+.++|+... ...+ ...+ +.+|+.|.+ ..
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~--G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKE--GADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3478999996 99999999999999 9999999987532 1111 1111 234554431 23
Q ss_pred CCCCEEEEccCCCCC-C---C-----hHHH-------HHHHHH---H-hCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS-L---D-----YPGD-------VRLAAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~-------~~~l~~---~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.++|+|||+|+.... . + +... ..+++. . ....+++|++||...|.... .
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~---------~-- 191 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNE---------T-- 191 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCC---------C--
Confidence 478999999985321 1 1 1111 111111 1 11236899999998875421 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++.+||+.++.+.
T Consensus 192 --~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 192 --LIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred --cchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 125888888887765543 3 7889999998874
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=5e-08 Score=88.36 Aligned_cols=136 Identities=16% Similarity=0.141 Sum_probs=87.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chh----hhccC-----eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDE----LINMG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~----l~~~~-----v~~d~~d~~-----------~~ 140 (267)
.+++||||+ |.||++++++|.++ |++|+...++.+. ..+ +...+ +.+|+.|++ .+
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFARE--GADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 478999996 99999999999999 9999888765432 111 11112 234555531 23
Q ss_pred CCCCEEEEccCCCCC-C---C-----hHHH-------HHHHHHHh----CCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS-L---D-----YPGD-------VRLAALSW----NGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~-------~~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.++|+|||+|+.... . + +... ...++... ....++|++||...|.... .
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~ 201 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSP-----------T 201 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCC-----------C
Confidence 579999999985321 1 1 1111 11111111 1236999999998875321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + +.+++|+.++++.
T Consensus 202 --~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 202 --LLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred --chhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 236899999888776543 3 7889999999885
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.6e-08 Score=85.76 Aligned_cols=134 Identities=13% Similarity=0.063 Sum_probs=85.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---c---CeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---M---GITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~---~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||+|+ |.||++++++|.++ |++|+.++|+++....... . .+..|+.+++ ...+.|+|
T Consensus 16 k~vlItGas~~IG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v 93 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAK--GARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL 93 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 68999996 99999999999999 9999999998653221111 1 2334555431 23478999
Q ss_pred EEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccc-cCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~~~~ 204 (267)
||+++...... +.. +...+. . ...+.+++|++||...+ +.. . ..
T Consensus 94 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~--~~ 159 (255)
T PRK06841 94 VNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALE------------R--HV 159 (255)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCC------------C--Cc
Confidence 99998643211 111 111111 1 12246799999997643 321 1 23
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.. + +..++|+.+..+.
T Consensus 160 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 198 (255)
T PRK06841 160 AYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTEL 198 (255)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcc
Confidence 6888998887665543 2 7889999887664
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.87 E-value=4.4e-08 Score=85.49 Aligned_cols=134 Identities=13% Similarity=0.126 Sum_probs=87.4
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhhh----cc-------CeeeecCCcc-----------ccC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI----NM-------GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l~----~~-------~v~~d~~d~~-----------~~~ 141 (267)
+++|+|+ |.||+++++.|.++ |++|++++|+ .+..+.+. .. .+..|+.|++ ...
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQ--GAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG 78 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4899985 99999999999999 9999999997 44333221 11 1334555542 235
Q ss_pred CCCEEEEccCCCCCCC--------hHH-----------HHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-----------DVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-----------~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+++...... +.. .++.++. ...+.+++|++||...|.... .
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~---------~-- 147 (251)
T PRK07069 79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEP---------D-- 147 (251)
T ss_pred CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCC---------C--
Confidence 7899999998653211 111 1112211 123567999999988775321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C----eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G----GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~----~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.+.++.
T Consensus 148 --~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~ 190 (251)
T PRK07069 148 --YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGI 190 (251)
T ss_pred --CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcc
Confidence 236888998888766532 1 6788999998886
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.2e-08 Score=87.44 Aligned_cols=134 Identities=17% Similarity=0.041 Sum_probs=85.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC-----eeeecCCcc---c------------cCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG-----ITPSLKWTE---A------------TQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~-----v~~d~~d~~---~------------~~~ 142 (267)
||++||+|+ |.||++++++|.++ |++|++++|+.++.. ....+ +..|+.|.+ . ...
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~--G~~v~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 77 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQP--GIAVLGVARSRHPSL-AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS 77 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhC--CCEEEEEecCcchhh-hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence 579999996 99999999999999 999999999765321 11111 234554431 0 125
Q ss_pred CCEEEEccCCCCC-C---C-----hH-------HH----HHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRS-L---D-----YP-------GD----VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~-------~~----~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.|.+||+++.... . + +. .+ .+.+.. ...+.+++|++||...+... .+
T Consensus 78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~ 146 (243)
T PRK07023 78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAY-----------AG 146 (243)
T ss_pred ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCC-----------CC
Confidence 7899999986432 0 0 01 11 111111 12345799999998766421 12
Q ss_pred CCCCHHHHHHHHHHHHHHHc------C--eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~------~--~~IlR~~~iyGp 233 (267)
...|+.+|...|.+++.+ + +..++|+.+-.+
T Consensus 147 --~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 147 --WSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred --chHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 347999999999887643 2 677888877443
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.87 E-value=4e-08 Score=85.35 Aligned_cols=135 Identities=9% Similarity=0.055 Sum_probs=84.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--Ce---eeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--GI---TPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~v---~~d~~d~~-----------~~~~~D~ 145 (267)
++++||+|+ |+||++++++|.++ |+.|+..+|+.++.+.+.. . .+ ..|+.|.+ ...++|+
T Consensus 6 ~~~vlItGa~g~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 6 GRKALVTGASGGIGEEIARLLHAQ--GAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999996 99999999999999 9999998888665543321 1 12 33454431 2357899
Q ss_pred EEEccCCCCCC--------ChHH-------HHHHHHH------HhCCCCcEEEEcCCc-cccCCCCCccCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSL--------DYPG-------DVRLAAL------SWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 146 Vi~~a~~~~~~--------~~~~-------~~~~l~~------~~~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~~~ 203 (267)
|||+++..... ++.+ ....++. ...+.+++|++||.. .|+.+. .
T Consensus 84 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~--------------~ 149 (245)
T PRK12936 84 LVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPG--------------Q 149 (245)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCC--------------C
Confidence 99999864321 1111 1111111 113567899999975 444221 1
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.+...+.. + +++++|+.+..+.
T Consensus 150 ~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 189 (245)
T PRK12936 150 ANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAM 189 (245)
T ss_pred cchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCch
Confidence 25777777665544332 3 7889999886654
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.6e-08 Score=85.98 Aligned_cols=137 Identities=12% Similarity=0.071 Sum_probs=87.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCcc-------cc--CCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWTE-------AT--QKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~-------~~--~~~D~Vi~~a 150 (267)
|++++|+|+ |.||++++++|+++ |++|++++|+++..+++...+ +..|+.+.+ .+ .++|+|||++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRAD--GWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhC--CCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence 578999996 99999999999999 999999999876655554333 334555431 12 2589999999
Q ss_pred CCCCC--C---C-----hH-------HHHHHHHHHh-----CCCCcEEEEcCC-ccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 151 PPSRS--L---D-----YP-------GDVRLAALSW-----NGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 151 ~~~~~--~---~-----~~-------~~~~~l~~~~-----~~v~r~V~~SS~-~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+.... . + +. .....++.+. ....++|++||. ++|+... ..+ ...|+
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~--~~~Y~ 147 (222)
T PRK06953 79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT---------GTT--GWLYR 147 (222)
T ss_pred CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc---------CCC--ccccH
Confidence 86421 0 1 11 1111111111 123578898885 4555321 111 12588
Q ss_pred HHHHHHHHHHHHcC-------eeEEeeCccccC
Q 024494 208 DVLLKAEKVILEFG-------GCVLRLAGLYIS 233 (267)
Q Consensus 208 ~~k~~aE~~l~~~~-------~~IlR~~~iyGp 233 (267)
.+|...|.+++.+. +..++|+.+.-+
T Consensus 148 ~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~ 180 (222)
T PRK06953 148 ASKAALNDALRAASLQARHATCIALHPGWVRTD 180 (222)
T ss_pred HhHHHHHHHHHHHhhhccCcEEEEECCCeeecC
Confidence 89999888877642 678899988765
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.1e-08 Score=84.14 Aligned_cols=136 Identities=11% Similarity=0.082 Sum_probs=86.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhc----c--Ce---eeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN----M--GI---TPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~----~--~v---~~d~~d~~-----------~~~ 141 (267)
+++++|+|+ |.||++++++|.++ |++|++++|++.. ..++.. . .+ ..|+.|.+ ...
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~--g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 79 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLND--GYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEG 79 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999986 99999999999999 9999999998531 111110 0 12 23444431 234
Q ss_pred CCCEEEEccCCCCCCC--------hH-------HHHHHH----H--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YP-------GDVRLA----A--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~-------~~~~~l----~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.+|+|||+++...... +. .....+ + +...+.++||++||...+... +.
T Consensus 80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~---------~~-- 148 (245)
T PRK12824 80 PVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQ---------FG-- 148 (245)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCC---------CC--
Confidence 6899999998643211 11 111111 1 122356799999998766431 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|..+|.+.|.+++.+ + +.+++|+.+.++.
T Consensus 149 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 189 (245)
T PRK12824 149 --QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPM 189 (245)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcc
Confidence 136888998777665543 3 7889999998775
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=2.5e-08 Score=87.11 Aligned_cols=137 Identities=15% Similarity=0.068 Sum_probs=83.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchhh----hc-----cCeeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDEL----IN-----MGITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~l----~~-----~~v~~d~~d~~-----------~~ 140 (267)
||++|||+|+ |.||+.+++.|.++ |++|+.+. |+++....+ .. ..+.+|+.|++ ..
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAAR--GWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 5678999996 99999999999999 99998765 443332221 11 12334555431 23
Q ss_pred CCCCEEEEccCCCCCC----C-----hHH-------HHHHHH---HHh---CC---CCcEEEEcCCcc-ccCCCCCccCC
Q 024494 141 QKFPYVIFCAPPSRSL----D-----YPG-------DVRLAA---LSW---NG---EGSFLFTSSSAI-YDCSDNGACDE 194 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~----~-----~~~-------~~~~l~---~~~---~~---v~r~V~~SS~~V-Yg~~~~~~~~E 194 (267)
..+|+|||+++..... + +.. ....++ ... .+ ..++|++||... ++...
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~------ 152 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPN------ 152 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCC------
Confidence 5799999999854211 1 111 111111 111 11 246999998754 34211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. +..|+.+|...+.+.+.+ + ++++||+.+..+.
T Consensus 153 -----~--~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~ 194 (248)
T PRK06947 153 -----E--YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEI 194 (248)
T ss_pred -----C--CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccc
Confidence 0 135888888887655432 3 8899999998774
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.87 E-value=5.9e-08 Score=85.25 Aligned_cols=136 Identities=13% Similarity=0.062 Sum_probs=88.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||+|+ |.||++++++|+++ |++|+.++|++++...+ ...+ +..|+.|++ ....
T Consensus 9 ~k~~lItGas~giG~~ia~~L~~~--G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 9 GKNILITGSAQGIGFLLATGLAEY--GAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 368999996 99999999999999 99999999986654332 1111 223555431 2356
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-------HHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++...... +.... ..+. . ...+.+++|++||....... ..
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~- 154 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR-----------DT- 154 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC-----------CC-
Confidence 899999998643211 11111 1111 1 11245789999987532110 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + +..++|+.+..+.
T Consensus 155 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~ 195 (254)
T PRK08085 155 -ITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEM 195 (254)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcc
Confidence 246889999988877654 3 7889999998885
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.5e-08 Score=90.64 Aligned_cols=136 Identities=18% Similarity=0.124 Sum_probs=95.8
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccC-------eeeecCCc----cccCCCCEEEEccCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMG-------ITPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~-------v~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.-|.|+ ||+|+.++.+|.+. |-||+.--|..+. ...++-.| ..+|+.|+ +..+...+||++.|-.
T Consensus 64 aTVFGAtGFlGryvvnklak~--GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd 141 (391)
T KOG2865|consen 64 ATVFGATGFLGRYVVNKLAKM--GSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRD 141 (391)
T ss_pred EEEecccccccHHHHHHHhhc--CCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeeccc
Confidence 345597 99999999999999 9999999886543 22333222 23456665 3567899999999854
Q ss_pred CCC---C----hHHHHHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--e
Q 024494 154 RSL---D----YPGDVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (267)
Q Consensus 154 ~~~---~----~~~~~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~ 222 (267)
-.. + +....+.++ .+..|+.|||++|+.+.- ... .+.+-++|.+.|..+++.- .
T Consensus 142 ~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------------v~s--~Sr~LrsK~~gE~aVrdafPeA 206 (391)
T KOG2865|consen 142 YETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------------VKS--PSRMLRSKAAGEEAVRDAFPEA 206 (391)
T ss_pred cccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------------ccC--hHHHHHhhhhhHHHHHhhCCcc
Confidence 321 1 333344443 244689999999987721 111 2467789999999999863 9
Q ss_pred eEEeeCccccCCchHHH
Q 024494 223 CVLRLAGLYISLCYLVE 239 (267)
Q Consensus 223 ~IlR~~~iyGp~~~~l~ 239 (267)
+|+||+.|||..+.+++
T Consensus 207 tIirPa~iyG~eDrfln 223 (391)
T KOG2865|consen 207 TIIRPADIYGTEDRFLN 223 (391)
T ss_pred eeechhhhcccchhHHH
Confidence 99999999999965553
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=5.9e-08 Score=85.22 Aligned_cols=137 Identities=11% Similarity=0.044 Sum_probs=88.4
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++++|+|+ |.||+.++++|.++ |++|+.++|+++....+. ..+ +.+|+.|++ ...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGA--GAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 3488999996 99999999999999 999999999875433221 111 233555431 234
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
..|+|||+++...... +... ...+. . ...+.+++|++||...+....
T Consensus 88 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~------------ 155 (256)
T PRK06124 88 RLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARA------------ 155 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCC------------
Confidence 6899999998643211 1111 11111 1 123568999999976542211
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.+.+.+.. + +..++|+.+.++.
T Consensus 156 ~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 156 G-DAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred C-ccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 0 236888888877665442 2 7889999999885
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=7.7e-08 Score=83.19 Aligned_cols=139 Identities=15% Similarity=0.121 Sum_probs=86.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----CeeeecCCcc-------cc--CCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWTE-------AT--QKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~d~~d~~-------~~--~~~D~Vi~~ 149 (267)
|++++|+|+ |.||++++++|.++ |++|++++|+++..+.+... ....|+.|++ .+ .++|+|||+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLER--GWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhC--CCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 578999996 99999999999999 99999999988765443221 2334555541 11 369999999
Q ss_pred cCCCCC-----CC-hHHHH-----------HHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 150 APPSRS-----LD-YPGDV-----------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 150 a~~~~~-----~~-~~~~~-----------~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
++.... .+ ..+.. ..+. .. ..+..+++++||. +|... ..+... ...|+
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~--~g~~~------~~~~~~--~~~Y~ 148 (225)
T PRK08177 79 AGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ--LGSVE------LPDGGE--MPLYK 148 (225)
T ss_pred CcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC--ccccc------cCCCCC--ccchH
Confidence 986421 01 01111 1111 11 1133678888874 34321 011111 23588
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+|.+.|.+++.+ + +..++|+.+-.+.
T Consensus 149 ~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 149 ASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 9999999887653 2 6778999886553
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=4.7e-08 Score=87.12 Aligned_cols=135 Identities=13% Similarity=0.105 Sum_probs=88.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|.++ |++|++++|+++..+.+. ..+ +..|+.|.+ ...++
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARA--GAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999996 99999999999999 999999999865443321 111 234554431 23579
Q ss_pred CEEEEccCCCCCC------------------C-hHHHHH---------------HHH--HHhCCCCcEEEEcCCccccCC
Q 024494 144 PYVIFCAPPSRSL------------------D-YPGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCS 187 (267)
Q Consensus 144 D~Vi~~a~~~~~~------------------~-~~~~~~---------------~l~--~~~~~v~r~V~~SS~~VYg~~ 187 (267)
|+|||+++..... + ..+... .++ +...+.+++|++||...|...
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 168 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPL 168 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCC
Confidence 9999999843210 0 011111 111 111245789999998877431
Q ss_pred CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. . ...|+.+|.+.|.+++.+ + +..++|+.+..+.
T Consensus 169 ~-----------~--~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 169 T-----------K--VPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred C-----------C--CchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 1 1 236899999888776543 2 7889999998874
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=8.3e-08 Score=84.58 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=85.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchh----hhccC-----eeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINMG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~----l~~~~-----v~~d~~d~~-----------~~ 140 (267)
|++++||+|+ |.||++++++|+++ |++|+.+.++. +.... +...+ +.+|+.|++ ..
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQ--GFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3478999996 99999999999999 99999886643 32222 11112 234555531 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH---HH---hC-CCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---LS---WN-GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~~---~~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
..+|+|||+++...... +.+ ....++ .. .. ..+++|++||.... .+.
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~-----------~~~ 147 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH-----------TPL 147 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc-----------CCC
Confidence 56899999998643211 111 111111 11 11 23689999986422 122
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ ...|+.+|...+.+++.. + ++.++|+.++.+.
T Consensus 148 ~~--~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~ 190 (256)
T PRK12743 148 PG--ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPM 190 (256)
T ss_pred CC--cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcc
Confidence 22 247889998888775542 2 7889999999875
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.5e-08 Score=83.54 Aligned_cols=132 Identities=13% Similarity=0.092 Sum_probs=82.4
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchh----hhccC-----eeeecCCcc-----------ccCCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE----LINMG-----ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~----l~~~~-----v~~d~~d~~-----------~~~~~D 144 (267)
|||+|+ |.||++++++|+++ |++|++++|+. +.... +...+ +.+|+.|++ ....+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKE--GAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 578985 99999999999999 99999999875 22211 11112 233555431 124689
Q ss_pred EEEEccCCCCCCC--------hHH-------HHHHHHH---H---hCCCCcEEEEcCC-ccccCCCCCccCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPG-------DVRLAAL---S---WNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-------~~~~l~~---~---~~~v~r~V~~SS~-~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+|||+++...... +.. ....++. . ..+.++||++||. ++||.+.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~-------------- 144 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAG-------------- 144 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCC--------------
Confidence 9999999643211 111 1111111 1 1346799999996 4555321
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|..++.. + ++++||+.+.++.
T Consensus 145 ~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~ 185 (239)
T TIGR01830 145 QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDM 185 (239)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChh
Confidence 236888888777654432 3 7889999887764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.5e-08 Score=89.35 Aligned_cols=136 Identities=12% Similarity=0.098 Sum_probs=88.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++|+|||+ |.||++++++|.++ |++|++++|++++.+++. ..+ +..|+.|.+ .+..
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~--G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARR--GAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 367999996 99999999999999 999999999876543322 112 234555541 2357
Q ss_pred CCEEEEccCCCCCCC--------hHH-----------HHHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-----------DVRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-----------~~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|++||+++...... +.. .++.++ +...+.++||++||...|... |.
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~------------~~ 153 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSI------------PL 153 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCC------------Cc
Confidence 999999998643211 111 111111 122346789999999887532 11
Q ss_pred CCCHHHHHHHHHHHHHHH---------cC--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~---------~~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+. .+ +++++|+.+..|.
T Consensus 154 -~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~ 196 (334)
T PRK07109 154 -QSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ 196 (334)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCch
Confidence 24688888876654332 12 7889999987764
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=7.2e-08 Score=84.85 Aligned_cols=136 Identities=11% Similarity=0.050 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--C-----eeeecCCc-----------ccc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G-----ITPSLKWT-----------EAT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--~-----v~~d~~d~-----------~~~ 140 (267)
.++++|+|+ |.||+.++++|.++ |++|+.++|+.+..+++.. . + +.+|+.++ +..
T Consensus 9 ~k~~lItGa~~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 9 GQTALITGASKGIGLAIAREFLGL--GADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 378999996 99999999999999 9999999998765433221 1 1 23455443 134
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.+.|+|||+++...... +.. ....++ +...+.+++|++||...+....
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~----------- 155 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVR----------- 155 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCC-----------
Confidence 57899999998642211 111 111111 1123457999999987664321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|...+.+++.. + +..++|+.+..+.
T Consensus 156 ~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 156 S--GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred C--CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcc
Confidence 1 235888898888776543 2 7889999998875
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.6e-08 Score=84.18 Aligned_cols=135 Identities=15% Similarity=0.088 Sum_probs=87.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc--C---eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--G---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~--~---v~~d~~d~~-----------~~~~ 142 (267)
.+++||+|+ |.||..++++|.++ |++|++++|+ ++.+.+. .. . +.+|+.+.+ ....
T Consensus 15 ~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 15 GKVAIVTGGNTGLGQGYAVALAKA--GADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 9999999987 3322221 11 1 234555431 2347
Q ss_pred CCEEEEccCCCCCC--------ChHHHHH-------HHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL--------DYPGDVR-------LAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~~~~~-------~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|++||+++..... ++.+.+. .+. . ...+.+++|++||...|.... .
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~--- 159 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGK---------F--- 159 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCC---------C---
Confidence 89999999864321 1111111 111 1 123457999999988764321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 160 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 200 (258)
T PRK06935 160 -VPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTAN 200 (258)
T ss_pred -chhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccc
Confidence 236889999888776543 2 7889999988764
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=9.6e-08 Score=83.98 Aligned_cols=135 Identities=12% Similarity=0.059 Sum_probs=88.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++|+|+|+ |.||+.++++|.++ |++ |++++|++++.... ...+ +..|+.+++ ...+
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAER--GAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 67999996 99999999999999 999 99999986544322 1111 233555431 1246
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhC-CCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++...... +. ....+++ . ... ..+++|++||...|+... .
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~---------~-- 153 (260)
T PRK06198 85 LDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQP---------F-- 153 (260)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCC---------C--
Confidence 899999998643211 11 0111111 1 111 246899999988876321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + ++.++|+.++++.
T Consensus 154 --~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 154 --LAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred --cchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 246899999988876643 2 6779999999885
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.1e-08 Score=85.07 Aligned_cols=134 Identities=10% Similarity=0.075 Sum_probs=87.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|+++ |++|+.++|++++.++.. ..+ +.+|+.|.+ .....
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKA--GATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 67999996 99999999999999 999999999876543321 112 234555531 23568
Q ss_pred CEEEEccCCCCCC---C-----hHHHH-------HHH---HH---HhCCCCcEEEEcCCc-cccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL---D-----YPGDV-------RLA---AL---SWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-------~~l---~~---~~~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++..... + +.+.+ ..+ +. ...+.+++|++||.. .|+.. +
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~- 155 (265)
T PRK07097 89 DILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRE------------T- 155 (265)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCC------------C-
Confidence 9999999964321 1 11111 111 11 123567999999864 33321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.+..+.
T Consensus 156 -~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (265)
T PRK07097 156 -VSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQ 196 (265)
T ss_pred -CccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccc
Confidence 236889999888776654 2 7889999998874
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=6.9e-08 Score=84.13 Aligned_cols=134 Identities=17% Similarity=0.180 Sum_probs=86.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||+|+ |.||+.+++.|+++ |++|++++|++++..... ..+ +..|+.+++ ....+
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQK--GAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68999996 99999999999999 999999999875443221 111 233444431 12468
Q ss_pred CEEEEccCCCCC------------CC-----hHHH-------HHHH----H---HHhCCCCcEEEEcCCccccCCCCCcc
Q 024494 144 PYVIFCAPPSRS------------LD-----YPGD-------VRLA----A---LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (267)
Q Consensus 144 D~Vi~~a~~~~~------------~~-----~~~~-------~~~l----~---~~~~~v~r~V~~SS~~VYg~~~~~~~ 192 (267)
|+|||+++.... .+ +... ...+ . .+.....++|++||.+.|+...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~---- 159 (253)
T PRK08217 84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG---- 159 (253)
T ss_pred CEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCC----
Confidence 999999985321 00 1000 0000 0 1112335799999988775321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 193 ~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++.++|+.+.++.
T Consensus 160 ----------~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 160 ----------QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 246889999888775543 2 7889999998875
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=7e-08 Score=85.05 Aligned_cols=135 Identities=13% Similarity=0.092 Sum_probs=86.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c--cC-----eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~--~~-----v~~d~~d~~-----------~~ 140 (267)
.++++|+|+ |.||++++++|.++ |++|+.++|+++..+++. . .+ +..|+.|++ ..
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFARE--GAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 368999996 99999999999999 999999999866543321 1 11 233555531 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
..+|++||+|+...... +... ...+. . ...+.+++|++||...+...
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 152 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKII------------ 152 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCC------------
Confidence 57999999998643211 1111 11111 1 12345789999997654321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+. ...|+.+|.+.|.+.+.. + +..++|+.+-.+
T Consensus 153 ~~-~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 153 PG-CFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCh
Confidence 11 236899999888776553 2 677899888554
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-07 Score=83.68 Aligned_cols=133 Identities=11% Similarity=0.040 Sum_probs=85.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
.+++||+|+ |.||++++++|+++ |++|+.++|++..........+..|+.|++ ....+|+|||+|+
T Consensus 9 ~k~vlItG~s~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag 86 (266)
T PRK06171 9 GKIIIVTGGSSGIGLAIVKELLAN--GANVVNADIHGGDGQHENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAG 86 (266)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCccccccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 378999996 99999999999999 999999999876543211112345665541 2357899999998
Q ss_pred CCCCC------------C-----hHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 152 PSRSL------------D-----YPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 152 ~~~~~------------~-----~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
..... + +... ...+. . ...+..++|++||...+.... .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 154 (266)
T PRK06171 87 INIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSE-----------G- 154 (266)
T ss_pred ccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCC-----------C-
Confidence 53210 0 1111 11111 1 112346899999987653211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccc
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iy 231 (267)
...|+.+|...|.+++.+ + +.+++|+.+.
T Consensus 155 -~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 155 -QSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred -CchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 246888998888776543 2 7888998874
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=5.5e-08 Score=84.83 Aligned_cols=135 Identities=13% Similarity=0.129 Sum_probs=83.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchh----hhcc-----CeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINM-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~----l~~~-----~v~~d~~d~~-----------~~~~ 142 (267)
+.+||+|+ |.||++++++|.++ |++|+...++ ++.... +... .+.+|+.|.+ ....
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAER--GYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 56999996 99999999999999 9998877643 322221 1111 1344565541 2347
Q ss_pred CCEEEEccCCCCCC----C-----hHH-------HHHHHH---HHh---C--C-CCcEEEEcCCcc-ccCCCCCccCCCC
Q 024494 143 FPYVIFCAPPSRSL----D-----YPG-------DVRLAA---LSW---N--G-EGSFLFTSSSAI-YDCSDNGACDEDS 196 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~----~-----~~~-------~~~~l~---~~~---~--~-v~r~V~~SS~~V-Yg~~~~~~~~E~~ 196 (267)
.|+|||+++..... + +.. ....++ ... . + .+++|++||... |+.+.
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~-------- 152 (248)
T PRK06123 81 LDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPG-------- 152 (248)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCC--------
Confidence 89999999864321 0 111 111111 111 1 1 246999999754 44211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|...|.+++.+ + ++++||+.++++.
T Consensus 153 ---~--~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 153 ---E--YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred ---C--ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 0 124889999988876543 3 8999999999985
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=8.4e-08 Score=84.25 Aligned_cols=135 Identities=16% Similarity=0.136 Sum_probs=86.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|.++ |++|+.++|++++.+.+. ..+ +..|+.|++ ....+
T Consensus 7 k~~lItGas~giG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFARE--GAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 68999996 99999999999999 999999999876544332 111 233555431 23478
Q ss_pred CEEEEccCCCCC-CC--------hHHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-LD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~-~~--------~~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+.... .. +... .+.++ +...+.+++|++||...+.... + .
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--------~--~- 153 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGF--------P--G- 153 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCC--------C--C-
Confidence 999999986321 11 1111 01111 1123457899999976553110 1 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+-.+
T Consensus 154 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~ 193 (254)
T PRK07478 154 -MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTP 193 (254)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCc
Confidence 246889998888776543 2 678899998766
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=9.1e-08 Score=82.86 Aligned_cols=135 Identities=15% Similarity=0.070 Sum_probs=84.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----cccCCCCEEEEccCCCC---C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSR---S 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----~~~~~~D~Vi~~a~~~~---~ 155 (267)
++++|+|+ |.||++++++|.++ |++|++++|++.......-..+..|+.++ +....+|+|||+++... .
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~~~~~ 83 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQ--GAQVYGVDKQDKPDLSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILDDYKP 83 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHC--CCEEEEEeCCcccccCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCCCCCC
Confidence 68999996 99999999999999 99999999975432110001123344433 23467999999998431 1
Q ss_pred -CC-----hHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Q 024494 156 -LD-----YPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 156 -~~-----~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~ 216 (267)
.+ +... ..++. . ...+.+++|++||...+... +. ...|+.+|...|.+
T Consensus 84 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~----~~~Y~~sK~a~~~~ 150 (235)
T PRK06550 84 LLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG---------GG----GAAYTASKHALAGF 150 (235)
T ss_pred cccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC---------CC----CcccHHHHHHHHHH
Confidence 11 1111 11111 1 12245689999997654321 10 13577888877765
Q ss_pred HHH----c---C--eeEEeeCccccCC
Q 024494 217 ILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 217 l~~----~---~--~~IlR~~~iyGp~ 234 (267)
.+. + + +++++|+.+..+.
T Consensus 151 ~~~la~~~~~~gi~v~~v~pg~v~t~~ 177 (235)
T PRK06550 151 TKQLALDYAKDGIQVFGIAPGAVKTPM 177 (235)
T ss_pred HHHHHHHhhhcCeEEEEEeeCCccCcc
Confidence 543 2 3 7889999998775
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.5e-07 Score=81.43 Aligned_cols=137 Identities=11% Similarity=0.073 Sum_probs=84.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhhh-ccCe---eeecCCcc-------ccCCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI-NMGI---TPSLKWTE-------ATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l~-~~~v---~~d~~d~~-------~~~~~D~Vi~~a 150 (267)
.++|||+|+ |.||++++++|+++ |++|+.+.++ ++..+++. +.++ ..|+.|.+ ...+.|+|||++
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a 83 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTD--GANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA 83 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence 478999996 99999999999999 9999887664 33333321 1122 23444431 234689999999
Q ss_pred CCCCCC---C-----hHHH-------HHHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHH
Q 024494 151 PPSRSL---D-----YPGD-------VRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (267)
Q Consensus 151 ~~~~~~---~-----~~~~-------~~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~ 211 (267)
+..... + +... ...++ .. ....+++|++||..... .|..+ ...|+.+|.
T Consensus 84 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~--~~~Y~~sKa 151 (237)
T PRK12742 84 GIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR----------MPVAG--MAAYAASKS 151 (237)
T ss_pred CCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc----------CCCCC--CcchHHhHH
Confidence 864321 1 1111 11111 11 12346899999965311 11112 246899999
Q ss_pred HHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 212 KAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 212 ~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.|.+++.+ + +.+++|+.+..+.
T Consensus 152 a~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~ 183 (237)
T PRK12742 152 ALQGMARGLARDFGPRGITINVVQPGPIDTDA 183 (237)
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEecCcccCCc
Confidence 999776543 2 7889999987664
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.80 E-value=9.2e-08 Score=85.33 Aligned_cols=134 Identities=10% Similarity=0.037 Sum_probs=85.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cCeeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~v~~d~~d~~-----------~~~~~ 143 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++..+++.. ..+..|+.|++ ...++
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKH--GAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 368999996 99999999999999 9999999997654332211 12345666541 23479
Q ss_pred CEEEEccCCCCC--C---C-----hHH-------HHHHHHH---H---hCCCCcEEEEcCCcc-ccCCCCCccCCCCCCC
Q 024494 144 PYVIFCAPPSRS--L---D-----YPG-------DVRLAAL---S---WNGEGSFLFTSSSAI-YDCSDNGACDEDSPVV 199 (267)
Q Consensus 144 D~Vi~~a~~~~~--~---~-----~~~-------~~~~l~~---~---~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~ 199 (267)
|+|||+|+.... . + +.. +...++. . ..+.+++|++||... ++...
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~----------- 164 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLG----------- 164 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCC-----------
Confidence 999999985421 1 1 111 1111111 1 123467888887553 33211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+
T Consensus 165 ---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~ 204 (280)
T PLN02253 165 ---PHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204 (280)
T ss_pred ---CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccc
Confidence 136889999998876653 2 688999998765
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.80 E-value=7.8e-08 Score=84.14 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=84.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||.+++++|+++ |++|+.+.|+++....+ ...+ +..|+.|++ ....+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKD--GFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899996 99999999999999 99999999986543222 1112 233555531 23468
Q ss_pred CEEEEccCCCCCC-----C---hHHHH-------H----HHHH--HhCC-CCcEEEEcCCcc-ccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL-----D---YPGDV-------R----LAAL--SWNG-EGSFLFTSSSAI-YDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~~-----~---~~~~~-------~----~l~~--~~~~-v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~p 200 (267)
|+|||+++..... + +.... . .++. ...+ .+++|++||... ++.+ .
T Consensus 79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~ 146 (254)
T TIGR02415 79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNP------------I 146 (254)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCC------------C
Confidence 9999999864321 1 11111 0 1111 1112 368999988654 3321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.. + +.+++|+.+..+.
T Consensus 147 --~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~ 187 (254)
T TIGR02415 147 --LSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM 187 (254)
T ss_pred --CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChh
Confidence 246888998888776542 2 7889999886664
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.2e-07 Score=95.74 Aligned_cols=135 Identities=16% Similarity=0.113 Sum_probs=89.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----C---eeeecCCcc-----------ccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----G---ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~---v~~d~~d~~-----------~~~~~D 144 (267)
+++||+|+ |.||+++++.|.++ |++|++++|+++....+... . +..|+.|.+ ...++|
T Consensus 423 k~vLVTGasggIG~~la~~L~~~--Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAE--GACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 78999995 99999999999999 99999999987654332211 2 234555531 134799
Q ss_pred EEEEccCCCCCCC--------h-------HHHHHHHH------HHhCCC-CcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------Y-------PGDVRLAA------LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~-------~~~~~~l~------~~~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+|||+++...... + ..+...++ +...+. ++||++||...+... +.
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------------~~- 567 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------------PN- 567 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC------------CC-
Confidence 9999999643211 1 11111111 112233 789999997665321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccc-cCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY-ISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iy-Gp~ 234 (267)
...|+.+|...|.+++.+ + +.+++|+.+| +.+
T Consensus 568 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~ 609 (681)
T PRK08324 568 FGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSG 609 (681)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCc
Confidence 347999999999887653 2 7889999998 654
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-07 Score=82.48 Aligned_cols=134 Identities=16% Similarity=0.109 Sum_probs=85.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccC---eeeecCCcc-----------ccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMG---ITPSLKWTE-----------ATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~---v~~d~~d~~-----------~~~~~D~Vi~ 148 (267)
++++|+|+ |.||++++++|.++ |++|+.+.++.+. ...+...+ +..|+.|++ ...+.|+|||
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLRE--GAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 78999996 99999999999999 9999988765432 22332222 334555541 2357899999
Q ss_pred ccCCCCCCC--------hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~~--------~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+++...... +.. + ++.++ +...+.+++|++||...|+... + +...|+
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~-----------~-~~~~Y~ 153 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAA-----------E-GTTFYA 153 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCC-----------C-CccHhH
Confidence 998642211 111 1 11111 1123457999999987764211 1 124689
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCcccc
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYI 232 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyG 232 (267)
.+|.+.+.+.+.. + +..++|+.+--
T Consensus 154 asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t 187 (255)
T PRK06463 154 ITKAGIIILTRRLAFELGKYGIRVNAVAPGWVET 187 (255)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCC
Confidence 9998888766543 2 67889988743
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.1e-07 Score=84.29 Aligned_cols=135 Identities=15% Similarity=0.151 Sum_probs=86.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC--Cchhhh----ccC-----eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDELI----NMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~--~~~~l~----~~~-----v~~d~~d~~-----------~~~ 141 (267)
+++||||+ |.||++++++|.++ |++|+...|+.+ ..+++. ..+ +..|+.|.+ ...
T Consensus 50 k~vlITGas~gIG~aia~~L~~~--G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYARE--GADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 68999996 99999999999999 999998876532 222221 111 234555531 245
Q ss_pred CCCEEEEccCCCCC-C---C-----hHHH-------HHHHHH---Hh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRS-L---D-----YPGD-------VRLAAL---SW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~-~---~-----~~~~-------~~~l~~---~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
++|++||+|+.... . + +.+. ...++. .. ...+++|++||...|.... .
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~------------~ 195 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSP------------H 195 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCC------------C
Confidence 78999999985321 1 1 1111 111111 11 1236899999988775321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 196 -~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 196 -LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 236899999888765543 3 7889999999884
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-07 Score=83.29 Aligned_cols=135 Identities=15% Similarity=0.079 Sum_probs=83.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC------eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG------ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~------v~~d~~d~~-----------~~~~ 142 (267)
|+++|+|+ |.||++++++|.++ |++|++++|+++..+.. ...+ +..|+.|++ ...+
T Consensus 1 k~vlItGas~giG~~la~~la~~--G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQ--GAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 47999996 99999999999999 99999999986543322 1111 234555531 2356
Q ss_pred CCEEEEccCCCCCCC--------hHHH-------HHHHHH-------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGD-------VRLAAL-------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~~~l~~-------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+++...... +... ...+.. .....+++|++||...+... |.
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~---------~~-- 147 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL---------PW-- 147 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC---------CC--
Confidence 899999998643211 1111 111111 11224689999997543211 11
Q ss_pred CCCCHHHHHHHHHHHHHHH-------cC--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILE-------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~-------~~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+. .+ +++++|+.+.++.
T Consensus 148 --~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~ 188 (272)
T PRK07832 148 --HAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPL 188 (272)
T ss_pred --CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 23577788766544322 23 7899999998764
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.4e-07 Score=91.87 Aligned_cols=134 Identities=13% Similarity=0.066 Sum_probs=87.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||+|+ |.||++++++|.++ |++|++++|+.++.+++. ..+ +.+|+.|++ ....
T Consensus 315 ~~~~lv~G~s~giG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 315 GKLVVVTGAGSGIGRETALAFARE--GAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCEEEEECCcCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 478999996 99999999999999 999999999876544321 112 234565541 2346
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHHH------HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAAL------SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~------~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+||...... +. .+..++.. ...+ .+++|++||...|.... .
T Consensus 393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~ 461 (582)
T PRK05855 393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSR-----------S 461 (582)
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCC-----------C
Confidence 899999999643211 11 11111111 1122 36899999998886321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCcccc
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYI 232 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyG 232 (267)
...|+.+|.+.|.+.+.. + ++.+.|+.+-.
T Consensus 462 --~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 462 --LPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 247999999887765432 3 78889987744
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.4e-07 Score=80.65 Aligned_cols=135 Identities=16% Similarity=0.116 Sum_probs=85.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c------CeeeecCCc-------------ccc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M------GITPSLKWT-------------EAT 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~------~v~~d~~d~-------------~~~ 140 (267)
++++|+|+ |.||++++++|+++ |++|++++|++++.+.+.. . .+..|+.+. +..
T Consensus 7 k~vlItG~sggiG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAA--GATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 78999996 99999999999999 9999999998765433211 1 122344321 012
Q ss_pred -CCCCEEEEccCCCCC----CC-----hHHHHH-------HHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 -QKFPYVIFCAPPSRS----LD-----YPGDVR-------LAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 -~~~D~Vi~~a~~~~~----~~-----~~~~~~-------~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
..+|+|||+|+.... .+ +...+. .++ . ...+.+++|++||....- |
T Consensus 85 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~-----------~ 153 (239)
T PRK08703 85 QGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGET-----------P 153 (239)
T ss_pred CCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccccc-----------C
Confidence 568999999985311 11 111111 111 1 122457899998854321 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc--------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF--------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~--------~--~~IlR~~~iyGp~ 234 (267)
... ...|+.+|...|.+++.+ + +.+++|+.++++.
T Consensus 154 ~~~--~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~ 198 (239)
T PRK08703 154 KAY--WGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQ 198 (239)
T ss_pred CCC--ccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcc
Confidence 111 236899999988876542 2 7889999999986
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=1.9e-07 Score=82.37 Aligned_cols=137 Identities=13% Similarity=0.085 Sum_probs=85.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch---hhhccC-----eeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~---~l~~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
.++++|+|+ |.||++++++|+++ |++|++++|+....+ .+...+ +.+|+.+.+ .+...
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARH--GANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 378999996 99999999999999 999999999764211 111111 234555431 23578
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|+|||+++...... +.+ ....++ . ...+.+++|++||...... + .+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----------~-~~~- 151 (263)
T PRK08226 84 DILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMV----------A-DPG- 151 (263)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccc----------C-CCC-
Confidence 99999998642211 111 111111 1 1124578999998543110 0 011
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.+.++-
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~ 192 (263)
T PRK08226 152 ETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPM 192 (263)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHH
Confidence 246889999888776543 2 6789999998763
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.9e-07 Score=80.35 Aligned_cols=135 Identities=13% Similarity=0.072 Sum_probs=83.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++++|+|+ |.||++++++|+++ |++|+++.++ ++..+++ ...+ +.+|+.|++ ....
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQE--GAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHc--CCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 68999995 99999999999999 9999876553 3332222 1111 234555431 2346
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++...... +.+ ....++ . ...+.+++|++||...+... .+
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~- 152 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG-----------FG- 152 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC-----------CC-
Confidence 899999998643211 111 111111 1 11245689999996543211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.. + +++++|+.+.++.
T Consensus 153 -~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~ 193 (247)
T PRK12935 153 -QTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEM 193 (247)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChh
Confidence 246888998777665432 3 7889999998764
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.1e-07 Score=82.47 Aligned_cols=135 Identities=11% Similarity=0.064 Sum_probs=86.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~ 145 (267)
.++++|+|+ |.||++++++|.++ |++|++++|++++..++.. . .+..|+.|.+ ....+|+
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAA--GARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 378999996 99999999999999 9999999998765443321 1 1234555531 2357899
Q ss_pred EEEccCCCCCC---C----hHHHHH-------HHH---HH-h-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 146 VIFCAPPSRSL---D----YPGDVR-------LAA---LS-W-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 146 Vi~~a~~~~~~---~----~~~~~~-------~l~---~~-~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
|||+++..... . +.+.+. .+. .. . .+.+++|++||...+-... . ...|
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~-----------~--~~~Y 150 (261)
T PRK08265 84 LVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQT-----------G--RWLY 150 (261)
T ss_pred EEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------C--Cchh
Confidence 99999853211 1 111111 111 11 1 2346899999876432111 1 2368
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+.+|...+.+.+.. + +..++|+.+..+
T Consensus 151 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 151 PASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred HHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccCh
Confidence 88898887765542 3 788999987665
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.4e-07 Score=81.60 Aligned_cols=136 Identities=12% Similarity=0.023 Sum_probs=83.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhhh----c--cC---eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI----N--MG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l~----~--~~---v~~d~~d~~-----------~~~ 141 (267)
++++||+|+ |.||++++++|.++ |++|++++++. +....+. . .. +..|+.|.+ ...
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAH--GFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999996 99999999999999 99998887643 2222111 1 11 234555531 134
Q ss_pred CCCEEEEccCCCCCC---C-----h-------HHHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL---D-----Y-------PGDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~---~-----~-------~~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+..... + + ..+...++. .....+++|+++|...+... |
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~------------p 154 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN------------P 154 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC------------C
Confidence 689999999854321 1 1 111111111 11134678888876554321 2
Q ss_pred CCCCHHHHHHHHHHHHHHHcC--------eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~~--------~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+. ++.++|+.++...
T Consensus 155 ~-~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~ 195 (258)
T PRK09134 155 D-FLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSG 195 (258)
T ss_pred C-chHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCc
Confidence 1 2479999998887766531 6778998887544
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2e-07 Score=81.77 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=86.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|.++ |++|++++|+++..+.+. ..+ +..|+.|.+ .....
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFARE--GAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 78999996 99999999999999 999999999876543221 111 234554431 23467
Q ss_pred CEEEEccCCCCC-C--------ChHHH-------HH----HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-L--------DYPGD-------VR----LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~-~--------~~~~~-------~~----~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++.... . ++.+. .. .++ +...+.+++|++||...+.... .
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~-----------~- 153 (253)
T PRK06172 86 DYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAP-----------K- 153 (253)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCC-----------C-
Confidence 999999985321 1 01111 10 111 1123457899999988765321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..+.|+.+-.+.
T Consensus 154 -~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~ 194 (253)
T PRK06172 154 -MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDM 194 (253)
T ss_pred -CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 246889999888776543 2 6778998875553
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.9e-07 Score=81.75 Aligned_cols=134 Identities=13% Similarity=0.065 Sum_probs=85.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~~ 143 (267)
+++||+|+ |.||.+++++|.++ |++|+.++|+++..+.+.+ . .+.+|+.+.+ .....
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQ--GAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999996 99999999999999 9999999998654433221 1 1334554431 23468
Q ss_pred CEEEEccCCCCC-----C-C---hHHHHH-------HHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-----L-D---YPGDVR-------LAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~-----~-~---~~~~~~-------~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++.... + . +...++ .+. + ...+.+++|++||...+.. ..+
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----------~~~- 154 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP-----------GDF- 154 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC-----------CCC-
Confidence 999999985321 1 1 111111 111 1 1234679999998644321 111
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|...|.+++.+ + +..+.|+.+-.+
T Consensus 155 -~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~ 194 (252)
T PRK07035 155 -QGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTK 194 (252)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCc
Confidence 246999999999877654 2 678899888654
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=2.8e-07 Score=81.16 Aligned_cols=137 Identities=12% Similarity=0.036 Sum_probs=85.3
Q ss_pred CCCeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCC-----------Cc----hhhhccC-----eeeecCCcc-
Q 024494 83 GENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD-----------HH----DELINMG-----ITPSLKWTE- 138 (267)
Q Consensus 83 ~m~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~-----------~~----~~l~~~~-----v~~d~~d~~- 138 (267)
++++|||+|+ | .||..++++|.++ |++|++++|++. .. ..+...+ +..|+.+.+
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~--G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 81 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAK--GIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA 81 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHc--CCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3468999996 4 6999999999999 999999998721 11 0111111 233444431
Q ss_pred ----------ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHHH------HhCCCCcEEEEcCCccccCC
Q 024494 139 ----------ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAAL------SWNGEGSFLFTSSSAIYDCS 187 (267)
Q Consensus 139 ----------~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~------~~~~v~r~V~~SS~~VYg~~ 187 (267)
....+|+|||+++...... +. .+...+.. ...+.+++|++||...|+..
T Consensus 82 ~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~ 161 (256)
T PRK12748 82 PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM 161 (256)
T ss_pred HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC
Confidence 2356899999998642211 11 01111111 11234689999998766421
Q ss_pred CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. . ...|+.+|.+.|.+++.. + ++.++|+.+..+.
T Consensus 162 ~-----------~--~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~ 204 (256)
T PRK12748 162 P-----------D--ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGW 204 (256)
T ss_pred C-----------C--chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCC
Confidence 1 1 246999999999876543 2 7889999887653
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=2.7e-07 Score=81.17 Aligned_cols=137 Identities=13% Similarity=0.152 Sum_probs=86.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~ 141 (267)
..++|||+|+ |.||++++++|.++ |++|+.++|+.+..+.+. ..+ +.+|+.|.+ ...
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~--G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3588999996 99999999999999 999999999765543321 111 234555531 235
Q ss_pred CCCEEEEccCCCCCC--C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL--D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~--~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+.|+|||+++..... + +.+ +...++ . ...+.+++|++||...+.. ..+
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~- 155 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK-----------NIN- 155 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC-----------CCC-
Confidence 789999999854321 1 111 111111 1 1224468999999764321 111
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.. + +.++.|+.+--+.
T Consensus 156 -~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~ 196 (255)
T PRK06113 156 -MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_pred -cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccc
Confidence 246999999998887654 2 6777888776543
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.6e-07 Score=82.31 Aligned_cols=135 Identities=15% Similarity=0.121 Sum_probs=83.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchh----hhccC-----eeeecCCcc---------------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDE----LINMG-----ITPSLKWTE--------------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~----l~~~~-----v~~d~~d~~--------------- 138 (267)
++++|||+ |.||++++++|.++ |++|++.. |+.+...+ +...+ +..|+.+.+
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 68999996 99999999999999 99998875 44333222 11111 223443320
Q ss_pred c--cCCCCEEEEccCCCCCC---C-----hHHH-------HHHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 139 A--TQKFPYVIFCAPPSRSL---D-----YPGD-------VRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 139 ~--~~~~D~Vi~~a~~~~~~---~-----~~~~-------~~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
. ..++|+|||+|+..... + +... ...++ .. .....++|++||...+...+
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 153 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLP--------- 153 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCC---------
Confidence 1 12699999999854221 1 1111 11111 11 11346999999987653211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..+.|+.+.++.
T Consensus 154 --~--~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 154 --D--FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred --C--chhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 1 246999999998776543 2 7789999998875
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.5e-07 Score=80.53 Aligned_cols=137 Identities=13% Similarity=0.088 Sum_probs=86.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||+|+ |.||++++++|.++ |++|++++|+.+. ... +...+ +..|+.|++ ....
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQA--GADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67999986 99999999999999 9999999997543 121 21112 234555431 2356
Q ss_pred CCEEEEccCCCCCCC--------hHHH-------H----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++...... +... . +.++ +...+.+++|++||..-+..... + +
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-------~--~- 156 (254)
T PRK06114 87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRG-------L--L- 156 (254)
T ss_pred CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCC-------C--C-
Confidence 899999999643211 1111 1 1111 11234578999998764422110 0 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.. + +.+++|+.+..+.
T Consensus 157 -~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~ 197 (254)
T PRK06114 157 -QAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197 (254)
T ss_pred -cchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcc
Confidence 136888998887765543 2 7889999998775
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=3.4e-07 Score=81.61 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=86.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hcc-----CeeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~-----~v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+ +...++ ... .+..|+.|++ ....
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~--G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQE--GAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 478999996 99999999999999 9999999998 433222 111 1334555541 2356
Q ss_pred CCEEEEccCCCCC-C---C-----hHHHHH-H------H---HHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRS-L---D-----YPGDVR-L------A---ALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~~~~~-~------l---~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|++||+|+.... . + +...+. + + ++. ....+++|++||...+.... .
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 150 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADL-----------Y- 150 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCC-----------C-
Confidence 8999999986421 1 1 111110 0 0 011 11237999999987653211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+++.+ + +..+.|+.+..+
T Consensus 151 -~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 151 -RSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCc
Confidence 246999999888876653 2 788999988765
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.1e-07 Score=81.80 Aligned_cols=137 Identities=16% Similarity=0.087 Sum_probs=85.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+.++.+.+.. .+ +..|+.|++ ....+
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEA--GAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 67999996 99999999999999 9999999998765433321 11 234555531 23579
Q ss_pred CEEEEccCCCCCCC--------hHHH-------HHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGD-------VRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|++||+++...... +... ...+. . ...+ ..++|++||...+-.. . |.
T Consensus 88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------~---~~ 156 (253)
T PRK05867 88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------V---PQ 156 (253)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC--------C---CC
Confidence 99999998643211 1110 01111 1 1112 3579999886532100 0 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
....|+.+|.+.|.+.+.+ + +..++|+.+-.+.
T Consensus 157 ~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~ 198 (253)
T PRK05867 157 QVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTEL 198 (253)
T ss_pred CccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcc
Confidence 1236899999888876653 2 6778999887664
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.71 E-value=3e-07 Score=79.63 Aligned_cols=135 Identities=10% Similarity=0.094 Sum_probs=82.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhhh----cc-----CeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELI----NM-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l~----~~-----~v~~d~~d~~-----------~~~~ 142 (267)
+.+||+|+ |.||++++++|+++ |++|+++.| +++..+++. .. -+..|+.|++ ....
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKD--GYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899996 99999999999999 999999988 333222111 11 1233555431 2356
Q ss_pred CCEEEEccCCCCCC--------ChHH-------HHHH----HH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL--------DYPG-------DVRL----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~~-------~~~~----l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+++..... ++.. .... ++ +...+.+++|++||...+... + .
T Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~---------~--~- 146 (242)
T TIGR01829 79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ---------F--G- 146 (242)
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---------C--C-
Confidence 89999999854321 1111 1111 11 122356799999986433211 1 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+++.+ + +..++|+.+.++.
T Consensus 147 -~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~ 187 (242)
T TIGR01829 147 -QTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDM 187 (242)
T ss_pred -cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCcc
Confidence 235888888666554432 3 7889999998875
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.9e-07 Score=81.36 Aligned_cols=134 Identities=13% Similarity=0.026 Sum_probs=82.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----C---eeeecCCcc----------ccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----G---ITPSLKWTE----------ATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~---v~~d~~d~~----------~~~~~D~ 145 (267)
+++||+|+ |.||+.++++|+++ |++|++++|+++....+... . +..|+.|++ ....+|+
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAA--GARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 67999996 99999999999999 99999999987654433211 1 234555541 1356899
Q ss_pred EEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+++...... +. .+...+. . ...+.+++|++||...+... +. ..
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~------------~~-~~ 150 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY------------PG-YA 150 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC------------CC-cc
Confidence 999998643211 11 1111111 1 11234678988886433211 11 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.|+.+|...+.+++.. + ++.+.|+.+..+
T Consensus 151 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~ 188 (263)
T PRK09072 151 SYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTA 188 (263)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccc
Confidence 6888888776654432 2 677888877544
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.3e-07 Score=78.91 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=83.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++++|||+ |.||++++++|.++ |++|+.+.|+... ... +...+ +..|+.|++ ...+
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAAD--GFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 78999996 99999999999999 9999888775432 111 11111 234555431 2347
Q ss_pred CCEEEEccCCCCCCC--------hHHH-------HHHHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGD-------VRLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|+|||+++...... +... ...++ ... ...+++|++||...+... | + .
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~---------~--~--~ 150 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL---------P--G--Y 150 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC---------C--C--C
Confidence 999999998643211 1111 11111 111 133689999987654321 1 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..|+.+|...|.+++.. + +++++|+.+-.+
T Consensus 151 ~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~ 189 (245)
T PRK12937 151 GPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATE 189 (245)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCc
Confidence 46899999988777643 2 677899877554
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.1e-07 Score=78.99 Aligned_cols=134 Identities=15% Similarity=0.100 Sum_probs=83.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhhccC---eeeecCCcc-----------ccCCCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELINMG---ITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~~~~---v~~d~~d~~-----------~~~~~D~V 146 (267)
|++++||+|+ |.||++++++|.++ |++|++++|+++.. ..+...+ +..|+.|++ ...+.|++
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQ--GQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 3468999996 99999999999999 99999999986543 2222223 234554431 23468999
Q ss_pred EEccCCCCCC---C-----hHHHHH-----------HHH--HHhCC--CCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 147 IFCAPPSRSL---D-----YPGDVR-----------LAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 147 i~~a~~~~~~---~-----~~~~~~-----------~l~--~~~~~--v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
||+++..... + +.+.+. .++ +...+ .+++|++||...... .+ . .
T Consensus 79 v~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~---------~~--~--~ 145 (236)
T PRK06483 79 IHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG---------SD--K--H 145 (236)
T ss_pred EECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC---------CC--C--C
Confidence 9999853211 1 111110 110 11122 468999988653211 11 1 2
Q ss_pred CHHHHHHHHHHHHHHHcC--------eeEEeeCccc
Q 024494 204 SPRTDVLLKAEKVILEFG--------GCVLRLAGLY 231 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~~--------~~IlR~~~iy 231 (267)
..|+.+|...|.+.+.+. +..++|+.+.
T Consensus 146 ~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 146 IAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred ccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcee
Confidence 469999999998876542 6778998763
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.4e-07 Score=79.14 Aligned_cols=135 Identities=15% Similarity=0.142 Sum_probs=90.9
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCe---eeec---CC-ccccCCCCEEEEccCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGI---TPSL---KW-TEATQKFPYVIFCAPP 152 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v---~~d~---~d-~~~~~~~D~Vi~~a~~ 152 (267)
+.||..+|+|+ |..|+.|.+++++. |-+ .|+++.|+.-..+.- ...+ +.|- .+ .....++|+.|.|.+.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~-~~FSKV~~i~RR~~~d~at-~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT 93 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEA-PQFSKVYAILRRELPDPAT-DKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT 93 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhc-ccceeEEEEEeccCCCccc-cceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence 45688999997 99999999999998 233 899999874221111 1111 1121 11 1367899999999887
Q ss_pred CCCC-----------ChHHHHHHHHHHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 024494 153 SRSL-----------DYPGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG 221 (267)
Q Consensus 153 ~~~~-----------~~~~~~~~l~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~ 221 (267)
.+.. ||+-....+ ....|+++|+.+||.+.-.+ .+..|-+.|-+.|+.+.+..
T Consensus 94 TRgkaGadgfykvDhDyvl~~A~~-AKe~Gck~fvLvSS~GAd~s---------------SrFlY~k~KGEvE~~v~eL~ 157 (238)
T KOG4039|consen 94 TRGKAGADGFYKVDHDYVLQLAQA-AKEKGCKTFVLVSSAGADPS---------------SRFLYMKMKGEVERDVIELD 157 (238)
T ss_pred cccccccCceEeechHHHHHHHHH-HHhCCCeEEEEEeccCCCcc---------------cceeeeeccchhhhhhhhcc
Confidence 6532 133222222 23358999999999875221 12357788888888888765
Q ss_pred ---eeEEeeCccccCC
Q 024494 222 ---GCVLRLAGLYISL 234 (267)
Q Consensus 222 ---~~IlR~~~iyGp~ 234 (267)
++|+||+-+.|..
T Consensus 158 F~~~~i~RPG~ll~~R 173 (238)
T KOG4039|consen 158 FKHIIILRPGPLLGER 173 (238)
T ss_pred ccEEEEecCcceeccc
Confidence 9999999999986
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.8e-07 Score=92.95 Aligned_cols=133 Identities=14% Similarity=0.161 Sum_probs=86.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----------cCeeeecCCcc-----------c
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGITPSLKWTE-----------A 139 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----------~~v~~d~~d~~-----------~ 139 (267)
..+++||||+ |.||++++++|+++ |++|++++|+.+....+.. ..+..|+.|.+ .
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~--Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAE--GAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3478999996 99999999999999 9999999998654432211 02345665541 2
Q ss_pred cCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCC-CCcEEEEcCCccc-cCCCCCccCCCC
Q 024494 140 TQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIY-DCSDNGACDEDS 196 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~-v~r~V~~SS~~VY-g~~~~~~~~E~~ 196 (267)
..++|+|||+|+...... +.... +.++ +...+ ..++|++||...+ +..
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~--------- 561 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGK--------- 561 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCC---------
Confidence 347999999999643211 11111 0111 11122 3589999996543 321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccc
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iy 231 (267)
. ...|+.+|.+.|.+++.+ + +..++|+.++
T Consensus 562 ---~--~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 562 ---N--ASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred ---C--CHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 1 247999999999887653 2 6778888876
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=5.1e-07 Score=79.75 Aligned_cols=135 Identities=10% Similarity=0.011 Sum_probs=85.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-------CeeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-------GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-------~v~~d~~d~~-----------~~~ 141 (267)
+.++|+|+ |.||++++++|.++ |++|++++|++++..... .. .+..|+.|.+ ...
T Consensus 9 k~~lItGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEA--GASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 67999996 99999999999999 999999999876543321 11 1234555541 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.+|+|||+|+...... +...+ +.++ +...+.+++|++||...+... |
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 154 (265)
T PRK07062 87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE------------P 154 (265)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC------------C
Confidence 7899999998643211 11111 1111 112245799999997755321 1
Q ss_pred CCCCHHHHHHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.+.+.+. + + +..++|+.+..+.
T Consensus 155 ~-~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 196 (265)
T PRK07062 155 H-MVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQ 196 (265)
T ss_pred C-chHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccch
Confidence 1 23577777766655432 2 3 7788999886653
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=2.9e-07 Score=91.80 Aligned_cols=135 Identities=18% Similarity=0.123 Sum_probs=90.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.++++|+|+ |.||++++++|.++ |++|++++|+++...++. ..+ +..|+.|.+ ...+
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEA--GATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 368999996 99999999999999 999999999876543321 111 234555541 2347
Q ss_pred CCEEEEccCCCCCC----------ChHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL----------DYPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~----------~~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
+|+|||+|+..... ++... ...+. . ...+.+++|++||.+.|+..+ .
T Consensus 449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~- 518 (657)
T PRK07201 449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAP---------R- 518 (657)
T ss_pred CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC---------C-
Confidence 99999999853211 01111 11111 1 123567999999998875321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+.+.+ + +++++|+.+..+
T Consensus 519 ---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~ 558 (657)
T PRK07201 519 ---FSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTP 558 (657)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCccc
Confidence 246999999988876542 2 788999998765
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.67 E-value=3.6e-08 Score=85.64 Aligned_cols=170 Identities=12% Similarity=-0.014 Sum_probs=106.4
Q ss_pred EEEEc-ccHHhHHHHH-----HHHhcC--CCCeEEEEeCCCCCchhhhccCeeeecCCcc-ccCCCCEEEEccCCCCCC-
Q 024494 87 LLIVG-PGVLGRLVAE-----QWRQEH--PGCQIYGQTMTADHHDELINMGITPSLKWTE-ATQKFPYVIFCAPPSRSL- 156 (267)
Q Consensus 87 ILV~G-aG~IG~~La~-----~L~~~~--pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-~~~~~D~Vi~~a~~~~~~- 156 (267)
-++-+ .|+|+..|.. ++-+.+ .+|+|++++|.+.+. .+.++..|.. ....||.++++++.....
T Consensus 15 a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~------ritw~el~~~Gip~sc~a~vna~g~n~l~P 88 (315)
T KOG3019|consen 15 AVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA------RITWPELDFPGIPISCVAGVNAVGNNALLP 88 (315)
T ss_pred CCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc------ccccchhcCCCCceehHHHHhhhhhhccCc
Confidence 44444 4888877766 333330 129999999998764 2334333321 223677777776643211
Q ss_pred ------ChHHH--------HHHHHHHh--C--CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024494 157 ------DYPGD--------VRLAALSW--N--GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 157 ------~~~~~--------~~~l~~~~--~--~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
.+.+. ...++.+. + ..+.+|.+|.+++|.......++|+.+..- +....+..+++|...+
T Consensus 89 ~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qg--fd~~srL~l~WE~aA~ 166 (315)
T KOG3019|consen 89 IRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQG--FDILSRLCLEWEGAAL 166 (315)
T ss_pred hhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCC--hHHHHHHHHHHHHHhh
Confidence 12222 22232222 1 346899999999998877777888876654 4455667788888877
Q ss_pred HcC----eeEEeeCccccCCc----hHHHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 219 EFG----GCVLRLAGLYISLC----YLVEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 219 ~~~----~~IlR~~~iyGp~~----~~l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
..+ .+++|.+.+.|.+. .++-.++ |..-.++++.||+.|||..+++
T Consensus 167 ~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~ 221 (315)
T KOG3019|consen 167 KANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLV 221 (315)
T ss_pred ccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHH
Confidence 654 89999999999982 3333333 3333357788999999976653
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.3e-07 Score=80.16 Aligned_cols=135 Identities=12% Similarity=0.148 Sum_probs=85.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc----CeeeecCCcc-----------ccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM----GITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~----~v~~d~~d~~-----------~~~~~D 144 (267)
|++||||+ |-||+.++++|.++ |++|+.++|++++..+.. .. .+..|+.|++ ...+.|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKK--GARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 58999996 99999999999999 999999999876543221 11 1334555531 245799
Q ss_pred EEEEccCCCCC-----CC-----hHHH-----------HHHHHH---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 145 YVIFCAPPSRS-----LD-----YPGD-----------VRLAAL---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 145 ~Vi~~a~~~~~-----~~-----~~~~-----------~~~l~~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|||+++.... .+ +.+. .+.++. ...+.+++|++||...+... | +
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~---------~--~ 147 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM---------P--P 147 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC---------C--C
Confidence 99999985321 11 1111 011111 12245789999998764321 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+.. + +..+.|+.+-.+.
T Consensus 148 --~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~ 188 (259)
T PRK08340 148 --LVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPG 188 (259)
T ss_pred --chHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCcc
Confidence 246888898888766543 2 5567788776554
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=5.1e-07 Score=78.72 Aligned_cols=135 Identities=9% Similarity=0.093 Sum_probs=82.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCch----hhhccC--e---eeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHD----ELINMG--I---TPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~----~l~~~~--v---~~d~~d~~-----------~~~~ 142 (267)
+.++|+|+ |.||++++++|.++ |++|+++.+ +..... ++...+ + ..|+.|.+ ...+
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKD--GFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 56899996 99999999999999 999988654 322211 111112 1 24555431 2357
Q ss_pred CCEEEEccCCCCCCC--------hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+++...... +.+ . ++.++ +...+.+++|++||....... + .
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~--~- 149 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQ---------F--G- 149 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCC---------C--C-
Confidence 899999998643211 111 1 11111 122356799999986532110 0 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 150 -~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~ 190 (246)
T PRK12938 150 -QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190 (246)
T ss_pred -ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCch
Confidence 346888998777655432 2 7889999998875
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=5e-07 Score=79.01 Aligned_cols=136 Identities=16% Similarity=0.141 Sum_probs=84.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC------eeeecC--Cc-----------c
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG------ITPSLK--WT-----------E 138 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~------v~~d~~--d~-----------~ 138 (267)
..++|||+|+ |+||.+++++|+++ |++|++++|+++..+.+ ...+ +..|+. +. +
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~--G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARH--GATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 3478999996 99999999999999 99999999987554332 1111 123332 21 1
Q ss_pred ccCCCCEEEEccCCCCC-----C---C-hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 139 ATQKFPYVIFCAPPSRS-----L---D-YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~-----~---~-~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
....+|+|||+|+.... . + +.. +...+. +...+.++||++||...+...
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~--------- 159 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGR--------- 159 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCC---------
Confidence 23578999999985321 1 0 111 111111 122357899999997543211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+ . ...|+.+|.+.|.+++.+ + +.+++|+.+-.+
T Consensus 160 ~--~--~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 160 A--N--WGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred C--C--CcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCc
Confidence 1 1 235889999888876653 1 677888877544
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.65 E-value=6.8e-07 Score=78.68 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=85.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhccC-----eeeecCCc-----------cccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG-----ITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~~~-----v~~d~~d~-----------~~~~~~D 144 (267)
.+.+||+|+ |.||++++++|.++ |++|+++++.... ...+...+ +..|+.|. +...++|
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEA--GCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 368999996 99999999999999 9999998875421 11222112 23455553 1235799
Q ss_pred EEEEccCCCCCC---C-----hHHH-------HHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSL---D-----YPGD-------VRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 145 ~Vi~~a~~~~~~---~-----~~~~-------~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
++||+|+..... + +.+. ...+. . ...+ .+++|++||...|.... .
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------~---- 154 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI---------R---- 154 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCC---------C----
Confidence 999999864321 1 1111 11111 1 1112 36899999987775321 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.. + +..++|+.+--+.
T Consensus 155 ~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~ 195 (253)
T PRK08993 155 VPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNN 195 (253)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcc
Confidence 125888998888765543 2 6788999997654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.3e-07 Score=80.07 Aligned_cols=135 Identities=8% Similarity=0.074 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||+|+ |.||++++++|+++ |++|++++|+++..... ...+ +..|+.|++ ...+
T Consensus 9 ~k~ilItGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 9 GKNVVVVGGTSGINLGIAQAFARA--GANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 368999996 99999999999999 99999999986554322 1111 234555531 2346
Q ss_pred CCEEEEccCCCCCC--------ChH-------HHHHHHHH---Hh--CCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL--------DYP-------GDVRLAAL---SW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~-------~~~~~l~~---~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+|+|||+++..... ++. .+..++.. .. ...+++|++||...+... +.
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~------------~~- 153 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM------------PM- 153 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC------------CC-
Confidence 89999999743211 011 11111111 11 123689999997654211 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|...|.+++.. + ++.++|+.+.+.
T Consensus 154 ~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t 193 (264)
T PRK07576 154 QAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGT 193 (264)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCc
Confidence 247999999988887653 2 688999988753
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=6.1e-07 Score=81.19 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=87.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--C-----eeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~-----v~~d~~d~~-----------~~~~~ 143 (267)
.+++||+|+ |.||+.++++|.++ |++|++++|++++...+.+ . + +.+|+.|.+ ....+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHAR--GAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 378999996 99999999999999 9999999998765543321 1 1 125665541 23578
Q ss_pred CEEEEccCCCCCCC--------hHHH-------HHHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGD-------VRLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
|+|||+++...... +.+. ...++ .. ....+++|++||...+...+ . .
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~ 153 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAP-----------G--M 153 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCC-----------C--c
Confidence 99999999643211 1111 11111 11 11346899999987664321 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..|+.+|...|.+.+.. + +.++.|+.+..+
T Consensus 154 ~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~ 192 (296)
T PRK05872 154 AAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTD 192 (296)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccch
Confidence 47999999888776543 2 677889887655
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=6.4e-07 Score=81.85 Aligned_cols=145 Identities=11% Similarity=0.015 Sum_probs=88.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hc----cC---eeeecCCc-----------ccc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MG---ITPSLKWT-----------EAT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~----~~---v~~d~~d~-----------~~~ 140 (267)
.++++|||+ |.||.+++++|.++ |++|+.+.|+.++..+. .. .. +..|+.|. +..
T Consensus 14 gk~~lITGas~GIG~~~a~~La~~--G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 14 GKRAVVTGASDGLGLGLARRLAAA--GAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 378999996 99999999999999 99999999986654322 11 11 23455553 123
Q ss_pred CCCCEEEEccCCCCC-------CChHHHH-------H---HHHHH--hCCCCcEEEEcCCccc-cCCCCCccCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS-------LDYPGDV-------R---LAALS--WNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVP 200 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~-------~~~~~~~-------~---~l~~~--~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p 200 (267)
...|++||+|+.... +.+...+ . +.++. ..+..++|++||...+ +......+.++.+..+
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~ 171 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAG 171 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcc
Confidence 568999999985421 1111110 0 11111 1234689999987654 3221122333333333
Q ss_pred CCCCHHHHHHHHHHHHHHHc---------C--eeEEeeCcccc
Q 024494 201 IGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYI 232 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~---------~--~~IlR~~~iyG 232 (267)
...|+.+|++.+...+++ + +..+.||.+..
T Consensus 172 --~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 172 --MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred --hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 357999998887665432 2 56688887754
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.9e-07 Score=78.04 Aligned_cols=135 Identities=15% Similarity=0.112 Sum_probs=84.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCC-chh----hhcc---C---eeeecCCcc----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADH-HDE----LINM---G---ITPSLKWTE----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~-~~~----l~~~---~---v~~d~~d~~----------~~ 140 (267)
.++|||+|+ |.||++++++|+++ | ++|++++|++++ .++ +... . +..|+.|.+ ..
T Consensus 8 ~~~vlItGas~giG~~la~~l~~~--gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYLKN--APARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhc--CCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 378999996 99999999999998 6 899999998775 322 2211 1 234555431 11
Q ss_pred CCCCEEEEccCCCCCC-----ChH---HHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSL-----DYP---GDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~-----~~~---~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.+.|++|++++..... +.. +.+ +.++ +...+.+++|++||...+.. .+
T Consensus 86 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~---------~~-- 154 (253)
T PRK07904 86 GDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV---------RR-- 154 (253)
T ss_pred CCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC---------CC--
Confidence 4799999998864321 110 000 1111 12235689999999754321 01
Q ss_pred CCCCCHHHHHHHHHHHHH-------HHcC--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVI-------LEFG--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l-------~~~~--~~IlR~~~iyGp 233 (267)
+ ...|+.+|.+.+.+. ...+ +++++|+.+.-+
T Consensus 155 ~--~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~ 195 (253)
T PRK07904 155 S--NFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTR 195 (253)
T ss_pred C--CcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecc
Confidence 1 235888887766432 2233 899999999765
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.1e-07 Score=78.29 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=84.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhhhccC-----eeeecCCcc-----------ccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELINMG-----ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l~~~~-----v~~d~~d~~-----------~~~~~D~ 145 (267)
+++||||+ |.||++++++|.++ |++|++++|+.... ..+...+ +..|+.|.+ ...+.|+
T Consensus 9 k~~lItGas~gIG~aia~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKA--GADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 67999996 99999999999999 99999998864221 1111112 334555531 2357899
Q ss_pred EEEccCCCCCCC--------hHH-------HH----HHHH--HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPG-------DV----RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~----~~l~--~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+||+|+...... +.. .. +.++ +...+ .+++|++||...|.... . .
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------~----~ 153 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGI---------R----V 153 (251)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCC---------C----C
Confidence 999998643211 111 11 1111 11122 46899999987764321 1 1
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..|+.+|.+.+.+.+.. + +..++|+.+-.+
T Consensus 154 ~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~ 192 (251)
T PRK12481 154 PSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATD 192 (251)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccC
Confidence 25888998888765532 3 778899988655
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.9e-07 Score=78.52 Aligned_cols=135 Identities=13% Similarity=-0.007 Sum_probs=81.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhhhc---cC---eeeecCCcc-----------ccC--C
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELIN---MG---ITPSLKWTE-----------ATQ--K 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l~~---~~---v~~d~~d~~-----------~~~--~ 142 (267)
|+++||+|+ |.||+.++++|.++ |++|++++|++. ....+.+ .. +..|+.|++ ... +
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEK--GTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhc--CCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 578999996 99999999999999 999999999862 2222211 11 334555531 111 1
Q ss_pred C--CEEEEccCCCCC----CC-----hHH-----------HHHHHHHH--h-CCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 143 F--PYVIFCAPPSRS----LD-----YPG-----------DVRLAALS--W-NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 143 ~--D~Vi~~a~~~~~----~~-----~~~-----------~~~~l~~~--~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
. +++|++++.... .+ +.. ..+.++.. . .+.+++|++||...+..
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----------- 147 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP----------- 147 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC-----------
Confidence 2 278888875321 01 111 01111111 1 23468999999765421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc---------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~---------~--~~IlR~~~iyGp 233 (267)
..+ ...|+.+|.+.|.+++.+ + +..++|+.+-.+
T Consensus 148 ~~~--~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 148 YFG--WSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred CCC--cHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 112 247999999888876532 2 566788877544
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=7.3e-07 Score=82.39 Aligned_cols=135 Identities=12% Similarity=0.114 Sum_probs=86.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|.++ |++|+.++|+++..+++. ..+ +..|+.|++ ...++
T Consensus 8 k~vlITGAs~GIG~aia~~la~~--G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARR--GARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 68999996 99999999999999 999999999876654332 122 234665541 23578
Q ss_pred CEEEEccCCCCCCC--------hHHHHH-------HHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~-------~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+|+...... +.+.+. .+. +...+..++|++||...|... |.
T Consensus 86 D~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~------------p~- 152 (330)
T PRK06139 86 DVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ------------PY- 152 (330)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC------------CC-
Confidence 99999998543211 111111 110 112345789999998765321 11
Q ss_pred CCHHHHHHHHHHHHH----HHc----C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVI----LEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l----~~~----~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+. .+. + ++.+.|+.+..+.
T Consensus 153 ~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~ 194 (330)
T PRK06139 153 AAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPG 194 (330)
T ss_pred chhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcc
Confidence 246888888654332 232 3 6788999988774
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.4e-07 Score=80.57 Aligned_cols=167 Identities=15% Similarity=0.103 Sum_probs=103.4
Q ss_pred CCeEEEEc-ccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeeecCCc------cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~G-aG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d~~d~------~~~~~~D~Vi~~a~~~~ 154 (267)
|+||||+| .|.+|+++.+.+.++ |. +=.++.-+ -+.|+++. -.-+++..|||+|+...
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q--~~~~e~wvf~~s-----------kd~DLt~~a~t~~lF~~ekPthVIhlAAmVG 67 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQ--GFDDENWVFIGS-----------KDADLTNLADTRALFESEKPTHVIHLAAMVG 67 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhc--CCCCcceEEecc-----------ccccccchHHHHHHHhccCCceeeehHhhhc
Confidence 58999998 599999999999998 54 22222211 12233332 13468899999997543
Q ss_pred C----CCh-HHHHH-------HHHH-H-hCCCCcEEEEcCCccccCCCCCccCCCC----CCCCCCCCHHHHHHHHHH--
Q 024494 155 S----LDY-PGDVR-------LAAL-S-WNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAE-- 214 (267)
Q Consensus 155 ~----~~~-~~~~~-------~l~~-~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~----p~~p~~~~~y~~~k~~aE-- 214 (267)
. ..| .+-++ +++. + ..|++++|++.|+-+|.+....|++|+. |+.|.+ ..|.-.|..+.
T Consensus 68 Glf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN-~gYsyAKr~idv~ 146 (315)
T KOG1431|consen 68 GLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSN-FGYSYAKRMIDVQ 146 (315)
T ss_pred chhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCc-hHHHHHHHHHHHH
Confidence 2 111 11111 2221 2 2489999999999999988778898875 444432 24555554333
Q ss_pred --HHHHHcC--eeEEeeCccccCCc-----------hHHHHH---h--CC-ccee-cCCCccccHHHHHHhh
Q 024494 215 --KVILEFG--GCVLRLAGLYISLC-----------YLVEKF---Q--GL-PLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 215 --~~l~~~~--~~IlR~~~iyGp~~-----------~~l~~~---~--g~-~v~~-~~~~~~~n~IH~~~~~ 264 (267)
.+-++++ ++.+=|.++|||.. -++.++ + |. ++.+ +.+.....+||.+++|
T Consensus 147 n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA 218 (315)
T KOG1431|consen 147 NQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLA 218 (315)
T ss_pred HHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHH
Confidence 2233445 78899999999972 133332 2 33 3322 4455788999987765
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.6e-07 Score=79.12 Aligned_cols=134 Identities=18% Similarity=0.179 Sum_probs=81.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhhhc---cC---eeeecCCcc-----------ccCC-CC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELIN---MG---ITPSLKWTE-----------ATQK-FP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l~~---~~---v~~d~~d~~-----------~~~~-~D 144 (267)
+++||||+ |.||+++++.|.++ |++|+...++ ++....+.. .. +..|+.|++ .... +|
T Consensus 6 k~ilItGas~gIG~~la~~l~~~--G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFARE--GARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 68999996 99999999999999 9999887654 332222211 11 234554431 1233 99
Q ss_pred EEEEccCCCC-------C--CC-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 145 YVIFCAPPSR-------S--LD-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 145 ~Vi~~a~~~~-------~--~~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
+|||+++... . .+ +.+ ....++ . ...+.+++|++||...+. +
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~-----------~ 152 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN-----------P 152 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC-----------C
Confidence 9999997421 0 00 111 111111 1 123457899999854321 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..+ ...|+.+|.+.|.+++.+ + +..++|+.+-.+
T Consensus 153 ~~~--~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~ 195 (253)
T PRK08642 153 VVP--YHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTT 195 (253)
T ss_pred CCC--ccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCc
Confidence 222 246999999999887764 2 667888887654
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=7e-07 Score=78.37 Aligned_cols=134 Identities=13% Similarity=0.145 Sum_probs=83.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~~ 143 (267)
++++|+|+ |.||++++++|.++ |++|++++|+++....+.. . .+..|+.|++ .....
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEE--GANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 67999996 99999999999999 9999999998765433221 1 1334555541 23578
Q ss_pred CEEEEccCCCCC---CC-----hHHHH-------HHHH---HH---hCC-CCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS---LD-----YPGDV-------RLAA---LS---WNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~---~~-----~~~~~-------~~l~---~~---~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+++.... .+ +...+ ..+. .. ..+ .+++|++||..-+... + .
T Consensus 80 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~---------~-~-- 147 (252)
T PRK07677 80 DALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG---------P-G-- 147 (252)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC---------C-C--
Confidence 999999985321 11 11111 1111 11 112 3689999987533211 1 1
Q ss_pred CCCHHHHHHHHHHHHHHH--------cC--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILE--------FG--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~--------~~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+.+. ++ +..++|+.+..+
T Consensus 148 -~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 148 -VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred -CcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccc
Confidence 13577888887766543 23 788999999854
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.2e-06 Score=77.21 Aligned_cols=136 Identities=12% Similarity=0.082 Sum_probs=83.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||+|+ |.||++++++|.++ |++|+.+.|+... ... +...+ +..|+.|.+ ...
T Consensus 7 ~k~~lItGa~~gIG~~ia~~l~~~--G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 7 GKVVVITGGSTGLGRAMAVRFGKE--KAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 478999996 99999999999999 9999988885432 111 11111 234555541 234
Q ss_pred CCCEEEEccCCCCCCC--------hHHHHH-----------HHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDVR-----------LAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.+|++||+++...... +.+.+. .++. ...+ .+++|++||...+. |..
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~-----------~~~ 153 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI-----------PWP 153 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC-----------CCC
Confidence 6899999998643211 111111 1110 1122 46899999964332 111
Q ss_pred CCCCCHHHHHHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.+.+.+. + + +..++|+.+..+.
T Consensus 154 ~--~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 195 (261)
T PRK08936 154 L--FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_pred C--CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCc
Confidence 1 24688888776655443 2 3 7889999997774
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=9.7e-07 Score=78.47 Aligned_cols=134 Identities=13% Similarity=0.142 Sum_probs=85.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cC---eeeecCCcc----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MG---ITPSLKWTE----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~---v~~d~~d~~----------~~~~~ 143 (267)
+.+||||+ |-||++++++|.++ |++|++++|+.++..++.+ .. +..|+.|++ .....
T Consensus 9 k~~lItGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARA--GADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 67899996 89999999999999 9999999998655432211 11 234555541 12468
Q ss_pred CEEEEccCCCCCC---C-----hHHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL---D-----YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+++..... + +... ++.++ +...+.+++|++||...+... |.
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~------------~~- 153 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPI------------PN- 153 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCC------------Cc-
Confidence 9999999854321 1 1111 11111 122345799999998764321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+.+.. + +..+.|+.+..+
T Consensus 154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccH
Confidence 235777888777665442 2 677899988665
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.3e-06 Score=77.22 Aligned_cols=134 Identities=18% Similarity=0.126 Sum_probs=86.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc------CeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM------GITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~------~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||+|+ |.||++++++|+++ |++|++++|++++.+.+... .+..|+.|++ ....+|++
T Consensus 7 k~vlVtGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFLAE--GARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 68999996 99999999999999 99999999987655443221 1334555431 23578999
Q ss_pred EEccCCCCC--C--C---------hHH-------HHHHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 147 IFCAPPSRS--L--D---------YPG-------DVRLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 147 i~~a~~~~~--~--~---------~~~-------~~~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
||+++.... . + +.. ....+. .. ....+++|++||...|.... .
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~- 152 (263)
T PRK06200 85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGG-----------G- 152 (263)
T ss_pred EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------C-
Confidence 999986321 0 1 100 001111 11 11236899999987664211 1
Q ss_pred CCCHHHHHHHHHHHHHHHcC--------eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~~--------~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+.+... +..+.|+.+.-+
T Consensus 153 -~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 153 -GPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred -CchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccC
Confidence 2368999999888766532 667788877544
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.7e-06 Score=76.49 Aligned_cols=135 Identities=20% Similarity=0.157 Sum_probs=84.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-C-----eeeecCCc-----------cccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-----ITPSLKWT-----------EATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~-----v~~d~~d~-----------~~~~~~D~ 145 (267)
.++++|+|+ |.||++++++|+++ |++|++++|+.+..+++... + +..|+.|. +...++|+
T Consensus 5 ~k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 5 GEVVLVTGGASGLGRAIVDRFVAE--GARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 378999996 99999999999999 99999999987655444321 1 33455543 12357899
Q ss_pred EEEccCCCCC-------C------ChHHH-------HHHHH---HHh--CCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 146 VIFCAPPSRS-------L------DYPGD-------VRLAA---LSW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 146 Vi~~a~~~~~-------~------~~~~~-------~~~l~---~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+||+|+.... . ++.+. ...++ ... ...+++|++||...+... + .
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~---------~--~ 151 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN---------G--G 151 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC---------C--C
Confidence 9999985310 1 01111 11111 111 122578888876543211 0 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C----eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp 233 (267)
...|+.+|...|.+.+.+ + +..+.|+.+..+
T Consensus 152 --~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~ 190 (262)
T TIGR03325 152 --GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSD 190 (262)
T ss_pred --CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCC
Confidence 236899999999877554 2 667889888654
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=7e-07 Score=77.05 Aligned_cols=131 Identities=15% Similarity=0.083 Sum_probs=83.9
Q ss_pred EEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCe---eeecCCcc-------ccCCCCEEEEccC
Q 024494 88 LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI---TPSLKWTE-------ATQKFPYVIFCAP 151 (267)
Q Consensus 88 LV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v---~~d~~d~~-------~~~~~D~Vi~~a~ 151 (267)
||+|+ |.||++++++|+++ |++|++++|+++....+.. .++ ..|+.|++ ...++|.+||+++
T Consensus 1 lItGas~~iG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAE--GARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 58886 99999999999999 9999999998655433211 122 34555541 2346899999998
Q ss_pred CCCCCCh----HHHH-----------HHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 152 PSRSLDY----PGDV-----------RLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 152 ~~~~~~~----~~~~-----------~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
....... .+.. ..+.. ...+.+++|++||.+.|...+ + ...|+.+|.+.|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~-----------~--~~~Y~~sK~a~~ 145 (230)
T PRK07041 79 DTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSA-----------S--GVLQGAINAALE 145 (230)
T ss_pred CCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCC-----------c--chHHHHHHHHHH
Confidence 6432110 1111 11111 112467999999988875321 1 247999999998
Q ss_pred HHHHHcC-------eeEEeeCccccC
Q 024494 215 KVILEFG-------GCVLRLAGLYIS 233 (267)
Q Consensus 215 ~~l~~~~-------~~IlR~~~iyGp 233 (267)
.+.+... ++.++|+.+-.+
T Consensus 146 ~~~~~la~e~~~irv~~i~pg~~~t~ 171 (230)
T PRK07041 146 ALARGLALELAPVRVNTVSPGLVDTP 171 (230)
T ss_pred HHHHHHHHHhhCceEEEEeecccccH
Confidence 8776642 566777766443
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-06 Score=77.14 Aligned_cols=132 Identities=17% Similarity=0.130 Sum_probs=80.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-----------hhccC-----eeeecCCcc---------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMG-----ITPSLKWTE--------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-----------l~~~~-----v~~d~~d~~--------- 138 (267)
++++|+|+ |.||+++++.|.++ |++|++++|+.+.... +...+ +..|+.+++
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARD--GANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 67999996 99999999999999 9999999997643211 11111 234555541
Q ss_pred --ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCC
Q 024494 139 --ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDED 195 (267)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~ 195 (267)
...++|+|||+++...... +.. +...++ . ...+..++|++||..... .
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~---------~ 155 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD---------P 155 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc---------c
Confidence 2247999999998643211 111 111111 1 112346888888753211 0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCc
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAG 229 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~ 229 (267)
....+ ...|+.+|.+.|.+++.+ + +..+.|+.
T Consensus 156 ~~~~~--~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~ 196 (273)
T PRK08278 156 KWFAP--HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRT 196 (273)
T ss_pred cccCC--cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCC
Confidence 00011 357999999999887654 2 66778874
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.56 E-value=1e-06 Score=85.64 Aligned_cols=136 Identities=13% Similarity=0.113 Sum_probs=89.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|.++ |++|++++|+++..+.+.+ . .+..|+.|++ .....|+
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 346 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAA--GDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV 346 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999996 99999999999999 9999999998765544332 1 1345665541 2356899
Q ss_pred EEEccCCCCC-C---C-----hHH-------HHHHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 146 VIFCAPPSRS-L---D-----YPG-------DVRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 146 Vi~~a~~~~~-~---~-----~~~-------~~~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
+||+|+.... . + +.. +...+. +. ..+.+++|++||...+... | . ...
T Consensus 347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~~ 413 (520)
T PRK06484 347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL---------P--P--RNA 413 (520)
T ss_pred EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC---------C--C--Cch
Confidence 9999986421 1 1 111 111111 11 1234689999998765321 1 1 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|...+.+.+.. + +..+.|+.+..+.
T Consensus 414 Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 451 (520)
T PRK06484 414 YCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPA 451 (520)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCch
Confidence 999999988776543 2 7789999988764
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.2e-06 Score=75.49 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=79.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC----chh----hhccC-----eeeecCCcc-----------c
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDE----LINMG-----ITPSLKWTE-----------A 139 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~----~~~----l~~~~-----v~~d~~d~~-----------~ 139 (267)
+++||+|+ |.||.++++.|+++ |++|+.++++... .+. +...+ +..|+.|++ .
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~--G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQ--GAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHC--CCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 68999996 99999999999999 9998887764321 111 11111 234555431 2
Q ss_pred cCCCCEEEEccCCCCCC---C-----hHHH-------HHHHHHH---h-CCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSL---D-----YPGD-------VRLAALS---W-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---~-----~~~~-------~~~l~~~---~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
..++|+|||+|+..... + +... ...++.+ . ...+++++++|....... |
T Consensus 87 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------~ 154 (257)
T PRK12744 87 FGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------P 154 (257)
T ss_pred hCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------------C
Confidence 35789999999863221 1 1111 1111111 1 123567766433222110 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
. ...|+.+|.+.|.+.+.+ + +.+++|+.+..+
T Consensus 155 ~-~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~ 195 (257)
T PRK12744 155 F-YSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTP 195 (257)
T ss_pred C-cccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccc
Confidence 1 246889999999887654 2 788999999765
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-06 Score=75.05 Aligned_cols=136 Identities=11% Similarity=0.065 Sum_probs=85.1
Q ss_pred CCeEEEEcc-c-HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c-c------CeeeecCCcc-----------c
Q 024494 84 ENDLLIVGP-G-VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-M------GITPSLKWTE-----------A 139 (267)
Q Consensus 84 m~~ILV~Ga-G-~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~-~------~v~~d~~d~~-----------~ 139 (267)
.++++|+|+ | -||+.+++.|.++ |++|++++|+.++.+... . . .+..|+.+++ .
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEE--GARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 378999996 7 4999999999999 999999999865543221 1 1 1223554431 2
Q ss_pred cCCCCEEEEccCCCCCC---C-----hHHHH-------HHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSL---D-----YPGDV-------RLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---~-----~~~~~-------~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
...+|+|||+++..... + +.+.+ ..++ . ...+ ..++|++||...+-.. +
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~---------~ 165 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ---------H 165 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC---------C
Confidence 35789999999854221 1 11111 1111 1 1122 4688888885433110 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +..++|+.++.+.
T Consensus 166 --~--~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~ 207 (262)
T PRK07831 166 --G--QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF 207 (262)
T ss_pred --C--CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcc
Confidence 1 236889999888776543 2 7889999998874
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=2.4e-06 Score=74.18 Aligned_cols=130 Identities=15% Similarity=0.147 Sum_probs=81.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c---CeeeecCCcc--------ccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M---GITPSLKWTE--------ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~---~v~~d~~d~~--------~~~~~D~Vi~~a~ 151 (267)
||++|+|+ |.||++++++|.++ |++|+.++|+.++...+.+ . .+..|+.|++ ....+|++||+++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRND--GHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 47999996 99999999999999 9999999998765543321 1 2334555542 1136899999987
Q ss_pred CCC----CC-----ChHHHHHH-----------HH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 152 PSR----SL-----DYPGDVRL-----------AA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 152 ~~~----~~-----~~~~~~~~-----------l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+.. .. +..+..++ +. .. ....+++|++||.. . + . ...|+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~---------~--~--~~~Y~ 141 (223)
T PRK05884 79 PSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----P---------P--A--GSAEA 141 (223)
T ss_pred ccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----C---------C--C--ccccH
Confidence 421 00 00111111 10 11 11236899999854 0 1 1 23688
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.+|.+.+.+.+.. + +..+.|+.+..+
T Consensus 142 asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~ 176 (223)
T PRK05884 142 AIKAALSNWTAGQAAVFGTRGITINAVACGRSVQP 176 (223)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCch
Confidence 8998887765543 2 677888887654
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=4.2e-06 Score=74.93 Aligned_cols=147 Identities=12% Similarity=0.081 Sum_probs=83.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc----------ccCCCCE
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE----------ATQKFPY 145 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~----------~~~~~D~ 145 (267)
+.++|||+|.||++++++|. + |++|++++|++++..++ ...+ +..|+.|.+ ....+|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-A--GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 56788899999999999995 7 99999999986544322 1112 334665541 1256899
Q ss_pred EEEccCCCCCC-ChHH-------HHHHHH---HHh-CCCCcEEEEcCCccccCC-C----C---CccCCCC----CC-CC
Q 024494 146 VIFCAPPSRSL-DYPG-------DVRLAA---LSW-NGEGSFLFTSSSAIYDCS-D----N---GACDEDS----PV-VP 200 (267)
Q Consensus 146 Vi~~a~~~~~~-~~~~-------~~~~l~---~~~-~~v~r~V~~SS~~VYg~~-~----~---~~~~E~~----p~-~p 200 (267)
|||+|+..... ++.+ +...++ ... ...+++|++||....... . + ..++.+. +. .+
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQP 159 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccc
Confidence 99999965322 2111 111111 111 122456777776543211 0 0 0001000 00 00
Q ss_pred ----CCCCHHHHHHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 201 ----IGRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ----~~~~~y~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
.....|+.+|.+.+...+. + + +..+.|+.+..+-
T Consensus 160 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~ 206 (275)
T PRK06940 160 DAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPL 206 (275)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCcc
Confidence 0134799999988766543 2 2 6789999887663
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=98.45 E-value=4e-06 Score=76.64 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=49.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc----c--C---eeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN----M--G---ITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~----~--~---v~~d~~d~~-----------~~ 140 (267)
|.++++|||+ +-||.+++++|.++ | ++|+.++|+.++..++.. . . +..|+.|.+ ..
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~--G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAAT--GEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 3467999996 89999999999999 9 999999998665433211 1 1 234555431 23
Q ss_pred CCCCEEEEccCC
Q 024494 141 QKFPYVIFCAPP 152 (267)
Q Consensus 141 ~~~D~Vi~~a~~ 152 (267)
.+.|++||+||.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 579999999985
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.5e-06 Score=73.07 Aligned_cols=132 Identities=11% Similarity=0.098 Sum_probs=80.2
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchh----hhccC-----eeeecCCcc-----------ccCCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE----LINMG-----ITPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~----l~~~~-----v~~d~~d~~-----------~~~~~D 144 (267)
|||+|+ |.||.+++++|.++ |++|++++|+.+ .... +...+ +..|+.|.+ .....|
T Consensus 1 vlItGas~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAAD--GFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYY 78 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 589986 99999999999999 999999987543 2221 11111 233554431 234689
Q ss_pred EEEEccCCCCCC--------ChH-------HHHHHHHH-------HhCCCCcEEEEcCCc-cccCCCCCccCCCCCCCCC
Q 024494 145 YVIFCAPPSRSL--------DYP-------GDVRLAAL-------SWNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 145 ~Vi~~a~~~~~~--------~~~-------~~~~~l~~-------~~~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~ 201 (267)
.+||+++..... ++. .....++. ...+.+++|++||.. +|+.+.
T Consensus 79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~------------- 145 (239)
T TIGR01831 79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRG------------- 145 (239)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCC-------------
Confidence 999999853211 111 11111111 112456899999965 444211
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.+..+.
T Consensus 146 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (239)
T TIGR01831 146 -QVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186 (239)
T ss_pred -CcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCcccc
Confidence 135778887776554432 3 6779999998775
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=7.7e-06 Score=73.29 Aligned_cols=134 Identities=15% Similarity=0.085 Sum_probs=86.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCee-----eecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGIT-----PSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~-----~d~~d~~-----------~~ 140 (267)
++++++|||+ +-||..++++|.++ |++|+.+.|+.++..++.+ .+++ .|+.+++ ..
T Consensus 5 ~~~~~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 5 KGKTALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 4578999997 99999999999999 9999999999987765532 2333 3455441 12
Q ss_pred CCCCEEEEccCCCCCCCh-------HHHHH--H------H---H---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLDY-------PGDVR--L------A---A---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~-------~~~~~--~------l---~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
..+|++|++||......+ ...+. | + + ....+.+++|.++|.+-|-..
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~------------ 150 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT------------ 150 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC------------
Confidence 369999999997654321 11110 1 1 1 122356799999998876421
Q ss_pred CCCCCHHHHHHHHH----HHHH---HHcC--eeEEeeCccc
Q 024494 200 PIGRSPRTDVLLKA----EKVI---LEFG--GCVLRLAGLY 231 (267)
Q Consensus 200 p~~~~~y~~~k~~a----E~~l---~~~~--~~IlR~~~iy 231 (267)
|. ...|+.+|... |.+- ...+ ++.|=||.+.
T Consensus 151 p~-~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~ 190 (265)
T COG0300 151 PY-MAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTR 190 (265)
T ss_pred cc-hHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Confidence 21 24788888654 2222 2234 6777777654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=4.5e-06 Score=73.77 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=81.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhh----hc-cC-----eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----IN-MG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l----~~-~~-----v~~d~~d~~-----------~~ 140 (267)
.+++||||+ +.||++++++|.++ |++|+.+.|+ .+....+ .. .+ +..|+.|++ ..
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQS--GVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 378999996 99999999999999 9999888664 3222211 11 11 234555531 23
Q ss_pred CCCCEEEEccCCCC------CCCh----HHHHH---------------HHH--HHhCCCCcEEEEcCCccccCCCCCccC
Q 024494 141 QKFPYVIFCAPPSR------SLDY----PGDVR---------------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACD 193 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~------~~~~----~~~~~---------------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~ 193 (267)
.++|++||+|+... ...+ .+... .++ +...+.+++|++||...+-.
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------- 158 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVY------- 158 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccC-------
Confidence 57899999997431 0110 11111 111 11123468999999653211
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.|. ...|+.+|.+.|.+.+.+ + +..+.|+.+--+
T Consensus 159 --~~~----~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~ 201 (260)
T PRK08416 159 --IEN----YAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTD 201 (260)
T ss_pred --CCC----cccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCh
Confidence 011 236888999888776543 2 677889877544
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.38 E-value=3.2e-06 Score=80.98 Aligned_cols=150 Identities=17% Similarity=0.172 Sum_probs=94.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCch---hhhc------------c------C---eeeecCCc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD---ELIN------------M------G---ITPSLKWT 137 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~---~l~~------------~------~---v~~d~~d~ 137 (267)
-+.|+|||+ ||+|.-+++.|+...|+. +++.+-|.....+ .+.. . . +..|+.++
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 378999996 999999999999987665 6777777543221 1110 0 0 11122221
Q ss_pred ----------cccCCCCEEEEccCCCCCCC--------hHHHHHHHH---HHhCCCCcEEEEcCCccccCCCC----Cc-
Q 024494 138 ----------EATQKFPYVIFCAPPSRSLD--------YPGDVRLAA---LSWNGEGSFLFTSSSAIYDCSDN----GA- 191 (267)
Q Consensus 138 ----------~~~~~~D~Vi~~a~~~~~~~--------~~~~~~~l~---~~~~~v~r~V~~SS~~VYg~~~~----~~- 191 (267)
....++|+|||+|+..+.++ +..++++++ .+....+-+|++||..+. +... .+
T Consensus 92 ~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n-~~~~~i~E~~y 170 (467)
T KOG1221|consen 92 DLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN-CNVGHIEEKPY 170 (467)
T ss_pred ccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee-ccccccccccc
Confidence 13568899999999876654 333444443 233467899999998775 2210 00
Q ss_pred -------------cCCCC---------C-CCCCCCCHHHHHHHHHHHHHHHcC----eeEEeeCccccCC
Q 024494 192 -------------CDEDS---------P-VVPIGRSPRTDVLLKAEKVILEFG----GCVLRLAGLYISL 234 (267)
Q Consensus 192 -------------~~E~~---------p-~~p~~~~~y~~~k~~aE~~l~~~~----~~IlR~~~iyGp~ 234 (267)
.+|+. | ....-.+.|.-+|+.+|..+.+.. .+|+||+.|....
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~ 240 (467)
T KOG1221|consen 171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTY 240 (467)
T ss_pred CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccc
Confidence 11111 1 001002567778999999998864 8999999998886
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=8.8e-06 Score=71.68 Aligned_cols=135 Identities=16% Similarity=0.119 Sum_probs=83.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-C-----eeeecCCcc-------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-G-----ITPSLKWTE-------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-~-----v~~d~~d~~-------~~~~~D~V 146 (267)
++++|+|+ |.||+++++.|.++ |++|++++|++++...+. .. + +..|+.|++ ....+|++
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAE--GCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 78999996 99999999999999 999999999876543321 11 1 223555542 34679999
Q ss_pred EEccCCCCCC---C-----hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSL---D-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~---~-----~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+++..... + +... ...+. +...+.+++|++||..-.. +... +..
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~-----------~~~~--~~~ 152 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGEN-----------PDAD--YIC 152 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccC-----------CCCC--chH
Confidence 9999854321 1 1111 11111 1122346899998854321 1111 346
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|..+|...+.+.+.. + +..+.|+.+..+.
T Consensus 153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~ 190 (259)
T PRK06125 153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDR 190 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHH
Confidence 777888777665542 3 7789998887653
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.35 E-value=7.5e-06 Score=75.29 Aligned_cols=136 Identities=13% Similarity=0.058 Sum_probs=84.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--C-----eeeecCC--c-------cccC--
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--G-----ITPSLKW--T-------EATQ-- 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--~-----v~~d~~d--~-------~~~~-- 141 (267)
+.++|||+ |.||++++++|.++ |++|+.++|++++.+++.+ . + +..|+.+ . +...
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~--G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARK--GLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 67999996 99999999999999 9999999998776543311 1 1 1234432 1 1223
Q ss_pred CCCEEEEccCCCCC-----CC-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRS-----LD-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~-----~~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+.|++||+||.... .+ +.+ +...+. + ...+.+++|++||...+..+ .
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~----------~ 201 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP----------S 201 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------C
Confidence 45699999986421 11 111 111111 1 12356799999997764211 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.|. ...|+.+|...+.+.+.. + +..+.|+.+-.+
T Consensus 202 ~p~-~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~ 244 (320)
T PLN02780 202 DPL-YAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATK 244 (320)
T ss_pred Ccc-chHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecC
Confidence 121 357999999888765442 3 677888887554
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.9e-05 Score=66.84 Aligned_cols=124 Identities=19% Similarity=0.188 Sum_probs=77.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-------ccCCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-------ATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-------~~~~~D~Vi~~a~~~~~~ 156 (267)
|+++|+|+ |.||++++++|.++ ++|++++|++. .+..|+.|++ ...++|+|||+++.....
T Consensus 1 ~~vlItGas~giG~~la~~l~~~---~~vi~~~r~~~--------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 69 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR---HEVITAGRSSG--------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHFA 69 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc---CcEEEEecCCC--------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 47999996 99999999999876 78999999754 2345555531 235799999999854321
Q ss_pred C--------hHHH-------HHHHHH---H-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024494 157 D--------YPGD-------VRLAAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (267)
Q Consensus 157 ~--------~~~~-------~~~l~~---~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l 217 (267)
. +.+. ..++.. . ..+..+++++||..... +. |. ...|+.+|...+.+.
T Consensus 70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~-----------~~-~~-~~~Y~~sK~a~~~~~ 136 (199)
T PRK07578 70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDE-----------PI-PG-GASAATVNGALEGFV 136 (199)
T ss_pred chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCC-----------CC-CC-chHHHHHHHHHHHHH
Confidence 1 1111 111111 1 12346799998755321 11 11 247888888777665
Q ss_pred HHc------C--eeEEeeCcccc
Q 024494 218 LEF------G--GCVLRLAGLYI 232 (267)
Q Consensus 218 ~~~------~--~~IlR~~~iyG 232 (267)
+.. + +..+.|+.+-.
T Consensus 137 ~~la~e~~~gi~v~~i~Pg~v~t 159 (199)
T PRK07578 137 KAAALELPRGIRINVVSPTVLTE 159 (199)
T ss_pred HHHHHHccCCeEEEEEcCCcccC
Confidence 432 3 56678877643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.33 E-value=9e-06 Score=78.99 Aligned_cols=135 Identities=16% Similarity=0.187 Sum_probs=86.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC-----eeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG-----ITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~-----v~~d~~d~~-----------~~~~~D~V 146 (267)
+.+||||+ +.||.+++++|.++ |++|+.++|+.+...++.. .+ +..|+.|++ ...++|++
T Consensus 6 k~~lITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARA--GDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 67999996 89999999999999 9999999998776544322 12 345665541 23579999
Q ss_pred EEccCCCCC-----CC-----hHHH-------HHHHH---H---HhCCC-CcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 147 IFCAPPSRS-----LD-----YPGD-------VRLAA---L---SWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 147 i~~a~~~~~-----~~-----~~~~-------~~~l~---~---~~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
||+|+.... .+ +... ...+. . ...+. .++|++||....... | .
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~------------~-~ 150 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL------------P-K 150 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC------------C-C
Confidence 999986210 11 1111 11111 1 11233 489999987654321 1 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.. + ++.+.|+.+..+.
T Consensus 151 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 151 RTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 246889999888765542 2 6788998876553
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.8e-05 Score=64.18 Aligned_cols=130 Identities=14% Similarity=0.035 Sum_probs=77.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchh-------hhccC-----eeeecCCcc-----------c
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE-------LINMG-----ITPSLKWTE-----------A 139 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~-------l~~~~-----v~~d~~d~~-----------~ 139 (267)
++++|+|+ |.||.+++++|.++ |+ .|+.++|+++.... +...+ +..|+.+.+ .
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAER--GARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPAR 78 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHh--hCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 36899985 99999999999998 86 68888887554321 11112 223444431 1
Q ss_pred cCCCCEEEEccCCCCCC--------Ch-------HHHHHHHHHH--hCCCCcEEEEcCCcc-ccCCCCCccCCCCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSL--------DY-------PGDVRLAALS--WNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--------~~-------~~~~~~l~~~--~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~p~ 201 (267)
....|.|||+++..... ++ ......++.. ..+.+++|++||... |+.. .
T Consensus 79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~------------~- 145 (180)
T smart00822 79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNP------------G- 145 (180)
T ss_pred cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCC------------C-
Confidence 24579999999854321 01 1112222221 124678999988654 3321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc---C--eeEEeeCcc
Q 024494 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGL 230 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~---~--~~IlR~~~i 230 (267)
...|+.+|...+.+++.. + ++.+.++.+
T Consensus 146 -~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 146 -QANYAAANAFLDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred -chhhHHHHHHHHHHHHHHHhcCCceEEEeeccc
Confidence 236888898888877543 2 566666543
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.3e-05 Score=70.58 Aligned_cols=131 Identities=12% Similarity=0.074 Sum_probs=84.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC------eeeecCCc-----------cccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG------ITPSLKWT-----------EATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~------v~~d~~d~-----------~~~~~~D~ 145 (267)
|.++|||+ .-||.+++++|.++ |++|+...|+.++.+++.. .+ ...|++|. +...+.|+
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~--G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 7 KVALITGASSGIGEATARALAEA--GAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHC--CCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 56899997 78999999999999 9999999999988876643 22 12356664 24568999
Q ss_pred EEEccCCCCCCC--------h-------HHHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------Y-------PGDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~-------~~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
+||-||....+. | +.++.+.. +...+.+++|.+||++--- ..|. .+
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~---------~y~~----~~ 151 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRY---------PYPG----GA 151 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccc---------cCCC----Cc
Confidence 999999654321 1 12222211 1223456999999986210 1111 13
Q ss_pred HHHHHHHHHHHHHHH----cC-----eeEEeeCcc
Q 024494 205 PRTDVLLKAEKVILE----FG-----GCVLRLAGL 230 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~----~~-----~~IlR~~~i 230 (267)
.|+.+|.....+-+. .. ++.+-|+.+
T Consensus 152 vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v 186 (246)
T COG4221 152 VYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLV 186 (246)
T ss_pred cchhhHHHHHHHHHHHHHHhcCCCeeEEEecCcee
Confidence 688888776655332 21 566666665
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.2e-05 Score=76.94 Aligned_cols=134 Identities=11% Similarity=0.090 Sum_probs=82.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhh-cc---CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI-NM---GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~-~~---~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||..++++|.++ |++|++++|.... ..++. .. .+..|+.|.+ ...++|+
T Consensus 210 g~~vlItGasggIG~~la~~l~~~--Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARD--GAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 378999996 99999999999999 9999999885322 11221 11 2345665541 2346899
Q ss_pred EEEccCCCCCCC--------hHH-------HHHHHHH---H---hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPG-------DVRLAAL---S---WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~~~l~~---~---~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+++...... +.. +..++.. . ....++||++||...+.... ...
T Consensus 288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~-------------~~~ 354 (450)
T PRK08261 288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNR-------------GQT 354 (450)
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCC-------------CCh
Confidence 999999653211 111 1111111 1 11237899999976442111 024
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCcccc
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYI 232 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyG 232 (267)
.|+.+|...+.+++.+ + ...+.|+.+--
T Consensus 355 ~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t 391 (450)
T PRK08261 355 NYAASKAGVIGLVQALAPLLAERGITINAVAPGFIET 391 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcc
Confidence 6888998776665443 2 67788887643
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.1e-05 Score=69.33 Aligned_cols=134 Identities=10% Similarity=0.064 Sum_probs=82.4
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCc-----------cccCCCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~-----------~~~~~~D 144 (267)
+.++|||+ +-||+.++++|.++ |++|+..+|+......+.+ ..+.+|+.|+ +.....|
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQ--GATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 67999996 37999999999999 9999999887322111111 1234466554 1235799
Q ss_pred EEEEccCCCCC----C---C-----hHHH-------HHHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 145 YVIFCAPPSRS----L---D-----YPGD-------VRLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 145 ~Vi~~a~~~~~----~---~-----~~~~-------~~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
++||+|+.... . + +... ...+. .. ....+++|++||.+.... .|.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~------------~~~ 153 (252)
T PRK06079 86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA------------IPN 153 (252)
T ss_pred EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc------------CCc
Confidence 99999985421 1 1 1111 01111 11 112368999998653211 011
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+..|+.+|...+.+.+.. + +..+.|+.+-.+
T Consensus 154 -~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~ 193 (252)
T PRK06079 154 -YNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTL 193 (252)
T ss_pred -chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccc
Confidence 357899999888776543 2 678999988655
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.5e-05 Score=70.73 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=46.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhh----hc-c-----CeeeecCCcc--------------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDEL----IN-M-----GITPSLKWTE-------------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l----~~-~-----~v~~d~~d~~-------------- 138 (267)
+.++|||+ |.||++++++|.++ |++|+++.|+ ++....+ .. . .+..|+.|.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQE--GYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhC--CCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 46899996 89999999999999 9999998764 3333221 11 0 1344665542
Q ss_pred -ccCCCCEEEEccCC
Q 024494 139 -ATQKFPYVIFCAPP 152 (267)
Q Consensus 139 -~~~~~D~Vi~~a~~ 152 (267)
...++|+|||+|+.
T Consensus 80 ~~~g~iD~lv~nAG~ 94 (267)
T TIGR02685 80 RAFGRCDVLVNNASA 94 (267)
T ss_pred HccCCceEEEECCcc
Confidence 23579999999985
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=3e-05 Score=67.13 Aligned_cols=69 Identities=17% Similarity=0.198 Sum_probs=46.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCc-------cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-------EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~-------~~~~~~D~Vi~~a~~~ 153 (267)
|+++|+|+ |.||++++++|.++.+++.|....|+......... ..+..|+.|. +.+.+.|+|||++|..
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~~ 78 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGML 78 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCccc
Confidence 58999996 99999999999998334677766665432210000 1234566554 2356899999999964
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=3e-05 Score=68.36 Aligned_cols=136 Identities=14% Similarity=0.110 Sum_probs=81.7
Q ss_pred CCeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCC---------C--c----hhhhccC-----eeeecCCc---
Q 024494 84 ENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD---------H--H----DELINMG-----ITPSLKWT--- 137 (267)
Q Consensus 84 m~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~---------~--~----~~l~~~~-----v~~d~~d~--- 137 (267)
.+++||||+ | -||++++++|+++ |++|+.+.|+.. . . .++...+ +..|+.|.
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~--G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEA--GADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 478999996 4 6999999999999 999998754210 0 0 1111112 23355443
Q ss_pred --------cccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCC
Q 024494 138 --------EATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSD 188 (267)
Q Consensus 138 --------~~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~ 188 (267)
+.....|+|||+++...... +.... +.++ ....+.++||++||...+..
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-- 161 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP-- 161 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC--
Confidence 12346899999998543211 11100 0111 11123569999999764321
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
... ...|+.+|.+.+.+.+.. + ++.++|+.+-.+.
T Consensus 162 ---------~~~--~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~ 205 (256)
T PRK12859 162 ---------MVG--ELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGW 205 (256)
T ss_pred ---------CCC--chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCC
Confidence 111 347999998888775543 2 7789999987653
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.2e-05 Score=70.42 Aligned_cols=69 Identities=14% Similarity=0.184 Sum_probs=48.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchh----hhccC-----eeeecCCcc----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE----LINMG-----ITPSLKWTE----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~----l~~~~-----v~~d~~d~~----------~~~~ 142 (267)
.++++|||+ |.||++++++|+++ |++|++.+++.. ..+. +...+ +..|+.|++ ...+
T Consensus 12 ~k~~lVTGas~gIG~~ia~~L~~~--Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 12 GKVAVVTGAAAGLGRAEALGLARL--GATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 378999996 99999999999999 999999987532 2222 21112 233454431 1357
Q ss_pred CCEEEEccCCCC
Q 024494 143 FPYVIFCAPPSR 154 (267)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (267)
+|+|||+|+...
T Consensus 90 iD~li~nAG~~~ 101 (306)
T PRK07792 90 LDIVVNNAGITR 101 (306)
T ss_pred CCEEEECCCCCC
Confidence 899999998643
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.21 E-value=1.1e-06 Score=73.04 Aligned_cols=68 Identities=19% Similarity=0.317 Sum_probs=53.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
||+|.|+|.|-+|+.++++|.++ ||+|++++|++++.+.+.+.++...-...+..+++|+||.|.+..
T Consensus 1 m~~Ig~IGlG~mG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~ 68 (163)
T PF03446_consen 1 MMKIGFIGLGNMGSAMARNLAKA--GYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDD 68 (163)
T ss_dssp -BEEEEE--SHHHHHHHHHHHHT--TTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSH
T ss_pred CCEEEEEchHHHHHHHHHHHHhc--CCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccc
Confidence 78999999999999999999999 999999999998888777667555433335677889999998654
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=3.2e-05 Score=67.45 Aligned_cols=132 Identities=9% Similarity=-0.028 Sum_probs=82.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCc-----------cccC-C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWT-----------EATQ-K 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~-----------~~~~-~ 142 (267)
++++|+|+ +-||++++++|.++ |++|+.++|++++.+++. ..+ +..|+.|+ +.+. .
T Consensus 6 k~~lVtGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARL--GATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 68999997 78999999999999 999999999877654332 112 22344443 1234 7
Q ss_pred CCEEEEccCCCCC----C-----ChHHHHH-----------HHH--HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L-----DYPGDVR-----------LAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~-----~~~~~~~-----------~l~--~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+++.... . ++.+.+. .++ +...+ .+.+|++||...+ +
T Consensus 84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~------------~-- 149 (227)
T PRK08862 84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH------------Q-- 149 (227)
T ss_pred CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC------------C--
Confidence 9999999973211 1 1221111 011 11122 4689999985422 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|...+.+.+.. + +..+.|+.+-.+.
T Consensus 150 ~--~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 150 D--LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred C--cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 1 235888888877665432 3 6788999887764
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.20 E-value=2e-06 Score=80.89 Aligned_cols=69 Identities=20% Similarity=0.328 Sum_probs=55.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhcc---Ce---eeecCCc----cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM---GI---TPSLKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~---~v---~~d~~d~----~~~~~~D~Vi~~a~~ 152 (267)
||+|||+|+|.||+.++..|.++ + .+|++.+|+.++..++... .+ ..|+.|. +.+.+.|+||+|+++
T Consensus 1 m~~ilviGaG~Vg~~va~~la~~--~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGAGGVGSVVAHKLAQN--GDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECCchhHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 69999999999999999999999 7 8999999998877665432 23 3455554 467888999999987
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 79 ~~ 80 (389)
T COG1748 79 FV 80 (389)
T ss_pred hh
Confidence 64
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.19 E-value=3e-06 Score=73.86 Aligned_cols=134 Identities=14% Similarity=0.082 Sum_probs=88.9
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--CeeeecCC-------ccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKW-------TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--~v~~d~~d-------~~~~~~~D~Vi~~a~~~~ 154 (267)
.++++.| -|+.|.++++..... ++.|..+.|+..+. .+..+ .+.|...| .+.+.++..|+-|++-..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~v--v~svgilsen~~k~-~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfg 129 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNV--VHSVGILSENENKQ-TLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFG 129 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhh--ceeeeEeecccCcc-hhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCcc
Confidence 4567776 599999999999999 99999999986532 11111 23332221 245677888888887654
Q ss_pred CCChHHHHH-----HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-C--eeE
Q 024494 155 SLDYPGDVR-----LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCV 224 (267)
Q Consensus 155 ~~~~~~~~~-----~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-~--~~I 224 (267)
...+.+.+. +.. .+..++++|+|+|.-. ||-. |..| ..|-+.|.++|..+... . .+|
T Consensus 130 n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d-~~~~---------~~i~---rGY~~gKR~AE~Ell~~~~~rgii 196 (283)
T KOG4288|consen 130 NIILMDRINGTANINAVKAAAKAGVPRFVYISAHD-FGLP---------PLIP---RGYIEGKREAEAELLKKFRFRGII 196 (283)
T ss_pred chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh-cCCC---------Cccc---hhhhccchHHHHHHHHhcCCCcee
Confidence 433322221 221 2346899999999533 3321 2233 36778999999887763 3 899
Q ss_pred EeeCccccCC
Q 024494 225 LRLAGLYISL 234 (267)
Q Consensus 225 lR~~~iyGp~ 234 (267)
||||.+||..
T Consensus 197 lRPGFiyg~R 206 (283)
T KOG4288|consen 197 LRPGFIYGTR 206 (283)
T ss_pred eccceeeccc
Confidence 9999999996
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=2.8e-05 Score=73.97 Aligned_cols=69 Identities=16% Similarity=0.214 Sum_probs=51.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-c-----cCeeeecCCcc----ccCCCCEEEEccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-N-----MGITPSLKWTE----ATQKFPYVIFCAP 151 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-~-----~~v~~d~~d~~----~~~~~D~Vi~~a~ 151 (267)
.+++++|||+ |.||++++++|.++ |++|++++|++++..... . ..+.+|+.|.+ .+.++|++||+||
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~--G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAG 254 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQ--GAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHG 254 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCC
Confidence 3478999996 99999999999999 999999999865543211 1 12345666652 4578999999998
Q ss_pred CC
Q 024494 152 PS 153 (267)
Q Consensus 152 ~~ 153 (267)
..
T Consensus 255 i~ 256 (406)
T PRK07424 255 IN 256 (406)
T ss_pred cC
Confidence 64
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=4.5e-05 Score=67.43 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=49.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhhhc---cCeeeecCCc----cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELIN---MGITPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l~~---~~v~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
++++|||+ |.||++++++|+++ |++|++++|++. ....... ..+..|+.|. +.+.++|++||+||..
T Consensus 15 k~~lITGas~gIG~ala~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~ 90 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAK--GAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN 90 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence 78999996 99999999999999 999999999762 2111111 1234566654 2456899999999864
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=3e-05 Score=68.16 Aligned_cols=133 Identities=11% Similarity=-0.021 Sum_probs=81.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC------eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG------ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~------v~~d~~d~-----------~~~~~ 142 (267)
|.++|+|+ +-||++++++|. + |++|+.++|++++.+++. ..+ +.+|+.|+ +...+
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~--g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-H--GEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-C--CCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 57899996 889999999997 7 899999999876654331 111 23455553 12357
Q ss_pred CCEEEEccCCCCCC---C-----hHHHH-------HH---HH---HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPGDV-------RL---AA---LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-------~~---l~---~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.|++||+++..... + +.+.. .. .+ +...+ .+++|++||...+-.. |.
T Consensus 78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~---------~~-- 146 (246)
T PRK05599 78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR---------RA-- 146 (246)
T ss_pred CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---------cC--
Confidence 89999999864221 1 11100 00 10 11122 4689999997543211 11
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|...+.+.+.. + +..+-|+.+..+
T Consensus 147 --~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~ 186 (246)
T PRK05599 147 --NYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGS 186 (246)
T ss_pred --CcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccch
Confidence 236888888777655432 2 566788887554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.11 E-value=5.6e-05 Score=67.61 Aligned_cols=134 Identities=13% Similarity=0.067 Sum_probs=81.8
Q ss_pred CeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCCCc---hhhhc-cC----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELIN-MG----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~~~---~~l~~-~~----v~~d~~d~-----------~~~~~ 142 (267)
+.+||||+ + -||+.++++|.++ |++|+..+|+.... .++.. .+ +..|+.|+ +....
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQ--GAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhC--CCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 56999997 4 7999999999999 99999998874322 12211 12 34566654 13467
Q ss_pred CCEEEEccCCCCC----CC--------hHHHHH-------HHHH---H-hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----LD--------YPGDVR-------LAAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~~--------~~~~~~-------~l~~---~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+|+.... .. +.+.+. .+.. . ....+++|++||...... .
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~---------~--- 153 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV---------M--- 153 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc---------C---
Confidence 9999999985421 11 111110 1111 1 112368999998653211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. +..|+.+|.+.+.+.+.. + +..+.|+.+-.+
T Consensus 154 ~~-~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 154 PN-YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred Cc-cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccc
Confidence 11 346888998887665542 2 677889888654
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.09 E-value=5.1e-05 Score=67.18 Aligned_cols=134 Identities=11% Similarity=0.066 Sum_probs=81.3
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCCC------chhhhcc-----CeeeecCCc-----------cc
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADH------HDELINM-----GITPSLKWT-----------EA 139 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~~------~~~l~~~-----~v~~d~~d~-----------~~ 139 (267)
+.++|||+ +-||++++++|.++ |++|+...|+.+. ..++... .+..|+.|+ +.
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAA--GAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHC--CCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 67999996 47999999999999 9999887664332 1122111 233455554 12
Q ss_pred cCCCCEEEEccCCCCC----CC--------hHHH-----------HHHHHHHhCCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 140 TQKFPYVIFCAPPSRS----LD--------YPGD-----------VRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~~--------~~~~-----------~~~l~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
....|++||+|+.... .. +.+. .+.++......+++|++||..-...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~---------- 154 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA---------- 154 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC----------
Confidence 3579999999985421 11 1111 0111101112368999998653211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
. |. ...|+.+|.+.+.+.+.. + +..+.|+.+-.+
T Consensus 155 -~-~~-~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 155 -I-PN-YNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred -C-cc-cchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCc
Confidence 1 11 346999999888776543 2 677999988655
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=3.2e-05 Score=71.35 Aligned_cols=107 Identities=12% Similarity=0.084 Sum_probs=68.8
Q ss_pred CCCCCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--hhhcc--Ceee-ecCC----ccccCCCCEEEE
Q 024494 79 SGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM--GITP-SLKW----TEATQKFPYVIF 148 (267)
Q Consensus 79 ~~~~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--~l~~~--~v~~-d~~d----~~~~~~~D~Vi~ 148 (267)
+....|+||+|+|+ |.||+.++..|..+.-..++..+|+...... ++... .... +..| .+.++++|+||+
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVi 82 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLI 82 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEE
Confidence 34567889999998 9999999999986511368999998322211 11111 1111 2223 357899999999
Q ss_pred ccCCCCCC-C--------hHHHHHHHHH--HhCCCCcEEEEcCCcccc
Q 024494 149 CAPPSRSL-D--------YPGDVRLAAL--SWNGEGSFLFTSSSAIYD 185 (267)
Q Consensus 149 ~a~~~~~~-~--------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg 185 (267)
++|..... . +.+.+++++. ...+++++|+++|..+-.
T Consensus 83 taG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv 130 (321)
T PTZ00325 83 CAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNS 130 (321)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHH
Confidence 99975432 1 2233444442 335889999999977643
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=9.1e-05 Score=65.59 Aligned_cols=134 Identities=10% Similarity=0.010 Sum_probs=81.2
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhc----c---CeeeecCCc-----------ccc
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN----M---GITPSLKWT-----------EAT 140 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~----~---~v~~d~~d~-----------~~~ 140 (267)
+.++|||+ +-||++++++|.++ |++|+...|+.. ..+++.. . .+..|+.|+ +..
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNA--GAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 67999996 58999999999999 999999887532 2222211 1 123455554 134
Q ss_pred CCCCEEEEccCCCCC----C---C-----hHHHH-------HHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 QKFPYVIFCAPPSRS----L---D-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~---~-----~~~~~-------~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.+.|++||+|+.... . + +...+ ..+. .. .....++|++||....- +
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~-----------~ 154 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGER-----------V 154 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCcc-----------C
Confidence 678999999985321 1 1 11111 0111 11 11236899999865321 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
. |. ...|+.+|.+.+.+.+.. + +..+.|+.+-.+
T Consensus 155 ~-~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 155 V-QN-YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred C-CC-CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCH
Confidence 0 11 246889999888776543 2 677888887654
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=9.5e-05 Score=65.41 Aligned_cols=134 Identities=14% Similarity=0.098 Sum_probs=81.0
Q ss_pred CeEEEEccc---HHhHHHHHHHHhcCCCCeEEEEeCCCCCc---hhhhc-----cCeeeecCCc-----------cccCC
Q 024494 85 NDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTADHH---DELIN-----MGITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~GaG---~IG~~La~~L~~~~pG~~V~~l~R~~~~~---~~l~~-----~~v~~d~~d~-----------~~~~~ 142 (267)
+.+||||++ -||++++++|+++ |++|+..+|+.+.. .++.. ..+.+|+.|. +....
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRAL--GAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 679999953 7999999999999 99999999875432 22211 1234566553 12357
Q ss_pred CCEEEEccCCCCC----C---C-----hHHHHH-------HHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPGDVR-------LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~~~~-------~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+|+.... . + +.+.+. .+. .. .....++|++||.+... + .
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~-----------~-~ 156 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK-----------V-V 156 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-----------C-C
Confidence 8999999985421 0 1 111111 111 11 11236899998864321 0 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. +..|+.+|.+.+.+.+.. + +..+.|+.+-.+
T Consensus 157 ~~-~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~ 198 (258)
T PRK07533 157 EN-YNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTR 198 (258)
T ss_pred cc-chhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCCh
Confidence 11 346888998887665442 2 677888887554
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.06 E-value=8.1e-05 Score=66.58 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=80.8
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhc-cC----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-MG----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~-~~----v~~d~~d~-----------~~~~~ 142 (267)
+.+||+|+ +-||.+++++|.++ |++|+...|+.. ...++.. .+ +..|+.|+ +....
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~--G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAA--GAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 67999996 57999999999999 999998877632 2222211 12 34455553 12457
Q ss_pred CCEEEEccCCCCC----C---C-----hHHHHH-------HHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPGDVR-------LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~~~~-------~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+|+.... . + +...+. .+. .. ..+.+++|++||.+.+.. .
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~------------~ 156 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV------------M 156 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC------------C
Confidence 8999999985421 1 1 111111 111 11 113468999998653211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. +..|+.+|.+.+.+.+.. + +..+.|+.+..+
T Consensus 157 p~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 198 (272)
T PRK08159 157 PH-YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTL 198 (272)
T ss_pred Cc-chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCH
Confidence 21 346889998887766543 2 667888887543
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=4.4e-05 Score=66.86 Aligned_cols=130 Identities=13% Similarity=0.005 Sum_probs=78.6
Q ss_pred HHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc--------ccCCCCEEEEccCCCCCCChHH-------HHH
Q 024494 99 VAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE--------ATQKFPYVIFCAPPSRSLDYPG-------DVR 163 (267)
Q Consensus 99 La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~--------~~~~~D~Vi~~a~~~~~~~~~~-------~~~ 163 (267)
++++|.++ |++|++++|+.++.. +. ..+..|+.|.+ ...++|+|||+|+.....++.. +..
T Consensus 1 ~a~~l~~~--G~~Vv~~~r~~~~~~-~~-~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~~ 76 (241)
T PRK12428 1 TARLLRFL--GARVIGVDRREPGMT-LD-GFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGLR 76 (241)
T ss_pred ChHHHHhC--CCEEEEEeCCcchhh-hh-HhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHHH
Confidence 47889999 999999999876542 11 23455665541 1246899999999654332211 111
Q ss_pred HHH---HH-hCCCCcEEEEcCCccccCCCCCccCCC----------------CCCCCCCCCHHHHHHHHHHHHHH-----
Q 024494 164 LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDED----------------SPVVPIGRSPRTDVLLKAEKVIL----- 218 (267)
Q Consensus 164 ~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~----------------~p~~p~~~~~y~~~k~~aE~~l~----- 218 (267)
.+. .. ....+++|++||...|+.....+..|. .|. + ....|+.+|...|.+.+
T Consensus 77 ~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~Y~~sK~a~~~~~~~la~~ 154 (241)
T PRK12428 77 HLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPV-A-LATGYQLSKEALILWTMRQAQP 154 (241)
T ss_pred HHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCC-C-cccHHHHHHHHHHHHHHHHHHH
Confidence 121 11 112379999999998864321111110 122 1 13589999998875532
Q ss_pred Hc---C--eeEEeeCccccCC
Q 024494 219 EF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 219 ~~---~--~~IlR~~~iyGp~ 234 (267)
++ + +..++|+.+.++-
T Consensus 155 e~~~~girvn~v~PG~v~T~~ 175 (241)
T PRK12428 155 WFGARGIRVNCVAPGPVFTPI 175 (241)
T ss_pred hhhccCeEEEEeecCCccCcc
Confidence 22 3 7889999998874
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00012 Score=66.00 Aligned_cols=67 Identities=15% Similarity=0.194 Sum_probs=47.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC---------CCchh----hhccC-----eeeecCCc--------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---------DHHDE----LINMG-----ITPSLKWT-------- 137 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~---------~~~~~----l~~~~-----v~~d~~d~-------- 137 (267)
+++||||+ +-||++++++|.++ |++|+.++|+. +.... +...+ +..|+.|.
T Consensus 7 k~~lITGas~GIG~aia~~la~~--G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 67999996 99999999999999 99999998764 22222 11111 23455553
Q ss_pred ---cccCCCCEEEEccCCC
Q 024494 138 ---EATQKFPYVIFCAPPS 153 (267)
Q Consensus 138 ---~~~~~~D~Vi~~a~~~ 153 (267)
+.....|++||+|+..
T Consensus 85 ~~~~~~g~id~lv~nAG~~ 103 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGIL 103 (286)
T ss_pred HHHHhcCCCCEEEECCCCC
Confidence 1246789999999864
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00012 Score=65.57 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=81.2
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhc-----cCeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-----MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~-----~~v~~d~~d~~-----------~~~~ 142 (267)
+.+||||+ +-||++++++|.++ |++|+..+|+.. ...++.. ..+..|+.|.+ ...+
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~--G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQ--GAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 47999999999999 999999988742 2222211 12345666641 2467
Q ss_pred CCEEEEccCCCCC----C---C-----hHHHH-------HHHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPGDV-------RLAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~~~-------~~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+|+.... . + +...+ ..+. .. ....+++|++||.+-... .
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~------------~ 151 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY------------V 151 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC------------C
Confidence 8999999985321 1 1 11111 0111 11 112368999998643211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. +..|+.+|.+.+.+.+.. + +..+-|+.+..+
T Consensus 152 ~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 152 PH-YNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred Cc-chhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccH
Confidence 11 246888998877665442 2 567888887654
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=0.00014 Score=63.17 Aligned_cols=120 Identities=18% Similarity=0.179 Sum_probs=78.4
Q ss_pred CeEEEEcc--cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-ccCeee---ecCCcc------------ccCCCCEE
Q 024494 85 NDLLIVGP--GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITP---SLKWTE------------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga--G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-~~~v~~---d~~d~~------------~~~~~D~V 146 (267)
++|||+|| |-||.+|++++.++ |++|+++.|+-+...+|. +.|+.+ |+.+++ ...+.|++
T Consensus 8 k~VlItgcs~GGIG~ala~ef~~~--G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 8 KKVLITGCSSGGIGYALAKEFARN--GYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CeEEEeecCCcchhHHHHHHHHhC--CeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 78999995 99999999999999 999999999988877775 445433 444431 23468999
Q ss_pred EEccCCCCC----CChHHHHHHHH-----------HH-----hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 147 IFCAPPSRS----LDYPGDVRLAA-----------LS-----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 147 i~~a~~~~~----~~~~~~~~~l~-----------~~-----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
++-||..=. +.-...+.+.. .+ ....+.+|++.|..+|-.- |. .+.|
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf------------pf-~~iY 152 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF------------PF-GSIY 152 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc------------ch-hhhh
Confidence 999885421 11111111110 00 0134689999999887531 22 1467
Q ss_pred HHHHHHHHHHHHH
Q 024494 207 TDVLLKAEKVILE 219 (267)
Q Consensus 207 ~~~k~~aE~~l~~ 219 (267)
..+|++.-.+.+.
T Consensus 153 sAsKAAihay~~t 165 (289)
T KOG1209|consen 153 SASKAAIHAYART 165 (289)
T ss_pred hHHHHHHHHhhhh
Confidence 7888766655443
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00018 Score=64.13 Aligned_cols=134 Identities=12% Similarity=0.036 Sum_probs=79.9
Q ss_pred CeEEEEccc---HHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhcc-----CeeeecCCc-----------cccCC
Q 024494 85 NDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-----GITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~GaG---~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~~-----~v~~d~~d~-----------~~~~~ 142 (267)
+.++|||++ -||++++++|.++ |++|+..+|+.. ..+++... .+..|+.|+ +....
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~--G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHC--CCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 679999974 6999999999999 999998888732 12222211 234566554 12356
Q ss_pred CCEEEEccCCCCCC--------C-----hHHHHH-------HHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRSL--------D-----YPGDVR-------LAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~-----~~~~~~-------~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.|++||+|+..... + +...+. .+. ... ....++|++||.+.+. +.
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~-----------~~ 153 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER-----------AI 153 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC-----------CC
Confidence 89999999853210 0 111000 010 111 1236899999865321 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. +..|+.+|.+.+.+.+.. + +..+-|+.+--+
T Consensus 154 -~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (262)
T PRK07984 154 -PN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 195 (262)
T ss_pred -CC-cchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccch
Confidence 11 246999999888776543 2 566778777443
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=1e-05 Score=73.32 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=53.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||+|.|+|+|.+|+.+++.|.+. |++|++++|++++...+...++...-...+...++|+||.|.+..
T Consensus 1 ~~~~IgviG~G~mG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~g~~~~~~~~e~~~~~d~vi~~vp~~ 69 (296)
T PRK11559 1 MTMKVGFIGLGIMGKPMSKNLLKA--GYSLVVYDRNPEAVAEVIAAGAETASTAKAVAEQCDVIITMLPNS 69 (296)
T ss_pred CCceEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEeCCCH
Confidence 468999999999999999999999 999999999887766555444432211124567899999998754
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00011 Score=66.95 Aligned_cols=64 Identities=13% Similarity=0.119 Sum_probs=45.6
Q ss_pred EEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc----c--C---eeeecCCcc-----------ccCCCCE
Q 024494 88 LIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN----M--G---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 88 LV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~----~--~---v~~d~~d~~-----------~~~~~D~ 145 (267)
+|||+ +-||.+++++|.++ | ++|+..+|+.++...+.. . . +..|+.|.+ .....|+
T Consensus 1 lITGas~GIG~aia~~l~~~--G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~ 78 (308)
T PLN00015 1 IITGASSGLGLATAKALAET--GKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV 78 (308)
T ss_pred CEeCCCChHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence 58886 99999999999999 9 999999998654432211 1 1 234555531 2356899
Q ss_pred EEEccCCC
Q 024494 146 VIFCAPPS 153 (267)
Q Consensus 146 Vi~~a~~~ 153 (267)
+||+|+..
T Consensus 79 lInnAG~~ 86 (308)
T PLN00015 79 LVCNAAVY 86 (308)
T ss_pred EEECCCcC
Confidence 99999863
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.00015 Score=64.22 Aligned_cols=134 Identities=9% Similarity=-0.016 Sum_probs=80.5
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCCC---chhhhc-----cCeeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTADH---HDELIN-----MGITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~~---~~~l~~-----~~v~~d~~d~-----------~~~~~ 142 (267)
+.+||||+ +-||++++++|.++ |++|+...|.... ..++.. ..+.+|+.|+ +...+
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQ--GAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 67999993 58999999999999 9999988765321 222211 1234466554 12457
Q ss_pred CCEEEEccCCCCC--------CC-----hHHHHH-------HHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 143 FPYVIFCAPPSRS--------LD-----YPGDVR-------LAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 143 ~D~Vi~~a~~~~~--------~~-----~~~~~~-------~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.|++||+|+.... .+ +...+. .+. .. ....+++|++||.+.+...
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~---------- 154 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI---------- 154 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC----------
Confidence 9999999986421 11 111100 010 11 1123689999987654211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +..+.|+.+--+
T Consensus 155 --~~-~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~ 196 (261)
T PRK08690 155 --PN-YNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTL 196 (261)
T ss_pred --CC-cccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccch
Confidence 11 246888898887665432 3 677888888654
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.94 E-value=1.1e-05 Score=71.91 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=52.6
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC---CeEEEEeCCCCCchhhhcc-CeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG---~~V~~l~R~~~~~~~l~~~-~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||+|.|+|+|.+|..+++.|.+. | ++|++++|++++...+... ++.......+.+.++|+||.|..+.
T Consensus 1 ~mm~I~iIG~G~mG~~la~~l~~~--g~~~~~v~v~~r~~~~~~~~~~~~g~~~~~~~~~~~~~advVil~v~~~ 73 (267)
T PRK11880 1 MMKKIGFIGGGNMASAIIGGLLAS--GVPAKDIIVSDPSPEKRAALAEEYGVRAATDNQEAAQEADVVVLAVKPQ 73 (267)
T ss_pred CCCEEEEEechHHHHHHHHHHHhC--CCCcceEEEEcCCHHHHHHHHHhcCCeecCChHHHHhcCCEEEEEcCHH
Confidence 578999999999999999999998 8 7899999988766555432 4433222223467899999998664
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.6e-05 Score=68.00 Aligned_cols=124 Identities=22% Similarity=0.223 Sum_probs=83.9
Q ss_pred eEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-----hhhc-----cCee-----eecCCcc------ccCCC
Q 024494 86 DLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----ELIN-----MGIT-----PSLKWTE------ATQKF 143 (267)
Q Consensus 86 ~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-----~l~~-----~~v~-----~d~~d~~------~~~~~ 143 (267)
-.||+| +|.=|+.|++.|+.+ |++|.++.|+..... .+-. .+.. .|++|.. ...++
T Consensus 30 vALITGItGQDGSYLaEfLL~K--gYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikP 107 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSK--GYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKP 107 (376)
T ss_pred EEEEecccCCCchHHHHHHHhC--CceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCc
Confidence 468889 599999999999999 999999998655332 1110 1111 1344432 23578
Q ss_pred CEEEEccCCCCC------CChH---H--HHHHHHHHh--C---CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 144 PYVIFCAPPSRS------LDYP---G--DVRLAALSW--N---GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 144 D~Vi~~a~~~~~------~~~~---~--~~~~l~~~~--~---~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+-|+|+|+.+.. .+|. + +...++.+. + ..-||-..||...||.....|..|.+|..| +++|+
T Consensus 108 tEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyP--RSPYa 185 (376)
T KOG1372|consen 108 TEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYP--RSPYA 185 (376)
T ss_pred hhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCC--CChhH
Confidence 889999887653 2232 1 122232322 2 235899999999999877778899999998 68998
Q ss_pred HHHHHH
Q 024494 208 DVLLKA 213 (267)
Q Consensus 208 ~~k~~a 213 (267)
.+|..+
T Consensus 186 ~aKmy~ 191 (376)
T KOG1372|consen 186 AAKMYG 191 (376)
T ss_pred Hhhhhh
Confidence 888644
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.93 E-value=5e-05 Score=69.47 Aligned_cols=95 Identities=17% Similarity=0.133 Sum_probs=60.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-----------hhccCee-----------ee-cCCc-cc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGIT-----------PS-LKWT-EA 139 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-----------l~~~~v~-----------~d-~~d~-~~ 139 (267)
||+|.|+|+|.+|..++..|++. |++|++++|+++..+. +...+.. .. ..+. ++
T Consensus 2 ~~~V~VIG~G~mG~~iA~~la~~--G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 2 MGSVAIIGAGLIGRAWAIVFARA--GHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred CcEEEEECccHHHHHHHHHHHHC--CCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHh
Confidence 47899999999999999999999 9999999998765432 1122211 01 1233 35
Q ss_pred cCCCCEEEEccCCCCCCChHHHHHHHHH--HhCCCCcEEEEcCCcccc
Q 024494 140 TQKFPYVIFCAPPSRSLDYPGDVRLAAL--SWNGEGSFLFTSSSAIYD 185 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg 185 (267)
+.++|+|+.|.+... +..+.++. .....+..|+.||+..+.
T Consensus 80 ~~~ad~Vi~avpe~~-----~~k~~~~~~l~~~~~~~~ii~ssts~~~ 122 (308)
T PRK06129 80 VADADYVQESAPENL-----ELKRALFAELDALAPPHAILASSTSALL 122 (308)
T ss_pred hCCCCEEEECCcCCH-----HHHHHHHHHHHHhCCCcceEEEeCCCCC
Confidence 689999999985431 11111111 111234556677777654
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00021 Score=63.27 Aligned_cols=134 Identities=11% Similarity=0.083 Sum_probs=80.4
Q ss_pred CeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhcc-C----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-G----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~~-~----v~~d~~d~-----------~~~~~ 142 (267)
+.++|||+ + -||++++++|.++ |++|+..+|+.. ...++... + +..|+.|+ +....
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~--G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKH--GAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHc--CCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 67899996 3 5999999999999 999998888732 12222111 2 24566654 13467
Q ss_pred CCEEEEccCCCCC-------CC-----hHHHHH-------HHHHH----hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS-------LD-----YPGDVR-------LAALS----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-------~~-----~~~~~~-------~l~~~----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+++.... .+ +.+.+. .+... ....+++|++||.+.... .
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~---------~--- 154 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV---------I--- 154 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC---------C---
Confidence 9999999985321 01 111111 11111 112368999998654311 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +..+-|+.+-.+
T Consensus 155 ~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~ 196 (260)
T PRK06603 155 PN-YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTL 196 (260)
T ss_pred Cc-ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcch
Confidence 11 246888998887765542 2 677888887544
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00023 Score=62.97 Aligned_cols=133 Identities=12% Similarity=0.031 Sum_probs=78.9
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCC--CCchhhhc------cCeeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN------MGITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~--~~~~~l~~------~~v~~d~~d~-----------~~~~~ 142 (267)
++++|||+ +-||.+++++|.++ |++|+.++|+. +..+++.. ..+..|+.|+ +...+
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~--G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQ--GAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHC--CCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 67999995 68999999999999 99999998764 22222211 1234455554 12467
Q ss_pred CCEEEEccCCCCC--------C-C---hHHHHH-H------HH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS--------L-D---YPGDVR-L------AA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~--------~-~---~~~~~~-~------l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+|+.... + + +.+.+. + +. .. ....+++|++|+.+..+ .
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-------------~ 152 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-------------W 152 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc-------------C
Confidence 9999999986421 1 1 111111 1 11 11 11235788887532111 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. +..|+.+|...+.+.+.. + +..+.|+.+--+
T Consensus 153 ~~-~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~ 194 (256)
T PRK07889 153 PA-YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTL 194 (256)
T ss_pred Cc-cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccCh
Confidence 21 346888998887665432 2 667888887654
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00026 Score=64.63 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=30.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+.++|||+ +-||++++++|+++ |++|+.++|+.
T Consensus 9 k~~lITGgs~GIG~aia~~la~~--G~~Vv~~~r~~ 42 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAA--GATVYVTGRST 42 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeccc
Confidence 67999996 88999999999999 99999999974
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00021 Score=64.71 Aligned_cols=120 Identities=16% Similarity=0.072 Sum_probs=77.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hcc---C-e---eeecCCc-----------cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM---G-I---TPSLKWT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~---~-v---~~d~~d~-----------~~~~ 141 (267)
+.|+|||| .-||.++|.+|.++ |.+++.+.|..++.+.+ .+. . + ..|+.|. ..+.
T Consensus 13 kvVvITGASsGIG~~lA~~la~~--G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKR--GAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhC--CCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 67899997 88999999999999 99888888776655443 111 1 2 2455553 2567
Q ss_pred CCCEEEEccCCCCCC----ChHHHHHHHH-----------------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL----DYPGDVRLAA-----------------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~~~~~~~~l~-----------------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+.|++||-||..... ...+.+++++ +...+-+++|.+||+.-+-. .|..
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~---------~P~~- 160 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMP---------LPFR- 160 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccC---------CCcc-
Confidence 999999999976532 1122222111 12224589999999875432 1222
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 024494 201 IGRSPRTDVLLKAEKVILE 219 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~ 219 (267)
..|..+|.+.+.+...
T Consensus 161 ---~~Y~ASK~Al~~f~et 176 (282)
T KOG1205|consen 161 ---SIYSASKHALEGFFET 176 (282)
T ss_pred ---cccchHHHHHHHHHHH
Confidence 2577889888876543
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.88 E-value=6.7e-05 Score=71.35 Aligned_cols=66 Identities=20% Similarity=0.365 Sum_probs=50.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-------------------C-eeeecCCc-cccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------------G-ITPSLKWT-EATQKF 143 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-------------------~-v~~d~~d~-~~~~~~ 143 (267)
|+|.|+|+|++|..++..|.+. ||+|+++++++++.+.+..- + +.. ..+. +.+.++
T Consensus 1 mkI~vIGlG~~G~~lA~~La~~--G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~-~~~~~~~~~~a 77 (411)
T TIGR03026 1 MKIAVIGLGYVGLPLAALLADL--GHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRA-TTDYEDAIRDA 77 (411)
T ss_pred CEEEEECCCchhHHHHHHHHhc--CCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE-ECCHHHHHhhC
Confidence 5899999999999999999999 99999999988776554321 1 111 1222 356789
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|+||.|++..
T Consensus 78 dvvii~vpt~ 87 (411)
T TIGR03026 78 DVIIICVPTP 87 (411)
T ss_pred CEEEEEeCCC
Confidence 9999999854
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.87 E-value=2.1e-05 Score=66.97 Aligned_cols=65 Identities=25% Similarity=0.432 Sum_probs=41.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee----e---------------c-CCc-cccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----S---------------L-KWT-EATQKF 143 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~----d---------------~-~d~-~~~~~~ 143 (267)
|||.|+|.||+|..++..|.+. ||+|++++.++++.+.+.. |..+ . . .|. ++..++
T Consensus 1 M~I~ViGlGyvGl~~A~~lA~~--G~~V~g~D~~~~~v~~l~~-g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~a 77 (185)
T PF03721_consen 1 MKIAVIGLGYVGLPLAAALAEK--GHQVIGVDIDEEKVEALNN-GELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDA 77 (185)
T ss_dssp -EEEEE--STTHHHHHHHHHHT--TSEEEEE-S-HHHHHHHHT-TSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-
T ss_pred CEEEEECCCcchHHHHHHHHhC--CCEEEEEeCChHHHHHHhh-ccccccccchhhhhccccccccchhhhhhhhhhhcc
Confidence 7999999999999999999999 9999999998877665542 2111 0 0 111 246789
Q ss_pred CEEEEccCC
Q 024494 144 PYVIFCAPP 152 (267)
Q Consensus 144 D~Vi~~a~~ 152 (267)
|++|.|++.
T Consensus 78 dv~~I~VpT 86 (185)
T PF03721_consen 78 DVVFICVPT 86 (185)
T ss_dssp SEEEE----
T ss_pred ceEEEecCC
Confidence 999999984
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=2e-05 Score=71.69 Aligned_cols=68 Identities=22% Similarity=0.336 Sum_probs=54.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|++|.|+|.|.+|..+++.|.+. |++|++++|++++.+.+...++.......+...++|+||.|.+..
T Consensus 1 m~~Ig~IGlG~mG~~mA~~l~~~--G~~V~v~d~~~~~~~~~~~~g~~~~~s~~~~~~~aDvVi~~vp~~ 68 (296)
T PRK15461 1 MAAIAFIGLGQMGSPMASNLLKQ--GHQLQVFDVNPQAVDALVDKGATPAASPAQAAAGAEFVITMLPNG 68 (296)
T ss_pred CCeEEEEeeCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHcCCcccCCHHHHHhcCCEEEEecCCH
Confidence 46899999999999999999999 999999999988877665555432222224567899999998764
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0004 Score=61.57 Aligned_cols=134 Identities=13% Similarity=0.079 Sum_probs=80.4
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCC---CCCchhhhc-----cCeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT---ADHHDELIN-----MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~---~~~~~~l~~-----~~v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ +-||++++++|.++ |++|+...|. .+...++.. ..+..|+.|++ ....
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHC--CCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 67999993 57999999999999 9999987654 222222211 12345665541 3467
Q ss_pred CCEEEEccCCCCC--------CC-hHHHHHH-----------HH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRS--------LD-YPGDVRL-----------AA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~--------~~-~~~~~~~-----------l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.|++||+|+.... .+ -.+..+. +. +. ..+.+++|++||....-. .
T Consensus 85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~---------~-- 153 (260)
T PRK06997 85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV---------V-- 153 (260)
T ss_pred CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC---------C--
Confidence 9999999985321 01 0111111 11 11 123468999998653210 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +..+.|+.+--+
T Consensus 154 -~~-~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~ 195 (260)
T PRK06997 154 -PN-YNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTL 195 (260)
T ss_pred -CC-cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccc
Confidence 11 246889998887765542 2 677888877553
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.9e-05 Score=68.37 Aligned_cols=69 Identities=16% Similarity=0.160 Sum_probs=50.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee----------------cCCccccCCCCEE
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS----------------LKWTEATQKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d----------------~~d~~~~~~~D~V 146 (267)
|||+|.|+|+|.+|..++..|.+. ||+|++++|++. .+.+...++... ..+.+...++|+|
T Consensus 1 ~~mkI~IiG~G~mG~~~A~~L~~~--G~~V~~~~r~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v 77 (341)
T PRK08229 1 MMARICVLGAGSIGCYLGGRLAAA--GADVTLIGRARI-GDELRAHGLTLTDYRGRDVRVPPSAIAFSTDPAALATADLV 77 (341)
T ss_pred CCceEEEECCCHHHHHHHHHHHhc--CCcEEEEecHHH-HHHHHhcCceeecCCCcceecccceeEeccChhhccCCCEE
Confidence 578999999999999999999999 999999999643 233333332210 1223456789999
Q ss_pred EEccCCCC
Q 024494 147 IFCAPPSR 154 (267)
Q Consensus 147 i~~a~~~~ 154 (267)
|.|.....
T Consensus 78 il~vk~~~ 85 (341)
T PRK08229 78 LVTVKSAA 85 (341)
T ss_pred EEEecCcc
Confidence 99986543
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00016 Score=69.07 Aligned_cols=68 Identities=18% Similarity=0.289 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCC-------------ccccCCCCEEE
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKW-------------TEATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d-------------~~~~~~~D~Vi 147 (267)
||+|.|+|.|++|..++..|.+. ||+|+++++++++.+.+..-... ..+.+ ....+++|+||
T Consensus 3 ~~kI~VIGlG~~G~~~A~~La~~--G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvi 80 (415)
T PRK11064 3 FETISVIGLGYIGLPTAAAFASR--QKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFL 80 (415)
T ss_pred ccEEEEECcchhhHHHHHHHHhC--CCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEE
Confidence 58999999999999999999999 99999999998877654321111 00000 01234799999
Q ss_pred EccCCC
Q 024494 148 FCAPPS 153 (267)
Q Consensus 148 ~~a~~~ 153 (267)
.|++..
T Consensus 81 i~vptp 86 (415)
T PRK11064 81 IAVPTP 86 (415)
T ss_pred EEcCCC
Confidence 999864
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00019 Score=63.21 Aligned_cols=133 Identities=13% Similarity=0.030 Sum_probs=79.6
Q ss_pred eEEEEcc-cHHhHHHHHHHHh----cCCCCeEEEEeCCCCCchhhh----c--cC-----eeeecCCcc-----------
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQ----EHPGCQIYGQTMTADHHDELI----N--MG-----ITPSLKWTE----------- 138 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~----~~pG~~V~~l~R~~~~~~~l~----~--~~-----v~~d~~d~~----------- 138 (267)
.++|||+ +.||.+++++|.+ + |++|+.+.|+.+...++. . .+ +..|+.|++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSP--GSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccC--CcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHh
Confidence 4789996 8999999999987 6 999999999876543321 1 01 234555531
Q ss_pred ccC----CCCEEEEccCCCCC-----CC--hHHHH---------------HHHH--HHhC-C-CCcEEEEcCCccccCCC
Q 024494 139 ATQ----KFPYVIFCAPPSRS-----LD--YPGDV---------------RLAA--LSWN-G-EGSFLFTSSSAIYDCSD 188 (267)
Q Consensus 139 ~~~----~~D~Vi~~a~~~~~-----~~--~~~~~---------------~~l~--~~~~-~-v~r~V~~SS~~VYg~~~ 188 (267)
... +.|+|||+|+.... .+ -.+.. +.++ +... + .+++|++||...+...
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~- 158 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPF- 158 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCC-
Confidence 111 12689999985311 10 01111 1111 1111 2 3589999997654211
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +..+.|+.+-.+
T Consensus 159 -----------~~-~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 159 -----------KG-WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred -----------CC-chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 11 247999999988776543 2 566788887554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.81 E-value=1.4e-05 Score=60.06 Aligned_cols=67 Identities=22% Similarity=0.364 Sum_probs=51.4
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCC---CeEEEE-eCCCCCchhhhc-cCeeeec-CCccccCCCCEEEEccCCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQ-TMTADHHDELIN-MGITPSL-KWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG---~~V~~l-~R~~~~~~~l~~-~~v~~d~-~d~~~~~~~D~Vi~~a~~~~ 154 (267)
||.|+|+|.+|.+|++.|.+. | ++|+.. +|++++..++.+ .++.... .+.+..+++|+||.|..|..
T Consensus 1 kI~iIG~G~mg~al~~~l~~~--g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~advvilav~p~~ 73 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLAS--GIKPHEVIIVSSRSPEKAAELAKEYGVQATADDNEEAAQEADVVILAVKPQQ 73 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHT--TS-GGEEEEEEESSHHHHHHHHHHCTTEEESEEHHHHHHHTSEEEE-S-GGG
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCCceeEEeeccCcHHHHHHHHHhhccccccCChHHhhccCCEEEEEECHHH
Confidence 688999999999999999999 9 999955 999988776643 3444443 33456779999999998864
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.81 E-value=9.3e-05 Score=65.04 Aligned_cols=145 Identities=15% Similarity=0.118 Sum_probs=88.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC--CCCCchhhhccC--eeeecCCcc------ccCCCCEEEEccCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMG--ITPSLKWTE------ATQKFPYVIFCAPP- 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R--~~~~~~~l~~~~--v~~d~~d~~------~~~~~D~Vi~~a~~- 152 (267)
.+|||+|+ |.+|..++..|+.+. |-+-+.++- .|.. ...+.| +-.|+.|-+ .-...|++||..+-
T Consensus 45 PrvLITG~LGQLG~~~A~LLR~~y-Gs~~VILSDI~KPp~--~V~~~GPyIy~DILD~K~L~eIVVn~RIdWL~HfSALL 121 (366)
T KOG2774|consen 45 PRVLITGSLGQLGRGLASLLRYMY-GSECVILSDIVKPPA--NVTDVGPYIYLDILDQKSLEEIVVNKRIDWLVHFSALL 121 (366)
T ss_pred CeEEEecchHHHhHHHHHHHHHHh-CCccEehhhccCCch--hhcccCCchhhhhhccccHHHhhcccccceeeeHHHHH
Confidence 78999997 999999999999886 665444432 2221 111122 233443321 22568999986431
Q ss_pred -----CCCC----ChHHHHHHHHHHhC-CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH---
Q 024494 153 -----SRSL----DYPGDVRLAALSWN-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE--- 219 (267)
Q Consensus 153 -----~~~~----~~~~~~~~l~~~~~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~--- 219 (267)
.+.. -+.+++.+++.-++ ..-++..-|+++.||......-+.+-.+.. ++..||.+|+.+|-+-.-
T Consensus 122 SAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~iFVPSTIGAFGPtSPRNPTPdltIQR-PRTIYGVSKVHAEL~GEy~~h 200 (366)
T KOG2774|consen 122 SAVGETNVPLALQVNIRGVHNILQVAAKHKLKVFVPSTIGAFGPTSPRNPTPDLTIQR-PRTIYGVSKVHAELLGEYFNH 200 (366)
T ss_pred HHhcccCCceeeeecchhhhHHHHHHHHcCeeEeecccccccCCCCCCCCCCCeeeec-CceeechhHHHHHHHHHHHHh
Confidence 1111 14566777754222 334677789999999865443333333322 156899999999865332
Q ss_pred -cC--eeEEeeCccccC
Q 024494 220 -FG--GCVLRLAGLYIS 233 (267)
Q Consensus 220 -~~--~~IlR~~~iyGp 233 (267)
++ .-.+|++++...
T Consensus 201 rFg~dfr~~rfPg~is~ 217 (366)
T KOG2774|consen 201 RFGVDFRSMRFPGIISA 217 (366)
T ss_pred hcCccceecccCccccc
Confidence 23 678898888765
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00015 Score=59.24 Aligned_cols=119 Identities=19% Similarity=0.144 Sum_probs=74.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCC--CCCchhh----hccC-----eeeecCCc-----------ccc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMT--ADHHDEL----INMG-----ITPSLKWT-----------EAT 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~--~~~~~~l----~~~~-----v~~d~~d~-----------~~~ 140 (267)
|.++|+|+ |-||+.++++|.++ |. .|+.+.|+ .+...++ ...+ +..|+.++ +..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR--GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--CceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc
Confidence 46899996 99999999999999 65 77788887 2322222 2122 22344443 134
Q ss_pred CCCCEEEEccCCCCCCC----hHHHHHHH--------------HHHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD----YPGDVRLA--------------ALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~----~~~~~~~l--------------~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
...|++||+++...... -.+.+... +.. .+.+++|++||....-.. |.
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~------------~~- 144 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIAGVRGS------------PG- 144 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGGGTSSS------------TT-
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchhhccCC------------CC-
Confidence 68999999999765321 11111111 012 356799999987654211 11
Q ss_pred CCHHHHHHHHHHHHHHH
Q 024494 203 RSPRTDVLLKAEKVILE 219 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~ 219 (267)
...|..+|.+.+.+.+.
T Consensus 145 ~~~Y~askaal~~~~~~ 161 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQS 161 (167)
T ss_dssp BHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHH
Confidence 24799999988877654
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.78 E-value=3.6e-05 Score=70.26 Aligned_cols=67 Identities=13% Similarity=0.135 Sum_probs=50.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee------------ee-cCCc-cccCCCCEEEEc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------PS-LKWT-EATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~------------~d-~~d~-~~~~~~D~Vi~~ 149 (267)
||+|.|+|+|.+|..++..|.+. |++|++++|+++..+.+...+.. .. ..++ +...++|+||.|
T Consensus 1 mmkI~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (325)
T PRK00094 1 MMKIAVLGAGSWGTALAIVLARN--GHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVA 78 (325)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEe
Confidence 67999999999999999999999 99999999987766555432211 11 1232 355789999999
Q ss_pred cCC
Q 024494 150 APP 152 (267)
Q Consensus 150 a~~ 152 (267)
...
T Consensus 79 v~~ 81 (325)
T PRK00094 79 VPS 81 (325)
T ss_pred CCH
Confidence 876
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.76 E-value=4e-05 Score=66.15 Aligned_cols=68 Identities=15% Similarity=0.156 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhh-ccCeeeec-CCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELI-NMGITPSL-KWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~-~~~v~~d~-~d~~~~~~~D~Vi~~a~~~ 153 (267)
||++.|+|+|.||..|+++|.+. ||+|+.-+|+.++ ..... ..+....- .+.++.+.+|+||...+..
T Consensus 1 m~~~~i~GtGniG~alA~~~a~a--g~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~~ 71 (211)
T COG2085 1 MMIIAIIGTGNIGSALALRLAKA--GHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPFE 71 (211)
T ss_pred CcEEEEeccChHHHHHHHHHHhC--CCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccHH
Confidence 79999999999999999999999 9999988665443 32221 12222222 3346788899999988764
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.74 E-value=4.9e-05 Score=68.56 Aligned_cols=67 Identities=21% Similarity=0.317 Sum_probs=51.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec-CCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-KWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~-~d~~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|..++..|.+. |++|++++|+++..+.....+..... .+.+.+.++|+||.|+++.
T Consensus 1 m~I~IIG~G~mG~sla~~L~~~--g~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~aDlVilavp~~ 68 (279)
T PRK07417 1 MKIGIVGLGLIGGSLGLDLRSL--GHTVYGVSRRESTCERAIERGLVDEASTDLSLLKDCDLVILALPIG 68 (279)
T ss_pred CeEEEEeecHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCCcccccCCHhHhcCCCEEEEcCCHH
Confidence 5799999999999999999999 99999999987766555444432211 2234567899999998754
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00028 Score=66.68 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=60.4
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC-----ee-eecC--CccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG-----IT-PSLK--WTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~-----v~-~d~~--d~~~~~~~D~Vi~~a~~~ 153 (267)
+++||.|+|+ |++|+.|++.|.++ |+++|+.++++......+.... .. .+.. +.+.+.++|+||.+++..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~h-P~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~ 115 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANH-PDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHG 115 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhC-CCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHH
Confidence 4589999997 99999999988877 7899999988644322221111 01 1111 122357899999988653
Q ss_pred CCCChHHHHHHHHHHhCCCCcEEEEcCCccccC
Q 024494 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDC 186 (267)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~v~r~V~~SS~~VYg~ 186 (267)
. ..+++.......++|-.|+..-+.+
T Consensus 116 ~-------s~~i~~~~~~g~~VIDlSs~fRl~~ 141 (381)
T PLN02968 116 T-------TQEIIKALPKDLKIVDLSADFRLRD 141 (381)
T ss_pred H-------HHHHHHHHhCCCEEEEcCchhccCC
Confidence 1 1222111112378999998876654
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00019 Score=67.88 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=47.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----------------cCeeeec-CC-ccccCCCCEE
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----------------MGITPSL-KW-TEATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----------------~~v~~d~-~d-~~~~~~~D~V 146 (267)
|||.|+|+|++|..++.. .+. ||+|+++++++++.+.+.. .+..... .+ .+...++|+|
T Consensus 1 mkI~VIGlGyvGl~~A~~-lA~--G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~v 77 (388)
T PRK15057 1 MKITISGTGYVGLSNGLL-IAQ--NHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYV 77 (388)
T ss_pred CEEEEECCCHHHHHHHHH-HHh--CCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEE
Confidence 589999999999999955 457 9999999999887765542 1111111 11 2346789999
Q ss_pred EEccCCC
Q 024494 147 IFCAPPS 153 (267)
Q Consensus 147 i~~a~~~ 153 (267)
|.|.+..
T Consensus 78 ii~Vpt~ 84 (388)
T PRK15057 78 IIATPTD 84 (388)
T ss_pred EEeCCCC
Confidence 9999854
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=97.68 E-value=6.5e-05 Score=66.95 Aligned_cols=66 Identities=17% Similarity=0.287 Sum_probs=51.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC----eEEEE-eCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQ-TMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~----~V~~l-~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|||.|+|+|.+|..+++.|++. |+ +|+++ +|++++...+...++.......+...++|+||.|..+
T Consensus 1 ~kI~~IG~G~mG~a~a~~L~~~--g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~~~~~e~~~~aDvVil~v~~ 71 (266)
T PLN02688 1 FRVGFIGAGKMAEAIARGLVAS--GVVPPSRISTADDSNPARRDVFQSLGVKTAASNTEVVKSSDVIILAVKP 71 (266)
T ss_pred CeEEEECCcHHHHHHHHHHHHC--CCCCcceEEEEeCCCHHHHHHHHHcCCEEeCChHHHHhcCCEEEEEECc
Confidence 6799999999999999999998 88 89998 8887776655555654432223456789999999954
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00029 Score=68.38 Aligned_cols=69 Identities=10% Similarity=0.110 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---e--------------ec-CCc-cccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---P--------------SL-KWT-EATQKFP 144 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~--------------d~-~d~-~~~~~~D 144 (267)
||+|.|+|+|++|..++..|.+...|++|++++.++++.+.+..-... . .. .|. +.+.++|
T Consensus 1 ~m~I~ViG~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~ad 80 (473)
T PLN02353 1 MVKICCIGAGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEAD 80 (473)
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcCC
Confidence 689999999999999999999872248899999988877665421110 0 00 111 3568899
Q ss_pred EEEEccCC
Q 024494 145 YVIFCAPP 152 (267)
Q Consensus 145 ~Vi~~a~~ 152 (267)
++|.|++.
T Consensus 81 vi~I~V~T 88 (473)
T PLN02353 81 IVFVSVNT 88 (473)
T ss_pred EEEEEeCC
Confidence 99999983
|
|
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00025 Score=67.94 Aligned_cols=66 Identities=21% Similarity=0.296 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee----------------ecCCccccCCCCEEE
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----------------SLKWTEATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~----------------d~~d~~~~~~~D~Vi 147 (267)
+|+|.|+|.|++|..++..| .+ ||+|+++++++++.+.+. .|..+ ...+.+...++|++|
T Consensus 6 ~mkI~vIGlGyvGlpmA~~l-a~--~~~V~g~D~~~~~ve~l~-~G~~~~~e~~~~~l~~~g~l~~t~~~~~~~~advvi 81 (425)
T PRK15182 6 EVKIAIIGLGYVGLPLAVEF-GK--SRQVVGFDVNKKRILELK-NGVDVNLETTEEELREARYLKFTSEIEKIKECNFYI 81 (425)
T ss_pred CCeEEEECcCcchHHHHHHH-hc--CCEEEEEeCCHHHHHHHH-CcCCCCCCCCHHHHHhhCCeeEEeCHHHHcCCCEEE
Confidence 48999999999999999996 45 699999999998887776 33321 012224568999999
Q ss_pred EccCCC
Q 024494 148 FCAPPS 153 (267)
Q Consensus 148 ~~a~~~ 153 (267)
.|++..
T Consensus 82 i~Vptp 87 (425)
T PRK15182 82 ITVPTP 87 (425)
T ss_pred EEcCCC
Confidence 999854
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=97.61 E-value=5.8e-05 Score=68.32 Aligned_cols=66 Identities=20% Similarity=0.316 Sum_probs=51.7
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+|.|+|+|.+|+.+++.|.+. |++|++++|++++.+.+...+........+...++|+||.|.+..
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKA--GYQLHVTTIGPEVADELLAAGAVTAETARQVTEQADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCcccCCHHHHHhcCCEEEEecCCH
Confidence 588999999999999999999 999999999987776665544432222224678899999998753
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=7.7e-05 Score=67.63 Aligned_cols=67 Identities=21% Similarity=0.269 Sum_probs=55.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++|.++|.|..|..++.+|+++ ||+|++.+|++++ .+.+...|........+...++|+||-|.+..
T Consensus 1 ~kIafIGLG~MG~pmA~~L~~a--G~~v~v~~r~~~ka~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~ 68 (286)
T COG2084 1 MKIAFIGLGIMGSPMAANLLKA--GHEVTVYNRTPEKAAELLAAAGATVAASPAEAAAEADVVITMLPDD 68 (286)
T ss_pred CeEEEEcCchhhHHHHHHHHHC--CCEEEEEeCChhhhhHHHHHcCCcccCCHHHHHHhCCEEEEecCCH
Confidence 5799999999999999999999 9999999999988 44444456655444346788999999998754
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0002 Score=63.08 Aligned_cols=60 Identities=20% Similarity=0.282 Sum_probs=37.9
Q ss_pred cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-hhh-ccCe---ee--ecCCc--ccc--CCCCEEEEccCCCC
Q 024494 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELI-NMGI---TP--SLKWT--EAT--QKFPYVIFCAPPSR 154 (267)
Q Consensus 93 G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-~l~-~~~v---~~--d~~d~--~~~--~~~D~Vi~~a~~~~ 154 (267)
||+|++|+++|+++ |++|+.+++.....+ .+. .... .. ++.+. +.+ .++|+|||+|+..+
T Consensus 29 GfiGs~LA~~L~~~--Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD 99 (229)
T PRK09620 29 GTIGRIIAEELISK--GAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSD 99 (229)
T ss_pred CHHHHHHHHHHHHC--CCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHHHhcccCCCEEEECccccc
Confidence 99999999999999 999998886422111 111 1111 11 11111 223 46899999999754
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00049 Score=63.64 Aligned_cols=69 Identities=13% Similarity=0.131 Sum_probs=46.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcC-----CCCeEEEEeCCCCC--chhhhccCee-------ee---cCC-ccccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEH-----PGCQIYGQTMTADH--HDELINMGIT-------PS---LKW-TEATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~-----pG~~V~~l~R~~~~--~~~l~~~~v~-------~d---~~d-~~~~~~~D~ 145 (267)
.||+|+|+ |++|++++..|..+. .+.+|..+++++.. ..... .++. .+ ..+ .+.++++|+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~-~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVV-MELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCcccccccee-eehhhccccccCCceecCCHHHHhCCCCE
Confidence 57999998 999999999998840 03589999996532 21110 1110 01 122 257889999
Q ss_pred EEEccCCCC
Q 024494 146 VIFCAPPSR 154 (267)
Q Consensus 146 Vi~~a~~~~ 154 (267)
|||+|+...
T Consensus 82 VI~tAG~~~ 90 (325)
T cd01336 82 AILVGAMPR 90 (325)
T ss_pred EEEeCCcCC
Confidence 999999754
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0001 Score=66.45 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC----eEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~----~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|.|+|+|.+|.++++.|++. |+ +|++.+|++++...+.+ .++.....+.+...++|+||.|..|..
T Consensus 2 ~~~IgfIG~G~MG~aia~~L~~~--g~~~~~~I~v~~r~~~~~~~l~~~~g~~~~~~~~e~~~~aDiIiLavkP~~ 75 (272)
T PRK12491 2 NKQIGFIGCGNMGIAMIGGMINK--NIVSPDQIICSDLNVSNLKNASDKYGITITTNNNEVANSADILILSIKPDL 75 (272)
T ss_pred CCeEEEECccHHHHHHHHHHHHC--CCCCCceEEEECCCHHHHHHHHHhcCcEEeCCcHHHHhhCCEEEEEeChHH
Confidence 36899999999999999999987 64 79999998877665543 465432222345678999999998743
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00018 Score=65.54 Aligned_cols=66 Identities=23% Similarity=0.335 Sum_probs=50.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccC---CCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQ---KFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~---~~D~Vi~~a~~~ 153 (267)
|+|.|+|.|.+|+.+++.|++. |++|++++|++++.+.+...+.... .++ +... ++|+||.|.+..
T Consensus 1 m~Ig~IGlG~mG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~~g~~~~-~s~~~~~~~~~~advVi~~vp~~ 70 (299)
T PRK12490 1 MKLGLIGLGKMGGNMAERLRED--GHEVVGYDVNQEAVDVAGKLGITAR-HSLEELVSKLEAPRTIWVMVPAG 70 (299)
T ss_pred CEEEEEcccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCCCeec-CCHHHHHHhCCCCCEEEEEecCc
Confidence 4799999999999999999999 9999999999877766655554332 222 2222 379999998765
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0014 Score=60.32 Aligned_cols=146 Identities=13% Similarity=0.043 Sum_probs=88.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cC---eeeecCCc-----------cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MG---ITPSLKWT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~---v~~d~~d~-----------~~~~ 141 (267)
+.++|||+ .-||..++++|..+ |.+|+...|+.++..+..+ .. ...|+.+. ....
T Consensus 36 ~~~vVTGansGIG~eta~~La~~--Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALR--GAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 67899997 89999999999999 9999999999755433221 11 23455543 1356
Q ss_pred CCCEEEEccCCCCCC-----C-h--------HHH--HHHHH---HHhCCCCcEEEEcCCccccC--CCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL-----D-Y--------PGD--VRLAA---LSWNGEGSFLFTSSSAIYDC--SDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~-~--------~~~--~~~l~---~~~~~v~r~V~~SS~~VYg~--~~~~~~~E~~p~~p 200 (267)
..|++|+.||..... | + ... +-+++ +......|+|++||..- +. ..+....|......
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~~~ 192 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG-GGKIDLKDLSGEKAKLYS 192 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc-cCccchhhccchhccCcc
Confidence 789999999965321 1 1 110 11111 12233489999999775 22 11122222221111
Q ss_pred CCCCHHHHHHHHHHHHHHHc------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~------~--~~IlR~~~iyGp~ 234 (267)
....|+.+|++......+. + +..+.||.+..++
T Consensus 193 -~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~ 233 (314)
T KOG1208|consen 193 -SDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTG 233 (314)
T ss_pred -chhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccc
Confidence 1125899998775544332 3 6779999888885
|
|
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00016 Score=65.31 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=50.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee----------ecCCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----------SLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~----------d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|+|+|+|+|.+|..++..|.+. |++|+.++|+++..+.+...++.. ...+.+....+|+||.+.....
T Consensus 1 m~I~IiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vila~k~~~ 78 (304)
T PRK06522 1 MKIAILGAGAIGGLFGAALAQA--GHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAELGPQDLVILAVKAYQ 78 (304)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHcCCCCEEEEeccccc
Confidence 5899999999999999999999 999999999776655554434322 0122223478999999987653
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00025 Score=62.33 Aligned_cols=64 Identities=16% Similarity=0.164 Sum_probs=42.5
Q ss_pred EEEc-c-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-cCC----c----cccCCCCEEEEccCCCC
Q 024494 88 LIVG-P-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKW----T----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 88 LV~G-a-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~~d----~----~~~~~~D~Vi~~a~~~~ 154 (267)
.|++ + |++|++|+++|+++ |++|++++|...... ....++... ... . +.+.++|+|||+|+...
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~--G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd 93 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAA--GHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSD 93 (229)
T ss_pred eecCccchHHHHHHHHHHHhC--CCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence 4564 4 99999999999999 999999987643211 011122221 111 0 24567999999999764
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0013 Score=60.88 Aligned_cols=99 Identities=11% Similarity=0.076 Sum_probs=60.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--hhhccC--eee-ec-CC---ccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINMG--ITP-SL-KW---TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--~l~~~~--v~~-d~-~d---~~~~~~~D~Vi~~a~~~~ 154 (267)
.||+|+|+ |.||..++..|..+.-..++..+|.++.... ++.... ... +. .+ .+++.++|+||++|+...
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~~ 98 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVPR 98 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCCC
Confidence 69999998 9999999999987611248999998762211 111111 111 11 22 257899999999999754
Q ss_pred CC--C-------hHHHHHHHHH--HhCCCCcEEEEcCCcc
Q 024494 155 SL--D-------YPGDVRLAAL--SWNGEGSFLFTSSSAI 183 (267)
Q Consensus 155 ~~--~-------~~~~~~~l~~--~~~~v~r~V~~SS~~V 183 (267)
.. . +.+.++++.. ...++..+|+++|--+
T Consensus 99 ~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPv 138 (323)
T PLN00106 99 KPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPV 138 (323)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCc
Confidence 32 1 1222333332 2235677777776443
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0003 Score=64.10 Aligned_cols=66 Identities=20% Similarity=0.256 Sum_probs=50.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-ccc---CCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT---QKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~---~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|+.+++.|++. |++|++.+|++++.+.+...++... .++ +.. .++|+||.+.+..
T Consensus 1 m~Ig~IGlG~MG~~mA~~L~~~--g~~v~v~dr~~~~~~~~~~~g~~~~-~~~~e~~~~~~~~dvvi~~v~~~ 70 (301)
T PRK09599 1 MQLGMIGLGRMGGNMARRLLRG--GHEVVGYDRNPEAVEALAEEGATGA-DSLEELVAKLPAPRVVWLMVPAG 70 (301)
T ss_pred CEEEEEcccHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCeec-CCHHHHHhhcCCCCEEEEEecCC
Confidence 4899999999999999999999 9999999999887766655555432 122 222 3479999988764
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00025 Score=55.95 Aligned_cols=66 Identities=21% Similarity=0.317 Sum_probs=42.8
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhhhcc-----C-eeeec--CCccccCCCCEEEEccCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELINM-----G-ITPSL--KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l~~~-----~-v~~d~--~d~~~~~~~D~Vi~~a~~ 152 (267)
||.|+|+ |++|+.|++.|.+ +|..++..+..+.. ....+... + ....+ .+.+.+.++|+||.|.+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~-hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE-HPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH-TSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhc-CCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCch
Confidence 6899995 9999999999998 57888776654433 22222111 1 11112 344567899999999754
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00019 Score=65.56 Aligned_cols=69 Identities=23% Similarity=0.408 Sum_probs=51.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeeec-CCc-cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSL-KWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d~-~d~-~~~~~~D~Vi~~a~~~ 153 (267)
++++|.|+|+|.+|..++..|.+. |+ +|++++|+++........++.... .+. +.+.++|+||.|+++.
T Consensus 5 ~~~~I~IIG~G~mG~sla~~l~~~--g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvViiavp~~ 77 (307)
T PRK07502 5 LFDRVALIGIGLIGSSLARAIRRL--GLAGEIVGADRSAETRARARELGLGDRVTTSAAEAVKGADLVILCVPVG 77 (307)
T ss_pred CCcEEEEEeeCHHHHHHHHHHHhc--CCCcEEEEEECCHHHHHHHHhCCCCceecCCHHHHhcCCCEEEECCCHH
Confidence 347899999999999999999998 74 899999987765554444432211 222 3567899999999764
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00065 Score=63.80 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=51.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--------c------------CCc-cccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--------L------------KWT-EATQKF 143 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--------~------------~d~-~~~~~~ 143 (267)
|||-|+|+||+|...+..|.+. ||+|++++.++++.+.+.. |..+. + +|. ++..++
T Consensus 1 MkI~viGtGYVGLv~g~~lA~~--GHeVv~vDid~~KV~~ln~-g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~a 77 (414)
T COG1004 1 MKITVIGTGYVGLVTGACLAEL--GHEVVCVDIDESKVELLNK-GISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDA 77 (414)
T ss_pred CceEEECCchHHHHHHHHHHHc--CCeEEEEeCCHHHHHHHhC-CCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcC
Confidence 7899999999999999999999 9999999999888766542 22111 0 121 367899
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|++|.|.|..
T Consensus 78 dv~fIavgTP 87 (414)
T COG1004 78 DVVFIAVGTP 87 (414)
T ss_pred CEEEEEcCCC
Confidence 9999999944
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00048 Score=62.78 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=52.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--cCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--LKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|..+++.|.+. |++|++.+|++++.+.+.+.+.... ..+. +.+..+|+|+.|.+..
T Consensus 1 M~Ig~IGlG~mG~~la~~L~~~--g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~vp~~ 70 (298)
T TIGR00872 1 MQLGLIGLGRMGANIVRRLAKR--GHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVMVPHG 70 (298)
T ss_pred CEEEEEcchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEEcCch
Confidence 5899999999999999999999 9999999999888776665443321 1111 2456789999998765
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0011 Score=60.76 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=50.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhhc----------cCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN----------MGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~~----------~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|+|+|.+|+.++..|... | ++|+.+++++++...+.. ........+.+.+.++|+||++++.
T Consensus 1 ~kI~IIGaG~vG~~~a~~l~~~--g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~l~~aDIVIitag~ 78 (306)
T cd05291 1 RKVVIIGAGHVGSSFAYSLVNQ--GIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSDCKDADIVVITAGA 78 (306)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHHhCCCCEEEEccCC
Confidence 4799999999999999999998 7 699999998876543321 0111112333567899999999996
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 79 ~~ 80 (306)
T cd05291 79 PQ 80 (306)
T ss_pred CC
Confidence 54
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00016 Score=66.50 Aligned_cols=68 Identities=15% Similarity=0.183 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--------Cee----ee-cCCc-cccCCCCEEEEc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--------GIT----PS-LKWT-EATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--------~v~----~d-~~d~-~~~~~~D~Vi~~ 149 (267)
||+|.|+|+|-+|..++..|.+. ||+|++++|++++.+.+... +.. .. ..++ +..+.+|+||.|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~--G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~ 81 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASK--GVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVA 81 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEE
Confidence 47999999999999999999999 99999999987665444322 211 11 1232 346789999998
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
.+..
T Consensus 82 v~~~ 85 (328)
T PRK14618 82 VPSK 85 (328)
T ss_pred CchH
Confidence 8765
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0004 Score=70.07 Aligned_cols=67 Identities=12% Similarity=0.257 Sum_probs=49.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-ccc-CCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~-~~~D~Vi~~a~~~ 153 (267)
.+|+|.|+|+|.+|+.+++.|.+. |++|++++|+... ......++.. ..+. +.. .++|+||.|.++.
T Consensus 51 ~~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~-~~A~~~Gv~~-~~d~~e~~~~~aDvViLavP~~ 119 (667)
T PLN02712 51 TQLKIAIIGFGNYGQFLAKTLISQ--GHTVLAHSRSDHS-LAARSLGVSF-FLDPHDLCERHPDVILLCTSII 119 (667)
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHH-HHHHHcCCEE-eCCHHHHhhcCCCEEEEcCCHH
Confidence 457999999999999999999999 9999999997433 2222345433 2333 223 4699999998764
|
|
| >PRK08507 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00016 Score=65.06 Aligned_cols=68 Identities=18% Similarity=0.374 Sum_probs=49.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|+|.|+|+|.+|+.++..|.+. |+ +|++.+|+++........++.....+.+...++|+||.|.++..
T Consensus 1 m~I~iIG~G~mG~sla~~l~~~--g~~~~v~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~aD~Vilavp~~~ 70 (275)
T PRK08507 1 MKIGIIGLGLMGGSLGLALKEK--GLISKVYGYDHNELHLKKALELGLVDEIVSFEELKKCDVIFLAIPVDA 70 (275)
T ss_pred CEEEEEccCHHHHHHHHHHHhc--CCCCEEEEEcCCHHHHHHHHHCCCCcccCCHHHHhcCCEEEEeCcHHH
Confidence 4799999999999999999998 75 78999998776555444444211223322345999999997653
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00027 Score=57.43 Aligned_cols=69 Identities=22% Similarity=0.205 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCe---eeecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGI---TPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v---~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|.+|..+++.|.+. | ++|++++|++++...+.+ .+. ..+..+. +...++|+||.|.++..
T Consensus 19 ~~~i~iiG~G~~g~~~a~~l~~~--g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 19 GKKVLILGAGGAARAVAYALAEL--GAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLEELLAEADLIINTTPVGM 93 (155)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEcCCHHHHHHHHHHHhhcccceeecchhhccccCCEEEeCcCCCC
Confidence 37899999999999999999988 6 789999998776554432 122 1233333 34688999999998765
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00015 Score=63.05 Aligned_cols=68 Identities=19% Similarity=0.234 Sum_probs=50.2
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--------Cee--eec-CCccccCCCCEEEEccCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--------GIT--PSL-KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--------~v~--~d~-~d~~~~~~~D~Vi~~a~~ 152 (267)
|||.|+| +|.+|+.++..|.+. ||+|+..+|++++...+... ++. ... .+.+...++|+||.++++
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~--G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~ea~~~aDvVilavp~ 78 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKA--GNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGADNAEAAKRADVVILAVPW 78 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhC--CCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEeChHHHHhcCCEEEEECCH
Confidence 5899997 899999999999999 99999999988766544321 211 111 222467789999999876
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 79 ~~ 80 (219)
T TIGR01915 79 DH 80 (219)
T ss_pred HH
Confidence 53
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00054 Score=61.75 Aligned_cols=68 Identities=13% Similarity=0.207 Sum_probs=50.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCC-Cchhhhc-cCeeeecCCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD-HHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~-~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|+|.|+|+|.+|+++++.|++. | ++|++.+|+++ +...+.. .++.......+...++|+||.|..+..
T Consensus 4 mkI~~IG~G~mG~aia~~l~~~--g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~~~~~e~~~~aDvVilav~p~~ 77 (279)
T PRK07679 4 QNISFLGAGSIAEAIIGGLLHA--NVVKGEQITVSNRSNETRLQELHQKYGVKGTHNKKELLTDANILFLAMKPKD 77 (279)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCcceEEEECCCCHHHHHHHHHhcCceEeCCHHHHHhcCCEEEEEeCHHH
Confidence 6899999999999999999998 7 88999999764 4444432 254432222245678999999998764
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00059 Score=66.58 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------------------cC-eeeecCCc-cccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------------------MG-ITPSLKWT-EATQK 142 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------------------~~-v~~d~~d~-~~~~~ 142 (267)
.|+|.|+|+|.+|..++..|++. |++|++++++++..+.+.. .+ +.. ..+. +++.+
T Consensus 4 i~kIavIG~G~MG~~iA~~la~~--G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~-~~~~~ea~~~ 80 (495)
T PRK07531 4 IMKAACIGGGVIGGGWAARFLLA--GIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF-CASLAEAVAG 80 (495)
T ss_pred cCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe-eCCHHHHhcC
Confidence 37899999999999999999999 9999999998776543211 01 111 1233 46789
Q ss_pred CCEEEEccCCC
Q 024494 143 FPYVIFCAPPS 153 (267)
Q Consensus 143 ~D~Vi~~a~~~ 153 (267)
+|+|+-+++..
T Consensus 81 aD~Vieavpe~ 91 (495)
T PRK07531 81 ADWIQESVPER 91 (495)
T ss_pred CCEEEEcCcCC
Confidence 99999888665
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00029 Score=59.38 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=50.3
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~ 155 (267)
..-++|.|+|.|-||+.+++.|..- |.+|++.+|...........++... +. +.+..+|+|+.+.+....
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~~~~~~~~~~~~--~l~ell~~aDiv~~~~plt~~ 104 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAF--GMRVIGYDRSPKPEEGADEFGVEYV--SLDELLAQADIVSLHLPLTPE 104 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHT--T-EEEEEESSCHHHHHHHHTTEEES--SHHHHHHH-SEEEE-SSSSTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecC--CceeEEecccCChhhhcccccceee--ehhhhcchhhhhhhhhccccc
Confidence 3448999999999999999999999 9999999998765442333344332 22 466789999998886543
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00081 Score=61.36 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=49.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCe------e------ee-cCCc-cccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI------T------PS-LKWT-EATQKFP 144 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v------~------~d-~~d~-~~~~~~D 144 (267)
+++|.|+|+|.+|..++..|++. |++|++++++++..+.+.. .+. . .. ..+. +.+.++|
T Consensus 4 ~~~I~vIGaG~mG~~iA~~l~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aD 81 (311)
T PRK06130 4 IQNLAIIGAGTMGSGIAALFARK--GLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGAD 81 (311)
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCC
Confidence 47899999999999999999999 9999999998766543321 011 0 01 1222 3568899
Q ss_pred EEEEccCCC
Q 024494 145 YVIFCAPPS 153 (267)
Q Consensus 145 ~Vi~~a~~~ 153 (267)
+||.|.++.
T Consensus 82 lVi~av~~~ 90 (311)
T PRK06130 82 LVIEAVPEK 90 (311)
T ss_pred EEEEeccCc
Confidence 999998765
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00033 Score=61.47 Aligned_cols=94 Identities=17% Similarity=0.205 Sum_probs=61.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cCeee---ecCCcc-----ccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITP---SLKWTE-----ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~v~~---d~~d~~-----~~~~~D~Vi~~a~~~~ 154 (267)
|+++|+|+|-+|+.+|+.|.++ ||+|++++++++...+... .+... +..|++ -..++|+++-+.+-+.
T Consensus 1 m~iiIiG~G~vG~~va~~L~~~--g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~ 78 (225)
T COG0569 1 MKIIIIGAGRVGRSVARELSEE--GHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE 78 (225)
T ss_pred CEEEEECCcHHHHHHHHHHHhC--CCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence 6899999999999999999999 9999999999887655322 33333 344442 3578999997765432
Q ss_pred CCChHHHHH-HHHHHhCCCCcEEEEcCCccc
Q 024494 155 SLDYPGDVR-LAALSWNGEGSFLFTSSSAIY 184 (267)
Q Consensus 155 ~~~~~~~~~-~l~~~~~~v~r~V~~SS~~VY 184 (267)
...+. .++.+..+++++|---....|
T Consensus 79 ----~N~i~~~la~~~~gv~~viar~~~~~~ 105 (225)
T COG0569 79 ----VNSVLALLALKEFGVPRVIARARNPEH 105 (225)
T ss_pred ----HHHHHHHHHHHhcCCCcEEEEecCHHH
Confidence 11111 111222467766655443333
|
|
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0001 Score=66.74 Aligned_cols=63 Identities=21% Similarity=0.257 Sum_probs=49.9
Q ss_pred EEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 89 IVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 89 V~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|.+|..+++.|.+. ||+|++++|++++...+...++.......+...++|+||.|.+..
T Consensus 1 ~IGlG~mG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~~s~~~~~~~advVil~vp~~ 63 (288)
T TIGR01692 1 FIGLGNMGGPMAANLLKA--GHPVRVFDLFPDAVEEAVAAGAQAAASPAEAAEGADRVITMLPAG 63 (288)
T ss_pred CCcccHhHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence 479999999999999999 999999999988777666555543222224678899999999864
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0051 Score=55.42 Aligned_cols=140 Identities=16% Similarity=0.066 Sum_probs=87.6
Q ss_pred CCCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c--------CeeeecCCc----------
Q 024494 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M--------GITPSLKWT---------- 137 (267)
Q Consensus 81 ~~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~--------~v~~d~~d~---------- 137 (267)
....+.++|||+ .=||+++|++|.+. |.+|+..+|+.+...+... . .+.+|+.+.
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~--Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKA--GAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 344578999996 78999999999999 9999999999876433221 1 123344332
Q ss_pred -cc-cCCCCEEEEccCCCCCCC---------hHHH----HH-------HHH---HHhCCCCcEEEEcCCccccCCCCCcc
Q 024494 138 -EA-TQKFPYVIFCAPPSRSLD---------YPGD----VR-------LAA---LSWNGEGSFLFTSSSAIYDCSDNGAC 192 (267)
Q Consensus 138 -~~-~~~~D~Vi~~a~~~~~~~---------~~~~----~~-------~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~ 192 (267)
+. ..+.|++|+.|+...... |... ++ ..+ +...+...++++||..-+....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~---- 158 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP---- 158 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC----
Confidence 13 567999999999654321 1111 11 110 1233567899998876554311
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 193 ~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..+ ..|+.+|.+.+++.+.. + +-.+=|+.+..+-
T Consensus 159 -----~~~---~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 159 -----GSG---VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred -----CCc---ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 111 36889998888876643 2 5556677666653
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0045 Score=53.88 Aligned_cols=134 Identities=15% Similarity=0.124 Sum_probs=79.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhh---hc----cC---eeeecCC-c-----------
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDEL---IN----MG---ITPSLKW-T----------- 137 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l---~~----~~---v~~d~~d-~----------- 137 (267)
.++++||||+ +-||..++++|.++ |++|+++.|+.+. .+.+ .. .. ...|+.+ .
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALARE--GARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 4578999997 78999999999988 9999988887553 1111 11 01 1245554 3
Q ss_pred cccCCCCEEEEccCCCCC--C--C-----hHHHHH-------H---HHHHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 138 EATQKFPYVIFCAPPSRS--L--D-----YPGDVR-------L---AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 138 ~~~~~~D~Vi~~a~~~~~--~--~-----~~~~~~-------~---l~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+...+.|++|++|+.... . + +.+.+. . .+......+++|.+||...+ .....
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~-------- 152 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPG-------- 152 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCC--------
Confidence 134569999999997532 1 1 111100 0 11100001199999998765 32110
Q ss_pred CCCCCCHHHHHHHHHHHHHHH-------cC--eeEEeeCccc
Q 024494 199 VPIGRSPRTDVLLKAEKVILE-------FG--GCVLRLAGLY 231 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~-------~~--~~IlR~~~iy 231 (267)
...|+.+|.+.+...+. .+ +..+-|+.+-
T Consensus 153 ----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 153 ----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred ----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 13688899887655432 23 6778888443
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00022 Score=66.30 Aligned_cols=71 Identities=17% Similarity=0.183 Sum_probs=50.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|+|+|+ |+||+.++++|.++. | .+|+.+.|+.++...+.......++.+. +.+.++|+|||+++...
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~-gv~~lilv~R~~~rl~~La~el~~~~i~~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKT-GVAELLLVARQQERLQELQAELGGGKILSLEEALPEADIVVWVASMPK 227 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhC-CCCEEEEEcCCHHHHHHHHHHhccccHHhHHHHHccCCEEEECCcCCc
Confidence 3478999997 999999999998641 4 5899999987666554321111222222 46788999999998654
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00072 Score=61.14 Aligned_cols=68 Identities=24% Similarity=0.272 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cCee---------------ee-cCCc-cc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGIT---------------PS-LKWT-EA 139 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~v~---------------~d-~~d~-~~ 139 (267)
+++|.|+|+|.+|..++..|.+. |++|++++++++..+.+.. .++. .. ..+. +.
T Consensus 1 ~~~V~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 1 IEKLVVVGAGVMGRGIAYVFAVS--GFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred CcEEEEECccHHHHHHHHHHHhC--CCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 36899999999999999999999 9999999998776544321 0110 00 1222 46
Q ss_pred cCCCCEEEEccCCC
Q 024494 140 TQKFPYVIFCAPPS 153 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (267)
+.++|+||.|++..
T Consensus 79 ~~~aD~Vi~avpe~ 92 (288)
T PRK09260 79 VADADLVIEAVPEK 92 (288)
T ss_pred hcCCCEEEEeccCC
Confidence 78999999998743
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00034 Score=64.92 Aligned_cols=69 Identities=16% Similarity=0.139 Sum_probs=42.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhc-CCCCeEEEEeCCCCCchhhhccCeeeecCCc--cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSLKWT--EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~-~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~--~~~~~~D~Vi~~a~~ 152 (267)
|++|+|+|+ |++|+.|++.|.++ +|..++..+++.......+...+.+....|. ....++|+||.|++.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~~~~~vDvVf~A~g~ 73 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTFDFSGVDIALFSAGG 73 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHHHHcCCCEEEECCCh
Confidence 579999997 99999999999887 2333668887765433333211222222221 223577887777653
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00084 Score=56.72 Aligned_cols=87 Identities=11% Similarity=0.107 Sum_probs=54.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCe---eeecCCcc-----------ccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI---TPSLKWTE-----------ATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v---~~d~~d~~-----------~~~~~D 144 (267)
|+++|+|. |++|. +++.|.++ |++|++++|+++....+.. ..+ ..|+.|.+ .....|
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~--G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id 77 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEK--GFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD 77 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHC--cCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence 57999985 98876 99999999 9999999998765544321 112 23555531 234678
Q ss_pred EEEEccCCCCCCChHHHHHHHHHHhCCCC----cEEEEc
Q 024494 145 YVIFCAPPSRSLDYPGDVRLAALSWNGEG----SFLFTS 179 (267)
Q Consensus 145 ~Vi~~a~~~~~~~~~~~~~~l~~~~~~v~----r~V~~S 179 (267)
.+|..+-.... ..+..+ .+..+++ +||++=
T Consensus 78 ~lv~~vh~~~~----~~~~~~-~~~~gv~~~~~~~~h~~ 111 (177)
T PRK08309 78 LAVAWIHSSAK----DALSVV-CRELDGSSETYRLFHVL 111 (177)
T ss_pred EEEEeccccch----hhHHHH-HHHHccCCCCceEEEEe
Confidence 88877654321 122222 2334666 898863
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00045 Score=59.45 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=48.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-CeeeecCCcccc-CCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTEAT-QKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~d~~d~~~~-~~~D~Vi~~a~~ 152 (267)
.|+|+|+|.|.+|+++++.|.+. |++|++.+++++....+... +.... ...+.. .++|+++.|+..
T Consensus 28 gk~v~I~G~G~vG~~~A~~L~~~--G~~Vvv~D~~~~~~~~~~~~~g~~~v-~~~~l~~~~~Dv~vp~A~~ 95 (200)
T cd01075 28 GKTVAVQGLGKVGYKLAEHLLEE--GAKLIVADINEEAVARAAELFGATVV-APEEIYSVDADVFAPCALG 95 (200)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHcCCEEE-cchhhccccCCEEEecccc
Confidence 37899999999999999999999 99999999987665544332 33221 112222 379999988764
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00062 Score=61.35 Aligned_cols=68 Identities=18% Similarity=0.227 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-----------hhhccCe-e----------ee-cCCcccc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------ELINMGI-T----------PS-LKWTEAT 140 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-----------~l~~~~v-~----------~d-~~d~~~~ 140 (267)
|++|.|+|+|.+|..++..|++. |++|++++++++..+ .+.+.+. . .. ..|.+.+
T Consensus 3 ~~kI~VIG~G~mG~~ia~~la~~--g~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 80 (282)
T PRK05808 3 IQKIGVIGAGTMGNGIAQVCAVA--GYDVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITGTTDLDDL 80 (282)
T ss_pred ccEEEEEccCHHHHHHHHHHHHC--CCceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCCHHHh
Confidence 46899999999999999999999 999999999876653 1212221 0 00 1233457
Q ss_pred CCCCEEEEccCCC
Q 024494 141 QKFPYVIFCAPPS 153 (267)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (267)
.++|+||.|+++.
T Consensus 81 ~~aDlVi~av~e~ 93 (282)
T PRK05808 81 KDADLVIEAATEN 93 (282)
T ss_pred ccCCeeeeccccc
Confidence 8899999998764
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0003 Score=63.91 Aligned_cols=67 Identities=19% Similarity=0.384 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-cCC-ccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKW-TEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~~d-~~~~~~~D~Vi~~a~~ 152 (267)
.++++|+|+|.+|+.+++.|... |++|++.+|++++.......+.... ..+ .+.+.++|+||++.+.
T Consensus 151 gk~v~IiG~G~iG~avA~~L~~~--G~~V~v~~R~~~~~~~~~~~g~~~~~~~~l~~~l~~aDiVint~P~ 219 (287)
T TIGR02853 151 GSNVMVLGFGRTGMTIARTFSAL--GARVFVGARSSADLARITEMGLIPFPLNKLEEKVAEIDIVINTIPA 219 (287)
T ss_pred CCEEEEEcChHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeeecHHHHHHHhccCCEEEECCCh
Confidence 37899999999999999999999 9999999998765443333344322 222 2456799999998854
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00016 Score=57.94 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=42.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.+||-|+|+|.+|.+|++.|.+. ||+|.++ +|+.+..+.....--.....+. +....+|+||.+++.+
T Consensus 10 ~l~I~iIGaGrVG~~La~aL~~a--g~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd 79 (127)
T PF10727_consen 10 RLKIGIIGAGRVGTALARALARA--GHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD 79 (127)
T ss_dssp --EEEEECTSCCCCHHHHHHHHT--TSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC
T ss_pred ccEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH
Confidence 38999999999999999999999 9999887 4655444333221001112222 4678899999987554
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0024 Score=51.89 Aligned_cols=70 Identities=19% Similarity=0.158 Sum_probs=50.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c----cC--eeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N----MG--ITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~----~~--v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+ |.+|++++..|..+.-..|+..+++++++..... . .. ......+.+.++++|+||.+++..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 68999998 9999999999998822358999999865443221 0 11 112224557899999999999965
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 81 ~ 81 (141)
T PF00056_consen 81 R 81 (141)
T ss_dssp S
T ss_pred c
Confidence 4
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0016 Score=58.91 Aligned_cols=67 Identities=18% Similarity=0.244 Sum_probs=49.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee------------cCCcc-ccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS------------LKWTE-ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d------------~~d~~-~~~~~D~Vi~~a~ 151 (267)
|||+|+|+|.+|..++..|.+. |++|+.++| +++.+.+.+.++... ..+.+ ....+|+||.|..
T Consensus 1 mkI~IiG~G~iG~~~a~~L~~~--g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk 77 (305)
T PRK12921 1 MRIAVVGAGAVGGTFGGRLLEA--GRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVK 77 (305)
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEec
Confidence 6899999999999999999999 999999999 655555544343221 11222 2478999999987
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
...
T Consensus 78 ~~~ 80 (305)
T PRK12921 78 AYQ 80 (305)
T ss_pred ccC
Confidence 543
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0002 Score=57.73 Aligned_cols=70 Identities=26% Similarity=0.308 Sum_probs=52.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhhhc-c---Ceee-ecCCc-cccCCCCEEEEccCCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELIN-M---GITP-SLKWT-EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l~~-~---~v~~-d~~d~-~~~~~~D~Vi~~a~~~~~ 155 (267)
.++++|+|+|-.|+.++..|.+. |.+ |+.+.|+.++...+.+ . .+.. .+.+. +.+.++|+||++.+....
T Consensus 12 ~~~vlviGaGg~ar~v~~~L~~~--g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~~~~ 88 (135)
T PF01488_consen 12 GKRVLVIGAGGAARAVAAALAAL--GAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLEEALQEADIVINATPSGMP 88 (135)
T ss_dssp TSEEEEESSSHHHHHHHHHHHHT--TSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHCHHHHTESEEEE-SSTTST
T ss_pred CCEEEEECCHHHHHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHHHHHhhCCeEEEecCCCCc
Confidence 48999999999999999999999 886 9999999888766643 1 2222 23333 356789999999886543
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00039 Score=63.30 Aligned_cols=66 Identities=21% Similarity=0.317 Sum_probs=49.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|.|.+|..+++.|++. ||+|++.+|++. .+.+...+........+...++|+||.|.+..
T Consensus 1 m~Ig~IGlG~MG~~ma~~L~~~--G~~v~v~~~~~~-~~~~~~~g~~~~~s~~~~~~~advVi~~v~~~ 66 (292)
T PRK15059 1 MKLGFIGLGIMGTPMAINLARA--GHQLHVTTIGPV-ADELLSLGAVSVETARQVTEASDIIFIMVPDT 66 (292)
T ss_pred CeEEEEccCHHHHHHHHHHHHC--CCeEEEEeCCHh-HHHHHHcCCeecCCHHHHHhcCCEEEEeCCCh
Confidence 4799999999999999999999 999999998864 34444445433222224567899999998754
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00049 Score=64.21 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=45.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-hh---cc-----------CeeeecCCccccCCCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-LI---NM-----------GITPSLKWTEATQKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-l~---~~-----------~v~~d~~d~~~~~~~D~V 146 (267)
||+||+|+|+ |++|+.|++.|.+. |..+++++.+++..... +. .. .......+++.+.++|+|
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~-p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~DvV 80 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANH-PWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEAVDDVDIV 80 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcC-CCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHHhcCCCEE
Confidence 4589999995 99999999999875 57799988555433221 11 01 011112234445789999
Q ss_pred EEccCCC
Q 024494 147 IFCAPPS 153 (267)
Q Consensus 147 i~~a~~~ 153 (267)
|.+.+..
T Consensus 81 f~a~p~~ 87 (349)
T PRK08664 81 FSALPSD 87 (349)
T ss_pred EEeCChh
Confidence 8876553
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0011 Score=64.32 Aligned_cols=69 Identities=19% Similarity=0.215 Sum_probs=51.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----Ceeee-cCCc-c---ccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPS-LKWT-E---ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~d-~~d~-~---~~~~~D~Vi~~a~~~~ 154 (267)
|.+|.|+|.|.+|+.+++.|.++ ||+|++.+|++++.+.+.+. +.... ..++ + .++++|+|+.++.+..
T Consensus 1 ~~~IgvIGLG~MG~~lA~nL~~~--G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~~~s~~e~v~~l~~~d~Iil~v~~~~ 78 (470)
T PTZ00142 1 MSDIGLIGLAVMGQNLALNIASR--GFKISVYNRTYEKTEEFVKKAKEGNTRVKGYHTLEELVNSLKKPRKVILLIKAGE 78 (470)
T ss_pred CCEEEEEeEhHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHhhhhcCCcceecCCHHHHHhcCCCCCEEEEEeCChH
Confidence 56899999999999999999999 99999999998887666432 32211 2232 2 2346899999977653
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00045 Score=63.02 Aligned_cols=67 Identities=21% Similarity=0.357 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-cCC-ccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKW-TEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~~d-~~~~~~~D~Vi~~a~~ 152 (267)
.++++|+|+|.+|+.++..|... |.+|++.+|++++.......+.... ..+ .+.+.++|+||++++.
T Consensus 152 g~kvlViG~G~iG~~~a~~L~~~--Ga~V~v~~r~~~~~~~~~~~G~~~~~~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 152 GSNVLVLGFGRTGMTLARTLKAL--GANVTVGARKSAHLARITEMGLSPFHLSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeeecHHHHHHHhCCCCEEEECCCh
Confidence 47999999999999999999999 9999999999765444444454432 122 2456789999999754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0084 Score=54.81 Aligned_cols=133 Identities=17% Similarity=0.242 Sum_probs=82.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-------CeeeecCCcc-------------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------GITPSLKWTE-------------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-------~v~~d~~d~~-------------~~~~~ 143 (267)
+-|||||| --+|..||++|.++ |++|++-.-+++..+.+... -+..|+++++ .-.+.
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~--Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKK--GFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhc--CCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 56999999 77899999999999 99999988776665554321 1334555431 12357
Q ss_pred CEEEEccCCCC---CCC------hHHHHH-------HHH---H--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSR---SLD------YPGDVR-------LAA---L--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~---~~~------~~~~~~-------~l~---~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
-.|||+||... .++ |...++ .+. + -....+|+|++||.. |.- +. |.
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~--GR~---------~~-p~- 174 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVL--GRV---------AL-PA- 174 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccc--cCc---------cC-cc-
Confidence 79999999542 222 221111 111 1 112357999999965 321 11 11
Q ss_pred CCHHHHHHHHHHHH-------HHHcC--eeEEeeCccccC
Q 024494 203 RSPRTDVLLKAEKV-------ILEFG--GCVLRLAGLYIS 233 (267)
Q Consensus 203 ~~~y~~~k~~aE~~-------l~~~~--~~IlR~~~iyGp 233 (267)
..+|..+|.+.|.. +..+| +.|+-|| ++-.
T Consensus 175 ~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T 213 (322)
T KOG1610|consen 175 LGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT 213 (322)
T ss_pred cccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence 24688888888865 33456 7889988 4433
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00032 Score=75.91 Aligned_cols=69 Identities=12% Similarity=0.108 Sum_probs=55.6
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.++++|.++|.|.+|.++++.|++. |++|++++|++++...+...+... ..++ +...++|+||.|.+..
T Consensus 322 ~~~~~IGfIGlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~Ga~~-~~s~~e~~~~aDvVi~~V~~~ 391 (1378)
T PLN02858 322 KPVKRIGFIGLGAMGFGMASHLLKS--NFSVCGYDVYKPTLVRFENAGGLA-GNSPAEVAKDVDVLVIMVANE 391 (1378)
T ss_pred cCCCeEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCee-cCCHHHHHhcCCEEEEecCCh
Confidence 3568999999999999999999999 999999999988777666555443 2233 4677899999998743
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0006 Score=65.16 Aligned_cols=66 Identities=17% Similarity=0.251 Sum_probs=51.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCC---c----c-ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKW---T----E-ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d---~----~-~~~~~D~Vi~~a~~ 152 (267)
|+|+|+|+|.+|+.+++.|.++ |++|+++++++++.+.+.. .++.....| . + .+.++|.||.+.+.
T Consensus 1 m~viIiG~G~ig~~~a~~L~~~--g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~ 75 (453)
T PRK09496 1 MKIIIVGAGQVGYTLAENLSGE--NNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDS 75 (453)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCC
Confidence 5899999999999999999999 9999999999887766543 455443332 2 1 25789999888654
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00057 Score=61.93 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=50.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh--hccCeeeec-CC--ccccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL--INMGITPSL-KW--TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l--~~~~v~~d~-~d--~~~~~~~D~Vi~~a~~~~ 154 (267)
++++|+|+|.|.||+.+++.|.++ |+.|.++.++....... ...++.... .+ .....++|+||.+++...
T Consensus 2 ~~~~v~IvG~GliG~s~a~~l~~~--g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aD~VivavPi~~ 76 (279)
T COG0287 2 ASMKVGIVGLGLMGGSLARALKEA--GLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEA 76 (279)
T ss_pred CCcEEEEECCchHHHHHHHHHHHc--CCeEEEEeecCcHHHHHHHhhcCcccccccchhhhhcccCCEEEEeccHHH
Confidence 458999999999999999999999 99987777765543221 123443332 22 245678999999998653
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0019 Score=58.41 Aligned_cols=67 Identities=19% Similarity=0.207 Sum_probs=49.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----------cCee-----------ee-cCCccccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGIT-----------PS-LKWTEATQ 141 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----------~~v~-----------~d-~~d~~~~~ 141 (267)
++|.|+|+|.+|..++..|+.. |++|+.++++++..+.... .+.. .. ..+.+.+.
T Consensus 5 ~kI~vIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 82 (292)
T PRK07530 5 KKVGVIGAGQMGNGIAHVCALA--GYDVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARISTATDLEDLA 82 (292)
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEeeCCHHHhc
Confidence 7899999999999999999999 9999999998765543210 1110 01 12234567
Q ss_pred CCCEEEEccCCC
Q 024494 142 KFPYVIFCAPPS 153 (267)
Q Consensus 142 ~~D~Vi~~a~~~ 153 (267)
++|+||.|++..
T Consensus 83 ~aD~Vieavpe~ 94 (292)
T PRK07530 83 DCDLVIEAATED 94 (292)
T ss_pred CCCEEEEcCcCC
Confidence 999999998654
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0015 Score=59.28 Aligned_cols=68 Identities=16% Similarity=0.106 Sum_probs=50.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-----------hhccCee-e-----------ecCCcccc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGIT-P-----------SLKWTEAT 140 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-----------l~~~~v~-~-----------d~~d~~~~ 140 (267)
+++|.|+|+|.+|..++..|+.. |++|+.++++++..+. +...+.. . ...|.+.+
T Consensus 5 ~~~V~ViGaG~mG~~iA~~~a~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 82 (286)
T PRK07819 5 IQRVGVVGAGQMGAGIAEVCARA--GVDVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRFTTDLGDF 82 (286)
T ss_pred ccEEEEEcccHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEeeCCHHHh
Confidence 46899999999999999999999 9999999999876543 2211211 0 01233467
Q ss_pred CCCCEEEEccCCC
Q 024494 141 QKFPYVIFCAPPS 153 (267)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (267)
.++|+||-|+...
T Consensus 83 ~~~d~ViEav~E~ 95 (286)
T PRK07819 83 ADRQLVIEAVVED 95 (286)
T ss_pred CCCCEEEEecccC
Confidence 8999999997543
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0013 Score=56.77 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=52.8
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----CeeeecCCc-----------cccCCCCEEE
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT-----------EATQKFPYVI 147 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~v~~d~~d~-----------~~~~~~D~Vi 147 (267)
.+||||| +.-||..|++++.+. |.+|+...|+.++..+.... ...+|+.|. +.....+++|
T Consensus 6 nTiLITGG~sGIGl~lak~f~el--gN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 6 NTILITGGASGIGLALAKRFLEL--GNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cEEEEeCCcchhhHHHHHHHHHh--CCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 6899997 467999999999999 99999999998776554321 233455553 2346789999
Q ss_pred EccCCCCC
Q 024494 148 FCAPPSRS 155 (267)
Q Consensus 148 ~~a~~~~~ 155 (267)
++||....
T Consensus 84 NNAGIqr~ 91 (245)
T COG3967 84 NNAGIQRN 91 (245)
T ss_pred ecccccch
Confidence 99998753
|
|
| >COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0018 Score=60.80 Aligned_cols=68 Identities=22% Similarity=0.410 Sum_probs=52.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC--e-eeec----------------CCccccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG--I-TPSL----------------KWTEATQKFP 144 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~--v-~~d~----------------~d~~~~~~~D 144 (267)
.++|.|+|.||+|..++-.+.++ |++|+++|-++.+.+.+..-. + ++++ .|++.+..+|
T Consensus 9 ~~~I~ViGLGYVGLPlA~~fA~~--G~~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lraTtd~~~l~~~d 86 (436)
T COG0677 9 SATIGVIGLGYVGLPLAAAFASA--GFKVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRATTDPEELKECD 86 (436)
T ss_pred ceEEEEEccccccHHHHHHHHHc--CCceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceEecChhhcccCC
Confidence 37899999999999999999999 999999999887776654211 1 1111 2334567999
Q ss_pred EEEEccCCC
Q 024494 145 YVIFCAPPS 153 (267)
Q Consensus 145 ~Vi~~a~~~ 153 (267)
+++.|++..
T Consensus 87 v~iI~VPTP 95 (436)
T COG0677 87 VFIICVPTP 95 (436)
T ss_pred EEEEEecCC
Confidence 999999843
|
|
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00036 Score=62.65 Aligned_cols=67 Identities=18% Similarity=0.331 Sum_probs=49.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCCCchhhhcc--CeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINM--GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~~~~~l~~~--~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|+.+++.|.+. | ++|++++|++++...+... ++.......+.+.++|+||.|+.+.
T Consensus 1 m~I~iIG~G~mG~ala~~L~~~--g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav~p~ 73 (273)
T PRK07680 1 MNIGFIGTGNMGTILIEAFLES--GAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICVKPL 73 (273)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEecCHH
Confidence 4799999999999999999988 7 3799999987766554331 3433222224567899999998643
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00065 Score=54.86 Aligned_cols=66 Identities=15% Similarity=0.257 Sum_probs=51.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCc--cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWT--EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~--~~~~~~D~Vi~~a~~~ 153 (267)
++|+++|+| .|..++..|.+. |++|+++|.++...+...+.++.. |+.++ +.-.++|.|+-+=++.
T Consensus 18 ~kileIG~G-fG~~vA~~L~~~--G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~ 88 (134)
T PRK04148 18 KKIVELGIG-FYFKVAKKLKES--GFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPR 88 (134)
T ss_pred CEEEEEEec-CCHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCH
Confidence 689999999 999999999999 999999999988766555555544 44444 4568999998775553
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00096 Score=62.11 Aligned_cols=36 Identities=22% Similarity=0.195 Sum_probs=30.4
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
||+||+|+|+ |++|+.+++.|.+. |+++++++.++.
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~-p~~elv~v~~~~ 37 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNH-PEVEIVAVTSRS 37 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcC-CCceEEEEECcc
Confidence 5789999997 99999999999875 689988877643
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.00046 Score=64.89 Aligned_cols=66 Identities=18% Similarity=0.280 Sum_probs=47.4
Q ss_pred EEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc----cCe---eeecCCc----cccCCCCEEEEccCCC
Q 024494 87 LLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN----MGI---TPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 87 ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~----~~v---~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
|+|+|+|++|+.+++.|.++. ++ +|++.+|+.++.+.+.. ..+ ..|+.|. +.+.++|+||+|+++.
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~-~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRG-PFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTT-CE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcCcHHHHHHHHHHhcCC-CCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 789999999999999999983 34 89999999888665532 233 3355554 3578999999999986
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0038 Score=56.95 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhh----cc----C--eeee-cCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----NM----G--ITPS-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~----~~----~--v~~d-~~d~~~~~~~D~Vi~~a~ 151 (267)
||||.|+|+|.+|..++..|... |. +|+.++++++...... .. + .... ..|.+.+.++|+||.+++
T Consensus 2 ~~KI~VIGaG~vG~~ia~~la~~--~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGAGNVGATLAHLLALK--ELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYEDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHHHHCCCCEEEECCC
Confidence 68999999999999999999988 75 9999999776543211 10 1 1111 123356889999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
...
T Consensus 80 ~p~ 82 (307)
T PRK06223 80 VPR 82 (307)
T ss_pred CCC
Confidence 543
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00081 Score=61.65 Aligned_cols=67 Identities=16% Similarity=0.316 Sum_probs=48.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-ccc-CCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~-~~~D~Vi~~a~~~ 153 (267)
.+|+|.|+|+|.+|+.+++.|.+. |++|+++++++.. ......++.. ..+. +.. .++|+||.|+++.
T Consensus 35 ~~~kI~IIG~G~mG~slA~~L~~~--G~~V~~~d~~~~~-~~a~~~gv~~-~~~~~e~~~~~aDvVilavp~~ 103 (304)
T PLN02256 35 RKLKIGIVGFGNFGQFLAKTFVKQ--GHTVLATSRSDYS-DIAAELGVSF-FRDPDDFCEEHPDVVLLCTSIL 103 (304)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECccHH-HHHHHcCCee-eCCHHHHhhCCCCEEEEecCHH
Confidence 347999999999999999999998 9999999998632 2222234432 2232 223 4699999998864
|
|
| >KOG0409 consensus Predicted dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0006 Score=61.80 Aligned_cols=68 Identities=18% Similarity=0.223 Sum_probs=57.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+++|-.+|.|..|++++.+|++. ||.|++.+|+.++..++.+.|.+..-.-.+..+.+|+||-+.+..
T Consensus 35 ~~~iGFIGLG~MG~~M~~nLik~--G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~ 102 (327)
T KOG0409|consen 35 KTRIGFIGLGNMGSAMVSNLIKA--GYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNP 102 (327)
T ss_pred cceeeEEeeccchHHHHHHHHHc--CCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCCh
Confidence 58999999999999999999999 999999999998888887777664333235678899999988754
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00068 Score=61.32 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=33.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
+++|.|+|+|.+|..++..|... |++|+.++++++..
T Consensus 3 ~~kIaViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~l 39 (287)
T PRK08293 3 IKNVTVAGAGVLGSQIAFQTAFH--GFDVTIYDISDEAL 39 (287)
T ss_pred ccEEEEECCCHHHHHHHHHHHhc--CCeEEEEeCCHHHH
Confidence 37899999999999999999999 99999999987654
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0025 Score=57.81 Aligned_cols=68 Identities=16% Similarity=0.187 Sum_probs=49.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-----------hhccCe------------eeecCCcccc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMGI------------TPSLKWTEAT 140 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-----------l~~~~v------------~~d~~d~~~~ 140 (267)
+++|.|+|+|.+|..++..|+.. |++|++++++++..+. +.+.+. .....+.+.+
T Consensus 4 ~~~V~vIG~G~mG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (295)
T PLN02545 4 IKKVGVVGAGQMGSGIAQLAAAA--GMDVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNLEEL 81 (295)
T ss_pred cCEEEEECCCHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCHHHh
Confidence 36899999999999999999999 9999999998765432 111111 0011233467
Q ss_pred CCCCEEEEccCCC
Q 024494 141 QKFPYVIFCAPPS 153 (267)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (267)
.++|+||-|+...
T Consensus 82 ~~aD~Vieav~e~ 94 (295)
T PLN02545 82 RDADFIIEAIVES 94 (295)
T ss_pred CCCCEEEEcCccC
Confidence 8999999998643
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.00066 Score=55.04 Aligned_cols=64 Identities=20% Similarity=0.312 Sum_probs=47.4
Q ss_pred EEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC-------------c-cccCCCCEEEEccCC
Q 024494 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-------------T-EATQKFPYVIFCAPP 152 (267)
Q Consensus 87 ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d-------------~-~~~~~~D~Vi~~a~~ 152 (267)
|+|+|+|-||..++..|.+. |++|+.++|.+ ..+.+...++.....+ + .....+|+||.|.-.
T Consensus 1 I~I~G~GaiG~~~a~~L~~~--g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa 77 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQA--GHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKA 77 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHT--TCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSG
T ss_pred CEEECcCHHHHHHHHHHHHC--CCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEecc
Confidence 78999999999999999998 99999999988 5555554454432111 1 245789999999754
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 78 ~ 78 (151)
T PF02558_consen 78 Y 78 (151)
T ss_dssp G
T ss_pred c
Confidence 3
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.005 Score=56.65 Aligned_cols=70 Identities=16% Similarity=0.156 Sum_probs=46.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHh-cCCCCeEEEEeCCCCCc---hhhhccC--eeee---cCC-ccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHH---DELINMG--ITPS---LKW-TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~-~~pG~~V~~l~R~~~~~---~~l~~~~--v~~d---~~d-~~~~~~~D~Vi~~a~~~ 153 (267)
|||+|+|+ |.+|++++..|.. ..-+++++.++|++... -++...+ .... ..| .+.+.++|+||.|+|..
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG~~ 80 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAGVA 80 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCCCC
Confidence 78999998 9999999988854 21156889999875431 1121111 1111 123 25678999999999975
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 81 ~ 81 (312)
T PRK05086 81 R 81 (312)
T ss_pred C
Confidence 4
|
|
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0007 Score=61.09 Aligned_cols=69 Identities=14% Similarity=0.240 Sum_probs=48.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCCC-chhhhc-c-CeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADH-HDELIN-M-GITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~~-~~~l~~-~-~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|++|.|+|+|.+|+.++..|.+. | ++|++++|++.. ...+.. . ++.......+...++|+||.|+++..
T Consensus 1 m~~I~iIG~G~mG~ala~~L~~~--g~~~~~~V~~~~r~~~~~~~~l~~~~~~~~~~~~~~e~~~~aDvVilavpp~~ 76 (277)
T PRK06928 1 MEKIGFIGYGSMADMIATKLLET--EVATPEEIILYSSSKNEHFNQLYDKYPTVELADNEAEIFTKCDHSFICVPPLA 76 (277)
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCCcccEEEEeCCcHHHHHHHHHHcCCeEEeCCHHHHHhhCCEEEEecCHHH
Confidence 67899999999999999999988 7 789999986532 222221 1 12211122235678999999988653
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0011 Score=51.35 Aligned_cols=63 Identities=22% Similarity=0.319 Sum_probs=49.8
Q ss_pred EEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecC---Cc-----cccCCCCEEEEccC
Q 024494 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK---WT-----EATQKFPYVIFCAP 151 (267)
Q Consensus 87 ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~---d~-----~~~~~~D~Vi~~a~ 151 (267)
|+|+|.|.+|+.+++.|.+. +++|++++++++....+...++..... ++ ..+.+++.|+.+..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~--~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEG--GIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHT--TSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEcCCHHHHHHHHHHHhC--CCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccC
Confidence 68999999999999999998 889999999998877777667655433 33 24578999988765
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.00055 Score=56.51 Aligned_cols=67 Identities=15% Similarity=0.206 Sum_probs=47.9
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee--------e----e-cCCc-cccCCCCEEEEccC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT--------P----S-LKWT-EATQKFPYVIFCAP 151 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~--------~----d-~~d~-~~~~~~D~Vi~~a~ 151 (267)
||.|+|+|-.|.+++..|.++ |++|+.++|+++..+.+...+.+ . . ..|. ++++++|+|+.+.+
T Consensus 1 KI~ViGaG~~G~AlA~~la~~--g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADN--GHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHC--TEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEECcCHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence 689999999999999999999 99999999987665554432111 0 1 1333 46789999998887
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
...
T Consensus 79 s~~ 81 (157)
T PF01210_consen 79 SQA 81 (157)
T ss_dssp GGG
T ss_pred HHH
Confidence 653
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0013 Score=55.06 Aligned_cols=67 Identities=13% Similarity=0.200 Sum_probs=46.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhccC-----eeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
+.++|+|+ |.||+.+++.|.++ |++|++++|+.+.... +...+ +..|+.+. +...+.
T Consensus 17 k~~lVTGa~~GIG~aia~~l~~~--G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 17 KVAIVTGGGIGIGRNTALLLAKQ--GAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CEEEEecCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 67899996 89999999999999 9999999987654322 11111 22344432 123568
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|++||+||..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 9999998854
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0015 Score=61.77 Aligned_cols=69 Identities=14% Similarity=0.073 Sum_probs=50.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|..- |.+|++.+|.....+.....++... .+. +.+..+|+|+.+.+...
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~f--G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~lPlt~ 260 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPF--DVKLHYTDRHRLPEEVEQELGLTYH-VSFDSLVSVCDVVTIHCPLHP 260 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCCchhhHhhcCceec-CCHHHHhhcCCEEEEcCCCCH
Confidence 348899999999999999999998 9999999997633222222333321 122 46789999998887653
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0012 Score=60.42 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=41.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|+|.|+|+|.+|+++++.|.+. ||+|++.+|++... + .+...++|+||.+.+.
T Consensus 5 m~I~iiG~G~~G~~lA~~l~~~--G~~V~~~~r~~~~~--~-----------~~~~~~advvi~~vp~ 57 (308)
T PRK14619 5 KTIAILGAGAWGSTLAGLASAN--GHRVRVWSRRSGLS--L-----------AAVLADADVIVSAVSM 57 (308)
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCEEEEEeCCCCCC--H-----------HHHHhcCCEEEEECCh
Confidence 7899999999999999999999 99999999975421 0 0234567777777653
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.021 Score=52.35 Aligned_cols=32 Identities=19% Similarity=0.206 Sum_probs=27.6
Q ss_pred CCeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 84 ENDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 84 m~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.+.+||||+ .=||.++++.|.++ |.+|+. .|+
T Consensus 9 gk~alITGa~~s~GIG~a~A~~la~~--Ga~Vv~-~~~ 43 (303)
T PLN02730 9 GKRAFIAGVADDNGYGWAIAKALAAA--GAEILV-GTW 43 (303)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEE-EeC
Confidence 377999997 66999999999999 999988 443
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0013 Score=59.31 Aligned_cols=70 Identities=23% Similarity=0.300 Sum_probs=51.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhcc-C----eeeecCCccccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM-G----ITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~-~----v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
..++++|+|+|-+|+.++..|.+. | .+|++++|+.++...+.+. . +.......+.+.++|+||++.+...
T Consensus 122 ~~k~vlVlGaGg~a~ai~~aL~~~--g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivInaTp~g~ 197 (278)
T PRK00258 122 KGKRILILGAGGAARAVILPLLDL--GVAEITIVNRTVERAEELAKLFGALGKAELDLELQEELADFDLIINATSAGM 197 (278)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhccceeecccchhccccCCEEEECCcCCC
Confidence 347899999999999999999999 8 7999999998776555321 1 1111111245678999999987553
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.00094 Score=64.20 Aligned_cols=66 Identities=20% Similarity=0.337 Sum_probs=49.4
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-ccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+|+|+| +|.+|+.+++.|.+. |++|++++|+++....+. ..++.. ..+. +.+.++|+||.|+++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~--G~~V~v~~r~~~~~~~~a~~~gv~~-~~~~~e~~~~aDvVIlavp~~ 69 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEK--GFEVIVTGRDPKKGKEVAKELGVEY-ANDNIDAAKDADIVIISVPIN 69 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHcCCee-ccCHHHHhccCCEEEEecCHH
Confidence 5899997 799999999999999 999999999876543322 234432 1222 4567899999998764
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0015 Score=60.64 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=50.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|... |.+|++.+|.+.... ....++.. .+. +.+.++|+|+.+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~-~~~~~~~~--~~l~ell~~aDiV~l~lP~t~ 216 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGF--GMRILYYSRTRKPEA-EKELGAEY--RPLEELLRESDFVSLHVPLTK 216 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCChhh-HHHcCCEe--cCHHHHHhhCCEEEEeCCCCh
Confidence 348999999999999999999999 999999999764322 11223322 222 46789999999987654
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0067 Score=55.85 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=50.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhh----cc-----CeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELI----NM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~----~~-----~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.+|..++-.|... |. ++..++++.+...... .. .+.....+.+.++++|+||.+++..
T Consensus 7 ~ki~iiGaG~vG~~~a~~l~~~--~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~~~~~adivIitag~~ 84 (315)
T PRK00066 7 NKVVLVGDGAVGSSYAYALVNQ--GIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYSDCKDADLVVITAGAP 84 (315)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHHHhCCCCEEEEecCCC
Confidence 6999999999999999999988 76 8999999876543221 10 1111123335789999999999975
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
+
T Consensus 85 ~ 85 (315)
T PRK00066 85 Q 85 (315)
T ss_pred C
Confidence 4
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0068 Score=55.56 Aligned_cols=68 Identities=16% Similarity=0.132 Sum_probs=50.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhccC-----eeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LINMG-----ITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~~~-----v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|..++..|..+ | .+|..+++++++... +.... ......|.+.+.++|+||.+++..
T Consensus 1 mkI~IIGaG~VG~~~a~~l~~~--g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~d~~~l~~aDiViita~~~ 78 (308)
T cd05292 1 MKVAIVGAGFVGSTTAYALLLR--GLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAGDYADCKGADVVVITAGAN 78 (308)
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeCCHHHhCCCCEEEEccCCC
Confidence 5899999999999999999998 8 689999998765432 22110 111113445789999999999965
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 79 ~ 79 (308)
T cd05292 79 Q 79 (308)
T ss_pred C
Confidence 3
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0035 Score=57.96 Aligned_cols=68 Identities=15% Similarity=0.211 Sum_probs=49.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-----------ccCeee--------ecCCc-cccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----------NMGITP--------SLKWT-EATQKF 143 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-----------~~~v~~--------d~~d~-~~~~~~ 143 (267)
.++|.|+|+|.+|..++..++.. |++|+.++++++..+... +.+... ...+. +++.++
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~a--G~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~a 84 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAH--GLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADA 84 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCC
Confidence 37899999999999999999999 999999999876443211 111110 01222 467899
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|.|+-+++..
T Consensus 85 DlViEavpE~ 94 (321)
T PRK07066 85 DFIQESAPER 94 (321)
T ss_pred CEEEECCcCC
Confidence 9999987654
|
|
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0031 Score=57.71 Aligned_cols=67 Identities=12% Similarity=0.189 Sum_probs=48.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec-------------CCccccCCCCEEEEcc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL-------------KWTEATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~-------------~d~~~~~~~D~Vi~~a 150 (267)
+|+|+|+|+|-||..++..|.+. |++|+.+.|++. +.+...++.... .+++....+|+||.|.
T Consensus 5 ~m~I~IiG~GaiG~~lA~~L~~~--g~~V~~~~r~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 80 (313)
T PRK06249 5 TPRIGIIGTGAIGGFYGAMLARA--GFDVHFLLRSDY--EAVRENGLQVDSVHGDFHLPPVQAYRSAEDMPPCDWVLVGL 80 (313)
T ss_pred CcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeCCH--HHHHhCCeEEEeCCCCeeecCceEEcchhhcCCCCEEEEEe
Confidence 37999999999999999999999 999999999753 233333432210 1123456789999997
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
....
T Consensus 81 K~~~ 84 (313)
T PRK06249 81 KTTA 84 (313)
T ss_pred cCCC
Confidence 6543
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0082 Score=55.36 Aligned_cols=70 Identities=17% Similarity=0.151 Sum_probs=50.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchh--h--hc----cCe--eee-cCCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDE--L--IN----MGI--TPS-LKWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~--l--~~----~~v--~~d-~~d~~~~~~~D~Vi~~a 150 (267)
..+||.|+|+|.+|+.++..|... | .+|..+|.+++.... + .. .+. ... ..|.+.+.++|+||.++
T Consensus 4 ~~~KI~IIGaG~vG~~ia~~l~~~--~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l~~ADiVVita 81 (319)
T PTZ00117 4 KRKKISMIGAGQIGSTVALLILQK--NLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDIKDSDVVVITA 81 (319)
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC--CCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHhCCCCEEEECC
Confidence 347999999999999999999888 7 689999998765322 1 10 011 111 13446789999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+...
T Consensus 82 g~~~ 85 (319)
T PTZ00117 82 GVQR 85 (319)
T ss_pred CCCC
Confidence 8654
|
|
| >PRK06476 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0006 Score=60.63 Aligned_cols=66 Identities=12% Similarity=0.136 Sum_probs=47.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCe---EEEEeCCCCCchhhhcc--CeeeecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ---IYGQTMTADHHDELINM--GITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~---V~~l~R~~~~~~~l~~~--~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|+.+++.|++. |++ |.+.+|++++...+... ++... .+. +...++|+||.|..+.
T Consensus 1 m~IgiIG~G~mG~aia~~L~~~--g~~~~~i~v~~r~~~~~~~l~~~~~~~~~~-~~~~~~~~~aDvVilav~p~ 72 (258)
T PRK06476 1 MKIGFIGTGAITEAMVTGLLTS--PADVSEIIVSPRNAQIAARLAERFPKVRIA-KDNQAVVDRSDVVFLAVRPQ 72 (258)
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCChheEEEECCCHHHHHHHHHHcCCceEe-CCHHHHHHhCCEEEEEeCHH
Confidence 4799999999999999999988 754 46777877766555432 23322 232 3457899999998864
|
|
| >PLN02712 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0016 Score=65.88 Aligned_cols=67 Identities=16% Similarity=0.331 Sum_probs=49.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccC-CCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQ-KFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~-~~D~Vi~~a~~~ 153 (267)
.+|+|.|+|+|.+|+.+++.|.+. |++|++++|+... ......++.. ..+. +... .+|+||.|.++.
T Consensus 368 ~~~kIgIIGlG~mG~slA~~L~~~--G~~V~~~dr~~~~-~~a~~~Gv~~-~~~~~el~~~~aDvVILavP~~ 436 (667)
T PLN02712 368 SKLKIAIVGFGNFGQFLAKTMVKQ--GHTVLAYSRSDYS-DEAQKLGVSY-FSDADDLCEEHPEVILLCTSIL 436 (667)
T ss_pred CCCEEEEEecCHHHHHHHHHHHHC--cCEEEEEECChHH-HHHHHcCCeE-eCCHHHHHhcCCCEEEECCChH
Confidence 458999999999999999999998 9999999998542 2223345432 2232 2233 589999998864
|
|
| >PRK07634 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0012 Score=57.84 Aligned_cols=68 Identities=15% Similarity=0.379 Sum_probs=46.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC---e-EEEEeCC-CCCchhhhc-cCeeeecCCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC---Q-IYGQTMT-ADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~---~-V~~l~R~-~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
+||.|+|+|.+|..++..|.+. ++ + |++.+|+ +++...+.. .++.......+.++++|+||.+.++..
T Consensus 5 ~kI~iIG~G~mg~ala~~l~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiViiavp~~~ 78 (245)
T PRK07634 5 HRILFIGAGRMAEAIFSGLLKT--SKEYIEEIIVSNRSNVEKLDQLQARYNVSTTTDWKQHVTSVDTIVLAMPPSA 78 (245)
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCCcCeEEEECCCCHHHHHHHHHHcCcEEeCChHHHHhcCCEEEEecCHHH
Confidence 6899999999999999999887 52 3 6677774 444444432 344322222245678999999987653
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0078 Score=55.25 Aligned_cols=68 Identities=19% Similarity=0.165 Sum_probs=47.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeCCC--CCchhhh----c----cC--eeeec-CCccccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTA--DHHDELI----N----MG--ITPSL-KWTEATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R~~--~~~~~l~----~----~~--v~~d~-~d~~~~~~~D~Vi~ 148 (267)
|||.|+|+ |.+|..++..|... |+ +|+.++|++ ++..... . .+ ..... .|.+.+.++|+||.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~--g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~~l~~aDiVii 78 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKE--DVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLSDVAGSDIVII 78 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHHHhCCCCEEEE
Confidence 68999997 99999999999998 76 599999954 3221111 0 11 11111 23456899999999
Q ss_pred ccCCCC
Q 024494 149 CAPPSR 154 (267)
Q Consensus 149 ~a~~~~ 154 (267)
+++...
T Consensus 79 tag~p~ 84 (309)
T cd05294 79 TAGVPR 84 (309)
T ss_pred ecCCCC
Confidence 999543
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0042 Score=56.25 Aligned_cols=37 Identities=19% Similarity=0.369 Sum_probs=33.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~ 123 (267)
++|.|+|+|.+|..++..|... |++|++++++++..+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~--G~~V~l~d~~~~~l~ 40 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFART--GYDVTIVDVSEEILK 40 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhc--CCeEEEEeCCHHHHH
Confidence 6899999999999999999999 999999999876543
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0013 Score=59.07 Aligned_cols=69 Identities=17% Similarity=0.242 Sum_probs=46.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEE-EEeCCCCCchhhhc-cCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIY-GQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~-~l~R~~~~~~~l~~-~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
||||.|+|+|.+|+.+++.|.+..+++++. +.+|++++...+.+ .+.. ...+. +.+.++|+|+.|+++.
T Consensus 1 mmrIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~-~~~~~~ell~~~DvVvi~a~~~ 72 (265)
T PRK13304 1 MLKIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAK-ACLSIDELVEDVDLVVECASVN 72 (265)
T ss_pred CCEEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCe-eECCHHHHhcCCCEEEEcCChH
Confidence 579999999999999999998762246654 56677665544432 2222 12232 2347899999998654
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0019 Score=57.81 Aligned_cols=66 Identities=14% Similarity=0.086 Sum_probs=47.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----c--ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----E--ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~--~~~~~D~Vi~~a~~~ 153 (267)
|+|||+|. |. |+.|+++|.++ ||+|++.++++.....+...+.. ....|. + .-.++|+||+++.|.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~--g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf 76 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQ--GIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPF 76 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhC--CCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH
Confidence 67999975 99 99999999999 99999999998765544443322 222222 1 235699999998764
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0055 Score=58.54 Aligned_cols=67 Identities=18% Similarity=0.167 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--Ceee---ecCCc-----cccCCCCEEEEccC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITP---SLKWT-----EATQKFPYVIFCAP 151 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--~v~~---d~~d~-----~~~~~~D~Vi~~a~ 151 (267)
.+++|+|+|+|.+|+.+++.|.+. |++|++++++++....+... ++.. |..++ ..+.++|+||.+.+
T Consensus 230 ~~~~iiIiG~G~~g~~l~~~L~~~--~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 230 PVKRVMIVGGGNIGYYLAKLLEKE--GYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence 468999999999999999999999 99999999998876655432 3333 33333 24568999886654
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0036 Score=59.88 Aligned_cols=67 Identities=22% Similarity=0.296 Sum_probs=49.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cc----hhhhccCeeeecCCc--cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD-HH----DELINMGITPSLKWT--EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~-~~----~~l~~~~v~~d~~d~--~~~~~~D~Vi~~a~~~ 153 (267)
++|+|+|+|.+|..+++.|+++ |++|++.+++.. .. .++...++.....+. +...++|+||++++..
T Consensus 6 k~v~iiG~g~~G~~~A~~l~~~--G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 6 KKVLVVGAGVSGLALAKFLKKL--GAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEEFLEGVDLVVVSPGVP 79 (450)
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence 7899999988999999999999 999999999752 22 223333555433332 2346799999998864
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.002 Score=67.74 Aligned_cols=71 Identities=18% Similarity=0.223 Sum_probs=52.5
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCe-------------EEEEeCCCCCchhhhc-c-C---eeeecCCcc----c
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQ-------------IYGQTMTADHHDELIN-M-G---ITPSLKWTE----A 139 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~-------------V~~l~R~~~~~~~l~~-~-~---v~~d~~d~~----~ 139 (267)
..|++|+|+|+|++|+..++.|.+. |+.+ |++.+++.+....+.. . + +..|..|.+ .
T Consensus 567 ~~~~rIlVLGAG~VG~~~a~~La~~-~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~ 645 (1042)
T PLN02819 567 KKSQNVLILGAGRVCRPAAEYLASV-KTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKY 645 (1042)
T ss_pred ccCCcEEEECCCHHHHHHHHHHHhC-cCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHh
Confidence 3468999999999999999999876 4555 8888888766655432 1 3 345566642 3
Q ss_pred cCCCCEEEEccCCC
Q 024494 140 TQKFPYVIFCAPPS 153 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (267)
+.++|+||.|.++.
T Consensus 646 v~~~DaVIsalP~~ 659 (1042)
T PLN02819 646 VSQVDVVISLLPAS 659 (1042)
T ss_pred hcCCCEEEECCCch
Confidence 46799999999874
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0018 Score=55.05 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=49.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCeee---ecCCc----cccCCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITP---SLKWT----EATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~~---d~~d~----~~~~~~D~Vi~~a 150 (267)
.++++|+|+ |.+|+.+++.|.++ |++|+.++|+.++...+.. .+... +..+. +.+.++|+||++.
T Consensus 28 ~~~vlVlGgtG~iG~~~a~~l~~~--g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 28 GKTAVVLGGTGPVGQRAAVLLARE--GARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 378999995 99999999999999 9999999998766544322 11211 22232 3567899999877
Q ss_pred CCC
Q 024494 151 PPS 153 (267)
Q Consensus 151 ~~~ 153 (267)
+..
T Consensus 106 ~~g 108 (194)
T cd01078 106 AAG 108 (194)
T ss_pred CCC
Confidence 644
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.003 Score=58.74 Aligned_cols=69 Identities=13% Similarity=0.166 Sum_probs=41.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhc-CCCCeEEEEeCCCCCchhhhccCeeeecC--CccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSLK--WTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~-~pG~~V~~l~R~~~~~~~l~~~~v~~d~~--d~~~~~~~D~Vi~~a~~ 152 (267)
|++|.|+|+ |++|+.|++.|.++ +|..++..+.........+...+...++. +...+.++|+||.+++.
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~~~l~~~~~~~~~~~~vD~vFla~p~ 76 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAGKNLRVREVDSFDFSQVQLAFFAAGA 76 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCCcceEEeeCChHHhcCCCEEEEcCCH
Confidence 479999997 99999999999975 34445555544322211121112222222 22234788988888764
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0022 Score=57.76 Aligned_cols=70 Identities=21% Similarity=0.341 Sum_probs=47.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEE-EeCCCCCchhhhc-cCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~-l~R~~~~~~~l~~-~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
+++|.|+|+|.||+.+++.|.+..|+++|.+ .+|++++...+.. .+......+. +.+.++|+|+.|++..
T Consensus 6 ~irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~~~~eell~~~D~Vvi~tp~~ 78 (271)
T PRK13302 6 ELRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPVVPLDQLATHADIVVEAAPAS 78 (271)
T ss_pred eeEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCcccCCHHHHhcCCCEEEECCCcH
Confidence 3789999999999999999987334888874 5666665544332 2321112232 2456799999998764
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0028 Score=60.02 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=49.9
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
..-++|.|+|.|.||+.+++.|..- |.+|++.+|.....+.....++... .+. +.+.++|+|+.+.+..
T Consensus 197 L~gktVGIVG~G~IG~~vA~~L~af--G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~sDvV~l~lPlt 266 (386)
T PLN03139 197 LEGKTVGTVGAGRIGRLLLQRLKPF--NCNLLYHDRLKMDPELEKETGAKFE-EDLDAMLPKCDVVVINTPLT 266 (386)
T ss_pred CCCCEEEEEeecHHHHHHHHHHHHC--CCEEEEECCCCcchhhHhhcCceec-CCHHHHHhhCCEEEEeCCCC
Confidence 3448999999999999999999998 9999999987543322222343321 122 4668899999887754
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0051 Score=60.03 Aligned_cols=68 Identities=24% Similarity=0.225 Sum_probs=52.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----Ceee--ecCCc----cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITP--SLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~--d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
+++|-++|.|.+|+.+++.|+++ |++|++.+|++++.+.+.+. |... ...++ +.++++|+||.|.+..
T Consensus 6 ~~~IG~IGLG~MG~~mA~nL~~~--G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~~a~s~~e~v~~l~~~dvIi~~v~~~ 83 (493)
T PLN02350 6 LSRIGLAGLAVMGQNLALNIAEK--GFPISVYNRTTSKVDETVERAKKEGNLPLYGFKDPEDFVLSIQKPRSVIILVKAG 83 (493)
T ss_pred CCCEEEEeeHHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHhhhhcCCcccccCCCHHHHHhcCCCCCEEEEECCCc
Confidence 57899999999999999999999 99999999998887766542 3321 11222 2345699999998654
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0097 Score=55.04 Aligned_cols=67 Identities=15% Similarity=0.174 Sum_probs=45.6
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCC-------CeEEEEeCCC--CCchhhh----cc------CeeeecCCccccCCCCE
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPG-------CQIYGQTMTA--DHHDELI----NM------GITPSLKWTEATQKFPY 145 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG-------~~V~~l~R~~--~~~~~l~----~~------~v~~d~~d~~~~~~~D~ 145 (267)
||.|+|+ |.+|+.++..|..+ + +++..+++++ +...... .. +......+.+.++++|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~--~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDi 79 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASG--ELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVITTDPEEAFKDVDV 79 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhC--CccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEecChHHHhCCCCE
Confidence 7999998 99999999999875 4 3589999876 4322111 00 01111122367899999
Q ss_pred EEEccCCCC
Q 024494 146 VIFCAPPSR 154 (267)
Q Consensus 146 Vi~~a~~~~ 154 (267)
||++||..+
T Consensus 80 VVitAG~~~ 88 (323)
T cd00704 80 AILVGAFPR 88 (323)
T ss_pred EEEeCCCCC
Confidence 999999754
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.014 Score=53.88 Aligned_cols=68 Identities=15% Similarity=0.092 Sum_probs=49.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCch--hhh--c----cC--eeeec-CCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHD--ELI--N----MG--ITPSL-KWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~--~l~--~----~~--v~~d~-~d~~~~~~~D~Vi~~a~ 151 (267)
++||.|+|+|.+|..++..+... |. +|+.++.+++... .+. . .+ .+... .|.+.+.++|+||.+++
T Consensus 6 ~~KI~IIGaG~vG~~ia~~la~~--gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~~d~~~l~~aDiVI~tag 83 (321)
T PTZ00082 6 RRKISLIGSGNIGGVMAYLIVLK--NLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGTNNYEDIAGSDVVIVTAG 83 (321)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEECCCHHHhCCCCEEEECCC
Confidence 47999999999999999999888 85 8999999877432 111 0 11 12221 44467899999999998
Q ss_pred CC
Q 024494 152 PS 153 (267)
Q Consensus 152 ~~ 153 (267)
..
T Consensus 84 ~~ 85 (321)
T PTZ00082 84 LT 85 (321)
T ss_pred CC
Confidence 64
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.002 Score=60.31 Aligned_cols=67 Identities=18% Similarity=0.289 Sum_probs=48.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--Ceeeec-CCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSL-KWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--~v~~d~-~d~-~~~~~~D~Vi~~a~~~ 153 (267)
++|.|+|+|.+|..++..|.+. |++|.+++++++........ ++.... .+. +...++|+||.|+++.
T Consensus 1 ~~I~iIG~GliG~siA~~L~~~--G~~v~i~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~aDlVilavP~~ 71 (359)
T PRK06545 1 RTVLIVGLGLIGGSLALAIKAA--GPDVFIIGYDPSAAQLARALGFGVIDELAADLQRAAAEADLIVLAVPVD 71 (359)
T ss_pred CeEEEEEeCHHHHHHHHHHHhc--CCCeEEEEeCCCHHHHHHHhcCCCCcccccCHHHHhcCCCEEEEeCCHH
Confidence 4699999999999999999999 99999999887654322222 221111 222 3568899999999875
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.022 Score=51.82 Aligned_cols=71 Identities=20% Similarity=0.268 Sum_probs=52.9
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhccC----eeeecCCc-----------cccC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~~~----v~~d~~d~-----------~~~~ 141 (267)
+....|||||+ +-+|+.++.+++++ |..+...|.+.+...+ ..+.| ..+|+.+. +...
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r--g~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR--GAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh--CCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 34478999998 57999999999999 9999999998765433 22222 44566553 2456
Q ss_pred CCCEEEEccCCCC
Q 024494 142 KFPYVIFCAPPSR 154 (267)
Q Consensus 142 ~~D~Vi~~a~~~~ 154 (267)
++|++|+.||...
T Consensus 114 ~V~ILVNNAGI~~ 126 (300)
T KOG1201|consen 114 DVDILVNNAGIVT 126 (300)
T ss_pred CceEEEecccccc
Confidence 8999999999654
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0029 Score=56.49 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=44.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEE-EeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~-l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+||.|+|+ |.+|+.+++.+.+. |+.+|.+ ++++++........++. ...|. +.+.++|+|+.+..|.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~-~~~elvav~d~~~~~~~~~~~~~i~-~~~dl~~ll~~~DvVid~t~p~ 71 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAA-EDLELVAAVDRPGSPLVGQGALGVA-ITDDLEAVLADADVLIDFTTPE 71 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCccccccCCCCcc-ccCCHHHhccCCCEEEECCCHH
Confidence 579999998 99999999988765 4788877 45555443222111221 12332 2345799999888654
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0027 Score=56.98 Aligned_cols=68 Identities=21% Similarity=0.266 Sum_probs=49.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----C-eeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----G-ITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~-v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
.++++|+|+|-+|++++..|.+. |++|++++|++++..++.+. + +.....+.....++|+||+|.+..
T Consensus 117 ~k~vliiGaGg~g~aia~~L~~~--g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivInatp~g 189 (270)
T TIGR00507 117 NQRVLIIGAGGAARAVALPLLKA--DCNVIIANRTVSKAEELAERFQRYGEIQAFSMDELPLHRVDLIINATSAG 189 (270)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhcCceEEechhhhcccCccEEEECCCCC
Confidence 47899999999999999999999 99999999987766544321 1 111111112345799999999865
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0024 Score=60.86 Aligned_cols=66 Identities=14% Similarity=0.100 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
-++|+|+|+|.||+.+++.++.. |.+|+++++++.+.......|+..... .+.+.++|+||.|.+.
T Consensus 202 GktVvViG~G~IG~~va~~ak~~--Ga~ViV~d~d~~R~~~A~~~G~~~~~~-~e~v~~aDVVI~atG~ 267 (413)
T cd00401 202 GKVAVVAGYGDVGKGCAQSLRGQ--GARVIVTEVDPICALQAAMEGYEVMTM-EEAVKEGDIFVTTTGN 267 (413)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEECChhhHHHHHhcCCEEccH-HHHHcCCCEEEECCCC
Confidence 47899999999999999999999 999999999887765544456543211 2456789999988763
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0049 Score=56.57 Aligned_cols=69 Identities=23% Similarity=0.339 Sum_probs=51.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCeee-ecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITP-SLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v~~-d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|-+|+.+++.|... | .+|++++|++++...+.. .+... +..+. +.+.++|+||.|.+...
T Consensus 178 ~~~V~ViGaG~iG~~~a~~L~~~--g~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVi~at~~~~ 250 (311)
T cd05213 178 GKKVLVIGAGEMGELAAKHLAAK--GVAEITIANRTYERAEELAKELGGNAVPLDELLELLNEADVVISATGAPH 250 (311)
T ss_pred CCEEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHcCCeEEeHHHHHHHHhcCCEEEECCCCCc
Confidence 48899999999999999999986 5 689999999876655432 23322 11222 35678999999988654
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.003 Score=57.72 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=48.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeee---------c--CCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPS---------L--KWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d---------~--~d~~~~~~~D~Vi~~a~ 151 (267)
.|||+|+|+|-||..++-.|.+. |++|+.++|..++.+.+.+ .|+... . .+++....+|+||.|.-
T Consensus 2 ~m~I~IiGaGaiG~~~a~~L~~~--G~~V~lv~r~~~~~~~i~~~~Gl~i~~~g~~~~~~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 2 SMTWHILGAGSLGSLWACRLARA--GLPVRLILRDRQRLAAYQQAGGLTLVEQGQASLYAIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred CceEEEECCCHHHHHHHHHHHhC--CCCeEEEEechHHHHHHhhcCCeEEeeCCcceeeccCCCCcccccccCEEEEECC
Confidence 37899999999999999999999 9999999998655544432 233221 0 11123457899998875
Q ss_pred C
Q 024494 152 P 152 (267)
Q Consensus 152 ~ 152 (267)
.
T Consensus 80 ~ 80 (305)
T PRK05708 80 A 80 (305)
T ss_pred H
Confidence 4
|
|
| >PLN02858 fructose-bisphosphate aldolase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0019 Score=70.15 Aligned_cols=67 Identities=12% Similarity=0.106 Sum_probs=55.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++|.++|.|.+|..+++.|++. ||+|++++|++++.+.+...|....-.-.+...++|+||.|++..
T Consensus 5 ~~IGfIGLG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~Ga~~~~s~~e~a~~advVi~~l~~~ 71 (1378)
T PLN02858 5 GVVGFVGLDSLSFELASSLLRS--GFKVQAFEISTPLMEKFCELGGHRCDSPAEAAKDAAALVVVLSHP 71 (1378)
T ss_pred CeEEEEchhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEEcCCh
Confidence 6799999999999999999999 999999999998887777666543222224667899999998654
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0028 Score=58.51 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=49.6
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
.-++|.|+|.|.+|+++++.|++. |++|++.+|.....+.....++... +. ++++.+|+|+.+.+.
T Consensus 15 kgKtVGIIG~GsIG~amA~nL~d~--G~~ViV~~r~~~s~~~A~~~G~~v~--sl~Eaak~ADVV~llLPd 81 (335)
T PRK13403 15 QGKTVAVIGYGSQGHAQAQNLRDS--GVEVVVGVRPGKSFEVAKADGFEVM--SVSEAVRTAQVVQMLLPD 81 (335)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHC--cCEEEEEECcchhhHHHHHcCCEEC--CHHHHHhcCCEEEEeCCC
Confidence 348899999999999999999999 9999998876433322223355432 33 567899999998874
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.017 Score=52.97 Aligned_cols=68 Identities=13% Similarity=0.137 Sum_probs=47.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhh----hcc----Ce--eeec-CCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----INM----GI--TPSL-KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l----~~~----~v--~~d~-~d~~~~~~~D~Vi~~a~~ 152 (267)
|||.|+|+|++|..++..|... |+ +|+.++..++..... ... .. .... .|.+.+.++|+||.+++.
T Consensus 2 ~KV~VIGaG~vG~~iA~~la~~--g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGAGFVGATTAFRLAEK--ELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYADTANSDIVVITAGL 79 (305)
T ss_pred CEEEEECcCHHHHHHHHHHHHc--CCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHHhCCCCEEEEcCCC
Confidence 6899999999999999999998 76 899999865533211 000 01 1111 333457899999999995
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 80 p~ 81 (305)
T TIGR01763 80 PR 81 (305)
T ss_pred CC
Confidence 43
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0058 Score=51.41 Aligned_cols=100 Identities=18% Similarity=0.120 Sum_probs=54.3
Q ss_pred eEEEEc-ccHHhHHHHHHHHhcCCCC-eEEEEeCCCC-Cc------hhhhccCee-----eecCCcc-----------cc
Q 024494 86 DLLIVG-PGVLGRLVAEQWRQEHPGC-QIYGQTMTAD-HH------DELINMGIT-----PSLKWTE-----------AT 140 (267)
Q Consensus 86 ~ILV~G-aG~IG~~La~~L~~~~pG~-~V~~l~R~~~-~~------~~l~~~~v~-----~d~~d~~-----------~~ 140 (267)
.+||+| .|-||..+++.|.++ +. +|+.+.|++. .. .++...+.+ +|+.|++ ..
T Consensus 2 tylitGG~gglg~~la~~La~~--~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~ 79 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAER--GARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF 79 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--T-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred EEEEECCccHHHHHHHHHHHHc--CCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc
Confidence 478997 599999999999999 64 7999999831 11 122333433 3555541 22
Q ss_pred CCCCEEEEccCCCCCC----C----h-------HHHHHHHHHH--hCCCCcEEEEcCCc-cccCC
Q 024494 141 QKFPYVIFCAPPSRSL----D----Y-------PGDVRLAALS--WNGEGSFLFTSSSA-IYDCS 187 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~----~----~-------~~~~~~l~~~--~~~v~r~V~~SS~~-VYg~~ 187 (267)
...+.|||+++..... . + +.++.++... ....+.||.+||.. ++|..
T Consensus 80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~ 144 (181)
T PF08659_consen 80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGP 144 (181)
T ss_dssp S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-T
T ss_pred CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCc
Confidence 4678999999865321 1 1 1112233222 23578899999876 56654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0052 Score=57.25 Aligned_cols=33 Identities=21% Similarity=0.356 Sum_probs=29.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R 117 (267)
|+||.|.|+|.||+.+++.+.++ |+.+|.++..
T Consensus 1 ~ikVaI~G~GrIGr~va~al~~~-~d~eLvav~d 33 (341)
T PRK04207 1 MIKVGVNGYGTIGKRVADAVAAQ-PDMELVGVAK 33 (341)
T ss_pred CeEEEEECCCHHHHHHHHHHhcC-CCcEEEEEEC
Confidence 57999999999999999998876 6889988765
|
|
| >PRK05479 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.003 Score=58.55 Aligned_cols=68 Identities=16% Similarity=0.142 Sum_probs=50.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh-hccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-INMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l-~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
..++|.|+|.|.+|.++++.|++. |++|++..|+..+.... ...++... ...+...++|+|+.++++.
T Consensus 16 ~gktIgIIG~GsmG~AlA~~L~~s--G~~Vvv~~r~~~~s~~~A~~~G~~~~-s~~eaa~~ADVVvLaVPd~ 84 (330)
T PRK05479 16 KGKKVAIIGYGSQGHAHALNLRDS--GVDVVVGLREGSKSWKKAEADGFEVL-TVAEAAKWADVIMILLPDE 84 (330)
T ss_pred CCCEEEEEeeHHHHHHHHHHHHHC--CCEEEEEECCchhhHHHHHHCCCeeC-CHHHHHhcCCEEEEcCCHH
Confidence 448899999999999999999999 99999887764433222 22354432 2235678899999999864
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.0028 Score=62.71 Aligned_cols=67 Identities=24% Similarity=0.307 Sum_probs=53.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee---cCCcc-----ccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS---LKWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d---~~d~~-----~~~~~D~Vi~~a~~ 152 (267)
..+|+|+|+|.+|+.++++|.++ |++|++++.++++.+.+++.+.... ..|++ ..+++|+|+.+.+.
T Consensus 417 ~~hiiI~G~G~~G~~la~~L~~~--g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 417 CNHALLVGYGRVGSLLGEKLLAA--GIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCCEEEECCChHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCC
Confidence 37899999999999999999999 9999999999988877766665544 34432 35688988776543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.048 Score=49.80 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=28.5
Q ss_pred CCeEEEEccc---HHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 84 ENDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 84 m~~ILV~GaG---~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.+.++|||+| =||+++++.|.++ |++|++.++.
T Consensus 8 gk~alITGa~~~~GIG~a~A~~la~~--Ga~Vvv~~~~ 43 (299)
T PRK06300 8 GKIAFIAGIGDDQGYGWGIAKALAEA--GATILVGTWV 43 (299)
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHC--CCEEEEEecc
Confidence 3679999985 7999999999999 9999987643
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0035 Score=60.00 Aligned_cols=66 Identities=14% Similarity=0.104 Sum_probs=49.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
.++|+|+|+|.||+.+++.|+.. |.+|++.++++.+.......|+... .-.+.+.++|+||.+.+.
T Consensus 212 Gk~VlViG~G~IG~~vA~~lr~~--Ga~ViV~d~dp~ra~~A~~~G~~v~-~l~eal~~aDVVI~aTG~ 277 (425)
T PRK05476 212 GKVVVVAGYGDVGKGCAQRLRGL--GARVIVTEVDPICALQAAMDGFRVM-TMEEAAELGDIFVTATGN 277 (425)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCchhhHHHHhcCCEec-CHHHHHhCCCEEEECCCC
Confidence 37899999999999999999999 9999999998876533333344322 112356789999988653
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0028 Score=52.77 Aligned_cols=66 Identities=14% Similarity=0.156 Sum_probs=44.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++++|+|.|.+|+.+|+.|+.. |.+|+++..+|-+.-+-...|++.... .+++..+|++|.+.+..
T Consensus 24 k~vvV~GYG~vG~g~A~~lr~~--Ga~V~V~e~DPi~alqA~~dGf~v~~~-~~a~~~adi~vtaTG~~ 89 (162)
T PF00670_consen 24 KRVVVIGYGKVGKGIARALRGL--GARVTVTEIDPIRALQAAMDGFEVMTL-EEALRDADIFVTATGNK 89 (162)
T ss_dssp SEEEEE--SHHHHHHHHHHHHT--T-EEEEE-SSHHHHHHHHHTT-EEE-H-HHHTTT-SEEEE-SSSS
T ss_pred CEEEEeCCCcccHHHHHHHhhC--CCEEEEEECChHHHHHhhhcCcEecCH-HHHHhhCCEEEECCCCc
Confidence 7899999999999999999999 999999999876543322345554321 24678899988887754
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >TIGR00465 ilvC ketol-acid reductoisomerase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0034 Score=57.82 Aligned_cols=66 Identities=17% Similarity=0.195 Sum_probs=49.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++|.|+|+|.+|.++++.|++. |++|++..+.. +....+.+.++... .+.+..+++|+|+.++++.
T Consensus 4 kkIgiIG~G~mG~AiA~~L~~s--G~~Viv~~~~~~~~~~~a~~~Gv~~~-s~~ea~~~ADiVvLaVpp~ 70 (314)
T TIGR00465 4 KTVAIIGYGSQGHAQALNLRDS--GLNVIVGLRKGGASWKKATEDGFKVG-TVEEAIPQADLIMNLLPDE 70 (314)
T ss_pred CEEEEEeEcHHHHHHHHHHHHC--CCeEEEEECcChhhHHHHHHCCCEEC-CHHHHHhcCCEEEEeCCcH
Confidence 7899999999999999999999 99987665543 33333334455432 2234678899999999875
|
This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway |
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0039 Score=57.38 Aligned_cols=67 Identities=16% Similarity=0.152 Sum_probs=48.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|.|+|.|.||+.+++.|..- |++|++++|.++..+.... . ....+. +.+.++|+|+.+.+...
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~af--G~~V~~~~~~~~~~~~~~~--~-~~~~~l~e~l~~aDvvv~~lPlt~ 202 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTW--GFPLRCWSRSRKSWPGVQS--F-AGREELSAFLSQTRVLINLLPNTP 202 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCCCCCCCcee--e-cccccHHHHHhcCCEEEECCCCCH
Confidence 347999999999999999999998 9999999987654321111 0 011122 46789999999987654
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0064 Score=52.93 Aligned_cols=127 Identities=19% Similarity=0.106 Sum_probs=79.6
Q ss_pred cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc----hhhhc-cC---eeeecCCc-----------ccc-CCCCEEEEccCC
Q 024494 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELIN-MG---ITPSLKWT-----------EAT-QKFPYVIFCAPP 152 (267)
Q Consensus 93 G~IG~~La~~L~~~~pG~~V~~l~R~~~~~----~~l~~-~~---v~~d~~d~-----------~~~-~~~D~Vi~~a~~ 152 (267)
+-||++++++|+++ |++|++++|+.++. .++.. .+ +..|+.++ +.. .+.|++||+++.
T Consensus 6 ~GiG~aia~~l~~~--Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~ 83 (241)
T PF13561_consen 6 SGIGRAIARALAEE--GANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI 83 (241)
T ss_dssp SHHHHHHHHHHHHT--TEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred CChHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence 57999999999999 99999999997752 22221 22 33455443 245 789999999986
Q ss_pred CCC----CCh----HHHHHH---------------HHHHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 153 SRS----LDY----PGDVRL---------------AALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 153 ~~~----~~~----~~~~~~---------------l~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
... .++ .+.... +.......+++|++||....... |. ...|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~------------~~-~~~y~~s 150 (241)
T PF13561_consen 84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM------------PG-YSAYSAS 150 (241)
T ss_dssp CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS------------TT-THHHHHH
T ss_pred cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC------------cc-chhhHHH
Confidence 543 111 111111 10111123689999987543211 11 3478999
Q ss_pred HHHHHHHHHH--------cC--eeEEeeCccccCC
Q 024494 210 LLKAEKVILE--------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~--------~~--~~IlR~~~iyGp~ 234 (267)
|.+.|.+.+. .+ +-.+.|+.+..+.
T Consensus 151 Kaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~ 185 (241)
T PF13561_consen 151 KAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPM 185 (241)
T ss_dssp HHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHH
T ss_pred HHHHHHHHHHHHHHhccccCeeeeeecccceeccc
Confidence 9888877654 23 6678898888654
|
... |
| >PRK06436 glycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0065 Score=55.70 Aligned_cols=65 Identities=26% Similarity=0.317 Sum_probs=47.9
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|..- |.+|++.+|+.... ++.....+. +.+.++|+|+.+.+...
T Consensus 120 L~gktvgIiG~G~IG~~vA~~l~af--G~~V~~~~r~~~~~------~~~~~~~~l~ell~~aDiv~~~lp~t~ 185 (303)
T PRK06436 120 LYNKSLGILGYGGIGRRVALLAKAF--GMNIYAYTRSYVND------GISSIYMEPEDIMKKSDFVLISLPLTD 185 (303)
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCccc------CcccccCCHHHHHhhCCEEEECCCCCc
Confidence 3448999999999999999998888 99999999874321 111111222 45788999999888654
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0036 Score=58.02 Aligned_cols=65 Identities=17% Similarity=0.258 Sum_probs=48.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|+|.||+.+++.|... |++|++.+|++...... .. ...+. +.+.++|+|+.+.+...
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~--G~~V~~~d~~~~~~~~~----~~-~~~~l~ell~~aDiVil~lP~t~ 210 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGF--GATITAYDAYPNKDLDF----LT-YKDSVKEAIKDADIISLHVPANK 210 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCChhHhhhh----hh-ccCCHHHHHhcCCEEEEeCCCcH
Confidence 347899999999999999999998 99999999986542211 11 11122 46789999998887653
|
|
| >PRK08605 D-lactate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0054 Score=56.87 Aligned_cols=66 Identities=15% Similarity=0.200 Sum_probs=47.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHH-hcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~-~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|. .. |.+|++.++++... .. ..+.. ..+. +.+.++|+|+.+++...
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~~--g~~V~~~d~~~~~~--~~-~~~~~-~~~l~ell~~aDvIvl~lP~t~ 212 (332)
T PRK08605 145 KDLKVAVIGTGRIGLAVAKIFAKGY--GSDVVAYDPFPNAK--AA-TYVDY-KDTIEEAVEGADIVTLHMPATK 212 (332)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcC--CCEEEEECCCccHh--HH-hhccc-cCCHHHHHHhCCEEEEeCCCCc
Confidence 3479999999999999999994 45 89999998876432 11 11211 1222 46789999999987654
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0034 Score=57.72 Aligned_cols=67 Identities=13% Similarity=0.194 Sum_probs=47.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--Cee------e----ec-CCc-ccc-CCCCEEEEc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GIT------P----SL-KWT-EAT-QKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--~v~------~----d~-~d~-~~~-~~~D~Vi~~ 149 (267)
|+|.|+|+|-+|..++..|.+. |++|+.++|+++..+.+... +.. . .. .+. +.+ ..+|+||.+
T Consensus 1 MkI~IiGaGa~G~ala~~L~~~--g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dliiia 78 (326)
T PRK14620 1 MKISILGAGSFGTAIAIALSSK--KISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCIILA 78 (326)
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEEEEE
Confidence 5799999999999999999999 99999999976544433321 111 0 01 122 233 578999998
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
..+.
T Consensus 79 vks~ 82 (326)
T PRK14620 79 VPTQ 82 (326)
T ss_pred eCHH
Confidence 8664
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0035 Score=58.30 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=38.9
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeE---EEEeCCCCCchhhhccCeeeecCC--ccccCCCCEEEEccCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQI---YGQTMTADHHDELINMGITPSLKW--TEATQKFPYVIFCAPP 152 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V---~~l~R~~~~~~~l~~~~v~~d~~d--~~~~~~~D~Vi~~a~~ 152 (267)
+|+|+|+ |++|+.|++.|.++ +|.+ ..+.+.......+...+.+..+.| .+.+.++|+||.|++.
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~--~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~~~~~~~~D~v~~a~g~ 71 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEER--NFPIDKLVLLASDRSAGRKVTFKGKELEVNEAKIESFEGIDIALFSAGG 71 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhC--CCChhhEEEEeccccCCCeeeeCCeeEEEEeCChHHhcCCCEEEECCCH
Confidence 5899996 99999999999887 6654 444465433322222222222221 2234667777777653
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.005 Score=58.63 Aligned_cols=66 Identities=17% Similarity=0.110 Sum_probs=48.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
..++|+|+|+|.||+.+++.+... |.+|+++++++.+.......|+..... .+.+.++|+||.+.+
T Consensus 194 ~Gk~VvViG~G~IG~~vA~~ak~~--Ga~ViV~d~dp~r~~~A~~~G~~v~~l-eeal~~aDVVItaTG 259 (406)
T TIGR00936 194 AGKTVVVAGYGWCGKGIAMRARGM--GARVIVTEVDPIRALEAAMDGFRVMTM-EEAAKIGDIFITATG 259 (406)
T ss_pred CcCEEEEECCCHHHHHHHHHHhhC--cCEEEEEeCChhhHHHHHhcCCEeCCH-HHHHhcCCEEEECCC
Confidence 347999999999999999999999 999999999886643333334433211 235678899887765
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.013 Score=57.40 Aligned_cols=66 Identities=15% Similarity=0.224 Sum_probs=49.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh-----------hccC-------------eeeecCCcccc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INMG-------------ITPSLKWTEAT 140 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l-----------~~~~-------------v~~d~~d~~~~ 140 (267)
++|.|+|+|.+|..++..|+.. |++|+..+++++..+.. ...| +.. ..+.+.+
T Consensus 8 ~~V~VIGaG~MG~gIA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~-~~~~~~~ 84 (507)
T PRK08268 8 ATVAVIGAGAMGAGIAQVAAQA--GHTVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP-VEALADL 84 (507)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE-eCCHHHh
Confidence 6899999999999999999999 99999999998765441 2222 111 1233456
Q ss_pred CCCCEEEEccCCC
Q 024494 141 QKFPYVIFCAPPS 153 (267)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (267)
.++|+||-++...
T Consensus 85 ~~aDlViEav~E~ 97 (507)
T PRK08268 85 ADCDLVVEAIVER 97 (507)
T ss_pred CCCCEEEEcCccc
Confidence 7999999988654
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.016 Score=56.83 Aligned_cols=94 Identities=14% Similarity=0.087 Sum_probs=61.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-c--CC--------------c---------
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-L--KW--------------T--------- 137 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~--~d--------------~--------- 137 (267)
..+|+|+|+|.+|...+..++.. |.+|+++++++++.+..+..|.+.. + .+ .
T Consensus 165 g~kVlViGaG~iGL~Ai~~Ak~l--GA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 165 PAKVLVIGAGVAGLAAIGAAGSL--GAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 47999999999999999999999 9999999999887766555665421 1 10 0
Q ss_pred -cccCCCCEEEEccCCCCCCChHHH-HHHHHHHhCCCCcEEEEcC
Q 024494 138 -EATQKFPYVIFCAPPSRSLDYPGD-VRLAALSWNGEGSFLFTSS 180 (267)
Q Consensus 138 -~~~~~~D~Vi~~a~~~~~~~~~~~-~~~l~~~~~~v~r~V~~SS 180 (267)
+...++|+||.|++......- .. .+..+........+|.++.
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP-~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAP-KLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred HhccCCCCEEEECCCCCcccCc-chHHHHHHHhcCCCCEEEEEcc
Confidence 012579999999986432110 11 1222222223456777764
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0042 Score=58.51 Aligned_cols=55 Identities=25% Similarity=0.273 Sum_probs=43.4
Q ss_pred CCCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.+++|.|+| .|.+|..++..|.+. |++|++++|++.. +. +...++|+||.|++..
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~--G~~V~~~d~~~~~--------------~~~~~~~~aDlVilavP~~ 153 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLS--GYQVRILEQDDWD--------------RAEDILADAGMVIVSVPIH 153 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHC--CCeEEEeCCCcch--------------hHHHHHhcCCEEEEeCcHH
Confidence 348899998 899999999999999 9999999986321 11 2356788888888754
|
|
| >COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0035 Score=56.39 Aligned_cols=68 Identities=16% Similarity=0.268 Sum_probs=53.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCCCchhhh-ccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELI-NMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~~~~~l~-~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
||+|.++|+|.+|++++.-|++. | .+|++.+|++++...+. +.++.. ..|. +...++|+||.+.-|..
T Consensus 1 ~~~IgfIG~G~Mg~Ai~~gl~~~--g~~~~~~I~v~~~~~e~~~~l~~~~g~~~-~~~~~~~~~~advv~LavKPq~ 74 (266)
T COG0345 1 MMKIGFIGAGNMGEAILSGLLKS--GALPPEEIIVTNRSEEKRAALAAEYGVVT-TTDNQEAVEEADVVFLAVKPQD 74 (266)
T ss_pred CceEEEEccCHHHHHHHHHHHhc--CCCCcceEEEeCCCHHHHHHHHHHcCCcc-cCcHHHHHhhCCEEEEEeChHh
Confidence 58999999999999999999999 7 68999999988775333 345553 3332 56788999999988753
|
|
| >TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.012 Score=57.20 Aligned_cols=65 Identities=17% Similarity=0.262 Sum_probs=49.9
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc---C--eeeecCCc----cccCCCCEEEEccCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---G--ITPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~---~--v~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
+|.|+|.|.+|..+++.|+++ |++|++.+|++++.+.+.+. + +.. ..++ +.++++|+|+.|+++.
T Consensus 1 ~IG~IGLG~MG~~mA~nL~~~--G~~V~v~drt~~~~~~l~~~~~~g~~~~~-~~s~~e~v~~l~~~dvIil~v~~~ 74 (467)
T TIGR00873 1 DIGVIGLAVMGSNLALNMADH--GFTVSVYNRTPEKTDEFLAEHAKGKKIVG-AYSIEEFVQSLERPRKIMLMVKAG 74 (467)
T ss_pred CEEEEeeHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHhhccCCCCcee-cCCHHHHHhhcCCCCEEEEECCCc
Confidence 378999999999999999999 99999999998887766543 1 221 1222 2446799999998774
|
This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.035 Score=51.08 Aligned_cols=68 Identities=19% Similarity=0.106 Sum_probs=49.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhh----hcc----C-eeeec-CCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM----G-ITPSL-KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l----~~~----~-v~~d~-~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|+|+|.+|..++-.|... |. ++..++.+++..... ... . ..... .|.+.+.++|+||.+++.
T Consensus 4 ~Ki~IiGaG~VG~~~a~~l~~~--~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~~~~~adivvitaG~ 81 (312)
T cd05293 4 NKVTVVGVGQVGMACAISILAK--GLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYSVTANSKVVIVTAGA 81 (312)
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHHHhCCCCEEEECCCC
Confidence 6999999999999999999887 64 799999877644321 111 0 11121 455678999999999996
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 82 ~~ 83 (312)
T cd05293 82 RQ 83 (312)
T ss_pred CC
Confidence 54
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0046 Score=63.08 Aligned_cols=67 Identities=16% Similarity=0.321 Sum_probs=50.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhhccCeee-ecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~~~~v~~-d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
++|.|+|+|.+|..+++.|.+. | ++|++++|++++.....+.++.. ...+. +.+.++|+||.|.++.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~--G~~~~V~~~d~~~~~~~~a~~~g~~~~~~~~~~~~~~~aDvVilavp~~ 74 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRER--GLAREVVAVDRRAKSLELAVSLGVIDRGEEDLAEAVSGADVIVLAVPVL 74 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhc--CCCCEEEEEECChhHHHHHHHCCCCCcccCCHHHHhcCCCEEEECCCHH
Confidence 7899999999999999999998 8 58999999987765544445431 11222 3467899999999864
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.021 Score=49.15 Aligned_cols=69 Identities=12% Similarity=0.231 Sum_probs=49.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-cc-------CeeeecCCc-----------cccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NM-------GITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-~~-------~v~~d~~d~-----------~~~~~~D 144 (267)
+..+|+|. .-||++++..|.+. |++|.+.+++...+++-. .. -+.+|+.++ +.+..++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~--Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKK--GARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhc--CcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 56788886 57999999999999 999999998765443221 11 133454432 2456799
Q ss_pred EEEEccCCCCC
Q 024494 145 YVIFCAPPSRS 155 (267)
Q Consensus 145 ~Vi~~a~~~~~ 155 (267)
++++|||+.+.
T Consensus 93 vlVncAGItrD 103 (256)
T KOG1200|consen 93 VLVNCAGITRD 103 (256)
T ss_pred EEEEcCccccc
Confidence 99999998763
|
|
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.011 Score=57.32 Aligned_cols=70 Identities=19% Similarity=0.260 Sum_probs=52.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh-hccCeeeecC--CccccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-INMGITPSLK--WTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l-~~~~v~~d~~--d~~~~~~~D~Vi~~a~~~~ 154 (267)
.+++|+|+|+|-.|.++++.|++. |++|++.+++.....++ ...|+..... +.+.+.++|.||...+...
T Consensus 14 ~~~~v~v~G~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~d~vV~Spgi~~ 86 (473)
T PRK00141 14 LSGRVLVAGAGVSGRGIAAMLSEL--GCDVVVADDNETARHKLIEVTGVADISTAEASDQLDSFSLVVTSPGWRP 86 (473)
T ss_pred cCCeEEEEccCHHHHHHHHHHHHC--CCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHhcCCCEEEeCCCCCC
Confidence 357899999999999999999999 99999999875543332 3346655432 2334668999999888654
|
|
| >COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0075 Score=55.38 Aligned_cols=67 Identities=19% Similarity=0.245 Sum_probs=50.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec------------CCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL------------KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~------------~d~~~~~~~D~Vi~~a~~ 152 (267)
|||+|+|+|-+|+.++-.|.+. |+.|+.+.|++. .+.+.+.|....- .+++....+|+||.+.-.
T Consensus 1 mkI~IlGaGAvG~l~g~~L~~~--g~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa 77 (307)
T COG1893 1 MKILILGAGAIGSLLGARLAKA--GHDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKA 77 (307)
T ss_pred CeEEEECCcHHHHHHHHHHHhC--CCeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecc
Confidence 7899999999999999999999 889999999875 5555554543321 122456689999988765
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 78 ~q 79 (307)
T COG1893 78 YQ 79 (307)
T ss_pred cc
Confidence 43
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0085 Score=57.34 Aligned_cols=68 Identities=26% Similarity=0.386 Sum_probs=50.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc-cCeee-ecCCc-cccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITP-SLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~-~~v~~-d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
++|+|+|+|-+|+.+++.|... |. +|++++|++++...+.. .+... ...+. +.+.++|+||.|.+...
T Consensus 183 ~~vlViGaG~iG~~~a~~L~~~--G~~~V~v~~r~~~ra~~la~~~g~~~~~~~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 183 KKVLVIGAGEMGELVAKHLAEK--GVRKITVANRTLERAEELAEEFGGEAIPLDELPEALAEADIVISSTGAPH 254 (423)
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHcCCcEeeHHHHHHHhccCCEEEECCCCCC
Confidence 7899999999999999999988 87 89999999877654432 23221 12222 35678999999987544
|
|
| >TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.014 Score=57.11 Aligned_cols=68 Identities=16% Similarity=0.147 Sum_probs=50.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh-----------hccCee-----------e-ecCCcccc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INMGIT-----------P-SLKWTEAT 140 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l-----------~~~~v~-----------~-d~~d~~~~ 140 (267)
.++|.|+|+|.+|..++..|++. |++|+..+++++..+.. ...|.. . ...+.+.+
T Consensus 5 ~~kV~VIGaG~MG~gIA~~la~a--G~~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~~~~~l 82 (503)
T TIGR02279 5 VVTVAVIGAGAMGAGIAQVAASA--GHQVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIPVTDLHAL 82 (503)
T ss_pred ccEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEEeCCHHHh
Confidence 47899999999999999999999 99999999997765421 112210 0 01233456
Q ss_pred CCCCEEEEccCCC
Q 024494 141 QKFPYVIFCAPPS 153 (267)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (267)
.++|+||-|+...
T Consensus 83 ~~aDlVIEav~E~ 95 (503)
T TIGR02279 83 ADAGLVIEAIVEN 95 (503)
T ss_pred CCCCEEEEcCcCc
Confidence 7999999998654
|
This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families. |
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0048 Score=56.89 Aligned_cols=68 Identities=15% Similarity=0.221 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee----ec---------CCc-cccCCCCEEEEc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----SL---------KWT-EATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~----d~---------~d~-~~~~~~D~Vi~~ 149 (267)
|++|.|+|+|--|.+|+..|.++ ||+|+.+.|+++...++.....+. ++ .|. ++++++|+|+..
T Consensus 1 ~~kI~ViGaGswGTALA~~la~n--g~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~a 78 (329)
T COG0240 1 MMKIAVIGAGSWGTALAKVLARN--GHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIA 78 (329)
T ss_pred CceEEEEcCChHHHHHHHHHHhc--CCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEE
Confidence 58999999999999999999999 999999999877665543321111 11 122 466789999988
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
.+..
T Consensus 79 vPs~ 82 (329)
T COG0240 79 VPSQ 82 (329)
T ss_pred CChH
Confidence 7654
|
|
| >PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.017 Score=55.71 Aligned_cols=68 Identities=15% Similarity=0.213 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-----hhhhccCeeeecCC--ccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELINMGITPSLKW--TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~-----~~l~~~~v~~d~~d--~~~~~~~D~Vi~~a~~~ 153 (267)
+++|+|+|.|..|..+++.|++. |++|++.++++... ..+...|+.....+ ++.+.++|.||...+..
T Consensus 14 ~~~i~v~G~G~sG~a~a~~L~~~--G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~~~~dlVV~Spgi~ 88 (458)
T PRK01710 14 NKKVAVVGIGVSNIPLIKFLVKL--GAKVTAFDKKSEEELGEVSNELKELGVKLVLGENYLDKLDGFDVIFKTPSMR 88 (458)
T ss_pred CCeEEEEcccHHHHHHHHHHHHC--CCEEEEECCCCCccchHHHHHHHhCCCEEEeCCCChHHhccCCEEEECCCCC
Confidence 47899999999999999999999 99999999865321 23444566654432 24457899999987654
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=56.30 Aligned_cols=69 Identities=17% Similarity=0.121 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-----hhhhccCeeeecCC-ccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELINMGITPSLKW-TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~-----~~l~~~~v~~d~~d-~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|.|.+|..+++.|.++ |++|+++++++... ..+.+.|+.....+ .....++|.||.+.|...
T Consensus 16 ~~~v~viG~G~~G~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~~~~~~D~Vv~s~Gi~~ 90 (480)
T PRK01438 16 GLRVVVAGLGVSGFAAADALLEL--GARVTVVDDGDDERHRALAAILEALGATVRLGPGPTLPEDTDLVVTSPGWRP 90 (480)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCccccCCCCEEEECCCcCC
Confidence 36899999999999999999999 99999998764311 22444566655432 223457999999888643
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0049 Score=53.89 Aligned_cols=68 Identities=19% Similarity=0.172 Sum_probs=41.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
++|.|+|||.||..+++.+.+..-+.+ |.+.+|+.++..++...-...+..+. +...+.|+|+-||++
T Consensus 1 l~vgiVGcGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s~ide~~~~~DlvVEaAS~ 70 (255)
T COG1712 1 LKVGIVGCGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVSDIDELIAEVDLVVEAASP 70 (255)
T ss_pred CeEEEEeccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccccHHHHhhccceeeeeCCH
Confidence 579999999999999999875521243 67778888877655432111111221 222455555555544
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0093 Score=55.63 Aligned_cols=70 Identities=14% Similarity=0.137 Sum_probs=40.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhc-CCCCeEEEEeCCCCCchhhhccCeeeec--CCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSL--KWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~-~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~~~~~~~D~Vi~~a~~~ 153 (267)
.+||.|+|+ |++|+.|++.|.++ +|..++..++........+...+.+..+ .+++.+.++|+||.+++..
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~~~~~~~~D~vf~a~p~~ 80 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELTEDSFDGVDIALFSAGGS 80 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCCHHHHcCCCEEEECCCcH
Confidence 378999996 99999999999886 2333555444332211111111222222 2223457789888887643
|
|
| >PRK13301 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0069 Score=54.34 Aligned_cols=69 Identities=19% Similarity=0.194 Sum_probs=43.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhc-CCCCeEEEEeC-CCCCchhhhccCeeeecCCccc--cCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQE-HPGCQIYGQTM-TADHHDELINMGITPSLKWTEA--TQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~-~pG~~V~~l~R-~~~~~~~l~~~~v~~d~~d~~~--~~~~D~Vi~~a~~~~ 154 (267)
.+||.|+|+|.||+.++++|.+. .+++++.++.+ ++++...+.. .+. .+.+.+. ..++|+|+-||++..
T Consensus 2 ~~rvgiIG~GaIG~~va~~l~~~~~~~~~l~~V~~~~~~~~~~~~~-~~~-~~~~l~~ll~~~~DlVVE~A~~~a 74 (267)
T PRK13301 2 THRIAFIGLGAIASDVAAGLLADAAQPCQLAALTRNAADLPPALAG-RVA-LLDGLPGLLAWRPDLVVEAAGQQA 74 (267)
T ss_pred ceEEEEECccHHHHHHHHHHhcCCCCceEEEEEecCCHHHHHHhhc-cCc-ccCCHHHHhhcCCCEEEECCCHHH
Confidence 47899999999999999999765 12367666544 4434433322 111 1233332 467888888887653
|
|
| >TIGR01921 DAP-DH diaminopimelate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.011 Score=54.64 Aligned_cols=67 Identities=21% Similarity=0.316 Sum_probs=44.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEE-eCCC-CCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTA-DHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l-~R~~-~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+.||.|+|+|.+|+.+++.+.+. |+.+++++ +|++ +... ...++....+..+.+.++|+|++|.+..
T Consensus 3 kIRVgIVG~GnIGr~~a~al~~~-pd~ELVgV~dr~~~~~~~--~~~~v~~~~d~~e~l~~iDVViIctPs~ 71 (324)
T TIGR01921 3 KIRAAIVGYGNLGRSVEKAIQQQ-PDMELVGVFSRRGAETLD--TETPVYAVADDEKHLDDVDVLILCMGSA 71 (324)
T ss_pred CcEEEEEeecHHHHHHHHHHHhC-CCcEEEEEEcCCcHHHHh--hcCCccccCCHHHhccCCCEEEEcCCCc
Confidence 36899999999999999988865 68999875 5654 2221 1122222212223457899999997643
|
This model represents the diaminopimelate dehydrogenase enzyme which provides an alternate (shortcut) route of lysine buiosynthesis in Corynebacterium, Bacterioides, Porphyromonas and scattered other species. The enzyme from Corynebacterium glutamicum has been crystallized and characterized. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.008 Score=56.07 Aligned_cols=91 Identities=16% Similarity=0.126 Sum_probs=51.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhh---c-c-Ce---eeecCCcc-ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI---N-M-GI---TPSLKWTE-ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~---~-~-~v---~~d~~d~~-~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+ |++|+.+++.|.+. |++++..+ +++......+. . . +. ..+..+.+ ...++|+||.|.+..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~h-P~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~~~~~~~~~~DvVf~alP~~ 79 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNH-PEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPIDEEEIAEDADVVFLALPHG 79 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC-CCceEEEEeccchhcCCChHHhCccccccCCceeecCCHHHhhcCCCEEEECCCch
Confidence 58999997 99999999999865 78999855 54332111111 1 0 11 11111222 335899999998654
Q ss_pred CCCChHHHHHHHHHHhCCCCcEEEEcCCc
Q 024494 154 RSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (267)
Q Consensus 154 ~~~~~~~~~~~l~~~~~~v~r~V~~SS~~ 182 (267)
...+++ ..+ . ..| +++|=.|+..
T Consensus 80 ~s~~~~---~~~-~-~~G-~~VIDlS~~f 102 (346)
T TIGR01850 80 VSAELA---PEL-L-AAG-VKVIDLSADF 102 (346)
T ss_pred HHHHHH---HHH-H-hCC-CEEEeCChhh
Confidence 211111 111 1 123 6777777654
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.023 Score=52.59 Aligned_cols=69 Identities=10% Similarity=0.108 Sum_probs=44.9
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcC-----CCCeEEEEeCCCCC--chhhhccCe---e------eec-CC-ccccCCCCEE
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEH-----PGCQIYGQTMTADH--HDELINMGI---T------PSL-KW-TEATQKFPYV 146 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~-----pG~~V~~l~R~~~~--~~~l~~~~v---~------~d~-~d-~~~~~~~D~V 146 (267)
||.|+|+ |.+|+.++..|.... ..+++..+|+.+.. ..... .++ . ... .+ .+.+.++|+|
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~-~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiV 79 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVV-MELMDCAFPLLDGVVPTHDPAVAFTDVDVA 79 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeE-eehhcccchhcCceeccCChHHHhCCCCEE
Confidence 5899998 999999999998740 03368999986442 21110 010 0 001 12 3678899999
Q ss_pred EEccCCCCC
Q 024494 147 IFCAPPSRS 155 (267)
Q Consensus 147 i~~a~~~~~ 155 (267)
|++|+..+.
T Consensus 80 VitAG~~~~ 88 (324)
T TIGR01758 80 ILVGAFPRK 88 (324)
T ss_pred EEcCCCCCC
Confidence 999997543
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0071 Score=58.54 Aligned_cols=65 Identities=11% Similarity=0.113 Sum_probs=47.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
-++|+|+|.|.||+.+++.|... |.+|+++++++.+.......|+.... -.+.+..+|+|+.+.+
T Consensus 254 GKtVgVIG~G~IGr~vA~rL~a~--Ga~ViV~e~dp~~a~~A~~~G~~~~~-leell~~ADIVI~atG 318 (476)
T PTZ00075 254 GKTVVVCGYGDVGKGCAQALRGF--GARVVVTEIDPICALQAAMEGYQVVT-LEDVVETADIFVTATG 318 (476)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhHHHHHhcCceecc-HHHHHhcCCEEEECCC
Confidence 48899999999999999999999 99999998887654222223443211 1135678999988765
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.011 Score=56.24 Aligned_cols=66 Identities=15% Similarity=0.191 Sum_probs=47.1
Q ss_pred CCeEEEEc-----------------ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe-eeecCCc--------
Q 024494 84 ENDLLIVG-----------------PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-TPSLKWT-------- 137 (267)
Q Consensus 84 m~~ILV~G-----------------aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v-~~d~~d~-------- 137 (267)
.++||||| +|.+|.+++++|.++ |++|+.++++.. ... ..++ ..++.+.
T Consensus 188 gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~--Ga~V~~v~~~~~-~~~--~~~~~~~dv~~~~~~~~~v~ 262 (399)
T PRK05579 188 GKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARR--GADVTLVSGPVN-LPT--PAGVKRIDVESAQEMLDAVL 262 (399)
T ss_pred CCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHC--CCEEEEeCCCcc-ccC--CCCcEEEccCCHHHHHHHHH
Confidence 37899994 399999999999999 999999998653 111 1122 2334332
Q ss_pred cccCCCCEEEEccCCCC
Q 024494 138 EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 138 ~~~~~~D~Vi~~a~~~~ 154 (267)
+.+.++|++|++|+..+
T Consensus 263 ~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 263 AALPQADIFIMAAAVAD 279 (399)
T ss_pred HhcCCCCEEEEcccccc
Confidence 23567999999999754
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0073 Score=54.80 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=49.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhcc------Ceeee-cCC-ccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM------GITPS-LKW-TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~------~v~~d-~~d-~~~~~~~D~Vi~~a~~~ 153 (267)
.++|+|+|+|-.|++++..|.+. |. +|++++|+.++.+.+... ..... ..+ .+.+.++|+||++.+..
T Consensus 127 ~k~vlIlGaGGaaraia~aL~~~--G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~~~~~~~~aDiVInaTp~G 203 (284)
T PRK12549 127 LERVVQLGAGGAGAAVAHALLTL--GVERLTIFDVDPARAAALADELNARFPAARATAGSDLAAALAAADGLVHATPTG 203 (284)
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccchHhhhCCCCEEEECCcCC
Confidence 37899999999999999999999 87 799999998877655321 11111 122 12467899999996543
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.01 Score=53.33 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=43.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cCeeeecCCccc-cCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWTEA-TQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~v~~d~~d~~~-~~~~D~Vi~~a~~~ 153 (267)
|+||.|+|+|.||+.+++.|.+. |+.++.++...+........ .++. ...|.+. ..++|+|+.|+++.
T Consensus 1 m~rVgIiG~G~iG~~~~~~l~~~-~~~~l~~v~~~~~~~~~~~~~~~~~~~-~~~d~~~l~~~~DvVve~t~~~ 72 (265)
T PRK13303 1 MMKVAMIGFGAIGAAVLELLEHD-PDLRVDWVIVPEHSIDAVRRALGEAVR-VVSSVDALPQRPDLVVECAGHA 72 (265)
T ss_pred CcEEEEECCCHHHHHHHHHHhhC-CCceEEEEEEcCCCHHHHhhhhccCCe-eeCCHHHhccCCCEEEECCCHH
Confidence 57999999999999999999876 47787766533222211111 1211 1222222 35699999998864
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.084 Score=46.39 Aligned_cols=136 Identities=13% Similarity=0.052 Sum_probs=78.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCc-hhhhcc-----Ce---eeecCCc-----------cc--c
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHH-DELINM-----GI---TPSLKWT-----------EA--T 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~-~~l~~~-----~v---~~d~~d~-----------~~--~ 140 (267)
+.|+|+|+ --||..|+++|++. +|.+++..+ |+++++ .++..+ .+ ..|+++. +. .
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~-~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKD-KGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcC-CCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 56999998 77999999999977 488876555 557763 333221 12 2233221 12 4
Q ss_pred CCCCEEEEccCCCCC----CC-----hHHH-----------HHH---HHH-HhC---------CCCcEEEEcCCccccCC
Q 024494 141 QKFPYVIFCAPPSRS----LD-----YPGD-----------VRL---AAL-SWN---------GEGSFLFTSSSAIYDCS 187 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~----~~-----~~~~-----------~~~---l~~-~~~---------~v~r~V~~SS~~VYg~~ 187 (267)
.+.|++++.||.... .+ +.+. .+. ++. +.. +...+|++||..-- .
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s--~ 160 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS--I 160 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc--c
Confidence 678999999985431 10 1111 111 111 111 12468889886532 1
Q ss_pred CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccc
Q 024494 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (267)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iy 231 (267)
. .. .+.+...|.++|.+.-...++. + ++-+-||++-
T Consensus 161 ~------~~--~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~ 205 (249)
T KOG1611|consen 161 G------GF--RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQ 205 (249)
T ss_pred C------CC--CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEE
Confidence 1 11 1222468999998876665543 2 5668888875
|
|
| >PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.0061 Score=56.65 Aligned_cols=68 Identities=19% Similarity=0.239 Sum_probs=47.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---------ee----ee-cCCc-cccCCCCEEE
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---------IT----PS-LKWT-EATQKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---------v~----~d-~~d~-~~~~~~D~Vi 147 (267)
.||||.|+|+|.+|..++..|.+. | +|+.+.|+++..+.+.+.+ .. .. ..|. +.+.++|+||
T Consensus 6 ~~mkI~IiGaGa~G~alA~~La~~--g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVi 82 (341)
T PRK12439 6 REPKVVVLGGGSWGTTVASICARR--G-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVV 82 (341)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--C-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEE
Confidence 458999999999999999999998 8 6778888766554443221 10 00 1222 3567899999
Q ss_pred EccCCC
Q 024494 148 FCAPPS 153 (267)
Q Consensus 148 ~~a~~~ 153 (267)
.+.++.
T Consensus 83 lavps~ 88 (341)
T PRK12439 83 MGVPSH 88 (341)
T ss_pred EEeCHH
Confidence 998754
|
|
| >COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.009 Score=55.28 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=46.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
-++|.|+|.|-||+.+++.|..- |.+|++.++-........ .++.. ..+. +.+..+|+|+..++...
T Consensus 142 gkTvGIiG~G~IG~~va~~l~af--gm~v~~~d~~~~~~~~~~-~~~~~-~~~Ld~lL~~sDiv~lh~PlT~ 209 (324)
T COG0111 142 GKTVGIIGLGRIGRAVAKRLKAF--GMKVIGYDPYSPRERAGV-DGVVG-VDSLDELLAEADILTLHLPLTP 209 (324)
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCCchhhhcc-cccee-cccHHHHHhhCCEEEEcCCCCc
Confidence 48999999999999999999999 999999999332211111 11211 1111 35778898888877654
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.033 Score=50.90 Aligned_cols=66 Identities=17% Similarity=0.099 Sum_probs=47.9
Q ss_pred EEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhhc----c-----Ceeeec-CCccccCCCCEEEEccCCCC
Q 024494 87 LLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN----M-----GITPSL-KWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 87 ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~~----~-----~v~~d~-~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|.|+|+|.+|..++-.|+.+ | .+++.+++++++...... . ...... .|.+.+.++|+||.+++...
T Consensus 1 i~iiGaG~VG~~~a~~l~~~--~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGAGNVGAAVAFALIAK--GLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDYADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCHHHhCCCCEEEEcCCCCC
Confidence 57899999999999999988 7 689999998775543221 0 011111 33467899999999999643
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0065 Score=59.10 Aligned_cols=69 Identities=22% Similarity=0.316 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-Cee-eecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GIT-PSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~-~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++++|+|+|-+|++++..|.+. |++|+..+|+.++...+... +.. ....+...+.++|+||+|.+...
T Consensus 332 ~k~vlIiGaGgiG~aia~~L~~~--G~~V~i~~R~~~~~~~la~~~~~~~~~~~~~~~l~~~DiVInatP~g~ 402 (477)
T PRK09310 332 NQHVAIVGAGGAAKAIATTLARA--GAELLIFNRTKAHAEALASRCQGKAFPLESLPELHRIDIIINCLPPSV 402 (477)
T ss_pred CCEEEEEcCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccceechhHhcccCCCCEEEEcCCCCC
Confidence 37899999999999999999999 99999999987665544321 111 11222233578999999997653
|
|
| >PTZ00431 pyrroline carboxylate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0077 Score=53.78 Aligned_cols=62 Identities=15% Similarity=0.168 Sum_probs=44.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|||.|+|+|.+|..+++.|.+. + .+|++.+|+.++. ++.....+.+...++|+||.|..|..
T Consensus 4 mkI~iIG~G~mG~ai~~~l~~~--~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~~D~Vilavkp~~ 69 (260)
T PTZ00431 4 IRVGFIGLGKMGSALAYGIENS--NIIGKENIYYHTPSKKNT------PFVYLQSNEELAKTCDIIVLAVKPDL 69 (260)
T ss_pred CEEEEECccHHHHHHHHHHHhC--CCCCcceEEEECCChhcC------CeEEeCChHHHHHhCCEEEEEeCHHH
Confidence 7899999999999999999987 5 3588888875442 22221122234568999999977654
|
|
| >COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.015 Score=51.47 Aligned_cols=44 Identities=18% Similarity=0.341 Sum_probs=39.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI 130 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v 130 (267)
|+|.++|.|.+|..++++|++. ||+|++.++++...+++...+.
T Consensus 1 M~iGmiGLGrMG~n~v~rl~~~--ghdvV~yD~n~~av~~~~~~ga 44 (300)
T COG1023 1 MQIGMIGLGRMGANLVRRLLDG--GHDVVGYDVNQTAVEELKDEGA 44 (300)
T ss_pred CcceeeccchhhHHHHHHHHhC--CCeEEEEcCCHHHHHHHHhcCC
Confidence 6788999999999999999999 9999999999888777765553
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0078 Score=58.20 Aligned_cols=65 Identities=11% Similarity=0.092 Sum_probs=47.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
-++|+|+|+|.||+.+++.++.. |.+|+++++++.+.......+...... .+.+.++|+||.+.+
T Consensus 254 GKtVvViGyG~IGr~vA~~aka~--Ga~VIV~e~dp~r~~eA~~~G~~vv~l-eEal~~ADVVI~tTG 318 (477)
T PLN02494 254 GKVAVICGYGDVGKGCAAAMKAA--GARVIVTEIDPICALQALMEGYQVLTL-EDVVSEADIFVTTTG 318 (477)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCchhhHHHHhcCCeeccH-HHHHhhCCEEEECCC
Confidence 37899999999999999999998 999999999876543323334432211 135667888887655
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.011 Score=55.73 Aligned_cols=58 Identities=24% Similarity=0.288 Sum_probs=44.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC-ccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d-~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|. |.||+.+++.|.+.. +++|+++++..+.. .+ .+.+.++|+||.|+++..
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~d~~~------------~~~~~~v~~aDlVilavPv~~ 63 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPADPGS------------LDPATLLQRADVLIFSAPIRH 63 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCCcccc------------CCHHHHhcCCCEEEEeCCHHH
Confidence 378999998 999999999999753 89999999852211 11 135678999999988654
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.012 Score=54.29 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=29.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
||.+|.|+|+ |++|+.|++.|.++ |..++..+..+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~h-p~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGR-SDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcC-CCeEEEEEecCC
Confidence 5689999996 99999999988776 667888877654
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.038 Score=50.31 Aligned_cols=66 Identities=15% Similarity=0.107 Sum_probs=46.7
Q ss_pred EEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhh----hcc----C--eeeec-CCccccCCCCEEEEccCCCC
Q 024494 87 LLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----INM----G--ITPSL-KWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 87 ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l----~~~----~--v~~d~-~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|.|+|+|.+|..++..|..+ |. +|+.++++++..... ... + ..... .|.+.+.++|+||.+++...
T Consensus 1 I~IIGaG~vG~~ia~~la~~--~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~~l~dADiVIit~g~p~ 78 (300)
T cd01339 1 ISIIGAGNVGATLAQLLALK--ELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYEDIAGSDVVVITAGIPR 78 (300)
T ss_pred CEEECCCHHHHHHHHHHHhC--CCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHHHhCCCCEEEEecCCCC
Confidence 56899999999999999888 76 999999987653211 110 1 11111 33456899999999998543
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.032 Score=43.62 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=51.3
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhhccC--ee-e--ecCCcc--ccCCCCEEEEccCCCCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELINMG--IT-P--SLKWTE--ATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~~~~--v~-~--d~~d~~--~~~~~D~Vi~~a~~~~~~ 156 (267)
||.|+|+ |.+|..+++.|.+. |+++|.++ +++.+........+ +. . ...+.+ ...++|+||.|.+.....
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~-~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvV~~~~~~~~~~ 79 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEH-PDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFEELAVDIVFLALPHGVSK 79 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcC-CCceEEEEEechhhcCcCHHHHCcccccccccccccCChhhcCCCEEEEcCCcHHHH
Confidence 5889996 99999999999885 48899888 44332222221111 11 1 111111 125899999998775321
Q ss_pred ChHHHHHHHHHHhCCCCcEEEEcCCc
Q 024494 157 DYPGDVRLAALSWNGEGSFLFTSSSA 182 (267)
Q Consensus 157 ~~~~~~~~l~~~~~~v~r~V~~SS~~ 182 (267)
+.+..+.......+.+|-+||+-
T Consensus 80 ---~~~~~~~~~~~~g~~viD~s~~~ 102 (122)
T smart00859 80 ---EIAPLLPKAAEAGVKVIDLSSAF 102 (122)
T ss_pred ---HHHHHHHhhhcCCCEEEECCccc
Confidence 11212211122335666677653
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.054 Score=50.67 Aligned_cols=68 Identities=13% Similarity=0.078 Sum_probs=49.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhh----cc----C-eeeec-CCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELI----NM----G-ITPSL-KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~----~~----~-v~~d~-~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|+|+|.+|+.++-.|..+ +. ++..++.++++..... .. + ..... .|.+.++++|+||.+|+.
T Consensus 38 ~KI~IIGaG~VG~~~a~~l~~~--~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGVGNVGMAIAQTILTQ--DLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYAVTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHHHhCCCCEEEECCCC
Confidence 6999999999999999999887 64 7999999776543221 10 1 11111 244568999999999997
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 116 ~~ 117 (350)
T PLN02602 116 RQ 117 (350)
T ss_pred CC
Confidence 54
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.06 Score=49.56 Aligned_cols=71 Identities=14% Similarity=0.178 Sum_probs=49.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hc----cCeeeec---CCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----IN----MGITPSL---KWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~----~~v~~d~---~d~~~~~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.||+.++-.|..+..+.++..++...+..... .. .+....+ .+-+.+.++|+|+.+||..
T Consensus 1 ~KVaviGaG~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~y~~~~~aDiVvitAG~p 80 (313)
T COG0039 1 MKVAVIGAGNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGDYEDLKGADIVVITAGVP 80 (313)
T ss_pred CeEEEECCChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCChhhhcCCCEEEEeCCCC
Confidence 58999999999999999998773345899999985443221 11 0111111 2245789999999999866
Q ss_pred CC
Q 024494 154 RS 155 (267)
Q Consensus 154 ~~ 155 (267)
+.
T Consensus 81 rK 82 (313)
T COG0039 81 RK 82 (313)
T ss_pred CC
Confidence 53
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0074 Score=60.35 Aligned_cols=67 Identities=13% Similarity=0.178 Sum_probs=53.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCcc-----ccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~~-----~~~~~D~Vi~~a~~ 152 (267)
.++|+|+|.|-+|+.+++.|.++ |++|++++.++++.+.+.+.|... |..+++ ...++|.|+.+.+.
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMAN--KMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCC
Confidence 37899999999999999999999 999999999998887776666554 344432 35689998877643
|
|
| >PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.012 Score=57.86 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=49.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|..- |++|++++|..... .....++... +. +.+.++|+|+.+++...
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~-~~~~~g~~~~--~l~ell~~aDiV~l~lP~t~ 206 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAF--GMKVIAYDPYISPE-RAAQLGVELV--SLDELLARADFITLHTPLTP 206 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCChh-HHHhcCCEEE--cHHHHHhhCCEEEEccCCCh
Confidence 348899999999999999999998 99999999864321 1122344432 22 46788999998888653
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.014 Score=51.18 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=51.3
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---c-------CeeeecCCc-----------cccCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---M-------GITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~-------~v~~d~~d~-----------~~~~~ 142 (267)
++++++| +|-||+.+.++|+++ |..+.+++-+.++.+...+ . .+..|+.+. +.+..
T Consensus 6 Kna~vtggagGIGl~~sk~Ll~k--gik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 6 KNALVTGGAGGIGLATSKALLEK--GIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred ceEEEecCCchhhHHHHHHHHHc--CchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 6788887 699999999999999 9998888877666443322 1 123344432 25678
Q ss_pred CCEEEEccCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD 157 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~ 157 (267)
.|++|+-|+.....+
T Consensus 84 iDIlINgAGi~~dkd 98 (261)
T KOG4169|consen 84 IDILINGAGILDDKD 98 (261)
T ss_pred eEEEEcccccccchh
Confidence 999999999876443
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0074 Score=57.45 Aligned_cols=69 Identities=25% Similarity=0.376 Sum_probs=55.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCeeeec-CC-ccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSL-KW-TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v~~d~-~d-~~~~~~~D~Vi~~a~~~~ 154 (267)
.+++||+|+|-+|..++++|.++ | .+|++..|+.+++.++.. .+..... .+ .+.+..+|+||.+.+...
T Consensus 178 ~~~vlvIGAGem~~lva~~L~~~--g~~~i~IaNRT~erA~~La~~~~~~~~~l~el~~~l~~~DvVissTsa~~ 250 (414)
T COG0373 178 DKKVLVIGAGEMGELVAKHLAEK--GVKKITIANRTLERAEELAKKLGAEAVALEELLEALAEADVVISSTSAPH 250 (414)
T ss_pred cCeEEEEcccHHHHHHHHHHHhC--CCCEEEEEcCCHHHHHHHHHHhCCeeecHHHHHHhhhhCCEEEEecCCCc
Confidence 37899999999999999999999 8 589999999988877653 4544432 33 257889999999877654
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0072 Score=57.75 Aligned_cols=68 Identities=22% Similarity=0.316 Sum_probs=50.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCeee-ecCCc-cccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITP-SLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v~~-d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
++|+|+|+|-+|+.+++.|... | .+|++++|+.++...+.. .+... ...+. +.+.++|+||.|.+...
T Consensus 181 ~~VlViGaG~iG~~~a~~L~~~--G~~~V~v~~rs~~ra~~la~~~g~~~i~~~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 181 KKALLIGAGEMGELVAKHLLRK--GVGKILIANRTYERAEDLAKELGGEAVKFEDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred CEEEEECChHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHcCCeEeeHHHHHHHHhhCCEEEECCCCCC
Confidence 7899999999999999999998 8 789999999876554432 22221 11222 45678999999976544
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.014 Score=48.87 Aligned_cols=55 Identities=15% Similarity=0.182 Sum_probs=43.6
Q ss_pred CCeEEEEcccH-HhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~-IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|- +|..+++.|.++ |.+|+.+.|+.+... +.+.++|+||.+.+...
T Consensus 44 gk~vlViG~G~~~G~~~a~~L~~~--g~~V~v~~r~~~~l~--------------~~l~~aDiVIsat~~~~ 99 (168)
T cd01080 44 GKKVVVVGRSNIVGKPLAALLLNR--NATVTVCHSKTKNLK--------------EHTKQADIVIVAVGKPG 99 (168)
T ss_pred CCEEEEECCcHHHHHHHHHHHhhC--CCEEEEEECCchhHH--------------HHHhhCCEEEEcCCCCc
Confidence 48999999985 699999999999 999999998743221 24678999998887643
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.017 Score=56.31 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=51.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecC--CccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~--d~~~~~~~D~Vi~~a~~~~ 154 (267)
++|+|+|.|-.|...++.|.+. |++|++.++++.....+.+.++..... ..+.+.++|+||.+.|...
T Consensus 13 ~~v~V~G~G~sG~aa~~~L~~~--G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~l~~~D~VV~SpGi~~ 82 (488)
T PRK03369 13 APVLVAGAGVTGRAVLAALTRF--GARPTVCDDDPDALRPHAERGVATVSTSDAVQQIADYALVVTSPGFRP 82 (488)
T ss_pred CeEEEEcCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHhCCCEEEcCcchHhHhhcCCEEEECCCCCC
Confidence 7899999999999999999999 999999997755444444456654332 1234668999999988654
|
|
| >TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.014 Score=57.37 Aligned_cols=68 Identities=15% Similarity=0.230 Sum_probs=49.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|..- |++|+++++..... .....++.. ..+. +.+.++|+|+.+.+...
T Consensus 137 ~gktvgIiG~G~IG~~vA~~l~~f--G~~V~~~d~~~~~~-~~~~~g~~~-~~~l~ell~~aDvV~l~lPlt~ 205 (525)
T TIGR01327 137 YGKTLGVIGLGRIGSIVAKRAKAF--GMKVLAYDPYISPE-RAEQLGVEL-VDDLDELLARADFITVHTPLTP 205 (525)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEECCCCChh-HHHhcCCEE-cCCHHHHHhhCCEEEEccCCCh
Confidence 348899999999999999999998 99999999853221 112234332 1122 46788999998887653
|
This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli. |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.06 Score=61.87 Aligned_cols=33 Identities=9% Similarity=0.010 Sum_probs=28.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
+.+||||. +-||..++++|.++. |++|+.+.|+
T Consensus 1998 ~vvLVTGGarGIG~aiA~~LA~~~-ga~viL~gRs 2031 (2582)
T TIGR02813 1998 DVFLVTGGAKGVTFECALELAKQC-QAHFILAGRS 2031 (2582)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhc-CCEEEEEeCC
Confidence 67899985 899999999999883 5899999998
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.013 Score=42.41 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=31.8
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
+|+|+|+|++|-.++..|.+. |.+|+.+.|.+.-.
T Consensus 1 ~vvViGgG~ig~E~A~~l~~~--g~~vtli~~~~~~~ 35 (80)
T PF00070_consen 1 RVVVIGGGFIGIELAEALAEL--GKEVTLIERSDRLL 35 (80)
T ss_dssp EEEEESSSHHHHHHHHHHHHT--TSEEEEEESSSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHh--CcEEEEEeccchhh
Confidence 689999999999999999999 99999999986543
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK01390 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.012 Score=56.59 Aligned_cols=68 Identities=15% Similarity=0.149 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+++|+|+|.|-.|..+++.|.+. |++|++.|+.+.....+...|+.....+.+.+.++|.||...+..
T Consensus 9 ~~~i~viG~G~~G~~~a~~l~~~--G~~v~~~D~~~~~~~~l~~~g~~~~~~~~~~~~~~d~vv~sp~i~ 76 (460)
T PRK01390 9 GKTVAVFGLGGSGLATARALVAG--GAEVIAWDDNPASRAKAAAAGITTADLRTADWSGFAALVLSPGVP 76 (460)
T ss_pred CCEEEEEeecHhHHHHHHHHHHC--CCEEEEECCChhhHHHHHhcCccccCCChhHHcCCCEEEECCCCC
Confidence 36899999999999999999999 999999997654333444445554322233456799999988754
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0085 Score=60.15 Aligned_cols=65 Identities=18% Similarity=0.284 Sum_probs=52.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCcc-----ccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWTE-----ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~~-----~~~~~D~Vi~~a~ 151 (267)
++|+|+|+|-+|+.+++.|.++ |+++++++.++++.+.+++.|... |..+++ -.+++|.||.+..
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~--g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 401 PRVIIAGFGRFGQIVGRLLLSS--GVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred CcEEEEecChHHHHHHHHHHhC--CCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 7899999999999999999999 999999999999887776666554 444442 3568899888763
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.022 Score=49.07 Aligned_cols=66 Identities=18% Similarity=0.075 Sum_probs=45.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhcc-CeeeecCC--ccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINM-GITPSLKW--TEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~-~v~~d~~d--~~~~~~~D~Vi~~a~ 151 (267)
.++|||+|.|-+|...++.|++. |++|+++++.... ...+... .+.+.... ...+.++|.||-+.+
T Consensus 10 ~k~vLVIGgG~va~~ka~~Ll~~--ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~~~l~~adlViaaT~ 79 (202)
T PRK06718 10 NKRVVIVGGGKVAGRRAITLLKY--GAHIVVISPELTENLVKLVEEGKIRWKQKEFEPSDIVDAFLVIAATN 79 (202)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEcCCCCHHHHHHHhCCCEEEEecCCChhhcCCceEEEEcCC
Confidence 37899999999999999999999 9999999875422 1222222 23443222 245778998876643
|
|
| >TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.02 Score=52.80 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=43.9
Q ss_pred cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-----hhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 93 G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-----~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
=|=|++++++|++. ||+|++.+|++++. ..+...|+...-...++..++|+||.|.+..
T Consensus 29 p~gGspMArnLlkA--GheV~V~Drnrsa~e~e~~e~LaeaGA~~AaS~aEAAa~ADVVIL~LPd~ 92 (341)
T TIGR01724 29 PYGGSRMAIEFAMA--GHDVVLAEPNREFMSDDLWKKVEDAGVKVVSDDKEAAKHGEIHVLFTPFG 92 (341)
T ss_pred CCCHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhHHHHHCCCeecCCHHHHHhCCCEEEEecCCH
Confidence 46799999999999 99999999876543 2355556554333336778999999998743
|
This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.0091 Score=57.09 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=52.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhcc-C-eeee-cCC-ccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM-G-ITPS-LKW-TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~-~-v~~d-~~d-~~~~~~~D~Vi~~a~~~~ 154 (267)
++|+|+|+|-+|+.+++.|.+. |. +|++..|+.++...+... + .... ..+ .+.+.++|+||+|.+...
T Consensus 182 kkvlviGaG~~a~~va~~L~~~--g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~~l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 182 KNVLIIGAGQTGELLFRHVTAL--APKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred CEEEEEcCcHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHhcCCeEecHHHHHHHhccCCEEEECcCCCC
Confidence 7899999999999999999998 85 799999998877666432 2 2221 222 246788999999988654
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.015 Score=54.22 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=48.4
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh---------ccCee-eecCCc-cccCCCCEEEEcc
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---------NMGIT-PSLKWT-EATQKFPYVIFCA 150 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~---------~~~v~-~d~~d~-~~~~~~D~Vi~~a 150 (267)
..-++|.|+|.|-||+.+++.|..- |.+|++++|+........ ..... ....+. +.+.++|+|+.++
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~af--G~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPF--GVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhC--CCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 3448999999999999999999999 999999998743211100 00000 011122 4678899999988
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+...
T Consensus 235 Plt~ 238 (347)
T PLN02928 235 TLTK 238 (347)
T ss_pred CCCh
Confidence 7553
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.07 Score=49.35 Aligned_cols=140 Identities=9% Similarity=0.055 Sum_probs=80.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCCCCC--chh----hhcc------CeeeecCCccccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HDE----LINM------GITPSLKWTEATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~~~~--~~~----l~~~------~v~~d~~d~~~~~~~D 144 (267)
+||.|+|+ |.+|..++-.|... |. ++..+|..+.. ... +... .+.....+.+.+.++|
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD 80 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASG--EMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDAD 80 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhc--cccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCC
Confidence 68999998 99999999999877 64 78999985432 211 1110 1122223346789999
Q ss_pred EEEEccCCCCCC--Ch-------HHHHHHHHH---HhCC-CCcEEEEcCCc---cccCCCCCccCCCCC-CCCCCCCHHH
Q 024494 145 YVIFCAPPSRSL--DY-------PGDVRLAAL---SWNG-EGSFLFTSSSA---IYDCSDNGACDEDSP-VVPIGRSPRT 207 (267)
Q Consensus 145 ~Vi~~a~~~~~~--~~-------~~~~~~l~~---~~~~-v~r~V~~SS~~---VYg~~~~~~~~E~~p-~~p~~~~~y~ 207 (267)
+||.+|+..+.. +. ..-++.+.. ..+. -..+|.+|.-- +| .+-+.++ ..+ ...||
T Consensus 81 ivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~------~~~k~sg~~p~--~~ViG 152 (322)
T cd01338 81 WALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNAL------IAMKNAPDIPP--DNFTA 152 (322)
T ss_pred EEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHH------HHHHHcCCCCh--HheEE
Confidence 999999975432 11 111222221 2232 34566666311 01 0111222 222 13566
Q ss_pred HHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
.+++..+++.... + ...+|...+||+.
T Consensus 153 ~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 153 MTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred ehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 6788887765443 3 5667888889985
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.02 Score=53.95 Aligned_cols=67 Identities=19% Similarity=0.189 Sum_probs=49.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeee--ecCCc----cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP--SLKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~--d~~d~----~~~~~~D~Vi~~a~~ 152 (267)
..+|+|+|+|-+|+.+++.|... |.+|++++|++++.+.+.. .+... ...+. +.+.++|+||.+++.
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~l--Ga~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGL--GATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 36799999999999999999999 9999999998776544432 12211 22222 356789999999854
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK12409 D-amino acid dehydrogenase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0091 Score=56.27 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|.+|+|+|+|++|..+|.+|.+. |++|++++|.+
T Consensus 1 ~~~vvIIGaG~~G~~~A~~La~~--g~~V~vle~~~ 34 (410)
T PRK12409 1 MSHIAVIGAGITGVTTAYALAQR--GYQVTVFDRHR 34 (410)
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 57999999999999999999999 99999999975
|
|
| >PRK00683 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.021 Score=54.43 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=46.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-ccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-~~~~~D~Vi~~a~~~~ 154 (267)
++|+|+|.|.+|..+++.|.+. |++|++.++++.........+-.. ..+.+ ...++|.||.+.+...
T Consensus 4 ~~i~iiGlG~~G~slA~~l~~~--G~~V~g~D~~~~~~~~~~~~~~~~-~~~~~~~~~~~dlvV~s~gi~~ 71 (418)
T PRK00683 4 QRVVVLGLGVTGKSIARFLAQK--GVYVIGVDKSLEALQSCPYIHERY-LENAEEFPEQVDLVVRSPGIKK 71 (418)
T ss_pred CeEEEEEECHHHHHHHHHHHHC--CCEEEEEeCCccccchhHHHhhhh-cCCcHHHhcCCCEEEECCCCCC
Confidence 6899999999999999999999 999999998765432111000000 11222 2367899998887653
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.019 Score=53.42 Aligned_cols=68 Identities=15% Similarity=0.206 Sum_probs=42.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhc-CCCCeEEEEeCCCCCchhhhccCeeeecCCc--cccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSLKWT--EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~-~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~--~~~~~~D~Vi~~a~~ 152 (267)
++|.|+|+ |++|+.|.+.|.++ +|..++..++........+.-.+....+.+. ....++|+||.+++.
T Consensus 5 ~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~~~~~~~~~~~Dvvf~a~p~ 76 (336)
T PRK08040 5 WNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQDAAEFDWSQAQLAFFVAGR 76 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEEeCchhhccCCCEEEECCCH
Confidence 78999997 99999999999874 5677887776543222222111111112222 223578888888764
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.028 Score=46.52 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=43.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-CeeeecCC--ccccCCCCEEEEcc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKW--TEATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~d~~d--~~~~~~~D~Vi~~a 150 (267)
++|+|+|.|-+|...++.|++. |++|++++ ++..+++... .+.++... ++.+.++|.||-+.
T Consensus 14 ~~vlVvGGG~va~rka~~Ll~~--ga~V~VIs--p~~~~~l~~l~~i~~~~~~~~~~dl~~a~lViaaT 78 (157)
T PRK06719 14 KVVVIIGGGKIAYRKASGLKDT--GAFVTVVS--PEICKEMKELPYITWKQKTFSNDDIKDAHLIYAAT 78 (157)
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEc--CccCHHHHhccCcEEEecccChhcCCCceEEEECC
Confidence 7899999999999999999999 99999985 3333333332 23333222 24567888877654
|
|
| >PRK00421 murC UDP-N-acetylmuramate--L-alanine ligase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.025 Score=54.48 Aligned_cols=69 Identities=17% Similarity=0.289 Sum_probs=51.9
Q ss_pred CCeEEEEcccHHhHH-HHHHHHhcCCCCeEEEEeCCCCC-chhhhccCeeeecCC-ccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKW-TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~-La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~v~~d~~d-~~~~~~~D~Vi~~a~~~~ 154 (267)
+++|+|+|.|-.|.. +++.|.++ |++|++.|..+.. ...+.+.++...... ++.+.++|.||...+...
T Consensus 7 ~~~v~viG~G~sG~s~~a~~L~~~--G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~~~d~vv~spgi~~ 78 (461)
T PRK00421 7 IKRIHFVGIGGIGMSGLAEVLLNL--GYKVSGSDLKESAVTQRLLELGAIIFIGHDAENIKDADVVVYSSAIPD 78 (461)
T ss_pred CCEEEEEEEchhhHHHHHHHHHhC--CCeEEEECCCCChHHHHHHHCCCEEeCCCCHHHCCCCCEEEECCCCCC
Confidence 478999999999999 79999999 9999999976542 233544566665422 344568999999888654
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.011 Score=58.00 Aligned_cols=69 Identities=14% Similarity=0.304 Sum_probs=51.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhcc--Ceee---ecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINM--GITP---SLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~--~v~~---d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|-+|+.+++.|... |. +|+++.|+.++...+... +... ...+. +.+.++|+||.|.+...
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~--G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~aDVVIsAT~s~~ 341 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSK--GCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAEADVVFTSTSSET 341 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhcCCEEEEccCCCC
Confidence 47899999999999999999998 86 799999998877665431 2222 12232 46789999998876544
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.14 Score=47.00 Aligned_cols=68 Identities=16% Similarity=0.197 Sum_probs=48.9
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c----Cee------eecCCc-----------cccC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M----GIT------PSLKWT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~----~v~------~d~~d~-----------~~~~ 141 (267)
.+|+|+| +--||..++.++..+ |+.|+.+.|+.++..++.. + .+. .|+.|- +...
T Consensus 34 ~hi~itggS~glgl~la~e~~~~--ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~ 111 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKRE--GADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEG 111 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHc--cCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccC
Confidence 5799997 688999999999999 9999999999877654431 1 122 223221 1234
Q ss_pred CCCEEEEccCCCC
Q 024494 142 KFPYVIFCAPPSR 154 (267)
Q Consensus 142 ~~D~Vi~~a~~~~ 154 (267)
-+|.+|+|||..-
T Consensus 112 ~~d~l~~cAG~~v 124 (331)
T KOG1210|consen 112 PIDNLFCCAGVAV 124 (331)
T ss_pred CcceEEEecCccc
Confidence 6899999999543
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.018 Score=52.33 Aligned_cols=34 Identities=18% Similarity=0.267 Sum_probs=31.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCe-EEEEeCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTA 119 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~-V~~l~R~~ 119 (267)
.++++|+|+|-+|++++..|.+. |++ |++++|+.
T Consensus 126 ~k~vlI~GAGGagrAia~~La~~--G~~~V~I~~R~~ 160 (289)
T PRK12548 126 GKKLTVIGAGGAATAIQVQCALD--GAKEITIFNIKD 160 (289)
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCc
Confidence 36799999999999999999999 985 99999986
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.012 Score=54.60 Aligned_cols=36 Identities=17% Similarity=0.116 Sum_probs=30.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+|+||.|+|+ ||.|..|.+.|..+ |..||...+.+.
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~H-p~ve~~~~ss~~ 37 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGH-PDVELILISSRE 37 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcC-CCeEEEEeechh
Confidence 5789999996 99999999999876 788977766543
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.0096 Score=47.20 Aligned_cols=64 Identities=27% Similarity=0.346 Sum_probs=39.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCch-----hhhc---cCeeeecCCc-cccCCCCEEEEcc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHD-----ELIN---MGITPSLKWT-EATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~-----~l~~---~~v~~d~~d~-~~~~~~D~Vi~~a 150 (267)
|||+|.|+ |.+|+.+++.+.++ |++++.+. +|+++... ++.. .++.. ..|. +.+..+|+||...
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~-~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v-~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILES-PGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPV-TDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHS-TTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBE-BS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CCcEEEEEEecCCcccccchhhhhhCcCCccccc-chhHHHhcccCCEEEEcC
Confidence 58999998 99999999999995 38886654 56552111 1110 11111 1222 3556699999876
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK08410 2-hydroxyacid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.031 Score=51.39 Aligned_cols=65 Identities=17% Similarity=0.185 Sum_probs=47.5
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..-++|.|+|.|-||+.+++.+..- |.+|.+.+|..... ..++.. .+. +.+..+|+|+.+++...
T Consensus 143 L~gktvGIiG~G~IG~~vA~~~~~f--gm~V~~~d~~~~~~----~~~~~~--~~l~ell~~sDvv~lh~Plt~ 208 (311)
T PRK08410 143 IKGKKWGIIGLGTIGKRVAKIAQAF--GAKVVYYSTSGKNK----NEEYER--VSLEELLKTSDIISIHAPLNE 208 (311)
T ss_pred cCCCEEEEECCCHHHHHHHHHHhhc--CCEEEEECCCcccc----ccCcee--ecHHHHhhcCCEEEEeCCCCc
Confidence 3448999999999999999999888 99999999864321 112221 122 46788999988887554
|
|
| >PRK06141 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.016 Score=53.26 Aligned_cols=69 Identities=19% Similarity=0.189 Sum_probs=49.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----Ceeee-cCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPS-LKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~d-~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
++|+|+|+|..|+..++.+....+..+|++.+|++++...+... ++... ..+. +.+.++|+|+.|.+..
T Consensus 126 ~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~~~~~av~~aDIVi~aT~s~ 200 (314)
T PRK06141 126 SRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVTDLEAAVRQADIISCATLST 200 (314)
T ss_pred ceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeCCHHHHHhcCCEEEEeeCCC
Confidence 78999999999999999777633367999999998877665432 32222 2333 4678999997666543
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.038 Score=52.81 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=48.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc----hhhhccCeeeecC-Cc-cccC-CCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELINMGITPSLK-WT-EATQ-KFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~----~~l~~~~v~~d~~-d~-~~~~-~~D~Vi~~a~~~~ 154 (267)
++|+|+|.|-+|.+.++.|++. |++|++.+++.... ..+...++..... ++ +.+. ++|.||...+...
T Consensus 6 k~v~v~G~g~~G~s~a~~l~~~--G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~~ 80 (447)
T PRK02472 6 KKVLVLGLAKSGYAAAKLLHKL--GANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLELLDEDFDLMVKNPGIPY 80 (447)
T ss_pred CEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHHHhcCcCCEEEECCCCCC
Confidence 6899999877999999999999 99999999765321 2244446554432 22 2233 4999999988653
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.099 Score=48.38 Aligned_cols=69 Identities=12% Similarity=0.123 Sum_probs=47.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCCC--CCchh----hhcc------CeeeecCCccccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTA--DHHDE----LINM------GITPSLKWTEATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~~--~~~~~----l~~~------~v~~d~~d~~~~~~~ 143 (267)
..||.|+|+ |.+|+.++-.|..+ +. ++..+|..+ ++... +... ++.....+.+.+.++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~--~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~da 80 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASG--ELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEAFKDV 80 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhC--CcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHHhCCC
Confidence 368999998 99999999999888 64 799999854 22221 1110 111112334688999
Q ss_pred CEEEEccCCCC
Q 024494 144 PYVIFCAPPSR 154 (267)
Q Consensus 144 D~Vi~~a~~~~ 154 (267)
|+||.+||..+
T Consensus 81 DvVVitAG~~~ 91 (323)
T TIGR01759 81 DAALLVGAFPR 91 (323)
T ss_pred CEEEEeCCCCC
Confidence 99999999754
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.093 Score=48.30 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=46.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCc--hhhhcc--Ceeee-c-CC---ccccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHH--DELINM--GITPS-L-KW---TEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~--~~l~~~--~v~~d-~-~d---~~~~~~~D~Vi~~a~~ 152 (267)
|||.|+|+ |.+|+.++-.|..+ + .++..++.+.... -++... ..... . .+ .+.++++|+||.+||.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~--~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~ 78 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLN--PLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGV 78 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCC
Confidence 68999998 99999999999888 6 4889898861111 112211 11111 1 22 3678999999999997
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 79 ~~ 80 (310)
T cd01337 79 PR 80 (310)
T ss_pred CC
Confidence 54
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.034 Score=51.10 Aligned_cols=66 Identities=15% Similarity=0.165 Sum_probs=48.1
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhc-c------CeeeecCCccccCCCCEEEEccCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN-M------GITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~-~------~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
||.|+|+|.+|+.++-.|+.+ +. ++..++.++++... +.. . .+.....|.+.++++|+||.+|+.
T Consensus 1 Ki~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~~y~~~~~aDivvitaG~ 78 (307)
T cd05290 1 KLVVIGAGHVGSAVLNYALAL--GLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAGDYDDCADADIIVITAGP 78 (307)
T ss_pred CEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEECCHHHhCCCCEEEECCCC
Confidence 689999999999999999888 64 79999987665422 111 0 112222345688999999999996
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 79 ~ 79 (307)
T cd05290 79 S 79 (307)
T ss_pred C
Confidence 4
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.0098 Score=50.29 Aligned_cols=35 Identities=17% Similarity=0.400 Sum_probs=30.4
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
||.|+|+|.+|+.++..++.. |++|+.++++++..
T Consensus 1 ~V~ViGaG~mG~~iA~~~a~~--G~~V~l~d~~~~~l 35 (180)
T PF02737_consen 1 KVAVIGAGTMGRGIAALFARA--GYEVTLYDRSPEAL 35 (180)
T ss_dssp EEEEES-SHHHHHHHHHHHHT--TSEEEEE-SSHHHH
T ss_pred CEEEEcCCHHHHHHHHHHHhC--CCcEEEEECChHHH
Confidence 689999999999999999999 99999999987654
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.022 Score=52.86 Aligned_cols=88 Identities=13% Similarity=0.197 Sum_probs=60.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CCcc---cc-CCCCEEEEccCCCCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWTE---AT-QKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~~---~~-~~~D~Vi~~a~~~~~~~ 157 (267)
-.+|+|+|+|-+|...++.+... |.+|++++|++++.+...+.|.+..+ .|++ .. +.+|+|+.+++ .. +
T Consensus 167 G~~V~I~G~GGlGh~avQ~Aka~--ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~--~ 241 (339)
T COG1064 167 GKWVAVVGAGGLGHMAVQYAKAM--GAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PA--T 241 (339)
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hh--h
Confidence 37899999999999888888889 99999999999988666666654432 2332 22 23999999998 32 1
Q ss_pred hHHHHHHHHHHhCCCCcEEEEcC
Q 024494 158 YPGDVRLAALSWNGEGSFLFTSS 180 (267)
Q Consensus 158 ~~~~~~~l~~~~~~v~r~V~~SS 180 (267)
+...++. .....+++.++-
T Consensus 242 ~~~~l~~----l~~~G~~v~vG~ 260 (339)
T COG1064 242 LEPSLKA----LRRGGTLVLVGL 260 (339)
T ss_pred HHHHHHH----HhcCCEEEEECC
Confidence 1122222 123467888764
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.029 Score=52.14 Aligned_cols=68 Identities=10% Similarity=0.174 Sum_probs=41.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhhh---cc----Ce-----eeec--CCccccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI---NM----GI-----TPSL--KWTEATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l~---~~----~v-----~~d~--~d~~~~~~~D~Vi~ 148 (267)
+||.|+|+ |++|+.|++.|.++ |..+|.++..+. .....+. .. +. ...+ .+++...++|+|+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~-~~~~l~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DvVf~ 79 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKH-PYFELAKVVASPRSAGKRYGEAVKWIEPGDMPEYVRDLPIVEPEPVASKDVDIVFS 79 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCceEEEEEEChhhcCCcchhhccccccCCCccccceeEEEeCCHHHhccCCEEEE
Confidence 58999996 99999999988776 457988884332 2111111 00 00 1111 12234578999999
Q ss_pred ccCCC
Q 024494 149 CAPPS 153 (267)
Q Consensus 149 ~a~~~ 153 (267)
|++..
T Consensus 80 a~p~~ 84 (341)
T TIGR00978 80 ALPSE 84 (341)
T ss_pred eCCHH
Confidence 88654
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.074 Score=49.51 Aligned_cols=35 Identities=29% Similarity=0.387 Sum_probs=31.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~ 119 (267)
...+|+|+|+|-+|+.+++.|... |. +|+.+|.+.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~a--Gvg~i~lvD~D~ 58 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRA--GVGKVTIVDRDY 58 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHc--CCCeEEEEeCCc
Confidence 347899999999999999999999 98 899998863
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.025 Score=51.42 Aligned_cols=69 Identities=25% Similarity=0.304 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhcc----Cee--ee-cCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINM----GIT--PS-LKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~----~v~--~d-~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++++|+|+|=.+++++..|++. | .+|+++.|+.++..++.+. +.. .. ..+.+....+|.|||+.+...
T Consensus 126 ~~~vlilGAGGAarAv~~aL~~~--g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm 202 (283)
T COG0169 126 GKRVLILGAGGAARAVAFALAEA--GAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGM 202 (283)
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHhhhcccccccccccccccccccCEEEECCCCCC
Confidence 37899999999999999999999 9 5899999999887776531 111 11 122222226999999987653
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.019 Score=48.64 Aligned_cols=67 Identities=16% Similarity=0.156 Sum_probs=49.1
Q ss_pred CeEEEEccc-HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc---CeeeecCCc---c-------ccCCCCEEEEcc
Q 024494 85 NDLLIVGPG-VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT---E-------ATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~GaG-~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~---~v~~d~~d~---~-------~~~~~D~Vi~~a 150 (267)
..|+++|+| -||+.++..|.+. |.+|+++.|+++....+.+. .+++...|. + ...-.|-+++-|
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~a--GA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA 85 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKA--GAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA 85 (245)
T ss_pred eEEEeecccccccHHHHHHHHhc--CCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence 679999996 5999999999999 99999999999887766532 244433332 1 223468888888
Q ss_pred CCC
Q 024494 151 PPS 153 (267)
Q Consensus 151 ~~~ 153 (267)
+..
T Consensus 86 gvA 88 (245)
T KOG1207|consen 86 GVA 88 (245)
T ss_pred hhh
Confidence 754
|
|
| >PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.029 Score=51.84 Aligned_cols=67 Identities=16% Similarity=0.074 Sum_probs=47.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHH-hcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~-~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|. .- |.+|.+.+|...... ....++.. .+. +.+.++|+|+.+++...
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~f--gm~V~~~~~~~~~~~-~~~~~~~~--~~l~ell~~sDvv~lh~plt~ 212 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGF--NMPILYNARRHHKEA-EERFNARY--CDLDTLLQESDFVCIILPLTD 212 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcC--CCEEEEECCCCchhh-HHhcCcEe--cCHHHHHHhCCEEEEeCCCCh
Confidence 3489999999999999999997 66 899999888643221 11223332 222 46789999998877553
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.14 Score=47.52 Aligned_cols=69 Identities=10% Similarity=0.073 Sum_probs=46.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCCCCC--chh----hhcc------CeeeecCCccccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HDE----LINM------GITPSLKWTEATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~~~~--~~~----l~~~------~v~~d~~d~~~~~~~ 143 (267)
++||.|+|+ |.+|+.++-.|... +. ++..+|.++.. ... +... .+.....+.+.+.++
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~--~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~da 81 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASG--DMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDA 81 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhh--hhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCC
Confidence 479999998 99999999998876 53 78889885431 211 1110 111112333688999
Q ss_pred CEEEEccCCCC
Q 024494 144 PYVIFCAPPSR 154 (267)
Q Consensus 144 D~Vi~~a~~~~ 154 (267)
|+||.+|+..+
T Consensus 82 DiVVitaG~~~ 92 (326)
T PRK05442 82 DVALLVGARPR 92 (326)
T ss_pred CEEEEeCCCCC
Confidence 99999999654
|
|
| >PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.055 Score=50.46 Aligned_cols=59 Identities=14% Similarity=0.097 Sum_probs=43.0
Q ss_pred cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 93 GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 93 G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
=|=|..++..|.+. ||+|++++|+++. .+.+...|+.....+.+...++|+||.|.+..
T Consensus 29 ~~gG~~MA~~La~a--G~~V~v~Dr~~~~l~~~~~~~l~~~Gi~~asd~~eaa~~ADvVIlaVP~~ 92 (342)
T PRK12557 29 PYGGSRMAIEFAEA--GHDVVLAEPNRSILSEELWKKVEDAGVKVVSDDAEAAKHGEIHILFTPFG 92 (342)
T ss_pred CcCHHHHHHHHHhC--CCeEEEEECCHHHhhHHHHHHHHHCCCEEeCCHHHHHhCCCEEEEECCCc
Confidence 46799999999999 9999999998762 22344455544333335678899999998754
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.095 Score=48.78 Aligned_cols=35 Identities=31% Similarity=0.393 Sum_probs=30.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~ 119 (267)
..++|+|+|+|-+|+++++.|... |+ +++.+|++.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~a--Gvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRA--GIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHc--CCCEEEEEcCCc
Confidence 347899999999999999999999 97 788888863
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 267 | |||
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 2e-18 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 1e-14 |
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 2e-18
Identities = 33/158 (20%), Positives = 62/158 (39%), Gaps = 18/158 (11%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
+LI G G LG +A + + G ++ G +A + + + +
Sbjct: 6 ILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQPMPAGVQ-TLIADVTRPDTLASIVHL 62
Query: 145 ---YVIFCAPPSRSLD------YPGDVR--LAALSWNGEGSFLFTSSSAIYDCSDNGACD 193
+++C S D Y +R L+AL F SS+ +Y D
Sbjct: 63 RPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLD 122
Query: 194 EDSPVVPIGRSPRTDVLLKAEKVILEFGGCVLRLAGLY 231
ED+P + + +L+AE ++ + +LR +G+Y
Sbjct: 123 EDTPPIA--KDFSGKRMLEAEALLAAYSSTILRFSGIY 158
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 71.1 bits (174), Expect = 1e-14
Identities = 37/157 (23%), Positives = 58/157 (36%), Gaps = 21/157 (13%)
Query: 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFP-- 144
LL G G R+++ + G +I G + D + + G P L W
Sbjct: 8 LLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEP-LLWPGEEPSLDGV 64
Query: 145 -YVIFCAPPSRSLDYPGDVRLAALSW------NGEGSFLFTSSSAIYDCSDNGACDEDSP 197
+++ P GD LAAL + S++A+Y D DE +P
Sbjct: 65 THLLISTAPDSG----GDPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTP 120
Query: 198 VVPIGRSPRTDVLLKAEKVILEFGGC---VLRLAGLY 231
+ P + R + AE+ V RLAG+Y
Sbjct: 121 LTP--TAARGRWRVMAEQQWQAVPNLPLHVFRLAGIY 155
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 267 | |||
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.95 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.92 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.91 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.9 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.9 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.89 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.89 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.89 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.88 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.88 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.88 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.87 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.87 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.87 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.87 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.86 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.86 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.86 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.86 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.85 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.85 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.85 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.85 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.85 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.85 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.85 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.85 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.85 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.85 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.85 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.85 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.84 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.84 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.84 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.84 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.84 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.83 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.83 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.83 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.83 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.82 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.82 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.82 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.81 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.81 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.81 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.81 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.81 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.81 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.8 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.8 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.8 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.79 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.79 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.79 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.79 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.79 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.79 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.77 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.77 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.76 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.76 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.76 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.76 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.76 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.76 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.76 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.75 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.75 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.75 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.74 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.73 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.73 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.72 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.71 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.71 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.71 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.7 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.69 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.68 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.68 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.67 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.65 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.61 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.58 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.54 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.54 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.53 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.51 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.51 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.4 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.37 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.37 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.34 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.34 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.33 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.33 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.31 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.31 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.3 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.29 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.28 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.27 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.27 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.27 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.27 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.26 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.26 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.26 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.26 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.25 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.25 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.25 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.24 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.22 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.22 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.22 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.22 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.22 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.22 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.21 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.21 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.21 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.21 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.21 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.21 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.21 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.21 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.2 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.19 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.18 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.18 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.18 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.18 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.17 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.17 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.17 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.17 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.17 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.17 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.17 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.17 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.17 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.16 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.16 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.16 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.16 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.15 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.15 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.15 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.15 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.15 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.15 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.15 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.15 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.14 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.14 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.14 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.14 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.14 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.14 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.13 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.13 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.13 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.12 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.12 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.12 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.12 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.11 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.11 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.11 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.1 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.1 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.1 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.1 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.1 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.09 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.09 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.09 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.09 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.09 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.09 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.08 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.08 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.08 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.08 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.07 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.07 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.07 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.07 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.07 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.05 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.05 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.05 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.04 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.04 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.04 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.04 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.03 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.03 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.03 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.03 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.03 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.03 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.03 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.02 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.02 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.02 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.02 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.02 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.02 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.02 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.02 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.01 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.01 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.01 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.01 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.01 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.99 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 98.99 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.99 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 98.99 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 98.99 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 98.98 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.98 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.98 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.98 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 98.97 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 98.97 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 98.97 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 98.96 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.96 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 98.96 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 98.96 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 98.96 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.95 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 98.95 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 98.95 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.94 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 98.94 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.93 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 98.93 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 98.93 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 98.92 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.92 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.92 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 98.91 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 98.91 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.91 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 98.9 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 98.9 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.9 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 98.9 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 98.9 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.9 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 98.89 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 98.89 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 98.89 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 98.88 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 98.87 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.87 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 98.86 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 98.85 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 98.85 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 98.84 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.83 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 98.83 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.83 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.81 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 98.79 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 98.77 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.77 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 98.76 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.76 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 98.76 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.75 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 98.75 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.74 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.74 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 98.72 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.71 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 98.69 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 98.67 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 98.66 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.65 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.63 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.47 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.46 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.42 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.41 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.39 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.38 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.38 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.36 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.35 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.35 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.31 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.3 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.29 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.24 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.22 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.22 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.2 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.18 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 98.17 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 98.17 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 98.17 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 98.16 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 98.16 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 98.16 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 98.15 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 98.14 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 98.13 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 98.12 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.11 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 98.11 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.09 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 98.09 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 98.09 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 98.08 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 98.06 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 98.06 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 98.06 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 98.04 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 98.01 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.0 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.99 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.99 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.97 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.97 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.95 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.95 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.93 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.92 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.9 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 97.89 | |
| 3i83_A | 320 | 2-dehydropantoate 2-reductase; structural genomics | 97.89 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.88 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.88 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 97.88 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.88 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 97.88 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.87 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 97.86 | |
| 3ego_A | 307 | Probable 2-dehydropantoate 2-reductase; structural | 97.86 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.86 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 97.85 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.85 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.83 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 97.82 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.82 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 97.82 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.81 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.81 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.8 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 97.79 | |
| 1z82_A | 335 | Glycerol-3-phosphate dehydrogenase; TM0378, struct | 97.79 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.79 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.78 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 97.77 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.76 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.76 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 97.75 | |
| 3hn2_A | 312 | 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str | 97.75 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.75 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.74 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 97.71 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.71 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 97.69 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.69 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.67 | |
| 3ghy_A | 335 | Ketopantoate reductase protein; oxidoreductase, NA | 97.67 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 97.66 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.66 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.66 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.66 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.65 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.65 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.64 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.64 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.64 | |
| 3hwr_A | 318 | 2-dehydropantoate 2-reductase; YP_299159.1, PANE/A | 97.62 | |
| 3ojo_A | 431 | CAP5O; rossmann fold, complex with cofactor NAD an | 97.62 | |
| 2yjz_A | 201 | Metalloreductase steap4; oxidoreductase, metabolic | 96.79 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 97.6 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.6 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 97.58 | |
| 3g17_A | 294 | Similar to 2-dehydropantoate 2-reductase; structur | 97.58 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.58 | |
| 2rcy_A | 262 | Pyrroline carboxylate reductase; malaria, structur | 97.58 | |
| 1dlj_A | 402 | UDP-glucose dehydrogenase; rossmann fold, ternary | 97.57 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.54 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.5 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.5 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 97.49 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 97.49 | |
| 2qyt_A | 317 | 2-dehydropantoate 2-reductase; APC81190, porphyrom | 97.49 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.48 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.48 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.48 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.47 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.47 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 97.46 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 97.46 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.45 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.44 | |
| 2p4q_A | 497 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.43 | |
| 1zcj_A | 463 | Peroxisomal bifunctional enzyme; peroxisomal multi | 97.43 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.43 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.42 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.42 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.41 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.41 | |
| 2zyd_A | 480 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.41 | |
| 1x0v_A | 354 | GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase | 97.41 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.41 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.41 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.39 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.39 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.39 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.37 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 97.37 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.37 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 97.35 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.34 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.34 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.32 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.32 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.31 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.31 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.31 | |
| 2iz1_A | 474 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.31 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.3 | |
| 3k6j_A | 460 | Protein F01G10.3, confirmed by transcript evidenc; | 97.3 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.27 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 97.27 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 97.27 | |
| 3gvx_A | 290 | Glycerate dehydrogenase related protein; NYSGXRC, | 97.24 | |
| 1pgj_A | 478 | 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o | 97.23 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 97.22 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.22 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.21 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.21 | |
| 3evt_A | 324 | Phosphoglycerate dehydrogenase; structural genomic | 97.21 | |
| 3c7a_A | 404 | Octopine dehydrogenase; L) stereospecific opine de | 97.2 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.18 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 97.17 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 97.16 | |
| 4dgs_A | 340 | Dehydrogenase; structural genomics, PSI-biology, N | 97.16 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 97.16 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 97.16 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.15 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.14 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.13 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.12 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.11 | |
| 4g2n_A | 345 | D-isomer specific 2-hydroxyacid dehydrogenase, Na; | 97.11 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.09 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.09 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 97.08 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 97.07 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.07 | |
| 3ba1_A | 333 | HPPR, hydroxyphenylpyruvate reductase; two domain | 97.06 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.05 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.05 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 97.05 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 97.05 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.04 | |
| 3mog_A | 483 | Probable 3-hydroxybutyryl-COA dehydrogenase; struc | 97.03 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.02 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 97.01 | |
| 2pi1_A | 334 | D-lactate dehydrogenase; oxidoreductase, D-LDH, NA | 97.0 | |
| 2i76_A | 276 | Hypothetical protein; NADP, dehydrogenase, TM1727, | 97.0 | |
| 3hg7_A | 324 | D-isomer specific 2-hydroxyacid dehydrogenase FAM | 97.0 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.0 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.99 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.97 | |
| 2yq5_A | 343 | D-isomer specific 2-hydroxyacid dehydrogenase; oxi | 96.97 | |
| 1qp8_A | 303 | Formate dehydrogenase; oxidoreductase; HET: NDP; 2 | 96.95 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.94 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.94 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 96.94 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 96.93 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.92 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.92 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 96.92 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.91 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.91 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.9 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 96.9 | |
| 2cuk_A | 311 | Glycerate dehydrogenase/glyoxylate reductase; stru | 96.89 | |
| 3eag_A | 326 | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME | 96.88 | |
| 1xea_A | 323 | Oxidoreductase, GFO/IDH/MOCA family; structural ge | 96.87 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.85 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 96.85 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.83 | |
| 1mx3_A | 347 | CTBP1, C-terminal binding protein 1; nuclear prote | 96.82 |
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=208.69 Aligned_cols=177 Identities=20% Similarity=0.223 Sum_probs=140.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCccccCCCCEEEEccCCCCCCC-h
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWTEATQKFPYVIFCAPPSRSLD-Y 158 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~~~~~~~D~Vi~~a~~~~~~~-~ 158 (267)
|||+|||||+|+||++|+++|+++ |++|++++|++.+...+...+++. |+.|.+ +.++|+|||+|+.....+ .
T Consensus 4 m~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-~~~~d~vi~~a~~~~~~~~~ 80 (286)
T 3ius_A 4 MTGTLLSFGHGYTARVLSRALAPQ--GWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-LDGVTHLLISTAPDSGGDPV 80 (286)
T ss_dssp -CCEEEEETCCHHHHHHHHHHGGG--TCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-CTTCCEEEECCCCBTTBCHH
T ss_pred CcCcEEEECCcHHHHHHHHHHHHC--CCEEEEEEcChhhhhhHhhCCCeEEEecccccc-cCCCCEEEECCCccccccHH
Confidence 678999999999999999999999 999999999987766555455544 455555 889999999999765432 2
Q ss_pred HHHHHHHHHHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-C--eeEEeeCccccCC
Q 024494 159 PGDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-G--GCVLRLAGLYISL 234 (267)
Q Consensus 159 ~~~~~~l~~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-~--~~IlR~~~iyGp~ 234 (267)
...+...+.+. .++++|||+||.+|||...+.+++|++|..|. +.|+.+|+++|++++++ + ++|+||+++||++
T Consensus 81 ~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~ 158 (286)
T 3ius_A 81 LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT--AARGRWRVMAEQQWQAVPNLPLHVFRLAGIYGPG 158 (286)
T ss_dssp HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC--SHHHHHHHHHHHHHHHSTTCCEEEEEECEEEBTT
T ss_pred HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC--CHHHHHHHHHHHHHHhhcCCCEEEEeccceECCC
Confidence 22233332222 57899999999999998877789999998884 69999999999999998 5 9999999999999
Q ss_pred chHHHHH-hCCcceecCCCccccHHHHHHhh
Q 024494 235 CYLVEKF-QGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 235 ~~~l~~~-~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
...+..+ +|.+..+.+++++.++||.-+++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 189 (286)
T 3ius_A 159 RGPFSKLGKGGIRRIIKPGQVFSRIHVEDIA 189 (286)
T ss_dssp BSSSTTSSSSCCCEEECTTCCBCEEEHHHHH
T ss_pred chHHHHHhcCCccccCCCCcccceEEHHHHH
Confidence 6656555 47766666667888999876554
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-24 Score=189.55 Aligned_cols=174 Identities=16% Similarity=0.052 Sum_probs=130.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~ 154 (267)
|||+|||||+ |+||++|+++|+++ |++|++++|++.... +. +++ .|+. + +.++++|+|||+|+...
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~ 74 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKND--GNTPIILTRSIGNKA-IN--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRG 74 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCCccc-CC--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCC
Confidence 5689999996 99999999999999 999999999854433 32 333 3444 3 35679999999999754
Q ss_pred CCC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C
Q 024494 155 SLD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G 221 (267)
Q Consensus 155 ~~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~ 221 (267)
..+ ++.++++++. ...++++|||+||.++||.....+++|++|..|. +.|+.+|.++|++++++ +
T Consensus 75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~g 152 (311)
T 3m2p_A 75 SQGKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPD--LMYGVSKLACEHIGNIYSRKKG 152 (311)
T ss_dssp SSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCS--SHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHcC
Confidence 321 3445566653 2357899999999999998777889999988884 69999999999998874 4
Q ss_pred --eeEEeeCccccCCc-------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 222 --GCVLRLAGLYISLC-------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 222 --~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
++|+||+.+|||+. .+++.+ +|.++.+. .+.+..++||.-+++
T Consensus 153 ~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva 206 (311)
T 3m2p_A 153 LCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA 206 (311)
T ss_dssp CEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred CCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence 89999999999983 233444 37777663 455778888876554
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-24 Score=191.28 Aligned_cols=174 Identities=20% Similarity=0.275 Sum_probs=132.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccCC-CCEEEEccCCCCC---
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQK-FPYVIFCAPPSRS--- 155 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~~-~D~Vi~~a~~~~~--- 155 (267)
||+|||||+|+||++|+++|+++ |++|++++|+++....- -.-+..|+.|++ .+.+ +|+|||+|+....
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~-~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~~~ 79 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQ--GHEVTGLRRSAQPMPAG-VQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSDE 79 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEEECTTSCCCTT-CCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC--
T ss_pred CCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCccccccC-CceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCCHH
Confidence 57999999999999999999999 99999999987654211 012344666553 3444 9999999985321
Q ss_pred ---CChHHHHHHHHHHh--CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH-cCeeEEeeCc
Q 024494 156 ---LDYPGDVRLAALSW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE-FGGCVLRLAG 229 (267)
Q Consensus 156 ---~~~~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~-~~~~IlR~~~ 229 (267)
..++.++.+++.+. .++++|||+||.+|||...+.+++|++|..|. +.|+.+|.++|++ ++ ..++|+||++
T Consensus 80 ~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~-~~~~~~~ilR~~~ 156 (286)
T 3gpi_A 80 HYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAK--DFSGKRMLEAEAL-LAAYSSTILRFSG 156 (286)
T ss_dssp ---CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCC--SHHHHHHHHHHHH-GGGSSEEEEEECE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCC--ChhhHHHHHHHHH-HhcCCeEEEeccc
Confidence 12566677775433 46899999999999998877889999998874 6999999999999 66 3599999999
Q ss_pred cccCCc-hHHHHHhCCcceecCCCccccHHHHHHhh
Q 024494 230 LYISLC-YLVEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 230 iyGp~~-~~l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+|||+. .++..+.. ......+.++.++||.-+++
T Consensus 157 v~G~~~~~~~~~~~~-~~~~~~~~~~~~~i~v~Dva 191 (286)
T 3gpi_A 157 IYGPGRLRMIRQAQT-PEQWPARNAWTNRIHRDDGA 191 (286)
T ss_dssp EEBTTBCHHHHHTTC-GGGSCSSBCEECEEEHHHHH
T ss_pred ccCCCchhHHHHHHh-cccCCCcCceeEEEEHHHHH
Confidence 999995 46666644 33334455778888866554
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=188.44 Aligned_cols=178 Identities=15% Similarity=0.060 Sum_probs=131.5
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhc-------cCee---eecCCc----cccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-------MGIT---PSLKWT----EATQKF 143 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~-------~~v~---~d~~d~----~~~~~~ 143 (267)
++|+|||||+ |+||++|+++|+++ |++|++++|++..... +.. .+++ .|+.|+ +.+.++
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKL--NQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 3589999996 99999999999999 9999999997654321 111 2333 455554 356799
Q ss_pred CEEEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 144 PYVIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
|+|||+|+..... + ++.++.+++. ...++++|||+||.++||.....+++|++|..|. +.|+.+|
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK 179 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPL--SPYAVTK 179 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCC--ChhHHHH
Confidence 9999999975321 1 2233444443 2347899999999999998877889999998874 6999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCccccCCc-----------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 211 LKAEKVILEF----G--GCVLRLAGLYISLC-----------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 211 ~~aE~~l~~~----~--~~IlR~~~iyGp~~-----------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
.++|++++.+ + ++|+||+++|||+. .++..+ ++.++.+. ++.++.++||..+++
T Consensus 180 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 252 (351)
T 3ruf_A 180 YVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVI 252 (351)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHH
Confidence 9999988764 4 89999999999972 233444 47776554 455788888866543
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-23 Score=185.60 Aligned_cols=170 Identities=16% Similarity=0.057 Sum_probs=124.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCCCC------C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSL------D 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~~~------~ 157 (267)
|||||||+ ||||++|+++|+++ ||+|++++|++... .+.++..+.+.+.++|+|||+|+..... +
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~--G~~V~~l~R~~~~~------~~~~~~~~~~~l~~~d~vihla~~~i~~~~~~~~~ 72 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNAR--GHEVTLVSRKPGPG------RITWDELAASGLPSCDAAVNLAGENILNPLRRWNE 72 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTT------EEEHHHHHHHCCCSCSEEEECCCCCSSCTTSCCCH
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCcC------eeecchhhHhhccCCCEEEEeccCcccchhhhhhh
Confidence 78999996 99999999999999 99999999987542 2334434445678999999999854211 1
Q ss_pred ---------hHHHHHHHHH--HhC--CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc--C-
Q 024494 158 ---------YPGDVRLAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF--G- 221 (267)
Q Consensus 158 ---------~~~~~~~l~~--~~~--~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~--~- 221 (267)
+++.+++++. +.. ...+||+.||+++||...+.+++|++|..+. +.|++.+..+|...... +
T Consensus 73 ~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~--~~~~~~~~~~e~~~~~~~~~~ 150 (298)
T 4b4o_A 73 TFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDF--DFFSNLVTKWEAAARLPGDST 150 (298)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCS--SHHHHHHHHHHHHHCCSSSSS
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCcccc--chhHHHHHHHHHHHHhhccCC
Confidence 1233444432 223 3456999999999999888899999998774 56777777777654332 2
Q ss_pred -eeEEeeCccccCCch----HHHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 222 -GCVLRLAGLYISLCY----LVEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 222 -~~IlR~~~iyGp~~~----~l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
++++|++.+|||+.. ++...+ +....++++.++.++||..+++
T Consensus 151 ~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva 199 (298)
T 4b4o_A 151 RQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLA 199 (298)
T ss_dssp EEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHH
T ss_pred ceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHH
Confidence 899999999999843 333333 6666667778999999976543
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4e-22 Score=178.18 Aligned_cols=175 Identities=16% Similarity=0.126 Sum_probs=125.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCcc---ccCCCCEEEEccCCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWTE---ATQKFPYVIFCAPPSRSL- 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~~---~~~~~D~Vi~~a~~~~~~- 156 (267)
|+|||||+ |+||++|+++|+++ |++|++++|++.........+++ .|+.|.+ .+.+ |+|||+|+.....
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~~~~~~~ 77 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVEL--GYEVVVVDNLSSGRREFVNPSAELHVRDLKDYSWGAGIKG-DVVFHFAANPEVRL 77 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSCCGGGSCTTSEEECCCTTSTTTTTTCCC-SEEEECCSSCSSSG
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCCchhhcCCCceEEECccccHHHHhhcCC-CEEEECCCCCCchh
Confidence 68999996 99999999999999 99999999987665443333333 3455542 3344 9999999964321
Q ss_pred ---C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----
Q 024494 157 ---D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---- 220 (267)
Q Consensus 157 ---~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~---- 220 (267)
+ ++.++.+++. ...++++|||+||.++||.....+++|+.|..|. +.|+.+|.++|++++.+
T Consensus 78 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~--~~Y~~sK~~~e~~~~~~~~~~ 155 (312)
T 3ko8_A 78 STTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPI--SVYGAAKAAGEVMCATYARLF 155 (312)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHh
Confidence 1 2333444443 2347899999999999998877889999988774 69999999999988764
Q ss_pred C--eeEEeeCccccCCc------hHHHHH-hC-Cccee-cCCCccccHHHHHHhh
Q 024494 221 G--GCVLRLAGLYISLC------YLVEKF-QG-LPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 221 ~--~~IlR~~~iyGp~~------~~l~~~-~g-~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
+ ++++||+++|||+. .++..+ ++ .++.+ +.+.++.++||.-+++
T Consensus 156 g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 210 (312)
T 3ko8_A 156 GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAV 210 (312)
T ss_dssp CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHH
T ss_pred CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHH
Confidence 4 89999999999972 344444 34 34433 3445778888866543
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-22 Score=178.76 Aligned_cols=177 Identities=13% Similarity=0.004 Sum_probs=124.5
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~ 154 (267)
+||+|||||+ |+||++|+++|+++ |++|++++|++.+...+...+++ .|+.|+ +.++++|+|||+|+...
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~ 89 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAA--GHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYP 89 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence 3579999996 99999999999999 99999999988776554432433 455554 35678999999998643
Q ss_pred C--C---C----hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCC-CccCCCCCCCCCC--CCHHHHHHHHHHHHHHHc
Q 024494 155 S--L---D----YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDN-GACDEDSPVVPIG--RSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 155 ~--~---~----~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~-~~~~E~~p~~p~~--~~~y~~~k~~aE~~l~~~ 220 (267)
. . + ++.+..+++.+ ..++++|||+||.++|+.... ...+|++|..|.. .+.|+.+|.++|++++++
T Consensus 90 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~ 169 (342)
T 2x4g_A 90 SRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQ 169 (342)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHH
Confidence 2 1 1 23445555432 247899999999999987543 1338998887721 368999999999998773
Q ss_pred ---C--eeEEeeCccccCCc------hHHHHH-hCCcceecCCCccccHHHHHHh
Q 024494 221 ---G--GCVLRLAGLYISLC------YLVEKF-QGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 221 ---~--~~IlR~~~iyGp~~------~~l~~~-~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
+ ++++||+.+||++. .+++.+ +|.+..+ +.+..+++|..++
T Consensus 170 ~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dv 222 (342)
T 2x4g_A 170 ARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY--VAGQRNVIDAAEA 222 (342)
T ss_dssp HHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE--ECCEEEEEEHHHH
T ss_pred hhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc--cCCCcceeeHHHH
Confidence 4 99999999999975 244555 3665544 3456677775544
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.1e-23 Score=187.78 Aligned_cols=179 Identities=15% Similarity=0.136 Sum_probs=129.5
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe---eeecC-Cc----cccCCCCEEEEccC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI---TPSLK-WT----EATQKFPYVIFCAP 151 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v---~~d~~-d~----~~~~~~D~Vi~~a~ 151 (267)
.+||+|||||+ ||||++|+++|+++ +|++|++++|++++...+.. .++ ..|+. |. +.+.++|+|||+|+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILET-TDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHH-SSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhC-CCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 45689999996 99999999999987 37999999999877655432 343 34666 54 24568999999999
Q ss_pred CCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCC-------CCCCCCHHHHHHH
Q 024494 152 PSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV-------VPIGRSPRTDVLL 211 (267)
Q Consensus 152 ~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~-------~p~~~~~y~~~k~ 211 (267)
...... ++.++.+++. ...+ ++|||+||.+|||.....+++|+++. .| .+.|+.+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p--~~~Y~~sK~ 177 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKP--RWIYACSKQ 177 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCT--THHHHHHHH
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCC--CCcHHHHHH
Confidence 764311 1112233432 2236 89999999999998776777777754 23 358999999
Q ss_pred HHHHHHHHc---C--eeEEeeCccccCCc---------------hHHHHH-hCCcceecC-CCccccHHHHHHhh
Q 024494 212 KAEKVILEF---G--GCVLRLAGLYISLC---------------YLVEKF-QGLPLLLKS-PGIFSANWHYICVK 264 (267)
Q Consensus 212 ~aE~~l~~~---~--~~IlR~~~iyGp~~---------------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~~ 264 (267)
++|++++++ + ++|+||+++|||+. .++..+ +|.++.+.+ +.++.++||.-+++
T Consensus 178 ~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 252 (372)
T 3slg_A 178 LMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGI 252 (372)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHH
Confidence 999999887 5 89999999999973 233444 477776543 45778888866553
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=175.87 Aligned_cols=176 Identities=16% Similarity=0.134 Sum_probs=122.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCc---cccCCCCEEEEccCCCCC-
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWT---EATQKFPYVIFCAPPSRS- 155 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~---~~~~~~D~Vi~~a~~~~~- 155 (267)
||+|||||+ |+||++|+++|+++ | +|+++++...........++ ..|+.|. +.+.++|+|||+|+....
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~d~vih~a~~~~~~ 77 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSES--N-EIVVIDNLSSGNEEFVNEAARLVKADLAADDIKDYLKGAEEVWHIAANPDVR 77 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTT--S-CEEEECCCSSCCGGGSCTTEEEECCCTTTSCCHHHHTTCSEEEECCCCCCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--C-CEEEEEcCCCCChhhcCCCcEEEECcCChHHHHHHhcCCCEEEECCCCCChh
Confidence 689999996 99999999999999 8 55555554332222222233 3345442 346799999999985432
Q ss_pred ---CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc---
Q 024494 156 ---LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF--- 220 (267)
Q Consensus 156 ---~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~--- 220 (267)
.+ ++.++.+++. ...++++|||+||.++||.....+++|+.|..|. +.|+.+|.++|++++.+
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~~ 155 (313)
T 3ehe_A 78 IGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPI--SLYGASKLACEALIESYCHT 155 (313)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHh
Confidence 12 2333444433 2347899999999999998877889999988774 68999999999988764
Q ss_pred -C--eeEEeeCccccCCc------hHHHHH-hC-Cccee-cCCCccccHHHHHHhh
Q 024494 221 -G--GCVLRLAGLYISLC------YLVEKF-QG-LPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 221 -~--~~IlR~~~iyGp~~------~~l~~~-~g-~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
+ ++++||+++|||+. .++..+ ++ .++.+ +.+.++.++||.-+++
T Consensus 156 ~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 211 (313)
T 3ehe_A 156 FDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV 211 (313)
T ss_dssp TTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHH
T ss_pred cCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHH
Confidence 4 89999999999972 244444 44 44433 4455788888876554
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=179.35 Aligned_cols=162 Identities=16% Similarity=0.203 Sum_probs=122.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccC--CCCEEEEccCCCCC--
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRS-- 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~--~~D~Vi~~a~~~~~-- 155 (267)
|+|||||+ |+||++|+++|+++ |++|++++|.. .|+.|+ +.+. ++|+|||+|+....
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~ 71 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPE--EYDIYPFDKKL------------LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQ 71 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTT--TEEEEEECTTT------------SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCEEEEecccc------------cCCCCHHHHHHHHHhcCCCEEEECCcccChHH
Confidence 49999996 99999999999999 99999999932 233333 1233 79999999997642
Q ss_pred --CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--e
Q 024494 156 --LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (267)
Q Consensus 156 --~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~ 222 (267)
.+ ++.++.+++.+ ..++ +|||+||.++||...+.+++|++|..|. +.|+.+|.++|++++.+. +
T Consensus 72 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~ 148 (287)
T 3sc6_A 72 AEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPI--NIYGASKYAGEQFVKELHNKY 148 (287)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSSE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHhCCCc
Confidence 11 22234444432 2355 7999999999998877889999998874 699999999999999986 8
Q ss_pred eEEeeCccccCC-c----hHHHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 223 CVLRLAGLYISL-C----YLVEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 223 ~IlR~~~iyGp~-~----~~l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+++||+.+|||+ . .+++.+. +.++.+.++ ++.++||.-+++
T Consensus 149 ~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~Dva 195 (287)
T 3sc6_A 149 FIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVAD-QIGSPTYVADLN 195 (287)
T ss_dssp EEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECS-CEECCEEHHHHH
T ss_pred EEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecC-cccCceEHHHHH
Confidence 999999999997 2 3334443 666665543 677888866554
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=180.23 Aligned_cols=175 Identities=17% Similarity=0.086 Sum_probs=126.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC----Cchhhhc----cCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD----HHDELIN----MGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~----~~~~l~~----~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+||+|||||+ |+||++|+++|+++ |++|++++|++. ....+.. .+++.... .+.++|+|||+|+..
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---Dl~~~d~vi~~a~~~ 80 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVAS--GEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEER---DLSDVRLVYHLASHK 80 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHH---HHTTEEEEEECCCCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcccccchhhhhhhccCCCeeEEeC---ccccCCEEEECCccC
Confidence 5689999996 99999999999999 999999999865 2222211 01111111 223899999999865
Q ss_pred CC-------CC---hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-
Q 024494 154 RS-------LD---YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (267)
Q Consensus 154 ~~-------~~---~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~- 220 (267)
.. .+ ++.+..+++. ...++++|||+||.++||.....+++|++|..|. +.|+.+|.++|++++.+
T Consensus 81 ~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~ 158 (321)
T 3vps_A 81 SVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR--SPYAASKVGLEMVAGAHQ 158 (321)
T ss_dssp CHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC--ChhHHHHHHHHHHHHHHH
Confidence 31 11 2334445543 2347899999999999998877889999998874 69999999999998874
Q ss_pred ------CeeEEeeCccccCCc-------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 221 ------GGCVLRLAGLYISLC-------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 221 ------~~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
.++|+||+.+|||+. .++..+ .+.++.+. ++.+..++||..+++
T Consensus 159 ~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva 217 (321)
T 3vps_A 159 RASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVV 217 (321)
T ss_dssp HSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHH
T ss_pred HHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHH
Confidence 379999999999982 233444 46665543 455778888866554
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-22 Score=179.40 Aligned_cols=142 Identities=23% Similarity=0.251 Sum_probs=108.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccCCCCEEEEccCCCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~~~D~Vi~~a~~~~~~~ 157 (267)
.+|+|||||+ |+||++|+++|+++ |++|++++|++.. ..+ ..+..|+.|+ +.+.++|+|||+|+......
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~~--~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~ 92 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQ--GRTVRGFDLRPSG-TGG--EEVVGSLEDGQALSDAIMGVSAVLHLGAFMSWAP 92 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHT--TCCEEEEESSCCS-SCC--SEEESCTTCHHHHHHHHTTCSEEEECCCCCCSSG
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC--CCEEEEEeCCCCC-CCc--cEEecCcCCHHHHHHHHhCCCEEEECCcccCcch
Confidence 4589999996 99999999999999 9999999998765 111 1234566664 35679999999999765332
Q ss_pred ---------hHHHHHHHHH--HhCCCCcEEEEcCCccccC--CCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----
Q 024494 158 ---------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDC--SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF---- 220 (267)
Q Consensus 158 ---------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~--~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~---- 220 (267)
++.++.+++. ...++++|||+||.+|||. ....+++|++|..|. +.|+.+|.++|++++.+
T Consensus 93 ~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~~~~~~~~~~ 170 (347)
T 4id9_A 93 ADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN--SPYGLTKLLGEELVRFHQRSG 170 (347)
T ss_dssp GGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC--ChHHHHHHHHHHHHHHHHHhc
Confidence 2233444443 2357899999999999998 455689999988774 69999999999998754
Q ss_pred C--eeEEeeCccc
Q 024494 221 G--GCVLRLAGLY 231 (267)
Q Consensus 221 ~--~~IlR~~~iy 231 (267)
+ ++|+||+.+|
T Consensus 171 ~~~~~ilRp~~v~ 183 (347)
T 4id9_A 171 AMETVILRFSHTQ 183 (347)
T ss_dssp SSEEEEEEECEEE
T ss_pred CCceEEEccceEe
Confidence 3 8999999999
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=177.43 Aligned_cols=178 Identities=15% Similarity=0.121 Sum_probs=126.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCC--Cchhhhc----cCe---eeecCCcc----ccCC--CC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTAD--HHDELIN----MGI---TPSLKWTE----ATQK--FP 144 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~--~~~~l~~----~~v---~~d~~d~~----~~~~--~D 144 (267)
.||+|||||+ |+||++|+++|+++ | ++|++++|... ....+.. .++ ..|+.|++ .+.+ +|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 100 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQS--YETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ 100 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHH--CTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCccHHHHHHHHHHHhh--CCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence 3589999996 99999999999999 8 78899988642 2222211 133 34555542 3444 99
Q ss_pred EEEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCC-CCCccCCCCCCCCCCCCHHHHHH
Q 024494 145 YVIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 145 ~Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~-~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
+|||+|+..... + ++.++.+++. ...++++|||+||.+|||.. ...+++|++|..|. +.|+.+|
T Consensus 101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~--~~Y~~sK 178 (346)
T 4egb_A 101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPN--SPYSSSK 178 (346)
T ss_dssp EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCC--SHHHHHH
T ss_pred EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCC--ChhHHHH
Confidence 999999965422 1 2233445543 23478999999999999986 45689999998874 6999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCccccCCc-------hHHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 211 LKAEKVILEF----G--GCVLRLAGLYISLC-------YLVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 211 ~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
.++|++++++ + ++++||+.+|||+. .++..+ +|.++.+ +.+.+..++||.-+++
T Consensus 179 ~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 247 (346)
T 4egb_A 179 ASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHC 247 (346)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHH
Confidence 9999998874 4 89999999999973 234444 4776655 4455778888866543
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-21 Score=176.83 Aligned_cols=176 Identities=15% Similarity=0.093 Sum_probs=127.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHh--cCCCCeEEEEeCCCC-------------CchhhhccC---eeeecCCcc----c
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQ--EHPGCQIYGQTMTAD-------------HHDELINMG---ITPSLKWTE----A 139 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~--~~pG~~V~~l~R~~~-------------~~~~l~~~~---v~~d~~d~~----~ 139 (267)
.+|+|||||+ |+||++|+++|++ + |++|++++|++. ....+...+ +..|+.|++ .
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 86 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHP--KAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL 86 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCT--TSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCC--CCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence 4589999986 9999999999999 8 999999999654 111121122 234565542 3
Q ss_pred -cCCCCEEEEccCCCCC--CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 140 -TQKFPYVIFCAPPSRS--LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 140 -~~~~D~Vi~~a~~~~~--~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
..++|+|||+|+.... .+ ++.++.+++.+ ..+++ |||+||.++||.... +++|+++..|. +.|+
T Consensus 87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~-~~~E~~~~~p~--~~Y~ 162 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKA-PNVVGKNESPE--NVYG 162 (362)
T ss_dssp TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCS-SBCTTSCCCCS--SHHH
T ss_pred hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCC-CCCCCCCCCCC--ChhH
Confidence 6789999999996542 22 22344455432 23555 999999999998765 89999988884 7999
Q ss_pred HHHHHHHHHHHHcC----eeEEeeCccccCCc-------h----HHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 208 DVLLKAEKVILEFG----GCVLRLAGLYISLC-------Y----LVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 208 ~~k~~aE~~l~~~~----~~IlR~~~iyGp~~-------~----~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
.+|.++|++++.+. ++++||+++|||+. . ++..+ ++.++.+ +.+.++.++||.-+++
T Consensus 163 ~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 236 (362)
T 3sxp_A 163 FSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVI 236 (362)
T ss_dssp HHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHH
T ss_pred HHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHH
Confidence 99999999999875 89999999999983 2 23334 3666654 3445778888866554
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-21 Score=175.99 Aligned_cols=147 Identities=16% Similarity=0.167 Sum_probs=111.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-------ccCe---eeecCCcc----ccC--CCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMGI---TPSLKWTE----ATQ--KFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-------~~~v---~~d~~d~~----~~~--~~D~V 146 (267)
+|+|||||+ |+||++|+++|+++ |++|++++|+........ ..++ ..|+.|++ .+. ++|+|
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 82 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAH--GYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAA 82 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEE
T ss_pred CcEEEEecCCcHHHHHHHHHHHHC--CCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEE
Confidence 378999996 99999999999999 999999999876543221 1122 34565542 233 89999
Q ss_pred EEccCCCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHH
Q 024494 147 IFCAPPSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (267)
Q Consensus 147 i~~a~~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~a 213 (267)
||+|+...... ++.++.+++. ...++++||++||.++||.....+++|+.|..| .+.|+.+|.++
T Consensus 83 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~--~~~Y~~sK~~~ 160 (341)
T 3enk_A 83 IHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSA--TNPYGQTKLMA 160 (341)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC--SSHHHHHHHHH
T ss_pred EECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCC--CChhHHHHHHH
Confidence 99999754211 2233444432 234788999999999999887788999998877 46999999999
Q ss_pred HHHHHHc-----C--eeEEeeCccccCC
Q 024494 214 EKVILEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 214 E~~l~~~-----~--~~IlR~~~iyGp~ 234 (267)
|++++.+ + ++++||+++|||+
T Consensus 161 e~~~~~~~~~~~~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 161 EQILRDVEAADPSWRVATLRYFNPVGAH 188 (341)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred HHHHHHHhhcCCCceEEEEeeccccCCc
Confidence 9998764 2 8999999999994
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-21 Score=172.11 Aligned_cols=165 Identities=11% Similarity=0.120 Sum_probs=123.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCCC--
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRS-- 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~~-- 155 (267)
|+|||||+ |+||++|+++|+ + |++|++++|++. .+..|+.|++ .+. ++|+|||+|+....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~--------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~ 69 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-P--VGNLIALDVHSK--------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDK 69 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-T--TSEEEEECTTCS--------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-c--CCeEEEeccccc--------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHhh
Confidence 58999996 999999999999 8 999999999762 2345555542 334 49999999987542
Q ss_pred --CC-------hHHHHHHHHHHh--CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--e
Q 024494 156 --LD-------YPGDVRLAALSW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (267)
Q Consensus 156 --~~-------~~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~ 222 (267)
.+ ++.++.+++.+. .++ +|||+||.++||...+.+++|++|..|. +.|+.+|.++|++++++. +
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~~~~~ 146 (299)
T 1n2s_A 70 AESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPKH 146 (299)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSSE
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCc--cHHHHHHHHHHHHHHHhCCCe
Confidence 12 223345554332 245 8999999999998776789999988774 699999999999999876 9
Q ss_pred eEEeeCccccCCc-----hHHHHH-hCCcceecCCCccccHHHHHHhh
Q 024494 223 CVLRLAGLYISLC-----YLVEKF-QGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 223 ~IlR~~~iyGp~~-----~~l~~~-~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+++||+++|||+. .+++.+ ++.++.+.+ .++.++||.-+++
T Consensus 147 ~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva 193 (299)
T 1n2s_A 147 LIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN-DQYGAPTGAELLA 193 (299)
T ss_dssp EEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC-SCEECCEEHHHHH
T ss_pred EEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec-CcccCCeeHHHHH
Confidence 9999999999973 233444 376665543 3677888865543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=175.19 Aligned_cols=178 Identities=18% Similarity=0.080 Sum_probs=128.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhh----------ccCe---eeecCCc----cccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI----------NMGI---TPSLKWT----EATQKF 143 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~----------~~~v---~~d~~d~----~~~~~~ 143 (267)
.||+|||||+ |+||++|+++|+++ |++|++++|++... ..+. ..++ ..|+.|+ +.+.++
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 103 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 103 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC
Confidence 4689999996 99999999999999 99999999976421 1111 1233 3455554 246799
Q ss_pred CEEEEccCCCCC----CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 144 PYVIFCAPPSRS----LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 144 D~Vi~~a~~~~~----~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
|+|||+|+.... .+ ++.++.+++.+ ..++++|||+||.++|+.....+++|++|..| .+.|+.+|
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~--~~~Y~~sK 181 (352)
T 1sb8_A 104 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKP--LSPYAVTK 181 (352)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCC--CSHHHHHH
T ss_pred CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCC--CChhHHHH
Confidence 999999997532 11 12334444332 34789999999999999876678999998777 46999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCccccCCc-------h----HHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 211 LKAEKVILEF----G--GCVLRLAGLYISLC-------Y----LVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 211 ~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~----~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
.++|++++.+ + ++++||+.+|||+. . ++..+ +|.++.+ +++.+..++||.-+++
T Consensus 182 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 254 (352)
T 1sb8_A 182 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTV 254 (352)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHH
Confidence 9999998654 4 89999999999972 1 33444 4776654 3445677888866554
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-21 Score=173.51 Aligned_cols=147 Identities=18% Similarity=0.169 Sum_probs=110.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCcc----ccC--CCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWTE----ATQ--KFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~~----~~~--~~D~Vi~~a~~~ 153 (267)
||+|||||+ |+||++|+++|+++ |++|++++|+..........++ ..|+.|++ .+. ++|+|||+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~ 78 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDE--GLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS 78 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence 689999996 99999999999999 9999999997654321111123 34555542 344 899999999975
Q ss_pred CCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024494 154 RSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 154 ~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
... + ++.++.+++. ...++++|||+||.++||.....+++|++|..| .+.|+.+|.++|++++.+
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~--~~~Y~~sK~~~e~~~~~~ 156 (330)
T 2c20_A 79 LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNP--TNTYGETKLAIEKMLHWY 156 (330)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCC--SSHHHHHHHHHHHHHHHH
T ss_pred CccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCC--CChHHHHHHHHHHHHHHH
Confidence 421 1 2233444433 234789999999999999876678999998876 469999999999998764
Q ss_pred ----C--eeEEeeCccccCC
Q 024494 221 ----G--GCVLRLAGLYISL 234 (267)
Q Consensus 221 ----~--~~IlR~~~iyGp~ 234 (267)
+ ++++||+.+|||+
T Consensus 157 ~~~~~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 157 SQASNLRYKIFRYFNVAGAT 176 (330)
T ss_dssp HHTSSCEEEEEECSEEECCC
T ss_pred HHHhCCcEEEEecCcccCCC
Confidence 4 8999999999995
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=176.40 Aligned_cols=176 Identities=15% Similarity=0.160 Sum_probs=125.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cC---eeeecCCcc----ccC--CCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG---ITPSLKWTE----ATQ--KFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~---v~~d~~d~~----~~~--~~D~Vi~ 148 (267)
+|+|||||+ |+||++|+++|+++ |++|++++|++.....+.. .+ +..|+.|++ .+. ++|+|||
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhC--CCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 478999996 99999999999999 9999999998765433221 12 234555542 233 4899999
Q ss_pred ccCCCCCC----C-------hHHHHHHHHHH--hCC-CCcEEEEcCCccccCCCC-CccCCCCCCCCCCCCHHHHHHHHH
Q 024494 149 CAPPSRSL----D-------YPGDVRLAALS--WNG-EGSFLFTSSSAIYDCSDN-GACDEDSPVVPIGRSPRTDVLLKA 213 (267)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~l~~~--~~~-v~r~V~~SS~~VYg~~~~-~~~~E~~p~~p~~~~~y~~~k~~a 213 (267)
+|+..... + ++.+..+++.+ ..+ +++|||+||.+|||.... .+++|+++..| .+.|+.+|.++
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~--~~~Y~~sK~~~ 164 (357)
T 1rkx_A 87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG--YDPYSNSKGCA 164 (357)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC--SSHHHHHHHHH
T ss_pred CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCC--CCccHHHHHHH
Confidence 99864211 1 12223344321 124 889999999999987643 46788887766 46899999999
Q ss_pred HHHHHHc-------------C--eeEEeeCccccCCc----h----HHHHH-hCCcceecCCCccccHHHHHHh
Q 024494 214 EKVILEF-------------G--GCVLRLAGLYISLC----Y----LVEKF-QGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 214 E~~l~~~-------------~--~~IlR~~~iyGp~~----~----~l~~~-~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
|++++.+ + ++++||+.+|||+. . +++.+ +|.++.++++.+..++||..++
T Consensus 165 e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dv 238 (357)
T 1rkx_A 165 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEP 238 (357)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHH
T ss_pred HHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHH
Confidence 9988764 5 89999999999973 2 33444 3777766666677788886544
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.6e-20 Score=173.30 Aligned_cols=179 Identities=15% Similarity=0.095 Sum_probs=126.3
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCc----cccCCCCEEEEccCCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.+||+|||||+ |+||++|+++|+++ |++|++++|++.........++ ..|+.|+ +.+.++|+|||+|+..
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~ 104 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADM 104 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHC--CCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceec
Confidence 35789999996 99999999999999 9999999998765433222233 3456654 3567999999999965
Q ss_pred CC-----CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCC-----CccCCCC--CCCCCCCCHHHHHHHH
Q 024494 154 RS-----LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN-----GACDEDS--PVVPIGRSPRTDVLLK 212 (267)
Q Consensus 154 ~~-----~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~-----~~~~E~~--p~~p~~~~~y~~~k~~ 212 (267)
.. .+ ++.+..+++. ...++++|||+||.++|+.... .+++|++ +..| .+.|+.+|.+
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~--~~~Y~~sK~~ 182 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEP--QDAFGLEKLA 182 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCC--SSHHHHHHHH
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCC--CChhHHHHHH
Confidence 32 12 2223444443 2347889999999999986432 3577776 4444 4689999999
Q ss_pred HHHHHHHc----C--eeEEeeCccccCCc-----------hHHHHH-hCCc-cee-cCCCccccHHHHHHhh
Q 024494 213 AEKVILEF----G--GCVLRLAGLYISLC-----------YLVEKF-QGLP-LLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 213 aE~~l~~~----~--~~IlR~~~iyGp~~-----------~~l~~~-~g~~-v~~-~~~~~~~n~IH~~~~~ 264 (267)
+|++++.+ + ++++||+.+|||+. .++..+ ++.+ +.+ +.+.+..++||.-+++
T Consensus 183 ~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 254 (379)
T 2c5a_A 183 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 254 (379)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHH
Confidence 99988654 4 89999999999972 134444 4665 433 3445677888866543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-21 Score=171.78 Aligned_cols=177 Identities=15% Similarity=0.110 Sum_probs=124.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~~ 155 (267)
.+|+|||||+ |+||++|+++|+++ |++|++++|++.. ..+.-.-+..|+.|++ .+. ++|+|||+|+....
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~-~~l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 87 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQ--NVEVFGTSRNNEA-KLPNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSV 87 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCTTC-CCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred CcceEEEECCCChHHHHHHHHHHHC--CCEEEEEecCCcc-ccceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccch
Confidence 4689999996 99999999999999 9999999998765 2221011234565542 333 48999999997542
Q ss_pred ----CC-------hHHHHHHHHHH--h-CCCCcEEEEcCCccccCC--CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 024494 156 ----LD-------YPGDVRLAALS--W-NGEGSFLFTSSSAIYDCS--DNGACDEDSPVVPIGRSPRTDVLLKAEKVILE 219 (267)
Q Consensus 156 ----~~-------~~~~~~~l~~~--~-~~v~r~V~~SS~~VYg~~--~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~ 219 (267)
.+ ++.++.+++.+ . .++++|||+||.++||.. ...+++|++|..| .+.|+.+|.++|++++.
T Consensus 88 ~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~--~~~Y~~sK~~~E~~~~~ 165 (321)
T 2pk3_A 88 KDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRP--MSPYGVSKASVGMLARQ 165 (321)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBC--CSHHHHHHHHHHHHHHH
T ss_pred hhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCC--CCccHHHHHHHHHHHHH
Confidence 12 22334444322 2 258999999999999975 5578999988776 46999999999999877
Q ss_pred c----C--eeEEeeCccccCCc-------hHHHHH-h---C--Cccee-cCCCccccHHHHHHhh
Q 024494 220 F----G--GCVLRLAGLYISLC-------YLVEKF-Q---G--LPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 220 ~----~--~~IlR~~~iyGp~~-------~~l~~~-~---g--~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
+ + ++++||+++|||+. .+++.+ + | .++.+ .++.+..+++|.-+++
T Consensus 166 ~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva 230 (321)
T 2pk3_A 166 YVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIV 230 (321)
T ss_dssp HHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHH
T ss_pred HHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHH
Confidence 5 4 89999999999983 133333 3 5 34433 3444667777765543
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-21 Score=168.80 Aligned_cols=174 Identities=13% Similarity=0.081 Sum_probs=119.2
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCc--hhhhccCeeeecCCc----cccC-----CCCEEEEccCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWT----EATQ-----KFPYVIFCAPP 152 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~--~~l~~~~v~~d~~d~----~~~~-----~~D~Vi~~a~~ 152 (267)
+|||||+ |+||++|+++|+++ | ++|++++|++... ..+....+..|+.|. ..+. ++|+|||+|+.
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~ 78 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGAC 78 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSC
T ss_pred CEEEEcCccHHHHHHHHHHHHC--CCcEEEEEccCCCCchhhhcCcceeccccccHHHHHHHHhccccCCCcEEEECccc
Confidence 5899996 99999999999999 9 9999999986542 222222244555543 2333 59999999997
Q ss_pred CCC--CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-
Q 024494 153 SRS--LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (267)
Q Consensus 153 ~~~--~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~- 220 (267)
... .+ ++.++.+++.+ ..++ +|||+||.++||.....+++|++|..|. +.|+.+|.++|++++.+
T Consensus 79 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~e~~~~~~~ 155 (310)
T 1eq2_A 79 SSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVYGYSKFLFDEYVRQIL 155 (310)
T ss_dssp CCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS--SHHHHHHHHHHHHHHHHG
T ss_pred ccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC--ChhHHHHHHHHHHHHHHH
Confidence 543 12 23344455432 2367 9999999999998766688999887774 68999999999998774
Q ss_pred ---C--eeEEeeCccccCCch-----------HHHHHh-CCccee-cCCCc-cccHHHHHHhh
Q 024494 221 ---G--GCVLRLAGLYISLCY-----------LVEKFQ-GLPLLL-KSPGI-FSANWHYICVK 264 (267)
Q Consensus 221 ---~--~~IlR~~~iyGp~~~-----------~l~~~~-g~~v~~-~~~~~-~~n~IH~~~~~ 264 (267)
+ ++++||+.+|||+.. +++.+. +.++.+ +++.+ +.++||..+++
T Consensus 156 ~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva 218 (310)
T 1eq2_A 156 PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA 218 (310)
T ss_dssp GGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHH
T ss_pred HHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHH
Confidence 2 899999999999732 334443 665543 33446 77888866554
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-21 Score=165.31 Aligned_cols=146 Identities=12% Similarity=0.014 Sum_probs=107.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~~ 155 (267)
||+|||||+ |+||++|+++|+++ |++|++++|++++...+. .+++ .|+.|+ +.++++|+|||+|++...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~ 80 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNR--GFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWN 80 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTT--TCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCC
Confidence 689999996 99999999999999 999999999877654332 2333 455554 356789999999987532
Q ss_pred CC-----hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--e
Q 024494 156 LD-----YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--G 222 (267)
Q Consensus 156 ~~-----~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~--~ 222 (267)
.. +.....+++. ...++++|||+||.++|+...+ ...|+.|..| .+.|+.+|.++|.+++.+ + +
T Consensus 81 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~-~~~~~~~~~p--~~~Y~~sK~~~e~~~~~~~~~~~~~~ 157 (227)
T 3dhn_A 81 NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPG-LRLMDSGEVP--ENILPGVKALGEFYLNFLMKEKEIDW 157 (227)
T ss_dssp ---CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETT-EEGGGTTCSC--GGGHHHHHHHHHHHHHTGGGCCSSEE
T ss_pred ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCC-CccccCCcch--HHHHHHHHHHHHHHHHHHhhccCccE
Confidence 21 4555666553 3357899999999998865443 3344556666 368999999999665543 3 8
Q ss_pred eEEeeCccccCCc
Q 024494 223 CVLRLAGLYISLC 235 (267)
Q Consensus 223 ~IlR~~~iyGp~~ 235 (267)
+++||+.+||++.
T Consensus 158 ~ilrp~~v~g~~~ 170 (227)
T 3dhn_A 158 VFFSPAADMRPGV 170 (227)
T ss_dssp EEEECCSEEESCC
T ss_pred EEEeCCcccCCCc
Confidence 9999999999984
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=170.62 Aligned_cols=178 Identities=12% Similarity=0.083 Sum_probs=124.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhc---cCee---eecCCc----cccCCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELIN---MGIT---PSLKWT----EATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~---~~v~---~d~~d~----~~~~~~D~Vi~~a 150 (267)
||+|||||+ |+||++|+++|+++.+|++|++++|++.. ...+.. .++. .|+.|+ +.+.++|+|||+|
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 689999996 99999999999998556899999997531 122211 2333 355554 3567899999999
Q ss_pred CCCCCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCC------------CccCCCCCCCCCCCCH
Q 024494 151 PPSRSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDN------------GACDEDSPVVPIGRSP 205 (267)
Q Consensus 151 ~~~~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~------------~~~~E~~p~~p~~~~~ 205 (267)
+..... + ++.++.+++.+ ..++ +|||+||.++||.... .+++|++|..| .+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~--~~~ 160 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNP--SSP 160 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCC--CSH
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCC--CCc
Confidence 975421 1 22334444332 2356 9999999999986532 57889888776 369
Q ss_pred HHHHHHHHHHHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 206 y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
|+.+|.++|++++.+ + ++++||+.+|||+. . ++..+ ++.++.+ ..+.+..+++|.-+++
T Consensus 161 Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 234 (348)
T 1oc2_A 161 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHS 234 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHH
Confidence 999999999988764 4 89999999999983 2 33444 4666544 3445677888765543
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.7e-21 Score=170.72 Aligned_cols=172 Identities=12% Similarity=-0.013 Sum_probs=119.8
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~ 154 (267)
.+||+|||||+ |+||++|+++|+++ |+ +.......+ ..+..|+.|++ .++ ++|+|||+|+...
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~--g~------~~~~~~~~~--~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~ 73 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADG--AG------LPGEDWVFV--SSKDADLTDTAQTRALFEKVQPTHVIHLAAMVG 73 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTT--TC------CTTCEEEEC--CTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhc--CC------ccccccccc--CceecccCCHHHHHHHHhhcCCCEEEECceecc
Confidence 45789999996 99999999999999 87 221111111 12345666642 333 4999999999753
Q ss_pred C-----CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCC----CCCCCCCCHHHHHHHHHHHH
Q 024494 155 S-----LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 155 ~-----~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~----p~~p~~~~~y~~~k~~aE~~ 216 (267)
. .+ ++.++.+++. ...++++|||+||.++||.....+++|++ +..|. ..+|+.+|.++|++
T Consensus 74 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~E~~ 152 (319)
T 4b8w_A 74 GLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNS-NFGYSYAKRMIDVQ 152 (319)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSS-SHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCC-cchHHHHHHHHHHH
Confidence 1 11 2334445543 23478999999999999988777899987 44453 12699999999998
Q ss_pred HHHc----C--eeEEeeCccccCCch-----------HHHH----H-hCCcceec-CCCccccHHHHHHhh
Q 024494 217 ILEF----G--GCVLRLAGLYISLCY-----------LVEK----F-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 217 l~~~----~--~~IlR~~~iyGp~~~-----------~l~~----~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
++.+ + ++|+||+++|||+.. ++.. + +|.++.+. .+.++.++||.-+++
T Consensus 153 ~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 223 (319)
T 4b8w_A 153 NRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLA 223 (319)
T ss_dssp HHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHH
T ss_pred HHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHH
Confidence 8763 4 899999999999832 3444 4 47776553 455778888866554
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=171.66 Aligned_cols=175 Identities=13% Similarity=0.075 Sum_probs=124.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCc--hhhhccCeeeecCCcc----ccC-----CCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGITPSLKWTE----ATQ-----KFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~--~~l~~~~v~~d~~d~~----~~~-----~~D~Vi~~a~ 151 (267)
|+|||||+ |+||++|+++|+++ | ++|++++|++... ..+....+..|+.|.+ .++ ++|+|||+|+
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~ 124 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 124 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHT--TCCCEEEEECCSSGGGGGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCcEEEEEecCCCcchhhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECCc
Confidence 78999996 99999999999999 9 9999999976542 2222122445555431 233 6999999999
Q ss_pred CCCC--CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc
Q 024494 152 PSRS--LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF 220 (267)
Q Consensus 152 ~~~~--~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~ 220 (267)
.... .+ ++.++.+++.+ ..++ +|||+||.++||.....+++|+++..|. +.|+.+|.++|++++.+
T Consensus 125 ~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~~E~~~~~~ 201 (357)
T 2x6t_A 125 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPL--NVFGYSKFLFDEYVRQI 201 (357)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCS--SHHHHHHHHHHHHHHHH
T ss_pred ccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCC--ChhHHHHHHHHHHHHHH
Confidence 7543 12 23344555432 2367 9999999999998766689999888774 69999999999998774
Q ss_pred ----C--eeEEeeCccccCCc-------h----HHHHH-hCCcceec-CCCc-cccHHHHHHhh
Q 024494 221 ----G--GCVLRLAGLYISLC-------Y----LVEKF-QGLPLLLK-SPGI-FSANWHYICVK 264 (267)
Q Consensus 221 ----~--~~IlR~~~iyGp~~-------~----~l~~~-~g~~v~~~-~~~~-~~n~IH~~~~~ 264 (267)
+ ++++||+.+|||+. . +++.+ ++.++.+. ++.+ +.++||.-+++
T Consensus 202 ~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 265 (357)
T 2x6t_A 202 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA 265 (357)
T ss_dssp GGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHH
T ss_pred HHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHH
Confidence 2 89999999999973 1 33444 36655433 3346 67788866543
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=169.87 Aligned_cols=178 Identities=17% Similarity=0.047 Sum_probs=124.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--hhh----ccCe---eeecCCcc----ccC--CCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELI----NMGI---TPSLKWTE----ATQ--KFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--~l~----~~~v---~~d~~d~~----~~~--~~D~V 146 (267)
++|+|||||+ |+||++|+++|+++ |++|++++|++.... .+. ..++ ..|+.|++ .+. ++|+|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~V 90 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEV 90 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEE
Confidence 4589999996 99999999999999 999999999865421 111 1122 34555542 233 47999
Q ss_pred EEccCCCCC----CC-------hHHHHHHHHHH--hCCC-CcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHH
Q 024494 147 IFCAPPSRS----LD-------YPGDVRLAALS--WNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 147 i~~a~~~~~----~~-------~~~~~~~l~~~--~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~ 212 (267)
||+|+.... .+ ++.++.+++.+ ..++ ++|||+||.++||.....+++|++|..|. +.|+.+|.+
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~--~~Y~~sK~~ 168 (335)
T 1rpn_A 91 YNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--SPYGVAKLY 168 (335)
T ss_dssp EECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHH
T ss_pred EECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC--ChhHHHHHH
Confidence 999997542 12 12233444332 2365 89999999999998766789999988774 689999999
Q ss_pred HHHHHHHc----C--eeEEeeCccccCCc--h--------HHHHH-hCC-cc-eecCCCccccHHHHHHhh
Q 024494 213 AEKVILEF----G--GCVLRLAGLYISLC--Y--------LVEKF-QGL-PL-LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 213 aE~~l~~~----~--~~IlR~~~iyGp~~--~--------~l~~~-~g~-~v-~~~~~~~~~n~IH~~~~~ 264 (267)
+|++++.+ + ++++||+++|||+. . ++..+ +|. +. ..+++.++.++||.-+++
T Consensus 169 ~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva 239 (335)
T 1rpn_A 169 GHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYV 239 (335)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHH
T ss_pred HHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHH
Confidence 99998764 4 89999999999972 1 22333 354 32 344556788888866554
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-20 Score=168.13 Aligned_cols=178 Identities=17% Similarity=0.168 Sum_probs=125.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhc-CCC---CeEEEEeCCCC--Cchhhhc----cCe---eeecCCc----cccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQE-HPG---CQIYGQTMTAD--HHDELIN----MGI---TPSLKWT----EATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~-~pG---~~V~~l~R~~~--~~~~l~~----~~v---~~d~~d~----~~~~~~D~V 146 (267)
|+|||||+ |+||++|+++|+++ .+| ++|++++|... ....+.. .++ ..|+.|+ +.+.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 58999996 99999999999984 446 99999999642 1122211 133 3455554 245789999
Q ss_pred EEccCCCCCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHH
Q 024494 147 IFCAPPSRSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKA 213 (267)
Q Consensus 147 i~~a~~~~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~a 213 (267)
||+|+..... + ++.++.+++.+ ..++++|||+||.++||...+.+++|+.|..| .+.|+.+|.++
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~--~~~Y~~sK~~~ 158 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEP--NSPYAASKAGS 158 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCC--CSHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCC--CCchHHHHHHH
Confidence 9999975421 1 12334454432 24788999999999999766678899988776 46999999999
Q ss_pred HHHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 214 EKVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 214 E~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
|++++.+ + ++++||+.+|||+. . ++..+ ++.++.+ +++.+..+++|.-+++
T Consensus 159 e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 224 (337)
T 1r6d_A 159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHC 224 (337)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHH
Confidence 9988754 3 89999999999983 2 33444 4666554 3445677888765543
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=173.75 Aligned_cols=178 Identities=13% Similarity=0.101 Sum_probs=117.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCch-hhh-ccCee---eecCCc----cccCCCCEEEEccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHD-ELI-NMGIT---PSLKWT----EATQKFPYVIFCAP 151 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~-~l~-~~~v~---~d~~d~----~~~~~~D~Vi~~a~ 151 (267)
.||+|||||+ |+||++|+++|+++ | ++|++++|++.... .+. ..+++ .|+.|+ +.++++|+|||+|+
T Consensus 31 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 31 ANTNVMVVGGAGFVGSNLVKRLLEL--GVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHc--CCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 4589999996 99999999999999 9 99999999865432 221 12333 355554 35679999999999
Q ss_pred CCCCC----C-------hHHHHHHHHHH--hC-CCCcEEEEcCCccccCCCCCccC--CCC---CC-CCCCCCHHHHHHH
Q 024494 152 PSRSL----D-------YPGDVRLAALS--WN-GEGSFLFTSSSAIYDCSDNGACD--EDS---PV-VPIGRSPRTDVLL 211 (267)
Q Consensus 152 ~~~~~----~-------~~~~~~~l~~~--~~-~v~r~V~~SS~~VYg~~~~~~~~--E~~---p~-~p~~~~~y~~~k~ 211 (267)
..... + ++.+..+++.+ .. ++++|||+||.++||...+.+++ |+. |. .| .+.|+.+|.
T Consensus 109 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~--~~~Y~~sK~ 186 (377)
T 2q1s_A 109 YHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNN--DSPYSMSKI 186 (377)
T ss_dssp CSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCC--CSHHHHHHH
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCC--CCchHHHHH
Confidence 75421 1 12334455432 24 67899999999999987656778 887 55 55 468999999
Q ss_pred HHHHHHHHc----C--eeEEeeCccccCCc----------------h----HHHHH-hCCcceec-CCCccccHHHHHHh
Q 024494 212 KAEKVILEF----G--GCVLRLAGLYISLC----------------Y----LVEKF-QGLPLLLK-SPGIFSANWHYICV 263 (267)
Q Consensus 212 ~aE~~l~~~----~--~~IlR~~~iyGp~~----------------~----~l~~~-~g~~v~~~-~~~~~~n~IH~~~~ 263 (267)
++|++++.+ + ++++||+.+|||+. . +++.+ +|.++.+. ++.++.++||.-++
T Consensus 187 ~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dv 266 (377)
T 2q1s_A 187 FGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVEDV 266 (377)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHHH
Confidence 999998764 3 89999999999965 1 23334 36665443 34577788886654
Q ss_pred h
Q 024494 264 K 264 (267)
Q Consensus 264 ~ 264 (267)
+
T Consensus 267 a 267 (377)
T 2q1s_A 267 A 267 (377)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-21 Score=184.03 Aligned_cols=171 Identities=12% Similarity=0.003 Sum_probs=124.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc--cccCCCCEEEEccCCCCCC----
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT--EATQKFPYVIFCAPPSRSL---- 156 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~--~~~~~~D~Vi~~a~~~~~~---- 156 (267)
||+|||||+ |+||++|+++|+++ |++|++++|++.+.. .+.+|+.+. +.+.++|+|||||+.....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~--G~~V~~l~R~~~~~~-----~v~~d~~~~~~~~l~~~D~Vih~A~~~~~~~~~~ 219 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTG--GHEVIQLVRKEPKPG-----KRFWDPLNPASDLLDGADVLVHLAGEPIFGRFND 219 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSSCCTT-----CEECCTTSCCTTTTTTCSEEEECCCC-----CCG
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCCcc-----ceeecccchhHHhcCCCCEEEECCCCccccccch
Confidence 689999995 99999999999999 999999999876542 244555443 4678999999999975321
Q ss_pred C--------hHHHHHHHHHH---hCCCCcEEEEcCCcccc-CCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH---cC
Q 024494 157 D--------YPGDVRLAALS---WNGEGSFLFTSSSAIYD-CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE---FG 221 (267)
Q Consensus 157 ~--------~~~~~~~l~~~---~~~v~r~V~~SS~~VYg-~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~---~~ 221 (267)
+ ++.++.+++.. ..++++|||+||++||| .....+++|+++. + .+.|++.|.++|+.+.. .+
T Consensus 220 ~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~--~~~y~~~~~~~E~~~~~~~~~g 296 (516)
T 3oh8_A 220 SHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-G--DDFLAEVCRDWEHATAPASDAG 296 (516)
T ss_dssp GGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-C--SSHHHHHHHHHHHTTHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-C--cChHHHHHHHHHHHHHHHHhCC
Confidence 1 33445555433 24789999999999999 5555678998877 4 36899999998876543 34
Q ss_pred --eeEEeeCccccCCchHHHH----Hh-CCcceecCCCccccHHHHHHhh
Q 024494 222 --GCVLRLAGLYISLCYLVEK----FQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 222 --~~IlR~~~iyGp~~~~l~~----~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
++|+||+++|||+..++.. ++ |....++++.++.++||.-+++
T Consensus 297 i~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva 346 (516)
T 3oh8_A 297 KRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLT 346 (516)
T ss_dssp CEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHH
T ss_pred CCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHH
Confidence 8999999999998544333 33 5555555666888999976554
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.85 E-value=8.5e-21 Score=169.93 Aligned_cols=169 Identities=20% Similarity=0.210 Sum_probs=110.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~~ 155 (267)
|+|+|||||+ |+||++|+++|+++ |++|++++|++... . -+..|+.|++ .+. ++|+|||+|+....
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~----~-~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 73 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQN--NWHAVGCGFRRARP----K-FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP 73 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEC-----------------------CHHHHHHHCCSEEEECC-----
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhC--CCeEEEEccCCCCC----C-eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence 3479999996 99999999999999 99999999875441 1 3345555542 233 48999999986432
Q ss_pred C----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024494 156 L----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (267)
Q Consensus 156 ~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~- 221 (267)
. + ++.++.+++.+ ..++ +|||+||.++|+. ...+++|++|..| .+.|+.+|.++|++++.++
T Consensus 74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~-~~~~~~E~~~~~~--~~~Y~~sK~~~e~~~~~~~~ 149 (315)
T 2ydy_A 74 DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDG-TNPPYREEDIPAP--LNLYGKTKLDGEKAVLENNL 149 (315)
T ss_dssp --------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCS-SSCSBCTTSCCCC--CSHHHHHHHHHHHHHHHHCT
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCC-CCCCCCCCCCCCC--cCHHHHHHHHHHHHHHHhCC
Confidence 1 1 23344454432 2354 9999999999987 4567899988777 4699999999999999876
Q ss_pred -eeEEeeCccccCCc--------hHHHHH--hCCcceecCCCccccHHHHHHh
Q 024494 222 -GCVLRLAGLYISLC--------YLVEKF--QGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 222 -~~IlR~~~iyGp~~--------~~l~~~--~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
++++|++.+||++. .+++.+ .+.++.+. +.++.+++|..++
T Consensus 150 ~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dv 201 (315)
T 2ydy_A 150 GAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD-HWQQRFPTHVKDV 201 (315)
T ss_dssp TCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE-CSSBBCCEEHHHH
T ss_pred CeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec-cCceECcEEHHHH
Confidence 89999999999973 244444 35555443 3456677775544
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.9e-20 Score=167.92 Aligned_cols=176 Identities=16% Similarity=0.143 Sum_probs=121.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-hhh----ccCeee---ecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELI----NMGITP---SLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-~l~----~~~v~~---d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
.||+|||||+ |+||++|+++|+++ |++|++++|+..... .+. ..+++. |+.+. .+.++|+|||+|+..
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-LYIEVDQIYHLASPA 102 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-CCCCCSEEEECCSCC
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHC--CCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-hhcCCCEEEECcccc
Confidence 4689999996 99999999999999 999999999754321 111 112333 33333 467899999999975
Q ss_pred CC----CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCC-----CCCCCCCCHHHHHHHHHHH
Q 024494 154 RS----LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDS-----PVVPIGRSPRTDVLLKAEK 215 (267)
Q Consensus 154 ~~----~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~-----p~~p~~~~~y~~~k~~aE~ 215 (267)
.. .+ ++.++.+++.+ ..++ +|||+||.++||.....+++|+. |..| .+.|+.+|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~--~~~Y~~sK~~~E~ 179 (343)
T 2b69_A 103 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP--RACYDEGKRVAET 179 (343)
T ss_dssp SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST--THHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCC--CCchHHHHHHHHH
Confidence 42 11 22334444332 2354 99999999999987666788873 4444 3589999999999
Q ss_pred HHHHc----C--eeEEeeCccccCCc---------hHHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 216 VILEF----G--GCVLRLAGLYISLC---------YLVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 216 ~l~~~----~--~~IlR~~~iyGp~~---------~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
+++.+ + ++++||+.+|||+. .++..+ ++.++.+ +.+.++.++||.-+++
T Consensus 180 ~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva 245 (343)
T 2b69_A 180 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 245 (343)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred HHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHH
Confidence 88653 3 89999999999962 233444 4776644 3445677888866543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=168.44 Aligned_cols=175 Identities=14% Similarity=0.107 Sum_probs=121.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCC--Cchhhhc----cCe---eeecCCcc----ccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTAD--HHDELIN----MGI---TPSLKWTE----ATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~--~~~~l~~----~~v---~~d~~d~~----~~~~~D~Vi~ 148 (267)
|+|||||+ |+||++|+++|+++ | ++|++++|.+. ....+.. .++ ..|+.|++ .+.++|+|||
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~--g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 81 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEK--HPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH 81 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHh--CCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence 78999996 99999999999999 6 89999999642 2222211 123 34565542 4468999999
Q ss_pred ccCCCCCC----C-------hHHHHHHHHHHh--CCC-CcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 149 CAPPSRSL----D-------YPGDVRLAALSW--NGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~l~~~~--~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
+|+..... + ++.+..+++.+. .+. ++|||+||.+|||.....+++|++|..| .+.|+.+|.++|
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~--~~~Y~~sK~~~e 159 (336)
T 2hun_A 82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMP--SSPYSATKAASD 159 (336)
T ss_dssp CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC--CSHHHHHHHHHH
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCC--CCccHHHHHHHH
Confidence 99975321 1 233344443221 243 7999999999999876678899988776 469999999999
Q ss_pred HHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCccee-cCCCccccHHHHHHh
Q 024494 215 KVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 215 ~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
++++.+ + ++++||+.+|||+. . ++..+ ++.++.+ .++.+..+++|.-++
T Consensus 160 ~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 223 (336)
T 2hun_A 160 MLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDH 223 (336)
T ss_dssp HHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHH
T ss_pred HHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHH
Confidence 988764 4 89999999999983 2 33344 4666554 344466777775544
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.5e-21 Score=168.16 Aligned_cols=163 Identities=17% Similarity=0.146 Sum_probs=120.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccC--CCCEEEEccCCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRSL 156 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~--~~D~Vi~~a~~~~~~ 156 (267)
.++|||||+ |+||++|+++|+++ |++|++++|+. .|+.|+ +.+. ++|+|||+|+.....
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~ 77 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGK--NVEVIPTDVQD------------LDITNVLAVNKFFNEKKPNVVINCAAHTAVD 77 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTT------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred cceEEEECCCChHHHHHHHHHHhC--CCeEEeccCcc------------CCCCCHHHHHHHHHhcCCCEEEECCccCCHH
Confidence 389999996 99999999999999 99999999962 233333 2333 799999999975421
Q ss_pred ----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024494 157 ----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (267)
Q Consensus 157 ----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-- 221 (267)
+ ++.++.+++.+ ..++ +|||+||.++|+.....+++|++|..|. +.|+.+|.++|+++++++
T Consensus 78 ~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~E~~~~~~~~~ 154 (292)
T 1vl0_A 78 KCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQ--SAYGKTKLEGENFVKALNPK 154 (292)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSS
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCc--cHHHHHHHHHHHHHHhhCCC
Confidence 1 12233444322 2356 9999999999998766789999988774 689999999999999876
Q ss_pred eeEEeeCccccCCchH----HHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 222 GCVLRLAGLYISLCYL----VEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 222 ~~IlR~~~iyGp~~~~----l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
++++||+.+|||+..+ ++.+. +.++.+.+ .++.+++|.-+++
T Consensus 155 ~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva 201 (292)
T 1vl0_A 155 YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH-DQVGTPTSTVDLA 201 (292)
T ss_dssp EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES-SCEECCEEHHHHH
T ss_pred eEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeec-CeeeCCccHHHHH
Confidence 8999999999996433 33343 66654443 3566777755443
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-21 Score=171.01 Aligned_cols=180 Identities=12% Similarity=0.015 Sum_probs=124.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-CeeeecCCcc----ccC--CCCEEEEccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTE----ATQ--KFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~d~~d~~----~~~--~~D~Vi~~a~~~~ 154 (267)
|+|+|||||+ |+||++|+++|+++.+|++|++++|++......... -+..|+.|++ .+. ++|+|||+|+...
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 80 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALLS 80 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence 3578999996 999999999999863379999999987653211111 2344666542 344 8999999998753
Q ss_pred C---CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCC-CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-
Q 024494 155 S---LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF- 220 (267)
Q Consensus 155 ~---~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~-~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~- 220 (267)
. .+ ++.++.+++.+ ..++++|||+||.++||... ..+.+|+.|..| .+.|+.+|.++|++++.+
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~--~~~Y~~sK~~~e~~~~~~~ 158 (312)
T 2yy7_A 81 ATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEP--STVYGISKQAGERWCEYYH 158 (312)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCC--CSHHHHHHHHHHHHHHHHH
T ss_pred CchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCC--CchhHHHHHHHHHHHHHHH
Confidence 2 11 22334454432 24788999999999998743 357888888777 468999999999988764
Q ss_pred ---C--eeEEeeCccccCC----c----hHH----HHHhCCcce-ecCCCccccHHHHHHhh
Q 024494 221 ---G--GCVLRLAGLYISL----C----YLV----EKFQGLPLL-LKSPGIFSANWHYICVK 264 (267)
Q Consensus 221 ---~--~~IlR~~~iyGp~----~----~~l----~~~~g~~v~-~~~~~~~~n~IH~~~~~ 264 (267)
+ ++++||+++||++ . .+. +.+++.+.. +.++.+..++||.-+++
T Consensus 159 ~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 220 (312)
T 2yy7_A 159 NIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI 220 (312)
T ss_dssp HHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHH
T ss_pred HhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHH
Confidence 4 8999999999964 1 122 334444443 33455778888866543
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=169.40 Aligned_cols=149 Identities=15% Similarity=0.087 Sum_probs=109.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC------c-h---hhh---ccC---eeeecCCcc----ccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH------H-D---ELI---NMG---ITPSLKWTE----ATQ 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~------~-~---~l~---~~~---v~~d~~d~~----~~~ 141 (267)
|+|+|||||+ |+||++|+++|+++ |++|++++|.... . . .+. ..+ +..|+.|++ .+.
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 78 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFK 78 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHH
Confidence 4589999996 99999999999999 9999999986433 1 1 111 112 234565542 333
Q ss_pred --CCCEEEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 142 --KFPYVIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 142 --~~D~Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
++|+|||+|+..... + ++.++.+++. ...++++|||+||.++||.....+++|++|..|. .+.|
T Consensus 79 ~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~-~~~Y 157 (348)
T 1ek6_A 79 KYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGC-TNPY 157 (348)
T ss_dssp HCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SSHH
T ss_pred hcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCC-CCch
Confidence 799999999975321 1 2233444432 2347899999999999998767789999887662 3689
Q ss_pred HHHHHHHHHHHHHc-------CeeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILEF-------GGCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~~~IlR~~~iyGp~ 234 (267)
+.+|.++|++++.+ .++++||+++|||+
T Consensus 158 ~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~ 192 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAH 192 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCC
Confidence 99999999988763 28999999999983
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.7e-20 Score=168.27 Aligned_cols=167 Identities=17% Similarity=0.134 Sum_probs=119.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccC--CCCEEEEccCCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQ--KFPYVIFCAPPSRSL 156 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~--~~D~Vi~~a~~~~~~ 156 (267)
+|+|||||+ |+||++|+++|+++ |++|++++|+.. .|+.|+ +.+. ++|+|||+|+.....
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~--g~~v~~~~r~~~-----------~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 69 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDE-----------LNLLDSRAVHDFFASERIDQVYLAAAKVGGI 69 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTT-----------CCTTCHHHHHHHHHHHCCSEEEECCCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCeEEEEecCcc-----------CCccCHHHHHHHHHhcCCCEEEEcCeecCCc
Confidence 378999996 99999999999999 999999887631 344443 2344 899999999976421
Q ss_pred -----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCC----CCCCCCCCHHHHHHHHHHHHHH
Q 024494 157 -----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDS----PVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 157 -----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~----p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
+ ++.++.+++. ...++++|||+||.++||.....+++|++ +..|. .+.|+.+|.++|++++
T Consensus 70 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~-~~~Y~~sK~~~E~~~~ 148 (321)
T 1e6u_A 70 VANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT-NEPYAIAKIAGIKLCE 148 (321)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGG-GHHHHHHHHHHHHHHH
T ss_pred chhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCC-CCccHHHHHHHHHHHH
Confidence 1 2233444443 23478999999999999987667788887 33332 1489999999999987
Q ss_pred Hc----C--eeEEeeCccccCCc-------h----HHHHHh-----C-Cccee-cCCCccccHHHHHHhh
Q 024494 219 EF----G--GCVLRLAGLYISLC-------Y----LVEKFQ-----G-LPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 219 ~~----~--~~IlR~~~iyGp~~-------~----~l~~~~-----g-~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
++ + ++++||+.+|||+. . ++..+. | .++.+ +.+.+..++||..+++
T Consensus 149 ~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva 218 (321)
T 1e6u_A 149 SYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMA 218 (321)
T ss_dssp HHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHH
T ss_pred HHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHH
Confidence 74 4 89999999999973 2 333331 3 45543 3455778888866553
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.7e-20 Score=166.48 Aligned_cols=178 Identities=17% Similarity=0.169 Sum_probs=123.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe---eeecCCc-----cccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI---TPSLKWT-----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v---~~d~~d~-----~~~~~~D~Vi~~a~~~~ 154 (267)
|+|||||+ |+||++|+++|+++ +|++|++++|++.+...+.. .++ ..|+.|. +.+.++|+|||+|+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~ 79 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT 79 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS-TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence 58999996 99999999999986 27999999998766543321 233 3455552 24468999999998654
Q ss_pred CC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCC---CC--CCCHHHHHHHHHHHH
Q 024494 155 SL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV---PI--GRSPRTDVLLKAEKV 216 (267)
Q Consensus 155 ~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~---p~--~~~~y~~~k~~aE~~ 216 (267)
.. + ++.+..+++. ...+ ++|||+||.++||.....+++|+++.. |. +.+.|+.+|.++|++
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~ 158 (345)
T 2bll_A 80 PIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV 158 (345)
T ss_dssp HHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHH
Confidence 21 1 1223334432 2235 899999999999987666788887542 21 124899999999999
Q ss_pred HHHc----C--eeEEeeCccccCCc---------------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 217 ILEF----G--GCVLRLAGLYISLC---------------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 217 l~~~----~--~~IlR~~~iyGp~~---------------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
++.+ + ++++||+.+|||+. .++..+ +|.++.+. ++.++.++||.-+++
T Consensus 159 ~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 229 (345)
T 2bll_A 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 229 (345)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHH
T ss_pred HHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHH
Confidence 8653 3 89999999999973 123333 47776543 345677888866543
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.1e-20 Score=167.78 Aligned_cols=177 Identities=16% Similarity=0.159 Sum_probs=119.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cc----hhhhccC-e---eeecCCcc----ccCC--CCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HH----DELINMG-I---TPSLKWTE----ATQK--FPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~----~~l~~~~-v---~~d~~d~~----~~~~--~D~Vi 147 (267)
||+|||||+ |+||++|+++|+++ |++|++++|... .. ..+...+ + ..|+.|++ .+.+ +|+||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 78 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCF 78 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhC--CCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEE
Confidence 689999996 99999999999999 999999998532 11 1121111 2 34565542 3445 99999
Q ss_pred EccCCCCCC----C-------hHHHHHHHHHH--hCCCC-cEEEEcCCccccCCCCC----------------ccCCCCC
Q 024494 148 FCAPPSRSL----D-------YPGDVRLAALS--WNGEG-SFLFTSSSAIYDCSDNG----------------ACDEDSP 197 (267)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~~~--~~~v~-r~V~~SS~~VYg~~~~~----------------~~~E~~p 197 (267)
|+|+..... + ++.++.+++.+ ..+++ +|||+||.++||..... +++|+.|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 158 (347)
T 1orr_A 79 HLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQ 158 (347)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSC
T ss_pred ECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCC
Confidence 999975421 1 22334444332 23564 99999999999865332 2667777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc----------hHHHHH-hCC-----ccee-cCCCcc
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC----------YLVEKF-QGL-----PLLL-KSPGIF 254 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~----------~~l~~~-~g~-----~v~~-~~~~~~ 254 (267)
..| .+.|+.+|.++|++++.+ + ++++||+.+|||+. .++..+ ++. ++.+ +++.++
T Consensus 159 ~~~--~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~ 236 (347)
T 1orr_A 159 LDF--HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQV 236 (347)
T ss_dssp CCC--CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCE
T ss_pred CCC--CCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcce
Confidence 665 368999999999998775 4 89999999999972 123333 343 4533 445577
Q ss_pred ccHHHHHHhh
Q 024494 255 SANWHYICVK 264 (267)
Q Consensus 255 ~n~IH~~~~~ 264 (267)
.++||.-+++
T Consensus 237 ~~~i~v~Dva 246 (347)
T 1orr_A 237 RDVLHAEDMI 246 (347)
T ss_dssp EECEEHHHHH
T ss_pred EeeEEHHHHH
Confidence 7888765543
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7e-20 Score=163.87 Aligned_cols=175 Identities=21% Similarity=0.222 Sum_probs=122.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccC---eeeecCCcc----ccC--CCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMG---ITPSLKWTE----ATQ--KFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~---v~~d~~d~~----~~~--~~D~Vi~~a~~~ 153 (267)
|+|||||+ |+||++|+++|+++ |++|++++|.... ...+. .+ +..|+.|++ .+. ++|+|||+|+..
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~ 77 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLAR--GLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQA 77 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcccc
Confidence 58999996 99999999999999 9999999985432 22221 12 234566542 334 799999999875
Q ss_pred CCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCC-ccccC-CCCCccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024494 154 RSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSS-AIYDC-SDNGACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 154 ~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~-~VYg~-~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
... + ++.+..+++. ...++++||++||. .+||. ....+++|+.|..| .+.|+.+|.++|++++
T Consensus 78 ~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~--~~~Y~~sK~~~e~~~~ 155 (311)
T 2p5y_A 78 SVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRP--KSPYAASKAAFEHYLS 155 (311)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCC--CSHHHHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCC--CChHHHHHHHHHHHHH
Confidence 321 1 1223334432 23478999999999 99986 44567889888766 3689999999999886
Q ss_pred Hc----C--eeEEeeCccccCCc----------hHHHHH-hCCccee------cCCCccccHHHHHHhh
Q 024494 219 EF----G--GCVLRLAGLYISLC----------YLVEKF-QGLPLLL------KSPGIFSANWHYICVK 264 (267)
Q Consensus 219 ~~----~--~~IlR~~~iyGp~~----------~~l~~~-~g~~v~~------~~~~~~~n~IH~~~~~ 264 (267)
.+ + ++++||+++|||+. .+++.+ ++.++.+ .++.+..+++|.-+++
T Consensus 156 ~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva 224 (311)
T 2p5y_A 156 VYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVA 224 (311)
T ss_dssp HHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHH
T ss_pred HHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHH
Confidence 53 3 89999999999972 133444 4766543 3344677888865543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=164.10 Aligned_cols=174 Identities=18% Similarity=0.122 Sum_probs=120.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cCe---eeecCCcc----ccC--CCCEEEEcc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGI---TPSLKWTE----ATQ--KFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~v---~~d~~d~~----~~~--~~D~Vi~~a 150 (267)
..|+|||||+ |+||++|+++|+++ |++|++++|+......... .++ ..|+.|++ .+. ++|+|||+|
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A 96 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQ--GHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSA 96 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGG--TCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECC
Confidence 3479999996 99999999999999 9999999997544321111 122 34566542 445 899999999
Q ss_pred CCCCCC---C-----hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCC--ccCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 024494 151 PPSRSL---D-----YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNG--ACDEDSPVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 151 ~~~~~~---~-----~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~--~~~E~~p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
+..... + ++.+..+++.+ ..++++||++||.++|+..... +++|++ .| .+.|+.+|.++|++++
T Consensus 97 ~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~--~~--~~~Y~~sK~~~e~~~~ 172 (330)
T 2pzm_A 97 AAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPT--AP--FTSYGISKTAGEAFLM 172 (330)
T ss_dssp CCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCC--CC--CSHHHHHHHHHHHHHH
T ss_pred ccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCC--CC--CChHHHHHHHHHHHHH
Confidence 975431 1 12233344322 2478999999999999875443 788877 34 3689999999999998
Q ss_pred HcC--eeEEeeCccccCCc--hH----HHHHh-CCcceecCCCccccHHHHHHhh
Q 024494 219 EFG--GCVLRLAGLYISLC--YL----VEKFQ-GLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 219 ~~~--~~IlR~~~iyGp~~--~~----l~~~~-g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
.++ ++++||+++|||+. .+ ++.+. +. ..+.++. ..+++|.-+++
T Consensus 173 ~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva 225 (330)
T 2pzm_A 173 MSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFL 225 (330)
T ss_dssp TCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHH
T ss_pred HcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHH
Confidence 876 89999999999983 23 34443 44 2223333 56677755443
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.1e-19 Score=167.61 Aligned_cols=146 Identities=16% Similarity=0.159 Sum_probs=108.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHH-hcCCCCeEEEEeCCCCC---------chhhhc-----------cC---e---eeecCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWR-QEHPGCQIYGQTMTADH---------HDELIN-----------MG---I---TPSLKW 136 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~-~~~pG~~V~~l~R~~~~---------~~~l~~-----------~~---v---~~d~~d 136 (267)
|+|||||+ |+||++|+++|+ ++ |++|++++|+... ...+.. .+ + ..|+.|
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDT--NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC--CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhC--CCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 69999996 999999999999 99 9999999997544 222210 02 3 345555
Q ss_pred cc----ccC--C-CCEEEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCC-------C
Q 024494 137 TE----ATQ--K-FPYVIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD-------N 189 (267)
Q Consensus 137 ~~----~~~--~-~D~Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~-------~ 189 (267)
++ .+. + +|+|||+|+..... + ++.++.+++. ...++++|||+||.++||... .
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccc
Confidence 42 233 5 99999999976421 1 2233444433 234789999999999998765 5
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 190 ~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
.+++|++|..| .+.|+.+|+++|++++.+ + ++++||+++|||+
T Consensus 161 ~~~~E~~~~~p--~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 161 EPIDINAKKSP--ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH 209 (397)
T ss_dssp CCBCTTSCCBC--SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred cCcCccCCCCC--CCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCC
Confidence 68899988776 469999999999988764 4 8999999999995
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=165.62 Aligned_cols=178 Identities=19% Similarity=0.063 Sum_probs=123.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhh-------ccCe---eeecCCcc----ccC-
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGI---TPSLKWTE----ATQ- 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~-------~~~v---~~d~~d~~----~~~- 141 (267)
|||+|||||+ |+||++|+++|+++ |++|++++|++.. ...+. ..++ ..|+.|++ .+.
T Consensus 23 M~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 100 (375)
T 1t2a_A 23 MRNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE 100 (375)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred cCcEEEEECCCchHHHHHHHHHHHC--CCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHh
Confidence 4578999996 99999999999999 9999999998653 22220 1123 33555542 233
Q ss_pred -CCCEEEEccCCCCCC----C-------hHHHHHHHHHH--hCCC---CcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 142 -KFPYVIFCAPPSRSL----D-------YPGDVRLAALS--WNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 142 -~~D~Vi~~a~~~~~~----~-------~~~~~~~l~~~--~~~v---~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
++|+|||+|+..... + ++.++.+++.+ ..++ ++|||+||.++|+.....+++|++|..| .+
T Consensus 101 ~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~--~~ 178 (375)
T 1t2a_A 101 VKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYP--RS 178 (375)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCC--CS
T ss_pred cCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCC--CC
Confidence 479999999975421 1 12233344332 2355 7999999999999876678999988777 36
Q ss_pred HHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc--h--------HHHHH-hCC-cc-eecCCCccccHHHHHHhh
Q 024494 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC--Y--------LVEKF-QGL-PL-LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~--~--------~l~~~-~g~-~v-~~~~~~~~~n~IH~~~~~ 264 (267)
.|+.+|.++|.+++.+ + ++++|++++|||+. . ++..+ +|. +. .++++.+..++||.-+++
T Consensus 179 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 257 (375)
T 1t2a_A 179 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYV 257 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHH
Confidence 9999999999988764 4 78999999999962 1 22233 354 32 344555778888866543
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=162.32 Aligned_cols=176 Identities=15% Similarity=-0.017 Sum_probs=119.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cCe----eeecCCc----cccCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGI----TPSLKWT----EATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~v----~~d~~d~----~~~~~~D~Vi 147 (267)
+|+|||||+ |+||++|+++|+++ |++|++++|++++...+.. .++ ..|+.|+ +.+.++|+||
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 478999996 99999999999999 9999999998654332211 122 3455554 2456899999
Q ss_pred EccCCCCCC-C-------hHHHHHHHHHHh---CCCCcEEEEcCCccccCCC----CCccCCCCC---------------
Q 024494 148 FCAPPSRSL-D-------YPGDVRLAALSW---NGEGSFLFTSSSAIYDCSD----NGACDEDSP--------------- 197 (267)
Q Consensus 148 ~~a~~~~~~-~-------~~~~~~~l~~~~---~~v~r~V~~SS~~VYg~~~----~~~~~E~~p--------------- 197 (267)
|+|+..... + ++.+..+++.+. .++++|||+||.++|+... +.+++|++.
T Consensus 89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~ 168 (342)
T 1y1p_A 89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESD 168 (342)
T ss_dssp ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTS
T ss_pred EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccc
Confidence 999976432 2 233344554322 3679999999999996432 146788762
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHc------C--eeEEeeCccccCCc----------hHHHHH-hCCcceecCCCccccH
Q 024494 198 -VVPIGRSPRTDVLLKAEKVILEF------G--GCVLRLAGLYISLC----------YLVEKF-QGLPLLLKSPGIFSAN 257 (267)
Q Consensus 198 -~~p~~~~~y~~~k~~aE~~l~~~------~--~~IlR~~~iyGp~~----------~~l~~~-~g~~v~~~~~~~~~n~ 257 (267)
..| .+.|+.+|+++|++++.+ + ++++||+++|||.. .++..+ +|.+..+.++++..++
T Consensus 169 ~~~~--~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1y1p_A 169 PQKS--LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYY 246 (342)
T ss_dssp TTHH--HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEE
T ss_pred cccc--hHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCCE
Confidence 122 358999999999988764 3 78999999999972 123344 4665533222245566
Q ss_pred HHHHHh
Q 024494 258 WHYICV 263 (267)
Q Consensus 258 IH~~~~ 263 (267)
+|.-++
T Consensus 247 v~v~Dv 252 (342)
T 1y1p_A 247 VSAVDI 252 (342)
T ss_dssp EEHHHH
T ss_pred eEHHHH
Confidence 765544
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.7e-19 Score=166.65 Aligned_cols=177 Identities=12% Similarity=0.035 Sum_probs=119.5
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-----------------hh------hccCe---eeecC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-----------------EL------INMGI---TPSLK 135 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-----------------~l------~~~~v---~~d~~ 135 (267)
.|++|||||+ ||||++|+++|+++ |++|++++|...... .+ ...++ ..|+.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC 87 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhC--CCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence 4689999995 99999999999999 999999998532210 11 01123 34555
Q ss_pred Ccc----ccCC--CCEEEEccCCCCC----CC----------hHHHHHHHHHH--hCCC-CcEEEEcCCccccCCCCCcc
Q 024494 136 WTE----ATQK--FPYVIFCAPPSRS----LD----------YPGDVRLAALS--WNGE-GSFLFTSSSAIYDCSDNGAC 192 (267)
Q Consensus 136 d~~----~~~~--~D~Vi~~a~~~~~----~~----------~~~~~~~l~~~--~~~v-~r~V~~SS~~VYg~~~~~~~ 192 (267)
|++ .+.+ +|+|||+|+.... .+ ++.++.+++.+ ..++ ++||++||.++||... .++
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~ 166 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDI 166 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCB
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCC
Confidence 542 3444 9999999986531 11 12233444322 2355 5999999999998764 456
Q ss_pred CCC--------------CCCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc-----------------
Q 024494 193 DED--------------SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC----------------- 235 (267)
Q Consensus 193 ~E~--------------~p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~----------------- 235 (267)
+|+ .+..| .+.|+.+|.++|++++.+ + ++++||+.+|||+.
T Consensus 167 ~E~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~ 244 (404)
T 1i24_A 167 EEGYITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244 (404)
T ss_dssp CSSEEEEEETTEEEEEECCCCC--CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred CccccccccccccccccCCCCC--CChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence 665 34444 468999999999987764 4 89999999999973
Q ss_pred -------hHHHHH-hCCccee-cCCCccccHHHHHHhh
Q 024494 236 -------YLVEKF-QGLPLLL-KSPGIFSANWHYICVK 264 (267)
Q Consensus 236 -------~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~~ 264 (267)
.++..+ +|.++.+ +++.+..++||.-+++
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva 282 (404)
T 1i24_A 245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTV 282 (404)
T ss_dssp TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHH
Confidence 133444 4777644 4455788888866554
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=153.57 Aligned_cols=145 Identities=10% Similarity=0.009 Sum_probs=97.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc--cccCCCCEEEEccCCCCCC--
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT--EATQKFPYVIFCAPPSRSL-- 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~--~~~~~~D~Vi~~a~~~~~~-- 156 (267)
|||||||+ |+||++|+++|+++ |++|++++|++++...+. .+++ .|+.|+ +.+.++|+|||+++.....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNR--GHEVTAIVRNAGKITQTH-KDINILQKDIFDLTLSDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCHHHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhC--CCEEEEEEcCchhhhhcc-CCCeEEeccccChhhhhhcCCCEEEECCcCCccccc
Confidence 68999996 99999999999999 999999999987665443 3333 355554 4678999999999975332
Q ss_pred ChHHHHHHHHHHh--CCCCcEEEEcCCccc-cCCCCCccCCCCCCCCCCCCHHHHHHHHHHHH--HH--HcC--eeEEee
Q 024494 157 DYPGDVRLAALSW--NGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV--IL--EFG--GCVLRL 227 (267)
Q Consensus 157 ~~~~~~~~l~~~~--~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~--l~--~~~--~~IlR~ 227 (267)
.+....++++... .+++++|++||.++| +.....+..|+.+..|. +.|+.+|..+|.+ +. +.+ ++++||
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~--~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp 155 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREA--PYYPTARAQAKQLEHLKSHQAEFSWTYISP 155 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------C--CCSCCHHHHHHHHHHHHTTTTTSCEEEEEC
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCH--HHHHHHHHHHHHHHHHHhhccCccEEEEeC
Confidence 2566677765433 368999999998765 44433456677766664 3566777777765 55 344 999999
Q ss_pred CccccCC
Q 024494 228 AGLYISL 234 (267)
Q Consensus 228 ~~iyGp~ 234 (267)
+.+||++
T Consensus 156 ~~v~g~~ 162 (221)
T 3ew7_A 156 SAMFEPG 162 (221)
T ss_dssp SSCCCCC
T ss_pred cceecCC
Confidence 9999995
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.81 E-value=3e-19 Score=161.69 Aligned_cols=174 Identities=14% Similarity=0.055 Sum_probs=119.5
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-hhhc-cCe---eeecCCcc----ccCC--CCEEEEc
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELIN-MGI---TPSLKWTE----ATQK--FPYVIFC 149 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-~l~~-~~v---~~d~~d~~----~~~~--~D~Vi~~ 149 (267)
..||+|||||+ |+||++|+++|+++ |++|++++|++.... .+.. .++ ..|+.|++ .+.+ +|+|||+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLER--GDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 45689999996 99999999999999 999999999764322 1211 133 34566642 3445 9999999
Q ss_pred cCCCCCC---C-----hHHHHHHHHHH--hCCCCcEEEEcCCcccc----CCCCCccCCCCCCCCCCCCHHHHHHHHHHH
Q 024494 150 APPSRSL---D-----YPGDVRLAALS--WNGEGSFLFTSSSAIYD----CSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (267)
Q Consensus 150 a~~~~~~---~-----~~~~~~~l~~~--~~~v~r~V~~SS~~VYg----~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~ 215 (267)
|+..... + ++.+..+++.+ ..++++||++||.++|| .... +++|++ .|. .+.|+.+|.++|+
T Consensus 97 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--~p~-~~~Y~~sK~~~E~ 172 (333)
T 2q1w_A 97 AASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPV-RLDHPR--NPA-NSSYAISKSANED 172 (333)
T ss_dssp CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSB-CTTSCC--CCT-TCHHHHHHHHHHH
T ss_pred ceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCC-CcCCCC--CCC-CCchHHHHHHHHH
Confidence 9975431 1 12233444322 24788999999999998 5444 788876 342 1689999999999
Q ss_pred HHHH-cC-eeEEeeCccccCCc------hHHHHH-hCCcceecCCCccccHHHHHHh
Q 024494 216 VILE-FG-GCVLRLAGLYISLC------YLVEKF-QGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 216 ~l~~-~~-~~IlR~~~iyGp~~------~~l~~~-~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
+++. +. ++++||+++|||++ .+++.+ ++.++ .. +.+..+++|.-++
T Consensus 173 ~~~~s~~~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~v~Dv 227 (333)
T 2q1w_A 173 YLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKC-FV-TKARRDFVFVKDL 227 (333)
T ss_dssp HHHHHTCCEEEEEESEEESTTCCSSHHHHHHHHHHTTCCC-EE-EECEECEEEHHHH
T ss_pred HHHhhhCCeEEEeeceEECcCCcCcHHHHHHHHHHcCCee-eC-CCceEeeEEHHHH
Confidence 9998 74 99999999999983 233444 35422 22 3456666765544
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=163.01 Aligned_cols=177 Identities=20% Similarity=0.133 Sum_probs=120.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhhhc---------cCe---eeecCCcc----ccC--C
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELIN---------MGI---TPSLKWTE----ATQ--K 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l~~---------~~v---~~d~~d~~----~~~--~ 142 (267)
||+|||||+ |+||++|+++|+++ |++|++++|++... ..+.. .++ ..|+.|++ .+. +
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 78 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ 78 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence 689999996 99999999999999 99999999976431 11111 122 23555542 233 4
Q ss_pred CCEEEEccCCCCCC----Ch-------HHHHHHHHHH--hCCC---CcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 143 FPYVIFCAPPSRSL----DY-------PGDVRLAALS--WNGE---GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~----~~-------~~~~~~l~~~--~~~v---~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
+|+|||+|+..... +. +.++.+++.+ ..++ ++||++||.++||.....+++|++|..| .+.|
T Consensus 79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~--~~~Y 156 (372)
T 1db3_A 79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYP--RSPY 156 (372)
T ss_dssp CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCC--CSHH
T ss_pred CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCC--CChH
Confidence 79999999965321 11 1233444332 2355 7999999999999876668899988877 4699
Q ss_pred HHHHHHHHHHHHHc----C--eeEEeeCccccCCc----------hHHHHH-hCCc-c-eecCCCccccHHHHHHhh
Q 024494 207 TDVLLKAEKVILEF----G--GCVLRLAGLYISLC----------YLVEKF-QGLP-L-LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 207 ~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~----------~~l~~~-~g~~-v-~~~~~~~~~n~IH~~~~~ 264 (267)
+.+|.++|.+++.+ + ++++|+.++|||+. .++..+ +|.+ . ..+++.+..++||.-+++
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva 233 (372)
T 1db3_A 157 AVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYV 233 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHH
Confidence 99999999988764 3 78999999999972 122333 3542 3 344556778888866553
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-19 Score=162.12 Aligned_cols=176 Identities=14% Similarity=0.097 Sum_probs=121.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC--CCchhhhc----cCe---eeecCCcc----ccC--CCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELIN----MGI---TPSLKWTE----ATQ--KFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~--~~~~~l~~----~~v---~~d~~d~~----~~~--~~D~Vi~ 148 (267)
|+|||||+ |+||++|+++|+++ +|++|++++|++ .....+.. .++ ..|+.|++ .+. ++|+|||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKN-TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH 79 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH-CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCchHhHHHHHHHHhc-CCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEE
Confidence 57999996 99999999999987 259999999975 22222221 123 34566542 344 8999999
Q ss_pred ccCCCCCC----C-------hHHHHHHHHHH--hC--CCC-------cEEEEcCCccccCCCC--C--------ccCCCC
Q 024494 149 CAPPSRSL----D-------YPGDVRLAALS--WN--GEG-------SFLFTSSSAIYDCSDN--G--------ACDEDS 196 (267)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~l~~~--~~--~v~-------r~V~~SS~~VYg~~~~--~--------~~~E~~ 196 (267)
+|+..... + ++.++.+++.+ .. +++ +|||+||.+|||.... . +++|++
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 99975421 1 22334444322 22 566 9999999999986531 1 788988
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc---h----HHHHH-hCCccee-cCCCccccHHHHH
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC---Y----LVEKF-QGLPLLL-KSPGIFSANWHYI 261 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~---~----~l~~~-~g~~v~~-~~~~~~~n~IH~~ 261 (267)
|..| .+.|+.+|.++|++++.+ + ++++||+.+|||+. . ++..+ ++.++.+ ..+.+..+++|.-
T Consensus 160 ~~~~--~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 237 (361)
T 1kew_A 160 AYAP--SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVE 237 (361)
T ss_dssp CCCC--CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHH
T ss_pred CCCC--CCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHH
Confidence 8766 469999999999998764 4 89999999999983 2 33444 4666544 3444667777755
Q ss_pred Hh
Q 024494 262 CV 263 (267)
Q Consensus 262 ~~ 263 (267)
++
T Consensus 238 Dv 239 (361)
T 1kew_A 238 DH 239 (361)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.2e-19 Score=157.58 Aligned_cols=147 Identities=14% Similarity=0.040 Sum_probs=109.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccCCCCEEEEccCCCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~~~D~Vi~~a~~~~~~~ 157 (267)
||++|||||+ |+||++|+++|+++ |++|++++|++.+.......-+..|+.|+ +.++++|+|||+|+.....+
T Consensus 1 M~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 78 (267)
T 3ay3_A 1 MLNRLLVTGAAGGVGSAIRPHLGTL--AHEVRLSDIVDLGAAEAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERP 78 (267)
T ss_dssp CEEEEEEESTTSHHHHHHGGGGGGT--EEEEEECCSSCCCCCCTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CCceEEEECCCCHHHHHHHHHHHhC--CCEEEEEeCCCccccCCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCC
Confidence 4578999996 99999999999999 99999999987542110001123455554 35678999999999764333
Q ss_pred h-------HHHHHHHHH--HhCCCCcEEEEcCCccccCCC-CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--
Q 024494 158 Y-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G-- 221 (267)
Q Consensus 158 ~-------~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~-~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~-- 221 (267)
+ ..+..+++. ...++++|||+||..+|+... ..+++|++|..|. +.|+.+|..+|.+++.+ +
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~--~~Y~~sK~~~e~~~~~~~~~~gi~ 156 (267)
T 3ay3_A 79 WNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPD--SLYGLSKCFGEDLASLYYHKFDIE 156 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHcCCC
Confidence 2 233444432 234789999999999998743 4678999988774 68999999999988753 3
Q ss_pred eeEEeeCccccC
Q 024494 222 GCVLRLAGLYIS 233 (267)
Q Consensus 222 ~~IlR~~~iyGp 233 (267)
++++||+.+|+.
T Consensus 157 ~~~lrp~~v~~~ 168 (267)
T 3ay3_A 157 TLNIRIGSCFPK 168 (267)
T ss_dssp EEEEEECBCSSS
T ss_pred EEEEeceeecCC
Confidence 899999999853
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=166.05 Aligned_cols=177 Identities=16% Similarity=0.059 Sum_probs=120.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhhc------c-Ce---eeecCCcc----ccC-
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELIN------M-GI---TPSLKWTE----ATQ- 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~~------~-~v---~~d~~d~~----~~~- 141 (267)
||++|||||+ |+||++|+++|+++ |++|++++|++.. ...+.. . ++ ..|+.|++ .+.
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 104 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV 104 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHC--CCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHh
Confidence 3478999996 99999999999999 9999999998654 222210 0 33 33555542 233
Q ss_pred -CCCEEEEccCCCCCC----C-------hHHHHHHHHHHh--CCC-----CcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 142 -KFPYVIFCAPPSRSL----D-------YPGDVRLAALSW--NGE-----GSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 142 -~~D~Vi~~a~~~~~~----~-------~~~~~~~l~~~~--~~v-----~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
++|+|||+|+..... + ++.++.+++.+. .++ .+|||+||.++||...+ +++|++|..|
T Consensus 105 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~~~-- 181 (381)
T 1n7h_A 105 IKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPFHP-- 181 (381)
T ss_dssp HCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCCCC--
T ss_pred cCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCCCC--
Confidence 479999999975421 1 112233443211 233 39999999999998765 8899988777
Q ss_pred CCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc--h--------HHHHH-hCCcc--eecCCCccccHHHHHHh
Q 024494 203 RSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC--Y--------LVEKF-QGLPL--LLKSPGIFSANWHYICV 263 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~--~--------~l~~~-~g~~v--~~~~~~~~~n~IH~~~~ 263 (267)
.+.|+.+|+++|++++.+ + ++++|+.++|||+. . ++..+ +|.+. ..+++.+..+++|.-++
T Consensus 182 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dv 261 (381)
T 1n7h_A 182 RSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDY 261 (381)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHH
Confidence 468999999999988764 4 68999999999972 1 12233 35432 33445567788886554
Q ss_pred h
Q 024494 264 K 264 (267)
Q Consensus 264 ~ 264 (267)
+
T Consensus 262 a 262 (381)
T 1n7h_A 262 V 262 (381)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=9.1e-19 Score=157.81 Aligned_cols=175 Identities=18% Similarity=0.136 Sum_probs=121.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--hhhcc----Ce---eeecCCcc----ccC--CCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINM----GI---TPSLKWTE----ATQ--KFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--~l~~~----~v---~~d~~d~~----~~~--~~D~Vi~ 148 (267)
|+|||||+ |+||++|+++|+++ |++|++++|+++... .+... ++ ..|+.|++ .+. ++|+|||
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEK--GYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 78999996 99999999999999 999999999876532 12111 23 34555542 233 4799999
Q ss_pred ccCCCCC----CC-------hHHHHHHHHHH--hCCC-CcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 149 CAPPSRS----LD-------YPGDVRLAALS--WNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 149 ~a~~~~~----~~-------~~~~~~~l~~~--~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
+|+.... .+ ++.+..+++.+ ..++ ++||++||.++||...+.+++|+.+..| .+.|+.+|.++|
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~--~~~Y~~sK~~~e 159 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYP--RSPYAVAKLFGH 159 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCC--CSHHHHHHHHHH
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCC--CChhHHHHHHHH
Confidence 9997532 12 12233444322 2365 8999999999999877778899988776 468999999999
Q ss_pred HHHHHc----C--eeEEeeCccccCCc---hH-------HHHH-hCCc-c-eecCCCccccHHHHHHh
Q 024494 215 KVILEF----G--GCVLRLAGLYISLC---YL-------VEKF-QGLP-L-LLKSPGIFSANWHYICV 263 (267)
Q Consensus 215 ~~l~~~----~--~~IlR~~~iyGp~~---~~-------l~~~-~g~~-v-~~~~~~~~~n~IH~~~~ 263 (267)
++++.+ + ++++|+.++|||+. .+ +..+ +|.. . ..+++.+..+++|.-++
T Consensus 160 ~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dv 227 (345)
T 2z1m_A 160 WITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEY 227 (345)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHH
T ss_pred HHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHH
Confidence 988765 3 68999999999972 11 2223 3432 2 33444566677775544
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-19 Score=154.97 Aligned_cols=147 Identities=14% Similarity=0.081 Sum_probs=110.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----cccCCCCEEEEccCCCCCCCh
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EATQKFPYVIFCAPPSRSLDY 158 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~~~~D~Vi~~a~~~~~~~~ 158 (267)
|++|||||+ |+||++|+++|+++ |++|++++|++.+........+..|+.|+ ..++++|+|||+|+.....++
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~ 80 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPM--AEILRLADLSPLDPAGPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPF 80 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGG--EEEEEEEESSCCCCCCTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhc--CCEEEEEecCCccccCCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCH
Confidence 468999996 99999999999999 99999999987654321112234566665 356789999999998654443
Q ss_pred H-------HHHHHHHH--HhCCCCcEEEEcCCccccCC-CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH----cC--e
Q 024494 159 P-------GDVRLAAL--SWNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILE----FG--G 222 (267)
Q Consensus 159 ~-------~~~~~l~~--~~~~v~r~V~~SS~~VYg~~-~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~----~~--~ 222 (267)
. .+..+++. ...++++||++||..+||.. ...+++|+.|..|. +.|+.+|...|.+++. ++ +
T Consensus 81 ~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~--~~Y~~sK~~~e~~~~~~a~~~g~~~ 158 (267)
T 3rft_A 81 EQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPD--GLYGVSKCFGENLARMYFDKFGQET 158 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHhCCeE
Confidence 2 22333332 23478999999999999753 34678898888774 6899999999998764 34 8
Q ss_pred eEEeeCccccCC
Q 024494 223 CVLRLAGLYISL 234 (267)
Q Consensus 223 ~IlR~~~iyGp~ 234 (267)
+++||+.+||+.
T Consensus 159 ~~vr~~~v~~~~ 170 (267)
T 3rft_A 159 ALVRIGSCTPEP 170 (267)
T ss_dssp EEEEECBCSSSC
T ss_pred EEEEeecccCCC
Confidence 899999999974
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=159.23 Aligned_cols=175 Identities=15% Similarity=0.116 Sum_probs=120.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCC-------CeEEEEeCCCCCchhhhccC---eeeecCCcc----cc-CCCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPG-------CQIYGQTMTADHHDELINMG---ITPSLKWTE----AT-QKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG-------~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~----~~-~~~D~V 146 (267)
.+|+|||||+ |+||++|+++|+++ | ++|++++|++.........+ +..|+.|++ .+ .++|+|
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~--g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~v 90 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKD--GSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVI 90 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHH--CEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhc--CCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEE
Confidence 3478999995 99999999999999 9 89999999865432211112 334666652 34 589999
Q ss_pred EEccCCCCC---CC-------hHHHHHHHHHH--hCC-----CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 147 IFCAPPSRS---LD-------YPGDVRLAALS--WNG-----EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 147 i~~a~~~~~---~~-------~~~~~~~l~~~--~~~-----v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
||+|+.... .+ ++.++.+++.+ ..+ +++||++||.++||.....+++|++|..| .+.|+.+
T Consensus 91 ih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~--~~~Y~~s 168 (342)
T 2hrz_A 91 FHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTP--LTSYGTQ 168 (342)
T ss_dssp EECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCC--SSHHHHH
T ss_pred EECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCC--cchHHHH
Confidence 999997531 11 12233344321 123 78999999999999765568999998877 4699999
Q ss_pred HHHHHHHHHHc----C--eeEEeeCcccc-CCc------hH----HHHH-hCCcceecCC-CccccHHHHH
Q 024494 210 LLKAEKVILEF----G--GCVLRLAGLYI-SLC------YL----VEKF-QGLPLLLKSP-GIFSANWHYI 261 (267)
Q Consensus 210 k~~aE~~l~~~----~--~~IlR~~~iyG-p~~------~~----l~~~-~g~~v~~~~~-~~~~n~IH~~ 261 (267)
|.++|++++++ + ++++|++.+|| |+. .+ ++.+ +|.+..++.+ ....+++|.-
T Consensus 169 K~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 239 (342)
T 2hrz_A 169 KAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPR 239 (342)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHH
T ss_pred HHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehH
Confidence 99999998775 2 79999999998 762 22 2333 3666544333 3445555543
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=157.83 Aligned_cols=146 Identities=16% Similarity=0.131 Sum_probs=104.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc----hhhh---ccC---eeeecCCcc----ccC--CCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----DELI---NMG---ITPSLKWTE----ATQ--KFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~----~~l~---~~~---v~~d~~d~~----~~~--~~D~Vi 147 (267)
|+|||||+ |+||++|+++|+++ |++|++++|..... ..+. ... +..|+.|++ .+. ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 58999996 99999999999999 99999998753221 1111 112 234566542 222 599999
Q ss_pred EccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 148 FCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
|+|+..... + ++.++.+++. ...++++||++||.++||.....+++|+.+..|. .+.|+.+|.++|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~-~~~Y~~sK~~~e 157 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTP-QSPYGKSKLMVE 157 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC-SSHHHHHHHHHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCC-CChHHHHHHHHH
Confidence 999865321 1 2233334432 2247899999999999997766788898876542 368999999999
Q ss_pred HHHHHc-----C--eeEEeeCccccC
Q 024494 215 KVILEF-----G--GCVLRLAGLYIS 233 (267)
Q Consensus 215 ~~l~~~-----~--~~IlR~~~iyGp 233 (267)
++++.+ + ++++||+++||+
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~ 183 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGA 183 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECC
T ss_pred HHHHHHHHhcCCCceEEEeeceecCC
Confidence 987653 3 799999999998
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-19 Score=158.47 Aligned_cols=175 Identities=11% Similarity=0.036 Sum_probs=119.7
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCCC---
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRS--- 155 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~~--- 155 (267)
+|||||+ |+||++|+++|+++.+|++|++++|++...... .-+..|+.|++ .+. ++|+|||+|+....
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~--~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~~~ 78 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTGGI--KFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGE 78 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCTTC--CEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccccCc--eEEEecCCCHHHHHHHHhhcCCcEEEECCcccCCccc
Confidence 5899996 999999999998862268999999976543211 12345666642 333 89999999986531
Q ss_pred CC-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCC-CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C
Q 024494 156 LD-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCS-DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G 221 (267)
Q Consensus 156 ~~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~-~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~ 221 (267)
.+ ++.++.+++.+ ..++++|||+||.++|+.. ...+.+|++|..| .+.|+.+|.++|++++.+ +
T Consensus 79 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p--~~~Y~~sK~~~e~~~~~~~~~~~ 156 (317)
T 3ajr_A 79 KDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRP--RTMFGVTKIAAELLGQYYYEKFG 156 (317)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCC--CSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCC--CchHHHHHHHHHHHHHHHHHhcC
Confidence 11 22334444432 3478999999999999874 3356788887776 469999999999987654 4
Q ss_pred --eeEEeeCccccCC--------chH----HHHHhCCcc-eecCCCccccHHHHHHhh
Q 024494 222 --GCVLRLAGLYISL--------CYL----VEKFQGLPL-LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 222 --~~IlR~~~iyGp~--------~~~----l~~~~g~~v-~~~~~~~~~n~IH~~~~~ 264 (267)
++++|++++||++ ..+ .+.+++.+. .+..+.+..++||..+++
T Consensus 157 ~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 214 (317)
T 3ajr_A 157 LDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDAL 214 (317)
T ss_dssp CEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHH
T ss_pred CeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHH
Confidence 8999999999964 112 233444433 333455677888865543
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.79 E-value=8.3e-19 Score=149.32 Aligned_cols=145 Identities=8% Similarity=-0.022 Sum_probs=103.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc--cccCCCCEEEEccCCCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT--EATQKFPYVIFCAPPSRSLD- 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~--~~~~~~D~Vi~~a~~~~~~~- 157 (267)
|||||||+ |+||++|+++|+++ |++|++++|++++...+...+++ .|+.|+ +.+.++|+|||+|+......
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRR--GHEVLAVVRDPQKAADRLGATVATLVKEPLVLTEADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCHHHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHC--CCEEEEEEecccccccccCCCceEEecccccccHhhcccCCEEEECCccCCCcch
Confidence 67999996 99999999999999 99999999997766554333443 355554 45789999999999752211
Q ss_pred ---hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCC---CccCCCCCCCCCCCCHHHHHHHHHHHHH--H-HcC--eeE
Q 024494 158 ---YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDN---GACDEDSPVVPIGRSPRTDVLLKAEKVI--L-EFG--GCV 224 (267)
Q Consensus 158 ---~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~---~~~~E~~p~~p~~~~~y~~~k~~aE~~l--~-~~~--~~I 224 (267)
+....++++.. ..+ ++||++||.+.|..... .+.+|+....| .+.|+.+|..+|.+. . +.+ +++
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~--~~~y~~sK~~~e~~~~~~~~~~i~~~i 155 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS--QPWYDGALYQYYEYQFLQMNANVNWIG 155 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG--STTHHHHHHHHHHHHHHTTCTTSCEEE
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc--chhhHHHHHHHHHHHHHHhcCCCcEEE
Confidence 45556666543 236 99999999866543322 24455444433 357999999999542 2 223 999
Q ss_pred EeeCccccCC
Q 024494 225 LRLAGLYISL 234 (267)
Q Consensus 225 lR~~~iyGp~ 234 (267)
+||+.+||++
T Consensus 156 vrp~~v~g~~ 165 (224)
T 3h2s_A 156 ISPSEAFPSG 165 (224)
T ss_dssp EEECSBCCCC
T ss_pred EcCccccCCC
Confidence 9999999996
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.79 E-value=4.3e-19 Score=151.34 Aligned_cols=142 Identities=11% Similarity=0.048 Sum_probs=106.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCC-c----cccCCCCEEEEccCCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKW-T----EATQKFPYVIFCAPPSRSL- 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d-~----~~~~~~D~Vi~~a~~~~~~- 156 (267)
|+|||||+ |+||++++++|+++ |++|++++|++++...+.. .-+..|+.| + +.++++|+|||+|+.....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTT--DYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTS--SCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 58999996 99999999999999 9999999998766543311 123456777 4 3678999999999976432
Q ss_pred --ChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH-HHcC--eeEEeeCc
Q 024494 157 --DYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI-LEFG--GCVLRLAG 229 (267)
Q Consensus 157 --~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l-~~~~--~~IlR~~~ 229 (267)
.+..+..+++. ...++++||++||.++|+.. +.+| .+..| .+.|+.+|.++|+++ ...+ ++++||+.
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~---~~~e-~~~~~--~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~ 152 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPE---KWIG-AGFDA--LKDYYIAKHFADLYLTKETNLDYTIIQPGA 152 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGG---GCCS-HHHHH--THHHHHHHHHHHHHHHHSCCCEEEEEEECS
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCC---cccc-ccccc--ccHHHHHHHHHHHHHHhccCCcEEEEeCce
Confidence 24445555543 33578999999998887642 3344 33333 358999999999999 5555 99999999
Q ss_pred cccCC
Q 024494 230 LYISL 234 (267)
Q Consensus 230 iyGp~ 234 (267)
+||+.
T Consensus 153 v~g~~ 157 (219)
T 3dqp_A 153 LTEEE 157 (219)
T ss_dssp EECSC
T ss_pred EecCC
Confidence 99985
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.77 E-value=2e-18 Score=164.67 Aligned_cols=153 Identities=12% Similarity=0.078 Sum_probs=111.7
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCC-CCeEEEEeCCCCCchhhh---------------------ccCee---eecC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHP-GCQIYGQTMTADHHDELI---------------------NMGIT---PSLK 135 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~p-G~~V~~l~R~~~~~~~l~---------------------~~~v~---~d~~ 135 (267)
..||+|||||+ |+||++|+++|+++.+ |++|++++|++.....+. ..++. .|+.
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 45789999996 9999999999998844 699999999876431110 01332 3444
Q ss_pred Cc----------cccCCCCEEEEccCCCCCCC-------hHHHHHHHHHHh--CCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 136 WT----------EATQKFPYVIFCAPPSRSLD-------YPGDVRLAALSW--NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 136 d~----------~~~~~~D~Vi~~a~~~~~~~-------~~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
++ ..+.++|+|||+|+...... ++.++.+++... .++++|||+||.+||+.....+++|+.
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~ 230 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDA 230 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSS
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcc
Confidence 22 23458999999999754321 345566665432 468899999999999987667888887
Q ss_pred CCCCCCC---------CHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 197 PVVPIGR---------SPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~---------~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
+..|... +.|+.+|..+|++++++ + ++|+||++|||++
T Consensus 231 ~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~ 283 (478)
T 4dqv_A 231 DIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADT 283 (478)
T ss_dssp CHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCS
T ss_pred cccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCC
Confidence 6544211 34999999999998875 4 8999999999984
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.77 E-value=6e-18 Score=145.82 Aligned_cols=140 Identities=16% Similarity=0.139 Sum_probs=104.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe-ee---ecCC--ccccCCCCEEEEccCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI-TP---SLKW--TEATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v-~~---d~~d--~~~~~~~D~Vi~~a~~~~~ 155 (267)
+.|+|||||+ |+||++|+++|+++ |++|++++|++++...+...++ +. |+.+ .+.+.++|+|||+|+....
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~ 97 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNK--GHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHAFASIDAVVFAAGSGPH 97 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGGGTTCSEEEECCCCCTT
T ss_pred CCCeEEEECCCChHHHHHHHHHHhC--CCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHHHcCCCEEEECCCCCCC
Confidence 4589999996 99999999999999 9999999999887766554455 43 3432 1467899999999997654
Q ss_pred CCh-------HHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeE
Q 024494 156 LDY-------PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (267)
Q Consensus 156 ~~~-------~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~I 224 (267)
.++ +.+..+++. ...++++||++||.+.+.. |..+ .+ ...|+.+|.++|+++++.+ +++
T Consensus 98 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~-------~~~~-~~--~~~Y~~sK~~~e~~~~~~gi~~~~ 167 (236)
T 3e8x_A 98 TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP-------DQGP-MN--MRHYLVAKRLADDELKRSSLDYTI 167 (236)
T ss_dssp SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG-------GGSC-GG--GHHHHHHHHHHHHHHHHSSSEEEE
T ss_pred CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC-------CCCh-hh--hhhHHHHHHHHHHHHHHCCCCEEE
Confidence 332 233444432 2347899999999555432 1122 22 3589999999999999887 999
Q ss_pred EeeCccccCC
Q 024494 225 LRLAGLYISL 234 (267)
Q Consensus 225 lR~~~iyGp~ 234 (267)
+||+.+||+.
T Consensus 168 lrpg~v~~~~ 177 (236)
T 3e8x_A 168 VRPGPLSNEE 177 (236)
T ss_dssp EEECSEECSC
T ss_pred EeCCcccCCC
Confidence 9999999996
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.76 E-value=5.2e-18 Score=149.64 Aligned_cols=161 Identities=16% Similarity=0.094 Sum_probs=116.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+|||||+ |+||++|+++|+++.||++|++++|++++...+...+++ .|+.|+ +.++++|+|||+++... .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~-~ 79 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHY-D 79 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCS-C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCc-C
Confidence 57999996 999999999999864589999999988776554433443 456654 35678999999998642 2
Q ss_pred C--hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCcc
Q 024494 157 D--YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGL 230 (267)
Q Consensus 157 ~--~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~i 230 (267)
+ +.....+++. ...++++|||+||.++|.. | ..|+.+|.++|+++++.+ ++++||+.+
T Consensus 80 ~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~-------------~---~~y~~~K~~~E~~~~~~~~~~~ilrp~~~ 143 (287)
T 2jl1_A 80 NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEES-------------I---IPLAHVHLATEYAIRTTNIPYTFLRNALY 143 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGC-------------C---STHHHHHHHHHHHHHHTTCCEEEEEECCB
T ss_pred chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCC-------------C---CchHHHHHHHHHHHHHcCCCeEEEECCEe
Confidence 2 4455566543 2357899999999998731 1 258999999999998877 999999999
Q ss_pred ccCC-chHH-HHHh-CCcceecCCCccccHHHHHHh
Q 024494 231 YISL-CYLV-EKFQ-GLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 231 yGp~-~~~l-~~~~-g~~v~~~~~~~~~n~IH~~~~ 263 (267)
+|+. ..++ +.++ +.. ..+.+.+..+++|.-++
T Consensus 144 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~Dv 178 (287)
T 2jl1_A 144 TDFFVNEGLRASTESGAI-VTNAGSGIVNSVTRNEL 178 (287)
T ss_dssp HHHHSSGGGHHHHHHTEE-EESCTTCCBCCBCHHHH
T ss_pred ccccchhhHHHHhhCCce-eccCCCCccCccCHHHH
Confidence 9876 4444 3344 443 33444456677775544
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.9e-18 Score=158.49 Aligned_cols=179 Identities=14% Similarity=0.134 Sum_probs=118.8
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch---hh---------------hccCe---eeecCCcc-
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---EL---------------INMGI---TPSLKWTE- 138 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~---~l---------------~~~~v---~~d~~d~~- 138 (267)
..||+|||||+ |+||++|+++|+++ |++|++++|++.... .+ ...++ ..|+.|++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTT--EEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcC--CCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 34579999996 99999999999888 999999999877221 11 01233 33555532
Q ss_pred --ccCCCCEEEEccCCCCCC-C-------hHHHHHHHHHH-hCCCCcEEEEcCCccccC-----CCCCccCCCCCCCCC-
Q 024494 139 --ATQKFPYVIFCAPPSRSL-D-------YPGDVRLAALS-WNGEGSFLFTSSSAIYDC-----SDNGACDEDSPVVPI- 201 (267)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~-~-------~~~~~~~l~~~-~~~v~r~V~~SS~~VYg~-----~~~~~~~E~~p~~p~- 201 (267)
...++|+|||+|+..... + ++.++.+++.. ..++++|||+||.++ |. ....+++|+++..+.
T Consensus 145 l~~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~~~ 223 (427)
T 4f6c_A 145 VVLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQL 223 (427)
T ss_dssp CCCSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSSCC
T ss_pred CCCcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-CCCccCCCCCccccccccccCCC
Confidence 456899999999975421 1 33445555432 227899999999999 54 234578888873321
Q ss_pred CCCHHHHHHHHHHHHHHHc---C--eeEEeeCccccCCc--------------hHHHHH-hCCcceecCCCccccHHHHH
Q 024494 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYISLC--------------YLVEKF-QGLPLLLKSPGIFSANWHYI 261 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp~~--------------~~l~~~-~g~~v~~~~~~~~~n~IH~~ 261 (267)
+.+.|+.+|.++|++++++ + ++++||+++||++. .+++.+ ++.++....+.+..+++|..
T Consensus 224 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 303 (427)
T 4f6c_A 224 LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVD 303 (427)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECCEEHH
T ss_pred CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEEeeHH
Confidence 2579999999999998873 4 89999999999972 122333 34444432234566777755
Q ss_pred Hh
Q 024494 262 CV 263 (267)
Q Consensus 262 ~~ 263 (267)
++
T Consensus 304 Dv 305 (427)
T 4f6c_A 304 TT 305 (427)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-18 Score=163.79 Aligned_cols=180 Identities=13% Similarity=0.117 Sum_probs=120.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh---h---------------hccCe---eeecCCcc--
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE---L---------------INMGI---TPSLKWTE-- 138 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~---l---------------~~~~v---~~d~~d~~-- 138 (267)
.||+|||||+ |+||++|+++|.++ |++|++++|++..... + ...++ ..|+.|++
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGY--SHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV 226 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTT--EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred CCCeEEEECCccchHHHHHHHHHhc--CCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence 4689999996 99999999999888 9999999998773211 0 11233 34555532
Q ss_pred -ccCCCCEEEEccCCCCCC----C----hHHHHHHHHHH-hCCCCcEEEEcCCcc--ccC--CCCCccCCCCCCCCC-CC
Q 024494 139 -ATQKFPYVIFCAPPSRSL----D----YPGDVRLAALS-WNGEGSFLFTSSSAI--YDC--SDNGACDEDSPVVPI-GR 203 (267)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~----~----~~~~~~~l~~~-~~~v~r~V~~SS~~V--Yg~--~~~~~~~E~~p~~p~-~~ 203 (267)
...++|+|||+|+..... . ++.++++++.. ..++++|||+||.++ |.. ....+++|+++..+. +.
T Consensus 227 ~~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~ 306 (508)
T 4f6l_B 227 VLPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 306 (508)
T ss_dssp CCSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCC
T ss_pred CCccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccccccccccCC
Confidence 456899999999975421 1 44556666532 236799999999999 321 234568888773321 24
Q ss_pred CHHHHHHHHHHHHHHHc---C--eeEEeeCccccCCc--h---------HHHH---Hh-CCcceecCCCccccHHHHHHh
Q 024494 204 SPRTDVLLKAEKVILEF---G--GCVLRLAGLYISLC--Y---------LVEK---FQ-GLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp~~--~---------~l~~---~~-g~~v~~~~~~~~~n~IH~~~~ 263 (267)
+.|+++|..+|++++++ + ++|+||+.+||++. + +... +. +..+....+.+..+++|..++
T Consensus 307 ~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~v~v~Dv 386 (508)
T 4f6l_B 307 SPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDFSFVDTT 386 (508)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEECEEHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEEEcHHHH
Confidence 79999999999998874 4 89999999999972 1 2222 32 333333223567788886654
Q ss_pred h
Q 024494 264 K 264 (267)
Q Consensus 264 ~ 264 (267)
+
T Consensus 387 A 387 (508)
T 4f6l_B 387 A 387 (508)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.3e-18 Score=152.33 Aligned_cols=150 Identities=14% Similarity=0.047 Sum_probs=102.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch---hhhc-----cC---eeeecCCc----cccCCCCEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELIN-----MG---ITPSLKWT----EATQKFPYV 146 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~---~l~~-----~~---v~~d~~d~----~~~~~~D~V 146 (267)
++++|||||+ ||||++|+++|+++ ||+|++++|+++... .+.. .+ +..|+.|+ +.+.++|+|
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 81 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLER--GYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV 81 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence 4589999995 99999999999999 999999999876421 1111 01 23456654 356789999
Q ss_pred EEccCCCCC--CC--------hHHHHHHHHHH--hCC-CCcEEEEcCCc-cccCCC-CCccCCCCCCCC-------CCCC
Q 024494 147 IFCAPPSRS--LD--------YPGDVRLAALS--WNG-EGSFLFTSSSA-IYDCSD-NGACDEDSPVVP-------IGRS 204 (267)
Q Consensus 147 i~~a~~~~~--~~--------~~~~~~~l~~~--~~~-v~r~V~~SS~~-VYg~~~-~~~~~E~~p~~p-------~~~~ 204 (267)
||+|++... .+ ++.++.+++.+ ..+ +++|||+||.+ +|+... ..+++|+.+..+ .+.+
T Consensus 82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 161 (337)
T 2c29_D 82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW 161 (337)
T ss_dssp EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTH
T ss_pred EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccc
Confidence 999986432 11 23344555432 234 89999999997 555432 245777753220 0124
Q ss_pred HHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
.|+.+|..+|++++++ + ++++||+++|||+
T Consensus 162 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~ 197 (337)
T 2c29_D 162 MYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPF 197 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCC
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence 7999999999887543 4 8999999999997
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-18 Score=148.77 Aligned_cols=165 Identities=15% Similarity=0.134 Sum_probs=116.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----ccC--CCCEEEEccCCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----ATQ--KFPYVIFCAPPSRSL- 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~~--~~D~Vi~~a~~~~~~- 156 (267)
|+|||||+ |+||++++++|+ + |++|++++|++... .++..|+.|++ .+. ++|+|||+|+.....
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~--g~~V~~~~r~~~~~-----~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 72 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-E--RHEVIKVYNSSEIQ-----GGYKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVDK 72 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-T--TSCEEEEESSSCCT-----TCEECCTTSHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCChhHHHHHHHHh-c--CCeEEEecCCCcCC-----CCceeccCCHHHHHHHHHhcCCCEEEECCcccChhh
Confidence 58999996 999999999998 7 89999999987432 13666777652 333 499999999975421
Q ss_pred ---C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCeeE
Q 024494 157 ---D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFGGCV 224 (267)
Q Consensus 157 ---~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~~~I 224 (267)
+ +..+..+++.+ ..++ +||++||.++|+... .+++|+++..| .+.|+.+|.++|++++...+++
T Consensus 73 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~-~~~~e~~~~~~--~~~Y~~sK~~~e~~~~~~~~~~ 148 (273)
T 2ggs_A 73 CEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEK-GNYKEEDIPNP--INYYGLSKLLGETFALQDDSLI 148 (273)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSS-CSBCTTSCCCC--SSHHHHHHHHHHHHHCCTTCEE
T ss_pred hhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCC-CCcCCCCCCCC--CCHHHHHHHHHHHHHhCCCeEE
Confidence 1 12223344322 2344 999999999998654 37889888776 3689999999999988745899
Q ss_pred EeeCccccCCc---hHHHHH-hCCcceecCCCccccHHHHHHh
Q 024494 225 LRLAGLYISLC---YLVEKF-QGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 225 lR~~~iyGp~~---~~l~~~-~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
+|++.+||+.. .+++.+ ++.++.+.++ ..+++|.-++
T Consensus 149 iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dv 189 (273)
T 2ggs_A 149 IRTSGIFRNKGFPIYVYKTLKEGKTVFAFKG--YYSPISARKL 189 (273)
T ss_dssp EEECCCBSSSSHHHHHHHHHHTTCCEEEESC--EECCCBHHHH
T ss_pred EeccccccccHHHHHHHHHHHcCCCEEeecC--CCCceEHHHH
Confidence 99999999553 333444 3665544333 5566664443
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-18 Score=168.31 Aligned_cols=180 Identities=17% Similarity=0.156 Sum_probs=124.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe---eeecCCcc-----ccCCCCEEEEccCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI---TPSLKWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v---~~d~~d~~-----~~~~~D~Vi~~a~~ 152 (267)
.||+|||||+ |+||++|+++|+++ +|++|++++|++.....+.. .++ ..|+.|++ .+.++|+|||+|+.
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~-~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~ 392 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLRE-DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 392 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHS-SSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhc-CCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence 4578999996 99999999999986 26999999998766543321 233 34555532 34589999999987
Q ss_pred CCCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCC---CC--CCCCHHHHHHHHHH
Q 024494 153 SRSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPV---VP--IGRSPRTDVLLKAE 214 (267)
Q Consensus 153 ~~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~---~p--~~~~~y~~~k~~aE 214 (267)
.... + ++.++.+++.+ ..+ ++|||+||.++||.....+++|+++. .| .+.+.|+.+|.++|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E 471 (660)
T 1z7e_A 393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD 471 (660)
T ss_dssp CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHH
Confidence 5431 1 12234444322 235 89999999999998766778888753 11 11358999999999
Q ss_pred HHHHHc----C--eeEEeeCccccCCc---------------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 215 KVILEF----G--GCVLRLAGLYISLC---------------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 215 ~~l~~~----~--~~IlR~~~iyGp~~---------------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
++++.+ + ++++||+++|||+. .++..+ +|.++.+. ++.+..+++|..+++
T Consensus 472 ~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva 544 (660)
T 1z7e_A 472 RVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGI 544 (660)
T ss_dssp HHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHH
Confidence 998653 4 89999999999973 123344 47766543 345677888865543
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3e-18 Score=157.26 Aligned_cols=149 Identities=16% Similarity=0.209 Sum_probs=110.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCCCCC-----
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLD----- 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~~~~----- 157 (267)
|||||||+ |+||++|+++|+++ |+ +|++++|+.+ .+.+. +.++++|+|||+|+.....+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~--g~~~v~~~d~~~d-~~~l~-----------~~~~~~d~Vih~a~~~~~~~~~~~~ 66 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTST--TDHHIFEVHRQTK-EEELE-----------SALLKADFIVHLAGVNRPEHDKEFS 66 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--CCCEEEECCTTCC-HHHHH-----------HHHHHCSEEEECCCSBCTTCSTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCEEEEECCCCC-HHHHH-----------HHhccCCEEEECCcCCCCCCHHHHH
Confidence 68999996 99999999999999 99 9999999511 11111 13457999999998654321
Q ss_pred --hHHHHHHHHHH--hCCCC-cEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH----cC--eeEEe
Q 024494 158 --YPGDVRLAALS--WNGEG-SFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE----FG--GCVLR 226 (267)
Q Consensus 158 --~~~~~~~l~~~--~~~v~-r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~----~~--~~IlR 226 (267)
+....++++.+ ..+++ +|||+||.++|+ .+.|+.+|.++|+++++ .+ ++|+|
T Consensus 67 ~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~-----------------~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R 129 (369)
T 3st7_A 67 LGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ-----------------DNPYGESKLQGEQLLREYAEEYGNTVYIYR 129 (369)
T ss_dssp SSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS-----------------CSHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC-----------------CCCchHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 34455666543 24666 999999999997 14799999999999887 34 89999
Q ss_pred eCccccCCc---------hHHHHH-hCCcceecCCCccccHHHHHHhh
Q 024494 227 LAGLYISLC---------YLVEKF-QGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 227 ~~~iyGp~~---------~~l~~~-~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
|+++||++. .++..+ .+.++.+.++.+..++||..+++
T Consensus 130 ~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 177 (369)
T 3st7_A 130 WPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIV 177 (369)
T ss_dssp ECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHH
T ss_pred CCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHH
Confidence 999999972 233444 37777666666778888876554
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.7e-17 Score=148.50 Aligned_cols=147 Identities=18% Similarity=0.147 Sum_probs=98.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCC---chhhhcc--------CeeeecCCc----cccCCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADH---HDELINM--------GITPSLKWT----EATQKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~---~~~l~~~--------~v~~d~~d~----~~~~~~D~Vi 147 (267)
++|||||+ ||||++|+++|+++ |++|++++| +++. ...+... -+..|+.|+ +.++++|+||
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLEN--GYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CEEEEECChhHHHHHHHHHHHHC--CCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 68999996 99999999999999 999999998 6532 2111110 123456664 2467899999
Q ss_pred EccCCCCC---C--C-----hHHHHHHHHHHh--C-CCCcEEEEcCCcc-ccCCC-CCccCCCCCCC--------CCCCC
Q 024494 148 FCAPPSRS---L--D-----YPGDVRLAALSW--N-GEGSFLFTSSSAI-YDCSD-NGACDEDSPVV--------PIGRS 204 (267)
Q Consensus 148 ~~a~~~~~---~--~-----~~~~~~~l~~~~--~-~v~r~V~~SS~~V-Yg~~~-~~~~~E~~p~~--------p~~~~ 204 (267)
|+|++... + + ++.++.+++.+. . ++++|||+||.++ |+... ..+++|+.+.. |. ..
T Consensus 80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~-~~ 158 (322)
T 2p4h_X 80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPF-GW 158 (322)
T ss_dssp ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCT-TH
T ss_pred EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcc-cc
Confidence 99975421 1 1 233445554332 3 5789999999885 44322 24577775421 21 11
Q ss_pred HHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
.|+.+|..+|++++++ + ++++||+++|||+
T Consensus 159 ~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~ 194 (322)
T 2p4h_X 159 NYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRF 194 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCC
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCC
Confidence 6999999999987653 3 8999999999997
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.8e-18 Score=156.27 Aligned_cols=150 Identities=18% Similarity=0.081 Sum_probs=101.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch------hhh-ccCe---eeecCCc----cccCCCCEEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD------ELI-NMGI---TPSLKWT----EATQKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~------~l~-~~~v---~~d~~d~----~~~~~~D~Vi 147 (267)
|+|+|||||+ ||||++|+++|+++ ||+|++++|+++... .+. ..++ ..|+.|+ +.+.++|+||
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi 85 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQK--GYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVF 85 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHT--TCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHC--CCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEE
Confidence 3589999995 99999999999999 999999999865422 111 1122 3456554 2567899999
Q ss_pred EccCCCCCC--C--------hHHHHHHHHHH--hCC-CCcEEEEcCCc-cccCCC-C--CccCCCCCCCC-----C--CC
Q 024494 148 FCAPPSRSL--D--------YPGDVRLAALS--WNG-EGSFLFTSSSA-IYDCSD-N--GACDEDSPVVP-----I--GR 203 (267)
Q Consensus 148 ~~a~~~~~~--~--------~~~~~~~l~~~--~~~-v~r~V~~SS~~-VYg~~~-~--~~~~E~~p~~p-----~--~~ 203 (267)
|+|++.... + ++.++.+++.+ ..+ +++|||+||.+ +|+... . .+++|+.+..+ . ..
T Consensus 86 h~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 165 (338)
T 2rh8_A 86 HVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPT 165 (338)
T ss_dssp EESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCC
T ss_pred EeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCcc
Confidence 999864211 1 23445555432 234 89999999987 554321 1 36778763221 1 01
Q ss_pred CHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
..|+.+|..+|++++++ + ++++||+++|||+
T Consensus 166 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~ 202 (338)
T 2rh8_A 166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSS 202 (338)
T ss_dssp CCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCC
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence 25889999999887653 4 8999999999997
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.75 E-value=1.1e-17 Score=166.00 Aligned_cols=148 Identities=16% Similarity=0.116 Sum_probs=107.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch----hh---hccC---eeeecCCcc----ccC--CCCE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----EL---INMG---ITPSLKWTE----ATQ--KFPY 145 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~----~l---~~~~---v~~d~~d~~----~~~--~~D~ 145 (267)
++|+|||||+ |+||++|+++|+++ |++|++++|+..... .+ ...+ +..|+.|++ .+. ++|+
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 3479999996 99999999999999 999999999765321 11 1122 234566542 333 7999
Q ss_pred EEEccCCCCCC----C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCC----CCccCCCCCCCCCCCCHHHH
Q 024494 146 VIFCAPPSRSL----D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSD----NGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 146 Vi~~a~~~~~~----~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~----~~~~~E~~p~~p~~~~~y~~ 208 (267)
|||+|+..... . ++.+..+++. ...++++||++||.++||... ..+++|+.|..| .+.|+.
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p--~~~Y~~ 165 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGP--TNPYGH 165 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCC--CSHHHH
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCC--CChHHH
Confidence 99999975421 1 2233344432 224789999999999998642 246788887776 368999
Q ss_pred HHHHHHHHHHHc------C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~------~--~~IlR~~~iyGp~ 234 (267)
+|.++|++++.+ + ++|+||+.+||++
T Consensus 166 sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~ 199 (699)
T 1z45_A 166 TKYAIENILNDLYNSDKKSWKFAILRYFNPIGAH 199 (699)
T ss_dssp HHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEeccccCCC
Confidence 999999988763 4 8999999999974
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-17 Score=141.15 Aligned_cols=162 Identities=13% Similarity=-0.001 Sum_probs=108.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeeecCCccccCC--CCEEEEccCCCCC--
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKWTEATQK--FPYVIFCAPPSRS-- 155 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~--~D~Vi~~a~~~~~-- 155 (267)
|+|+|||+|+ |+||++++++|+++ |+ +|++++|++.+. ...-.-+..|+.|++.+.. +|+|||+++....
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~--g~~~~V~~~~r~~~~~-~~~~~~~~~D~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALAE-HPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEA 80 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCCC-CTTEECCBSCHHHHGGGCCSCCSEEEECCCCCHHHH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhC--CCCCeEEEEeCCCccc-CCCceEEeccccCHHHHHHhhhcEEEECeeeccccC
Confidence 3479999995 99999999999999 98 999999987651 1000112334444322211 8999999997532
Q ss_pred CC-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---ee
Q 024494 156 LD-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---GC 223 (267)
Q Consensus 156 ~~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~---~~ 223 (267)
.+ +.....+++. ...++++||++||.++|+. + .+.|+.+|.++|+.+++++ ++
T Consensus 81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~-------------~--~~~y~~sK~~~e~~~~~~~~~~~~ 145 (215)
T 2a35_A 81 GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK-------------S--SIFYNRVKGELEQALQEQGWPQLT 145 (215)
T ss_dssp SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------C--SSHHHHHHHHHHHHHTTSCCSEEE
T ss_pred CCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCC-------------C--ccHHHHHHHHHHHHHHHcCCCeEE
Confidence 11 1223334432 2347889999999999863 1 2479999999999999874 89
Q ss_pred EEeeCccccCCc--hHHHHHhCCcceecCCCccccHHHHHHhh
Q 024494 224 VLRLAGLYISLC--YLVEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 224 IlR~~~iyGp~~--~~l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
++||+.+||++. .+++.+.+...... ++ ..+++|.-+++
T Consensus 146 ~vrp~~v~g~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~Dva 186 (215)
T 2a35_A 146 IARPSLLFGPREEFRLAEILAAPIARIL-PG-KYHGIEACDLA 186 (215)
T ss_dssp EEECCSEESTTSCEEGGGGTTCCCC-----C-HHHHHHHHHHH
T ss_pred EEeCceeeCCCCcchHHHHHHHhhhhcc-CC-CcCcEeHHHHH
Confidence 999999999973 34444432222222 22 56788866543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-17 Score=149.61 Aligned_cols=142 Identities=18% Similarity=0.134 Sum_probs=101.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC-----CeEEEEeCCCCCchhhhccCe---eeecCCc----cccCC---CCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-----CQIYGQTMTADHHDELINMGI---TPSLKWT----EATQK---FPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG-----~~V~~l~R~~~~~~~l~~~~v---~~d~~d~----~~~~~---~D~Vi~ 148 (267)
|+|||||+ |+||++|+++|+++ | ++|++++|++.... +...++ ..|+.|+ +.+.+ +|+|||
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~--g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih 78 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLA--DTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFY 78 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTST--TCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence 68999996 99999999999999 9 99999999876542 111223 3456554 24455 999999
Q ss_pred ccCCCCCCC------hHHHHHHHHHHh--C--CCCcEE-------EEcCCccccCC--CCCccCCCCCCCCCCCCHHHHH
Q 024494 149 CAPPSRSLD------YPGDVRLAALSW--N--GEGSFL-------FTSSSAIYDCS--DNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 149 ~a~~~~~~~------~~~~~~~l~~~~--~--~v~r~V-------~~SS~~VYg~~--~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
+|+....+. ++.++.+++.+. . ++++|| |+||.++||.. ...+++|++|..|. .+.|
T Consensus 79 ~a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~-~~~y--- 154 (364)
T 2v6g_A 79 VTWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKY-MNFY--- 154 (364)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSS-CCHH---
T ss_pred CCCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCcc-chhh---
Confidence 999764221 334455554322 2 578997 89999999875 23578898877653 2566
Q ss_pred HHHHHHHHHHc----C---eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF----G---GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~----~---~~IlR~~~iyGp~ 234 (267)
..+|+.++++ + ++|+||+.+|||+
T Consensus 155 -~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~ 185 (364)
T 2v6g_A 155 -YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFS 185 (364)
T ss_dssp -HHHHHHHHHHHTTSTTCEEEEEEESSEECCC
T ss_pred -HHHHHHHHHHhhcCCCceEEEECCCceeCCC
Confidence 3467776653 2 8999999999997
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=7.3e-17 Score=134.93 Aligned_cols=135 Identities=15% Similarity=0.062 Sum_probs=100.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeecCCc----cccCCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSLKWT----EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~~d~----~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+|||+|+ |+||++++++|+++ |++|++++|++++...+...++ ..|+.|+ +.++++|+|||+++.....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence 78999996 99999999999999 9999999998765543222233 3455554 3567899999999865421
Q ss_pred C----hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeC
Q 024494 157 D----YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (267)
Q Consensus 157 ~----~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~ 228 (267)
+ +.....+++. ...++++||++||.++|+..... +. + ...|+.+|.++|+++++.+ ++++||+
T Consensus 82 ~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~------~~-~--~~~y~~~K~~~e~~~~~~~i~~~~lrp~ 152 (206)
T 1hdo_A 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV------PP-R--LQAVTDDHIRMHKVLRESGLKYVAVMPP 152 (206)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS------CG-G--GHHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc------cc-c--chhHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 1 3444555543 23478999999999999864311 11 2 3579999999999998877 9999999
Q ss_pred cc
Q 024494 229 GL 230 (267)
Q Consensus 229 ~i 230 (267)
.+
T Consensus 153 ~~ 154 (206)
T 1hdo_A 153 HI 154 (206)
T ss_dssp EE
T ss_pred cc
Confidence 97
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=2.2e-17 Score=145.27 Aligned_cols=161 Identities=17% Similarity=0.078 Sum_probs=109.7
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCCCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~~~~ 157 (267)
+|||||+ |+||++|+++|+++.+|++|++++|++++...+...++. .|+.|+ +.++++|+|||+++... +.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~-~~ 79 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEV-GQ 79 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCc-hH
Confidence 5899996 999999999999864589999999988776554433443 455554 35788999999998642 22
Q ss_pred hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCccccC
Q 024494 158 YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLYIS 233 (267)
Q Consensus 158 ~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~iyGp 233 (267)
.....++++. ...++++||++||.++|. .| ..|+.+|.++|+++++.+ ++++||+.++++
T Consensus 80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~-------------~~---~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 80 RAPQHRNVINAAKAAGVKFIAYTSLLHADT-------------SP---LGLADEHIETEKMLADSGIVYTLLRNGWYSEN 143 (286)
T ss_dssp --CHHHHHHHHHHHHTCCEEEEEEETTTTT-------------CC---STTHHHHHHHHHHHHHHCSEEEEEEECCBHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCCCCCC-------------Cc---chhHHHHHHHHHHHHHcCCCeEEEeChHHhhh
Confidence 3444555543 234789999999999872 11 258899999999998877 999999877665
Q ss_pred CchHH-HHHhCCcceecCCCccccHHHHHHh
Q 024494 234 LCYLV-EKFQGLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 234 ~~~~l-~~~~g~~v~~~~~~~~~n~IH~~~~ 263 (267)
...++ +.+++..+..+.+.+..+++|.-++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 174 (286)
T 2zcu_A 144 YLASAPAALEHGVFIGAAGDGKIASATRADY 174 (286)
T ss_dssp HHTTHHHHHHHTEEEESCTTCCBCCBCHHHH
T ss_pred hHHHhHHhhcCCceeccCCCCccccccHHHH
Confidence 43333 3344334444444556677775544
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.4e-17 Score=141.55 Aligned_cols=144 Identities=16% Similarity=0.048 Sum_probs=95.0
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhccCe---eeecCCc----cccCCCCEEEEccCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGI---TPSLKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~~v---~~d~~d~----~~~~~~D~Vi~~a~~ 152 (267)
.+||+|||||+ |+||++++++|+++ | ++|++++|++++...+...++ ..|+.|+ +.++++|+|||+++.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~--G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADK--QTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTC--TTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhC--CCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCC
Confidence 35678999995 99999999999999 9 899999999876654433343 3456664 356899999999986
Q ss_pred CCCCChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeC
Q 024494 153 SRSLDYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLA 228 (267)
Q Consensus 153 ~~~~~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~ 228 (267)
.. .....++++. ...++++||++||.++|+.....+..++....+ .+...+..+|+.+.+.+ ++++||+
T Consensus 99 ~~---~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~gi~~~~vrPg 171 (236)
T 3qvo_A 99 ED---LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIG----EPLKPFRRAADAIEASGLEYTILRPA 171 (236)
T ss_dssp TT---HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------C----GGGHHHHHHHHHHHTSCSEEEEEEEC
T ss_pred Cc---hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhccc----chHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 42 2233444432 345789999999999998754332222221111 12234566788888877 9999999
Q ss_pred ccccCC
Q 024494 229 GLYISL 234 (267)
Q Consensus 229 ~iyGp~ 234 (267)
.++++.
T Consensus 172 ~i~~~~ 177 (236)
T 3qvo_A 172 WLTDED 177 (236)
T ss_dssp EEECCS
T ss_pred cccCCC
Confidence 999875
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.71 E-value=8.7e-17 Score=142.22 Aligned_cols=164 Identities=12% Similarity=0.036 Sum_probs=112.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+|||||+ |+||++++++|.++ +|++|++++|++++...+...+++ .|+.|+ +++.++|+|||+++.....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~-~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 79 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIAN-HIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPS 79 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHT-TCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSH
T ss_pred CEEEEEcCCchHHHHHHHHHhhC-CCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccc
Confidence 67999996 99999999998875 389999999998776655444554 355554 3678999999999875432
Q ss_pred -ChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEeeCccc
Q 024494 157 -DYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRLAGLY 231 (267)
Q Consensus 157 -~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~~~iy 231 (267)
......++++. ...++++|||+||. +.. ++.|.. +.......|+.+.+.+ ++++||+.+|
T Consensus 80 ~~~~~~~~~l~~aa~~~gv~~iv~~Ss~---~~~------~~~~~~------~~~~~~~~e~~~~~~g~~~~ilrp~~~~ 144 (289)
T 3e48_A 80 FKRIPEVENLVYAAKQSGVAHIIFIGYY---ADQ------HNNPFH------MSPYFGYASRLLSTSGIDYTYVRMAMYM 144 (289)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEES---CCS------TTCCST------THHHHHHHHHHHHHHCCEEEEEEECEES
T ss_pred hhhHHHHHHHHHHHHHcCCCEEEEEccc---CCC------CCCCCc------cchhHHHHHHHHHHcCCCEEEEeccccc
Confidence 23455555543 33588999999994 321 122221 2233456788888877 9999999999
Q ss_pred cCCchHHHHH-hCCcceecCCCccccHHHHHHhh
Q 024494 232 ISLCYLVEKF-QGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 232 Gp~~~~l~~~-~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
|+...++..+ .+.....+.+.+..++||.-+++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva 178 (289)
T 3e48_A 145 DPLKPYLPELMNMHKLIYPAGDGRINYITRNDIA 178 (289)
T ss_dssp TTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHH
T ss_pred cccHHHHHHHHHCCCEecCCCCceeeeEEHHHHH
Confidence 9875444444 33333344455677777765543
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=9.1e-17 Score=146.88 Aligned_cols=163 Identities=12% Similarity=0.016 Sum_probs=114.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc----cCe---eeecCCc----cccCCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN----MGI---TPSLKWT----EATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~----~~v---~~d~~d~----~~~~~~D~Vi~~a 150 (267)
+|+|||||+ |+||++|+++|+++ +|+ +|++++|++.+...+.. .++ ..|+.|. +++.++|+|||+|
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~-~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A 99 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDT-TNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA 99 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHH-CCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhh-CCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence 478999996 99999999999987 366 99999998665433221 233 3456664 3567999999999
Q ss_pred CCCCCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHH
Q 024494 151 PPSRSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVI 217 (267)
Q Consensus 151 ~~~~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l 217 (267)
+..... + ++.+..+++.+ ..++++||++||..+|. | .+.|+.+|+++|+++
T Consensus 100 a~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~--------------p--~~~Y~~sK~~~E~~~ 163 (344)
T 2gn4_A 100 ALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN--------------P--INLYGATKLCSDKLF 163 (344)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS--------------C--CSHHHHHHHHHHHHH
T ss_pred CCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC--------------C--ccHHHHHHHHHHHHH
Confidence 975421 1 22333444432 24789999999976642 2 258999999999998
Q ss_pred HHc-------C--eeEEeeCccccCCch----HHHHHh-CC-cceecCCCccccHHHHHHh
Q 024494 218 LEF-------G--GCVLRLAGLYISLCY----LVEKFQ-GL-PLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 218 ~~~-------~--~~IlR~~~iyGp~~~----~l~~~~-g~-~v~~~~~~~~~n~IH~~~~ 263 (267)
+.+ + ++++||+++||++.. +.+.++ |. ++.+.++....+++|..++
T Consensus 164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~ 224 (344)
T 2gn4_A 164 VSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEG 224 (344)
T ss_dssp HHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHH
T ss_pred HHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHH
Confidence 763 2 799999999999843 344453 76 6766655566677775544
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=3.2e-17 Score=139.90 Aligned_cols=140 Identities=14% Similarity=-0.015 Sum_probs=102.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHH-hcCCCCeEEEEeCCCC-Cchhh--hccCe---eeecCCc----cccCCCCEEEEcc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWR-QEHPGCQIYGQTMTAD-HHDEL--INMGI---TPSLKWT----EATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~-~~~pG~~V~~l~R~~~-~~~~l--~~~~v---~~d~~d~----~~~~~~D~Vi~~a 150 (267)
||++|||||+ |+||++++++|+ ++ |++|++++|+++ +...+ ...++ ..|+.|+ +.++++|+|||++
T Consensus 4 mmk~vlVtGasg~iG~~~~~~l~~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~a 81 (221)
T 3r6d_A 4 MYXYITILGAAGQIAQXLTATLLTYT--DMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGA 81 (221)
T ss_dssp SCSEEEEESTTSHHHHHHHHHHHHHC--CCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESC
T ss_pred eEEEEEEEeCCcHHHHHHHHHHHhcC--CceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcC
Confidence 3445999996 999999999999 78 999999999977 65544 22233 3456664 3567999999999
Q ss_pred CCCCCCChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC-HHHHHHHHHHHHHHHcC--eeEE
Q 024494 151 PPSRSLDYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS-PRTDVLLKAEKVILEFG--GCVL 225 (267)
Q Consensus 151 ~~~~~~~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~-~y~~~k~~aE~~l~~~~--~~Il 225 (267)
+..+ .+ .++++. ...++++||++||.++|+..+.....+..+ . .. .|+.+|...|+.+++.+ ++++
T Consensus 82 g~~n----~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~--~--~~~~y~~~K~~~e~~~~~~~i~~~~v 152 (221)
T 3r6d_A 82 MESG----SD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFD--N--LPISYVQGERQARNVLRESNLNYTIL 152 (221)
T ss_dssp CCCH----HH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHH--T--SCHHHHHHHHHHHHHHHHSCSEEEEE
T ss_pred CCCC----hh-HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccc--c--cccHHHHHHHHHHHHHHhCCCCEEEE
Confidence 8642 23 444432 335789999999999997543211111111 1 13 79999999999999887 9999
Q ss_pred eeCccccC
Q 024494 226 RLAGLYIS 233 (267)
Q Consensus 226 R~~~iyGp 233 (267)
||+.++++
T Consensus 153 rpg~v~~~ 160 (221)
T 3r6d_A 153 RLTWLYND 160 (221)
T ss_dssp EECEEECC
T ss_pred echhhcCC
Confidence 99999998
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.69 E-value=5.6e-17 Score=144.29 Aligned_cols=166 Identities=15% Similarity=0.074 Sum_probs=113.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCc--hhhhccCee---eecCCc----cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHH--DELINMGIT---PSLKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~--~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~ 152 (267)
+|+|||||+ |+||++++++|+++ | ++|++++|++++. ..+...+++ .|+.|+ .++.++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLED--GTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--CSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhc--CCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence 478999996 99999999999999 8 9999999987764 223233443 456664 357899999999974
Q ss_pred CCCCC---hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEE
Q 024494 153 SRSLD---YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVL 225 (267)
Q Consensus 153 ~~~~~---~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~Il 225 (267)
..... .....++++. ...++++||+.|+.++|+... +. + ...|+.+|.++|+++++.+ ++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~------~~---~--~~~y~~sK~~~e~~~~~~gi~~~il 151 (299)
T 2wm3_A 83 WESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA------GR---L--AAAHFDGKGEVEEYFRDIGVPMTSV 151 (299)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT------TS---C--CCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CccccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC------Cc---c--cCchhhHHHHHHHHHHHCCCCEEEE
Confidence 32111 2334444443 234889999999988887432 11 1 2478999999999999877 9999
Q ss_pred eeCccccCCch-HHHHH-h-CCc--ceecCCCccccHHHHHH
Q 024494 226 RLAGLYISLCY-LVEKF-Q-GLP--LLLKSPGIFSANWHYIC 262 (267)
Q Consensus 226 R~~~iyGp~~~-~l~~~-~-g~~--v~~~~~~~~~n~IH~~~ 262 (267)
||+.+||+... ++... . |.. +..+.+....++||..+
T Consensus 152 rp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~D 193 (299)
T 2wm3_A 152 RLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSD 193 (299)
T ss_dssp ECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGG
T ss_pred eecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHH
Confidence 99999998632 23222 2 422 22333445566666443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.68 E-value=4.3e-16 Score=134.16 Aligned_cols=134 Identities=18% Similarity=0.097 Sum_probs=99.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccC---eeeecCCc----cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMG---ITPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~---v~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
+|+|||||+ |+||++++++|+++ |+ +|++++|++++.......+ +..|+.|+ +.+.++|+|||+|+..
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~--G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~ 95 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 95 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcC--CCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence 378999996 99999999999999 99 9999999877654332222 23455554 3567899999999975
Q ss_pred CCCC--------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024494 154 RSLD--------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (267)
Q Consensus 154 ~~~~--------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-- 221 (267)
.... +.....+++. ...++++||++||.++|+. + ...|+.+|.+.|++++.++
T Consensus 96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~-------------~--~~~Y~~sK~~~e~~~~~~~~~ 160 (242)
T 2bka_A 96 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS-------------S--NFLYLQVKGEVEAKVEELKFD 160 (242)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT-------------C--SSHHHHHHHHHHHHHHTTCCS
T ss_pred cccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC-------------C--cchHHHHHHHHHHHHHhcCCC
Confidence 3211 1122333332 2346889999999999862 1 2479999999999998864
Q ss_pred -eeEEeeCccccCC
Q 024494 222 -GCVLRLAGLYISL 234 (267)
Q Consensus 222 -~~IlR~~~iyGp~ 234 (267)
++++||+.+||+.
T Consensus 161 ~~~~vrpg~v~~~~ 174 (242)
T 2bka_A 161 RYSVFRPGVLLCDR 174 (242)
T ss_dssp EEEEEECCEEECTT
T ss_pred CeEEEcCceecCCC
Confidence 8999999999997
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-16 Score=136.94 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=100.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cCeeeecCCc----cccCCCCEEEEccCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGITPSLKWT----EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~v~~d~~d~----~~~~~~D~Vi~~a~~~~~ 155 (267)
+||+|||||+ |+||++++++|+++.+|++|++++|++++...+.. .-+..|+.|+ +.++++|+|||+|+....
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~ 82 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAFQGIDALVILTSAVPK 82 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCeeEEEecCCCHHHHHHHHcCCCEEEEecccccc
Confidence 4689999996 99999999999998336999999998655443311 1234466664 356789999999985421
Q ss_pred ------------CC------------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 156 ------------LD------------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 156 ------------~~------------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
.+ +.....+++. ...++++||++||.++|.. ..|..+.....|+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~--------~~~~~~~~~~~y~~s 154 (253)
T 1xq6_A 83 MKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNP--------DHPLNKLGNGNILVW 154 (253)
T ss_dssp ECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCT--------TCGGGGGGGCCHHHH
T ss_pred ccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCC--------CCccccccchhHHHH
Confidence 10 1223444432 2247889999999987642 222222111358889
Q ss_pred HHHHHHHHHHcC--eeEEeeCccccCCc
Q 024494 210 LLKAEKVILEFG--GCVLRLAGLYISLC 235 (267)
Q Consensus 210 k~~aE~~l~~~~--~~IlR~~~iyGp~~ 235 (267)
|.++|+++++.+ ++++||+.+||+..
T Consensus 155 K~~~e~~~~~~~i~~~~vrpg~v~~~~~ 182 (253)
T 1xq6_A 155 KRKAEQYLADSGTPYTIIRAGGLLDKEG 182 (253)
T ss_dssp HHHHHHHHHTSSSCEEEEEECEEECSCS
T ss_pred HHHHHHHHHhCCCceEEEecceeecCCc
Confidence 999999998876 99999999999973
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-16 Score=141.98 Aligned_cols=165 Identities=13% Similarity=0.029 Sum_probs=111.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc----h---hhhccCee---eecCCc----cccC--CCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH----D---ELINMGIT---PSLKWT----EATQ--KFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~----~---~l~~~~v~---~d~~d~----~~~~--~~D~V 146 (267)
+|+|||||+ |+||++|+++|+++ |++|++++|++... . .+...+++ .|+.|. +++. ++|+|
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V 87 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDA--HRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV 87 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHT--TCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--CCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence 478999997 99999999999999 99999999987321 1 12223443 455554 2456 99999
Q ss_pred EEccCCCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024494 147 IFCAPPSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (267)
Q Consensus 147 i~~a~~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-- 221 (267)
||+++... .....+++. ...+ +++||+ | +||. ..+|+.+..| ...|+.+|..+|+++++.+
T Consensus 88 i~~a~~~n----~~~~~~l~~aa~~~g~v~~~v~-S---~~g~----~~~e~~~~~p--~~~y~~sK~~~e~~l~~~g~~ 153 (346)
T 3i6i_A 88 VSTVGGES----ILDQIALVKAMKAVGTIKRFLP-S---EFGH----DVNRADPVEP--GLNMYREKRRVRQLVEESGIP 153 (346)
T ss_dssp EECCCGGG----GGGHHHHHHHHHHHCCCSEEEC-S---CCSS----CTTTCCCCTT--HHHHHHHHHHHHHHHHHTTCC
T ss_pred EECCchhh----HHHHHHHHHHHHHcCCceEEee-c---ccCC----CCCccCcCCC--cchHHHHHHHHHHHHHHcCCC
Confidence 99998752 233344432 2246 899986 4 5663 3456666655 3589999999999999987
Q ss_pred eeEEeeCccccCC-chHHHHH----hCCcce-ecCCCccccHHHHHHhh
Q 024494 222 GCVLRLAGLYISL-CYLVEKF----QGLPLL-LKSPGIFSANWHYICVK 264 (267)
Q Consensus 222 ~~IlR~~~iyGp~-~~~l~~~----~g~~v~-~~~~~~~~n~IH~~~~~ 264 (267)
++++||+.+||.. ..+.... .+..+. ++.+.+..++||..+++
T Consensus 154 ~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva 202 (346)
T 3i6i_A 154 FTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIG 202 (346)
T ss_dssp BEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHH
T ss_pred EEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHH
Confidence 9999999999976 2222221 333333 33444667777765543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-15 Score=134.55 Aligned_cols=169 Identities=14% Similarity=-0.002 Sum_probs=108.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chh---hhccCee---eecCCc----cccCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDE---LINMGIT---PSLKWT----EATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~---l~~~~v~---~d~~d~----~~~~~~D~Vi 147 (267)
||+|||+|+ |+||++++++|+++ |++|++++|++.. ... +...+++ .|+.|+ ++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 578999996 99999999999999 9999999998542 111 1223443 355554 3578999999
Q ss_pred EccCCCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--e
Q 024494 148 FCAPPSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--G 222 (267)
Q Consensus 148 ~~a~~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~ 222 (267)
|+++...........++++. ...+ +++||+ | +||.....+ +.+..|. ...| .+|.++|+++++.+ +
T Consensus 82 ~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~~~~---~~~~~p~-~~~y-~sK~~~e~~~~~~g~~~ 152 (313)
T 1qyd_A 82 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDPDIM---EHALQPG-SITF-IDKRKVRRAIEAASIPY 152 (313)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCTTSC---CCCCSST-THHH-HHHHHHHHHHHHTTCCB
T ss_pred ECCccccchhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCcccc---ccCCCCC-cchH-HHHHHHHHHHHhcCCCe
Confidence 99987543222333444432 2356 899986 3 576433221 2233332 2367 99999999999877 9
Q ss_pred eEEeeCccccCCc-hHHHH-----HhCCccee-cCCCccccHHHHHHh
Q 024494 223 CVLRLAGLYISLC-YLVEK-----FQGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 223 ~IlR~~~iyGp~~-~~l~~-----~~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
+++||+.++|+.. .+... ..+..+.+ +.+....+++|.-++
T Consensus 153 ~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dv 200 (313)
T 1qyd_A 153 TYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDV 200 (313)
T ss_dssp CEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHH
T ss_pred EEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHH
Confidence 9999999888531 11111 12233322 233456677775544
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-14 Score=131.99 Aligned_cols=133 Identities=13% Similarity=0.146 Sum_probs=96.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhhhc-cCe---eee-cCCc----cccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELIN-MGI---TPS-LKWT----EATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l~~-~~v---~~d-~~d~----~~~~~~D~Vi~~a~ 151 (267)
+|+|||||+ |+||++|+++|+++ |++|++++|++++. ..+.. .++ ..| +.|+ +++.++|+|||+++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~ 82 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 82 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence 378999996 99999999999999 99999999987764 23322 133 346 6554 35688999999987
Q ss_pred CCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCc--cccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeE
Q 024494 152 PSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSA--IYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (267)
Q Consensus 152 ~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~--VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~I 224 (267)
......+... ++++. ...+ +++|||+||.. .|+. ..+ ..|+.+|.++|+++++.+ ++|
T Consensus 83 ~~~~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----------~~~---~~y~~sK~~~E~~~~~~gi~~~i 147 (352)
T 1xgk_A 83 SQAGDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----------WPA---VPMWAPKFTVENYVRQLGLPSTF 147 (352)
T ss_dssp STTSCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----------CCC---CTTTHHHHHHHHHHHTSSSCEEE
T ss_pred CCCcHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----------CCC---ccHHHHHHHHHHHHHHcCCCEEE
Confidence 5432223333 55543 2347 89999999986 4432 111 357799999999999877 999
Q ss_pred EeeCccccCC
Q 024494 225 LRLAGLYISL 234 (267)
Q Consensus 225 lR~~~iyGp~ 234 (267)
+||+ +||++
T Consensus 148 vrpg-~~g~~ 156 (352)
T 1xgk_A 148 VYAG-IYNNN 156 (352)
T ss_dssp EEEC-EEGGG
T ss_pred Eecc-eecCC
Confidence 9975 78987
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-14 Score=128.21 Aligned_cols=164 Identities=19% Similarity=0.159 Sum_probs=105.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-------CCchh---hhccCee---eecCCc----cccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------DHHDE---LINMGIT---PSLKWT----EATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-------~~~~~---l~~~~v~---~d~~d~----~~~~~~D~ 145 (267)
||+|||+|+ |+||++|+++|+++ |++|++++|++ ++... +...+++ .|+.|+ .+++++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~ 79 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKA--GNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDI 79 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHH--TCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred CcEEEEECCCchHHHHHHHHHHhC--CCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCE
Confidence 688999996 99999999999999 99999999986 22211 1223443 455554 35679999
Q ss_pred EEEccCCCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024494 146 VIFCAPPSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (267)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~- 221 (267)
|||+++... .....+++. ...+ +++||+ | +||... +|+.+..|. ...| .+|..+|+++++.+
T Consensus 80 vi~~a~~~~----~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~-~~~y-~sK~~~e~~~~~~~i 145 (307)
T 2gas_A 80 VICAAGRLL----IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV----DRHDAVEPV-RQVF-EEKASIRRVIEAEGV 145 (307)
T ss_dssp EEECSSSSC----GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTH-HHHH-HHHHHHHHHHHHHTC
T ss_pred EEECCcccc----cccHHHHHHHHHhcCCceEEee-c---ccccCc----ccccCCCcc-hhHH-HHHHHHHHHHHHcCC
Confidence 999998754 122333332 2346 899984 3 566432 233333331 2368 89999999999877
Q ss_pred -eeEEeeCccccCCc-hHHHH---H-hCCccee-cCCCccccHHHHHHh
Q 024494 222 -GCVLRLAGLYISLC-YLVEK---F-QGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 222 -~~IlR~~~iyGp~~-~~l~~---~-~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
++++||+.++++.. .+... . .+..+.+ +.+....+++|.-++
T Consensus 146 ~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 194 (307)
T 2gas_A 146 PYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADV 194 (307)
T ss_dssp CBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHH
T ss_pred CeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHH
Confidence 99999999988652 22221 1 2233332 233456666665443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.54 E-value=2.1e-14 Score=123.96 Aligned_cols=143 Identities=12% Similarity=0.040 Sum_probs=97.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----cc----CCCCEEEEccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----AT----QKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~----~~~D~Vi~~a~~~~ 154 (267)
|++|||||+ |+||++++++|+++ |++|++++|++++... .+..|+.|++ .+ .++|+|||+|+...
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~----~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARA--GHTVIGIDRGQADIEA----DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEeCChhHccc----cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 578999996 99999999999999 9999999998765432 2445554431 22 48999999999765
Q ss_pred -CCChH-------HHHHHHHH------HhCCCCcEEEEcCCccccCCCCC-cc-------CCCCC-------CCCCCCCH
Q 024494 155 -SLDYP-------GDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNG-AC-------DEDSP-------VVPIGRSP 205 (267)
Q Consensus 155 -~~~~~-------~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~-~~-------~E~~p-------~~p~~~~~ 205 (267)
..++. .+..+++. ...+.+++|++||..+|+..... +. +|+.+ ..+ ...
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 152 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQT--HLA 152 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCH--HHH
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCc--chh
Confidence 33221 12222221 12356899999999999754211 11 11110 012 357
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.|.+++.+ + ++++||+.++|+.
T Consensus 153 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~ 190 (255)
T 2dkn_A 153 YAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPL 190 (255)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchh
Confidence 999999999887653 4 8999999999986
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-14 Score=129.43 Aligned_cols=165 Identities=16% Similarity=0.094 Sum_probs=105.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchh---hhccCee---eecCCc----cccCCCCEEEEcc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE---LINMGIT---PSLKWT----EATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~---l~~~~v~---~d~~d~----~~~~~~D~Vi~~a 150 (267)
||++|||+|+ |+||++|+++|+++ |++|++++|++. +... +...+++ .|+.|+ .+++++|+|||++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a 87 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSLKL--GHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISAL 87 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHC--CCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 4468999996 99999999999999 999999999875 3221 2223444 355554 3678999999999
Q ss_pred CCCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEE
Q 024494 151 PPSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVL 225 (267)
Q Consensus 151 ~~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~Il 225 (267)
+..... ..++++. ...+ +++||+ | +||... +|..+..|. ...| .+|.++|+++++.+ ++++
T Consensus 88 ~~~~~~----~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~~~~l 153 (318)
T 2r6j_A 88 AFPQIL----DQFKILEAIKVAGNIKRFLP-S---DFGVEE----DRINALPPF-EALI-ERKRMIRRAIEEANIPYTYV 153 (318)
T ss_dssp CGGGST----THHHHHHHHHHHCCCCEEEC-S---CCSSCT----TTCCCCHHH-HHHH-HHHHHHHHHHHHTTCCBEEE
T ss_pred chhhhH----HHHHHHHHHHhcCCCCEEEe-e---ccccCc----ccccCCCCc-chhH-HHHHHHHHHHHhcCCCeEEE
Confidence 864321 2233332 2246 899985 3 466432 333333331 1357 89999999999877 8999
Q ss_pred eeCccccCC-chHHHHH-hCCccee-cCCCccccHHHHHHh
Q 024494 226 RLAGLYISL-CYLVEKF-QGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 226 R~~~iyGp~-~~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
|++.+++.. ..++... .+..+.+ +.+....+++|..++
T Consensus 154 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 194 (318)
T 2r6j_A 154 SANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDI 194 (318)
T ss_dssp ECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHH
T ss_pred EcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHH
Confidence 998877653 1222221 2333333 334456677775443
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.51 E-value=2.7e-14 Score=126.92 Aligned_cols=164 Identities=16% Similarity=0.078 Sum_probs=104.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc------h---hhhccCee---eecCCc----cccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH------D---ELINMGIT---PSLKWT----EATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~------~---~l~~~~v~---~d~~d~----~~~~~~D~V 146 (267)
||+|+|+|+ |+||++|+++|+++ |++|++++|++... . .+...+++ .|+.|+ ++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhC--CCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEE
Confidence 578999996 99999999999999 99999999985432 1 11223444 355554 356789999
Q ss_pred EEccCCCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024494 147 IFCAPPSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (267)
Q Consensus 147 i~~a~~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-- 221 (267)
||+++.... ...++++. ...+ +++||+ | +||... +|..+..|. ...| .+|.++|+++++.+
T Consensus 82 i~~a~~~~~----~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~~ 147 (308)
T 1qyc_A 82 ISTVGSLQI----ESQVNIIKAIKEVGTVKRFFP-S---EFGNDV----DNVHAVEPA-KSVF-EVKAKVRRAIEAEGIP 147 (308)
T ss_dssp EECCCGGGS----GGGHHHHHHHHHHCCCSEEEC-S---CCSSCT----TSCCCCTTH-HHHH-HHHHHHHHHHHHHTCC
T ss_pred EECCcchhh----hhHHHHHHHHHhcCCCceEee-c---ccccCc----cccccCCcc-hhHH-HHHHHHHHHHHhcCCC
Confidence 999986431 12233322 2246 899984 4 466432 333444342 1367 89999999999876
Q ss_pred eeEEeeCccccCCc-hHHHH---H-hCCccee-cCCCccccHHHHHHh
Q 024494 222 GCVLRLAGLYISLC-YLVEK---F-QGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 222 ~~IlR~~~iyGp~~-~~l~~---~-~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
++++||+.++|+.. .+... . .+..+.+ ..+.+..+++|.-++
T Consensus 148 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 195 (308)
T 1qyc_A 148 YTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDI 195 (308)
T ss_dssp BEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHH
T ss_pred eEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHH
Confidence 99999999988642 12111 1 2233333 233456677775443
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.1e-14 Score=128.67 Aligned_cols=165 Identities=13% Similarity=0.084 Sum_probs=105.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-C-----Cchh---hhccCee---eecCCc----cccCCCCE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-D-----HHDE---LINMGIT---PSLKWT----EATQKFPY 145 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~-----~~~~---l~~~~v~---~d~~d~----~~~~~~D~ 145 (267)
+||+|||+|+ |+||++|+++|+++ |++|++++|++ . +... +...+++ .|+.|+ .+++++|+
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~ 80 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSF--SHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDI 80 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHT--TCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhC--CCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCE
Confidence 4688999996 99999999999999 99999999986 2 1111 1223443 456664 36789999
Q ss_pred EEEccCCCCCCChHHHHHHHHH--HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-
Q 024494 146 VIFCAPPSRSLDYPGDVRLAAL--SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG- 221 (267)
Q Consensus 146 Vi~~a~~~~~~~~~~~~~~l~~--~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~- 221 (267)
|||+++.... ...++++. ...+ +++||+ | +||... +|+.+..|. .+.| .+|..+|+++++.+
T Consensus 81 vi~~a~~~~~----~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~----~~~~~~~p~-~~~y-~sK~~~e~~~~~~~~ 146 (321)
T 3c1o_A 81 VISALPFPMI----SSQIHIINAIKAAGNIKRFLP-S---DFGCEE----DRIKPLPPF-ESVL-EKKRIIRRAIEAAAL 146 (321)
T ss_dssp EEECCCGGGS----GGGHHHHHHHHHHCCCCEEEC-S---CCSSCG----GGCCCCHHH-HHHH-HHHHHHHHHHHHHTC
T ss_pred EEECCCccch----hhHHHHHHHHHHhCCccEEec-c---ccccCc----cccccCCCc-chHH-HHHHHHHHHHHHcCC
Confidence 9999986431 12233332 2346 899983 3 566432 333333331 1368 99999999999877
Q ss_pred -eeEEeeCccccCCc-hHHHH----HhCCcce-ecCCCccccHHHHHHh
Q 024494 222 -GCVLRLAGLYISLC-YLVEK----FQGLPLL-LKSPGIFSANWHYICV 263 (267)
Q Consensus 222 -~~IlR~~~iyGp~~-~~l~~----~~g~~v~-~~~~~~~~n~IH~~~~ 263 (267)
++++||+.++++.. .+... ..+..+. .+.+....+++|.-++
T Consensus 147 ~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 195 (321)
T 3c1o_A 147 PYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDI 195 (321)
T ss_dssp CBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHH
T ss_pred CeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHH
Confidence 99999998888642 22221 1233332 3334456667765544
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.1e-12 Score=107.09 Aligned_cols=127 Identities=16% Similarity=0.113 Sum_probs=88.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-------ccCCCCEEEEccCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-------ATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-------~~~~~D~Vi~~a~~~~~ 155 (267)
+|+|||||+ |+||++++++|+ + |++|++++|+++ .+..|+.|++ ...++|+|||+|+....
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~--g~~V~~~~r~~~--------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~~ 71 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-K--KAEVITAGRHSG--------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSATF 71 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-T--TSEEEEEESSSS--------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-C--CCeEEEEecCcc--------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCCC
Confidence 368999996 999999999999 9 999999999865 2445665542 22468999999996432
Q ss_pred CC--------hH-------HHHHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Q 024494 156 LD--------YP-------GDVRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 156 ~~--------~~-------~~~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~ 216 (267)
.. +. .+..+++.... ..+++|++||...|... .+ ...|+.+|...|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~--~~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 72 SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI-----------VQ--GASAAMANGAVTAF 138 (202)
T ss_dssp CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC-----------TT--CHHHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC-----------Cc--cHHHHHHHHHHHHH
Confidence 21 11 11222222111 12689999998765321 11 24799999999988
Q ss_pred HHHc------C--eeEEeeCccccCC
Q 024494 217 ILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 217 l~~~------~--~~IlR~~~iyGp~ 234 (267)
++.+ + ++++||+.++++.
T Consensus 139 ~~~~~~e~~~gi~v~~v~pg~v~~~~ 164 (202)
T 3d7l_A 139 AKSAAIEMPRGIRINTVSPNVLEESW 164 (202)
T ss_dssp HHHHTTSCSTTCEEEEEEECCBGGGH
T ss_pred HHHHHHHccCCeEEEEEecCccCCch
Confidence 7653 3 7999999999985
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.37 E-value=3.5e-12 Score=109.72 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=93.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cCe---eeecCCcc-------ccCCCCEEEEcc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MGI---TPSLKWTE-------ATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~v---~~d~~d~~-------~~~~~D~Vi~~a 150 (267)
.+++||||+ |+||++++++|+++ |++|++++|+++...++.. .++ ..|+.|++ ...++|+|||+|
T Consensus 7 ~~~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 7 GLRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 378999996 99999999999999 9999999998765433321 122 34555542 234689999999
Q ss_pred CCCCCCC--------h-------HHHHHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 151 PPSRSLD--------Y-------PGDVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 151 ~~~~~~~--------~-------~~~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
+...... + ..+..++. . ...+ .++||++||...|.... + ...|+.
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~--~~~Y~~ 151 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP-----------N--LITYSS 151 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCT-----------T--BHHHHH
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCC-----------C--cchhHH
Confidence 9653211 1 11111111 1 1124 67999999998875321 1 247999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+|.+.|.+++.+ + +.++||+.++++.
T Consensus 152 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 186 (244)
T 1cyd_A 152 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHH
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 999999877643 3 7899999999985
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.3e-12 Score=111.86 Aligned_cols=143 Identities=10% Similarity=-0.007 Sum_probs=91.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-------ccc-CCCCEEEEccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EAT-QKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-------~~~-~~~D~Vi~~a~~~~ 154 (267)
|+++||||+ |.||++++++|+++ |++|++++|++++... .+..|+.|+ +.+ .++|+|||+|+...
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~----~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIA----DLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEEC----CTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhhcc----ccccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 578999996 99999999999999 9999999998765432 144555443 122 56799999999765
Q ss_pred -CCChHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccC-----------------CCCCCCCCCC
Q 024494 155 -SLDYPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACD-----------------EDSPVVPIGR 203 (267)
Q Consensus 155 -~~~~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~-----------------E~~p~~p~~~ 203 (267)
...+.+ +...+. +...+.+++|++||...|......... +..+..+ .
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 152 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGG--N 152 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHH--H
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCC--c
Confidence 333211 111111 123356899999999988321110000 0011111 3
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 192 (257)
T 1fjh_A 153 LAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPL 192 (257)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 47999999998876543 3 7899999999886
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.34 E-value=7e-12 Score=108.25 Aligned_cols=136 Identities=12% Similarity=0.084 Sum_probs=92.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------c---CeeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------M---GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~---~v~~d~~d~~-----------~~~ 141 (267)
++++||||+ |.||++++++|+++ |++|++++|++++...+.. . .+..|+.|++ ...
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLAR--GDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 478999996 99999999999999 9999999998654432210 1 1234565541 124
Q ss_pred CCCEEEEccCCCCCCC-----------hHHH-------H----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD-----------YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-----------~~~~-------~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
++|+|||+|+...... +... . +.++ +...+.+++|++||...|....
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------- 150 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFP--------- 150 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT---------
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC---------
Confidence 8999999998643211 1111 1 1111 1123678999999988764311
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 151 --~--~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 192 (250)
T 2cfc_A 151 --G--RSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPM 192 (250)
T ss_dssp --T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred --C--chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCc
Confidence 1 347999999999876543 3 7999999999997
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.4e-12 Score=109.22 Aligned_cols=137 Identities=12% Similarity=0.060 Sum_probs=93.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cCeeeecCCcc----c------cCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MGITPSLKWTE----A------TQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~v~~d~~d~~----~------~~~~D~V 146 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+.+.+ ..+..|+.|++ . ..++|+|
T Consensus 12 k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAAS--GARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 68999996 99999999999999 9999999998765433221 11234565542 1 2579999
Q ss_pred EEccCCCCCC---C-----hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSL---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~---~-----~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+..... + +.+ + ++.++ +...+.++||++||...|...+ ..| ...
T Consensus 90 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------~~~--~~~ 158 (254)
T 2wsb_A 90 VNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR---------PQF--ASS 158 (254)
T ss_dssp EECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS---------SSC--BHH
T ss_pred EECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC---------CCc--chH
Confidence 9999964321 1 111 1 11111 1123678999999988775321 112 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 159 Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~ 196 (254)
T 2wsb_A 159 YMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEM 196 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchh
Confidence 999999998876543 3 7999999999985
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.5e-12 Score=111.84 Aligned_cols=136 Identities=17% Similarity=0.122 Sum_probs=93.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~ 145 (267)
++++||||+ |+||++++++|+++ |++|++++|+.++..++.. .. +..|+.|++ ...++|+
T Consensus 5 ~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 5 AKVWLVTGASSGFGRAIAEAAVAA--GDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 478999996 99999999999999 9999999998876654422 12 334665541 2348999
Q ss_pred EEEccCCCCCC---C-----hH-------HH----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSL---D-----YP-------GD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~-------~~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+..... + +. .+ ++.++ +...+.+++|++||...+... .+ ..
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~--~~ 149 (281)
T 3m1a_A 83 LVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSF-----------AG--FS 149 (281)
T ss_dssp EEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-----------TT--CH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCC-----------CC--ch
Confidence 99999964211 1 11 11 11121 122367899999998765321 12 35
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (281)
T 3m1a_A 150 AYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNL 188 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccccc
Confidence 8999999999876543 3 7899999987763
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.33 E-value=2e-11 Score=107.15 Aligned_cols=138 Identities=9% Similarity=0.057 Sum_probs=94.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+......-..+..|+.|++ ...++|+|||+|+
T Consensus 28 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg 105 (260)
T 3un1_A 28 QKVVVITGASQGIGAGLVRAYRDR--NYRVVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAG 105 (260)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCC
Confidence 367999996 99999999999999 999999999876554332223445666641 2348999999999
Q ss_pred CCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
...... +.+ +...+. +...+.+++|++||...+.... ..+ ...|+.+|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~---------~~~--~~~Y~~sK 174 (260)
T 3un1_A 106 VFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV---------GMP--SALASLTK 174 (260)
T ss_dssp CCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT---------TCC--CHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC---------CCc--cHHHHHHH
Confidence 654221 111 111111 1234578999999988764321 112 24799999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|.+.+.+ + +.+++|+.++++.
T Consensus 175 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 207 (260)
T 3un1_A 175 GGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM 207 (260)
T ss_dssp HHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTT
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCC
Confidence 9998776543 3 7899999999986
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.31 E-value=1.1e-11 Score=108.11 Aligned_cols=136 Identities=15% Similarity=0.097 Sum_probs=83.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc--C---eeeecCCcc-----------cc-C
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--G---ITPSLKWTE-----------AT-Q 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~--~---v~~d~~d~~-----------~~-~ 141 (267)
.++|||||+ |.||++++++|+++ |++|++++|++++...+. .. . +..|+.|++ .. .
T Consensus 14 ~k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 14 AKTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 378999996 99999999999999 999999999865543321 11 2 234555531 12 6
Q ss_pred CCCEEEEccCCCCCC-----C---h-------HHHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL-----D---Y-------PGDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~---~-------~~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+..... . + ..+..++.. ...+.+++|++||...|.... +
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~ 160 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSAS-----------V 160 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCC-----------C
Confidence 799999999864321 1 1 111112211 223678999999988764211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + ++++||+.++++.
T Consensus 161 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (266)
T 1xq1_A 161 --GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 201 (266)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred --CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccch
Confidence 257999999998876542 3 8899999999986
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=6.9e-12 Score=108.45 Aligned_cols=135 Identities=13% Similarity=0.117 Sum_probs=92.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc--C---eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--G---ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~--~---v~~d~~d~~-----------~~~~~ 143 (267)
++|||||+ |+||++++++|+++ |++|++++|+++....+. .. . +..|+.|++ ...++
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCccHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 78999996 99999999999999 999999999865443221 11 1 234565542 12489
Q ss_pred CEEEEccCCCCCC--C-----hH-------HHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL--D-----YP-------GDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 144 D~Vi~~a~~~~~~--~-----~~-------~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
|+|||+|+..... + +. .+..++.. ...+.++||++||...|.... + .
T Consensus 90 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~--~ 156 (255)
T 1fmc_A 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNI-----------N--M 156 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------T--C
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCC-----------C--C
Confidence 9999999865321 1 11 11111111 123678999999988875321 2 3
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 157 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~ 196 (255)
T 1fmc_A 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDA 196 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred cccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchh
Confidence 57999999999876553 3 7899999999875
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.30 E-value=2e-11 Score=107.00 Aligned_cols=137 Identities=16% Similarity=0.159 Sum_probs=93.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c----C---eeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M----G---ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~----~---v~~d~~d~~-----------~~~~~ 143 (267)
.++|||||+ |.||++++++|+++ |++|++++|+.+....+.. . . +..|+.|++ ...++
T Consensus 16 ~k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 16 DKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999996 99999999999999 9999999998654332211 0 2 234555542 12479
Q ss_pred CEEEEccCCCCC-----CC-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-----LD-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~-----~~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
|+|||+|+.... .+ +.+ +..++. . ...+.+++|++||...|.... .+
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~----------~~ 163 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE----------GV 163 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------TS
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCC----------CC
Confidence 999999986421 01 111 111111 1 113568999999999886421 01
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 164 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 204 (278)
T 2bgk_A 164 --SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 204 (278)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred --CcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchh
Confidence 247999999999876543 4 7899999999986
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=3.2e-11 Score=103.85 Aligned_cols=135 Identities=14% Similarity=0.104 Sum_probs=92.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cC---eeeecCCcc-------ccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MG---ITPSLKWTE-------ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~---v~~d~~d~~-------~~~~~D~Vi~~a~ 151 (267)
++|||||+ |+||++++++|+++ |++|++++|++++.+.+.. .+ +..|+.|++ ...++|+|||+|+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 68999996 99999999999999 9999999998765443321 12 234555542 2246899999999
Q ss_pred CCCCCC--------hH-------HHHHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 152 PSRSLD--------YP-------GDVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 152 ~~~~~~--------~~-------~~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
...... +. .+...+. . ...+ .+++|++||...|... .+ ...|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-----------~~--~~~Y~~s 152 (244)
T 3d3w_A 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV-----------TN--HSVYCST 152 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-----------TT--BHHHHHH
T ss_pred cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC-----------CC--CchHHHH
Confidence 653211 11 1111111 1 1124 6899999998876431 11 2479999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|.+.|.+++.+ + +.++||+.++++.
T Consensus 153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 186 (244)
T 3d3w_A 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSM 186 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeccccccc
Confidence 99999876643 3 7899999999986
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.28 E-value=2.3e-11 Score=104.23 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=86.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-C---eeeecCCcc-----------ccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-G---ITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-~---v~~d~~d~~-----------~~~~~D~V 146 (267)
.++|||||+ |.||++++++|+++ |++|++++|++++...+.. . . +..|+.|++ ...++|+|
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAK--GYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSAL 82 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 367999996 99999999999999 9999999998765443321 1 2 334565541 23479999
Q ss_pred EEccCCCCCCC--------hHH-------HH----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSLD--------YPG-------DV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~-------~~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+...... +.+ +. +.++ +...+.++||++||...|... .+ ...
T Consensus 83 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~~--~~~ 149 (234)
T 2ehd_A 83 VNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPF-----------KG--GAA 149 (234)
T ss_dssp EECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCC-----------TT--CHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCC-----------CC--Cch
Confidence 99999653211 111 11 1111 122357899999998876421 11 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|...|.+.+.+ + ++++||+.+..+.
T Consensus 150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 187 (234)
T 2ehd_A 150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF 187 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 999999888765432 3 7899999987653
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.5e-11 Score=104.53 Aligned_cols=135 Identities=15% Similarity=0.121 Sum_probs=91.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCCCCCchhhhc----cC-----eeeecCCcc---------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADHHDELIN----MG-----ITPSLKWTE--------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~--------- 138 (267)
++|||||+ |.||++++++|+++ |+ +|++++|++++...+.. .+ +..|+.|++
T Consensus 3 k~vlITGasggiG~~la~~l~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHh--cCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 67999996 99999999999999 99 99999998655433221 12 234555541
Q ss_pred --ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCC
Q 024494 139 --ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDED 195 (267)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~ 195 (267)
...++|+|||+|+...... +. .+..+++. ...+.+++|++||...|...
T Consensus 81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------- 152 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF-------- 152 (244)
T ss_dssp HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--------
T ss_pred HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCC--------
Confidence 2347999999999653221 11 11111111 12357899999999887531
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ ...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 153 ---~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (244)
T 2bd0_A 153 ---RH--SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPM 195 (244)
T ss_dssp ---TT--CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTT
T ss_pred ---CC--CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchh
Confidence 11 247999999998776432 3 7899999999985
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.27 E-value=9.9e-12 Score=106.82 Aligned_cols=136 Identities=13% Similarity=0.046 Sum_probs=91.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhh----cc--C----eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NM--G----ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~----~~--~----v~~d~~d~~-----------~~ 140 (267)
|++|||||+ |+||++++++|+++ |++|+++ +|++++...+. .. . +..|+.|.+ ..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAED--GFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 478999996 99999999999999 9999998 78765443321 11 1 344665541 23
Q ss_pred CCCCEEEEccCCCCCCC--------hH-------HH----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YP-------GD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~-------~~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.++|+|||+|+...... +. .+ ++.++ +...+.++||++||...+....
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~----------- 147 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNP----------- 147 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCS-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCC-----------
Confidence 58999999999653211 11 11 11111 1223678999999986543211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 148 ~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 189 (245)
T 2ph3_A 148 G--QANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189 (245)
T ss_dssp S--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred C--CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcc
Confidence 1 247999999888766543 3 7899999999875
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.27 E-value=3.4e-11 Score=104.53 Aligned_cols=137 Identities=10% Similarity=0.078 Sum_probs=91.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
++|||||+ |+||++++++|+++ |++|++++|++++...+ ...+ +..|+.|++ ...++
T Consensus 14 k~vlItGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEA--GARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 68999996 99999999999999 99999999986543322 1111 234555542 12479
Q ss_pred CEEEEccCCCC-CC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSR-SL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~-~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+... .. + +.+ +..+++ . ...+.+++|++||...+... +..+
T Consensus 92 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------~~~~- 161 (260)
T 3awd_A 92 DILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN---------RPQQ- 161 (260)
T ss_dssp CEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------SSSC-
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC---------CCCC-
Confidence 99999998643 11 1 111 111111 1 12357899999998765321 1112
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 162 -~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 202 (260)
T 3awd_A 162 -QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTL 202 (260)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred -ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccch
Confidence 247999999999876642 4 8999999999997
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=105.75 Aligned_cols=135 Identities=12% Similarity=0.032 Sum_probs=92.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-------ccC---eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMG---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-------~~~---v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|++++..++. ... +..|+.|++ ...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKE--GAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 999999999875543321 111 234565541 2348
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.. +...+. . ...+.+++|++||...|.... +
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 153 (263)
T 3ai3_A 86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLW-----------Y- 153 (263)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------T-
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------C-
Confidence 99999999964321 1 111 111111 1 123578999999998875321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 154 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (263)
T 3ai3_A 154 -EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPD 194 (263)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred -cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcc
Confidence 247999999988776542 3 7899999999986
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=3.6e-11 Score=105.35 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=92.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. ..+..|+.|++ ...++|+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999996 99999999999999 9999999998765433211 11344665541 2248999
Q ss_pred EEEccCCCCCC---C-----hH-------HHH----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSL---D-----YP-------GDV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~-------~~~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+..... + +. .+. +.++ +...+.+++|++||...|.... + ..
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~ 151 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTV-----------A--CH 151 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------T--BH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCC-----------C--ch
Confidence 99999965321 1 11 111 1111 1223578999999988764311 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (260)
T 1nff_A 152 GYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred hHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCc
Confidence 7999999998776542 3 7899999999875
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=2.9e-11 Score=103.56 Aligned_cols=133 Identities=16% Similarity=0.111 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----cc------CCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----AT------QKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~------~~~D~Vi~~a~~ 152 (267)
+++|||||+ |+||++++++|+++ |++|++++|+++ .+.+ ..+..|+.|++ .+ .++|+|||+|+.
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~-~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~ 76 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKAR--GYRVVVLDLRRE-GEDL--IYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 76 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCC-SSSS--EEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEccCcc-ccce--EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence 478999996 99999999999999 999999999876 3222 23445666542 12 378999999986
Q ss_pred CCCC------------ChHHH-------HHHHHH---H-h--CC------CCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 153 SRSL------------DYPGD-------VRLAAL---S-W--NG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 153 ~~~~------------~~~~~-------~~~l~~---~-~--~~------v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.... ++.+. ..+++. . . .+ .++||++||...|.... +
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~- 144 (242)
T 1uay_A 77 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI-----------G- 144 (242)
T ss_dssp CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----------T-
T ss_pred cCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCC-----------C-
Confidence 4321 11111 111111 1 1 11 13999999998886321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 145 -~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 185 (242)
T 1uay_A 145 -QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 185 (242)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred -CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchh
Confidence 347999999888775542 3 7999999999986
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=3.4e-11 Score=104.33 Aligned_cols=136 Identities=12% Similarity=0.087 Sum_probs=93.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-C---eeeecCCcc-------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G---ITPSLKWTE-------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~---v~~d~~d~~-------~~~~~D~Vi~~a~~ 152 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+++.+. . +..|+.|++ ...++|+|||+|+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag~ 84 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCcc
Confidence 78999996 99999999999999 99999999987655443311 2 234565542 24689999999996
Q ss_pred CCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHH
Q 024494 153 SRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (267)
Q Consensus 153 ~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~ 211 (267)
..... +.. +...+. . ...+.+++|++||...+... |.+...|+.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~~Y~~sK~ 152 (246)
T 2ag5_A 85 VHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG------------VVNRCVYSTTKA 152 (246)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC------------CTTBHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCC------------CCCCccHHHHHH
Confidence 54311 111 111111 1 12357899999998766421 101347999999
Q ss_pred HHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 212 KAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 212 ~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.|.+.+.+ + +.++||+.++++.
T Consensus 153 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 184 (246)
T 2ag5_A 153 AVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcc
Confidence 998876553 4 8899999999985
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.26 E-value=6.3e-12 Score=105.34 Aligned_cols=133 Identities=14% Similarity=0.061 Sum_probs=91.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cCeeeecCCcc----ccC---CCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWTE----ATQ---KFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~v~~d~~d~~----~~~---~~D~Vi~~a~~ 152 (267)
|++||||+ |+||++++++|+++ +|++++|++++.+.+.. ..+..|+.|++ .++ ++|+|||+|+.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 76 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGK 76 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999996 99999999999875 89999998765543321 22345666642 233 89999999986
Q ss_pred CCCC--------ChH-------HHHHHHHHHh--CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHH
Q 024494 153 SRSL--------DYP-------GDVRLAALSW--NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEK 215 (267)
Q Consensus 153 ~~~~--------~~~-------~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~ 215 (267)
.... ++. .+..+++... .+.++||++||...|... .+ ...|+.+|...|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~-----------~~--~~~Y~~sK~a~~~ 143 (207)
T 2yut_A 77 AGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQV-----------PG--FAAYAAAKGALEA 143 (207)
T ss_dssp CCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSS-----------TT--BHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCC-----------CC--cchHHHHHHHHHH
Confidence 4321 111 1122222222 246799999999988532 12 2479999999998
Q ss_pred HHHHc-------C--eeEEeeCccccCC
Q 024494 216 VILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 216 ~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+++.+ + ++++||+.++++.
T Consensus 144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~ 171 (207)
T 2yut_A 144 YLEAARKELLREGVHLVLVRLPAVATGL 171 (207)
T ss_dssp HHHHHHHHHHTTTCEEEEECCCCBCSGG
T ss_pred HHHHHHHHHhhhCCEEEEEecCcccCCC
Confidence 76653 3 8999999999875
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4e-11 Score=103.47 Aligned_cols=136 Identities=12% Similarity=0.028 Sum_probs=91.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cC---eeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG---ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~---v~~d~~d~~-----------~~~~~ 143 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++....+.. .. +..|+.|++ ...++
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CcEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 378999996 99999999999999 9999999998654433211 12 234555541 22469
Q ss_pred CEEEEccCCCCCC---C-----hHHH-----------HHHHHH--HhCCC-CcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL---D-----YPGD-----------VRLAAL--SWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~-----------~~~l~~--~~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+..... + +... ++.++. ...+. ++||++||...|.... +
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~- 151 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDP-----------S- 151 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCT-----------T-
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCC-----------C-
Confidence 9999999864321 1 1111 111111 12345 7999999988775321 1
Q ss_pred CCCHHHHHHHHHHHHHHH---------cC--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~---------~~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+. .+ ++++||+.++++.
T Consensus 152 -~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~ 194 (251)
T 1zk4_A 152 -LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred -CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchh
Confidence 24799999998876542 23 7899999999885
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.7e-11 Score=104.27 Aligned_cols=135 Identities=11% Similarity=0.056 Sum_probs=90.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cC---eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MG---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~---v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |+||++++++|+++ |++|++++|++++.+.+.. .. +..|+.|++ ...+
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASA--GSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 67999996 99999999999999 9999999998655433211 11 234555541 2348
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +. .+..++. +...+.++||++||...+.... +
T Consensus 86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~- 153 (248)
T 2pnf_A 86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNV-----------G- 153 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCT-----------T-
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCC-----------C-
Confidence 999999999654211 11 1111111 1123578999999976543210 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 154 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~ 194 (248)
T 2pnf_A 154 -QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDM 194 (248)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred -CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCch
Confidence 247999999988776542 3 7899999999986
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.25 E-value=8.1e-11 Score=100.94 Aligned_cols=143 Identities=11% Similarity=0.027 Sum_probs=90.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhhcc---C---eeeecCCcc----cc-------C--
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINM---G---ITPSLKWTE----AT-------Q-- 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~~~---~---v~~d~~d~~----~~-------~-- 141 (267)
+++|||||+ |.||++++++|+++ | ++|++++|++++.+.+... . +..|+.|++ .+ .
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~--g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCchHHHHHHHHHHhc--CCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 468999996 99999999999999 9 9999999987765544322 2 234555541 11 2
Q ss_pred CCCEEEEccCCCC-CC---C-----hHH-------HHHHHH---H---HhC------C-----CCcEEEEcCCccccCCC
Q 024494 142 KFPYVIFCAPPSR-SL---D-----YPG-------DVRLAA---L---SWN------G-----EGSFLFTSSSAIYDCSD 188 (267)
Q Consensus 142 ~~D~Vi~~a~~~~-~~---~-----~~~-------~~~~l~---~---~~~------~-----v~r~V~~SS~~VYg~~~ 188 (267)
++|+|||+|+... .. + +.. +..+++ . ... + .++||++||...+....
T Consensus 81 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 160 (250)
T 1yo6_A 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence 7999999998654 11 1 111 111111 1 111 3 68999999987764321
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.++.+..+ ...|+.+|.+.|.+++.+ + +.++||+.+..+.
T Consensus 161 ----~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (250)
T 1yo6_A 161 ----TSGSAQFP--VLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNL 209 (250)
T ss_dssp ----CSTTSSSC--BHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----
T ss_pred ----ccccccCC--ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCC
Confidence 11111112 358999999999876543 3 7889999998764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.24 E-value=3.8e-11 Score=104.33 Aligned_cols=142 Identities=12% Similarity=0.012 Sum_probs=92.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----h---ccC---eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----I---NMG---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~---~~~---v~~d~~d~~-----------~~~~ 142 (267)
++|||||+ |+||++++++|+++ |++|++++|+.++.... . ... +..|+.|++ ....
T Consensus 15 k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 67999996 99999999999999 99999999976543221 1 112 234555531 2356
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHHH------HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAAL------SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~~------~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+...... +.. +..+++. ...+ .++||++||...+...... ..+..+
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~----~~~~~~ 168 (265)
T 1h5q_A 93 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS----LNGSLT 168 (265)
T ss_dssp EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE----TTEECS
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc----cccccc
Confidence 999999999653221 111 1111111 1113 4799999998776432110 112222
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 169 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 209 (265)
T 1h5q_A 169 --QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 209 (265)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccc
Confidence 357999999999876543 3 7899999999986
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=9e-11 Score=104.26 Aligned_cols=136 Identities=13% Similarity=-0.001 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-------ccC---eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-------NMG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-------~~~---v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |+||++++++|+++ |++|++++|++++...+. ... +..|+.|++ ...
T Consensus 26 ~k~vlITGasggiG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 26 GKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 999999999875543221 111 234555531 234
Q ss_pred CCCEEEEccCCCCCC-----C---h-------HHHHHHHH---H---H-hCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL-----D---Y-------PGDVRLAA---L---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~---~-------~~~~~~l~---~---~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.+|+|||+|+..... . + ..+..++. . . ..+.+++|++||...+... .
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----------~ 172 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----------G 172 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------T
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----------C
Confidence 789999999964321 1 1 11111111 1 1 2346799999998776421 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + ++++||+.+++++
T Consensus 173 ~--~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 214 (302)
T 1w6u_A 173 F--VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214 (302)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred C--cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcc
Confidence 1 247999999999876543 3 7899999999874
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.8e-10 Score=100.07 Aligned_cols=134 Identities=11% Similarity=0.069 Sum_probs=87.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~~ 152 (267)
+++||||+ |.||++++++|+++ |++|++++|+++... ..-..+..|+.|++ ...++|+|||+|+.
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~ 84 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEA--GAKVTGFDQAFTQEQ-YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGI 84 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCCCSSC-CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCchhhhc-CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 68999996 99999999999999 999999999865321 11012334665541 23489999999996
Q ss_pred CCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHH
Q 024494 153 SRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (267)
Q Consensus 153 ~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~ 211 (267)
.... + +.+ +...+. +...+.+++|++||...+... .+ ...|+.+|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~--~~~Y~~sK~ 151 (250)
T 2fwm_X 85 LRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPR-----------IG--MSAYGASKA 151 (250)
T ss_dssp CCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TT--CHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC-----------CC--CchHHHHHH
Confidence 4321 1 111 111111 122357899999998876421 11 347999999
Q ss_pred HHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 212 KAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 212 ~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|.+.+.+ + +.++||+.++++.
T Consensus 152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 183 (250)
T 2fwm_X 152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDM 183 (250)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHhCccCCEEEEEECCcccCcc
Confidence 998876543 3 8899999999885
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=7.9e-11 Score=102.35 Aligned_cols=135 Identities=13% Similarity=0.090 Sum_probs=89.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++|||||+ |.||++++++|+++ |++|++++| +++....+. ..+ +..|+.|++ ...+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 78999996 99999999999999 999999999 554332221 111 234555541 1247
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+...... +.+ +..++. . ...+ .++||++||...+.. ..+
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~-----------~~~ 154 (261)
T 1gee_A 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP-----------WPL 154 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC-----------CTT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC-----------CCC
Confidence 999999999653211 111 111111 1 1224 689999999776531 112
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 155 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 195 (261)
T 1gee_A 155 --FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred --ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCch
Confidence 357999998888765542 3 7899999999986
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.22 E-value=9.8e-11 Score=102.32 Aligned_cols=135 Identities=13% Similarity=0.066 Sum_probs=91.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--C---eeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G---ITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~---v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|+++ |++|++++|++++...+.. . . +..|+.|++ ...++|+|
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKA--GATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999996 99999999999999 9999999998765443321 1 2 345666542 22489999
Q ss_pred EEccCCCCCCC--------hHHH-------HHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSRSLD--------YPGD-------VRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~-------~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
||+|+...... +... ...+. . ...+ .+++|++||...+... | + ..
T Consensus 91 v~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~ 157 (263)
T 3ak4_A 91 CANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA---------P--L--LA 157 (263)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------T--T--CH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC---------C--C--ch
Confidence 99999653211 1111 11111 1 1224 6899999998766321 1 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (263)
T 3ak4_A 158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChh
Confidence 7999999988776543 3 7899999999885
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.7e-11 Score=102.81 Aligned_cols=134 Identities=14% Similarity=0.115 Sum_probs=82.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++|||||+ |.||++++++|+++ |++|+++ .|+++..+.+. ..+ +..|+.|++ ...+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~--G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNM--GANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred cEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 78999996 99999999999999 9999999 56655443221 112 234555542 1248
Q ss_pred CCEEEEccCCCCCC--------ChH-------HHHHHHH---H---HhCCCCcEEEEcCC-ccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL--------DYP-------GDVRLAA---L---SWNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~--------~~~-------~~~~~l~---~---~~~~v~r~V~~SS~-~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+..... ++. .+..++. . ...+.++||++||. +.|+.+ +
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~------------~ 151 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNA------------G 151 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------------------
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCC------------C
Confidence 99999999864321 111 1111111 1 12367899999997 455431 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.++||+.+.++.
T Consensus 152 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (247)
T 2hq1_A 152 --QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM 192 (247)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred --CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccc
Confidence 247999999998876653 3 7889999998764
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-10 Score=101.48 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=90.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCC-c----cccCCCCEEEEccCCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKW-T----EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d-~----~~~~~~D~Vi~~a~~~~~ 155 (267)
..+++||||+ |.||++++++|+++ |++|++++|+++...++.. ..+ .|+.+ . +...++|+|||+|+....
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~~~ 94 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRSGHRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGPKA 94 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHTCSEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHhhCCeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 3478999996 99999999999999 9999999998643332211 011 34421 1 234489999999996532
Q ss_pred CC--------hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 156 LD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 156 ~~--------~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
.. +.. + ++.++ +...+.+++|++||...|.... + ...|+.+|.+.|
T Consensus 95 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~~sK~a~~ 161 (249)
T 1o5i_A 95 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIE-----------N--LYTSNSARMALT 161 (249)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------T--BHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCC-----------C--CchHHHHHHHHH
Confidence 11 111 1 11111 1223678999999998875311 1 247999999888
Q ss_pred HHHHHc-------C--eeEEeeCccccCC
Q 024494 215 KVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 215 ~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.+.. + +.++||+.++++.
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 190 (249)
T 1o5i_A 162 GFLKTLSFEVAPYGITVNCVAPGWTETER 190 (249)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCCccCc
Confidence 765432 3 7899999999986
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=7.2e-11 Score=102.83 Aligned_cols=135 Identities=10% Similarity=0.054 Sum_probs=91.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++.+ .. +..|+.|++ ...++|+
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999996 99999999999999 9999999998765443321 12 334565541 2346899
Q ss_pred EEEccCCCCCC---C-----hHHH-----------HHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSL---D-----YPGD-----------VRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~-----------~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+..... + +... .+.++. ...+ +++|++||...|.... + ..
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~-----------~--~~ 149 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIE-----------Q--YA 149 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCT-----------T--BH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCC-----------C--Cc
Confidence 99999965321 1 1111 111111 1234 8999999988774211 1 24
Q ss_pred HHHHHHHHHHHHHHHc---------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF---------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~---------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 190 (253)
T 1hxh_A 150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPM 190 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHH
T ss_pred cHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCch
Confidence 7999999988765542 5 7899999999875
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.1e-10 Score=102.01 Aligned_cols=136 Identities=14% Similarity=0.068 Sum_probs=92.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------cc-C
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------AT-Q 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~-~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++..+.+. ..+ +..|+.|++ .. .
T Consensus 9 ~k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 9 GCTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 999999999876543321 112 234565541 22 6
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+...... +.. +..++. +...+.+++|++||...+... | +
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~ 155 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV---------P--Y 155 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC---------T--T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC---------C--C
Confidence 7999999999653211 111 111111 122456899999998766421 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +.+++|+.++++.
T Consensus 156 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 196 (260)
T 2ae2_A 156 --EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196 (260)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHH
T ss_pred --cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcc
Confidence 247999999999876643 3 7889999998764
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.3e-10 Score=101.54 Aligned_cols=135 Identities=11% Similarity=0.040 Sum_probs=92.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+...++.. ..+..|+.|++ ...++|+|
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVRE--GATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67999996 99999999999999 9999999998765443321 12345666541 23489999
Q ss_pred EEccCCCCCCC--------hHH-------HHHHHHH------HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSRSLD--------YPG-------DVRLAAL------SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~-------~~~~l~~------~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
||+|+...... +.+ +..++.. ...+ .+++|++||...|.... . ..
T Consensus 87 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~ 153 (259)
T 4e6p_A 87 VNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEA-----------L--VA 153 (259)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------T--BH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCC-----------C--Ch
Confidence 99999754211 111 1111111 1112 56999999987764211 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 192 (259)
T 4e6p_A 154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEH 192 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccch
Confidence 7999999999876543 3 7889999999997
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.21 E-value=9.7e-11 Score=101.74 Aligned_cols=134 Identities=11% Similarity=0.084 Sum_probs=91.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++. ++..|+.|++ ...++|+|||+|+
T Consensus 15 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 90 (247)
T 1uzm_A 15 SRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGLF--GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 90 (247)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTSE--EEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHhc--CeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 378999996 99999999999999 999999999877655443 4666776642 2347899999999
Q ss_pred CCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
..... + +.+ +...+. +...+.+++|++||...+... + + ...|+.+|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~~Y~~sK 157 (247)
T 1uzm_A 91 LSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI---------G--N--QANYAASK 157 (247)
T ss_dssp CCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------C--CHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCC---------C--C--ChhHHHHH
Confidence 65321 1 111 111111 122356899999998654321 1 1 24799999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 190 (247)
T 1uzm_A 158 AGVIGMARSIARELSKANVTANVVAPGYIDTDM 190 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccc
Confidence 9888766542 3 7889999998764
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.3e-10 Score=101.32 Aligned_cols=134 Identities=10% Similarity=0.050 Sum_probs=91.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cCeeeecCCcc-----------ccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MGITPSLKWTE-----------ATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~v~~d~~d~~-----------~~~~~D~Vi~ 148 (267)
+++||||+ |.||++++++|+++ |++|++++|+++. .++.. ..+..|+.|++ ...++|+|||
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~ 83 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 83 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 68999996 99999999999999 9999999998765 33221 12345666541 2347999999
Q ss_pred ccCCCCCC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+|+..... + +.+ +..++. . ...+.+++|++||...+... | + ...|+
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~--~--~~~Y~ 150 (256)
T 2d1y_A 84 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE---------Q--E--NAAYN 150 (256)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC---------T--T--BHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC---------C--C--ChhHH
Confidence 99965321 1 111 111111 1 12356899999998765321 1 1 24799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 186 (256)
T 2d1y_A 151 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEA 186 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCch
Confidence 9999998776543 3 7889999998763
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=7.2e-11 Score=102.63 Aligned_cols=135 Identities=14% Similarity=0.082 Sum_probs=89.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------------cC---eeeecCCcc---------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------------MG---ITPSLKWTE--------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------------~~---v~~d~~d~~--------- 138 (267)
++|||||+ |.||++++++|+++ |++|++++|+++....+.. .. +..|+.|++
T Consensus 8 k~vlITGasggiG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGE--GATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 68999996 99999999999999 9999999998655433211 11 234555541
Q ss_pred --ccCCC-CEEEEccCCCCCCC--------hH-------HHHHHHHH------HhCC-CCcEEEEcCCccccCCCCCccC
Q 024494 139 --ATQKF-PYVIFCAPPSRSLD--------YP-------GDVRLAAL------SWNG-EGSFLFTSSSAIYDCSDNGACD 193 (267)
Q Consensus 139 --~~~~~-D~Vi~~a~~~~~~~--------~~-------~~~~~l~~------~~~~-v~r~V~~SS~~VYg~~~~~~~~ 193 (267)
...+. |+|||+|+...... +. .+..+++. ...+ .++||++||...+....
T Consensus 86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 160 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV----- 160 (264)
T ss_dssp HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT-----
T ss_pred HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC-----
Confidence 12345 99999999654211 11 11111211 1123 57999999986543211
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 161 ------~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 202 (264)
T 2pd6_A 161 ------G--QTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPM 202 (264)
T ss_dssp ------T--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC
T ss_pred ------C--ChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccc
Confidence 1 247999999888776542 3 7999999999997
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=9.5e-11 Score=102.21 Aligned_cols=136 Identities=14% Similarity=0.019 Sum_probs=92.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++.. . .+..|+.|++ ...++|+
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999996 99999999999999 9999999998765443321 1 1234565542 2348999
Q ss_pred EEEccCCCCCCC--------hHHH-------H----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~-------~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+...... +... . +.++ +...+.+++|++||...|... + + ..
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~ 149 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL---------A--L--TS 149 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------T--T--CH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC---------C--C--ch
Confidence 999999653211 1111 1 1111 122357899999998876421 1 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 150 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1hdc_A 150 SYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM 188 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc
Confidence 7999999998776543 3 7889999999874
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.5e-10 Score=99.93 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=91.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCc----------cccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT----------EATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~----------~~~~~~D~Vi~~a~ 151 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..+... ..+..|+.|. +...++|+|||+|+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~Ag 79 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVAR--GYRVAIASRNPEEAAQSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAAA 79 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 368999996 99999999999999 9999999998765221110 1123455441 12357999999998
Q ss_pred CCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
..... + +.+ +...+. +...+.+++|++||...|.... .+ + ...|+.+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~--~--~~~Y~~sK 148 (239)
T 2ekp_A 80 VNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-------PV--P--IPAYTTAK 148 (239)
T ss_dssp CCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-------TS--C--CHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC-------CC--C--CccHHHHH
Confidence 64321 1 111 111111 1223678999999998875321 01 1 35799999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|.+.+.+ + +.++||+.++++.
T Consensus 149 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 181 (239)
T 2ekp_A 149 TALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181 (239)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCCccCch
Confidence 9988766542 3 7899999999885
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.6e-10 Score=102.18 Aligned_cols=136 Identities=11% Similarity=0.093 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-C---eeeecCCcc-----------ccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-G---ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-~---v~~d~~d~~-----------~~~~~ 143 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++..+++. .. . +..|+.|++ ...++
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEA--GARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 368999996 99999999999999 999999999875543321 11 1 234555541 23479
Q ss_pred CEEEEccCCCCCC---C-----hHH-------HH----HHHH--HHhCCC----CcEEEEcCCccccCCCCCccCCCCCC
Q 024494 144 PYVIFCAPPSRSL---D-----YPG-------DV----RLAA--LSWNGE----GSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~-------~~----~~l~--~~~~~v----~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
|+|||+|+..... + +.. +. +.++ +...+. +++|++||...|....
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~---------- 176 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMG---------- 176 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCC----------
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCC----------
Confidence 9999999864321 1 111 11 1111 111233 7999999988764321
Q ss_pred CCCCCC-HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRS-PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~-~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. .. .|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 177 -~--~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 219 (276)
T 2b4q_A 177 -E--QAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRM 219 (276)
T ss_dssp -C--SCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTT
T ss_pred -C--CccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcc
Confidence 1 12 6999999998776543 3 7889999999876
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=6.2e-11 Score=102.43 Aligned_cols=136 Identities=16% Similarity=0.098 Sum_probs=90.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhhhc----cC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELIN----MG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l~~----~~-----v~~d~~d~~-----------~~~~ 142 (267)
++|||||+ |+||++++++|+++ |++|++++|+ +++.+.+.. .+ +..|+.|++ ...+
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARA--GAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEeCCCChHHHHHHHHHHHC--CCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 78999996 99999999999999 9999999998 665443211 11 234555542 1238
Q ss_pred CCEEEEccCC-CCCCC--------hHH-------HHHHHH------HHhCC--C---CcEEEEcCCccccCCCCCccCCC
Q 024494 143 FPYVIFCAPP-SRSLD--------YPG-------DVRLAA------LSWNG--E---GSFLFTSSSAIYDCSDNGACDED 195 (267)
Q Consensus 143 ~D~Vi~~a~~-~~~~~--------~~~-------~~~~l~------~~~~~--v---~r~V~~SS~~VYg~~~~~~~~E~ 195 (267)
+|+|||+|+. ..... +.. +...+. +...+ . +++|++||...+...
T Consensus 86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------- 157 (258)
T 3afn_B 86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG-------- 157 (258)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC--------
T ss_pred CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC--------
Confidence 9999999986 32111 111 111111 11111 2 789999998766411
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..+ ...|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 158 --~~~--~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 201 (258)
T 3afn_B 158 --GPG--AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAF 201 (258)
T ss_dssp --CTT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGG
T ss_pred --CCC--chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccc
Confidence 011 347999999999876543 3 7899999999986
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.18 E-value=2.5e-10 Score=99.17 Aligned_cols=135 Identities=13% Similarity=0.124 Sum_probs=89.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchh-hhccC-----eeeecCCcc-----------ccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDE-LINMG-----ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~-l~~~~-----v~~d~~d~~-----------~~~~~D~ 145 (267)
+++||||+ |.||++++++|+++ |++|++++|++ ++..+ +...+ +..|+.|++ ...++|+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 67999996 99999999999999 99999999987 44322 22112 334665542 2358999
Q ss_pred EEEccCCCCCCC--------hHH-------HH----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPG-------DV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+...... +.+ +. +.++ +...+.+++|++||...|...+ + ..
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~ 152 (249)
T 2ew8_A 86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIE-----------A--YT 152 (249)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCS-----------S--CH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------C--ch
Confidence 999999653211 111 11 1111 1223578999999988775311 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...|.+.+.+ + +.+++|+.++++.
T Consensus 153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (249)
T 2ew8_A 153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCcc
Confidence 7999999998776543 3 7889999999875
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.2e-10 Score=100.77 Aligned_cols=137 Identities=14% Similarity=0.086 Sum_probs=91.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-----ccC-----eeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-----~~~-----v~~d~~d~~-----------~~ 140 (267)
..+++||||+ |.||++++++|+++ |++|++++|++++...+. ..+ +..|+.|++ ..
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3478999996 99999999999999 999999999865543221 112 234565541 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCcc-ccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAI-YDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~ 198 (267)
.++|+|||+|+...... +.. +...+. . ...+.+++|++||..+ +. +.
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-----------~~ 166 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV-----------TM 166 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC-----------CS
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc-----------CC
Confidence 47999999999654221 111 111111 1 1235689999999873 21 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ ...|+.+|...|.+.+.+ + +.+++|+.+..+.
T Consensus 167 ~~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 209 (267)
T 1vl8_A 167 PN--ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209 (267)
T ss_dssp SS--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred CC--ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccc
Confidence 11 347999999998876543 3 7899999998875
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=101.85 Aligned_cols=135 Identities=16% Similarity=0.124 Sum_probs=90.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------cc-CC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------AT-QK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~-~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+++. ..+ +..|+.|++ .. .+
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CEEEEECCcchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 78999996 99999999999999 999999999876543321 112 234555541 23 67
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.. +...+. +...+.+++|++||...|...+ +
T Consensus 100 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------~- 167 (273)
T 1ae1_A 100 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALP-----------S- 167 (273)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCT-----------T-
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCC-----------C-
Confidence 99999999965321 1 111 111111 1123568999999998875321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 168 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (273)
T 1ae1_A 168 -VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 208 (273)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCch
Confidence 247999999998776543 3 7899999999885
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=2.8e-10 Score=98.68 Aligned_cols=134 Identities=16% Similarity=0.152 Sum_probs=90.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC---eeeecCCcc-----------ccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG---ITPSLKWTE-----------ATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~---v~~d~~d~~-----------~~~~~D~Vi~ 148 (267)
+++||||+ |.||++++++|+++ |++|++++|++++..++.. .+ +..|+.|++ ...++|+|||
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 68999996 99999999999999 9999999998765544322 12 334665541 2346999999
Q ss_pred ccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+|+...... +. .+...+. . ...+.+++|++||...++.. . ...|+
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~--~~~Y~ 149 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL------------G--QANYA 149 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT------------T--CHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchhcCCC------------C--chhHH
Confidence 999653221 11 1111111 1 12356899999998844421 1 24799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+|...+.+.+.. + +.+++|+.+..+.
T Consensus 150 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 185 (245)
T 1uls_A 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (245)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcc
Confidence 9998887665442 3 7899999998775
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=1.9e-10 Score=101.59 Aligned_cols=135 Identities=11% Similarity=0.037 Sum_probs=90.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+.+ ...+ +..|+.|++ ...++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 67999996 99999999999999 99999999987654322 1112 234565541 23479
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHHHH--------hCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAALS--------WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~~~--------~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
|+|||+|+...... +.+ +..++..+ ..+.++||++||...+... + +
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~--~ 169 (277)
T 2rhc_B 101 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV---------V--H 169 (277)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCC---------T--T
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCC---------C--C
Confidence 99999999653221 111 11111111 1145799999998755321 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 170 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 210 (277)
T 2rhc_B 170 --AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM 210 (277)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHH
T ss_pred --CccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCch
Confidence 247999999988776543 2 7899999999875
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.2e-10 Score=102.44 Aligned_cols=135 Identities=15% Similarity=0.091 Sum_probs=90.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-----C---eeeecCCcc-----------cc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----G---ITPSLKWTE-----------AT 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-----~---v~~d~~d~~-----------~~ 140 (267)
+++||||+ |.||++++++|+++ |++|++++|++++..++. .. . +..|+.|++ ..
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 67999996 99999999999999 999999999876543321 11 1 234555541 23
Q ss_pred CCCCEEEEccCCCCCCC----------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD----------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~----------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.++|+|||+|+...... +.. +...+. +...+ +++|++||...+... .
T Consensus 105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~--------~- 174 (297)
T 1xhl_A 105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQA--------H- 174 (297)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSC--------C-
T ss_pred CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCC--------C-
Confidence 47999999998543211 111 111111 11234 899999998876431 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
| ....|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 175 --~-~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~ 217 (297)
T 1xhl_A 175 --S-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGF 217 (297)
T ss_dssp --T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSH
T ss_pred --C-CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcc
Confidence 1 1247999999988776542 3 8899999999875
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.2e-10 Score=100.83 Aligned_cols=137 Identities=9% Similarity=-0.003 Sum_probs=93.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCcc-----------ccCCCCEEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWTE-----------ATQKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~-----------~~~~~D~Vi 147 (267)
+.+++||||+ |.||++++++|+++ |++|++++|+.++...+.... +..|+.|.+ ...++|+||
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 92 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEE--GHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV 92 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 3477999996 99999999999999 999999999876554433222 344666541 235899999
Q ss_pred EccCCCCCCC--------hH-------HHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 148 FCAPPSRSLD--------YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 148 ~~a~~~~~~~--------~~-------~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
|+|+...... +. .+...+. +...+.+++|++||...|.... . ...|
T Consensus 93 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-----------~--~~~Y 159 (266)
T 3p19_A 93 NNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFP-----------D--HAAY 159 (266)
T ss_dssp ECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT-----------T--CHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCC-----------C--CchH
Confidence 9999653211 11 1111111 1223678999999988764211 1 2479
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (266)
T 3p19_A 160 CGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccch
Confidence 99999988765542 3 7889999999875
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=101.40 Aligned_cols=135 Identities=10% Similarity=0.076 Sum_probs=90.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------c-C---eeeecCCcc----ccC------C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------M-G---ITPSLKWTE----ATQ------K 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~-~---v~~d~~d~~----~~~------~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|++++...+.+ . . +..|+.|++ .++ +
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARN--GARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 68999996 99999999999999 9999999998755433211 0 2 234565541 111 3
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHH----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +. .+. +.++ +...+.+++|++||...|.... +
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 153 (260)
T 2z1n_A 86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQ-----------D- 153 (260)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------T-
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCC-----------C-
Confidence 999999999643211 11 111 1111 1123678999999998874311 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 154 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 194 (260)
T 2z1n_A 154 -LALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDR 194 (260)
T ss_dssp -BHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCC
T ss_pred -CchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccch
Confidence 247999999888765543 3 7899999999886
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-10 Score=100.00 Aligned_cols=134 Identities=12% Similarity=0.065 Sum_probs=90.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a~ 151 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++..... ..+..|+.|++ ...++|+|||+|+
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~--~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag 83 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDE--GSKVIDLSIHDPGEAKY--DHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG 83 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSCCCSCSS--EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEecCcccCCce--EEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 378999996 99999999999999 99999999987642111 12345666542 2347999999999
Q ss_pred CCCCC---C-----hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSL---D-----YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~---~-----~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
..... + +. .+...+. . ...+.+++|++||...|.... + ...|+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~~sK 150 (264)
T 2dtx_A 84 IESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK-----------N--ASAYVTSK 150 (264)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-----------T--BHHHHHHH
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-----------C--chhHHHHH
Confidence 64321 1 11 1111111 1 123568999999988764311 1 24799999
Q ss_pred HHHHHHHHHc----C----eeEEeeCccccCC
Q 024494 211 LKAEKVILEF----G----GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~----~----~~IlR~~~iyGp~ 234 (267)
.+.|.+.+.+ + +.+++|+.+.++.
T Consensus 151 ~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~ 182 (264)
T 2dtx_A 151 HAVIGLTKSIALDYAPLLRCNAVCPATIDTPL 182 (264)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSBCSHH
T ss_pred HHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcc
Confidence 9998876543 2 6889999998764
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.5e-10 Score=100.56 Aligned_cols=136 Identities=10% Similarity=0.066 Sum_probs=93.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEcc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a 150 (267)
..++|||||+ |.||++++++|+++ |++|++++|+.+..... ...+..|+.|++ ...++|+|||+|
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nA 89 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRY--GAKVVSVSLDEKSDVNV-SDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNA 89 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCC--CTTS-SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCchhccCc-eeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3488999996 99999999999999 99999999987654321 123455666641 235899999999
Q ss_pred CCCCCCC--------hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 151 PPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 151 ~~~~~~~--------~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
+...... +.+. ...+. +...+.+++|++||...|.... . ...|+.+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~as 156 (269)
T 3vtz_A 90 GIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATK-----------N--AAAYVTS 156 (269)
T ss_dssp CCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCT-----------T--CHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCC-----------C--ChhHHHH
Confidence 9654321 1111 11111 1123568999999998875321 1 2479999
Q ss_pred HHHHHHHHHHc------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~------~--~~IlR~~~iyGp~ 234 (267)
|.+.|.+.+.+ + +..++|+.++++.
T Consensus 157 Kaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~ 189 (269)
T 3vtz_A 157 KHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPM 189 (269)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcc
Confidence 99998876543 3 7889999998874
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.17 E-value=9.9e-11 Score=100.60 Aligned_cols=135 Identities=13% Similarity=0.064 Sum_probs=89.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
++|||||+ |+||++++++|+++ |++|+++ +|+++..+.+. ..+ +..|+.|++ ...+
T Consensus 2 k~vlVTGasggiG~~la~~l~~~--G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 9999995 77755443221 111 234555541 2347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +.+ +..++. . ...+.++||++||...+.... +
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~-----------~- 147 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNI-----------G- 147 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T-
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCC-----------C-
Confidence 999999999654211 111 111111 1 123578999999986653211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 148 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (244)
T 1edo_A 148 -QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDM 188 (244)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHH
T ss_pred -CccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccch
Confidence 247999999888765542 3 7899999999875
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-10 Score=101.99 Aligned_cols=135 Identities=9% Similarity=0.038 Sum_probs=87.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c-------cC---eeeecCCcc----------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-------MG---ITPSLKWTE---------- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~-------~~---v~~d~~d~~---------- 138 (267)
.++|||||+ |+||++++++|+++ |++|++++|+.+....+. . .. +..|+.|++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 378999996 99999999999999 999999999865443221 1 11 234555541
Q ss_pred -ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHHH---H---hCCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 139 -ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAAL---S---WNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~---~---~~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
...++|+|||+|+...... +. .+..+++. . ..+.+++|++||...++.
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---------- 165 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF---------- 165 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC----------
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecccCC----------
Confidence 2246999999999543211 11 11112211 1 113578999999873321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
| . ...|+.+|...+.+.+.. + ++++||+.++|+.
T Consensus 166 ~--~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 166 P--L--AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp T--T--CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred C--c--chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 1 1 236888888887665432 3 8999999999983
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.17 E-value=2.1e-10 Score=100.07 Aligned_cols=135 Identities=15% Similarity=0.107 Sum_probs=91.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+++ ...+ +..|+.|++ ...++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQD--GAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 78999996 99999999999999 99999999987554322 1112 234555531 23489
Q ss_pred CEEEEccCCCCC-C---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-L---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~-~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+.... . + +.+ +..++. +...+.+++|++||...|.... +
T Consensus 93 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 160 (260)
T 2zat_A 93 DILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFP-----------N- 160 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------T-
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCC-----------C-
Confidence 999999986421 1 1 111 111111 1224678999999998875311 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +.+++|+.+..+.
T Consensus 161 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 201 (260)
T 2zat_A 161 -LGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNF 201 (260)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSST
T ss_pred -chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCcc
Confidence 247999999998876653 3 7889999999885
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.8e-10 Score=100.23 Aligned_cols=137 Identities=17% Similarity=0.111 Sum_probs=90.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-------eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-------ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-------v~~d~~d~~-----------~~~ 141 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+.+. ..+ +..|+.|++ ...
T Consensus 33 k~vlVTGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 67999996 99999999999999 999999999865543321 111 234565542 124
Q ss_pred CCCEEEEccCCCCCCC--------hH-------HH----HHHHH--HHhCCC--CcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YP-------GD----VRLAA--LSWNGE--GSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~-------~~----~~~l~--~~~~~v--~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
++|+|||+|+...... +. .+ ++.++ +...+. +++|++||...|... +.
T Consensus 111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~---------~~ 181 (279)
T 1xg5_A 111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PL 181 (279)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC---------CC
Confidence 7999999998643211 11 11 12221 122344 799999999877421 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHH---------cC--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILE---------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~---------~~--~~IlR~~~iyGp~ 234 (267)
.+ ...|+.+|.+.|.+.+. .+ +.+++|+.+.++.
T Consensus 182 ~~--~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~ 226 (279)
T 1xg5_A 182 SV--THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQF 226 (279)
T ss_dssp GG--GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSH
T ss_pred CC--CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchh
Confidence 11 24799999988766442 23 7889999998774
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=6.7e-10 Score=97.80 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=94.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+...+... . .+..|+.|++ ...+.|+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 88 (271)
T 3tzq_B 11 NKVAIITGACGGIGLETSRVLARA--GARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI 88 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999996 99999999999999 9999999999877654321 1 1334665541 2348999
Q ss_pred EEEccCCCCC-C----C-----hH-------HHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 146 VIFCAPPSRS-L----D-----YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 146 Vi~~a~~~~~-~----~-----~~-------~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|||+|+.... . + +. .+...+. +...+.+++|++||...|.... +
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------~-- 155 (271)
T 3tzq_B 89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYD-----------M-- 155 (271)
T ss_dssp EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCS-----------S--
T ss_pred EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCC-----------C--
Confidence 9999996522 1 1 11 1111111 1224568999999988764311 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 156 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 196 (271)
T 3tzq_B 156 STAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPR 196 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCcc
Confidence 247999999998776542 3 7889999999986
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=1.9e-10 Score=101.83 Aligned_cols=136 Identities=11% Similarity=0.076 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.++|||||+ |.||++++++|+++ |++|++++|++++.+.+. ..+ +..|+.|++ ...+
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 378999996 99999999999999 999999998765443221 112 234555541 2357
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.+ + ++.++ +...+.++||++||...+.... +
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~- 189 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNV-----------G- 189 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T-
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCC-----------C-
Confidence 99999999965321 1 111 1 11111 1123568999999987654211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + ++++||+.++++.
T Consensus 190 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 230 (285)
T 2c07_A 190 -QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230 (285)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCc
Confidence 247999999888765542 3 7999999999885
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.5e-10 Score=100.86 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=90.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-----C---eeeecCCcc-----------c
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----G---ITPSLKWTE-----------A 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-----~---v~~d~~d~~-----------~ 139 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++.+++. .. . +..|+.|++ .
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 6 NKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 368999996 99999999999999 999999999876543321 11 2 234565541 2
Q ss_pred cCCCCEEEEccCCCCCC-------C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCC
Q 024494 140 TQKFPYVIFCAPPSRSL-------D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~-------~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
..++|+|||+|+..... + +.. +..++. . ...+ +++|++||...+...
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 155 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQA------- 155 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSC-------
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCC-------
Confidence 34799999999864321 1 111 111111 1 1124 899999998876432
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. | +...|+.+|.+.|.+.+.. + +.+++|+.++++.
T Consensus 156 -~---~-~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (280)
T 1xkq_A 156 -Q---P-DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGF 199 (280)
T ss_dssp -C---C-SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSH
T ss_pred -C---C-cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCc
Confidence 0 1 1247999999988776543 3 7899999999885
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.8e-10 Score=100.91 Aligned_cols=136 Identities=14% Similarity=0.106 Sum_probs=92.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC------eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG------ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~------v~~d~~d~-----------~~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|+.++..++. ..+ +..|+.|+ +...+
T Consensus 42 k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARA--GANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 999999999877654332 111 34466654 13458
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.+ +...+.. ...+.+++|++||...+... . |
T Consensus 120 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~----------~-~- 187 (293)
T 3rih_A 120 LDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG----------Y-P- 187 (293)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB----------C-T-
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC----------C-C-
Confidence 99999999965321 1 111 1111111 22357899999997643110 0 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+...|+.+|...|.+.+.+ + +..++|+.++++.
T Consensus 188 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 229 (293)
T 3rih_A 188 GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcc
Confidence 1357999999998776542 3 7889999999985
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.15 E-value=4e-10 Score=98.08 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=91.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhhhccC-----eeeecCCcc-----------ccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELINMG-----ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l~~~~-----v~~d~~d~~-----------~~~~~D~ 145 (267)
+++||||+ |.||++++++|+++ |++|++++|+++.. .++...+ +..|+.|++ ...++|+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARA--GANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 78999996 99999999999999 99999999987521 1221112 234555541 2238999
Q ss_pred EEEccCCCCCCC--------hHHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+...... +... ++.++ +...+.+++|++||...|.... + ..
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~ 149 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGST-----------G--KA 149 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT-----------T--BH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCC-----------C--ch
Confidence 999999653211 1111 11111 1234578999999988764311 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 188 (255)
T 2q2v_A 150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPL 188 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcc
Confidence 7999999988776542 3 7899999999986
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.15 E-value=3.2e-10 Score=100.19 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=91.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hcc-----C---eeeecCCcc-----------c
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM-----G---ITPSLKWTE-----------A 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~-----~---v~~d~~d~~-----------~ 139 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++...+. ... . +..|+.|++ .
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAA--GASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 378999996 99999999999999 99999999987654332 111 1 234555541 2
Q ss_pred cCCCCEEEEccCCC-CCC---C-----hH-------HHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 140 TQKFPYVIFCAPPS-RSL---D-----YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~-~~~---~-----~~-------~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
..+.|+|||+|+.. ... + +. .+...+. +...+.++||++||...|....
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 159 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHR--------- 159 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT---------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCC---------
Confidence 35799999999962 211 1 11 1111111 1123456999999988774321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 160 --~--~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 201 (281)
T 3svt_A 160 --W--FGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDL 201 (281)
T ss_dssp --T--CTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred --C--ChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 1 358999999999876643 2 7889999999885
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.7e-10 Score=101.46 Aligned_cols=135 Identities=14% Similarity=0.039 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc--C---eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--G---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~--~---v~~d~~d~~-----------~~~~ 142 (267)
.++|||||+ |.||++++++|+++ |++|++++|+++..+.+. .. . +..|+.|++ ...+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 378999996 99999999999999 999999999875543321 11 2 234555531 2347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +.. +...+. . ...+.++||++||...|.... +
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~- 176 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVP-----------F- 176 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHH-----------H-
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCC-----------C-
Confidence 999999999654321 111 111111 1 224678999999998775311 1
Q ss_pred CCCHHHHHHHHHHHHHHH----c------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILE----F------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~----~------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+.+. + + ++++||+.+.++
T Consensus 177 -~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~ 219 (272)
T 1yb1_A 177 -LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 219 (272)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCC
Confidence 24799999988876543 2 3 789999999765
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=7.2e-12 Score=113.82 Aligned_cols=142 Identities=11% Similarity=0.041 Sum_probs=89.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCCCC--Cch----hhhcc--CeeeecCC----ccccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTAD--HHD----ELINM--GITPSLKW----TEATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~~~--~~~----~l~~~--~v~~d~~d----~~~~~~~D 144 (267)
|||+|||+ ||||++++..|+++ |+ +|+.+++.+. +.. ++... .+..++.+ .+++.++|
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~--g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCC
Confidence 78999996 99999999999998 86 8999998641 111 12111 11123322 24678999
Q ss_pred EEEEccCCCCC-CC--------hHHHHHHHHHH--hCC-CC-cEEEEcCCc-cccCCCCCccCCCC-CCCCCCCCHHHHH
Q 024494 145 YVIFCAPPSRS-LD--------YPGDVRLAALS--WNG-EG-SFLFTSSSA-IYDCSDNGACDEDS-PVVPIGRSPRTDV 209 (267)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~~~~~l~~~--~~~-v~-r~V~~SS~~-VYg~~~~~~~~E~~-p~~p~~~~~y~~~ 209 (267)
+|||+|+.... .. ++..+++++.+ ..+ ++ ++|+.|+.. +.. ....|.. +..|. +.|+.+
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~----~~~~~~~~~~~p~--~~yg~t 156 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA----LIAYKNAPGLNPR--NFTAMT 156 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH----HHHHHTCTTSCGG--GEEECC
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH----HHHHHHcCCCChh--heeccc
Confidence 99999996542 11 23334444432 223 44 777777643 111 0111222 23332 468889
Q ss_pred HHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
|+++|+++..+ + .+++|+.++||+.
T Consensus 157 kl~~er~~~~~a~~~g~~~~~vr~~~V~G~h 187 (327)
T 1y7t_A 157 RLDHNRAKAQLAKKTGTGVDRIRRMTVWGNH 187 (327)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEECCEEEBCS
T ss_pred hHHHHHHHHHHHHHhCcChhheeeeEEEcCC
Confidence 99999876543 3 7999999999997
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.3e-10 Score=99.70 Aligned_cols=136 Identities=13% Similarity=-0.010 Sum_probs=89.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cCeee---ecCCc--------cccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITP---SLKWT--------EATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~v~~---d~~d~--------~~~~~~D~Vi~ 148 (267)
|+++||||+ |.||++++++|+++ |++|++++|++++.+.+.. .+.+. +..+. +...++|+|||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEE
Confidence 578999996 99999999999999 9999999998766543321 11111 21111 12358999999
Q ss_pred ccCCC-CCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 149 CAPPS-RSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 149 ~a~~~-~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
+|+.. .... +.. +...+. +...+.+++|++||...|... + + ...|
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~--~~~Y 145 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW---------K--E--LSTY 145 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC---------T--T--CHHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC---------C--C--chHH
Confidence 99965 3211 111 111111 112356899999998776421 1 1 2479
Q ss_pred HHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.+|.+.|.+.+.+ + +.+++|+.++|+.
T Consensus 146 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~ 182 (254)
T 1zmt_A 146 TSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 182 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccc
Confidence 99999988776542 3 8899999998775
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=4.4e-10 Score=97.68 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=91.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++.. .. +..|+.|++ ...++|+
T Consensus 12 ~k~vlVTGasggiG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 12 GLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 378999996 99999999999999 9999999999876544321 12 234555541 1238999
Q ss_pred EEEccCCCCCC-----------C---hHH-------HHHHHH---H---HhC------CCCcEEEEcCCccccCCCCCcc
Q 024494 146 VIFCAPPSRSL-----------D---YPG-------DVRLAA---L---SWN------GEGSFLFTSSSAIYDCSDNGAC 192 (267)
Q Consensus 146 Vi~~a~~~~~~-----------~---~~~-------~~~~l~---~---~~~------~v~r~V~~SS~~VYg~~~~~~~ 192 (267)
|||+|+..... . +.. +..+++ . ... +.+++|++||...|....
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---- 165 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---- 165 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT----
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC----
Confidence 99999864321 1 111 111111 1 111 457899999998775321
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 193 ~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +.+++|+.+.++.
T Consensus 166 -------~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 207 (265)
T 2o23_A 166 -------G--QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 207 (265)
T ss_dssp -------T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred -------C--CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcc
Confidence 1 247999999888766542 3 7899999998875
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=3e-10 Score=98.19 Aligned_cols=137 Identities=12% Similarity=0.041 Sum_probs=87.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cCee---eecCCc-------cccCCCCEEEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGIT---PSLKWT-------EATQKFPYVIF 148 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~v~---~d~~d~-------~~~~~~D~Vi~ 148 (267)
..++|||||+ |.||++++++|+++ |++|++++|+.++...+.+ ..+. .|+.|. +...++|+|||
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~ 90 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKL--GSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVC 90 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3488999996 99999999999999 9999999998766544321 1222 344443 12357999999
Q ss_pred ccCCCCCC--------ChHHH-------HHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSL--------DYPGD-------VRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~--------~~~~~-------~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+|+..... ++... ...+. + ...+.++||++||...|.... + ...|+
T Consensus 91 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~ 157 (249)
T 3f9i_A 91 NAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNP-----------G--QANYC 157 (249)
T ss_dssp CCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCS-----------C--SHHHH
T ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCC-----------C--CchhH
Confidence 99964321 11111 11111 1 123567999999988764321 1 34799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+|.+.|.+.+.+ + +.+++|+.+.++.
T Consensus 158 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 193 (249)
T 3f9i_A 158 ASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM 193 (249)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC---
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCc
Confidence 9999888776543 3 7889999999875
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=99.62 Aligned_cols=136 Identities=12% Similarity=0.078 Sum_probs=90.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++.+.+. ..+ +..|+.|++ ...+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 367999996 99999999999999 999999999875543321 112 234665541 2348
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+...... +.. +...+. . ...+ .+++|++||...+... |
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~ 147 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------P 147 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------T
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC------------C
Confidence 999999998643211 111 111111 1 1224 5799999998755321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 148 ~-~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 189 (256)
T 1geg_A 148 E-LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM 189 (256)
T ss_dssp T-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred C-chhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccch
Confidence 1 247999999888776543 3 7899999999875
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.14 E-value=3e-10 Score=99.33 Aligned_cols=135 Identities=11% Similarity=0.056 Sum_probs=90.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------ccCCCCEEEEcc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------ATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~~~~D~Vi~~a 150 (267)
+.+++||||+ |.||++++++|+++ |++|++++|++++.++. ..+..|+.|++ ....+|+|||+|
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~--~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nA 95 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADA--GDKVAITYRSGEPPEGF--LAVKCDITDTEQVEQAYKEIEETHGPVEVLIANA 95 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTS--EEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHhhccc--eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3478999996 99999999999999 99999999987665432 13445666541 235689999999
Q ss_pred CCCCC--------CChHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 151 PPSRS--------LDYPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 151 ~~~~~--------~~~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
+.... .++.+ +...+. +...+.+++|++||...+... |. ...|+.+
T Consensus 96 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------------~~-~~~Y~as 162 (253)
T 2nm0_A 96 GVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS------------AG-QANYAAS 162 (253)
T ss_dssp SCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCH------------HH-HHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCC------------CC-cHHHHHH
Confidence 86432 11211 111111 112356899999998765321 10 2479999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 196 (253)
T 2nm0_A 163 KAGLVGFARSLARELGSRNITFNVVAPGFVDTDM 196 (253)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcc
Confidence 99888776542 2 7889999987764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=100.59 Aligned_cols=135 Identities=16% Similarity=0.117 Sum_probs=88.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------------cCeeeecCCcc-----------c
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------------MGITPSLKWTE-----------A 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------------~~v~~d~~d~~-----------~ 139 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++.+++.. ..+..|+.|++ .
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 367999996 99999999999999 9999999998655432210 01234565541 2
Q ss_pred cCCCCEEEEccCCCCCC---------C---hHH-------HHHHHH---H---HhCCCCcEEEEcCCcc-ccCCCCCccC
Q 024494 140 TQKFPYVIFCAPPSRSL---------D---YPG-------DVRLAA---L---SWNGEGSFLFTSSSAI-YDCSDNGACD 193 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~---------~---~~~-------~~~~l~---~---~~~~v~r~V~~SS~~V-Yg~~~~~~~~ 193 (267)
..++|+|||+|+..... . +.. +..++. . ...+ +++|++||... |...
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~------ 156 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHAT------ 156 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCC------
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCC------
Confidence 34899999999864321 1 110 111111 1 1124 89999999876 5421
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
| + ...|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 157 ---~--~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 199 (278)
T 1spx_A 157 ---P--D--FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGF 199 (278)
T ss_dssp ---T--T--SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC
T ss_pred ---C--C--ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCcc
Confidence 1 1 247999999998876542 3 7899999999885
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.14 E-value=6.3e-11 Score=103.43 Aligned_cols=136 Identities=17% Similarity=0.179 Sum_probs=89.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhh----hccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.++|||||+ |+||++++++|+++ |++|++++| +++..+.+ ...+ +..|+.|++ .+.
T Consensus 21 ~k~vlItGasggiG~~la~~l~~~--G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 21 GKVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 999999999 54433222 1112 334565542 124
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH---HHhC-CCCcEEEEcCCccc-cCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA---LSWN-GEGSFLFTSSSAIY-DCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~~~~-~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~ 201 (267)
++|+|||+|+...... +.. +..++. .... ..++||++||...| ... + +
T Consensus 99 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~---------~--~- 166 (274)
T 1ja9_A 99 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI---------P--N- 166 (274)
T ss_dssp CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC---------C--S-
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC---------C--C-
Confidence 8999999998653211 111 111121 1111 12799999999887 321 1 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+ + ++++||+.++++.
T Consensus 167 -~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~ 207 (274)
T 1ja9_A 167 -HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207 (274)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccc
Confidence 247999999999876653 3 7899999998764
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.5e-10 Score=100.52 Aligned_cols=133 Identities=11% Similarity=0.020 Sum_probs=92.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----------cccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----------~~~~~~D~Vi~~a~~ 152 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+..... ..+..|+.|. +...++|+|||+|+.
T Consensus 29 k~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~--~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~ 104 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAA--GARVAVADRAVAGIAAD--LHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGV 104 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEECSSCCTTSCCS--EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHhh--hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 67999996 99999999999999 99999999987655332 1234555553 123589999999997
Q ss_pred CCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHH
Q 024494 153 SRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (267)
Q Consensus 153 ~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~ 211 (267)
..... +.. +...+. +...+.+++|++||...|... .+ ...|+.+|.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~--~~~Y~asKa 171 (266)
T 3uxy_A 105 ISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPG-----------PG--HALYCLTKA 171 (266)
T ss_dssp CCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCC-----------TT--BHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCC-----------CC--ChHHHHHHH
Confidence 54311 111 111111 122357899999998776321 11 347999999
Q ss_pred HHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 212 KAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 212 ~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.|.+.+.+ + +.+++|+.++++.
T Consensus 172 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 203 (266)
T 3uxy_A 172 ALASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESSBCCHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeCCCcchH
Confidence 998776543 3 7889999999875
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.14 E-value=2.3e-10 Score=101.56 Aligned_cols=147 Identities=13% Similarity=-0.003 Sum_probs=94.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-------ccCCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-------ATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-------~~~~~D~Vi~~ 149 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++...+.. . .+..|+.|++ ...++|+|||+
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n 93 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARR--GATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN 93 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 378999996 99999999999999 9999999998766544322 1 1234555542 23478999999
Q ss_pred cCCCCC------CCh-------HHHHHHHHHHh--CCCCcEEEEcCCccccCCCC-Cc-cCCCCCCCCCCCCHHHHHHHH
Q 024494 150 APPSRS------LDY-------PGDVRLAALSW--NGEGSFLFTSSSAIYDCSDN-GA-CDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 150 a~~~~~------~~~-------~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~-~~-~~E~~p~~p~~~~~y~~~k~~ 212 (267)
|+.... +++ ..+...++... ...+++|++||...|..... .. ..|..+..+ ...|+.+|.+
T Consensus 94 Ag~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~a 171 (291)
T 3rd5_A 94 AGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSP--WLAYSQSKLA 171 (291)
T ss_dssp CCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCH--HHHHHHHHHH
T ss_pred CcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCC--cchHHHHHHH
Confidence 996432 111 11222222221 12469999999988754221 11 122222222 3579999999
Q ss_pred HHHHHHHc-------C----eeEEeeCccccCC
Q 024494 213 AEKVILEF-------G----GCVLRLAGLYISL 234 (267)
Q Consensus 213 aE~~l~~~-------~----~~IlR~~~iyGp~ 234 (267)
.|.+.+.+ + +..++|+.+..+.
T Consensus 172 ~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~ 204 (291)
T 3rd5_A 172 NLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL 204 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccc
Confidence 88765542 2 5778999998765
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=9.9e-10 Score=95.65 Aligned_cols=140 Identities=11% Similarity=-0.021 Sum_probs=91.5
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCC---CeEEEEeCCCCCchhhhcc-----C---eeeecCCcc----cc-----
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELINM-----G---ITPSLKWTE----AT----- 140 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG---~~V~~l~R~~~~~~~l~~~-----~---v~~d~~d~~----~~----- 140 (267)
..|++|||||+ |.||++++++|+++ | ++|++++|+.+..+.+.+. . +..|+.|.+ .+
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~--G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNL--PQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTS--SSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhc--CCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHH
Confidence 34578999996 99999999999999 9 9999999987765433211 2 234555542 11
Q ss_pred --C--CCCEEEEccCCCC-CCC--------hHH-------HHHHHH---H---HhC------C-----CCcEEEEcCCcc
Q 024494 141 --Q--KFPYVIFCAPPSR-SLD--------YPG-------DVRLAA---L---SWN------G-----EGSFLFTSSSAI 183 (267)
Q Consensus 141 --~--~~D~Vi~~a~~~~-~~~--------~~~-------~~~~l~---~---~~~------~-----v~r~V~~SS~~V 183 (267)
. ++|+|||+|+... ... +.. +...++ . ... + .++||++||...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 2 6999999999654 111 111 111111 1 111 1 578999999888
Q ss_pred ccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 184 YDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 184 Yg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|.... +..+ ...|+.+|.+.|.+.+.+ + ++++||+.+..+
T Consensus 177 ~~~~~--------~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 225 (267)
T 1sny_A 177 SIQGN--------TDGG--MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 225 (267)
T ss_dssp CSTTC--------CSCC--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred cccCC--------CCCC--chHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecC
Confidence 75321 1112 347999999998876543 3 789999999654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=6.5e-10 Score=97.29 Aligned_cols=135 Identities=12% Similarity=-0.019 Sum_probs=91.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhc----c---CeeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN----M---GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~----~---~v~~d~~d~~-----------~~~ 141 (267)
+++||||+ |.||++++++|+++ |++|++++|++++... +.. . .+..|+.|++ ...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCcHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 67999996 99999999999999 9999999998654322 111 1 1334666541 234
Q ss_pred CCCEEEEccCCCCCCChHHH-----------HHHHHHH--hCC---CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 142 KFPYVIFCAPPSRSLDYPGD-----------VRLAALS--WNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~~~~~-----------~~~l~~~--~~~---v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
++|+|||+|+.....++.+. .+.++.. ..+ .+++|++||...|.... . ...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~ 152 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVA-----------Q--QPV 152 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------T--CHH
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCC-----------C--Cch
Confidence 68999999997644443221 1122111 112 57999999988775311 1 247
Q ss_pred HHHHHHHHHHHHHH---------cC--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILE---------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~---------~~--~~IlR~~~iyGp~ 234 (267)
|+.+|...|.+.+. .+ +.+++|+.+.++.
T Consensus 153 Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~ 192 (267)
T 2gdz_A 153 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAI 192 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchh
Confidence 99999988876553 23 7889999998764
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.12 E-value=4.2e-10 Score=98.12 Aligned_cols=139 Identities=12% Similarity=0.068 Sum_probs=90.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhh----c-----cCeeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI----N-----MGITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~----~-----~~v~~d~~d~~-----------~~ 140 (267)
+|+++||||+ |.||++++++|+++ |++|++++|+.... +.+. . ..+..|+.|++ ..
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 83 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAK--GYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF 83 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHC--CCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 4678999996 99999999999999 99999998875432 1111 1 11334565541 23
Q ss_pred CCCCEEEEccCC--CCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 QKFPYVIFCAPP--SRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 ~~~D~Vi~~a~~--~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.++|+|||+|+. ..... +.+ +...+. +...+.+++|++||.+.++...
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~--------- 154 (264)
T 3i4f_A 84 GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPG--------- 154 (264)
T ss_dssp SCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCC---------
T ss_pred CCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCC---------
Confidence 489999999994 21111 111 111111 1223568999999987654221
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..+ ...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 155 ~~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (264)
T 3i4f_A 155 WIY--RSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEM 198 (264)
T ss_dssp CTT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGG
T ss_pred CCC--CchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCcc
Confidence 111 357999999988776542 3 7889999999986
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.4e-10 Score=97.19 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=89.7
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----------cccCCCCEEEEc
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------EATQKFPYVIFC 149 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----------~~~~~~D~Vi~~ 149 (267)
.|+++|||||+ |.||++++++|+++ |++|++++|++++... ..+..|+.|. +...++|+|||+
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~---~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~ 94 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSK--SWNTISIDFRENPNAD---HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCA 94 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCTTSS---EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc---cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 34578999996 99999999999999 9999999998765432 2344555553 134578999999
Q ss_pred cCCCCC----CC-----hHH-------HHHHHHHH---h-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 150 APPSRS----LD-----YPG-------DVRLAALS---W-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 150 a~~~~~----~~-----~~~-------~~~~l~~~---~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
|+.... .+ +.+ +...+... . ...+++|++||...+... .+ ...|+.+
T Consensus 95 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~--~~~Y~~s 161 (251)
T 3orf_A 95 AGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT-----------SG--MIAYGAT 161 (251)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TT--BHHHHHH
T ss_pred CccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC-----------CC--CchhHHH
Confidence 996421 11 111 11111111 1 123589999998876321 11 3479999
Q ss_pred HHHHHHHHHHc---------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF---------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~---------~--~~IlR~~~iyGp~ 234 (267)
|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 162 Kaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~ 197 (251)
T 3orf_A 162 KAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT 197 (251)
T ss_dssp HHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc
Confidence 99999876542 2 6889999987653
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=3.9e-10 Score=98.83 Aligned_cols=136 Identities=12% Similarity=0.056 Sum_probs=91.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh--------ccC---eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI--------NMG---ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~--------~~~---v~~d~~d~~-----------~~ 140 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++. ... +..|+.|++ ..
T Consensus 13 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 13 DRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 378999996 99999999999999 999999999876543221 111 234565541 23
Q ss_pred CCCCEEEEccCCCCC-CC--------hHHH-----------HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS-LD--------YPGD-----------VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~~--------~~~~-----------~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.++|+|||+|+.... .. +... ++.++ +...+.+++|++||...+... +
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~- 160 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI---------G- 160 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC---------S-
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC---------C-
Confidence 479999999986532 11 1111 11111 122357899999998765321 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 161 -~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 202 (267)
T 1iy8_A 161 -N--QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 202 (267)
T ss_dssp -S--BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred -C--CccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc
Confidence 1 247999999988776532 3 7899999998874
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=4.6e-10 Score=98.33 Aligned_cols=136 Identities=14% Similarity=0.059 Sum_probs=91.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hcc---C---eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INM---G---ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~---~---v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+.. ... . +..|+.|++ ...+
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARA--GANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 78999996 99999999999999 99999999987654332 111 1 334665541 2348
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.+ +...+. +...+.+++|++||...+-. +. |
T Consensus 89 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~----------~~-~- 156 (262)
T 3pk0_A 89 IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPIT----------GY-P- 156 (262)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTB----------CC-T-
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccC----------CC-C-
Confidence 99999999965321 1 111 111111 11236789999999764311 00 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
....|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 157 ~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 198 (262)
T 3pk0_A 157 GWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198 (262)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcc
Confidence 1357999999998776543 3 7889999999885
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=7.6e-10 Score=96.58 Aligned_cols=135 Identities=12% Similarity=0.048 Sum_probs=90.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhc-------cC---eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELIN-------MG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~-------~~---v~~d~~d~~-----------~~~ 141 (267)
+++||||+ |.||++++++|+++ |++|++++|+++. ...+.. .. +..|+.|++ ...
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 67999996 99999999999999 9999999998765 332211 12 234555541 234
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+...... +.. +...+. +...+.+++|++||...+... + +
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~ 151 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS---------A--N 151 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC---------T--T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC---------C--C
Confidence 7999999999653211 111 111111 112356899999998876421 1 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +.+++|+.++++.
T Consensus 152 --~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T 1x1t_A 152 --KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred --CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCch
Confidence 247999999998776542 3 7889999999885
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=3.7e-10 Score=99.51 Aligned_cols=135 Identities=10% Similarity=0.085 Sum_probs=90.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCeeeecCCcc-----------ccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~~d~~d~~-----------~~~~~D~V 146 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++....+.. ..+..|+.|++ ...++|+|
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 378999996 99999999999999 9999999998765443321 12344665541 23479999
Q ss_pred EEccCCCCC-C---C-----hHH-------HHHHHH---HH--hCCCCcEEEEcCCccc-cCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSRS-L---D-----YPG-------DVRLAA---LS--WNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~~-~---~-----~~~-------~~~~l~---~~--~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~~~~ 204 (267)
||+|+.... . + +.. +..++. .. ....+++|++||...+ +.+ . ..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~--~~ 152 (270)
T 1yde_A 87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQA------------Q--AV 152 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCT------------T--CH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCC------------C--Cc
Confidence 999986432 1 0 111 111111 11 1125899999997644 321 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...|.+.+.+ + +.++||+.++++.
T Consensus 153 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~ 191 (270)
T 1yde_A 153 PYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL 191 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccch
Confidence 7999999998776542 3 7899999999874
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-09 Score=96.61 Aligned_cols=137 Identities=14% Similarity=0.123 Sum_probs=90.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hh----hhccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DE----LINMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~----l~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+.. +. +...+ +..|+.|.+ ...
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 99999999986431 11 22112 234555531 235
Q ss_pred CCCEEEEccCCCCCCC--------hH-------HHHHHHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YP-------GDVRLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
++|+|||+|+...... +. .+..++. ... .+.+++|++||...+.... + .
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~-~ 174 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV-----------P-K 174 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-----------S-S
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC-----------C-C
Confidence 7999999999654321 11 1111111 111 2467999999977653210 1 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 175 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 215 (283)
T 1g0o_A 175 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 215 (283)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHH
T ss_pred CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchh
Confidence 247999999998776542 3 7889999998874
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.10 E-value=2.1e-10 Score=99.40 Aligned_cols=133 Identities=14% Similarity=0.159 Sum_probs=77.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+....+.. . .+..|+.|++ ...+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALARE--GAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 478999996 99999999999999 9999999998765443321 1 1334565541 2348
Q ss_pred CCEEEEccCCCCC-------C-C---hH-------HH----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRS-------L-D---YP-------GD----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-------~-~---~~-------~~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+|+|||+|+.... . + +. .+ ++.++ +...+.+++|++||...|..
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 154 (253)
T 3qiv_A 87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLY------------ 154 (253)
T ss_dssp CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCC------------
Confidence 9999999986311 0 1 11 11 11111 12235679999999987721
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 155 ----~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 195 (253)
T 3qiv_A 155 ----SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEA 195 (253)
T ss_dssp ---------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccc
Confidence 125778888887765542 2 7889999999986
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.10 E-value=5.3e-10 Score=99.01 Aligned_cols=136 Identities=14% Similarity=0.159 Sum_probs=92.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++...++.. ..+..|+.|++ ...++|+
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKN--GAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 378999996 99999999999999 9999999998765543321 12345666541 2348999
Q ss_pred EEEccCCCCCC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+..... + +.. +...+. . ...+.+++|++||...|.... + ..
T Consensus 105 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~ 171 (277)
T 4dqx_A 105 LVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIA-----------D--RT 171 (277)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCT-----------T--BH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCC-----------C--Ch
Confidence 99999965321 1 111 111111 1 123457999999988764211 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 172 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 210 (277)
T 4dqx_A 172 AYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPY 210 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCch
Confidence 7999999998776543 3 7889999998764
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.10 E-value=6.6e-10 Score=97.63 Aligned_cols=137 Identities=13% Similarity=0.086 Sum_probs=91.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cC---eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MG---ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~---v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+++..+.+.. .. +..|+.|++ ....+
T Consensus 35 k~vlITGasggIG~~la~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 112 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQA--GADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI 112 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHH--TCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 68999996 99999999999999 9999999998766443221 11 234555541 12469
Q ss_pred CEEEEccCCCCC------CChHH-----------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRS------LDYPG-----------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~------~~~~~-----------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
|+|||+|+.... ..-.+ + .+.++ +...+.++||++||...+... +..+
T Consensus 113 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~---------~~~~ 183 (279)
T 3ctm_A 113 DVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVN---------IPQL 183 (279)
T ss_dssp SEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC------------CC
T ss_pred CEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCC---------CCCC
Confidence 999999985432 11011 1 11221 122367899999998765321 0111
Q ss_pred CCCCHHHHHHHHHHHHHHHcC--------eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEFG--------GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~~--------~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+++.+. +.+++|+.+..+.
T Consensus 184 --~~~Y~~sK~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~ 223 (279)
T 3ctm_A 184 --QAPYNTAKAACTHLAKSLAIEWAPFARVNTISPGYIDTDI 223 (279)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTT
T ss_pred --cccHHHHHHHHHHHHHHHHHHhcccCCEEEEeccCCcccc
Confidence 3479999999998876531 6889999998874
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=8.8e-10 Score=95.63 Aligned_cols=135 Identities=15% Similarity=0.051 Sum_probs=89.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|.++ |++|++++|++++.+.+. ..+ +..|+.|++ ...+
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAE--GAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 999999999866543321 112 234565541 2358
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.. +...+. +...+ +++|++||...+... |.
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------------~~ 151 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV------------RN 151 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC------------TT
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC------------CC
Confidence 99999999964321 1 111 111111 11224 899999998765321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+.. + +.+++|+.+..+.
T Consensus 152 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 192 (247)
T 2jah_A 152 -AAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192 (247)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSG
T ss_pred -CcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcc
Confidence 247999998887665432 3 7899999998874
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.6e-10 Score=100.61 Aligned_cols=136 Identities=10% Similarity=0.068 Sum_probs=90.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-----CeeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-----~v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+..+++. .. .+..|+.|++ ...+
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARR--GAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 367999996 99999999999999 999999999876543321 11 1334665541 2358
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.. +...+. . ...+.+++|++||...+.... .
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 173 (270)
T 3ftp_A 106 LNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNP-----------G- 173 (270)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T-
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------C-
Confidence 99999999965321 1 111 111111 1 123567899999987664211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 174 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (270)
T 3ftp_A 174 -QVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDM 214 (270)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred -chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcc
Confidence 247999999888765542 3 7889999998774
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.6e-09 Score=95.80 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=91.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+..+.+.. . .+..|+.|++ ...++
T Consensus 33 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEA--GAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 78999996 99999999999999 9999999998776544321 1 1344666541 23489
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+...... +.. +...+. +...+ ..++|++||...+.... +.
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~-----------~~ 179 (276)
T 3r1i_A 111 DIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI-----------PQ 179 (276)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-----------SS
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-----------CC
Confidence 99999999754321 111 111111 11123 37899999977653211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
....|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 180 ~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 221 (276)
T 3r1i_A 180 QVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 1357999999998876543 3 7889999999886
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.09 E-value=1.2e-09 Score=95.32 Aligned_cols=136 Identities=11% Similarity=0.103 Sum_probs=91.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|.++ |++|++++|++++.+++.. .+ +..|+.|++ ...+
T Consensus 6 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 6 EKVVIITGGSSGMGKGMATRFAKE--GARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 9999999998765543321 11 334665541 2358
Q ss_pred CCEEEEccCCCCCCC--------hH-------HHHHHHH-------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YP-------GDVRLAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~-------~~~~~l~-------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+...... +. .+...+. ....+.+++|++||...+.... .
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 152 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGP-----------G 152 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCT-----------T
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCC-----------C
Confidence 999999999643211 11 1111111 1223468999999987664211 1
Q ss_pred CCCCHHHHHHHHHHHHHHH--------cC--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILE--------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~--------~~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+. .+ +..++|+.++++.
T Consensus 153 --~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~ 194 (257)
T 3imf_A 153 --VIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTG 194 (257)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCC
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCc
Confidence 24799999888765432 24 7889999999885
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.09 E-value=5.5e-10 Score=96.43 Aligned_cols=136 Identities=11% Similarity=0.060 Sum_probs=91.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++....+. ..+ +..|+.|++ ...+
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASK--GATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 999999999876544322 112 234555541 2347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +.. +..++. +...+.+++|++||...+...+ .
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 150 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNP-----------G- 150 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCT-----------T-
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCC-----------C-
Confidence 899999999754321 111 111111 1123557999999987764311 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 151 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 191 (247)
T 3lyl_A 151 -QTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDM 191 (247)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEeccc
Confidence 357999999888776543 3 7889999999876
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.09 E-value=8.4e-10 Score=96.18 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=90.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhh----ccC-----eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELI----NMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~----~~~-----v~~d~~d~~-----------~~~ 141 (267)
+++||||+ |.||++++++|+++ |++|++++|+++. ..++. ..+ +..|+.|++ ...
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAAD--GFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG 80 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 67999996 99999999999999 9999999998765 33221 111 234565541 234
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCC-CcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
++|+|||+|+...... +.+ +...+. . ...+. +++|++||...+... |
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~-- 149 (258)
T 3a28_C 81 GFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGF---------P-- 149 (258)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCC---------T--
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCC---------C--
Confidence 8999999999653221 111 111111 1 12255 899999998766421 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|...|.+.+.+ + +.+++|+.+..+.
T Consensus 150 ~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 191 (258)
T 3a28_C 150 I--LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191 (258)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHH
T ss_pred C--chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChh
Confidence 1 247999999998776543 3 7889999997764
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=6.9e-10 Score=96.56 Aligned_cols=133 Identities=10% Similarity=0.009 Sum_probs=89.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~V 146 (267)
|++||||+ |.||++++++|+++ |++|++++|++++.+.+.. .. +..|+.|++ ...++|+|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQ--GHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 57899996 99999999999999 9999999998765443321 12 334665541 23479999
Q ss_pred EEccCCCC-CC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSR-SL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~-~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
||+|+... .. + +.. +...+. . ...+.+++|++||...+... .+ ..
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~--~~ 145 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPY-----------AG--GN 145 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-----------TT--CH
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCC-----------CC--Cc
Confidence 99999642 11 1 111 111111 1 12356899999998765321 11 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCcccc
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYI 232 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyG 232 (267)
.|+.+|...|.+.+.. + +..++|+.+.|
T Consensus 146 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 146 VYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccccc
Confidence 7999999998876542 3 78899999995
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.08 E-value=9.7e-10 Score=96.10 Aligned_cols=135 Identities=10% Similarity=0.048 Sum_probs=88.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+.++...+. ..+ +..|+.|++ ....+
T Consensus 30 k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 107 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSL--GARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC 107 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 68999996 99999999999999 999999999876544332 112 234555541 23579
Q ss_pred CEEEEccCCCC-CC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSR-SL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~-~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+... .. + +.+ +...+. +...+.++||++||...+... .+
T Consensus 108 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~- 175 (262)
T 3rkr_A 108 DVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPV-----------AD- 175 (262)
T ss_dssp SEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCC-----------TT-
T ss_pred CEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCC-----------CC-
Confidence 99999999732 11 1 111 111111 122457899999998876321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 176 -~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~ 216 (262)
T 3rkr_A 176 -GAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEF 216 (262)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCc
Confidence 357999999888776542 3 7889999987664
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=4e-10 Score=97.63 Aligned_cols=135 Identities=13% Similarity=0.069 Sum_probs=89.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|+. +..+.+ ...+ +..|+.|.+ ...+
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEE--GYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 99999988854 322221 1112 334665541 2348
Q ss_pred CCEEEEccCCCCCC---C-----hHH-------HHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPG-------DVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+..... + +.. +..++.. ...+.+++|++||...+...+ +
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 150 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNP-----------G- 150 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T-
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----------C-
Confidence 99999999965321 1 111 1111111 223567999999987664211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 151 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 191 (246)
T 3osu_A 151 -QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM 191 (246)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred -ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCc
Confidence 347999999888776543 3 7889999999986
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.4e-10 Score=99.00 Aligned_cols=135 Identities=16% Similarity=0.096 Sum_probs=91.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|+++ |++|++++|+++...++.. . .+..|+.|++ ...++|+|
T Consensus 30 k~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67999996 99999999999999 9999999998765543321 1 2344666541 23589999
Q ss_pred EEccCCCCCC---C-----hH-------HHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSL---D-----YP-------GDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~---~-----~~-------~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+..... + +. .+...+. +...+.+++|++||...+... .+ ...
T Consensus 108 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~-----------~~--~~~ 174 (277)
T 3gvc_A 108 VANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAV-----------GG--TGA 174 (277)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-----------TT--BHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC-----------CC--chh
Confidence 9999975321 1 11 1111111 122356789999998765321 11 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.|.+.+.. + +.+++|+.++++.
T Consensus 175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 212 (277)
T 3gvc_A 175 YGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPM 212 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCch
Confidence 999999998776532 3 7889999999874
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.7e-09 Score=94.81 Aligned_cols=135 Identities=16% Similarity=0.091 Sum_probs=90.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-hhhccC---eeeecCCcc-----------ccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-ELINMG---ITPSLKWTE-----------ATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-~l~~~~---v~~d~~d~~-----------~~~~~D~Vi~ 148 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.. .+...+ +..|+.|++ ...++|+|||
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~ 105 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEH--GHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH 105 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 67999996 99999999999999 999999999876532 222223 334565541 2357999999
Q ss_pred ccCCCCCC--C-hHHH-----------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 149 CAPPSRSL--D-YPGD-----------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 149 ~a~~~~~~--~-~~~~-----------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
+|+..... + ..+. ...+. +...+.+++|++||...+.... + ...|+.
T Consensus 106 nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~a 172 (260)
T 3gem_A 106 NASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSS-----------K--HIAYCA 172 (260)
T ss_dssp CCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCS-----------S--CHHHHH
T ss_pred CCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCC-----------C--cHhHHH
Confidence 99964321 1 1111 11111 1223568999999988764211 1 247999
Q ss_pred HHHHHHHHHHHc----C----eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF----G----GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~----~----~~IlR~~~iyGp~ 234 (267)
+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 173 sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~ 206 (260)
T 3gem_A 173 TKAGLESLTLSFAARFAPLVKVNGIAPALLMFQP 206 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC--
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEeecccccCC
Confidence 999998776543 2 6889999998875
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-09 Score=96.68 Aligned_cols=136 Identities=13% Similarity=0.028 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC---------chh-------hhccC-----eeeecCCcc---
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH---------HDE-------LINMG-----ITPSLKWTE--- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~---------~~~-------l~~~~-----v~~d~~d~~--- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|++.. .+. +...+ +..|+.|++
T Consensus 10 ~k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 87 (281)
T 3s55_A 10 GKTALITGGARGMGRSHAVALAEA--GADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE 87 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 378999996 99999999999999 9999999997432 111 11111 234565541
Q ss_pred --------ccCCCCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCC
Q 024494 139 --------ATQKFPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDN 189 (267)
Q Consensus 139 --------~~~~~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~ 189 (267)
...++|++||+|+..... + +.+ +...+. +...+.+++|++||...+....
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~- 166 (281)
T 3s55_A 88 SFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF- 166 (281)
T ss_dssp HHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT-
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC-
Confidence 235899999999965421 1 111 111111 1123567999999988764211
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 190 ~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 167 ----------~--~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 208 (281)
T 3s55_A 167 ----------A--QASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPM 208 (281)
T ss_dssp ----------T--CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTT
T ss_pred ----------C--CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 1 247999999988776542 3 7889999999986
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.6e-09 Score=92.61 Aligned_cols=136 Identities=13% Similarity=0.060 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--C---eeeecCCcc--------ccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G---ITPSLKWTE--------ATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~---v~~d~~d~~--------~~~~~D~Vi~ 148 (267)
|+++||||+ |.||++++++|+++ |++|++++|++++..++.. . . +..|+.|.+ .....|+|||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAE--GKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 578999996 99999999999999 9999999998766544332 1 1 234555541 2234499999
Q ss_pred ccCCCCCCC--------hHH-------HHHHHHH---H-h-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 149 CAPPSRSLD--------YPG-------DVRLAAL---S-W-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 149 ~a~~~~~~~--------~~~-------~~~~l~~---~-~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
+|+...... +.+ +...+.. . . ....++|++||...+.... . ...|+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~--~~~Y~a 145 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKA-----------Q--ESTYCA 145 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCT-----------T--CHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCC-----------C--CchhHH
Confidence 999654221 111 1111111 1 1 1223999999988764211 1 247999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 146 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 180 (230)
T 3guy_A 146 VKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEF 180 (230)
T ss_dssp HHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChH
Confidence 999998776543 2 6889999987764
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.07 E-value=2.7e-10 Score=100.41 Aligned_cols=147 Identities=14% Similarity=0.070 Sum_probs=91.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC------------chh----hhccC-----eeeecCCcc---
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH------------HDE----LINMG-----ITPSLKWTE--- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~------------~~~----l~~~~-----v~~d~~d~~--- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|+... ... +...+ +..|+.|++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEE--GADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence 378999996 99999999999999 9999999987321 111 11111 234565541
Q ss_pred --------ccCCCCEEEEccCCCCCC------ChHHH-------HHHHHHHh----CCCCcEEEEcCCccccCCCCCccC
Q 024494 139 --------ATQKFPYVIFCAPPSRSL------DYPGD-------VRLAALSW----NGEGSFLFTSSSAIYDCSDNGACD 193 (267)
Q Consensus 139 --------~~~~~D~Vi~~a~~~~~~------~~~~~-------~~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~ 193 (267)
...++|+|||+|+..... ++... ..++.... .+..++|++||...+......+..
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~ 167 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGA 167 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccc
Confidence 234899999999965321 11111 11221111 235689999998877543222333
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|..+..+ ...|+.+|...|.+.+.+ + +..++|+.++.+.
T Consensus 168 ~~~~~~~--~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (287)
T 3pxx_A 168 GGPQGPG--GAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDM 215 (287)
T ss_dssp ---CHHH--HHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTT
T ss_pred cccCCCc--cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 3332222 247999999998776543 3 7889999999886
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.07 E-value=8.7e-10 Score=96.25 Aligned_cols=136 Identities=12% Similarity=0.142 Sum_probs=92.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+..+.+. ..+ +..|+.|++ ...+
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 378999996 99999999999999 999999999876543322 111 334665541 2358
Q ss_pred CCEEEEccCCCCCC--C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL--D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~--~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+|+|||+|+..... + +.. +...+. +...+.+++|++||...+.... +
T Consensus 90 id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~-- 156 (256)
T 3gaf_A 90 ITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV-----------R-- 156 (256)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCT-----------T--
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCC-----------C--
Confidence 99999999965321 1 111 111111 1223567999999988764211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.+..+.
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 197 (256)
T 3gaf_A 157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA 197 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCch
Confidence 347999999998776543 3 7889999998875
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.5e-10 Score=96.69 Aligned_cols=135 Identities=10% Similarity=0.101 Sum_probs=89.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++| ++++.+++ ...+ +..|+.|++ ...+
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQ--GANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 68999996 99999999999999 999999999 55443222 1111 234565541 2347
Q ss_pred CCEEEEccCCCCCCC--------hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +.. + ++.++ +...+.+++|++||...+... | .
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~- 150 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN---------P--G- 150 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---------T--T-
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC---------C--C-
Confidence 999999999653211 111 1 11111 112356899999998765321 1 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.. + +.+++|+.+..+.
T Consensus 151 -~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 191 (246)
T 2uvd_A 151 -QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM 191 (246)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGC
T ss_pred -CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcc
Confidence 247999999888765432 3 7899999998875
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.05 E-value=1.9e-09 Score=93.79 Aligned_cols=135 Identities=13% Similarity=0.115 Sum_probs=87.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|.++ |++|++++|+++..++... . .+..|+.|++ ...++|+|
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQE--GATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67999996 99999999999999 9999999998776543321 1 1234565541 23489999
Q ss_pred EEccCCCCCC-------C-----hHH-------HHHHHH---HH---h------CCCCcEEEEcCCccccCCCCCccCCC
Q 024494 147 IFCAPPSRSL-------D-----YPG-------DVRLAA---LS---W------NGEGSFLFTSSSAIYDCSDNGACDED 195 (267)
Q Consensus 147 i~~a~~~~~~-------~-----~~~-------~~~~l~---~~---~------~~v~r~V~~SS~~VYg~~~~~~~~E~ 195 (267)
||+|+..... + +.+ +...+. .. . .+.+++|++||...+....
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~------- 158 (257)
T 3tpc_A 86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQI------- 158 (257)
T ss_dssp EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT-------
T ss_pred EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCC-------
Confidence 9999965321 0 111 111111 11 1 1346899999988774321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 159 ----~--~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 200 (257)
T 3tpc_A 159 ----G--QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPM 200 (257)
T ss_dssp ----T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-
T ss_pred ----C--CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChh
Confidence 1 247999999888775432 3 7889999999886
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.05 E-value=6e-10 Score=98.08 Aligned_cols=136 Identities=10% Similarity=0.067 Sum_probs=87.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--C---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~---v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++..++.. . . +..|+.|++ ...++|+
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQ--GAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999996 99999999999999 9999999998765544321 1 1 334565541 2358999
Q ss_pred EEEccCCCCCC---C-----hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSL---D-----YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|||+|+..... + +.+ + ++.++ +...+.+++|++||...+.... + ..
T Consensus 105 lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-----------~--~~ 171 (266)
T 3grp_A 105 LVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNP-----------G--QT 171 (266)
T ss_dssp EEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------------------C--HH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCC-----------C--ch
Confidence 99999965421 1 111 1 11111 1123567999999987653211 1 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 172 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~ 210 (266)
T 3grp_A 172 NYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM 210 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCch
Confidence 7999999888765542 3 7889999998874
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.05 E-value=3.1e-10 Score=99.70 Aligned_cols=135 Identities=16% Similarity=0.111 Sum_probs=89.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|.++ |++|++++|++++.+++.+ .. +..|+.|++ ...++|+
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 378999996 99999999999999 9999999998765443321 12 234565541 2347899
Q ss_pred EEEccCCCCCCC--------hH-------HHHHHHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 146 VIFCAPPSRSLD--------YP-------GDVRLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~-------~~~~~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
|||+|+...... +. .+...+. ... ...+++|++||...|+.+ . ...|
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------------~--~~~Y 149 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAF------------G--LAHY 149 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHH------------H--HHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCCC------------C--cHHH
Confidence 999998643211 11 1111111 111 124799999999887211 1 2368
Q ss_pred HHHHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
+.+|...|.+.+. + + +.++||+.++++.
T Consensus 150 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 186 (263)
T 2a4k_A 150 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM 186 (263)
T ss_dssp HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGG
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCch
Confidence 8888877765543 2 3 7899999999875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.9e-09 Score=95.10 Aligned_cols=136 Identities=16% Similarity=0.090 Sum_probs=89.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-------------CCchhh----hccC-----eeeecCCcc--
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-------------DHHDEL----INMG-----ITPSLKWTE-- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-------------~~~~~l----~~~~-----v~~d~~d~~-- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|+. ++.+++ ...+ +..|+.|++
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAE--GADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 367999996 99999999999999 99999999842 211111 1111 234555541
Q ss_pred ---------ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCC-CCcEEEEcCCccccCC
Q 024494 139 ---------ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCS 187 (267)
Q Consensus 139 ---------~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~-v~r~V~~SS~~VYg~~ 187 (267)
...++|+|||+|+...... +.+ +...+. +...+ .+++|++||...+...
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence 2358999999999754221 111 111111 11123 5789999998876421
Q ss_pred CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. . ...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 173 ~-----------~--~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 215 (280)
T 3pgx_A 173 P-----------G--NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPM 215 (280)
T ss_dssp T-----------T--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred C-----------C--chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcc
Confidence 1 1 247999999988765542 3 7889999999987
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=9.5e-10 Score=96.22 Aligned_cols=135 Identities=12% Similarity=0.033 Sum_probs=88.6
Q ss_pred CeEEEEc-c--cHHhHHHHHHHHhcCCCCeEEEEeCCCCC---chhhhc-----cCeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADH---HDELIN-----MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~G-a--G~IG~~La~~L~~~~pG~~V~~l~R~~~~---~~~l~~-----~~v~~d~~d~~-----------~~~~ 142 (267)
+++|||| + |.||++++++|+++ |++|++++|++.. ..++.. ..+..|+.|++ ...+
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHC--CCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5799998 4 79999999999999 9999999998721 112211 12345666541 2347
Q ss_pred CCEEEEccCCCCC----CChH-----HH-----------HHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRS----LDYP-----GD-----------VRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~~~~-----~~-----------~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+|+|||+|+.... ..+. +. ..++..... ..+++|++||...|... |
T Consensus 88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------~- 157 (265)
T 1qsg_A 88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---------P- 157 (265)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------T-
T ss_pred CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC---------C-
Confidence 8999999996531 1111 11 111211111 13589999998766321 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +.++||+.++++.
T Consensus 158 -~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 199 (265)
T 1qsg_A 158 -N--YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 199 (265)
T ss_dssp -T--TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred -C--chHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccch
Confidence 1 347999999999876543 3 7889999999985
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.3e-09 Score=94.46 Aligned_cols=136 Identities=10% Similarity=0.005 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEEeCCCCC--chhhhcc----C---eeeecCCc-c-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADH--HDELINM----G---ITPSLKWT-E-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l~R~~~~--~~~l~~~----~---v~~d~~d~-~-----------~~ 140 (267)
.++++|||+ |.||++++++|+++ |++ |++++|+++. ..++... . +..|+.|+ + ..
T Consensus 5 ~k~vlVtGas~gIG~~~a~~l~~~--G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 5 NKNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 378999996 99999999999999 997 9999998642 2222211 1 23456554 2 12
Q ss_pred CCCCEEEEccCCCCCCChHHH-------HHHHH---HH---hCC---CCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLDYPGD-------VRLAA---LS---WNG---EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~~~~~-------~~~l~---~~---~~~---v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
.++|+|||+|+.....++.+. ..++. .. ..+ .+++|++||...|.... . ..
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~ 149 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIH-----------Q--VP 149 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCT-----------T--SH
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCC-----------C--ch
Confidence 479999999997544432221 11211 11 111 46899999988774311 1 24
Q ss_pred HHHHHHHHHHHHHHH-------cC--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILE-------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~-------~~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+. .+ +.+++|+.+.++.
T Consensus 150 ~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~ 188 (254)
T 1sby_A 150 VYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCcc
Confidence 799999999877654 24 7889999998874
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.04 E-value=2e-09 Score=93.94 Aligned_cols=136 Identities=13% Similarity=0.051 Sum_probs=89.4
Q ss_pred CCeEEEEcc-cH-HhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc---C---eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM---G---ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~-IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~---~---v~~d~~d~~-----------~~ 140 (267)
.+++||||+ |. ||++++++|+++ |++|++++|+.++..+.. .. . +..|+.|++ ..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 478999997 86 999999999999 999999999876543321 11 1 234555541 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhC-CCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWN-GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.+.|+|||+|+...... +.. +..++. . ... +.+++|++||...+...
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------- 168 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ----------- 168 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC-----------
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC-----------
Confidence 57899999999654321 111 111111 1 112 45689999998765321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 169 ~~--~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (266)
T 3o38_A 169 HS--QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211 (266)
T ss_dssp TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred CC--CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchh
Confidence 11 357999999998876542 3 7889999998875
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.03 E-value=1.2e-09 Score=94.90 Aligned_cols=135 Identities=10% Similarity=0.082 Sum_probs=91.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|+++ |++|++++|+++..+++.. ..+..|+.|++ ...++|++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAER--GAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999996 99999999999999 9999999998765443321 12345666641 23589999
Q ss_pred EEccCCCCCCC--------hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+...... +.+. ...+. +...+.+++|++||...+.... + ...
T Consensus 88 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----------~--~~~ 154 (248)
T 3op4_A 88 VNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNA-----------G--QAN 154 (248)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T--CHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCC-----------C--ChH
Confidence 99999654321 1111 11111 1123567999999987653211 1 347
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 155 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 192 (248)
T 3op4_A 155 YAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM 192 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCch
Confidence 999999888765542 3 7889999998875
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.2e-09 Score=95.39 Aligned_cols=135 Identities=13% Similarity=0.104 Sum_probs=88.8
Q ss_pred CeEEEEc-c--cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhc-c----CeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-M----GITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~G-a--G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~-~----~v~~d~~d~~-----------~~~~ 142 (267)
+++|||| + |.||++++++|+++ |++|++++|+++ ...++.. . .+..|+.|++ ...+
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 6799998 4 79999999999999 999999999864 1222211 1 1234665541 2347
Q ss_pred CCEEEEccCCCCC----C---C-----hHH-------HHHHHHHHhCC----CCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPG-------DVRLAALSWNG----EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~-------~~~~l~~~~~~----v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
+|+|||+|+.... . + +.. +..++...... .+++|++||...+... +
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------~-- 155 (261)
T 2wyu_A 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---------P-- 155 (261)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---------T--
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC---------C--
Confidence 8999999996431 1 1 111 11122222211 2589999997765321 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 156 ~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 197 (261)
T 2wyu_A 156 K--YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (261)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTG
T ss_pred C--chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCch
Confidence 1 247999999998776543 3 7899999999985
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.9e-09 Score=94.27 Aligned_cols=136 Identities=12% Similarity=0.018 Sum_probs=88.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhh----hc---cC---eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDEL----IN---MG---ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l----~~---~~---v~~d~~d~~-----------~~ 140 (267)
.+++||||+ |.||++++++|+++ |++|++++|+. +....+ .. .. +..|+.|++ ..
T Consensus 25 ~k~~lVTGas~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 25 TKTAVITGSTSGIGLAIARTLAKA--GANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 468999996 99999999999999 99999999943 322221 11 11 234555531 33
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.++|+|||+|+...... +.+ +...+. +...+.+++|++||...+....
T Consensus 103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 171 (281)
T 3v2h_A 103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASP----------- 171 (281)
T ss_dssp SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT-----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCC-----------
Confidence 58999999999754321 111 111111 1223567999999987663211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 172 ~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 213 (281)
T 3v2h_A 172 F--KSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213 (281)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred C--chHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcc
Confidence 1 247999999998776543 3 7889999999886
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.03 E-value=2.5e-09 Score=94.56 Aligned_cols=135 Identities=12% Similarity=0.072 Sum_probs=89.2
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhc-----cCeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-----MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~-----~~v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|+++ ...++.. ..+..|+.|++ ...+
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHRE--GAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67999984 79999999999999 999999999874 1122211 12344665541 2357
Q ss_pred CCEEEEccCCCCC----C---C-----hHH-------HHHHHHHHh-----CCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPG-------DVRLAALSW-----NGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~-------~~~~l~~~~-----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+|+|||+|+.... . + +.. +...+.... ...+++|++||...+... |
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------~- 169 (285)
T 2p91_A 100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---------P- 169 (285)
T ss_dssp CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC---------T-
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC---------C-
Confidence 9999999996531 1 1 111 111221111 123799999997765321 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 170 -~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 211 (285)
T 2p91_A 170 -H--YNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLA 211 (285)
T ss_dssp -T--TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSC
T ss_pred -C--ccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCch
Confidence 1 347999999998776543 3 7899999999985
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-09 Score=95.95 Aligned_cols=135 Identities=16% Similarity=0.072 Sum_probs=88.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cC---eeeecCCc-----------cccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG---ITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~---v~~d~~d~-----------~~~~~~D 144 (267)
+++||||+ |.||++++++|+++ |++|++++|++++.+++.. .. +..|+.|+ +...++|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEA--GWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 67999996 99999999999999 9999999998765443221 02 23455553 1235689
Q ss_pred EEEEccCCCCC-CC--------hHH-------HHHH----HH--HHhCCCC-cEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 145 YVIFCAPPSRS-LD--------YPG-------DVRL----AA--LSWNGEG-SFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 145 ~Vi~~a~~~~~-~~--------~~~-------~~~~----l~--~~~~~v~-r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|||+|+.... .. +.. +... ++ +...+.+ ++|++||...+... |.
T Consensus 100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~------------~~ 167 (272)
T 2nwq_A 100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPY------------PG 167 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCC------------TT
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCC------------CC
Confidence 99999986432 11 111 1111 11 1123556 99999998776321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +.+++|+.+..+.
T Consensus 168 -~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 208 (272)
T 2nwq_A 168 -SHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208 (272)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---
T ss_pred -CchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcc
Confidence 247999999999876543 2 7889999998875
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=7.4e-10 Score=97.25 Aligned_cols=134 Identities=11% Similarity=-0.001 Sum_probs=88.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhhh-------ccC---eeeecCCc----c----------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELI-------NMG---ITPSLKWT----E---------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l~-------~~~---v~~d~~d~----~---------- 138 (267)
+++||||+ |.||++++++|+++ |++|++++| +++...++. ... +..|+.|. +
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 67999996 99999999999999 999999999 655433221 111 23455554 2
Q ss_pred -ccCCCCEEEEccCCCCCC---Ch-H-----------HHHH-----------HHH---HHh--CCC------CcEEEEcC
Q 024494 139 -ATQKFPYVIFCAPPSRSL---DY-P-----------GDVR-----------LAA---LSW--NGE------GSFLFTSS 180 (267)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~---~~-~-----------~~~~-----------~l~---~~~--~~v------~r~V~~SS 180 (267)
...++|+|||+|+..... +. . +... .+. ... .+. +++|++||
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS 169 (276)
T 1mxh_A 90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169 (276)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence 124799999999964321 10 0 1111 111 111 233 79999999
Q ss_pred CccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 181 SAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 181 ~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|... + + ...|+.+|.+.|.+.+.+ + +.+++|+.++++
T Consensus 170 ~~~~~~~---------~--~--~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 170 AMTDLPL---------P--G--FCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp GGGGSCC---------T--T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hhhcCCC---------C--C--CeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 8877421 1 1 247999999998776542 3 789999999998
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-09 Score=99.22 Aligned_cols=135 Identities=14% Similarity=0.186 Sum_probs=86.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhh----cc--C---eeeecCCcc-----------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI----NM--G---ITPSLKWTE----------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~----~~--~---v~~d~~d~~----------- 138 (267)
+++||||+ |.||++++++|+++ |++|++++|+... .+.+. .. . +..|+.|++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~--G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGA--GHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 67999996 99999999999999 9999999987321 11111 11 1 234565541
Q ss_pred ccCCCCEEEEccCCCCCCC--------h-------HHHHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 139 ATQKFPYVIFCAPPSRSLD--------Y-------PGDVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~-------~~~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
...++|+|||+|+...... + +.+...+. +...+.+++|++||...+....
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~--------- 154 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTP--------- 154 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCC---------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCC---------
Confidence 2348999999999653211 1 11111111 1223678999999988764211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
| ....|+.+|.+.|.+.+.+ + +++++|+.+.++
T Consensus 155 --~-~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~ 196 (324)
T 3u9l_A 155 --P-YLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSG 196 (324)
T ss_dssp --S-SCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---
T ss_pred --C-cchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccC
Confidence 1 1247999999998776543 3 789999999755
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.1e-09 Score=94.18 Aligned_cols=136 Identities=12% Similarity=0.072 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+++. ..+ +..|+.|++ ...+
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 368999996 99999999999999 999999999876544322 111 234565541 2458
Q ss_pred CCEEEEccCCCCC-CC--------hHHH-------HHHHHHH-----hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRS-LD--------YPGD-------VRLAALS-----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-~~--------~~~~-------~~~l~~~-----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+|+.... .. +.+. ...+... ....+++|++||...+.... .
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 156 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQA-----------K- 156 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCT-----------T-
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCC-----------c-
Confidence 9999999976321 11 1111 1111110 01137999999987764211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.+ + +..++|+.++++.
T Consensus 157 -~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 197 (264)
T 3ucx_A 157 -YGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197 (264)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccccc
Confidence 247999999988776542 3 7889999999886
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=95.15 Aligned_cols=135 Identities=12% Similarity=0.057 Sum_probs=89.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|+++ +|+.+...++. ..+ +..|+.|++ ...+
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~--G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAEN--GYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 9999987 77765433221 112 234565541 2357
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+|+...... +.. +...+. +...+.+++|++||...+... .+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~-----------~~- 150 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYL-----------EN- 150 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBC-----------TT-
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCC-----------CC-
Confidence 899999998643221 111 111111 122356799999998776421 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 151 -~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 191 (258)
T 3oid_A 151 -YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDA 191 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGG
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChh
Confidence 357999999998876543 3 7889999998875
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.9e-09 Score=96.10 Aligned_cols=135 Identities=12% Similarity=0.067 Sum_probs=86.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c----C---eeeecCCcc-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----G---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~----~---v~~d~~d~~-----------~~~ 141 (267)
++|||||+ |.||++++++|+++ |++|++++|+.++...+.. . . +..|+.|++ ...
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 68999996 99999999999999 9999999998765443211 1 1 234565541 235
Q ss_pred CCCEEEEccCCCCCCC--------hH-------HHHHHHH-------HHh-----CCCCcEEEEcCCccccCCCCCccCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YP-------GDVRLAA-------LSW-----NGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~-------~~~-----~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
++|+|||+|+...... +. .+..+++ .+. .+.++||++||...+...+
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~------ 160 (319)
T 3ioy_A 87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG------ 160 (319)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC------
Confidence 7899999999653221 11 1111111 111 1357899999988765321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHH----Hc---C--eeEEeeCccccCC
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVIL----EF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~----~~---~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.+.+.+ ++ + +++++|+.+.++.
T Consensus 161 -----~--~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 202 (319)
T 3ioy_A 161 -----S--PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202 (319)
T ss_dssp -----S--SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC---
T ss_pred -----C--CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCc
Confidence 1 2479999996554433 32 3 7889999998764
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=96.57 Aligned_cols=136 Identities=18% Similarity=0.137 Sum_probs=91.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+...++.. .+ +..|+.|++ ...++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFARE--GAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999996 99999999999999 9999999998765443321 11 234555541 23589
Q ss_pred CEEEEccCCCCC-C---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-L---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~-~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+.... . + +.. +...+. +...+.+++|++||...|... ...
T Consensus 87 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~- 155 (280)
T 3tox_A 87 DTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG----------FAG- 155 (280)
T ss_dssp CEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC----------CTT-
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC----------CCC-
Confidence 999999996421 1 1 111 111111 122356799999998876211 111
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 156 -~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 196 (280)
T 3tox_A 156 -VAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196 (280)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTT
T ss_pred -chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCch
Confidence 347999999988776543 3 7889999999875
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.9e-09 Score=94.66 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=91.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c---cC---eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---MG---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~---~~---v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++.++.. . .. +..|+.|++ ...
T Consensus 20 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 20 GKRALITGATKGIGADIARAFAAA--GARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 999999999876543321 1 11 334665542 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~------~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
++|+|||+|+...... +... ...+. +...+ .+++|++||...|....
T Consensus 98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------- 166 (266)
T 4egf_A 98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLP----------- 166 (266)
T ss_dssp SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCT-----------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCC-----------
Confidence 8999999999654321 1111 11111 11122 46999999988764211
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.++.+.
T Consensus 167 ~--~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 208 (266)
T 4egf_A 167 D--HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEM 208 (266)
T ss_dssp T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHH
T ss_pred C--ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCch
Confidence 1 247999999888765543 3 7889999998874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=6.3e-09 Score=92.57 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=90.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch-hh----hccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD-EL----INMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~-~l----~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+... .. ...+ +..|+.|++ ...
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKE--GANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 478999996 99999999999999 999999999865321 11 1112 234565541 235
Q ss_pred CCCEEEEccCCCCCC------C---hHHH-------HHHHHHHh----CCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL------D---YPGD-------VRLAALSW----NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~------~---~~~~-------~~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
++|+|||+|+..... . +.+. ...+.... ...+++|++||...|.... .
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 192 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNE-----------T- 192 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCT-----------T-
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCC-----------C-
Confidence 799999999864321 1 1111 11121111 1346899999998875321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 193 -~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 233 (291)
T 3ijr_A 193 -LIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPL 233 (291)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTH
T ss_pred -ChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCc
Confidence 247999999998776543 3 7889999999885
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.6e-09 Score=94.83 Aligned_cols=137 Identities=15% Similarity=0.128 Sum_probs=91.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-----CeeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-----GITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-----~v~~d~~d~~-----------~~~~~ 143 (267)
+.+||||+ |.||++++++|+++ |++|++++|+.+...++. .. .+..|+.|++ ...++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAAD--GVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 67999996 99999999999999 999999999876543322 11 1334565541 23589
Q ss_pred CEEEEccCCCCC----CC-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS----LD-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~----~~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+.... .+ +.+ +...+. +...+.+++|++||...+... +. |
T Consensus 107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~---------~~-~- 175 (283)
T 3v8b_A 107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF---------TT-P- 175 (283)
T ss_dssp CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC---------CS-T-
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC---------CC-C-
Confidence 999999996421 11 111 111111 122356899999998765311 11 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 176 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 217 (283)
T 3v8b_A 176 GATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCT
T ss_pred CchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCc
Confidence 1357999999998776543 2 7889999998875
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.02 E-value=2.1e-09 Score=95.71 Aligned_cols=163 Identities=10% Similarity=0.044 Sum_probs=95.6
Q ss_pred cccccccccccccccccccchhccccccCCcccccccCCCCCCCCCeEEEEcc-cHHhHHHHHHHHhcCCCC---eEEEE
Q 024494 40 KLKLRPLVASSSSSSMATNFQVTASSSIGAVKEEQKGASSGGVGENDLLIVGP-GVLGRLVAEQWRQEHPGC---QIYGQ 115 (267)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~---~V~~l 115 (267)
+++-.++|+-..+.+|........ ....+++||||+ |.||++++++|+++ |+ +|+.+
T Consensus 6 ~~~~~~~~~~~~~~~m~~~~~~~~-----------------~l~~k~~lVTGas~GIG~aia~~l~~~--G~~~~~V~~~ 66 (287)
T 3rku_A 6 HHHHHSSFLVPRGSHMSQGRKAAE-----------------RLAKKTVLITGASAGIGKATALEYLEA--SNGDMKLILA 66 (287)
T ss_dssp --------------CCTTCHHHHH-----------------HHTTCEEEEESTTSHHHHHHHHHHHHH--HTTCSEEEEE
T ss_pred ccccccceeeecCcccccCccchh-----------------hcCCCEEEEecCCChHHHHHHHHHHHc--CCCCceEEEE
Confidence 444555666667777776422110 112378999996 99999999999999 87 99999
Q ss_pred eCCCCCchhhhc----c--C-----eeeecCCcc-----------ccCCCCEEEEccCCCCC-C---C-----hHH----
Q 024494 116 TMTADHHDELIN----M--G-----ITPSLKWTE-----------ATQKFPYVIFCAPPSRS-L---D-----YPG---- 160 (267)
Q Consensus 116 ~R~~~~~~~l~~----~--~-----v~~d~~d~~-----------~~~~~D~Vi~~a~~~~~-~---~-----~~~---- 160 (267)
+|+.+..+++.. . + +.+|+.|++ ...++|+|||+|+.... . + +.+
T Consensus 67 ~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 67 ARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp ESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 998765543321 0 1 234565541 23579999999996431 1 1 111
Q ss_pred ---HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--e
Q 024494 161 ---DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--G 222 (267)
Q Consensus 161 ---~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~ 222 (267)
+...+. +...+.+++|++||...+.... . ...|+.+|.+.|.+.+.+ + +
T Consensus 147 N~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~-----------~--~~~Y~asKaa~~~l~~~la~e~~~~gIrv 213 (287)
T 3rku_A 147 NVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYP-----------T--GSIYCASKFAVGAFTDSLRKELINTKIRV 213 (287)
T ss_dssp HTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCT-----------T--CHHHHHHHHHHHHHHHHHHHHTTTSSCEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCC-----------C--CchHHHHHHHHHHHHHHHHHHhhhcCCEE
Confidence 111111 1223678999999987653211 1 247999999988776542 2 7
Q ss_pred eEEeeCccccCC
Q 024494 223 CVLRLAGLYISL 234 (267)
Q Consensus 223 ~IlR~~~iyGp~ 234 (267)
..++|+.+..+.
T Consensus 214 n~v~PG~v~T~~ 225 (287)
T 3rku_A 214 ILIAPGLVETEF 225 (287)
T ss_dssp EEEEESCEESSH
T ss_pred EEEeCCcCcCcc
Confidence 889999998764
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.01 E-value=3.3e-09 Score=93.66 Aligned_cols=136 Identities=13% Similarity=0.150 Sum_probs=90.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch---hhhccC-----eeeecCCcc----------ccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD---ELINMG-----ITPSLKWTE----------ATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~---~l~~~~-----v~~d~~d~~----------~~~~~D 144 (267)
.+++||||+ |.||++++++|+++ |++|++++|++.... ++...+ +..|+.|.+ ...++|
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 31 GRTAVVTGAGSGIGRAIAHGYARA--GAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 378999996 99999999999999 999999997643211 111112 234555541 225899
Q ss_pred EEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|||+|+...... +.. +...+. +...+.+++|++||...|.... + .
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~-----------~--~ 175 (273)
T 3uf0_A 109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR-----------N--V 175 (273)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS-----------S--C
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCC-----------C--C
Confidence 9999999754321 111 111111 1223568999999988764211 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.|.+.+.+ + +..++|+.++.+.
T Consensus 176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (273)
T 3uf0_A 176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTAN 215 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCc
Confidence 47999999998776543 3 7889999999886
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.5e-09 Score=95.81 Aligned_cols=136 Identities=13% Similarity=0.093 Sum_probs=91.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++. ..+ +..|+.|++ ...+
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVA--GARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 378999996 99999999999999 999999999876543321 112 234555541 2347
Q ss_pred CCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
+|+|||+|+...... +... ...+. +...+.+++|++||...+... .+
T Consensus 104 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~-----------~~- 171 (271)
T 4ibo_A 104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELAR-----------AT- 171 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBC-----------TT-
T ss_pred CCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCC-----------CC-
Confidence 999999999653221 1111 11111 112356799999997765321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++.+.
T Consensus 172 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (271)
T 4ibo_A 172 -VAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDM 212 (271)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred -chhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcc
Confidence 347999999988776543 3 7889999999885
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.7e-09 Score=94.53 Aligned_cols=136 Identities=13% Similarity=-0.004 Sum_probs=89.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++..+.+. ..+ +..|+.|++ ...+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 7 GKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 378999996 99999999999999 999999999865543321 112 234555541 2348
Q ss_pred CCEEEEccCCC-CCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPS-RSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~-~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+|+|||+|+.. .... +.. +...+. . ...+.+++|++||...+.... .
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 153 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPP-----------N 153 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCT-----------T
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCC-----------C
Confidence 99999999865 2111 111 111111 1 122567999999987664211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+.. + +.+++|+.+..+.
T Consensus 154 --~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 194 (262)
T 1zem_A 154 --MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGF 194 (262)
T ss_dssp --BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSH
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcch
Confidence 247999998887665432 3 7889999887653
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.1e-10 Score=96.26 Aligned_cols=147 Identities=7% Similarity=-0.073 Sum_probs=91.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHh-cCCCCeEEEEeCCCCCchhh----hcc--C---eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDEL----INM--G---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~-~~pG~~V~~l~R~~~~~~~l----~~~--~---v~~d~~d~~-----------~~~ 141 (267)
+++|||||+ |+||++++++|++ + |++|++++|+.++...+ ... . +..|+.|.+ ...
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~--g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLF--SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS--SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhc--CCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 478999996 9999999999999 8 99999999986544322 111 1 234555541 123
Q ss_pred CCCEEEEccCCCCCC----ChHHH-----------HHHHHHHhC----CCCcEEEEcCCccccC-CC----------CCc
Q 024494 142 KFPYVIFCAPPSRSL----DYPGD-----------VRLAALSWN----GEGSFLFTSSSAIYDC-SD----------NGA 191 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~~~~~-----------~~~l~~~~~----~v~r~V~~SS~~VYg~-~~----------~~~ 191 (267)
++|+|||+|+..... ...+. ..+++.... ..++||++||...|.. .. ...
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~ 161 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET 161 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccc
Confidence 799999999865321 11111 112211111 1359999999877632 00 011
Q ss_pred cCCCC-------------------CCCCCCCCHHHHHHHHHHHHHHH-----------cC--eeEEeeCccccCC
Q 024494 192 CDEDS-------------------PVVPIGRSPRTDVLLKAEKVILE-----------FG--GCVLRLAGLYISL 234 (267)
Q Consensus 192 ~~E~~-------------------p~~p~~~~~y~~~k~~aE~~l~~-----------~~--~~IlR~~~iyGp~ 234 (267)
++|+. +..| ...|+.+|.+.|.+++. .+ +.+++|+.+..+.
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~ 234 (276)
T 1wma_A 162 ITEEELVGLMNKFVEDTKKGVHQKEGWP--SSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM 234 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCC--SCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred cchhhhhhhhhhhhhhhcccccccCCCc--cchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence 22211 1122 25899999888876543 24 7889999998764
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.01 E-value=1.8e-09 Score=95.46 Aligned_cols=135 Identities=14% Similarity=0.095 Sum_probs=90.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+.++...+. ..+ +..|+.|++ ...+.
T Consensus 25 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAAR--GIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999996 99999999999999 999999999876543321 112 234565541 23579
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH---HH-----hCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA---LS-----WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~~-----~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
|+|||+|+...... +.+ +...+. +. ..+.+++|++||...+.... .
T Consensus 103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~-----------~ 171 (279)
T 3sju_A 103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVM-----------Y 171 (279)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCT-----------T
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCC-----------C
Confidence 99999999754321 111 111111 11 13567999999988763211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 172 --~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 212 (279)
T 3sju_A 172 --AAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM 212 (279)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHH
T ss_pred --ChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchH
Confidence 247999999888776542 3 7889999998764
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.9e-09 Score=94.91 Aligned_cols=135 Identities=10% Similarity=0.067 Sum_probs=88.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|.++ |++|++++|++++.+++. ..+ +..|+.|++ ...++
T Consensus 5 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVA--GAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999996 99999999999999 999999999876544332 112 234565541 23589
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|+|||+||...... +.. +...+. +...+.+++|++||...+.... .
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~-----------~-- 149 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVP-----------T-- 149 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCT-----------T--
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCC-----------C--
Confidence 99999999754321 111 111111 1223568999999987764211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-----C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-----~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+.+ + +..++|+.+..+.
T Consensus 150 ~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~ 188 (264)
T 3tfo_A 150 AAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESEL 188 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC----
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcc
Confidence 247999999888765542 3 7789999987764
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.5e-09 Score=95.70 Aligned_cols=135 Identities=14% Similarity=0.068 Sum_probs=90.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCcc-----------ccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWTE-----------ATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~~ 143 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+...++. ..+ +..|+.|.+ ...++
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARR--GARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 68999996 99999999999999 999999999876554322 112 234565541 23489
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|+|||+|+...... +.+ +..++. + ...+ .+++|++||...+.... .
T Consensus 110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 177 (301)
T 3tjr_A 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNA-----------G- 177 (301)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCT-----------T-
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCC-----------C-
Confidence 99999999653211 111 111111 1 1123 57999999988763211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 178 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 218 (301)
T 3tjr_A 178 -LGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKL 218 (301)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSH
T ss_pred -chHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccc
Confidence 347999999888765543 3 7889999987663
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.4e-09 Score=94.13 Aligned_cols=140 Identities=16% Similarity=0.111 Sum_probs=90.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC------------Cchhh----hcc--C---eeeecCCcc---
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHDEL----INM--G---ITPSLKWTE--- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~------------~~~~l----~~~--~---v~~d~~d~~--- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.. ..... ... . +..|+.|++
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAAD--GADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 378999996 99999999999999 999999998732 11111 111 1 234565541
Q ss_pred --------ccCCCCEEEEccCCCCCCC----hHHH-------HHHHH------H-HhCCCCcEEEEcCCccccCCCCCcc
Q 024494 139 --------ATQKFPYVIFCAPPSRSLD----YPGD-------VRLAA------L-SWNGEGSFLFTSSSAIYDCSDNGAC 192 (267)
Q Consensus 139 --------~~~~~D~Vi~~a~~~~~~~----~~~~-------~~~l~------~-~~~~v~r~V~~SS~~VYg~~~~~~~ 192 (267)
...++|+|||+|+...... +.+. ...+. + +....+++|++||...+....
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 166 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVG---- 166 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCC----
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCc----
Confidence 2358999999999754321 1111 11111 1 111257999999987654221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 193 DEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 193 ~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+. | ....|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 167 ---~~~-~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 212 (278)
T 3sx2_A 167 ---SAD-P-GSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM 212 (278)
T ss_dssp ---CSS-H-HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred ---cCC-C-CchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCcc
Confidence 011 1 1247999999988776543 2 7889999999986
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=3.1e-09 Score=92.27 Aligned_cols=136 Identities=9% Similarity=0.072 Sum_probs=91.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---c---CeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---M---GITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~---~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|+++...++.. . .+..|+.|++ ...++|+
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAAD--GATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 478999996 99999999999999 9999999998765543321 1 1334565541 2358999
Q ss_pred EEEccCCCCCCC--------hHHH-------HHHHH------HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPGD-------VRLAA------LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~-------~~~l~------~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
|||+|+...... +.+. ...+. +...+ .+++|++||...+.... . .
T Consensus 84 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~ 150 (247)
T 3rwb_A 84 LVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----------N--M 150 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCT-----------T--C
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCC-----------C--c
Confidence 999999654321 1111 11111 11223 57999999988764321 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.+.+.+.+ + +..++|+.+..+.
T Consensus 151 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~ 190 (247)
T 3rwb_A 151 AAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDG 190 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCcc
Confidence 47999998888765543 3 7889999998764
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.99 E-value=1.2e-09 Score=93.74 Aligned_cols=134 Identities=14% Similarity=0.199 Sum_probs=87.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------cc--CCCCEEEEcc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------AT--QKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~--~~~D~Vi~~a 150 (267)
+++||||+ |.||++++++|+++ |++|++++|+++..... ...+..|+.|++ .. .++|+|||+|
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~A 80 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQADS-NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVA 80 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTSSE-EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCEEEEEecCccccccc-cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECC
Confidence 67999996 99999999999999 99999999987654221 112234444431 12 4799999999
Q ss_pred CCCCC----CC-hHHH-----------HHHHHH---Hh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 151 PPSRS----LD-YPGD-----------VRLAAL---SW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 151 ~~~~~----~~-~~~~-----------~~~l~~---~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
+.... .+ ..+. ...+.. .. ...+++|++||...|... .+ ...|+.+|
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~--~~~Y~~sK 147 (236)
T 1ooe_A 81 GGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT-----------PS--MIGYGMAK 147 (236)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-----------TT--BHHHHHHH
T ss_pred cccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC-----------CC--cHHHHHHH
Confidence 96431 11 1111 111111 11 123699999998876321 11 24799999
Q ss_pred HHHHHHHHHc---------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF---------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~---------~--~~IlR~~~iyGp~ 234 (267)
.+.|.+.+.+ + +.++||+.++++.
T Consensus 148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~ 182 (236)
T 1ooe_A 148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM 182 (236)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc
Confidence 9998776532 2 7889999998763
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.9e-09 Score=94.19 Aligned_cols=135 Identities=11% Similarity=0.038 Sum_probs=91.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|.++ |++|++++|+++...++.+ ..+..|+.|++ ...++|++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 86 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEG--GAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLL 86 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 78999996 99999999999999 9999999998766544321 12344665541 23589999
Q ss_pred EEccCCCCCCC--------hHHH-------HHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 147 IFCAPPSRSLD--------YPGD-------VRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~-------~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
||+|+...... +.+. ...+..... ..+++|++||...+...+ + ...|+
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~ 153 (255)
T 4eso_A 87 HINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHP-----------G--MSVYS 153 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCT-----------T--BHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCC-----------C--chHHH
Confidence 99999754321 1111 111111111 235899999988764321 1 34799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 154 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 189 (255)
T 4eso_A 154 ASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPT 189 (255)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSS
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcc
Confidence 9999988776542 3 7889999999874
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=2.2e-09 Score=94.50 Aligned_cols=136 Identities=12% Similarity=0.096 Sum_probs=90.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhh----hccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDEL----INMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l----~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++|+. +..+.+ ...+ +..|+.|++ ...
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAA--GAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 367999996 99999999999999 99999999843 322221 1111 334666541 234
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+...... +.. +...+. +...+.+++|++||...+.... .
T Consensus 106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 174 (269)
T 4dmm_A 106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNP-----------G 174 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCC-----------C
Confidence 8999999999754321 111 111111 1223568999999987654211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++.+.
T Consensus 175 --~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~ 215 (269)
T 4dmm_A 175 --QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM 215 (269)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSC
T ss_pred --chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcc
Confidence 247999999888765542 3 7889999999886
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.3e-09 Score=94.09 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=85.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|+++ .|+.+..+.+. ..+ +..|+.|.+ ...+
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 104 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQ--GWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR 104 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 67999996 99999999999999 9999887 55544333221 111 234555531 2358
Q ss_pred CCEEEEccCCCCC-C-----C---hHHH-------HHHHH---HH---h---CCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 143 FPYVIFCAPPSRS-L-----D---YPGD-------VRLAA---LS---W---NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-~-----~---~~~~-------~~~l~---~~---~---~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
+|+|||+|+.... . . +.+. ...+. .. . .+.++||++||...+....
T Consensus 105 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------- 175 (272)
T 4e3z_A 105 LDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA--------- 175 (272)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT---------
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC---------
Confidence 9999999996532 1 1 1111 11111 11 1 1356899999988764211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ....|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 176 --~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 218 (272)
T 4e3z_A 176 --T-QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218 (272)
T ss_dssp --T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred --C-CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCc
Confidence 0 1246999999998765542 3 7889999999885
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=98.98 E-value=3.3e-09 Score=92.45 Aligned_cols=136 Identities=13% Similarity=0.232 Sum_probs=85.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC-----eeeecCCcc----cc------CCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWTE----AT------QKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~----~~------~~~ 143 (267)
.+++||||+ |.||++++++|.++ |++|++++|++++..++.. .+ +..|+.|++ .+ .+.
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAE--GFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHT--TCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 378999996 99999999999999 9999999998876544321 12 234565541 11 478
Q ss_pred CEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+|+...... +.. +...+. +...+.+++|++||...+... | .
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~-~ 151 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG------------S-G 151 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC------------T-T
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC------------C-C
Confidence 99999999654321 111 111111 122356799999998765321 1 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--e-eEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--G-CVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~-~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.+ + + .++.|+.+..+.
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~ 193 (252)
T 3h7a_A 152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAW 193 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChh
Confidence 347999999988776543 3 4 578998887764
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.6e-09 Score=93.69 Aligned_cols=135 Identities=14% Similarity=0.090 Sum_probs=90.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc--C-----eeeecCCc-------cccCCCCE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--G-----ITPSLKWT-------EATQKFPY 145 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~--~-----v~~d~~d~-------~~~~~~D~ 145 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+...+.. .. + +..|+.|+ +...++|+
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAE--GANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 67999996 99999999999999 999999999876543321 11 1 23355553 23458999
Q ss_pred EEEccCCCCCCC--------hHH-------H----HHHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 146 VIFCAPPSRSLD--------YPG-------D----VRLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~-------~----~~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
+||+|+...... +.+ + ++.++ +...+.+++|++||...|... .+ ..
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~--~~ 155 (267)
T 3t4x_A 89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS-----------QE--MA 155 (267)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----------TT--CH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----------Cc--ch
Confidence 999999754321 111 1 11111 122356799999998876321 11 35
Q ss_pred HHHHHHHHHHHHHHHc----C-----eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF----G-----GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~-----~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.|.+.+.+ + +..+.|+.+..+.
T Consensus 156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 194 (267)
T 3t4x_A 156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEG 194 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCcc
Confidence 7999999998776543 2 6789999988764
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-09 Score=92.69 Aligned_cols=135 Identities=13% Similarity=0.021 Sum_probs=88.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEE-e--CCCCCchhhhc-c-Ceee-ecCCc--------cccCCCCEEEEc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ-T--MTADHHDELIN-M-GITP-SLKWT--------EATQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l-~--R~~~~~~~l~~-~-~v~~-d~~d~--------~~~~~~D~Vi~~ 149 (267)
+++||||+ |.||++++++|+++ |++|+++ + |++++.+.+.. . +.+. +..+. +...++|+|||+
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~ 79 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQD--GYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGEAIDTIVSN 79 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHSTTEEECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEecCCcCCHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999996 99999999999999 9999999 6 88665443321 1 2221 11111 234579999999
Q ss_pred cCCCCC---C---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 150 APPSRS---L---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 150 a~~~~~---~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
|+.... . + +.. +...+. +...+.+++|++||...+... | . ...
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~---------~--~--~~~ 146 (244)
T 1zmo_A 80 DYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL---------A--Y--NPL 146 (244)
T ss_dssp CCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC---------T--T--CTT
T ss_pred CCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC---------C--C--chH
Confidence 986432 1 1 111 111111 122356899999998876421 1 1 246
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 147 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 184 (244)
T 1zmo_A 147 YGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCc
Confidence 999999988776543 3 7889999987764
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.98 E-value=2.3e-09 Score=92.43 Aligned_cols=136 Identities=15% Similarity=0.048 Sum_probs=88.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~-----------~~~~~D~ 145 (267)
++++||||+ |.||++++++|.++ |++|++++|+.++..++.. .+ +..|+.|++ ...+.|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVER--GHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence 478999996 99999999999999 9999999998765543321 12 334565541 2357999
Q ss_pred EEEccCCCCCC---C-----hHH-------HHHHHH---HH-h-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 146 VIFCAPPSRSL---D-----YPG-------DVRLAA---LS-W-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~-------~~~~l~---~~-~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
|||+|+..... + +.+ +...+. .. . ....++|++||...+.... . ...
T Consensus 81 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~-----------~--~~~ 147 (235)
T 3l6e_A 81 VLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKA-----------N--ESL 147 (235)
T ss_dssp EEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCS-----------S--HHH
T ss_pred EEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCC-----------C--CcH
Confidence 99999965321 1 111 111111 11 1 1223999999977653211 1 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|+.+|.+.+.+.+.+ + +..++|+.+..+.
T Consensus 148 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 185 (235)
T 3l6e_A 148 YCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEF 185 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcc
Confidence 999999998776543 2 6789999887654
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=2.1e-09 Score=94.81 Aligned_cols=136 Identities=9% Similarity=0.036 Sum_probs=90.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c---c---CeeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N---M---GITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~---~---~v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++..+.. . . .+..|+.|++ ...
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRH--GCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999996 99999999999999 999999999865433221 0 1 1234665541 235
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+...... +.. +..++. . ...+.+++|++||...+.... .
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 173 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQA-----------L 173 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCT-----------T
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCC-----------C
Confidence 8999999999543211 111 111111 1 112457999999987764211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.+ + +..++|+.++++.
T Consensus 174 --~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 214 (277)
T 4fc7_A 174 --QVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTE 214 (277)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSH
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecch
Confidence 247999999888776543 3 7889999999874
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=3.8e-09 Score=92.49 Aligned_cols=136 Identities=9% Similarity=0.016 Sum_probs=90.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c-c------CeeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-M------GITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~-~------~v~~d~~d~~-----------~~ 140 (267)
.+++||||+ |.||++++++|.++ |++|++++|++++...+. . . .+..|+.|++ ..
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEA--GAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 378999996 99999999999999 999999999876543321 1 1 1234555541 23
Q ss_pred CCCCEEEEccCCCCCC---C-----hHH-------HHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.+.|++||+|+..... + +.. +...+. . ...+.+++|++||...+...
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 153 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE------------ 153 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC------------
Confidence 5899999999965321 1 111 111111 1 12245789999998765321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 154 ~~-~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~ 196 (265)
T 3lf2_A 154 PH-MVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ 196 (265)
T ss_dssp TT-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred CC-chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCch
Confidence 11 247999999988776543 3 7889999998764
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=98.97 E-value=3.6e-09 Score=93.49 Aligned_cols=135 Identities=10% Similarity=0.012 Sum_probs=91.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC-----eeeecCCcc----------ccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWTE----------ATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~----------~~~~~D 144 (267)
+++||||+ |.||++++++|+++ |++|++++|+++....+.. .+ +..|+.|.+ ...++|
T Consensus 34 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGA--GAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 78999996 99999999999999 9999999998876544321 11 234555541 114799
Q ss_pred EEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
++||+|+...... +.. +...+. +...+.+++|++||...+.. ..+ .
T Consensus 112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~-----------~~~--~ 178 (275)
T 4imr_A 112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP-----------KSV--V 178 (275)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC-----------CTT--B
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC-----------CCC--c
Confidence 9999999643211 111 111111 12235679999999877641 111 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 179 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 218 (275)
T 4imr_A 179 TAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDR 218 (275)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcc
Confidence 46999999988776543 3 6789999998774
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=98.96 E-value=3.9e-09 Score=91.78 Aligned_cols=136 Identities=13% Similarity=0.049 Sum_probs=85.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++.. ..+..|+.|.+ ...++|+
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 378999996 99999999999999 9999999998766544321 12334555541 2347999
Q ss_pred EEEccCCCCC-C-----C---hHH-------HHHHHH-------HHh--C-CCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 146 VIFCAPPSRS-L-----D---YPG-------DVRLAA-------LSW--N-GEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 146 Vi~~a~~~~~-~-----~---~~~-------~~~~l~-------~~~--~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
|||+|+.... . + +.. +...+. .+. . ...++|++||...+...
T Consensus 87 li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~------------ 154 (261)
T 3n74_A 87 LVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR------------ 154 (261)
T ss_dssp EEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC------------
T ss_pred EEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC------------
Confidence 9999996531 1 1 111 111111 111 1 14579999998766321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 155 ~~-~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 197 (261)
T 3n74_A 155 PN-LAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPL 197 (261)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------
T ss_pred CC-ccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChh
Confidence 11 247999999998876543 3 7889999998875
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.96 E-value=3e-09 Score=93.97 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=88.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCcc-----------ccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWTE-----------ATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~~-----------~~~~~D~V 146 (267)
+++||||+ |.||++++++|+++ |++|++++|+.+...++.. . .+..|+.|++ ...++|+|
T Consensus 29 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGA--GYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 67899996 99999999999999 9999999998765543321 1 2345666541 23489999
Q ss_pred EEccCCCCC-C---C-----hHH-------HHHHHH------HHhCC--CCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 147 IFCAPPSRS-L---D-----YPG-------DVRLAA------LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 147 i~~a~~~~~-~---~-----~~~-------~~~~l~------~~~~~--v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
||+|+.... . + +.+ +...+. +...+ .+++|++||...+.... +
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~-----------~-- 173 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRP-----------Y-- 173 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCT-----------T--
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCC-----------C--
Confidence 999997432 1 1 111 111111 11222 46999999987663211 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 174 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 214 (272)
T 4dyv_A 174 SAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPM 214 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChh
Confidence 347999999998876543 3 6789999998775
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=4.4e-09 Score=93.14 Aligned_cols=135 Identities=11% Similarity=0.002 Sum_probs=88.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhhh-----cc-----CeeeecCC----cc----------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI-----NM-----GITPSLKW----TE---------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l~-----~~-----~v~~d~~d----~~---------- 138 (267)
+++||||+ |.||++++++|+++ |++|++++|++ ++...+. .. .+..|+.| ++
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~--G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQT--GYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 67999996 99999999999999 99999999987 5432221 11 13356666 41
Q ss_pred -ccCCCCEEEEccCCCCCC--------------ChHHHHH-----------HHH---HH---hCC------CCcEEEEcC
Q 024494 139 -ATQKFPYVIFCAPPSRSL--------------DYPGDVR-----------LAA---LS---WNG------EGSFLFTSS 180 (267)
Q Consensus 139 -~~~~~D~Vi~~a~~~~~~--------------~~~~~~~-----------~l~---~~---~~~------v~r~V~~SS 180 (267)
...++|+|||+|+..... .-.+... .+. .. ..+ .+++|++||
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS 181 (288)
T 2x9g_A 102 RAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCD 181 (288)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECC
T ss_pred HhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEec
Confidence 234799999999864311 1011111 111 11 112 469999999
Q ss_pred CccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 181 SAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 181 ~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|... .+ ...|+.+|.+.|.+.+.+ + +.+++|+.++++.
T Consensus 182 ~~~~~~~-----------~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 182 AMVDQPC-----------MA--FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp TTTTSCC-----------TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred ccccCCC-----------CC--CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 8876421 11 347999998888765542 3 7889999999885
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.96 E-value=3.6e-09 Score=91.69 Aligned_cols=136 Identities=9% Similarity=0.072 Sum_probs=89.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchhh----hccC-----eeeecCCc-----------cccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDEL----INMG-----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~ 141 (267)
.++|||||+ |.||++++++|+++ |++|++++ |+.+..... ...+ +..|+.|. +...
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKD--GFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHT--TEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 478999996 99999999999999 99999988 444443221 1112 23455553 1335
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+...... +.+ +...+. +...+.+++|++||...+.... +
T Consensus 91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 159 (256)
T 3ezl_A 91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQF-----------G 159 (256)
T ss_dssp CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCS-----------C
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCC-----------C
Confidence 7999999999654211 111 111111 1223568999999987664211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 160 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 200 (256)
T 3ezl_A 160 --QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred --CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcc
Confidence 347999999888776542 3 7889999998774
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-09 Score=93.31 Aligned_cols=134 Identities=13% Similarity=0.036 Sum_probs=89.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHh-cCCCCeEEEEeCCCC-CchhhhccCeeeecCCcc---------ccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTAD-HHDELINMGITPSLKWTE---------ATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~-~~pG~~V~~l~R~~~-~~~~l~~~~v~~d~~d~~---------~~~~~D~Vi~~a~ 151 (267)
|+++||||+ |.||++++++|++ . |++|+..+|+++ ....+ ..+..|+.|++ ...++|+|||+|+
T Consensus 4 ~k~vlITGas~gIG~~~a~~l~~~~--g~~v~~~~~~~~~~~~~~--~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg 79 (244)
T 4e4y_A 4 MANYLVTGGSKGIGKAVVELLLQNK--NHTVINIDIQQSFSAENL--KFIKADLTKQQDITNVLDIIKNVSFDGIFLNAG 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTST--TEEEEEEESSCCCCCTTE--EEEECCTTCHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCeEEEeCCCChHHHHHHHHHHhcC--CcEEEEeccccccccccc--eEEecCcCCHHHHHHHHHHHHhCCCCEEEECCc
Confidence 578999996 9999999999999 7 899999999866 32222 23455666541 1237899999999
Q ss_pred CCCCC---C-----hHHH-------HHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHH
Q 024494 152 PSRSL---D-----YPGD-------VRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLK 212 (267)
Q Consensus 152 ~~~~~---~-----~~~~-------~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~ 212 (267)
..... + +... ...+..... ..+++|++||...|...+ . ...|+.+|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~--~~~Y~asKaa 146 (244)
T 4e4y_A 80 ILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKP-----------N--SFAYTLSKGA 146 (244)
T ss_dssp CCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCT-----------T--BHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCC-----------C--CchhHHHHHH
Confidence 75321 1 1111 111211111 125899999988764211 1 2479999999
Q ss_pred HHHHHHHc-------C--eeEEeeCccccCC
Q 024494 213 AEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 213 aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|.+.+.+ + +..++|+.++.+.
T Consensus 147 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 177 (244)
T 4e4y_A 147 IAQMTKSLALDLAKYQIRVNTVCPGTVDTDL 177 (244)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEESCBCCHH
T ss_pred HHHHHHHHHHHHHHcCeEEEEEecCccCchh
Confidence 98776542 3 7889999998875
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.9e-09 Score=90.38 Aligned_cols=134 Identities=12% Similarity=0.101 Sum_probs=87.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc-----------cc--CCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE-----------AT--QKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~-----------~~--~~~D~Vi~~ 149 (267)
++++||||+ |.||++++++|+++ |++|++++|+++....- ...+..|+.|++ .. .++|+|||+
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~ 83 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEASA-SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCV 83 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSSE-EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCEEEEEeCChhhccCC-cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEc
Confidence 378999996 99999999999999 99999999987654221 112334555431 12 479999999
Q ss_pred cCCCCC----CC-----hHH-------HHHHHHH---Hh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 150 APPSRS----LD-----YPG-------DVRLAAL---SW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 150 a~~~~~----~~-----~~~-------~~~~l~~---~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
|+.... .+ +.+ +...+.. .. ...+++|++||...|.... + ...|+.+
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~as 150 (241)
T 1dhr_A 84 AGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP-----------G--MIGYGMA 150 (241)
T ss_dssp CCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-----------T--BHHHHHH
T ss_pred ccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCC-----------C--chHHHHH
Confidence 996431 11 111 1111111 11 1236999999988764211 1 2479999
Q ss_pred HHHHHHHHHHc---------C--eeEEeeCccccC
Q 024494 210 LLKAEKVILEF---------G--GCVLRLAGLYIS 233 (267)
Q Consensus 210 k~~aE~~l~~~---------~--~~IlR~~~iyGp 233 (267)
|.+.|.+.+.+ + +..++|+.+-.+
T Consensus 151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~ 185 (241)
T 1dhr_A 151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 185 (241)
T ss_dssp HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc
Confidence 99998876542 2 678999987554
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=4.6e-09 Score=89.91 Aligned_cols=136 Identities=15% Similarity=0.089 Sum_probs=88.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-----cc--C---eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NM--G---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-----~~--~---v~~d~~d~~-----------~~~ 141 (267)
|+++||||+ |.||++++++|+++ |++|+.++|+.++.+.+. .. . +.+|+.|++ ...
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARD--GYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 578999996 99999999999999 999999999876543321 11 1 234565541 224
Q ss_pred CCCEEEEccCCCCCCC--------hHH-------HHHHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPG-------DVRLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
++|+|||+|+...... +.. +...+. .. ..+.+++|++||...+... |.
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~------------~~ 147 (235)
T 3l77_A 80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI------------PY 147 (235)
T ss_dssp SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC------------TT
T ss_pred CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC------------CC
Confidence 7999999999653221 111 111111 11 1234677777776544211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-----C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-----~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 148 -~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~ 186 (235)
T 3l77_A 148 -GGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYF 186 (235)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSST
T ss_pred -cchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCcccccc
Confidence 247999999999876653 3 7889999987653
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=1e-08 Score=91.42 Aligned_cols=135 Identities=12% Similarity=0.047 Sum_probs=90.2
Q ss_pred CeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cCeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ | .||++++++|+++ |++|++++|+++..+.+.. ..+.+|+.|++ ...+
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQ--GAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 6 9999999999999 9999999998654322211 12345666641 2358
Q ss_pred CCEEEEccCCCCC----C---C-----hHHH-------HHHHHHHh----CCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPGD-------VRLAALSW----NGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~~-------~~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
+|+|||+|+.... . + +... ...+.... ...+++|++||...+...
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~------------ 176 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV------------ 176 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC------------
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC------------
Confidence 9999999997531 1 1 1111 11111111 124589999998766321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ....|+.+|.+.|.+.+.+ + +..++|+.++.+.
T Consensus 177 ~-~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 219 (296)
T 3k31_A 177 P-HYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLA 219 (296)
T ss_dssp T-TTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSS
T ss_pred C-CchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCch
Confidence 1 1358999999998776543 3 7889999999875
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.94 E-value=3.3e-09 Score=93.78 Aligned_cols=135 Identities=12% Similarity=0.128 Sum_probs=87.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c---C---eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---G---ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~---~---v~~d~~d~~-----------~~~ 141 (267)
.++|||||+ |.||++++++|+++ |++|++++|++++...+.. . . +..|+.|.+ ...
T Consensus 28 ~k~vlITGasggIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 9999999998765443221 1 1 234555531 234
Q ss_pred CCCEEEEc-cCCCCCC----C---hHH-------HHHHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 142 KFPYVIFC-APPSRSL----D---YPG-------DVRLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 142 ~~D~Vi~~-a~~~~~~----~---~~~-------~~~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
++|+|||+ ++..... + +.. +...+. .. ..+.+++|++||...+... | +
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------~--~- 173 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY---------P--M- 173 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC---------T--T-
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCC---------C--C-
Confidence 89999999 5643221 1 111 111111 11 1134799999998766421 1 1
Q ss_pred CCCHHHHHHHHHHHHHHH----c-----C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILE----F-----G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~----~-----~--~~IlR~~~iyGp 233 (267)
...|+.+|...|.+.+. + + +++++|+.+..+
T Consensus 174 -~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~ 215 (286)
T 1xu9_A 174 -VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215 (286)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH
T ss_pred -ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh
Confidence 35799999988876543 2 3 688999998765
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.1e-08 Score=88.93 Aligned_cols=136 Identities=14% Similarity=0.113 Sum_probs=88.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c---C---eeeec--CCc-----------c
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---G---ITPSL--KWT-----------E 138 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~---~---v~~d~--~d~-----------~ 138 (267)
..+++||||+ |.||++++++|+++ |++|++++|++++..++.. . . +..|+ .|. +
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARY--GATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 3478999996 99999999999999 9999999998765433211 0 1 23455 443 1
Q ss_pred ccCCCCEEEEccCCCCC----CC-----hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 139 ATQKFPYVIFCAPPSRS----LD-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~----~~-----~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
...++|+|||+|+.... .+ +... ...+. +...+.+++|++||...+....
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~-------- 160 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA-------- 160 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCT--------
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCC--------
Confidence 23589999999996321 11 1111 11111 1224568999999987653211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc----C----eeEEeeCccccC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYIS 233 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp 233 (267)
. ...|+.+|.+.|.+.+.+ + +..+.|+.+..+
T Consensus 161 ---~--~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~ 200 (252)
T 3f1l_A 161 ---N--WGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA 200 (252)
T ss_dssp ---T--CHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH
T ss_pred ---C--CchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc
Confidence 1 247999999998776543 2 566788877543
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.93 E-value=5.3e-09 Score=92.69 Aligned_cols=135 Identities=12% Similarity=0.089 Sum_probs=88.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----------cCeeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----------MGITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----------~~v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|.++ |++|++++|+++..+++.. ..+..|+.|++ ...+
T Consensus 34 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAE--GYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 9999999998765433221 12345666541 2357
Q ss_pred CCEEEEccCCCCC-C---C-----hHHH-------H----HHHH--HHhCC--CCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 143 FPYVIFCAPPSRS-L---D-----YPGD-------V----RLAA--LSWNG--EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 143 ~D~Vi~~a~~~~~-~---~-----~~~~-------~----~~l~--~~~~~--v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.|+|||+|+.... . + +.+. . +.++ +...+ .+++|++||...+...
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----------- 180 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR----------- 180 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC-----------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC-----------
Confidence 8999999996432 1 1 1111 1 1111 11222 5699999997765321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 181 ~~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 223 (281)
T 4dry_A 181 PN--SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDM 223 (281)
T ss_dssp TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC--
T ss_pred CC--ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChh
Confidence 11 357999999988776543 3 6789999888764
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=98.93 E-value=5.4e-09 Score=91.74 Aligned_cols=136 Identities=13% Similarity=0.054 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhh----hccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DEL----INMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l----~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.++|||||+ |.||++++++|+++ |++|++++|+.... +.+ ...+ +..|+.|.+ ...
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 29 GKNVLITGASKGIGAEIAKTLASM--GLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 368999996 99999999999999 99999999964332 221 1112 234555531 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
++|+|||+|+...... +.+. ...+. +...+.+++|++||...+.... +
T Consensus 107 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 175 (271)
T 4iin_A 107 GLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNM-----------G 175 (271)
T ss_dssp SCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T
T ss_pred CCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCC-----------C
Confidence 8999999999754321 1111 11111 1223568999999987653211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 176 --~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (271)
T 4iin_A 176 --QTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM 216 (271)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-
T ss_pred --chHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCc
Confidence 357999999998876543 3 7889999998875
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=98.93 E-value=6.8e-09 Score=91.29 Aligned_cols=136 Identities=9% Similarity=-0.005 Sum_probs=89.1
Q ss_pred CCeEEEEc-c--cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhc-----cCeeeecCCcc-----------ccC
Q 024494 84 ENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELIN-----MGITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~G-a--G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~-----~~v~~d~~d~~-----------~~~ 141 (267)
.+++|||| + |.||++++++|.++ |++|++++|+++ ...++.. ..+..|+.|++ ...
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36899998 4 79999999999999 999999999875 1222221 11334665541 234
Q ss_pred CCCEEEEccCCCCC----C---C-----hHH-------HHHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRS----L---D-----YPG-------DVRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~-------~~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
++|+|||+|+.... . + +.. +...+..... ..+++|++||...+... +
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------~- 153 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM---------A- 153 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---------T-
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC---------C-
Confidence 78999999996532 1 1 111 1111211111 13699999997665321 1
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.+ + +..++|+.+.++.
T Consensus 154 -~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 195 (275)
T 2pd4_A 154 -H--YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 195 (275)
T ss_dssp -T--CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred -C--chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccch
Confidence 1 247999999998776543 3 7889999999875
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.8e-08 Score=88.50 Aligned_cols=136 Identities=15% Similarity=0.159 Sum_probs=89.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhh----hccC-----eeeecCCcc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDEL----INMG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l----~~~~-----v~~d~~d~~-----------~~ 140 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.+. ...+ ...+ +..|+.|.+ ..
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYARE--GADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 478999996 99999999999999 9999999887331 1111 1112 234555531 23
Q ss_pred CCCCEEEEccCCCCC-C---C-----hHHH-------HHHHHHHh----CCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS-L---D-----YPGD-------VRLAALSW----NGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~-------~~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.++|+|||+|+.... . + +... ...+.... ....++|++||...|.... .
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~-----------~ 195 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSP-----------H 195 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCT-----------T
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCC-----------C
Confidence 589999999996431 1 1 1111 11121111 1235999999998875321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 196 --~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 236 (294)
T 3r3s_A 196 --LLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH
T ss_pred --chHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCcccc
Confidence 247999999988776543 3 7889999999864
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.92 E-value=6.6e-09 Score=90.38 Aligned_cols=135 Identities=8% Similarity=-0.009 Sum_probs=86.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---------cC---eeeecCCcc-----------c
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---------MG---ITPSLKWTE-----------A 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---------~~---v~~d~~d~~-----------~ 139 (267)
.+++||||+ |.||++++++|.++ |++|++++|++++.+++.+ .. +..|+.|.+ .
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 368999996 99999999999999 9999999998765443221 11 334665541 2
Q ss_pred cCCCCEEEEccCCCCCC--C-----hHHH-------HHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSL--D-----YPGD-------VRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--~-----~~~~-------~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
..++|+|||+|+..... + +.+. ...+. +...+.+++|++||...+... .
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~ 153 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-----------A 153 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC------------------C
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC-----------C
Confidence 35799999999964321 1 1111 11111 122356799999997755311 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
+ ...|+.+|.+.+.+.+.+ + +..++|+.+..+
T Consensus 154 ~--~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 194 (250)
T 3nyw_A 154 D--GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD 194 (250)
T ss_dssp C--TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH
T ss_pred C--CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc
Confidence 1 247999999888776543 3 788999988654
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.92 E-value=1e-08 Score=89.39 Aligned_cols=134 Identities=15% Similarity=0.142 Sum_probs=89.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC-----eeeecCCcc-----------c-cCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG-----ITPSLKWTE-----------A-TQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~-----v~~d~~d~~-----------~-~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|+++....+.. .+ +..|+.|++ . ..+
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKA--GATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 67999996 99999999999999 9999999998665433211 11 234565541 1 457
Q ss_pred CCEEEEccCC--C-------CC----C-C-hHH-------HH----HHHH--HHhCCCCcEEEEcCCccccCCCCCccCC
Q 024494 143 FPYVIFCAPP--S-------RS----L-D-YPG-------DV----RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 143 ~D~Vi~~a~~--~-------~~----~-~-~~~-------~~----~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
.|+|||+|+. . .. + + +.. +. +.++ +...+.+++|++||...+...
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 156 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM------- 156 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-------
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-------
Confidence 8999999941 1 10 1 1 111 11 1111 112356899999998776321
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|...|.+.+.+ + +.+++|+.+..+.
T Consensus 157 -----~--~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 157 -----F--NVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp -----S--SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred -----C--CCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 1 247999999998876542 3 7899999998775
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=1.5e-08 Score=89.39 Aligned_cols=135 Identities=10% Similarity=0.015 Sum_probs=89.8
Q ss_pred CeEEEEcc-cH--HhHHHHHHHHhcCCCCeEEEEeCCC--CCchhhhcc-----CeeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTA--DHHDELINM-----GITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~--IG~~La~~L~~~~pG~~V~~l~R~~--~~~~~l~~~-----~v~~d~~d~-----------~~~~~~ 143 (267)
+++||||+ |+ ||++++++|+++ |++|++++|+. +...++... .+.+|+.|. +...+.
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHRE--GAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGL 104 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHc--CCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 68999996 88 999999999999 99999999987 222333211 133455553 134578
Q ss_pred CEEEEccCCCCC----CC---------hHHH-------HHHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 144 PYVIFCAPPSRS----LD---------YPGD-------VRLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 144 D~Vi~~a~~~~~----~~---------~~~~-------~~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
|+|||+|+.... .. +... ...+. .. .....++|++||...+...
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 173 (280)
T 3nrc_A 105 DAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM----------- 173 (280)
T ss_dssp CEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC-----------
T ss_pred CEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC-----------
Confidence 999999997532 11 1111 11111 11 1135799999998776421
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 174 ~~--~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 216 (280)
T 3nrc_A 174 PS--YNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLA 216 (280)
T ss_dssp TT--THHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSG
T ss_pred CC--chhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchh
Confidence 11 357999999988776542 3 7889999999875
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.2e-09 Score=89.18 Aligned_cols=124 Identities=15% Similarity=0.028 Sum_probs=85.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-------cccCCCCEEEEccCCCC-C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-------EATQKFPYVIFCAPPSR-S 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-------~~~~~~D~Vi~~a~~~~-~ 155 (267)
+++||||+ |.||++++++|.++ |++|++++|+.+ .|+.|+ +.+.++|++||+|+... .
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~--G~~V~~~~r~~~-----------~D~~~~~~v~~~~~~~g~id~lv~nAg~~~~~ 73 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESE--HTIVHVASRQTG-----------LDISDEKSVYHYFETIGAFDHLIVTAGSYAPA 73 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCST--TEEEEEESGGGT-----------CCTTCHHHHHHHHHHHCSEEEEEECCCCCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEecCCcc-----------cCCCCHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 57899996 99999999999999 999999999754 344443 23467999999999652 1
Q ss_pred C---C-----hHH-------HHHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Q 024494 156 L---D-----YPG-------DVRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 156 ~---~-----~~~-------~~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~ 216 (267)
. + +.. +...+..... ..+++|++||...+.... + ...|+.+|...|.+
T Consensus 74 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-----------~--~~~Y~asK~a~~~~ 140 (223)
T 3uce_A 74 GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA-----------N--TYVKAAINAAIEAT 140 (223)
T ss_dssp SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT-----------T--CHHHHHHHHHHHHH
T ss_pred CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC-----------C--chHHHHHHHHHHHH
Confidence 1 1 111 1111111111 235899999988764311 1 24799999998877
Q ss_pred HHHc----C---eeEEeeCccccCC
Q 024494 217 ILEF----G---GCVLRLAGLYISL 234 (267)
Q Consensus 217 l~~~----~---~~IlR~~~iyGp~ 234 (267)
.+.+ + +..++|+.+..+.
T Consensus 141 ~~~la~e~~~i~vn~v~PG~v~t~~ 165 (223)
T 3uce_A 141 TKVLAKELAPIRVNAISPGLTKTEA 165 (223)
T ss_dssp HHHHHHHHTTSEEEEEEECSBCSGG
T ss_pred HHHHHHhhcCcEEEEEEeCCCcchh
Confidence 6543 2 7789999999874
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.91 E-value=4.4e-09 Score=93.05 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=50.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhcc---C---eeeecCCc-c-----------ccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINM---G---ITPSLKWT-E-----------ATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~~---~---v~~d~~d~-~-----------~~~ 141 (267)
+++||||+ |.||++++++|+++ |++|++++|+.++..+ +... . +..|+.|+ + ...
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSN--GIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred cEEEEecCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 67999996 99999999999999 9999999998765432 2111 1 23466554 2 235
Q ss_pred CCCEEEEccCCC
Q 024494 142 KFPYVIFCAPPS 153 (267)
Q Consensus 142 ~~D~Vi~~a~~~ 153 (267)
++|+|||+||..
T Consensus 91 ~iD~lv~nAg~~ 102 (311)
T 3o26_A 91 KLDILVNNAGVA 102 (311)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCccc
Confidence 899999999975
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.90 E-value=8.8e-09 Score=92.80 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=87.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC---------chhh-------hccC-----eeeecCCcc----
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH---------HDEL-------INMG-----ITPSLKWTE---- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~---------~~~l-------~~~~-----v~~d~~d~~---- 138 (267)
+++||||+ |.||++++++|+++ |++|++++|+... .+.+ ...+ +..|+.|++
T Consensus 47 k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQD--GADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 67999996 99999999999999 9999999886221 1111 1111 234555541
Q ss_pred -------ccCCCCEEEEccCCCCCC---C-----hHH-------HHHHHH---H---HhCC-CCcEEEEcCCccccCCCC
Q 024494 139 -------ATQKFPYVIFCAPPSRSL---D-----YPG-------DVRLAA---L---SWNG-EGSFLFTSSSAIYDCSDN 189 (267)
Q Consensus 139 -------~~~~~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~---~---~~~~-v~r~V~~SS~~VYg~~~~ 189 (267)
...++|+|||+|+..... + +.. +...+. . ...+ .++||++||...|....
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~- 203 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP- 203 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC-
Confidence 235899999999965421 1 111 111111 1 1122 46899999987763211
Q ss_pred CccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 190 GACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 190 ~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.++++.
T Consensus 204 ----------~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 245 (317)
T 3oec_A 204 ----------G--QSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEM 245 (317)
T ss_dssp ----------T--BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH
T ss_pred ----------C--CcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcc
Confidence 1 247999999988776543 3 7889999999874
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.90 E-value=9.3e-09 Score=89.49 Aligned_cols=137 Identities=10% Similarity=0.098 Sum_probs=90.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCcc-----------ccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWTE-----------ATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~~-----------~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++..|+.|+.++|+++...++.+ ..+..|+.|++ ...+.|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 377999996 99999999999998223789999998765544322 12334665541 2358999
Q ss_pred EEEccCCCCC-C---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 146 VIFCAPPSRS-L---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 146 Vi~~a~~~~~-~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+||+|+.... . + +.. +...+. +...+ +++|++||...+.... + .
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~-----------~--~ 147 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFS-----------S--W 147 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSC-----------C--S
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCC-----------C--c
Confidence 9999996422 1 1 111 111111 11223 8999999988764211 1 3
Q ss_pred CHHHHHHHHHHHHHHHc-----C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-----~--~~IlR~~~iyGp~ 234 (267)
..|+.+|...|.+.+.+ + +..++|+.+..+.
T Consensus 148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~ 185 (254)
T 3kzv_A 148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDM 185 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCC
T ss_pred chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchh
Confidence 47999999998776543 3 7889999998874
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=8.6e-09 Score=88.72 Aligned_cols=135 Identities=13% Similarity=0.102 Sum_probs=86.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC------eeeec--CCc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG------ITPSL--KWT-----------EA 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~------v~~d~--~d~-----------~~ 139 (267)
.+++||||+ |.||++++++|+++ |++|++++|++++..++. ..+ +..|+ .|. +.
T Consensus 14 ~k~vlITGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 14 GRVILVTGAARGIGAAAARAYAAH--GASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHC--CCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 478999996 99999999999999 999999999876543321 111 12233 332 12
Q ss_pred cCCCCEEEEccCCCCC-C---C-----hHH-------HHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 140 TQKFPYVIFCAPPSRS-L---D-----YPG-------DVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~-~---~-----~~~-------~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
..++|+|||+|+.... . + +.+ +...+.. ...+.+++|++||...+....
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~--------- 162 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRA--------- 162 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCT---------
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCC---------
Confidence 3589999999996422 1 1 111 1111111 123467999999977653211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc--------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF--------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~--------~--~~IlR~~~iyGp 233 (267)
. ...|+.+|.+.|.+.+.+ + +..+.|+.+..+
T Consensus 163 --~--~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~ 204 (247)
T 3i1j_A 163 --N--WGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG 204 (247)
T ss_dssp --T--CHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH
T ss_pred --C--cchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc
Confidence 1 347999999988775532 2 567888877554
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.9e-08 Score=91.15 Aligned_cols=135 Identities=12% Similarity=-0.033 Sum_probs=89.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchhhhc-----cC-----eeeecCCcc--------------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELIN-----MG-----ITPSLKWTE-------------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~l~~-----~~-----v~~d~~d~~-------------- 138 (267)
+++||||+ |.||++++++|+++ |++|++++ |+++....+.. .+ +..|+.|++
T Consensus 47 k~~lVTGas~GIG~aia~~La~~--G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 124 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 124 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccc
Confidence 67999996 99999999999999 99999999 87654332211 11 234554432
Q ss_pred --------------ccCCCCEEEEccCCCCCC---Ch---------------HHHHH-----------HHH------HHh
Q 024494 139 --------------ATQKFPYVIFCAPPSRSL---DY---------------PGDVR-----------LAA------LSW 169 (267)
Q Consensus 139 --------------~~~~~D~Vi~~a~~~~~~---~~---------------~~~~~-----------~l~------~~~ 169 (267)
...++|+|||+|+..... +. .+... .+. +..
T Consensus 125 ~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~ 204 (328)
T 2qhx_A 125 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG 204 (328)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 123799999999864321 11 11111 111 112
Q ss_pred CC------CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 170 NG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 170 ~~------v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ .++||++||...+... .. ...|+.+|.+.|.+.+.+ + +.+++|+.+..+.
T Consensus 205 ~~~~~~~~~g~IV~isS~~~~~~~-----------~~--~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 205 TPAKHRGTNYSIINMVDAMTNQPL-----------LG--YTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp SCGGGSCSCEEEEEECCTTTTSCC-----------TT--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred cCCcCCCCCcEEEEECchhhccCC-----------CC--cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence 23 5799999998876421 11 347999999998776543 3 7889999999875
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=1.8e-08 Score=88.71 Aligned_cols=135 Identities=14% Similarity=0.084 Sum_probs=88.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-------------Cchhh----hccC-----eeeecCCcc---
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-------------HHDEL----INMG-----ITPSLKWTE--- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-------------~~~~l----~~~~-----v~~d~~d~~--- 138 (267)
+++||||+ |.||++++++|+++ |++|++++|+.. ...+. ...+ +..|+.|.+
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAE--GADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 67999996 99999999999999 999999998422 11111 1111 234555531
Q ss_pred --------ccCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCC-CCcEEEEcCCccccCCC
Q 024494 139 --------ATQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNG-EGSFLFTSSSAIYDCSD 188 (267)
Q Consensus 139 --------~~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~-v~r~V~~SS~~VYg~~~ 188 (267)
...++|++||+|+...... +.. +...+. +...+ .+++|++||...+...+
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 169 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQP 169 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCS
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCC
Confidence 2357999999999654321 111 111111 11112 46999999988764211
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 170 -----------~--~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 211 (277)
T 3tsc_A 170 -----------F--MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPM 211 (277)
T ss_dssp -----------S--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGG
T ss_pred -----------C--chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCc
Confidence 1 247999999998776543 3 7889999999885
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.7e-08 Score=89.92 Aligned_cols=136 Identities=10% Similarity=0.010 Sum_probs=88.4
Q ss_pred CCeEEEEcc-cH--HhHHHHHHHHhcCCCCeEEEEeCCCCCchh---hhc-----cCeeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHHDE---LIN-----MGITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~--IG~~La~~L~~~~pG~~V~~l~R~~~~~~~---l~~-----~~v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |. ||++++++|+++ |++|++++|+++..+. +.. ..+.+|+.|.+ ...
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREA--GAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHT--TCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 368999996 88 999999999999 9999999998532221 111 11334665541 235
Q ss_pred CCCEEEEccCCCCC----C---C-----hHHH-------HHHHHH---H-hCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRS----L---D-----YPGD-------VRLAAL---S-WNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~----~---~-----~~~~-------~~~l~~---~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
++|+|||+|+.... . + +... ...+.. . ....+++|++||...+....
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~---------- 178 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMP---------- 178 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCT----------
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCC----------
Confidence 89999999997531 1 1 1111 111111 1 12346999999988764211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 179 -~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 220 (293)
T 3grk_A 179 -N--YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLA 220 (293)
T ss_dssp -T--TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--
T ss_pred -c--hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchh
Confidence 1 358999999998776543 3 7889999999874
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.89 E-value=1e-08 Score=90.76 Aligned_cols=135 Identities=13% Similarity=0.021 Sum_probs=82.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchh----hhccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDE----LINMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~----l~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++|+ ++.... +...+ +..|+.|++ ...+
T Consensus 30 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAAS--GFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 67999996 99999999999999 9999999964 333222 11112 334666542 2348
Q ss_pred CCEEEEccCCC--CCCC---------------hHHHHHHHH------HHhCC---CCcEEEEcCCccccCCCCCccCCCC
Q 024494 143 FPYVIFCAPPS--RSLD---------------YPGDVRLAA------LSWNG---EGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 143 ~D~Vi~~a~~~--~~~~---------------~~~~~~~l~------~~~~~---v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
+|+|||+|+.. .... +..+...+. +...+ .+++|++||...+....
T Consensus 108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~-------- 179 (280)
T 4da9_A 108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSP-------- 179 (280)
T ss_dssp CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC---------------
T ss_pred CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCC--------
Confidence 99999999873 1110 111111111 11112 56899999987663211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 180 ---~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 221 (280)
T 4da9_A 180 ---E--RLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDM 221 (280)
T ss_dssp ---C--CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred ---C--ccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCc
Confidence 1 247999999998776542 2 7889999999876
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2e-08 Score=88.75 Aligned_cols=136 Identities=14% Similarity=0.080 Sum_probs=88.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC----------------chhh----hccC-----eeeecCCc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----------------HDEL----INMG-----ITPSLKWT 137 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~----------------~~~l----~~~~-----v~~d~~d~ 137 (267)
.+++||||+ |.||++++++|+++ |++|++++|+... ..++ ...+ +..|+.|+
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQE--GADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY 88 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHC--CCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence 378999996 99999999999999 9999999987321 1111 1111 23455554
Q ss_pred c-----------ccCCCCEEEEccCCCCCCC---------hHHH-------HHHHH------HHhCC-CCcEEEEcCCcc
Q 024494 138 E-----------ATQKFPYVIFCAPPSRSLD---------YPGD-------VRLAA------LSWNG-EGSFLFTSSSAI 183 (267)
Q Consensus 138 ~-----------~~~~~D~Vi~~a~~~~~~~---------~~~~-------~~~l~------~~~~~-v~r~V~~SS~~V 183 (267)
+ ...++|+|||+|+...... +... ...+. +...+ ..++|++||...
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 168 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG 168 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh
Confidence 1 2358999999999643211 1111 11111 11112 569999999887
Q ss_pred ccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 184 YDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 184 Yg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+.... . ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 169 ~~~~~-----------~--~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 215 (286)
T 3uve_A 169 LKAYP-----------H--TGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPM 215 (286)
T ss_dssp TSCCT-----------T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTT
T ss_pred ccCCC-----------C--ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCc
Confidence 64211 1 247999999888776543 3 7889999999885
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=1.7e-08 Score=88.10 Aligned_cols=136 Identities=5% Similarity=-0.012 Sum_probs=88.9
Q ss_pred CCeEEEEcc-cH--HhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c---C---eeeecCCcc-----------c
Q 024494 84 ENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M---G---ITPSLKWTE-----------A 139 (267)
Q Consensus 84 m~~ILV~Ga-G~--IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~---~---v~~d~~d~~-----------~ 139 (267)
.+++||||+ |+ ||++++++|+++ |++|++++|+....+.+.+ . . +..|+.|++ .
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEA--GARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHC--CCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 368999996 89 999999999999 9999999998643322211 1 1 234565541 2
Q ss_pred cCCCCEEEEccCCCCC----C----ChHHHH-----------HHHHHHh----CCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 140 TQKFPYVIFCAPPSRS----L----DYPGDV-----------RLAALSW----NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~----~----~~~~~~-----------~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
...+|+|||+|+.... . ...+.. ..+.... ...+++|++||...+...
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------- 155 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM--------- 155 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---------
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC---------
Confidence 3579999999996531 1 011111 1111111 124589999998766321
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
| ....|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 156 ---~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (266)
T 3oig_A 156 ---P-NYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLS 198 (266)
T ss_dssp ---T-TTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred ---C-CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccc
Confidence 1 1347999999988776543 3 7889999998864
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=98.88 E-value=1.9e-08 Score=89.17 Aligned_cols=132 Identities=13% Similarity=0.077 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-----------hhccC-----eeeecCCcc--------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMG-----ITPSLKWTE-------- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-----------l~~~~-----v~~d~~d~~-------- 138 (267)
.+++||||+ |.||++++++|.++ |++|++++|+.++.++ +...+ +..|+.|++
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAAD--GANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 368999996 99999999999999 9999999998764222 11111 234565541
Q ss_pred ---ccCCCCEEEEccCCCCCC---C-----hHH-------HHHHHHHH------hCCCCcEEEEcCCccccCCCCCccCC
Q 024494 139 ---ATQKFPYVIFCAPPSRSL---D-----YPG-------DVRLAALS------WNGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~~~------~~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
...+.|++||+|+..... + +.. +...+... ..+.+++|++||...+....
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------ 160 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKW------ 160 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGG------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCC------
Confidence 235899999999965321 1 111 11111111 12457999999977553210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCc
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAG 229 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~ 229 (267)
+ ....|+.+|.+.+.+.+.+ + +..+.|+.
T Consensus 161 -----~-~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~ 198 (285)
T 3sc4_A 161 -----L-RPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRT 198 (285)
T ss_dssp -----S-CSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSS
T ss_pred -----C-CCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCC
Confidence 1 1247999999988776543 3 77889984
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.87 E-value=2.4e-08 Score=89.04 Aligned_cols=136 Identities=14% Similarity=0.107 Sum_probs=88.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC------------Cchh----hhccC-----eeeecCCcc---
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD------------HHDE----LINMG-----ITPSLKWTE--- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~------------~~~~----l~~~~-----v~~d~~d~~--- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|++. ...+ +...+ +..|+.|++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLARE--GADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 368999996 99999999999999 999999998732 1111 11112 234555541
Q ss_pred --------ccCCCCEEEEccCCCCCC----C-----hHHH-------HHHHH---H---Hh-CCCCcEEEEcCCccccCC
Q 024494 139 --------ATQKFPYVIFCAPPSRSL----D-----YPGD-------VRLAA---L---SW-NGEGSFLFTSSSAIYDCS 187 (267)
Q Consensus 139 --------~~~~~D~Vi~~a~~~~~~----~-----~~~~-------~~~l~---~---~~-~~v~r~V~~SS~~VYg~~ 187 (267)
...+.|+|||+|+..... + +... ...+. . .. .+.+++|++||...+...
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 185 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA 185 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 235899999999954321 1 1111 11111 1 11 235799999998876321
Q ss_pred CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. . ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 186 ~-----------~--~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 228 (299)
T 3t7c_A 186 E-----------N--IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPM 228 (299)
T ss_dssp T-----------T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTT
T ss_pred C-----------C--cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcc
Confidence 1 1 247999999988776543 3 7889999999886
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.87 E-value=4.5e-08 Score=86.18 Aligned_cols=137 Identities=13% Similarity=0.072 Sum_probs=88.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchh----hhccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDE----LINMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~----l~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++++.. ..+. +...+ +..|+.|++ ...
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALE--GAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 378999996 99999999999999 999999977643 2222 11112 334565541 234
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
++|+|||+|+...... +.+. ...+. ... ...+++|++||....-. +..+
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~----------~~~~-- 176 (271)
T 3v2g_A 109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV----------PWPG-- 176 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC----------CSTT--
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC----------CCCC--
Confidence 8999999999654321 1111 11111 111 24579999998643211 1111
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 177 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~ 217 (271)
T 3v2g_A 177 ISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSS
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCc
Confidence 357999999988775543 3 7889999999885
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.6e-08 Score=88.41 Aligned_cols=137 Identities=12% Similarity=0.044 Sum_probs=88.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchh----hhcc--C---eeeecCCcc-----------cc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LINM--G---ITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~----l~~~--~---v~~d~~d~~-----------~~ 140 (267)
+.+++||||+ |.||++++++|+++ |++|+++++ +.+...+ +... . +..|+.|++ ..
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~--G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAAD--GFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 3467999996 99999999999999 999987664 4333222 1111 1 234555541 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHH-------HHHHHHH-------HhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPG-------DVRLAAL-------SWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~~-------~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.++|+|||+|+...... +.. +..+++. ...+.+++|++||...+....
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 172 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNR---------- 172 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCT----------
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCC----------
Confidence 58999999999654321 111 1111111 134567999999987653211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.+.+.+.. + +.+++|+.+..+.
T Consensus 173 -~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 214 (267)
T 4iiu_A 173 -G--QVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214 (267)
T ss_dssp -T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTT
T ss_pred -C--CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCc
Confidence 1 347999999777665432 3 7889999999886
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=98.85 E-value=3.9e-08 Score=86.24 Aligned_cols=137 Identities=13% Similarity=0.120 Sum_probs=87.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|++++++... .+. +...+ +..|+.|++ ...
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRL--GAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 478999996 99999999999999 9999998875432 222 11112 334665541 235
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-------HHHHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGD-------VRLAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+.|++||+|+...... +... ...+. ... ...+++|++||...... +..+
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~-- 163 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----------SVPK-- 163 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC----------CCTT--
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC----------CCCC--
Confidence 8999999999754321 1111 11111 111 13469999999763211 1111
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 164 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~ 204 (270)
T 3is3_A 164 HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204 (270)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTT
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChh
Confidence 357999999998776543 3 7889999998875
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=98.85 E-value=7.5e-09 Score=90.73 Aligned_cols=135 Identities=12% Similarity=0.050 Sum_probs=87.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhh----hccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDEL----INMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l----~~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++++++.. ..... ...+ +..|+.|++ ...+
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDA--GMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK 103 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTT--TCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56899996 99999999999999 999999985432 22211 1111 234565541 2348
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+|||+|+...... +.. +..++. +...+.+++|++||...+.... +
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~- 171 (269)
T 3gk3_A 104 VDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAF-----------G- 171 (269)
T ss_dssp CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------T-
T ss_pred CCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCC-----------C-
Confidence 999999999653211 111 111111 1123567999999987664211 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 172 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 212 (269)
T 3gk3_A 172 -QANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAM 212 (269)
T ss_dssp -BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred -cchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchh
Confidence 247999999888776542 3 7889999998875
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.8e-08 Score=85.68 Aligned_cols=135 Identities=11% Similarity=0.158 Sum_probs=75.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe---eeecCCc----------cccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI---TPSLKWT----------EATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v---~~d~~d~----------~~~~~~D~Vi~ 148 (267)
.+++||||+ |.||++++++|.+ |++|++++|+++....+.+ .++ ..|+.+. +...++|+|||
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~---g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 5 KKIAVVTGATGGMGIEIVKDLSR---DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp -CEEEEESTTSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 367999996 9999999999964 6899999998766544432 122 2233221 12357999999
Q ss_pred ccCCCCCCC--------hHHHH-------HHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 149 CAPPSRSLD--------YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 149 ~a~~~~~~~--------~~~~~-------~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
+|+...... +...+ ..+. +. ....+++|++||...|.... . ...|+.
T Consensus 82 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~~~Y~a 148 (245)
T 3e9n_A 82 AAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP-----------G--NTIYAA 148 (245)
T ss_dssp CC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC-----------------------CHHHHH
T ss_pred CCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCC-----------C--chHHHH
Confidence 999653221 11111 1111 11 11237999999988775321 1 247999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+|.+.|.+.+.+ + +.+++|+.+.++.
T Consensus 149 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 183 (245)
T 3e9n_A 149 SKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCch
Confidence 999999876543 3 7889999998875
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.83 E-value=6.4e-08 Score=88.53 Aligned_cols=133 Identities=14% Similarity=0.063 Sum_probs=86.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-----------hhccC-----eeeecCCcc--------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-----------LINMG-----ITPSLKWTE-------- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-----------l~~~~-----v~~d~~d~~-------- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++.+. +...+ +..|+.|++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~--Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKD--GANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHC--CCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 478999996 99999999999999 9999999998765321 11112 234665541
Q ss_pred ---ccCCCCEEEEccCCCCCC---C-----h-------HHHHHHHHH------HhCCCCcEEEEcCCccccCCCCCccCC
Q 024494 139 ---ATQKFPYVIFCAPPSRSL---D-----Y-------PGDVRLAAL------SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~---~-----~-------~~~~~~l~~------~~~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
...++|+|||+|+..... + + ..+...+.. ...+.++||++||...+....
T Consensus 123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~------ 196 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVW------ 196 (346)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGG------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCC------
Confidence 235899999999964321 1 1 111111111 223568999999987664310
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc------C--eeEEeeCc
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF------G--GCVLRLAG 229 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~------~--~~IlR~~~ 229 (267)
... ...|+.+|...+.+.+.+ + +..+.|+.
T Consensus 197 ---~~~--~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~ 234 (346)
T 3kvo_A 197 ---FKQ--HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKT 234 (346)
T ss_dssp ---TSS--SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSB
T ss_pred ---CCC--chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 111 347999999888765542 3 67788885
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.83 E-value=1.7e-08 Score=87.77 Aligned_cols=137 Identities=9% Similarity=-0.006 Sum_probs=87.2
Q ss_pred CCCeEEEEc-c--cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cCeeeecCCcc-----------cc
Q 024494 83 GENDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWTE-----------AT 140 (267)
Q Consensus 83 ~m~~ILV~G-a--G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~v~~d~~d~~-----------~~ 140 (267)
..++||||| + |.||++++++|+++ |++|++++|+....+.+.+ ..+..|+.|++ ..
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKRE--GAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHc--CCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 348899998 5 79999999999999 9999999998543322211 12345666541 23
Q ss_pred CCCCEEEEccCCCCC--------C-ChHHHHH-----------HHHHHhC----CCCcEEEEcCCccccCCCCCccCCCC
Q 024494 141 QKFPYVIFCAPPSRS--------L-DYPGDVR-----------LAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~--------~-~~~~~~~-----------~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
.+.|+|||+|+.... + ...+... .+..... ..+++|++||...+....
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 162 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIP-------- 162 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCT--------
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCC--------
Confidence 578999999996432 1 1111111 1111111 245899999987764211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 163 ---~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 204 (271)
T 3ek2_A 163 ---N--YNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLA 204 (271)
T ss_dssp ---T--TTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC----
T ss_pred ---C--ccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchh
Confidence 1 358999999998776543 3 7889999998875
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.83 E-value=3.9e-08 Score=86.51 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=86.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh-----------hcc-----CeeeecCCcc--------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL-----------INM-----GITPSLKWTE-------- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l-----------~~~-----~v~~d~~d~~-------- 138 (267)
.+++||||+ |.||++++++|.++ |++|++++|+.++.+.+ ... .+..|+.|++
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARD--GANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHC--CCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 378999996 99999999999999 99999999987643211 111 1344665541
Q ss_pred ---ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHH---H---HhCCCCcEEEEcCCccccCCCCCccCC
Q 024494 139 ---ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 139 ---~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
...++|++||+|+...... +. .+...+. . ...+.+++|++||...+....
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------ 157 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW------ 157 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH------
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC------
Confidence 2358999999999653221 11 1111111 1 123567999999987654210
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCcc
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~i 230 (267)
... ...|+.+|.+.+.+.+.+ + +..+.|+.+
T Consensus 158 ---~~~--~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~ 197 (274)
T 3e03_A 158 ---WGA--HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTV 197 (274)
T ss_dssp ---HHH--CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBC
T ss_pred ---CCC--CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcc
Confidence 001 247999999888776543 2 678899853
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.81 E-value=1.2e-08 Score=92.51 Aligned_cols=135 Identities=13% Similarity=0.059 Sum_probs=86.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c--------cC---eeeecCCcc----c-----
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--------MG---ITPSLKWTE----A----- 139 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~--------~~---v~~d~~d~~----~----- 139 (267)
++|||||+ |.||++++++|+++ |++|+.+.|+........ . .. +..|+.|.+ .
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~--G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 57999996 99999999999999 999988887654432211 0 12 234555541 1
Q ss_pred cCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
...+|+|||+|+...... +.+ +..++. +...+.++||++||...+...
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~----------- 149 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL----------- 149 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----------
Confidence 135999999998643211 111 111111 112367899999998765321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|...|.+.+.+ + +++++|+.+..+-
T Consensus 150 -~~-~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 -PF-NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp -TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -CC-ChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 11 247999999998776542 3 7889999987764
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=8.2e-08 Score=85.26 Aligned_cols=135 Identities=13% Similarity=-0.028 Sum_probs=87.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchhhh-----ccC-----eeeecCCcc--------------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELI-----NMG-----ITPSLKWTE-------------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~l~-----~~~-----v~~d~~d~~-------------- 138 (267)
+++||||+ |.||++++++|+++ |++|++++ |+++....+. ..+ +..|+.|++
T Consensus 10 k~~lVTGas~GIG~aia~~la~~--G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 87 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence 67999996 99999999999999 99999999 8765433221 111 234554432
Q ss_pred --------------ccCCCCEEEEccCCCCCC---Ch---------------HHHHH-----------HHH---H---Hh
Q 024494 139 --------------ATQKFPYVIFCAPPSRSL---DY---------------PGDVR-----------LAA---L---SW 169 (267)
Q Consensus 139 --------------~~~~~D~Vi~~a~~~~~~---~~---------------~~~~~-----------~l~---~---~~ 169 (267)
...++|+|||+|+..... +. .+... .+. . ..
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 167 (291)
T 1e7w_A 88 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG 167 (291)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 123799999999864321 11 11111 111 1 12
Q ss_pred CC------CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 170 NG------EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 170 ~~------v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+ .+++|++||...+... | ....|+.+|...+.+.+.+ + +..++|+.+..+.
T Consensus 168 ~~~~~~~~~g~Iv~isS~~~~~~~------------~-~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 168 TPAKHRGTNYSIINMVDAMTNQPL------------L-GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 234 (291)
T ss_dssp SCGGGSCSCEEEEEECCTTTTSCC------------T-TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred cCCCCCCCCcEEEEEechhhcCCC------------C-CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence 23 5799999998876421 1 1347999999888765542 3 7889999987654
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=3.6e-08 Score=94.24 Aligned_cols=135 Identities=14% Similarity=0.040 Sum_probs=86.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEEeCCCCCc---h----hhhccC-----eeeecCCcc----c------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHH---D----ELINMG-----ITPSLKWTE----A------ 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l~R~~~~~---~----~l~~~~-----v~~d~~d~~----~------ 139 (267)
.+++||||+ |.||++++++|.++ |++ |+.++|++... . ++...+ +.+|+.|++ .
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~ 303 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGD 303 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHc--CCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 478999985 99999999999999 995 99999986421 1 122223 234555542 1
Q ss_pred cCCCCEEEEccCCCCCCC---------------hHHHHHHHHHH--hCCCCcEEEEcCCc-cccCCCCCccCCCCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSLD---------------YPGDVRLAALS--WNGEGSFLFTSSSA-IYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~---------------~~~~~~~l~~~--~~~v~r~V~~SS~~-VYg~~~~~~~~E~~p~~p~ 201 (267)
....|+|||+|+...... ++.+..++... ..+.++||++||.. ++|...
T Consensus 304 ~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g------------- 370 (486)
T 2fr1_A 304 DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG------------- 370 (486)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT-------------
T ss_pred cCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCC-------------
Confidence 134699999999654321 12223333222 23578999999975 455321
Q ss_pred CCCHHHHHHHHHHHHHHH---cC--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILE---FG--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~---~~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+..+ .+ +++++++.+++++
T Consensus 371 -~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~g 407 (486)
T 2fr1_A 371 -LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG 407 (486)
T ss_dssp -CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred -CHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCc
Confidence 13578888877765543 34 8999999998775
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=4.1e-08 Score=88.71 Aligned_cols=131 Identities=15% Similarity=0.162 Sum_probs=84.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC---------CCCchh----hhccC--eeeecCCcc---------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---------ADHHDE----LINMG--ITPSLKWTE--------- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~---------~~~~~~----l~~~~--v~~d~~d~~--------- 138 (267)
.+++||||+ |.||++++++|.++ |++|++.++. .++.+. +...+ +..|+.+.+
T Consensus 9 gk~~lVTGas~GIG~~~a~~La~~--Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~ 86 (319)
T 1gz6_A 9 GRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 86 (319)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence 378999996 99999999999999 9999998653 322221 11112 234555431
Q ss_pred --ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHH------HHhCCCCcEEEEcCCc-cccCCCCCccCC
Q 024494 139 --ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAA------LSWNGEGSFLFTSSSA-IYDCSDNGACDE 194 (267)
Q Consensus 139 --~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~------~~~~~v~r~V~~SS~~-VYg~~~~~~~~E 194 (267)
...++|+|||+|+...... +. .+...+. +...+.++||++||.. .|+..
T Consensus 87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~------- 159 (319)
T 1gz6_A 87 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNF------- 159 (319)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-------
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-------
Confidence 2457999999999653221 11 1111111 1223568999999974 45521
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCcc
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~i 230 (267)
+ ...|+.+|.+.+.+.+.+ + +.+++|+.+
T Consensus 160 -----~--~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 160 -----G--QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp -----T--CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred -----C--CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 1 247999999988776543 3 788999876
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.76 E-value=2.6e-08 Score=89.71 Aligned_cols=134 Identities=14% Similarity=0.097 Sum_probs=84.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC----------CCCchhh----hccC-----eeeecCCcc-----
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT----------ADHHDEL----INMG-----ITPSLKWTE----- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~----------~~~~~~l----~~~~-----v~~d~~d~~----- 138 (267)
.+++||||+ |.||++++++|+++ |++|++++|+ .+....+ ...+ +..|+.|++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAE--GARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 367999996 99999999999999 9999999987 3322221 1112 233555531
Q ss_pred ------ccCCCCEEEEccCCCCCCC--------hH-------HHHHHHHH-------Hh--CC---CCcEEEEcCCcccc
Q 024494 139 ------ATQKFPYVIFCAPPSRSLD--------YP-------GDVRLAAL-------SW--NG---EGSFLFTSSSAIYD 185 (267)
Q Consensus 139 ------~~~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~-------~~--~~---v~r~V~~SS~~VYg 185 (267)
...++|+|||+|+...... +. .+...++. .. .+ .++||++||...+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 2348999999999754321 11 11111110 11 11 25999999987764
Q ss_pred CCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
... . ...|+.+|.+.|.+.+.+ + +..++|+ +..+
T Consensus 185 ~~~-----------~--~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~ 227 (322)
T 3qlj_A 185 GSV-----------G--QGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTR 227 (322)
T ss_dssp CBT-----------T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSC
T ss_pred CCC-----------C--CccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCc
Confidence 211 1 247999999998776543 3 6889998 5443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.76 E-value=8.7e-09 Score=78.16 Aligned_cols=68 Identities=22% Similarity=0.266 Sum_probs=53.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhccCeee---ecCCc----cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITP---SLKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~~v~~---d~~d~----~~~~~~D~Vi~~a~~ 152 (267)
+|++|+|+|+|++|+.+++.|.++ | ++|++++|++++.+.+...++.. ++.+. +.+.++|+||++++.
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l~~~--g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALLKTS--SNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPF 79 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHHHHC--SSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCG
T ss_pred CcCeEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCc
Confidence 468999999999999999999999 9 99999999987766554444433 34443 356799999999964
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=98.76 E-value=6e-08 Score=93.31 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=87.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCCc---h----hhhccCe-----eeecCCcc----cc--CCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADHH---D----ELINMGI-----TPSLKWTE----AT--QKF 143 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~~---~----~l~~~~v-----~~d~~d~~----~~--~~~ 143 (267)
.++|||||+ |.||.+++++|.++ |+ +|+.++|+.... . ++...+. .+|+.|.+ .+ ..+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~--G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAE--GAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 478999985 99999999999999 99 588899976321 1 2222232 34566642 22 459
Q ss_pred CEEEEccCCCCCCC--------h-------HHHHHHHHHHh--C-CCCcEEEEcCC-ccccCCCCCccCCCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------Y-------PGDVRLAALSW--N-GEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~-------~~~~~~l~~~~--~-~v~r~V~~SS~-~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
|+|||+|+...... + +.+..++.... . +.++||++||. ++||... ..
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g--------------~~ 402 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAG--------------QG 402 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTT--------------BH
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCC--------------CH
Confidence 99999999754321 1 11222332222 2 56899999997 4555321 24
Q ss_pred HHHHHHHHHHHHHHHc---C--eeEEeeCccc
Q 024494 205 PRTDVLLKAEKVILEF---G--GCVLRLAGLY 231 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~---~--~~IlR~~~iy 231 (267)
.|+.+|...|.+.+.. + +++++++.+-
T Consensus 403 ~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 403 AYAAANAALDALAERRRAAGLPATSVAWGLWG 434 (511)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEECCccc
Confidence 7999999998876643 3 8899999874
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=9.2e-08 Score=84.51 Aligned_cols=135 Identities=20% Similarity=0.155 Sum_probs=88.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCc-----------cccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWT-----------EATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~-----------~~~~~~D~ 145 (267)
.+++||||+ |.||++++++|+++ |++|++++|+.++..++.. . .+..|+.|+ +...+.|+
T Consensus 5 gk~~lVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 5 GEVALITGGASGLGRALVDRFVAE--GARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 378999996 99999999999999 9999999998766544322 1 133455553 13458999
Q ss_pred EEEccCCCCCC--------C-----hHHHH-------HHHH---HH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 146 VIFCAPPSRSL--------D-----YPGDV-------RLAA---LS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 146 Vi~~a~~~~~~--------~-----~~~~~-------~~l~---~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+||+|+..... + +...+ ..+. .. ....+++|++||...+.... .
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~ 151 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNG-----------G 151 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSS-----------S
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCC-----------C
Confidence 99999964211 1 11111 1111 10 01237999999987653211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C----eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp 233 (267)
...|+.+|.+.|.+.+.+ + +..+.|+.+..+
T Consensus 152 --~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~ 190 (281)
T 3zv4_A 152 --GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTD 190 (281)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC-
T ss_pred --CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCC
Confidence 247999999998776543 2 677999998776
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.75 E-value=4.7e-08 Score=85.96 Aligned_cols=135 Identities=11% Similarity=0.176 Sum_probs=87.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cC---eeeecCCcc----------ccCCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MG---ITPSLKWTE----------ATQKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~---v~~d~~d~~----------~~~~~D~Vi 147 (267)
+++||||+ |.||++++++|+++ |++|++++|+.++..++.. .. +..|+.|.+ ...+.|+||
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~--G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 57999996 99999999999999 9999999998766544321 11 334555531 234689999
Q ss_pred Ec-cCCCCCC--------C-----hHHH-------HHHHH------HHh------CCCCcEEEEcCCccccCCCCCccCC
Q 024494 148 FC-APPSRSL--------D-----YPGD-------VRLAA------LSW------NGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 148 ~~-a~~~~~~--------~-----~~~~-------~~~l~------~~~------~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
|+ ++..... + +.+. ..++. +.. .+.+++|++||...|....
T Consensus 109 ~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------ 182 (281)
T 3ppi_A 109 VAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQI------ 182 (281)
T ss_dssp ECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT------
T ss_pred EccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCC------
Confidence 99 4432211 1 1111 11111 111 2346899999988764211
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 183 -----~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 224 (281)
T 3ppi_A 183 -----G--QTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPI 224 (281)
T ss_dssp -----T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred -----C--CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchh
Confidence 1 347999999888765542 3 7889999998764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.4e-08 Score=86.78 Aligned_cols=135 Identities=10% Similarity=0.006 Sum_probs=85.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC-CCCchhhh----ccC-----eeeecCCcc-----------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT-ADHHDELI----NMG-----ITPSLKWTE-----------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~-~~~~~~l~----~~~-----v~~d~~d~~-----------~~~~ 142 (267)
+++||||+ |.||++++++|+++ |++|++.+++ .+..+.+. ..+ +..|+.|++ ...+
T Consensus 28 k~~lVTGas~GIG~aia~~la~~--G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASD--GFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHH--TCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57999996 99999999999999 9999988554 33332221 111 234565541 2358
Q ss_pred CCEEEEccCCCCCCC--------hHH-------HHHHHHHH---h-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPG-------DVRLAALS---W-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~-------~~~~l~~~---~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|++||+|+...... +.. +...++.. . ...+++|++||...+...+ . .
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-----------~--~ 172 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHP-----------S--Y 172 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCT-----------T--C
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCC-----------C--c
Confidence 999999999654221 111 11111111 1 1246899999987764321 1 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.|.+.+.+ + +..+.|+.+..+.
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 212 (267)
T 3u5t_A 173 GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL 212 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC---
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcc
Confidence 47999999998876543 2 7889999998764
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.74 E-value=6.1e-08 Score=84.88 Aligned_cols=133 Identities=13% Similarity=0.022 Sum_probs=85.9
Q ss_pred CeEEEEc---ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhhc-c-----CeeeecCCcc-----------ccC--
Q 024494 85 NDLLIVG---PGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-M-----GITPSLKWTE-----------ATQ-- 141 (267)
Q Consensus 85 ~~ILV~G---aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~~-~-----~v~~d~~d~~-----------~~~-- 141 (267)
+++|||| +|.||++++++|.++ |++|++++|++++. +++.+ . .+..|+.|++ ...
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 6799998 489999999999999 99999999987542 22221 1 1334665541 223
Q ss_pred -CCCEEEEccCCCC-----CCC--------hHHH-------HHHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCC
Q 024494 142 -KFPYVIFCAPPSR-----SLD--------YPGD-------VRLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 142 -~~D~Vi~~a~~~~-----~~~--------~~~~-------~~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
++|+|||+|+... ... +... ...+..... ..+++|++||...++.
T Consensus 86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~---------- 155 (269)
T 2h7i_A 86 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM---------- 155 (269)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC----------
T ss_pred CCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc----------
Confidence 7999999999653 111 1111 111111111 1258999998765431
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
| ....|+.+|...|.+.+.+ + +..++|+.+..+
T Consensus 156 ---~-~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 156 ---P-AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp ---T-TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred ---C-chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch
Confidence 1 1347999999888765542 3 788999998765
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=98.72 E-value=1.4e-07 Score=82.00 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=88.5
Q ss_pred CeEEEEc-c--cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hh----hhc---c---CeeeecCCc-----------cc
Q 024494 85 NDLLIVG-P--GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DE----LIN---M---GITPSLKWT-----------EA 139 (267)
Q Consensus 85 ~~ILV~G-a--G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~----l~~---~---~v~~d~~d~-----------~~ 139 (267)
+++|||| + |.||++++++|+++ |++|++++|+.... .+ +.. . .+..|+.|+ +.
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEM--GAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHT--SCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCChHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 7899998 4 59999999999999 99999999876543 11 111 1 123455553 13
Q ss_pred cCCCCEEEEccCCCCCCC--------hHH-------HHHHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 140 TQKFPYVIFCAPPSRSLD--------YPG-------DVRLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~~--------~~~-------~~~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
..+.|+|||+|+...... +.. +...+. +...+.+++|++||...+....
T Consensus 99 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 168 (267)
T 3gdg_A 99 FGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANF---------- 168 (267)
T ss_dssp TSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCS----------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCC----------
Confidence 457899999999654211 111 111111 1223568999999977653211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc----C----eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp~ 234 (267)
+.....|+.+|.+.|.+.+.+ + +..+.|+.+..+-
T Consensus 169 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~ 211 (267)
T 3gdg_A 169 -PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGL 211 (267)
T ss_dssp -SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSC
T ss_pred -CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccch
Confidence 111357999999998876653 2 6678899887664
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.9e-08 Score=86.31 Aligned_cols=136 Identities=11% Similarity=0.066 Sum_probs=86.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCcc----------ccCCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWTE----------ATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~~----------~~~~~D~Vi~~ 149 (267)
.+++||||+ |.||++++++|.++ |++|++++|+.+...+..... +..|+.|++ ...+.|++||+
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDA--GAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 367999996 99999999999999 999999999654332211112 344565541 13489999999
Q ss_pred cCCCCC----------C--ChHH-------HHHHHH---H---Hh--------CCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 150 APPSRS----------L--DYPG-------DVRLAA---L---SW--------NGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 150 a~~~~~----------~--~~~~-------~~~~l~---~---~~--------~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
|+.... + ++.+ +...+. . .. .+..++|++||...+....
T Consensus 87 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------- 158 (257)
T 3tl3_A 87 AGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI-------- 158 (257)
T ss_dssp GGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH--------
T ss_pred CCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC--------
Confidence 985421 1 1111 111111 1 11 2245899999988764211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+ ...|+.+|.+.|.+.+.. + +..++|+.+..+.
T Consensus 159 ---~--~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~ 200 (257)
T 3tl3_A 159 ---G--QAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPL 200 (257)
T ss_dssp ---H--HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred ---C--CccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChh
Confidence 1 247999999888765543 3 7889999998875
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.69 E-value=7e-08 Score=84.18 Aligned_cols=136 Identities=15% Similarity=0.128 Sum_probs=85.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchh----hhccC-----eeeecCCcc-----------ccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDE----LINMG-----ITPSLKWTE-----------ATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~----l~~~~-----v~~d~~d~~-----------~~~ 141 (267)
.+++||||+ |.||++++++|+++ |++|+++++ +.+.... +...+ +..|+.|++ ...
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQE--GANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 378999996 99999999999999 999999854 4433222 11112 344666541 235
Q ss_pred CCCEEEEccCCC-CCC---C-----hHHH-------HHHHHHHhC----CCCcEEEEcCCccc-cCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPS-RSL---D-----YPGD-------VRLAALSWN----GEGSFLFTSSSAIY-DCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~-~~~---~-----~~~~-------~~~l~~~~~----~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p 200 (267)
+.|+|||+|+.. ... + +... ...+..... ..+++|++||...+ ... +
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~ 153 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGG------------P 153 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCS------------T
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCC------------C
Confidence 799999999854 211 1 1111 111211111 23589999998876 211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C----eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp~ 234 (267)
+...|+.+|.+.|.+.+.+ + +..+.|+.+..+.
T Consensus 154 -~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~ 194 (259)
T 3edm_A 154 -GALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTF 194 (259)
T ss_dssp -TCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcc
Confidence 1247999999998876543 2 6789999998764
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=98.67 E-value=8.8e-08 Score=82.61 Aligned_cols=135 Identities=14% Similarity=0.048 Sum_probs=85.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchhh----hccC-----eeeecCCcc-----------cc--
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDEL----INMG-----ITPSLKWTE-----------AT-- 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~l----~~~~-----v~~d~~d~~-----------~~-- 140 (267)
+++||||+ |.||++++++|+++ |++|+++. |+.+...+. ...+ +..|+.|.+ ..
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLAND--GALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHC--CCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 67999996 99999999999999 99999874 444433222 1112 223454431 11
Q ss_pred ----CCCCEEEEccCCCCCCC----hHHHH-----------HHHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 ----QKFPYVIFCAPPSRSLD----YPGDV-----------RLAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 ----~~~D~Vi~~a~~~~~~~----~~~~~-----------~~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
..+|+|||+|+...... -.+.. ..+..... +.+++|++||...+...
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~---------- 155 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL---------- 155 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC----------
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC----------
Confidence 24999999999653221 11111 11111111 24589999998776421
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|.+.|.+.+.+ + +..++|+.+..+.
T Consensus 156 --~~-~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~ 198 (255)
T 3icc_A 156 --PD-FIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDM 198 (255)
T ss_dssp --TT-BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSS
T ss_pred --CC-cchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccc
Confidence 11 247999999988775542 3 7889999998875
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=98.66 E-value=6.5e-08 Score=84.62 Aligned_cols=134 Identities=16% Similarity=0.078 Sum_probs=81.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-------hhccC-----eeeecCCcc-----------cc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-------LINMG-----ITPSLKWTE-----------AT 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-------l~~~~-----v~~d~~d~~-----------~~ 140 (267)
+++||||+ |.||++++++|.++ |++|++++|.....+. +...+ +..|+.|++ ..
T Consensus 12 k~vlVTGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALE--SVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTS--SCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHC--CCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 67999996 99999999999999 9999999886433221 11112 234565541 23
Q ss_pred CCCCEEEEccCCCCCCC--------hHHH-------HHHHHHHh----CCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPGD-------VRLAALSW----NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~-------~~~l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.+.|++||+|+...... +... ...+.... .+.+++|++||...+.... .
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~-----------~- 157 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTG-----------F- 157 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHC-----------C-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCC-----------C-
Confidence 57999999999653321 1111 11111111 1346899999988775321 1
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+.+.+ + +..+.|+.+..+
T Consensus 158 -~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (262)
T 3ksu_A 158 -YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197 (262)
T ss_dssp -CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTH
T ss_pred -CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCc
Confidence 235888888887765542 2 788999988654
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.5e-07 Score=81.80 Aligned_cols=134 Identities=10% Similarity=-0.038 Sum_probs=85.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHh---cCCCCeEEEEeCCCCCchhhhc----c--C-----eeeecCCcc-----------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN----M--G-----ITPSLKWTE----------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~---~~pG~~V~~l~R~~~~~~~l~~----~--~-----v~~d~~d~~----------- 138 (267)
+++||||+ |.||++++++|++ + |++|++++|+++....+.. . + +..|+.|++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcC--CCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 67999996 9999999999999 8 9999999998765433211 0 2 234555541
Q ss_pred --ccCCCC--EEEEccCCCCC--------CC---hHHH-------HHHHHH---Hh---C--CCCcEEEEcCCccccCCC
Q 024494 139 --ATQKFP--YVIFCAPPSRS--------LD---YPGD-------VRLAAL---SW---N--GEGSFLFTSSSAIYDCSD 188 (267)
Q Consensus 139 --~~~~~D--~Vi~~a~~~~~--------~~---~~~~-------~~~l~~---~~---~--~v~r~V~~SS~~VYg~~~ 188 (267)
...+.| +|||+|+.... .. +... ...+.. .. . +.+++|++||...|...
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 163 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY- 163 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC-
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC-
Confidence 113578 99999996421 11 1111 111111 11 1 23579999998876421
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C---eeEEeeCccccC
Q 024494 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G---GCVLRLAGLYIS 233 (267)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~---~~IlR~~~iyGp 233 (267)
.+ ...|+.+|.+.|.+.+.+ . +..+.|+.+-.+
T Consensus 164 ----------~~--~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~ 203 (259)
T 1oaa_A 164 ----------KG--WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp ----------TT--CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred ----------CC--ccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcc
Confidence 11 247999999998876653 2 667888877544
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=4.1e-07 Score=79.59 Aligned_cols=135 Identities=10% Similarity=0.097 Sum_probs=89.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----CeeeecCCc-----------cccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT-----------EATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~v~~d~~d~-----------~~~~~~D~V 146 (267)
.++|||||+ +-||++++++|.++ |++|+..+|+++...++.+. .+..|+.|+ +.+.+.|++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL 79 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEA--GDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL 79 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 367999996 88999999999999 99999999987665544332 234566664 245789999
Q ss_pred EEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+...... +...+ +.++ +.. +..++|.+||...+... |. ...
T Consensus 80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~-~~G~IInisS~~~~~~~------------~~-~~~ 145 (247)
T 3ged_A 80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIK-NKGRIINIASTRAFQSE------------PD-SEA 145 (247)
T ss_dssp EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEECCGGGTSCC------------TT-CHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCcEEEEeecccccCC------------CC-CHH
Confidence 99998654321 11111 1110 112 34799999997765321 11 247
Q ss_pred HHHHHHHHHHHHHH----cC----eeEEeeCccccCC
Q 024494 206 RTDVLLKAEKVILE----FG----GCVLRLAGLYISL 234 (267)
Q Consensus 206 y~~~k~~aE~~l~~----~~----~~IlR~~~iyGp~ 234 (267)
|+.+|...+.+-+. ++ +-.+-|+.+--+.
T Consensus 146 Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~ 182 (247)
T 3ged_A 146 YASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTE 182 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCC
Confidence 99999887765443 33 6678898886665
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=2.5e-06 Score=75.04 Aligned_cols=135 Identities=10% Similarity=0.020 Sum_probs=87.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----------cccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----------~~~~~~D~Vi~~a~~ 152 (267)
|.+||||+ +-||++++++|.++ |++|+..+|+.+.... ....+..|+.|+ +.+.+.|++||+|+.
T Consensus 12 K~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~ 88 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLEL--GAQVLTTARARPEGLP-EELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGG 88 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHT--TCEEEEEESSCCTTSC-TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCC
T ss_pred CEEEEeccCcHHHHHHHHHHHHc--CCEEEEEECCchhCCC-cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 67899996 88999999999999 9999999997543211 123456677664 245689999999985
Q ss_pred CCC--C---C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 153 SRS--L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 153 ~~~--~---~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
... . + |.+.+ +.++ +...+..++|.+||...+-.. |.....|+.+
T Consensus 89 ~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~------------~~~~~~Y~as 156 (261)
T 4h15_A 89 SSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPL------------PESTTAYAAA 156 (261)
T ss_dssp CCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TTTCHHHHHH
T ss_pred CccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCC------------CCccHHHHHH
Confidence 421 1 1 11111 1111 122356799999997643211 1112478899
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|.+.+.+.+.. + +..+-|+.+--+.
T Consensus 157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~ 190 (261)
T 4h15_A 157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEA 190 (261)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHH
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcc
Confidence 98887665432 3 6778898886553
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.5e-07 Score=72.93 Aligned_cols=67 Identities=10% Similarity=0.206 Sum_probs=53.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCcc-----ccCCCCEEEEccC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWTE-----ATQKFPYVIFCAP 151 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~~-----~~~~~D~Vi~~a~ 151 (267)
.|++|+|+|+|.+|+.+++.|.++ |++|+++++++++...+...++.. |..+++ ...++|+||.+.+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~--g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAA--GKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 367899999999999999999999 999999999988776665555543 344432 2468999999887
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=1.5e-06 Score=76.97 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=28.7
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
+++||||+ |.||++++++|+++ |++|++++|+
T Consensus 9 k~~lVTGas~~~GIG~aia~~la~~--G~~V~~~~r~ 43 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWV 43 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEH
T ss_pred CEEEEECCCCCCChHHHHHHHHHHC--CCeEEEeecc
Confidence 67999984 79999999999999 9999999753
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.41 E-value=1.8e-06 Score=75.86 Aligned_cols=135 Identities=16% Similarity=0.128 Sum_probs=89.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhccC-----eeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LINMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
+.+||||+ +-||++++++|.++ |++|+..+|+++...+ +...+ +..|+.|+ +.+.+.
T Consensus 10 KvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 77899996 89999999999999 9999999998765433 22222 23456554 245689
Q ss_pred CEEEEccCCCCCCC--------hHHH-----------HHHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGD-----------VRLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~-----------~~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|++||+||...... |.+. .+.++ .++.+..++|.+||...+... |.
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~------------~~ 155 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR------------PT 155 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC------------TT
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC------------CC
Confidence 99999999754321 1111 11111 123356799999998765321 11
Q ss_pred CCCHHHHHHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+-+. + + +-.+-|+.+.-+.
T Consensus 156 -~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 196 (255)
T 4g81_D 156 -VAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196 (255)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred -chhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCch
Confidence 24799999888766443 2 3 6778999987764
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=2.5e-06 Score=81.80 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=86.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCCC---chh----hhccC-----eeeecCCcc-------c---c
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTADH---HDE----LINMG-----ITPSLKWTE-------A---T 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~~---~~~----l~~~~-----v~~d~~d~~-------~---~ 140 (267)
+++||||. |.||.+++++|.++ |+ +|+.+.|+... ..+ +...+ +.+|+.|++ . .
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~--Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQ--GAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHT--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CEEEEECCCCchHHHHHHHHHHC--CCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 78999985 99999999999999 98 78888886432 222 22223 234555541 1 1
Q ss_pred CCCCEEEEccCCC-CCC---C------------hHHHHHHHHHH--hCCCCcEEEEcCCcc-ccCCCCCccCCCCCCCCC
Q 024494 141 QKFPYVIFCAPPS-RSL---D------------YPGDVRLAALS--WNGEGSFLFTSSSAI-YDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 141 ~~~D~Vi~~a~~~-~~~---~------------~~~~~~~l~~~--~~~v~r~V~~SS~~V-Yg~~~~~~~~E~~p~~p~ 201 (267)
...|+|||+|+.. ... + ++.+..++... ....++||++||... +|...
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g------------- 384 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGG------------- 384 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTT-------------
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCC-------------
Confidence 3689999999975 221 1 11222233222 125679999999654 34211
Q ss_pred CCCHHHHHHHHHHHHHHHc---C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.++. + ++.+.|+.+.+.+
T Consensus 385 -~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~g 421 (496)
T 3mje_A 385 -QPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVG 421 (496)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSC
T ss_pred -cHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCc
Confidence 247999998887765543 4 7889999887665
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.38 E-value=2.7e-06 Score=80.60 Aligned_cols=136 Identities=11% Similarity=0.081 Sum_probs=86.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhh-hccC---eeeecCCcc-----------ccCC-CC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DEL-INMG---ITPSLKWTE-----------ATQK-FP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l-~~~~---v~~d~~d~~-----------~~~~-~D 144 (267)
.+.+||||+ |.||++++++|.++ |++|+.++|+.... .++ ...+ +.+|+.|.+ ...+ .|
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~--Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id 290 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARD--GATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD 290 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred CCEEEEeCCchHHHHHHHHHHHHC--CCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence 367999985 99999999999999 99999999864321 111 1122 344665541 2234 99
Q ss_pred EEEEccCCCCCCC--------hHH-------HHHHHHH---Hh---CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPG-------DVRLAAL---SW---NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~-------~~~~l~~---~~---~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+|||+|+...... +.. +..++.. .. .+..+||++||...+.... +.
T Consensus 291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~-------------g~ 357 (454)
T 3u0b_A 291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNR-------------GQ 357 (454)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCT-------------TC
T ss_pred EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCC-------------CC
Confidence 9999999754321 111 1112211 11 1457999999987653211 12
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|...+.+.+.+ + +..+.|+.+..+.
T Consensus 358 ~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 397 (454)
T 3u0b_A 358 TNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChh
Confidence 47999998777655432 3 7889999998775
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.38 E-value=8.5e-06 Score=71.03 Aligned_cols=134 Identities=17% Similarity=0.121 Sum_probs=89.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeeecCCc-------cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPSLKWT-------EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d~~d~-------~~~~~~D~Vi~~a~~~ 153 (267)
|.+||||+ +-||++++++|.++ |++|++.+|+.+......... +..|+.|+ +.+.+.|++||+||..
T Consensus 12 K~alVTGas~GIG~aia~~la~~--Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAEL--GAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS 89 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 78999996 88999999999999 999999999887654332222 34466654 3567899999999975
Q ss_pred CCCC------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 154 RSLD------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 154 ~~~~------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
.... |.+.+ +..+ +.. +..++|.+||...+-.. |. ...|+.+|...+
T Consensus 90 ~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~------------~~-~~~Y~asKaav~ 155 (242)
T 4b79_A 90 RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQ-RGGSILNIASMYSTFGS------------AD-RPAYSASKGAIV 155 (242)
T ss_dssp CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCEEEEEECCGGGTSCC------------SS-CHHHHHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeeccccCCC------------CC-CHHHHHHHHHHH
Confidence 4311 11111 1110 111 23799999997654211 11 247999998887
Q ss_pred HHHHH----c---C--eeEEeeCccccCC
Q 024494 215 KVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 215 ~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
.+-+. + + +-.+-|+.+.-|.
T Consensus 156 ~ltr~lA~Ela~~gIrVNaV~PG~i~T~m 184 (242)
T 4b79_A 156 QLTRSLACEYAAERIRVNAIAPGWIDTPL 184 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCC-
T ss_pred HHHHHHHHHhhhcCeEEEEEEeCCCCChh
Confidence 66443 2 2 6678899887664
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.36 E-value=1.2e-06 Score=68.43 Aligned_cols=98 Identities=10% Similarity=0.163 Sum_probs=63.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCcc-----ccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWTE-----ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~~-----~~~~~D~Vi~~a~~~~ 154 (267)
.|++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+...+... +..+++ ...++|+||++++...
T Consensus 5 ~~~~v~I~G~G~iG~~~a~~l~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~ 82 (144)
T 2hmt_A 5 KNKQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI 82 (144)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence 457899999999999999999999 999999999876655444333332 333331 2568999999987531
Q ss_pred CCChHHHHHHHHHHhCCCCcEEEEcCCcccc
Q 024494 155 SLDYPGDVRLAALSWNGEGSFLFTSSSAIYD 185 (267)
Q Consensus 155 ~~~~~~~~~~l~~~~~~v~r~V~~SS~~VYg 185 (267)
.... .+... ....+++++|..++...|.
T Consensus 83 -~~~~-~~~~~-~~~~~~~~ii~~~~~~~~~ 110 (144)
T 2hmt_A 83 -QAST-LTTLL-LKELDIPNIWVKAQNYYHH 110 (144)
T ss_dssp -HHHH-HHHHH-HHHTTCSEEEEECCSHHHH
T ss_pred -HHHH-HHHHH-HHHcCCCeEEEEeCCHHHH
Confidence 0000 11111 2234667777777665553
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.35 E-value=2.4e-06 Score=66.41 Aligned_cols=66 Identities=14% Similarity=0.115 Sum_probs=50.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeee---ecCCc-----cccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP---SLKWT-----EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~---d~~d~-----~~~~~~D~Vi~~a~~ 152 (267)
|+|+|+|+|.+|+.+++.|.+. |++|++++|+++....+.. .++.. +..++ ..+.++|+||++.+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCC
Confidence 7899999999999999999999 9999999998776655542 24433 23332 125789999999754
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.35 E-value=2.2e-06 Score=84.05 Aligned_cols=132 Identities=13% Similarity=0.074 Sum_probs=75.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC---------CCCCchhh----hccC--eeeecCCc---------
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM---------TADHHDEL----INMG--ITPSLKWT--------- 137 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R---------~~~~~~~l----~~~~--v~~d~~d~--------- 137 (267)
..+.+||||+ |.||++++++|.++ |++|++++| +.+..+.+ ...+ +..|+.|.
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~ 95 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAER--GAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIET 95 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHH
Confidence 3467999996 99999999999999 999999988 33333222 1112 23444443
Q ss_pred --cccCCCCEEEEccCCCCCC---C-----hHH-------HHHHHH------HHhCCCCcEEEEcCCccc-cCCCCCccC
Q 024494 138 --EATQKFPYVIFCAPPSRSL---D-----YPG-------DVRLAA------LSWNGEGSFLFTSSSAIY-DCSDNGACD 193 (267)
Q Consensus 138 --~~~~~~D~Vi~~a~~~~~~---~-----~~~-------~~~~l~------~~~~~v~r~V~~SS~~VY-g~~~~~~~~ 193 (267)
+...++|+|||+||..... + +.. +...+. +...+.+++|++||...+ +..
T Consensus 96 ~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~------ 169 (613)
T 3oml_A 96 AIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNF------ 169 (613)
T ss_dssp ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCT------
T ss_pred HHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC------
Confidence 1234789999999965321 1 111 111111 122356799999997654 321
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCcc
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGL 230 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~i 230 (267)
. ...|+.+|.+.+.+.+.+ + +..+.|+.+
T Consensus 170 ------~--~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 170 ------G--QVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA 207 (613)
T ss_dssp ------T--CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--
T ss_pred ------C--ChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC
Confidence 1 247999999888766543 3 677888754
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.31 E-value=4.6e-06 Score=73.18 Aligned_cols=134 Identities=13% Similarity=0.170 Sum_probs=88.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
|.+||||+ +-||++++++|.++ |++|+..+|++++.++. ...+ +..|+.|+ +.+.+.
T Consensus 8 KvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 77999996 78999999999999 99999999987665433 2222 34466654 245689
Q ss_pred CEEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 144 PYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 144 D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
|++||.||.... . + |.+.+ +.++ +...+..++|.+||..-+-.. |.
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~------------~~ 153 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGG------------FA 153 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSS------------SS
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCC------------CC
Confidence 999999985432 1 1 11111 1111 122356799999997654211 11
Q ss_pred CCCHHHHHHHHHHHHHHH----c---C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp 233 (267)
...|+.+|...+.+-+. + + +-.+-|+.+--+
T Consensus 154 -~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~ 193 (254)
T 4fn4_A 154 -GAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTN 193 (254)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred -ChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCc
Confidence 24799999887765443 2 3 677889988655
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.30 E-value=5e-06 Score=72.44 Aligned_cols=135 Identities=10% Similarity=-0.056 Sum_probs=86.0
Q ss_pred CeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc---C---eeeecCCc-----------ccc
Q 024494 85 NDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM---G---ITPSLKWT-----------EAT 140 (267)
Q Consensus 85 ~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~---~---v~~d~~d~-----------~~~ 140 (267)
|.+||||+ | =||++++++|.++ |++|+..+|+++..+++. +. . +..|+.|+ +.+
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQL--GAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 77999996 5 5999999999999 999999999876544332 11 1 23456553 245
Q ss_pred CCCCEEEEccCCCCCC-------C-hHHHHH-----H------HHHH-h---CCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 141 QKFPYVIFCAPPSRSL-------D-YPGDVR-----L------AALS-W---NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~-------~-~~~~~~-----~------l~~~-~---~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
.+.|++||+|+..... + ..+... + +... . ....++|.+||..-.-..
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~---------- 154 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV---------- 154 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC----------
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc----------
Confidence 6899999999864321 1 111111 0 0011 1 134689999997643211
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|...+.+.+. + + +..+-|+.+--+.
T Consensus 155 --~~-~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 197 (256)
T 4fs3_A 155 --QN-YNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLS 197 (256)
T ss_dssp --TT-THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGG
T ss_pred --cc-chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChh
Confidence 11 34799999888766443 2 3 6778999886653
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=6.1e-06 Score=66.20 Aligned_cols=96 Identities=14% Similarity=0.013 Sum_probs=63.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-ccCeeee---cCCcc-----ccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPS---LKWTE-----ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-~~~v~~d---~~d~~-----~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|.+|+.+++.|.+. |++|++++|++++...+. ..+.... ..+++ .+.++|+||.+.+...
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSS--GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 47899999999999999999999 999999999988776655 4454332 22221 2568999999986521
Q ss_pred CCChHHHHHHHHHHhCCCCcEEEEcCCccc
Q 024494 155 SLDYPGDVRLAALSWNGEGSFLFTSSSAIY 184 (267)
Q Consensus 155 ~~~~~~~~~~l~~~~~~v~r~V~~SS~~VY 184 (267)
....+..++....+..++|...+...+
T Consensus 97 ---~~~~~~~~~~~~~~~~~iv~~~~~~~~ 123 (155)
T 2g1u_A 97 ---TNFFISMNARYMFNVENVIARVYDPEK 123 (155)
T ss_dssp ---HHHHHHHHHHHTSCCSEEEEECSSGGG
T ss_pred ---HHHHHHHHHHHHCCCCeEEEEECCHHH
Confidence 111111221222456667666654443
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.24 E-value=1.9e-06 Score=68.23 Aligned_cols=68 Identities=24% Similarity=0.282 Sum_probs=54.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec---CCcc-----ccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~---~d~~-----~~~~~D~Vi~~a~~ 152 (267)
++++|+|+|+|.+|+.+++.|.+. |++|+++++++++.+.+...++.... .+++ ...++|+||.+.+.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLAS--DIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 347899999999999999999999 99999999999887776666665543 3332 24689999988764
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=2.1e-05 Score=69.03 Aligned_cols=134 Identities=13% Similarity=0.051 Sum_probs=88.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh---hcc-----CeeeecCCc-----------cccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---INM-----GITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l---~~~-----~v~~d~~d~-----------~~~~~~D 144 (267)
|.+||||+ +-||++++++|.++ |.+|++.+|+.+....+ .+. .+.+|+.|+ +.+.+.|
T Consensus 8 KvalVTGas~GIG~aia~~la~~--Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD 85 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEE--RAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD 85 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 77999996 88999999999999 99999999987654322 111 234566554 2457899
Q ss_pred EEEEccCCCCCC--C-----hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSL--D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 145 ~Vi~~a~~~~~~--~-----~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
++||+||..... + |.+.+. ..+ +.. +..++|.+||...+... |. ..
T Consensus 86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~~~~~~~------------~~-~~ 151 (258)
T 4gkb_A 86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKA-TRGAIVNISSKTAVTGQ------------GN-TS 151 (258)
T ss_dssp EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCTHHHHCC------------SS-CH
T ss_pred EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-cCCeEEEEeehhhccCC------------CC-ch
Confidence 999999965321 1 111111 111 111 24799999998765321 11 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|...+.+.+.. + +-.+-|+.+.-+.
T Consensus 152 ~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~ 190 (258)
T 4gkb_A 152 GYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPL 190 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChh
Confidence 7999998887665432 3 6778999887654
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.22 E-value=8e-06 Score=72.41 Aligned_cols=136 Identities=15% Similarity=0.109 Sum_probs=87.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCc-----------cccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWT-----------EATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~-----------~~~~~~D~ 145 (267)
-|.+||||+ +-||++++++|.++ |++|++.+|+.+..++..+ . .+..|+.|+ +.+.+.|+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 367899996 78999999999999 9999999998776544321 1 234566654 24568999
Q ss_pred EEEccCCCCCC---C-----hHHHHH-------HHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 146 VIFCAPPSRSL---D-----YPGDVR-------LAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 146 Vi~~a~~~~~~---~-----~~~~~~-------~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
+|++||..... + |.+.+. .+..+.. ..+++|.+||...+... |. ...|
T Consensus 107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~------------~~-~~~Y 173 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT------------PA-FSVY 173 (273)
T ss_dssp EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC------------TT-CHHH
T ss_pred EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC------------CC-chHH
Confidence 99999865432 1 211111 1111111 23589999987654221 11 2479
Q ss_pred HHHHHHHHHHHHH----cC-----eeEEeeCccccCC
Q 024494 207 TDVLLKAEKVILE----FG-----GCVLRLAGLYISL 234 (267)
Q Consensus 207 ~~~k~~aE~~l~~----~~-----~~IlR~~~iyGp~ 234 (267)
+.+|...+.+-+. ++ +-.+-|+.+.-+.
T Consensus 174 ~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~ 210 (273)
T 4fgs_A 174 AASKAALRSFARNWILDLKDRGIRINTLSPGPTETTG 210 (273)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC--
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChh
Confidence 9999888766543 33 6678899887654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.20 E-value=3.3e-06 Score=76.60 Aligned_cols=96 Identities=15% Similarity=0.067 Sum_probs=60.4
Q ss_pred CCCeEEEEc-ccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCc--hhhhccCe--eeec----CCc-cccCCCCEEEEcc
Q 024494 83 GENDLLIVG-PGVLGRLVAEQWRQEHPG--CQIYGQTMTADHH--DELINMGI--TPSL----KWT-EATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~G-aG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~--~~l~~~~v--~~d~----~d~-~~~~~~D~Vi~~a 150 (267)
++|||+|+| +|++|+.++..|+++ | ++|+.++++++.. .++..... .... .|. +++.++|+|||++
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~--g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~a 84 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMN--PLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 84 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHC--TTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcC
Confidence 357999999 699999999999998 7 8999999876511 11222111 1111 122 4689999999999
Q ss_pred CCCCCC-----C----hHHHHHHHHH--HhCCCCcEEEEcC
Q 024494 151 PPSRSL-----D----YPGDVRLAAL--SWNGEGSFLFTSS 180 (267)
Q Consensus 151 ~~~~~~-----~----~~~~~~~l~~--~~~~v~r~V~~SS 180 (267)
+..... + +...+++++. ...+++.+|+++|
T Consensus 85 g~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~S 125 (326)
T 1smk_A 85 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLIS 125 (326)
T ss_dssp CCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 855321 1 2233444432 2235667777765
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.4e-05 Score=76.92 Aligned_cols=130 Identities=14% Similarity=0.111 Sum_probs=81.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEE-eCCCC-------------Cchh----hhccC-----eeeecCCcc-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQ-TMTAD-------------HHDE----LINMG-----ITPSLKWTE- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l-~R~~~-------------~~~~----l~~~~-----v~~d~~d~~- 138 (267)
+.+||||. |.||.+++++|.++ |++ |+.+ +|++. ...+ +...+ +.+|+.|.+
T Consensus 252 ~~vLITGgsgGIG~~lA~~La~~--G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~ 329 (525)
T 3qp9_A 252 GTVLVTGAEEPAAAEAARRLARD--GAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA 329 (525)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHc--CCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence 67999985 99999999999999 998 5555 78742 2222 22223 234566541
Q ss_pred ---------ccCCCCEEEEccCCCCCCC--------h-------HHHHHHHHH---Hh---CC-CCcEEEEcCCccc-cC
Q 024494 139 ---------ATQKFPYVIFCAPPSRSLD--------Y-------PGDVRLAAL---SW---NG-EGSFLFTSSSAIY-DC 186 (267)
Q Consensus 139 ---------~~~~~D~Vi~~a~~~~~~~--------~-------~~~~~~l~~---~~---~~-v~r~V~~SS~~VY-g~ 186 (267)
.....|.|||+|+...... + +.+..++.. .. .+ .++||++||...+ |.
T Consensus 330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 1246899999999654211 1 111222221 11 12 6789999997654 32
Q ss_pred CCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC-----eeEEeeCcc
Q 024494 187 SDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-----GCVLRLAGL 230 (267)
Q Consensus 187 ~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-----~~IlR~~~i 230 (267)
. +...|+.+|...+.+..+.. ++.+.|+.+
T Consensus 410 ~--------------g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 410 A--------------GQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp T--------------TCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred C--------------CCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 1 12479999998888776543 788999888
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.9e-06 Score=75.93 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=51.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|.+||.++|.|.+|..+++.|++. ||+|++++|++++.+.+.+.|....-...+...++|+||.|.+..
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~G~~~~~s~~e~~~~~dvvi~~l~~~ 72 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEA--GYELVVWNRTASKAEPLTKLGATVVENAIDAITPGGIVFSVLADD 72 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHT--TCEEEEC-------CTTTTTTCEECSSGGGGCCTTCEEEECCSSH
T ss_pred CCCcEEEEecHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCeEeCCHHHHHhcCCceeeeccch
Confidence 346899999999999999999999 999999999999988887777665433335778999999998753
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=98.17 E-value=1.6e-06 Score=77.71 Aligned_cols=69 Identities=19% Similarity=0.250 Sum_probs=56.0
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
..||+|.|+|+|.+|..+++.|.+. |++|++++|++++.+.+...++.......+.+.++|+||.|.+.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~ 87 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKN--GFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSD 87 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCC
Confidence 3568999999999999999999999 99999999999888777666655422222456789999998864
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=98.17 E-value=2.6e-06 Score=76.07 Aligned_cols=69 Identities=16% Similarity=0.195 Sum_probs=55.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC-ccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d-~~~~~~~D~Vi~~a~~~ 153 (267)
++|+|.|+|+|.+|..+++.|.+. |++|++++|++++.+.+.+.+......+ .+.+.++|+||.|.+..
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~ 75 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSCLRA--GLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNA 75 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCH
Confidence 357999999999999999999999 9999999999888777766665542233 35678899999998753
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.16 E-value=1.3e-06 Score=74.65 Aligned_cols=68 Identities=15% Similarity=0.210 Sum_probs=53.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEE-EeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~-l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+||+|.|+|+|.+|+.+++.|.+. |++|++ .+|++++.+.+.. .++.....+.+...++|+||.+.++
T Consensus 22 ~mmkI~IIG~G~mG~~la~~l~~~--g~~V~~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDvVilavp~ 91 (220)
T 4huj_A 22 SMTTYAIIGAGAIGSALAERFTAA--QIPAIIANSRGPASLSSVTDRFGASVKAVELKDALQADVVILAVPY 91 (220)
T ss_dssp GSCCEEEEECHHHHHHHHHHHHHT--TCCEEEECTTCGGGGHHHHHHHTTTEEECCHHHHTTSSEEEEESCG
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCCHHHHHHHHHHhCCCcccChHHHHhcCCEEEEeCCh
Confidence 368999999999999999999999 999999 8998887766542 3444333444557889999999864
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=98.16 E-value=1.5e-06 Score=73.94 Aligned_cols=68 Identities=13% Similarity=0.118 Sum_probs=53.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
.+|+|.|+|+|.+|+.+++.|.+. |++|++++|++++.+.+.+.++... ...+.+.++|+||.+.++.
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~~DvVi~av~~~ 94 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGS--GFKVVVGSRNPKRTARLFPSAAQVT-FQEEAVSSPEVIFVAVFRE 94 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHT--TCCEEEEESSHHHHHHHSBTTSEEE-EHHHHTTSCSEEEECSCGG
T ss_pred CCCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCcee-cHHHHHhCCCEEEECCChH
Confidence 357999999999999999999999 9999999998776655554455443 2224567899999999864
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.1e-06 Score=77.68 Aligned_cols=68 Identities=13% Similarity=0.149 Sum_probs=54.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
||+|.|+|+|.+|..+++.|.+. ||+|++++|++++.+.+.+.++.......+...++|+||.|.+..
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~ 68 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRA--GFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADP 68 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHH--TCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSH
T ss_pred CCeEEEEccCHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCH
Confidence 68999999999999999999999 999999999998887776556543222224567899999998753
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.6e-06 Score=75.92 Aligned_cols=68 Identities=9% Similarity=0.073 Sum_probs=51.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCC-------CchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTAD-------HHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~-------~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||+|.|+|+|.+|..++..|.+. | ++|++++|+++ ..+.+...++ ......+.+.++|+||.|.++.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-~~~s~~e~~~~aDvVi~avp~~ 98 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGR--NAARLAAYDLRFNDPAASGALRARAAELGV-EPLDDVAGIACADVVLSLVVGA 98 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECGGGGCTTTHHHHHHHHHHTTC-EEESSGGGGGGCSEEEECCCGG
T ss_pred cCCeEEEECccHHHHHHHHHHHHc--CCCeEEEEeCCCccccchHHHHHHHHHCCC-CCCCHHHHHhcCCEEEEecCCH
Confidence 568999999999999999999999 9 99999999872 2223333455 1102234677899999998765
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.13 E-value=8.3e-06 Score=77.17 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee-------------------ee-cCCc-cccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-------------------PS-LKWT-EATQK 142 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~-------------------~d-~~d~-~~~~~ 142 (267)
+|||.|+|+|++|..++..|.+. |++|++++|++++.+.+.. +.. .. ..|. +++.+
T Consensus 2 ~mkI~VIG~G~vG~~lA~~La~~--G~~V~~~D~~~~~v~~l~~-g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~ 78 (450)
T 3gg2_A 2 SLDIAVVGIGYVGLVSATCFAEL--GANVRCIDTDRNKIEQLNS-GTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPE 78 (450)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH-TCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHc-CCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhc
Confidence 48999999999999999999999 9999999999877665543 211 01 1233 35778
Q ss_pred CCEEEEccCCC
Q 024494 143 FPYVIFCAPPS 153 (267)
Q Consensus 143 ~D~Vi~~a~~~ 153 (267)
+|+||.|++..
T Consensus 79 aDvViiaVptp 89 (450)
T 3gg2_A 79 ADIIFIAVGTP 89 (450)
T ss_dssp CSEEEECCCCC
T ss_pred CCEEEEEcCCC
Confidence 99999999754
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.4e-06 Score=75.51 Aligned_cols=68 Identities=18% Similarity=0.339 Sum_probs=54.1
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||+|.|+|+ |.+|+.+++.|.+. |++|++++|++++.+.+...++... ...+.+.++|+||.|+++.
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~-~~~~~~~~aDvVi~av~~~ 78 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDS--AHHLAAIEIAPEGRDRLQGMGIPLT-DGDGWIDEADVVVLALPDN 78 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHS--SSEEEEECCSHHHHHHHHHTTCCCC-CSSGGGGTCSEEEECSCHH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHhcCCCcC-CHHHHhcCCCEEEEcCCch
Confidence 4689999999 99999999999999 9999999998877665554454332 2234667899999998764
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.7e-05 Score=70.95 Aligned_cols=32 Identities=16% Similarity=0.222 Sum_probs=29.0
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
+++||||+ |.||++++++|.++ |++|++++|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASA--GARVALGTWP 44 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTT--TCEEEEEECH
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHC--CCEEEEEecc
Confidence 67999985 89999999999999 9999999874
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=98.11 E-value=3.5e-06 Score=74.57 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-----------c-CCccc---cCCCCEEE
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-----------L-KWTEA---TQKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-----------~-~d~~~---~~~~D~Vi 147 (267)
+||+|.|+|+|.+|..++..|.+. |++|++++|++++.+.+.+.++... . .+.+. +.++|+||
T Consensus 2 ~~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGSRLGIMLHQG--GNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEE
T ss_pred CCCeEEEECcCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEE
Confidence 468999999999999999999999 9999999998877665554443321 0 11122 23899999
Q ss_pred EccCCC
Q 024494 148 FCAPPS 153 (267)
Q Consensus 148 ~~a~~~ 153 (267)
.|.++.
T Consensus 80 ~~v~~~ 85 (316)
T 2ew2_A 80 ALTKAQ 85 (316)
T ss_dssp ECSCHH
T ss_pred EEeccc
Confidence 998753
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.09 E-value=6.7e-05 Score=65.52 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=86.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhccC-----eeeecCCcc------ccCCCCEEEEcc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMG-----ITPSLKWTE------ATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~~~-----v~~d~~d~~------~~~~~D~Vi~~a 150 (267)
+.+||||+ +-||+++++.|.++ |.+|++.+|+... .+.+...+ +..|+.|++ ...+.|++||+|
T Consensus 10 KvalVTGas~GIG~aiA~~la~~--Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNNA 87 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAA--GAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNNA 87 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEECC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHc--CCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEECC
Confidence 77899996 88999999999999 9999999997542 12222233 334565542 234689999999
Q ss_pred CCCCCCC--------hHHHH-----------HHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 151 PPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 151 ~~~~~~~--------~~~~~-----------~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
|...... |.+.+ +.++ .+.....++|.+||...+... |. ...|..
T Consensus 88 Gi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------------~~-~~~Y~a 154 (247)
T 4hp8_A 88 GIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------------IR-VPSYTA 154 (247)
T ss_dssp CCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------SS-CHHHHH
T ss_pred CCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC------------CC-ChHHHH
Confidence 9754321 11111 1111 122235799999997654221 11 237999
Q ss_pred HHHHHHHHHHH----c---C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILE----F---G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~----~---~--~~IlR~~~iyGp~ 234 (267)
+|.....+-+. + + +-.+-|+.+--+.
T Consensus 155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~ 189 (247)
T 4hp8_A 155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNN 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGG
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcc
Confidence 99888766443 2 2 6678899887664
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=9.9e-06 Score=73.01 Aligned_cols=69 Identities=23% Similarity=0.467 Sum_probs=54.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeee-cCCc-c-ccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPS-LKWT-E-ATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d-~~d~-~-~~~~~D~Vi~~a~~~ 153 (267)
++|+|.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+...+.|+... ..+. + .+.++|+||.|+++.
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~~--G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVilavp~~ 105 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 105 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEECSCGG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEeCCHH
Confidence 458999999999999999999999 99 99999999877665555555321 2333 4 578999999998865
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.09 E-value=3.8e-06 Score=74.86 Aligned_cols=66 Identities=12% Similarity=0.076 Sum_probs=53.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+|+|.|+|+|.+|..+++.|.+. ||+|++++|++++.+.+.+.++.......+... +|+||.|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~ 80 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEW--PGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLD 80 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTS--TTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCC
Confidence 36899999999999999999999 999999999999887777666654222224556 9999999874
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=4.5e-06 Score=75.01 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=53.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCC--CCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA--DHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~--~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
||+|.|+|+|.+|..+++.|.+. |+ +|++++|++ ++.+.+...++.......+.+.++|+||.|.++..
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~--G~~~V~~~dr~~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~~ 95 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQA--GAIDMAAYDAASAESWRPRAEELGVSCKASVAEVAGECDVIFSLVTAQA 95 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHH--SCCEEEEECSSCHHHHHHHHHHTTCEECSCHHHHHHHCSEEEECSCTTT
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCCeEEEEcCCCCHHHHHHHHHCCCEEeCCHHHHHhcCCEEEEecCchh
Confidence 58999999999999999999999 99 999999974 55555555565442222245678999999987753
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.06 E-value=3.3e-06 Score=76.14 Aligned_cols=68 Identities=16% Similarity=0.162 Sum_probs=55.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
.+|+|.|+|+|.+|..+++.|.+. |++|++++|++++.+.+.+.++.......+.+.++|+||.|.+.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~ 97 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA--GYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLEN 97 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCC
Confidence 458999999999999999999999 99999999998887777665654432223467889999999864
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=8.3e-06 Score=76.61 Aligned_cols=67 Identities=15% Similarity=0.162 Sum_probs=50.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe------------------ee-ecCCc-cccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI------------------TP-SLKWT-EATQKFP 144 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v------------------~~-d~~d~-~~~~~~D 144 (267)
|+|.|+|+|++|..++..|.+. |++|++++|++++.+.+...+. .. ...+. +.+.++|
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~--G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 5899999999999999999999 9999999998877665543111 01 11233 3567899
Q ss_pred EEEEccCCC
Q 024494 145 YVIFCAPPS 153 (267)
Q Consensus 145 ~Vi~~a~~~ 153 (267)
+||.|++..
T Consensus 79 vviiaVptp 87 (436)
T 1mv8_A 79 VSFICVGTP 87 (436)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999999754
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=3e-06 Score=76.07 Aligned_cols=68 Identities=19% Similarity=0.240 Sum_probs=56.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
.|+||.++|.|.+|..++++|++. ||+|++++|++++.+.+...|....-.-.+...++|+||.|.+.
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~--G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~ 69 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPA 69 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSC
T ss_pred CcCEEEEeeehHHHHHHHHHHHhC--CCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCc
Confidence 478999999999999999999999 99999999999988888777765433323567889999999864
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=98.04 E-value=4e-06 Score=74.08 Aligned_cols=66 Identities=17% Similarity=0.323 Sum_probs=53.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|+|.|+|+|.+|..+++.|.+. |++|++++|++++.+.+.+.++.......+...++|+||.|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~ 67 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKA--GCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLAD 67 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCC
Confidence 7899999999999999999999 99999999999888777665654422222456789999999863
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=98.01 E-value=2.8e-06 Score=73.57 Aligned_cols=69 Identities=14% Similarity=0.233 Sum_probs=53.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC----eEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC----QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~----~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||||.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+.+.+ .++.......+...++|+||.|..+.
T Consensus 1 M~~~i~iIG~G~mG~~~a~~l~~~--g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~~~ 74 (247)
T 3gt0_A 1 MDKQIGFIGCGNMGMAMIGGMINK--NIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIKPD 74 (247)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHT--TSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSCTT
T ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeCHH
Confidence 468999999999999999999999 98 99999999887766643 35553222234567899999998543
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.00 E-value=4e-06 Score=76.88 Aligned_cols=67 Identities=19% Similarity=0.321 Sum_probs=51.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc--CeeeecCCc----cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM--GITPSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~--~v~~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.|||+|+|+|++|+.+++.|.+ .++|++.+++.++.+.+.+. .+..|+.|. +.+.++|+||+|+++.
T Consensus 16 ~mkilvlGaG~vG~~~~~~L~~---~~~v~~~~~~~~~~~~~~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~ 88 (365)
T 3abi_A 16 HMKVLILGAGNIGRAIAWDLKD---EFDVYIGDVNNENLEKVKEFATPLKVDASNFDKLVEVMKEFELVIGALPGF 88 (365)
T ss_dssp CCEEEEECCSHHHHHHHHHHTT---TSEEEEEESCHHHHHHHTTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred ccEEEEECCCHHHHHHHHHHhc---CCCeEEEEcCHHHHHHHhccCCcEEEecCCHHHHHHHHhCCCEEEEecCCc
Confidence 3799999999999999999865 48999999987766554432 233455554 3568999999999875
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.99 E-value=2.7e-06 Score=75.23 Aligned_cols=67 Identities=12% Similarity=0.241 Sum_probs=52.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
|+|+|.|+|+|.+|+.++..|.+. |++|++++|++++.+.+...++... .+. +.+.++|+||.|.+.
T Consensus 4 M~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~v~~ 71 (299)
T 1vpd_A 4 MTMKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAETA-STAKAIAEQCDVIITMLPN 71 (299)
T ss_dssp --CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred ccceEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHCCCeec-CCHHHHHhCCCEEEEECCC
Confidence 447999999999999999999999 9999999999877666655555432 232 345679999999874
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.99 E-value=3.8e-05 Score=73.17 Aligned_cols=70 Identities=11% Similarity=0.101 Sum_probs=52.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCC----CchhhhccC--e---e---------------e-ecCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD----HHDELINMG--I---T---------------P-SLKW 136 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~----~~~~l~~~~--v---~---------------~-d~~d 136 (267)
.+|||.|+|+|++|..++..|.+. ||| +|++++++++ +.+.+.... + + . .-.|
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~-~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd 95 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADA-PCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD 95 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHS-TTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHh-CCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc
Confidence 458999999999999999999987 589 9999999998 665554211 0 0 0 0123
Q ss_pred ccccCCCCEEEEccCCC
Q 024494 137 TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 137 ~~~~~~~D~Vi~~a~~~ 153 (267)
.+++.++|+||.|++..
T Consensus 96 ~ea~~~aDvViiaVptp 112 (478)
T 3g79_A 96 FSRISELDAVTLAIQTP 112 (478)
T ss_dssp GGGGGGCSEEEECCCCC
T ss_pred HHHHhcCCEEEEecCCc
Confidence 45678999999999854
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.97 E-value=3.1e-06 Score=75.82 Aligned_cols=69 Identities=19% Similarity=0.234 Sum_probs=54.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++|+|.|+|+|.+|..+++.|++. |++|++++|++++.+.+...++.......+.+.++|+||.|.+..
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDvVi~~vp~~ 76 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQ--GKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPATIFVLLDN 76 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSEEEECCSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEeCCH
Confidence 458999999999999999999999 999999999988777666556543222224567899999998753
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.97 E-value=4.1e-05 Score=68.59 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=59.6
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCC--eEEEEeC--CCCCchh----hhcc-----CeeeecCCccccCCCCEEEEcc
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGC--QIYGQTM--TADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~--~V~~l~R--~~~~~~~----l~~~-----~v~~d~~d~~~~~~~D~Vi~~a 150 (267)
|||+|+| +|++|++++..|+.+ ++ ++..+++ ++++.+. +... .+.....+.++++++|+|||++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeCCHHHhCCCCEEEEcC
Confidence 6899999 699999999999988 65 7888888 5433221 1110 1111113446789999999999
Q ss_pred CCCCCC-C--------hHHHHHHHHH--HhCCCCcEEEEcCC
Q 024494 151 PPSRSL-D--------YPGDVRLAAL--SWNGEGSFLFTSSS 181 (267)
Q Consensus 151 ~~~~~~-~--------~~~~~~~l~~--~~~~v~r~V~~SS~ 181 (267)
+..... . +...+++++. ...+++.+|+++|-
T Consensus 79 g~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 79 GIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 965432 1 1223444432 22356777777653
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.95 E-value=7.3e-06 Score=75.34 Aligned_cols=67 Identities=18% Similarity=0.216 Sum_probs=52.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcccc---CCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEAT---QKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~---~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|..+++.|.+. |++|++++|++++.+.+...++.......+.. +.+|+||.|.+..
T Consensus 23 mkIgiIGlG~mG~~~A~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~vp~~ 92 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLRKG--GHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLMVPAA 92 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEECSCGG
T ss_pred CEEEEECchHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEeCCHH
Confidence 7999999999999999999999 99999999998887777655654321111233 3459999998765
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.95 E-value=2.1e-05 Score=71.27 Aligned_cols=95 Identities=6% Similarity=-0.011 Sum_probs=60.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCC----CCCch----hhhcc--Ceeeec---CC-ccccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMT----ADHHD----ELINM--GITPSL---KW-TEATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~----~~~~~----~l~~~--~v~~d~---~d-~~~~~ 141 (267)
+|||+|+|+ |++|++++..|+.+ |+ +|..++++ .++.. ++... .+..++ .+ .+++.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~--~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~ 82 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANG--DMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFK 82 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhC--CCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhC
Confidence 379999997 99999999999988 75 89999887 33222 12211 112222 23 25789
Q ss_pred CCCEEEEccCCCCCC-C--------hHHHHHHHHH---HhC-CCCcEEEEcC
Q 024494 142 KFPYVIFCAPPSRSL-D--------YPGDVRLAAL---SWN-GEGSFLFTSS 180 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-~--------~~~~~~~l~~---~~~-~v~r~V~~SS 180 (267)
++|+|||+|+..... . +...+++++. +.+ ...+||++|.
T Consensus 83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 999999999965432 1 1222333332 233 3348898886
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.93 E-value=1.4e-05 Score=70.75 Aligned_cols=67 Identities=15% Similarity=0.258 Sum_probs=55.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC---eEEEEeCCCCCchhhhcc-CeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC---QIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~---~V~~l~R~~~~~~~l~~~-~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+|+|.|+|+|.+|..+++.|.+. |+ +|++.+|++++.+.+.+. ++.....+.+.+.++|+||.++.+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~--g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav~p 73 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIAN--GYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAVKP 73 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHT--TCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECSCG
T ss_pred CCEEEEEcccHHHHHHHHHHHHC--CCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEeCH
Confidence 47899999999999999999999 98 999999999887766543 665433334567899999999965
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=3.8e-05 Score=69.11 Aligned_cols=94 Identities=13% Similarity=0.052 Sum_probs=58.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeC--CCCCchh----hhc----cCeeeec---CC--ccccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTM--TADHHDE----LIN----MGITPSL---KW--TEATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R--~~~~~~~----l~~----~~v~~d~---~d--~~~~~~~D~V 146 (267)
|||+|+|+ |++|++++..|+.+ ++ ++..+++ ++++.+. +.. .+...++ .| .++++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~--~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhC--CCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEE
Confidence 58999997 99999999999988 64 6888887 4332211 111 1111222 22 4578999999
Q ss_pred EEccCCCCCC-C--------hHHHHHHHHH--HhCCCCcEEEEcCC
Q 024494 147 IFCAPPSRSL-D--------YPGDVRLAAL--SWNGEGSFLFTSSS 181 (267)
Q Consensus 147 i~~a~~~~~~-~--------~~~~~~~l~~--~~~~v~r~V~~SS~ 181 (267)
||+|+..... . +...+++++. ...+ +.+|+++|-
T Consensus 79 i~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SN 123 (313)
T 1hye_A 79 IITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITN 123 (313)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSS
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecC
Confidence 9999965421 1 2223334432 2235 777777764
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=67.38 Aligned_cols=66 Identities=14% Similarity=0.127 Sum_probs=51.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeee---ecCCcc-----ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP---SLKWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~---d~~d~~-----~~~~~D~Vi~~a~~ 152 (267)
|+|+|+|+|.+|+.+++.|.++ |++|+++++++++...+.. .++.. |..+++ ...++|+||.+.+.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~--g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSR--KYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHT--TCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 6899999999999999999999 9999999999887765542 34444 333331 36789999987654
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=97.89 E-value=9e-06 Score=76.90 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=51.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-Cee---eecCCc----cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-GIT---PSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-~v~---~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
|++|+|+|+|++|+++++.|.+. |++|++.+|++++...+.. . ++. .|+.|. +.+.++|+||||++..
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~--G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~ 79 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT 79 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTT--TCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--cCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence 47899999999999999999998 9999999998766554432 1 122 345443 3457899999999864
|
| >3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.89 E-value=4.1e-05 Score=68.75 Aligned_cols=71 Identities=14% Similarity=0.247 Sum_probs=51.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--------------cCCcccc-CCCCEEE
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--------------LKWTEAT-QKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--------------~~d~~~~-~~~D~Vi 147 (267)
|+|||+|+|+|-+|..++..|.+. |++|+.++|++. +.+.+.|+... ..+++.. .++|+||
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVi 76 (320)
T 3i83_A 1 MSLNILVIGTGAIGSFYGALLAKT--GHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSAAELETKPDCTL 76 (320)
T ss_dssp --CEEEEESCCHHHHHHHHHHHHT--TCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCGGGCSSCCSEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCHHHcCCCCCEEE
Confidence 458999999999999999999999 999999999762 44443333211 1233333 4899999
Q ss_pred EccCCCCCCC
Q 024494 148 FCAPPSRSLD 157 (267)
Q Consensus 148 ~~a~~~~~~~ 157 (267)
.+..+....+
T Consensus 77 lavK~~~~~~ 86 (320)
T 3i83_A 77 LCIKVVEGAD 86 (320)
T ss_dssp ECCCCCTTCC
T ss_pred EecCCCChHH
Confidence 9998765443
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.88 E-value=4.5e-05 Score=72.10 Aligned_cols=66 Identities=14% Similarity=0.155 Sum_probs=52.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee-------------------ee-cCCc-cccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-------------------PS-LKWT-EATQKF 143 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~-------------------~d-~~d~-~~~~~~ 143 (267)
.+|.|+|+|++|..++..|.+. ||+|++++|++++.+.+.. +.. .. ..|+ +++.++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~--G~~V~~~D~~~~kv~~l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~a 85 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDF--GHEVVCVDKDARKIELLHQ-NVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDA 85 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHTT-TCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTC
T ss_pred eEEEEEcCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHhc-CCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcC
Confidence 5899999999999999999999 9999999999998877654 211 01 1333 467899
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|+||.|++..
T Consensus 86 Dvvii~Vptp 95 (446)
T 4a7p_A 86 DAVFIAVGTP 95 (446)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEEcCCC
Confidence 9999998743
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.88 E-value=1.3e-05 Score=70.25 Aligned_cols=68 Identities=24% Similarity=0.489 Sum_probs=53.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeee-cCCc-cccC-CCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPS-LKWT-EATQ-KFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d-~~d~-~~~~-~~D~Vi~~a~~~ 153 (267)
||+|.|+|+|.+|..++..|.+. |+ +|++.+|++++.+.+...++... ..+. +.+. ++|+||.|+++.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~--g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~aDvVilavp~~ 73 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 73 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH
T ss_pred CcEEEEEecCHHHHHHHHHHHhc--CCCcEEEEEeCCHHHHHHHHHCCCcccccCCHHHHhcCCCCEEEEcCCHH
Confidence 57999999999999999999999 98 99999998776655544555321 2233 4567 899999998764
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=71.08 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=28.8
Q ss_pred CeEEEEcc---cHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGP---GVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~Ga---G~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
+++||||+ |.||++++++|+++ |++|++++|+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~--G~~Vv~~~r~ 44 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAA--GARVLVGTWP 44 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHT--TCEEEEEECH
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHC--CCEEEEEecc
Confidence 67999984 89999999999999 9999999864
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.88 E-value=2.7e-05 Score=74.14 Aligned_cols=71 Identities=11% Similarity=0.084 Sum_probs=52.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee-----------------ee-cCCc-cccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-----------------PS-LKWT-EATQKF 143 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~-----------------~d-~~d~-~~~~~~ 143 (267)
+||+|.|+|+|++|..++..|.+..+|++|++++|++++.+.+...+.. .. ..++ +.+.++
T Consensus 8 ~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~~a 87 (481)
T 2o3j_A 8 KVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEA 87 (481)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhhcC
Confidence 4689999999999999999999884458999999998776655431110 01 1232 346789
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|+||.|++..
T Consensus 88 Dvvii~Vptp 97 (481)
T 2o3j_A 88 DLIFISVNTP 97 (481)
T ss_dssp SEEEECCCCC
T ss_pred CEEEEecCCc
Confidence 9999998743
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.88 E-value=3.2e-05 Score=61.76 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=48.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC-CCchhhh---ccCeeee---cCCc----c-ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA-DHHDELI---NMGITPS---LKWT----E-ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~-~~~~~l~---~~~v~~d---~~d~----~-~~~~~D~Vi~~a~~ 152 (267)
++|+|+|+|.+|+.+++.|.+. |++|+++++++ ++.+.+. ..++... ..++ + .+.++|+||.+.+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~--g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHHC--CCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 6899999999999999999999 99999999975 3222222 2344443 3333 1 36789999988754
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.87 E-value=6.5e-06 Score=71.43 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCc-cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
||+|.|+|+|.+|+.+++.|.+. |++|.+.+|++++...+.+ .++.. ..+. +.+.++|+||.|.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~--g~~v~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~D~Vi~~v~~ 70 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPY-AMSHQDLIDQVDLVILGIKP 70 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCB-CSSHHHHHHTCSEEEECSCG
T ss_pred ccEEEEECCCHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHHcCCEe-eCCHHHHHhcCCEEEEEeCc
Confidence 58999999999999999999998 9999999998877655543 25442 2232 345689999999874
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=97.86 E-value=1.7e-05 Score=68.72 Aligned_cols=64 Identities=20% Similarity=0.317 Sum_probs=50.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
|+|.|+|+|.+|+.++..|.+. | ++|++++|++++.+.+.. .++.......+.+ ++|+||.|.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~~~~-~~D~vi~~v~ 66 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELGVETSATLPELH-SDDVLILAVK 66 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTCCEEESSCCCCC-TTSEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCeEEEECCCHHHHHHHHHhcCCEEeCCHHHHh-cCCEEEEEeC
Confidence 5899999999999999999999 9 999999999877766654 2555432222456 8999999886
|
| >3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.86 E-value=1.7e-05 Score=71.10 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=51.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC----------ccccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW----------TEATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d----------~~~~~~~D~Vi~~a~~ 152 (267)
|+|||+|+|+|-+|..++..|. . |++|+.++|++++.+.+.+.|+.....+ .+....+|+||.+..+
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~--g~~V~~~~r~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-L--YHDVTVVTRRQEQAAAIQSEGIRLYKGGEEFRADCSADTSINSDFDLLVVTVKQ 77 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCEEESSCCSCCSEEEECCCG
T ss_pred CCCEEEEECCCHHHHHHHHHHh-c--CCceEEEECCHHHHHHHHhCCceEecCCCeecccccccccccCCCCEEEEEeCH
Confidence 4689999999999999999999 8 9999999998766655655555443111 1245679999998765
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 78 ~ 78 (307)
T 3ego_A 78 H 78 (307)
T ss_dssp G
T ss_pred H
Confidence 3
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.86 E-value=1e-05 Score=71.27 Aligned_cols=65 Identities=22% Similarity=0.312 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
||+|.|+|+|.+|+.+++.|.+. |++|++++ ++++.+.+...++... .+. +.+.++|+||.|.+.
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~-~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~vp~ 68 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARA--GHQLHVTT-IGPVADELLSLGAVNV-ETARQVTEFADIIFIMVPD 68 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHT--TCEEEECC-SSCCCHHHHTTTCBCC-SSHHHHHHTCSEEEECCSS
T ss_pred CCEEEEEccCHHHHHHHHHHHhC--CCEEEEEc-CHHHHHHHHHcCCccc-CCHHHHHhcCCEEEEECCC
Confidence 58999999999999999999999 99999999 8777766655454322 222 345689999998854
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=97.85 E-value=1.8e-05 Score=75.08 Aligned_cols=68 Identities=9% Similarity=0.080 Sum_probs=50.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-------------------CeeeecCCc-cccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------------GITPSLKWT-EATQKF 143 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-------------------~v~~d~~d~-~~~~~~ 143 (267)
||+|.|+|+|++|..++..|.+..+|++|++++|++++.+.+... ++.. ..++ +.+.++
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~-t~~~~e~~~~a 83 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFF-STNIDDAIKEA 83 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEE-ESCHHHHHHHC
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEE-ECCHHHHHhcC
Confidence 579999999999999999999884469999999988766554321 1111 1232 356789
Q ss_pred CEEEEccCC
Q 024494 144 PYVIFCAPP 152 (267)
Q Consensus 144 D~Vi~~a~~ 152 (267)
|+||.|++.
T Consensus 84 DvViiaVpt 92 (467)
T 2q3e_A 84 DLVFISVNT 92 (467)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEcCC
Confidence 999999874
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.85 E-value=1.4e-05 Score=71.35 Aligned_cols=65 Identities=17% Similarity=0.223 Sum_probs=51.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
|+|.|+|+|.+|+.++..|.+. |++|++++|++++.+.+.+.++.......+.+.++|+||.|.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKM--GHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEECSSGGGGHHHHHTTCEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHcCCEEcCCHHHHHhcCCEEEEeCC
Confidence 7899999999999999999999 9999999999887766655555432122244567899999886
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.9e-05 Score=72.22 Aligned_cols=68 Identities=16% Similarity=0.129 Sum_probs=50.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe----------------eee-cCCc-cccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI----------------TPS-LKWT-EATQKFP 144 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v----------------~~d-~~d~-~~~~~~D 144 (267)
.||||.|+|+|++|..++..|. + |++|+++++++++.+.+..... ... ..|+ +++.++|
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La-~--G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIA-Q--NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred CCCEEEEECcCHHHHHHHHHHH-c--CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence 4689999999999999999775 5 8999999999887665543110 011 1233 4678999
Q ss_pred EEEEccCCC
Q 024494 145 YVIFCAPPS 153 (267)
Q Consensus 145 ~Vi~~a~~~ 153 (267)
+||.|++..
T Consensus 112 vViiaVPt~ 120 (432)
T 3pid_A 112 YVIIATPTD 120 (432)
T ss_dssp EEEECCCCE
T ss_pred EEEEeCCCc
Confidence 999998754
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=68.82 Aligned_cols=67 Identities=10% Similarity=0.084 Sum_probs=51.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---e----eeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---I----TPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v----~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|..++..|.+. |++|++++|++++...+...+ . .....+.+...++|+||.|.++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~v~~~ 74 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW 74 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG
T ss_pred CeEEEECcCHHHHHHHHHHHhC--CCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCccccCCCCEEEEEecHH
Confidence 5899999999999999999999 999999999987765443221 1 11123334567899999998765
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.82 E-value=1.8e-05 Score=68.78 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=52.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhhhcc-CeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l~~~-~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+|+|.|+|+|.+|+.+++.|.+. |++ |++++|++++.+.+... ++.......+.+.++|+||.+.++.
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~~~ 79 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRK--GFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLKDS 79 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCCHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecCHH
Confidence 47899999999999999999999 998 89999988776555432 5443222224567899999998754
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=1e-05 Score=71.46 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=51.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|+|.|+|+|.+|+.+++.|.+. |++|++++|++++.+.+.+.++.......+.+.++|+||.|.+.
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~~vp~ 66 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNLMKH--GYPLIIYDVFPDACKEFQDAGEQVVSSPADVAEKADRIITMLPT 66 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHHHT--TCCEEEECSSTHHHHHHHTTTCEECSSHHHHHHHCSEEEECCSS
T ss_pred CeEEEEeccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeecCCHHHHHhcCCEEEEeCCC
Confidence 5799999999999999999999 99999999998877666555554322212345678999888753
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.81 E-value=2.2e-05 Score=68.65 Aligned_cols=66 Identities=17% Similarity=0.297 Sum_probs=51.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee-ecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~-d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|+.+++.|.+. |++|++++|++++.+.+.+.++.. ...+. +. .++|+||.|+++.
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~av~~~ 68 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLCTPIQ 68 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEECSCHH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEECCHH
Confidence 5899999999999999999999 999999999887766555445431 12233 34 8899999998753
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.81 E-value=9.8e-06 Score=71.68 Aligned_cols=66 Identities=14% Similarity=0.275 Sum_probs=52.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
+|+|.|+|+|.+|+.+++.|.+. |++|++++|++++...+.+.++... .+. +.+.++|+||.|.+.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~D~vi~~vp~ 70 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKE--GVTVYAFDLMEANVAAVVAQGAQAC-ENNQKVAAASDIIFTSLPN 70 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHTTTCEEC-SSHHHHHHHCSEEEECCSS
T ss_pred CCEEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHCCCeec-CCHHHHHhCCCEEEEECCC
Confidence 47999999999999999999999 9999999998877666654455432 232 345679999999864
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=7.1e-06 Score=68.87 Aligned_cols=67 Identities=13% Similarity=0.141 Sum_probs=49.1
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-C-----eeeecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-----ITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~-----v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+|+|+| +|.+|+.+++.|.+. |++|++++|++++.+.+.+. + ......+. +.+.++|+||+++++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vi~~~~~~ 75 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWE 75 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHhccccccCCCChhhHHHHHhcCCEEEEeCChh
Confidence 5899999 899999999999999 99999999987665444321 2 01111222 3467899999998753
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=1.2e-05 Score=72.39 Aligned_cols=67 Identities=19% Similarity=0.291 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCC--CchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTAD--HHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~--~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+|+|.|+|+|.+|..++..|.+. | ++|++++|+++ +.+.+...|+.......+...++|+||.|+.+
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~--G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~~~~~e~~~~aDvVilav~~ 94 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAA--GVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKP 94 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHT--TSSCGGGEEEECSCTTSHHHHHHHHHTCEEESCHHHHHHHCSEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCCCcceEEEECCCccHHHHHHHHHcCCEEeCChHHHhccCCEEEEEeCH
Confidence 47899999999999999999999 8 89999999886 55555555655432223456789999999874
|
| >1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.2e-05 Score=70.89 Aligned_cols=68 Identities=15% Similarity=0.160 Sum_probs=52.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---------ee-cCCccccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---------PS-LKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---------~d-~~d~~~~~~~D~Vi~~a~~ 152 (267)
|.|||.|+|+|.+|..++..|.+. |++|++++|++++.+.+.+.+.. .. ..+++...++|+||.+..+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~--G~~V~~~~r~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~aDvVil~vk~ 90 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHEN--GEEVILWARRKEIVDLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPV 90 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHSCBTTBTTCCCCSEEESCGGGCCTTEEEEECSCG
T ss_pred cCCcEEEECcCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCcccCCCCeeeEEEeCCHHHhcCCCEEEEECCH
Confidence 558999999999999999999999 99999999987776666544421 11 1333236789999999865
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.79 E-value=3.2e-05 Score=63.42 Aligned_cols=68 Identities=18% Similarity=0.241 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCc----cc--cCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWT----EA--TQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~----~~--~~~~D~Vi~~a~~ 152 (267)
.++|+|+|+|.+|+.+++.|.+.. |++|+++++++++...+...++.. |..++ +. ..++|+||.+.+.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~-g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARY-GKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHH-CSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcc-CCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 368999999999999999998741 689999999988776665556543 33332 22 5789999998764
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.78 E-value=3.8e-05 Score=70.44 Aligned_cols=68 Identities=18% Similarity=0.261 Sum_probs=51.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee------------e-cCCc-cccCCCCEEEE
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP------------S-LKWT-EATQKFPYVIF 148 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~------------d-~~d~-~~~~~~D~Vi~ 148 (267)
++|||.|+|+|.+|..++..|.+. |++|+.++|+++..+.+...+.+. . ..|. +++.++|+||.
T Consensus 28 ~~mkI~VIGaG~mG~alA~~La~~--G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 28 FKHPIAILGAGSWGTALALVLARK--GQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHTT--TCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred cCCeEEEECccHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 357999999999999999999999 999999999877665554322111 1 1233 46789999999
Q ss_pred ccCC
Q 024494 149 CAPP 152 (267)
Q Consensus 149 ~a~~ 152 (267)
+.+.
T Consensus 106 aVp~ 109 (356)
T 3k96_A 106 VVPS 109 (356)
T ss_dssp CCCH
T ss_pred CCCH
Confidence 9865
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00012 Score=65.84 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=28.5
Q ss_pred CeEEEEccc---HHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG---~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+.+||||+| -||.+++++|.++ |++|+..+|++
T Consensus 3 k~~lITGas~~~GIG~aiA~~la~~--G~~Vv~~~~~~ 38 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPP 38 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECHH
T ss_pred cEEEEECCCCCCchHHHHHHHHHHC--CCEEEEEecCc
Confidence 679999974 7999999999999 99999777553
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.76 E-value=2.8e-05 Score=68.53 Aligned_cols=70 Identities=21% Similarity=0.320 Sum_probs=52.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee-ecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~-d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
||+|.|+|+|.+|+.++..|.+..+|++|++.+|++++.+.+...++.. ...+. +.+.++|+||.|+++.
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVilavp~~ 77 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILAVPIK 77 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEECSCHH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEcCCHH
Confidence 5899999999999999999998733479999999877665554445421 12232 3567899999998754
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.76 E-value=1.4e-05 Score=69.22 Aligned_cols=71 Identities=11% Similarity=0.151 Sum_probs=50.3
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC--------------chhhhc-cCeeeecCCccccCCCCEE
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--------------HDELIN-MGITPSLKWTEATQKFPYV 146 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~--------------~~~l~~-~~v~~d~~d~~~~~~~D~V 146 (267)
..+++|.|+|+|.+|+++++.|.+. |++|++.+|++++ ...+.. .+........+.+.++|+|
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDvV 94 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADL--GHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAELV 94 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSEE
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHC--CCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCEE
Confidence 4568999999999999999999999 9999999998765 222221 1211111112456789999
Q ss_pred EEccCCCC
Q 024494 147 IFCAPPSR 154 (267)
Q Consensus 147 i~~a~~~~ 154 (267)
|.|.++..
T Consensus 95 ilavp~~~ 102 (245)
T 3dtt_A 95 VNATEGAS 102 (245)
T ss_dssp EECSCGGG
T ss_pred EEccCcHH
Confidence 99997653
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.3e-05 Score=74.80 Aligned_cols=68 Identities=21% Similarity=0.189 Sum_probs=49.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC---CeEEEEeCCCCCchhhhcc-------Ce---eeecCCc----cccCC--CC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG---CQIYGQTMTADHHDELINM-------GI---TPSLKWT----EATQK--FP 144 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG---~~V~~l~R~~~~~~~l~~~-------~v---~~d~~d~----~~~~~--~D 144 (267)
|++|+|+|+|.+|+.+++.|.++ | .+|++.+|+.++...+... .+ ..|+.|. +.+.+ +|
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~--g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMN--REVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTC--TTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 68999999999999999999998 6 3999999998766544321 12 2344443 23333 89
Q ss_pred EEEEccCCC
Q 024494 145 YVIFCAPPS 153 (267)
Q Consensus 145 ~Vi~~a~~~ 153 (267)
+||+++++.
T Consensus 79 vVin~ag~~ 87 (405)
T 4ina_A 79 IVLNIALPY 87 (405)
T ss_dssp EEEECSCGG
T ss_pred EEEECCCcc
Confidence 999999864
|
| >3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.75 E-value=3.1e-05 Score=69.32 Aligned_cols=68 Identities=15% Similarity=0.130 Sum_probs=49.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-------------cCCccccCCCCEEEEc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-------------LKWTEATQKFPYVIFC 149 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-------------~~d~~~~~~~D~Vi~~ 149 (267)
|+|||+|+|+|-+|..++..|.+. |++|+.++|++ .+.+.+.|+... ..+++....+|+||.+
T Consensus 1 M~mkI~IiGaGaiG~~~a~~L~~~--g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~D~vila 76 (312)
T 3hn2_A 1 MSLRIAIVGAGALGLYYGALLQRS--GEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPEEIGPMDLVLVG 76 (312)
T ss_dssp ---CEEEECCSTTHHHHHHHHHHT--SCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHHHHCCCSEEEEC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHHHcCCCCEEEEe
Confidence 458999999999999999999999 99999999976 344544454321 1233445789999999
Q ss_pred cCCCC
Q 024494 150 APPSR 154 (267)
Q Consensus 150 a~~~~ 154 (267)
..+..
T Consensus 77 vk~~~ 81 (312)
T 3hn2_A 77 LKTFA 81 (312)
T ss_dssp CCGGG
T ss_pred cCCCC
Confidence 87654
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=6.3e-05 Score=71.62 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=51.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-------Cee-----------ee-cCCc-cccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------GIT-----------PS-LKWT-EATQKF 143 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-------~v~-----------~d-~~d~-~~~~~~ 143 (267)
.|||.|+|+|++|..++..|.+. ||+|+++++++++.+.+... ++. .. ..|+ +.+.++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~--G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADI--GHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred CceEEEECcCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 48999999999999999999999 99999999998776665432 111 01 1233 346789
Q ss_pred CEEEEccCC
Q 024494 144 PYVIFCAPP 152 (267)
Q Consensus 144 D~Vi~~a~~ 152 (267)
|+||.|++.
T Consensus 86 DvviiaVpt 94 (478)
T 2y0c_A 86 DVQFIAVGT 94 (478)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEeCC
Confidence 999999975
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.74 E-value=9.3e-05 Score=69.83 Aligned_cols=67 Identities=18% Similarity=0.227 Sum_probs=52.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe----eee----------------cCCc-cccC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI----TPS----------------LKWT-EATQ 141 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v----~~d----------------~~d~-~~~~ 141 (267)
.|.+|.|+|+||+|..++..|.+. ||+|+++|.++++.+.+.. |. ++. ..+. +++.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~--G~~V~g~Did~~kV~~ln~-G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALL--GHRVVGYDVNPSIVERLRA-GRPHIYEPGLEEALGRALSSGRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHT-TCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhC--CCcEEEEECCHHHHHHHHC-CCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHh
Confidence 578999999999999999999999 9999999999887766542 21 110 0122 3567
Q ss_pred CCCEEEEccCC
Q 024494 142 KFPYVIFCAPP 152 (267)
Q Consensus 142 ~~D~Vi~~a~~ 152 (267)
.+|++|.|++.
T Consensus 97 ~ad~~~I~VpT 107 (444)
T 3vtf_A 97 ATDATFIAVGT 107 (444)
T ss_dssp TSSEEEECCCC
T ss_pred cCCceEEEecC
Confidence 89999999984
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=1.4e-05 Score=72.88 Aligned_cols=65 Identities=12% Similarity=0.154 Sum_probs=49.3
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee------------ee-cCCc-cccCCCCEEEEccC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT------------PS-LKWT-EATQKFPYVIFCAP 151 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~------------~d-~~d~-~~~~~~D~Vi~~a~ 151 (267)
+|.|+|+|.+|..++..|.+. |++|++++|++++.+.+...+.. .. ..++ +...++|+||.|.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~ 94 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP 94 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCC
T ss_pred eEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCC
Confidence 999999999999999999999 99999999987766555432210 11 1233 34678999999986
Q ss_pred C
Q 024494 152 P 152 (267)
Q Consensus 152 ~ 152 (267)
+
T Consensus 95 ~ 95 (366)
T 1evy_A 95 T 95 (366)
T ss_dssp H
T ss_pred h
Confidence 5
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=5.2e-05 Score=67.03 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=51.5
Q ss_pred CCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cC---eeeecCCc----cccCCCCEEEEcc
Q 024494 84 ENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG---ITPSLKWT----EATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~---v~~d~~d~----~~~~~~D~Vi~~a 150 (267)
.+++||+| +|.+|+++++.|.++ |++|++++|+.++.+++.+ .+ +..|+.|. +.+.++|+|||++
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~--G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 37899999 699999999999999 9999999998765543321 12 23455553 3467799999999
Q ss_pred CCC
Q 024494 151 PPS 153 (267)
Q Consensus 151 ~~~ 153 (267)
+..
T Consensus 197 g~g 199 (287)
T 1lu9_A 197 AIG 199 (287)
T ss_dssp CTT
T ss_pred Ccc
Confidence 854
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.69 E-value=4.1e-05 Score=70.20 Aligned_cols=68 Identities=13% Similarity=0.076 Sum_probs=50.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC-------CeEEEEeCCCC-----CchhhhccC--------ee----ee-cCCc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD-----HHDELINMG--------IT----PS-LKWT 137 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG-------~~V~~l~R~~~-----~~~~l~~~~--------v~----~d-~~d~ 137 (267)
|||||.|+|+|.+|..++..|.+. | ++|++++|+++ +.+.+...+ .. .. ..++
T Consensus 20 ~~~kI~iIGaG~mG~alA~~L~~~--G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~ 97 (375)
T 1yj8_A 20 GPLKISILGSGNWASAISKVVGTN--AKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHSDL 97 (375)
T ss_dssp SCBCEEEECCSHHHHHHHHHHHHH--HHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEESST
T ss_pred CCCEEEEECcCHHHHHHHHHHHHc--CCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEECCH
Confidence 467999999999999999999999 9 99999999887 554443211 10 11 1233
Q ss_pred -cccCCCCEEEEccCC
Q 024494 138 -EATQKFPYVIFCAPP 152 (267)
Q Consensus 138 -~~~~~~D~Vi~~a~~ 152 (267)
+...++|+||.+.++
T Consensus 98 ~ea~~~aDvVilav~~ 113 (375)
T 1yj8_A 98 ASVINDADLLIFIVPC 113 (375)
T ss_dssp HHHHTTCSEEEECCCH
T ss_pred HHHHcCCCEEEEcCCH
Confidence 356789999999865
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00031 Score=62.98 Aligned_cols=70 Identities=11% Similarity=0.104 Sum_probs=50.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhh----hcc------Ceeeec-CCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----INM------GITPSL-KWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l----~~~------~v~~d~-~d~~~~~~~D~Vi~~a 150 (267)
|||||.|+|+|.+|..++..|... |+ +|+.+++++++.+.. ... ..+... .|.+++.++|+||.++
T Consensus 1 M~~kI~VIGaG~vG~~~a~~la~~--g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 1 MRKKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTS 78 (309)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCHHHHCCCCEEEEcC
Confidence 458999999999999999999998 87 999999887655321 110 111111 4456789999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+...
T Consensus 79 g~p~ 82 (309)
T 1ur5_A 79 GAPR 82 (309)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8654
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=3.1e-05 Score=67.87 Aligned_cols=66 Identities=12% Similarity=0.095 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
||+|.|+|+|.+|..+++.|.+ |++|++++|++++.+.+.+.++...- ..+.+.++|+||.|.+..
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~---g~~V~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~D~vi~~v~~~ 66 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR---RFPTLVWNRTFEKALRHQEEFGSEAV-PLERVAEARVIFTCLPTT 66 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT---TSCEEEECSSTHHHHHHHHHHCCEEC-CGGGGGGCSEEEECCSSH
T ss_pred CCeEEEEcccHHHHHHHHHHhC---CCeEEEEeCCHHHHHHHHHCCCcccC-HHHHHhCCCEEEEeCCCh
Confidence 5789999999999999999975 78999999998776655443443322 224567899999998753
|
| >3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.67 E-value=4.3e-05 Score=69.05 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee------------cCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS------------LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d------------~~d~~~~~~~D~Vi~~a~ 151 (267)
+|||+|+|+|.+|..++..|.+. |++|+.++|+ +..+.+.+.++... ..+++...++|+||.|..
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~--g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~Vilavk 79 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALA--GEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAAALGEQDVVIVAVK 79 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHT--TCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHHHHCCCSEEEECCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHHHcCCCCEEEEeCC
Confidence 48999999999999999999999 9999999996 44444544454331 123344578999999986
Q ss_pred C
Q 024494 152 P 152 (267)
Q Consensus 152 ~ 152 (267)
.
T Consensus 80 ~ 80 (335)
T 3ghy_A 80 A 80 (335)
T ss_dssp H
T ss_pred c
Confidence 5
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=97.66 E-value=6.5e-05 Score=68.08 Aligned_cols=68 Identities=16% Similarity=0.219 Sum_probs=53.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|.|+|+|.||+.+++.|... |++|++.+|++++.......++... +. +.+.++|+|+.+++...
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~--~l~e~l~~aDvVi~~vp~~~ 222 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPF--GVQRFLYTGRQPRPEEAAEFQAEFV--STPELAAQSDFIVVACSLTP 222 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG--TCCEEEEESSSCCHHHHHTTTCEEC--CHHHHHHHCSEEEECCCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcchhHHHhcCceeC--CHHHHHhhCCEEEEeCCCCh
Confidence 347999999999999999999999 9999999998765544443454433 33 45678999999998653
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00022 Score=64.72 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=51.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc------CeeeecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM------GITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~------~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
++||.|+|+|.+|+.++..|... |+ +|+.+++++++.+. +... ++.....+.+++.++|+||++++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~--~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQ--GITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTYEDCKDADIVCICAG 82 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcHHHhCCCCEEEEecc
Confidence 47999999999999999999998 86 99999998765433 2211 12222234467899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 83 ~p~ 85 (326)
T 3pqe_A 83 ANQ 85 (326)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.66 E-value=4e-05 Score=69.13 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=51.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-Ceee-------------ecCCc-cccCCCCEEEE
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITP-------------SLKWT-EATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~-------------d~~d~-~~~~~~D~Vi~ 148 (267)
+|+|.|+|+|.+|..++..|.+. |++|++++|++++.+.+.+. ++.. ...+. +.+.++|+||.
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 37999999999999999999999 99999999987766555433 2211 11233 34678999999
Q ss_pred ccCCC
Q 024494 149 CAPPS 153 (267)
Q Consensus 149 ~a~~~ 153 (267)
|++..
T Consensus 82 ~v~~~ 86 (359)
T 1bg6_A 82 VVPAI 86 (359)
T ss_dssp CSCGG
T ss_pred eCCch
Confidence 98754
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=7.1e-05 Score=66.97 Aligned_cols=69 Identities=14% Similarity=-0.014 Sum_probs=52.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhhc-c---------CeeeecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELIN-M---------GITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~~-~---------~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
||||.|+|+|.+|..++..|.+. | ++|+.++|++++...+.. . .+.....|.+.+.++|+||.+++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~--g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~aDvViiav~ 78 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLG 78 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeCCHHHhCCCCEEEEecC
Confidence 58999999999999999999999 8 899999998765543321 0 12221245567889999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
...
T Consensus 79 ~~~ 81 (309)
T 1hyh_A 79 NIK 81 (309)
T ss_dssp CGG
T ss_pred Ccc
Confidence 643
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=5.8e-05 Score=67.10 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=35.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~ 123 (267)
.|++|.|+|+|.+|..++..|.+. |++|++++|++++.+
T Consensus 14 ~~~~I~VIG~G~mG~~iA~~la~~--G~~V~~~d~~~~~~~ 52 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDILA 52 (302)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhC--CCeEEEEECCHHHHH
Confidence 357899999999999999999999 999999999876554
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00035 Score=63.27 Aligned_cols=71 Identities=14% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchh----hhcc------Ceeee-cCCccccCCCCEEEEc
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LINM------GITPS-LKWTEATQKFPYVIFC 149 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~----l~~~------~v~~d-~~d~~~~~~~D~Vi~~ 149 (267)
..++||.|+|+|.+|..++..|... |+ +|+.+++++++.+. +... ..... ..|.+++.++|+||.+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~--~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~~a~~~aDiVIia 82 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLK--ELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVT 82 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSGGGGTTCSEEEEC
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCHHHHCCCCEEEEc
Confidence 3457999999999999999999999 88 99999998876531 2110 12222 1455789999999999
Q ss_pred cCCCC
Q 024494 150 APPSR 154 (267)
Q Consensus 150 a~~~~ 154 (267)
++..+
T Consensus 83 ag~p~ 87 (324)
T 3gvi_A 83 AGVPR 87 (324)
T ss_dssp CSCCC
T ss_pred cCcCC
Confidence 98553
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.64 E-value=2.1e-05 Score=62.28 Aligned_cols=69 Identities=14% Similarity=0.175 Sum_probs=52.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeee-cCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPS-LKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d-~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|.+|+.+++.|.+. |++|++++|++++...+.. .+.... ..+. +.+.++|+||.+.+...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~--g~~v~v~~r~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Divi~at~~~~ 92 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYP--QYKVTVAGRNIDHVRAFAEKYEYEYVLINDIDSLIKNNDVIITATSSKT 92 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTT--TCEEEEEESCHHHHHHHHHHHTCEEEECSCHHHHHHTCSEEEECSCCSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHHhCCceEeecCHHHHhcCCCEEEEeCCCCC
Confidence 37999999999999999999998 9999999999877655432 343322 2332 45678999999988653
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.64 E-value=3.7e-05 Score=68.82 Aligned_cols=67 Identities=9% Similarity=0.067 Sum_probs=51.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC--CCCCchhhhccCee---------eec-C--Cc-cccCCCCEEEEc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMGIT---------PSL-K--WT-EATQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R--~~~~~~~l~~~~v~---------~d~-~--d~-~~~~~~D~Vi~~ 149 (267)
|+|.|+|+|.+|..++..|.+. |++|++++| ++++.+.+...+.. ... . +. +...++|+||.|
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~ 78 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEc
Confidence 5899999999999999999999 999999999 77666555443321 011 1 33 346789999999
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
.++.
T Consensus 79 v~~~ 82 (335)
T 1txg_A 79 VSTD 82 (335)
T ss_dssp SCGG
T ss_pred CChH
Confidence 8765
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=4.3e-05 Score=67.45 Aligned_cols=68 Identities=24% Similarity=0.260 Sum_probs=50.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-------------Cee-----------eecCCc-c
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------------GIT-----------PSLKWT-E 138 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-------------~v~-----------~d~~d~-~ 138 (267)
+++|.|+|+|.+|+.++..|.+. |++|++++|+++..+..... ++. ....+. +
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~ 81 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFH--GFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQ 81 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHH
Confidence 47899999999999999999999 99999999987765433221 110 011233 3
Q ss_pred ccCCCCEEEEccCCC
Q 024494 139 ATQKFPYVIFCAPPS 153 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~ 153 (267)
.+.++|+||.+++..
T Consensus 82 ~~~~aDlVi~av~~~ 96 (283)
T 4e12_A 82 AVKDADLVIEAVPES 96 (283)
T ss_dssp HTTTCSEEEECCCSC
T ss_pred HhccCCEEEEeccCc
Confidence 578999999998764
|
| >3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.62 E-value=6.8e-05 Score=67.36 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=50.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee------------cCCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS------------LKWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d------------~~d~~~~~~~D~Vi~~a 150 (267)
.+|||+|+|+|.+|..++..|.+. |++|+.+ ++++..+.+.+.+.... ..+.+...++|+||.+.
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~--G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~D~vilav 94 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARA--GHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSAVQGADLVLFCV 94 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHT--TCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGGGTTCSEEEECC
T ss_pred cCCcEEEECcCHHHHHHHHHHHHC--CCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHHcCCCCEEEEEc
Confidence 458999999999999999999999 9999999 77666555544443321 12334567899999998
Q ss_pred CCC
Q 024494 151 PPS 153 (267)
Q Consensus 151 ~~~ 153 (267)
...
T Consensus 95 k~~ 97 (318)
T 3hwr_A 95 KST 97 (318)
T ss_dssp CGG
T ss_pred ccc
Confidence 764
|
| >3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00012 Score=68.75 Aligned_cols=67 Identities=22% Similarity=0.378 Sum_probs=50.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eeec----------CC---ccccCCCCEEEE
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPSL----------KW---TEATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d~----------~d---~~~~~~~D~Vi~ 148 (267)
.|+-|+|+|++|..++..|.+. ||+|+++++++++.+.+..... ++.+ .. .....++|+||.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~--G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~ttd~~~aDvvii 89 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKH--GVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVSTTPEASDVFII 89 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESSCCCCSEEEE
T ss_pred CccEEEeeCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeCchhhCCEEEE
Confidence 6799999999999999999999 9999999999988777653211 0100 00 012468999999
Q ss_pred ccCCC
Q 024494 149 CAPPS 153 (267)
Q Consensus 149 ~a~~~ 153 (267)
|++..
T Consensus 90 ~VpTp 94 (431)
T 3ojo_A 90 AVPTP 94 (431)
T ss_dssp CCCCC
T ss_pred EeCCC
Confidence 99854
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.79 E-value=7.8e-06 Score=69.03 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
+.|+|.|+|+|.+|+.+++.|.+. |++|++++|+++ ...+...++... ...+.+.++|+||.+.++..
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~~--G~~V~~~~r~~~-~~~~~~~g~~~~-~~~~~~~~aDvVilav~~~~ 85 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQC--GYSVVFGSRNPQ-VSSLLPRGAEVL-CYSEAASRSDVIVLAVHREH 85 (201)
Confidence 457899999999999999999999 999999999876 333333344332 22346678999999988653
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.60 E-value=3.1e-05 Score=67.15 Aligned_cols=64 Identities=19% Similarity=0.305 Sum_probs=48.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC--CCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM--TADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R--~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|..+++.|.+. |++|++.+| +++..+.+...++. .++ +.+.++|+||.|.++.
T Consensus 1 M~I~iIG~G~mG~~la~~l~~~--g~~V~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~aDvvi~~v~~~ 67 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGVT---ETSEEDVYSCPVVISAVTPG 67 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTCE---ECCHHHHHTSSEEEECSCGG
T ss_pred CeEEEEechHHHHHHHHHHHHC--CCeEEEeCCccCHHHHHHHHHCCCc---CCHHHHHhcCCEEEEECCCH
Confidence 5899999999999999999999 999999877 33333444434554 333 3467899999998764
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.58 E-value=2.8e-05 Score=73.91 Aligned_cols=70 Identities=14% Similarity=0.154 Sum_probs=52.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCee---eecCCc----cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGIT---PSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~---~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.|++|+|+|+|.+|+.+++.|.+. +|++|++.+|++++...+.. .++. .|+.|. +.+.++|+||+|++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~-~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~ 99 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAAN-DDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT 99 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTS-TTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred CCCEEEEECChHHHHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence 457899999999999999999987 26899999999877655532 2332 344443 2456899999999864
|
| >3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.58 E-value=5e-05 Score=67.37 Aligned_cols=70 Identities=17% Similarity=0.118 Sum_probs=49.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCcccc-CCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWTEAT-QKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~~~~-~~~D~Vi~~a~~~~ 154 (267)
|+|||+|+|+|-+|..++..|.+. |++|+.++|+++........+.. ....+.+.. ..+|+||.+..+..
T Consensus 1 M~mkI~iiGaGa~G~~~a~~L~~~--g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~D~vilavk~~~ 74 (294)
T 3g17_A 1 MSLSVAIIGPGAVGTTIAYELQQS--LPHTTLIGRHAKTITYYTVPHAPAQDIVVKGYEDVTNTFDVIIIAVKTHQ 74 (294)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHH--CTTCEEEESSCEEEEEESSTTSCCEEEEEEEGGGCCSCEEEEEECSCGGG
T ss_pred CCcEEEEECCCHHHHHHHHHHHHC--CCeEEEEEeccCcEEEEecCCeeccceecCchHhcCCCCCEEEEeCCccC
Confidence 458999999999999999999999 99999999986554322122211 111122333 78999999987653
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00025 Score=63.22 Aligned_cols=70 Identities=20% Similarity=0.276 Sum_probs=50.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCch--hhh-ccC------eeeec-CCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHD--ELI-NMG------ITPSL-KWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~--~l~-~~~------v~~d~-~d~~~~~~~D~Vi~~a 150 (267)
++|||.|+|+|.+|..++..|... |+ +|+.++|++++.. .+. ..+ ..... .+.+.+.++|+||.++
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~~~--g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~aD~Vii~v 83 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITA 83 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeCCCHHHhCCCCEEEECC
Confidence 458999999999999999999999 98 9999999865443 111 111 11111 2445678999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+...
T Consensus 84 ~~~~ 87 (319)
T 1lld_A 84 GPRQ 87 (319)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 7543
|
| >2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.58 E-value=6.3e-05 Score=65.06 Aligned_cols=61 Identities=11% Similarity=0.169 Sum_probs=47.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC----CeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG----CQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG----~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
+|+|.|+|+|.+|+.++..|.+. | ++|++++|++++ .++... .+. +...++|+||.|+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~--g~~~~~~v~~~~~~~~~------~g~~~~-~~~~~~~~~~D~vi~~v~~~ 69 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANA--NIIKKENLFYYGPSKKN------TTLNYM-SSNEELARHCDIIVCAVKPD 69 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHH--TSSCGGGEEEECSSCCS------SSSEEC-SCHHHHHHHCSEEEECSCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCCCCCeEEEEeCCccc------CceEEe-CCHHHHHhcCCEEEEEeCHH
Confidence 47999999999999999999999 8 799999998765 243321 222 3456799999998754
|
| >1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=8.3e-05 Score=69.14 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=49.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee----------------e-cCCc-cccCCCCEE
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----------------S-LKWT-EATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~----------------d-~~d~-~~~~~~D~V 146 (267)
|+|.|+|+|++|..++..|.+ ||+|++++|++++.+.+...+... . ..++ +.+.++|+|
T Consensus 1 MkI~VIG~G~vG~~~A~~La~---G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~~~~aDvv 77 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL---QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAELV 77 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT---TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSEE
T ss_pred CEEEEECCCHHHHHHHHHHhC---CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHHhcCCCEE
Confidence 589999999999999999974 799999999987776665433210 1 1232 346689999
Q ss_pred EEccCCC
Q 024494 147 IFCAPPS 153 (267)
Q Consensus 147 i~~a~~~ 153 (267)
|.|++..
T Consensus 78 iiavpt~ 84 (402)
T 1dlj_A 78 IIATPTN 84 (402)
T ss_dssp EECCCCC
T ss_pred EEecCCC
Confidence 9999865
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00017 Score=60.91 Aligned_cols=50 Identities=20% Similarity=0.306 Sum_probs=41.0
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
..+|+|.|+|+|.+|+.++..|.+. |++|++++|+++ .+.++|+||.+.+
T Consensus 17 ~~~~~I~iiG~G~mG~~la~~l~~~--g~~V~~~~~~~~------------------~~~~aD~vi~av~ 66 (209)
T 2raf_A 17 FQGMEITIFGKGNMGQAIGHNFEIA--GHEVTYYGSKDQ------------------ATTLGEIVIMAVP 66 (209)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHT--TCEEEEECTTCC------------------CSSCCSEEEECSC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHH------------------HhccCCEEEEcCC
Confidence 3468999999999999999999999 999999999765 2456788887775
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00096 Score=60.26 Aligned_cols=69 Identities=14% Similarity=0.132 Sum_probs=52.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchh----hhcc------Ceeee-cCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDE----LINM------GITPS-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~----l~~~------~v~~d-~~d~~~~~~~D~Vi~~a~ 151 (267)
++||.|+|+|.+|..++..|... |. +|+.+++++++... +... ..... ..|.+++.++|+||.+++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~--~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d~~a~~~aDvVIi~ag 82 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIK--QLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTNDYKDLENSDVVIVTAG 82 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCCHHHHCCCCEEEEcCC
Confidence 58999999999999999999998 77 99999998876432 2211 11222 134578899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 83 ~p~ 85 (321)
T 3p7m_A 83 VPR 85 (321)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00012 Score=68.46 Aligned_cols=66 Identities=17% Similarity=0.222 Sum_probs=53.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC---cc-----ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---TE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d---~~-----~~~~~D~Vi~~a~~ 152 (267)
++|+|+|+|.+|+.+++.|.++ |++|++++++++..+.+...++.....| ++ -+.++|+||.+.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~--g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSS--GVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSS
T ss_pred CeEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCC
Confidence 7899999999999999999999 9999999999988877766666554333 32 35789999988754
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00017 Score=66.09 Aligned_cols=69 Identities=16% Similarity=0.221 Sum_probs=53.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|... |++|++.+|++...+.....++... .+. +.+.++|+|+.+++...
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~~Plt~ 232 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPF--GCNLLYHDRLQMAPELEKETGAKFV-EDLNEMLPKCDVIVINMPLTE 232 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG--CCEEEEECSSCCCHHHHHHHCCEEC-SCHHHHGGGCSEEEECSCCCT
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHC--CCEEEEeCCCccCHHHHHhCCCeEc-CCHHHHHhcCCEEEECCCCCH
Confidence 348999999999999999999999 9999999998755444444455432 222 46788999999988653
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0001 Score=66.85 Aligned_cols=66 Identities=15% Similarity=0.172 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
+|+|.|+|+|.+|..++..|.+. |++|++.+|+++. .......|+... +. +.+.++|+||.++++.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~--G~~V~~~~~~~~~~~~~a~~~G~~~~--~~~e~~~~aDvVilavp~~ 83 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAHGLKVA--DVKTAVAAADVVMILTPDE 83 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHTTCEEE--CHHHHHHTCSEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHHC--cCEEEEEECChHHHHHHHHHCCCEEc--cHHHHHhcCCEEEEeCCcH
Confidence 47899999999999999999999 9999999998765 333333465443 33 4567899999998764
|
| >2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.49 E-value=6.1e-05 Score=66.77 Aligned_cols=71 Identities=13% Similarity=0.216 Sum_probs=51.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhc--CC-C-CeEEEEeCCCCCchhhhc-cCeeeec-------------CCccccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQE--HP-G-CQIYGQTMTADHHDELIN-MGITPSL-------------KWTEATQKFP 144 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~--~p-G-~~V~~l~R~~~~~~~l~~-~~v~~d~-------------~d~~~~~~~D 144 (267)
+||+|.|+|+|.+|..++..|.+. .+ | ++|++++| +++.+.+.+ .++...- .+.+...++|
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~D 85 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNPAEVGTVD 85 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCHHHHCCEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCccccCCCC
Confidence 347999999999999999999865 01 5 89999999 655555555 4554321 2223467899
Q ss_pred EEEEccCCCC
Q 024494 145 YVIFCAPPSR 154 (267)
Q Consensus 145 ~Vi~~a~~~~ 154 (267)
+||.|..+..
T Consensus 86 ~vil~vk~~~ 95 (317)
T 2qyt_A 86 YILFCTKDYD 95 (317)
T ss_dssp EEEECCSSSC
T ss_pred EEEEecCccc
Confidence 9999988754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00055 Score=66.95 Aligned_cols=128 Identities=14% Similarity=0.102 Sum_probs=77.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC---------CCchh----hhccC--eeeecCCc-----------
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---------DHHDE----LINMG--ITPSLKWT----------- 137 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~---------~~~~~----l~~~~--v~~d~~d~----------- 137 (267)
+.++|||+ +-||++++++|.++ |++|++.+|+. +..+. +...+ ...|..|.
T Consensus 9 kvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKL--GAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHc--CCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 67899997 78999999999999 99999998764 22222 22122 22344432
Q ss_pred cccCCCCEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccc-cCCCCCccCCC
Q 024494 138 EATQKFPYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIY-DCSDNGACDED 195 (267)
Q Consensus 138 ~~~~~~D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VY-g~~~~~~~~E~ 195 (267)
+.+...|++||+||..... + +...+ +.++ +...+.+++|.+||..-+ +..
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~-------- 158 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF-------- 158 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC--------
Confidence 2346899999999965321 1 11111 1111 112245799999997543 321
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeC
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLA 228 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~ 228 (267)
. ...|+.+|...+.+.+.. + +..+-|+
T Consensus 159 -----~-~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 159 -----G-QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp -----T-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred -----C-chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 1 247999998887654432 3 5667775
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0001 Score=65.53 Aligned_cols=56 Identities=25% Similarity=0.208 Sum_probs=44.6
Q ss_pred CCCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+|++|.|+| +|.+|..++..|.+. |++|++++|+++.. ..+.+.++|+||.|+++.
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~--G~~V~~~~~~~~~~-------------~~~~~~~aDvVilavp~~ 76 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAV-------------AESILANADVVIVSVPIN 76 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGG-------------HHHHHTTCSEEEECSCGG
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhC--CCeEEEEECCcccC-------------HHHHhcCCCEEEEeCCHH
Confidence 457999999 999999999999999 99999999876421 113456788888887654
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00034 Score=66.71 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=52.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC---eeee-cCCc----cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG---ITPS-LKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~---v~~d-~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.||+|.|+|+|.+|..++..|.+. ||+|++.+|++++.+.+.+.+ .... ..++ +.++++|+||.++++.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCCEEEEEChhHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence 358999999999999999999999 999999999998877665432 2221 1222 2345799999998775
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.47 E-value=4.8e-05 Score=69.42 Aligned_cols=67 Identities=12% Similarity=0.272 Sum_probs=52.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cc----cCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EA----TQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~----~~~~D~Vi~~a~~~ 153 (267)
+++|.|+|+|.+|..+++.|.+. |++|++++|+++..+.....|+... .+. +. ..++|+||.|+++.
T Consensus 8 ~~kIgIIG~G~mG~slA~~L~~~--G~~V~~~dr~~~~~~~a~~~G~~~~-~~~~e~~~~a~~~aDlVilavP~~ 79 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDLHAA--NHSVFGYNRSRSGAKSAVDEGFDVS-ADLEATLQRAAAEDALIVLAVPMT 79 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHTTCCEE-SCHHHHHHHHHHTTCEEEECSCHH
T ss_pred CCEEEEEeecHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeee-CCHHHHHHhcccCCCEEEEeCCHH
Confidence 47899999999999999999999 9999999999877665555666432 222 22 23689999998753
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00029 Score=63.43 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=48.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCc--hhhhccCe--eeec----CCcc-ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHH--DELINMGI--TPSL----KWTE-ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~--~~l~~~~v--~~d~----~d~~-~~~~~D~Vi~~a~~ 152 (267)
|||.|+|+ |++|+.++..|..+ | ++|..+++++... .++..... .... .|.+ ++.++|+||++++.
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~--~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~ 78 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGV 78 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSC
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCc
Confidence 58999997 99999999999988 7 7999999986211 12221111 1111 2443 68999999999986
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 79 ~~ 80 (314)
T 1mld_A 79 PR 80 (314)
T ss_dssp CC
T ss_pred CC
Confidence 53
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00025 Score=67.43 Aligned_cols=66 Identities=15% Similarity=0.232 Sum_probs=51.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCeeeecCCc-cc---cCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-EA---TQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~~d~~d~-~~---~~~~D~Vi~~a~~~ 153 (267)
|+|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+.. .++.. ..++ +. ++++|+||.+++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~g~gi~~-~~~~~e~v~~l~~aDvVilaVp~~ 77 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVLG-AHSLEEMVSKLKKPRRIILLVKAG 77 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEE-CSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CeEEEEChHHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhccccCCCeEE-eCCHHHHHhhccCCCEEEEeCCCh
Confidence 6899999999999999999999 9999999999887766654 33332 2233 22 35899999998764
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00013 Score=65.27 Aligned_cols=66 Identities=14% Similarity=0.160 Sum_probs=51.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-------CeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-------GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-------~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
.++|.|+|+|.+|..++..|+ . |++|++.+|+++..+..... ++... .+++.+.++|+||-|++..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-a--G~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~aDlVieavpe~ 84 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-S--KHEVVLQDVSEKALEAAREQIPEELLSKIEFT-TTLEKVKDCDIVMEAVFED 84 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-T--TSEEEEECSCHHHHHHHHHHSCGGGGGGEEEE-SSCTTGGGCSEEEECCCSC
T ss_pred CCeEEEEeeCHHHHHHHHHHH-c--CCEEEEEECCHHHHHHHHHHHHHHHhCCeEEe-CCHHHHcCCCEEEEcCcCC
Confidence 389999999999999999999 8 99999999998776554433 33322 2333478999999998654
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00015 Score=63.77 Aligned_cols=69 Identities=17% Similarity=0.214 Sum_probs=52.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|-+|+.++..|.+. |++|++.+|++++.+.+.. .++...-...+.+.++|+||++.+...
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~--g~~V~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~aDiVi~atp~~~ 198 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKE--GAKVFLWNRTKEKAIKLAQKFPLEVVNSPEEVIDKVQVIVNTTSVGL 198 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSHHHHHHHTTTSCEEECSCGGGTGGGCSEEEECSSTTS
T ss_pred CCEEEEECchHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHcCCeeehhHHhhhcCCCEEEEeCCCCC
Confidence 37899999999999999999999 9999999999876655542 243321111245678999999998764
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00062 Score=73.83 Aligned_cols=131 Identities=11% Similarity=-0.002 Sum_probs=80.8
Q ss_pred CeEEEEcc-cH-HhHHHHHHHHhcCCCCeEEEE-eCCCCCchh----hh-c---cC-----eeeecCCcc----------
Q 024494 85 NDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LI-N---MG-----ITPSLKWTE---------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~-IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~----l~-~---~~-----v~~d~~d~~---------- 138 (267)
+.+||||+ |- ||++++++|+++ |++|+++ .|+.+.... +. . .+ +.+|+.|.+
T Consensus 676 KvaLVTGASsGgIG~aIA~~La~~--GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~ 753 (1887)
T 2uv8_A 676 KYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 753 (1887)
T ss_dssp CEEEEESCCSSSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 67999996 77 999999999999 9999998 465544322 11 0 12 234555531
Q ss_pred -c-----cC-CCCEEEEccCCCCCC-C---h---HHHHH-----------HHHHHh--C------CCCcEEEEcCCcccc
Q 024494 139 -A-----TQ-KFPYVIFCAPPSRSL-D---Y---PGDVR-----------LAALSW--N------GEGSFLFTSSSAIYD 185 (267)
Q Consensus 139 -~-----~~-~~D~Vi~~a~~~~~~-~---~---~~~~~-----------~l~~~~--~------~v~r~V~~SS~~VYg 185 (267)
. .. ..|+|||+||..... . . .+... .+.... . +.++||++||...+.
T Consensus 754 ~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~ 833 (1887)
T 2uv8_A 754 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF 833 (1887)
T ss_dssp SCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCS
T ss_pred HhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhcc
Confidence 2 22 699999999965332 1 0 11111 111111 1 125899999976432
Q ss_pred CCCCCccCCCCCCCCCCCCHHHHHHHHHHHH-HH----HcC----eeEEeeCcccc
Q 024494 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKV-IL----EFG----GCVLRLAGLYI 232 (267)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~-l~----~~~----~~IlR~~~iyG 232 (267)
. . ...|+.+|...+.+ .+ +++ +..+.||.+.+
T Consensus 834 g------------g---~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 834 G------------G---DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp S------------C---BTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred C------------C---CchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 1 0 23699999988876 22 222 67789999884
|
| >2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00027 Score=67.59 Aligned_cols=68 Identities=13% Similarity=0.173 Sum_probs=52.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCeeeecCCc-cc---cCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGITPSLKWT-EA---TQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~~d~~d~-~~---~~~~D~Vi~~a~~~ 153 (267)
|..+|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+.. .++... .++ +. ++++|+||.+++..
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~~~~~gi~~~-~s~~e~v~~l~~aDvVil~Vp~~ 85 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADH--GFTVCAYNRTQSKVDHFLANEAKGKSIIGA-TSIEDFISKLKRPRKVMLLVKAG 85 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSHHHHHHHHTTTTTSSEECC-SSHHHHHHTSCSSCEEEECCCSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHcccccCCCeEEe-CCHHHHHhcCCCCCEEEEEcCCh
Confidence 347899999999999999999999 9999999999988776654 244321 222 22 34599999998764
|
| >1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0005 Score=65.06 Aligned_cols=66 Identities=14% Similarity=0.147 Sum_probs=49.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----------cC-----------eeeecCCccccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MG-----------ITPSLKWTEATQ 141 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----------~~-----------v~~d~~d~~~~~ 141 (267)
+++|.|+|+|.+|..++..|.+. |++|++++++++..+.... .+ ... ..+.+.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~~ 113 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKELS 113 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGGT
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHHC
Confidence 57899999999999999999999 9999999998765432211 01 011 23445678
Q ss_pred CCCEEEEccCC
Q 024494 142 KFPYVIFCAPP 152 (267)
Q Consensus 142 ~~D~Vi~~a~~ 152 (267)
++|+||.+++.
T Consensus 114 ~aDlVIeaVpe 124 (463)
T 1zcj_A 114 TVDLVVEAVFE 124 (463)
T ss_dssp TCSEEEECCCS
T ss_pred CCCEEEEcCCC
Confidence 99999999864
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00062 Score=61.71 Aligned_cols=69 Identities=16% Similarity=0.137 Sum_probs=51.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc-----CeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
++||.|+|+|.+|+.++..|+.. |. +|+.+++++++.+. +... .+.....+.+++.++|+||++++.
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~~~a~~~aDiVvi~ag~ 86 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECcHHHhcCCCEEEECCCC
Confidence 47999999999999999999998 76 89999997664432 2111 122222345688999999999986
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 87 ~~ 88 (326)
T 3vku_A 87 PQ 88 (326)
T ss_dssp C-
T ss_pred CC
Confidence 53
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00012 Score=62.45 Aligned_cols=64 Identities=11% Similarity=-0.060 Sum_probs=50.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee---cCCcc-----ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS---LKWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d---~~d~~-----~~~~~D~Vi~~a~~ 152 (267)
++|+|+|+|.+|+.+++.|.+. |+ |++++++++..+.+. .++... ..+++ .+.++|.||.+.+.
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~--g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGS--EV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTS--EE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CEEEEECCChHHHHHHHHHHhC--Ce-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 7899999999999999999999 99 999999987766554 455443 33332 36789999988654
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00014 Score=66.60 Aligned_cols=91 Identities=14% Similarity=0.062 Sum_probs=54.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCC-----CCeEEEEeCC--CCC-chh----hhc-cCeeeecCCccccCCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHP-----GCQIYGQTMT--ADH-HDE----LIN-MGITPSLKWTEATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~p-----G~~V~~l~R~--~~~-~~~----l~~-~~v~~d~~d~~~~~~~D~Vi~~ 149 (267)
|+||+|+|+ |++|+.|++.|.++ | ..+|+.+.+. ..+ ... +.. ..+...-.+++.+.++|+||.|
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~-~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~a 87 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGH-PAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTEAAVLGGHDAVFLA 87 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-HHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECCHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCCHHHhcCCCEEEEC
Confidence 579999995 99999999999887 3 3588887643 222 221 111 1111111233445689999999
Q ss_pred cCCCCCCChHHHHHHHHHHhCCCCcEEEEcCCc
Q 024494 150 APPSRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (267)
Q Consensus 150 a~~~~~~~~~~~~~~l~~~~~~v~r~V~~SS~~ 182 (267)
++.....++. .. . ..| .++|-+|+..
T Consensus 88 lg~~~s~~~~----~~-~-~~G-~~vIDlSa~~ 113 (352)
T 2nqt_A 88 LPHGHSAVLA----QQ-L-SPE-TLIIDCGADF 113 (352)
T ss_dssp CTTSCCHHHH----HH-S-CTT-SEEEECSSTT
T ss_pred CCCcchHHHH----HH-H-hCC-CEEEEECCCc
Confidence 8865422111 11 1 224 5788888764
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00031 Score=74.46 Aligned_cols=131 Identities=11% Similarity=0.001 Sum_probs=79.3
Q ss_pred CeEEEEcc-cH-HhHHHHHHHHhcCCCCeEEEE-eCCCCCchh----hhc----cC-----eeeecCCcc----------
Q 024494 85 NDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQ-TMTADHHDE----LIN----MG-----ITPSLKWTE---------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~-IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~----l~~----~~-----v~~d~~d~~---------- 138 (267)
+.+||||+ |. ||++++++|+++ |++|+++ .|+.+...+ +.. .+ +.+|+.|.+
T Consensus 477 KvALVTGASgGGIGrAIAr~LA~~--GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~ 554 (1688)
T 2pff_A 477 KYVLITGAGKGSIGAEVLQGLLQG--GAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIY 554 (1688)
T ss_dssp CCEEECSCSSSSTHHHHHHHHHHH--TCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHHC--cCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 67999996 77 999999999999 9999998 566544322 211 02 234555531
Q ss_pred -c-----cC-CCCEEEEccCCCCCC----Ch---HHHHH-----------HHHHH---h-----CCCCcEEEEcCCcccc
Q 024494 139 -A-----TQ-KFPYVIFCAPPSRSL----DY---PGDVR-----------LAALS---W-----NGEGSFLFTSSSAIYD 185 (267)
Q Consensus 139 -~-----~~-~~D~Vi~~a~~~~~~----~~---~~~~~-----------~l~~~---~-----~~v~r~V~~SS~~VYg 185 (267)
. .. ..|+|||+||..... +. .+... .+... . .+..+||++||...+.
T Consensus 555 e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~ 634 (1688)
T 2pff_A 555 DTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTF 634 (1688)
T ss_dssp SCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTS
T ss_pred HhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhcc
Confidence 1 22 689999999964322 10 11111 11111 1 1125899999965432
Q ss_pred CCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH-----cC----eeEEeeCcccc
Q 024494 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILE-----FG----GCVLRLAGLYI 232 (267)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~-----~~----~~IlR~~~iyG 232 (267)
. . ...|+.+|...+.+... ++ +..+.|+.+.|
T Consensus 635 G-------------g--~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 635 G-------------G--DGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp S-------------C--BTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred C-------------C--chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 1 0 23699999999887332 12 45577887774
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00022 Score=65.05 Aligned_cols=91 Identities=14% Similarity=0.019 Sum_probs=53.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cC-eeeecCCccccCCCCEEEEccCCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MG-ITPSLKWTEATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~-v~~d~~d~~~~~~~D~Vi~~a~~~~~~ 156 (267)
|+||.|+|+ |++|+.+++.|.++ |..+|+++.+.......+.. .+ ......+.+.+.++|+||.|++.....
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~-p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~vDvV~~a~g~~~s~ 82 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSH-PYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPEKLEPADILVLALPHGVFA 82 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTC-TTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGGGCCCCSEEEECCCTTHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHcC-CCcEEEEEECchhhCchhHHhCchhcCcccccccchhHhcCCCEEEEcCCcHHHH
Confidence 478999995 99999999999876 56798888764332211111 01 011112221247899999998765311
Q ss_pred ChHHHHHHHHHHhCCCCcEEEEcCC
Q 024494 157 DYPGDVRLAALSWNGEGSFLFTSSS 181 (267)
Q Consensus 157 ~~~~~~~~l~~~~~~v~r~V~~SS~ 181 (267)
++ .... ...| .++|-+|+.
T Consensus 83 ~~---a~~~--~~aG-~~VId~Sa~ 101 (345)
T 2ozp_A 83 RE---FDRY--SALA-PVLVDLSAD 101 (345)
T ss_dssp HT---HHHH--HTTC-SEEEECSST
T ss_pred HH---HHHH--HHCC-CEEEEcCcc
Confidence 11 1111 1224 468888874
|
| >2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00023 Score=67.79 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=51.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----CeeeecCCc-ccc---CCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EAT---QKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~d~~d~-~~~---~~~D~Vi~~a~~~ 153 (267)
.++|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+... ++... .++ +.. +++|+||.++++.
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~--G~~V~v~~r~~~~~~~l~~~~~~~gi~~~-~s~~e~v~~l~~aDvVil~Vp~~ 89 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESR--GYTVSIFNRSREKTEEVIAENPGKKLVPY-YTVKEFVESLETPRRILLMVKAG 89 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTT--TCCEEEECSSHHHHHHHHHHSTTSCEEEC-SSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCeEEEEccHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHHHhhCCCCCeEEe-CCHHHHHhCCCCCCEEEEECCCH
Confidence 37899999999999999999999 99999999998877666532 44332 232 233 3599999999774
|
| >1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00032 Score=63.29 Aligned_cols=67 Identities=16% Similarity=0.181 Sum_probs=49.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC-------CeEEEEeCCCC-----CchhhhccC--------ee----ee-cCCc-
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD-----HHDELINMG--------IT----PS-LKWT- 137 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG-------~~V~~l~R~~~-----~~~~l~~~~--------v~----~d-~~d~- 137 (267)
+|+|.|+|+|.+|..++..|.+. | ++|++++|+++ ....+...+ .. .. ..+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~--g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGN--AAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVV 85 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHH--HHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhc--CCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCHH
Confidence 36999999999999999999999 9 99999999887 444433211 10 11 1233
Q ss_pred cccCCCCEEEEccCC
Q 024494 138 EATQKFPYVIFCAPP 152 (267)
Q Consensus 138 ~~~~~~D~Vi~~a~~ 152 (267)
+...++|+||.|.++
T Consensus 86 ~~~~~aD~Vilav~~ 100 (354)
T 1x0v_A 86 QAAEDADILIFVVPH 100 (354)
T ss_dssp HHHTTCSEEEECCCG
T ss_pred HHHcCCCEEEEeCCH
Confidence 356789999999865
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00012 Score=66.72 Aligned_cols=68 Identities=12% Similarity=0.118 Sum_probs=42.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhc-CCCCeEEEEe-CC-CCCchhhhccCeeeecC--CccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQT-MT-ADHHDELINMGITPSLK--WTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~-~pG~~V~~l~-R~-~~~~~~l~~~~v~~d~~--d~~~~~~~D~Vi~~a~~~ 153 (267)
+|||+|+|+ |++|+.|++.|.++ +|..+++.+. ++ ..+.-.+ .+....+. +++...++|+||.|.+..
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~--~g~~i~~~~~~~~~~~~~DvV~~a~g~~ 79 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGF--AESSLRVGDVDSFDFSSVGLAFFAAAAE 79 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEE--TTEEEECEEGGGCCGGGCSEEEECSCHH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcccc--CCcceEEecCCHHHhcCCCEEEEcCCcH
Confidence 378999995 99999999999854 2455677664 32 2221111 12222221 233456899999998643
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.001 Score=60.15 Aligned_cols=68 Identities=12% Similarity=0.090 Sum_probs=50.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhh----c----cCe--eeec-CCcc-ccCCCCEEEEcc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N----MGI--TPSL-KWTE-ATQKFPYVIFCA 150 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~----~----~~v--~~d~-~d~~-~~~~~D~Vi~~a 150 (267)
+|||.|+|+|.+|..++..|... |+ +|+.+++++++.+... . ... +... .|.+ ++.++|+||.++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~--g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTA 86 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEcc
Confidence 47999999999999999999999 98 9999999887654311 0 111 1111 4443 789999999999
Q ss_pred CCC
Q 024494 151 PPS 153 (267)
Q Consensus 151 ~~~ 153 (267)
+..
T Consensus 87 g~p 89 (331)
T 1pzg_A 87 GLT 89 (331)
T ss_dssp SCS
T ss_pred CCC
Confidence 643
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0011 Score=59.66 Aligned_cols=69 Identities=10% Similarity=0.080 Sum_probs=47.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc-----CeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
++||.|+|+|++|..++-.|... +. +|..+|.++++.+. +... .++....+.+++.++|+||.+++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~--~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~~g~ 84 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGA 84 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 47899999999999999999998 77 99999998765432 1111 111122345678999999999986
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 85 p~ 86 (318)
T 1y6j_A 85 NR 86 (318)
T ss_dssp --
T ss_pred CC
Confidence 54
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00023 Score=62.45 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCe--eeecCCcccc--CCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGI--TPSLKWTEAT--QKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v--~~d~~d~~~~--~~~D~Vi~~a~~~~ 154 (267)
.++++|+|+|-+|+.++..|.+. |++|++++|++++...+.+ .+. ..+..+.+.+ .++|+||++++...
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~--G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSGI 192 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCCC
Confidence 47899999999999999999999 9999999999776655432 111 2222232222 58999999998653
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00024 Score=63.94 Aligned_cols=68 Identities=15% Similarity=0.000 Sum_probs=51.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhc---c------CeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELIN---M------GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~---~------~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|..++..|... |+ +|+.+++++++...+.. . .......|.+.+.++|+||.+++..
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~--g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~d~~~~~~aDvViiav~~~ 78 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVP 78 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeCCHHHhCCCCEEEEccCCC
Confidence 6899999999999999999999 99 99999998765443221 0 1112223456788999999999865
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 79 ~ 79 (319)
T 1a5z_A 79 Q 79 (319)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00023 Score=63.30 Aligned_cols=69 Identities=17% Similarity=0.281 Sum_probs=52.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-cCCc-cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
..++|+|+|+|.+|+.+++.|... |.+|++.+|++++...+.+.++... ..+. +.+.++|+|+.+++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~~ 226 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAAL--GANVKVGARSSAHLARITEMGLVPFHTDELKEHVKDIDICINTIPSM 226 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCEEEEGGGHHHHSTTCSEEEECCSSC
T ss_pred CCCEEEEEcccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHCCCeEEchhhHHHHhhCCCEEEECCChh
Confidence 348999999999999999999999 9999999998765544433454431 2222 4578999999998863
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00017 Score=65.40 Aligned_cols=68 Identities=18% Similarity=0.221 Sum_probs=52.6
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|+|.||+.+++.|... |++|++.+|+++. ......++.. .+. +.+.++|+|+.+++...
T Consensus 148 l~g~~vgIIG~G~iG~~iA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~--~~l~~~l~~aDvVil~vp~~~ 216 (334)
T 2dbq_A 148 VYGKTIGIIGLGRIGQAIAKRAKGF--NMRILYYSRTRKE-EVERELNAEF--KPLEDLLRESDFVVLAVPLTR 216 (334)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHHCCEE--CCHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEEccCHHHHHHHHHHHhC--CCEEEEECCCcch-hhHhhcCccc--CCHHHHHhhCCEEEECCCCCh
Confidence 3458999999999999999999999 9999999998765 3322334433 233 45678999999998764
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0013 Score=58.89 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=50.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc------Ceeeec-CCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM------GITPSL-KWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~------~v~~d~-~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|..++..|....-|++|+.+++++++.+.+. .. ...... .|.+.+.++|+||.+++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~l~~aDvViiav~~p 80 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAGLP 80 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHHHCCCCEEEEeCCCC
Confidence 589999999999999999988511799999999987654331 10 111111 4445589999999999854
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 81 ~ 81 (310)
T 1guz_A 81 R 81 (310)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00026 Score=63.58 Aligned_cols=68 Identities=15% Similarity=0.058 Sum_probs=52.3
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|+++. ......++... +. +.+.++|+|+.+.+...
T Consensus 140 l~g~~vgIiG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~ell~~aDvV~l~~p~~~ 208 (307)
T 1wwk_A 140 LEGKTIGIIGFGRIGYQVAKIANAL--GMNILLYDPYPNE-ERAKEVNGKFV--DLETLLKESDVVTIHVPLVE 208 (307)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCH-HHHHHTTCEEC--CHHHHHHHCSEEEECCCCST
T ss_pred cCCceEEEEccCHHHHHHHHHHHHC--CCEEEEECCCCCh-hhHhhcCcccc--CHHHHHhhCCEEEEecCCCh
Confidence 3347999999999999999999999 9999999998765 22333455432 33 45678999999988654
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00066 Score=59.92 Aligned_cols=67 Identities=18% Similarity=0.217 Sum_probs=52.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++++|+|+|-.|++++..|.+. |.+|++.+|++++.+.+.+.++... ..+.+.++|+||++.+...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~--G~~v~V~nRt~~ka~~la~~~~~~~--~~~~l~~~DiVInaTp~Gm 184 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQ--GLQVSVLNRSSRGLDFFQRLGCDCF--MEPPKSAFDLIINATSASL 184 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCTTHHHHHHHTCEEE--SSCCSSCCSEEEECCTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHCCCeEe--cHHHhccCCEEEEcccCCC
Confidence 47899999999999999999999 9999999999998877654343332 1122348999999987653
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0013 Score=59.29 Aligned_cols=68 Identities=15% Similarity=0.153 Sum_probs=50.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhc------cCeeee-cCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPS-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~------~~v~~d-~~d~~~~~~~D~Vi~~a~ 151 (267)
|||.|+|+|.+|+.++..|+.. |. +|+.+++++++.+. +.. ...... ..+.+++.++|+||.+++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~--~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQ--DVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSSGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCHHHhCCCCEEEECCC
Confidence 6899999999999999999998 76 99999998876432 211 011222 134578999999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 79 ~~~ 81 (314)
T 3nep_X 79 LPR 81 (314)
T ss_dssp C--
T ss_pred CCC
Confidence 654
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0021 Score=62.82 Aligned_cols=128 Identities=14% Similarity=0.074 Sum_probs=77.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhccCe-----eeec-CCc--------cccCCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGI-----TPSL-KWT--------EATQKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~~~v-----~~d~-~d~--------~~~~~~D~Vi 147 (267)
+.++|||+ +-||++++++|.++ |++|++.+|.... ..++...+. ..|+ .+. +...+.|++|
T Consensus 323 kvalVTGas~GIG~a~A~~la~~--Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLV 400 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKY--GAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILV 400 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CeEEEECcchHHHHHHHHHHHHC--CCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEE
Confidence 67899997 78999999999999 9999999864321 122222221 2234 222 2346899999
Q ss_pred EccCCCCCC---C-----hHHH-------H----HHHH--HHhCCCCcEEEEcCCccc-cCCCCCccCCCCCCCCCCCCH
Q 024494 148 FCAPPSRSL---D-----YPGD-------V----RLAA--LSWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 148 ~~a~~~~~~---~-----~~~~-------~----~~l~--~~~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~~~~~ 205 (267)
|+||..... + +... . +.++ +...+.+++|++||..-+ +.. . ...
T Consensus 401 nNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~-------------~-~~~ 466 (604)
T 2et6_A 401 NNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNF-------------G-QAN 466 (604)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCT-------------T-BHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCC-------------C-Chh
Confidence 999965321 1 1111 1 1111 122345799999997543 321 1 247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLA 228 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~ 228 (267)
|+.+|...+.+.+.. + +..+-|+
T Consensus 467 Y~asKaal~~lt~~la~El~~~gIrVn~v~PG 498 (604)
T 2et6_A 467 YSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH 498 (604)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEcCC
Confidence 999998887654432 3 5667786
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0018 Score=58.42 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhh----hc----c--Ceeeec-CCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDEL----IN----M--GITPSL-KWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l----~~----~--~v~~d~-~d~~~~~~~D~Vi~~a~ 151 (267)
++||.|+|+|.+|..++..|... |+ +|+.+++++++.+.. .. . ..+... .|.+++.++|+||.+++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~--g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 47999999999999999999999 88 999999987755321 11 0 111111 44567899999999997
Q ss_pred CC
Q 024494 152 PS 153 (267)
Q Consensus 152 ~~ 153 (267)
..
T Consensus 82 ~p 83 (322)
T 1t2d_A 82 FT 83 (322)
T ss_dssp CS
T ss_pred CC
Confidence 44
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00029 Score=62.50 Aligned_cols=68 Identities=18% Similarity=0.305 Sum_probs=52.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-cCCc-cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~~d~-~~~~~~D~Vi~~a~~ 152 (267)
..++|+|+|+|-+|+.+++.|... |.+|++.+|++++...+...++... ..+. +.+.++|+|+.+++.
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~--G~~V~~~dr~~~~~~~~~~~g~~~~~~~~l~~~l~~aDvVi~~~p~ 223 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAAL--GAKVKVGARESDLLARIAEMGMEPFHISKAAQELRDVDVCINTIPA 223 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTSEEEEGGGHHHHTTTCSEEEECCSS
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHCCCeecChhhHHHHhcCCCEEEECCCh
Confidence 347999999999999999999999 9999999998765443433454432 2222 457899999999875
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00097 Score=59.52 Aligned_cols=68 Identities=16% Similarity=-0.023 Sum_probs=51.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhc----c--Ceeee-cCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN----M--GITPS-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~----~--~v~~d-~~d~~~~~~~D~Vi~~a~ 151 (267)
|||.|+|+|.+|..++..|... |+ +|..+++++++.+. +.. . ..... -.|.++++++|+||.+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~--~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~~a~~~aDiVViaag 78 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeCCHHHhCCCCEEEECCC
Confidence 6899999999999999999999 88 99999998765431 111 1 11122 134568899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 79 ~~~ 81 (294)
T 1oju_A 79 LAR 81 (294)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
|
| >2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0003 Score=66.73 Aligned_cols=66 Identities=17% Similarity=0.190 Sum_probs=50.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----CeeeecCCc-cc---cCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EA---TQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~d~~d~-~~---~~~~D~Vi~~a~~~ 153 (267)
++|.|+|+|.+|+.++..|.+. |++|++.+|++++.+.+... ++.. ..++ +. ++++|+||.|++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~gi~~-~~s~~e~v~~l~~aDvVilavp~~ 79 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESR--GYTVAIYNRTTSKTEEVFKEHQDKNLVF-TKTLEEFVGSLEKPRRIMLMVQAG 79 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSCEEE-CSSHHHHHHTBCSSCEEEECCCTT
T ss_pred CcEEEEeeHHHHHHHHHHHHhC--CCEEEEEcCCHHHHHHHHHhCcCCCeEE-eCCHHHHHhhccCCCEEEEEccCc
Confidence 6899999999999999999999 99999999998776665432 4432 2232 22 34599999998764
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00068 Score=60.77 Aligned_cols=69 Identities=10% Similarity=0.019 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhh----c------cCeeeec-CCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N------MGITPSL-KWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~----~------~~v~~d~-~d~~~~~~~D~Vi~~a~ 151 (267)
+|||.|+|+|.+|..++..|... |+ +|+.+++++++.+... . ....... .|.+++.++|+||.+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~--g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKD--NLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDYADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCHHHhCCCCEEEEeCC
Confidence 37999999999999999999999 98 9999999887654321 0 0111111 34467889999999997
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
...
T Consensus 82 ~p~ 84 (317)
T 2ewd_A 82 IPG 84 (317)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
|
| >3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0011 Score=62.84 Aligned_cols=68 Identities=10% Similarity=0.081 Sum_probs=50.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--------hhhccCee-----------e-ecCCccccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--------ELINMGIT-----------P-SLKWTEATQK 142 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--------~l~~~~v~-----------~-d~~d~~~~~~ 142 (267)
.+++|.|+|+|.+|..++..|++. |++|+++++++++.. .+.+.+.. . ...|.+.+.+
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~al~~ 130 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLA--GIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFHKLSN 130 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGGGCTT
T ss_pred cCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHHHHcc
Confidence 358999999999999999999999 999999999876321 11122211 0 1133456889
Q ss_pred CCEEEEccCC
Q 024494 143 FPYVIFCAPP 152 (267)
Q Consensus 143 ~D~Vi~~a~~ 152 (267)
+|+||-+++.
T Consensus 131 aDlVIeAVpe 140 (460)
T 3k6j_A 131 CDLIVESVIE 140 (460)
T ss_dssp CSEEEECCCS
T ss_pred CCEEEEcCCC
Confidence 9999999865
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0025 Score=57.56 Aligned_cols=69 Identities=17% Similarity=0.096 Sum_probs=51.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhh----cc------Ceeeec-CCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----NM------GITPSL-KWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~----~~------~v~~d~-~d~~~~~~~D~Vi~~a 150 (267)
+++||.|+|+|.+|..++..|... |+ +|+.+++++++.+... .. ..+... .|.+++.++|+||.++
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~--g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~~al~~aD~VI~av 90 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQK--DLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNYEYLQNSDVVIITA 90 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCHHHHCCCCEEEEcC
Confidence 447999999999999999999999 98 9999999887654311 10 111111 3456789999999999
Q ss_pred CCC
Q 024494 151 PPS 153 (267)
Q Consensus 151 ~~~ 153 (267)
+..
T Consensus 91 g~p 93 (328)
T 2hjr_A 91 GVP 93 (328)
T ss_dssp SCC
T ss_pred CCC
Confidence 754
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00024 Score=64.84 Aligned_cols=70 Identities=14% Similarity=0.114 Sum_probs=52.9
Q ss_pred CCCCeEEEEcccHHhHHHHHHHH-hcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~-~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|. .. |++|++.+|+++..+.....++... .+. +.+.++|+|+.+++...
T Consensus 161 l~g~~vgIIG~G~IG~~vA~~l~~~~--G~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvVil~vp~~~ 232 (348)
T 2w2k_A 161 PRGHVLGAVGLGAIQKEIARKAVHGL--GMKLVYYDVAPADAETEKALGAERV-DSLEELARRSDCVSVSVPYMK 232 (348)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTT--CCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHHHHCSEEEECCCCSG
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHhc--CCEEEEECCCCcchhhHhhcCcEEe-CCHHHHhccCCEEEEeCCCCh
Confidence 33489999999999999999999 88 9999999998766543333344432 233 35678999999988753
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00032 Score=63.62 Aligned_cols=67 Identities=18% Similarity=0.185 Sum_probs=51.8
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|+++. ......++... +. +.+.++|+|+.+++..
T Consensus 144 l~g~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~e~l~~aDiVil~vp~~ 211 (333)
T 2d0i_A 144 LYGKKVGILGMGAIGKAIARRLIPF--GVKLYYWSRHRKV-NVEKELKARYM--DIDELLEKSDIVILALPLT 211 (333)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCH-HHHHHHTEEEC--CHHHHHHHCSEEEECCCCC
T ss_pred CCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcch-hhhhhcCceec--CHHHHHhhCCEEEEcCCCC
Confidence 3448999999999999999999999 9999999998765 22223344432 33 3567899999999876
|
| >3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00032 Score=62.61 Aligned_cols=65 Identities=18% Similarity=0.205 Sum_probs=50.0
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|+++.... +. ...+. +.+.++|+|+.+.+...
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~-----~~-~~~~l~ell~~aDiV~l~~P~t~ 185 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAF--GMRVIAYTRSSVDQNV-----DV-ISESPADLFRQSDFVLIAIPLTD 185 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSCCCTTC-----SE-ECSSHHHHHHHCSEEEECCCCCT
T ss_pred eecchheeeccCchhHHHHHHHHhh--CcEEEEEecccccccc-----cc-ccCChHHHhhccCeEEEEeeccc
Confidence 3348999999999999999999999 9999999998765422 11 12232 45678999999988643
|
| >1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00036 Score=66.36 Aligned_cols=66 Identities=17% Similarity=0.216 Sum_probs=50.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-C-------eeeecCCc-cc---cCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G-------ITPSLKWT-EA---TQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~-------v~~d~~d~-~~---~~~~D~Vi~~a~~ 152 (267)
|+|.|+|+|.+|+.++..|.+. |++|++++|++++.+.+... + +.. ..+. +. ++++|+||.|++.
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~--G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~-~~~~~e~v~~l~~aDvVilaVp~ 78 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALILVQA 78 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECCCC
T ss_pred CEEEEEChHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE-ECCHHHHHhcccCCCEEEEecCC
Confidence 5899999999999999999999 99999999998776655432 3 221 2232 22 3469999999876
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 79 ~ 79 (478)
T 1pgj_A 79 G 79 (478)
T ss_dssp S
T ss_pred h
Confidence 4
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00042 Score=63.71 Aligned_cols=70 Identities=17% Similarity=0.134 Sum_probs=53.5
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|... |++ |++.+|++...+.....++... .+. +.+.++|+|+.+++...
T Consensus 162 l~g~tvgIIG~G~IG~~vA~~l~~~--G~~~V~~~d~~~~~~~~~~~~g~~~~-~~l~ell~~aDvV~l~~P~t~ 233 (364)
T 2j6i_A 162 IEGKTIATIGAGRIGYRVLERLVPF--NPKELLYYDYQALPKDAEEKVGARRV-ENIEELVAQADIVTVNAPLHA 233 (364)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGG--CCSEEEEECSSCCCHHHHHHTTEEEC-SSHHHHHHTCSEEEECCCCST
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhC--CCcEEEEECCCccchhHHHhcCcEec-CCHHHHHhcCCEEEECCCCCh
Confidence 3448999999999999999999999 997 9999998765543344455432 222 45678999999988753
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00024 Score=62.94 Aligned_cols=67 Identities=16% Similarity=0.214 Sum_probs=50.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeee-ecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITP-SLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~-d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.++++|+|+|-+|++++..|.+. |. +|++.+|++++...+.. .+.. ...+. +.+.++|+||++.+..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~--G~~~v~v~~R~~~~a~~la~-~~~~~~~~~~~~~~~~aDiVInaTp~G 186 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKI--VRPTLTVANRTMSRFNNWSL-NINKINLSHAESHLDEFDIIINTTPAG 186 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTT--CCSCCEEECSCGGGGTTCCS-CCEEECHHHHHHTGGGCSEEEECCC--
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHH-hcccccHhhHHHHhcCCCEEEECccCC
Confidence 37899999999999999999999 98 89999999887766543 2222 12222 3467899999998754
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00026 Score=62.67 Aligned_cols=68 Identities=16% Similarity=0.193 Sum_probs=51.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-C--------eeeecCC-ccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-G--------ITPSLKW-TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~--------v~~d~~d-~~~~~~~D~Vi~~a~~~ 153 (267)
.++++|+|+|-+|++++..|.+. | +|++.+|+.++...+... + +..+..+ .+.+.++|+||++++..
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~--G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn~ag~~ 204 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIG 204 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCTT
T ss_pred CCEEEEECchHHHHHHHHHHHHC--C-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEECCCCC
Confidence 37899999999999999999999 9 999999987665444211 0 1233333 34567899999999865
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 205 ~ 205 (287)
T 1nvt_A 205 M 205 (287)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0016 Score=58.53 Aligned_cols=69 Identities=13% Similarity=0.202 Sum_probs=50.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhc------cCeeeecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~------~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
++||.|+|+|.+|..++..|..+ + .+|..++.++++.+. +.. ..+.....+.+++.++|+||.+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~--~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~~~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQ--SIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKAGEYSDCHDADLVVICAG 83 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--CSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEECCGGGGTTCSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEeCCHHHhCCCCEEEECCC
Confidence 37999999999999999999988 7 489999987654322 111 111222234467899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
...
T Consensus 84 ~~~ 86 (317)
T 3d0o_A 84 AAQ 86 (317)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
|
| >3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00065 Score=61.47 Aligned_cols=68 Identities=22% Similarity=0.345 Sum_probs=50.8
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|++...+.+.. .....+. +.+.++|+|+.+.+...
T Consensus 135 l~gktvGIiGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~---~~~~~~l~ell~~aDvV~l~lPlt~ 203 (324)
T 3evt_A 135 LTGQQLLIYGTGQIGQSLAAKASAL--GMHVIGVNTTGHPADHFHE---TVAFTATADALATANFIVNALPLTP 203 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSCCCCTTCSE---EEEGGGCHHHHHHCSEEEECCCCCG
T ss_pred ccCCeEEEECcCHHHHHHHHHHHhC--CCEEEEECCCcchhHhHhh---ccccCCHHHHHhhCCEEEEcCCCch
Confidence 3448999999999999999999999 9999999998765433221 1112222 45678999999887543
|
| >3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00019 Score=66.30 Aligned_cols=69 Identities=17% Similarity=0.105 Sum_probs=48.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHh-cCCCCeEEEEe---CCCCCchh-hhccCe------------e----e--ecCCc-c
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQ-EHPGCQIYGQT---MTADHHDE-LINMGI------------T----P--SLKWT-E 138 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~-~~pG~~V~~l~---R~~~~~~~-l~~~~v------------~----~--d~~d~-~ 138 (267)
|||||.|+|+|.+|..++..|.+ . |++|++++ |++++... +...+. . . ...|+ +
T Consensus 1 ~~mkI~ViGaG~~G~~~a~~La~~~--G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (404)
T 3c7a_A 1 MTVKVCVCGGGNGAHTLSGLAASRD--GVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEI 78 (404)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTST--TEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhCC--CCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHH
Confidence 46899999999999999999977 6 99999999 65544443 222221 1 0 11233 3
Q ss_pred ccCCCCEEEEccCCC
Q 024494 139 ATQKFPYVIFCAPPS 153 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~ 153 (267)
.+.++|+||.+++..
T Consensus 79 a~~~aD~Vilav~~~ 93 (404)
T 3c7a_A 79 AISGADVVILTVPAF 93 (404)
T ss_dssp HHTTCSEEEECSCGG
T ss_pred HhCCCCEEEEeCchH
Confidence 467899999998754
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00034 Score=61.44 Aligned_cols=69 Identities=19% Similarity=0.114 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-Ce--eeecCCcccc--CCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GI--TPSLKWTEAT--QKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v--~~d~~d~~~~--~~~D~Vi~~a~~~~ 154 (267)
.++++|+|+|-+|++++..|.+. |++|++.+|++++...+.+. +. ..+..+.+.+ .++|+||++++...
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~--G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~~ 192 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 192 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCEEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCCC
Confidence 47899999999999999999999 99999999998776555321 11 1112222233 38999999998654
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00082 Score=58.03 Aligned_cols=67 Identities=21% Similarity=0.314 Sum_probs=47.2
Q ss_pred CeEEEE-c----------------ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee-ecCCc--------c
Q 024494 85 NDLLIV-G----------------PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWT--------E 138 (267)
Q Consensus 85 ~~ILV~-G----------------aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~-d~~d~--------~ 138 (267)
++|||| | +|.+|.+++++|.++ |++|+.++|.....+. ...++.. +.... +
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~--Ga~V~lv~~~~~~~~~-~~~~~~~~~v~s~~em~~~v~~ 80 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSA--GYEVCLITTKRALKPE-PHPNLSIREITNTKDLLIEMQE 80 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHT--TCEEEEEECTTSCCCC-CCTTEEEEECCSHHHHHHHHHH
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHC--CCEEEEEeCCcccccc-CCCCeEEEEHhHHHHHHHHHHH
Confidence 789999 4 589999999999999 9999999997542211 0123332 12211 2
Q ss_pred ccCCCCEEEEccCCCC
Q 024494 139 ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~ 154 (267)
.+.++|++|++|+..+
T Consensus 81 ~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 81 RVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HGGGCSEEEECSBCCS
T ss_pred hcCCCCEEEEcCcccc
Confidence 4568999999999654
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0023 Score=64.51 Aligned_cols=134 Identities=14% Similarity=0.055 Sum_probs=82.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHH-hcCCCCe-EEEEeCCCC---Cchh----hhccCe-----eeecCCcc-------cc--
Q 024494 85 NDLLIVGP-GVLGRLVAEQWR-QEHPGCQ-IYGQTMTAD---HHDE----LINMGI-----TPSLKWTE-------AT-- 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~-~~~pG~~-V~~l~R~~~---~~~~----l~~~~v-----~~d~~d~~-------~~-- 140 (267)
+.+||||+ |-||+.+++.|. ++ |.+ |+.++|+.. ...+ +...+. .+|+.|.+ ..
T Consensus 531 ~~~lItGg~~GlG~aiA~~la~~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~ 608 (795)
T 3slk_A 531 GTVLVTGGTGALGAEVARHLVIER--GVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD 608 (795)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTS--SCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred cceeeccCCCCcHHHHHHHHHHHc--CCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 67999985 999999999998 78 984 899999833 2222 222342 34555531 11
Q ss_pred -CCCCEEEEccCCCCCCC----hHHHH-----------HHHHHHhCCCCcEEEEcCCccc-cCCCCCccCCCCCCCCCCC
Q 024494 141 -QKFPYVIFCAPPSRSLD----YPGDV-----------RLAALSWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 141 -~~~D~Vi~~a~~~~~~~----~~~~~-----------~~l~~~~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~~~ 203 (267)
...|.|||+|+...... -.+.. .++.......-+||++||..-+ |... .
T Consensus 609 ~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~ag~~g~~g--------------~ 674 (795)
T 3slk_A 609 EHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGSGG--------------Q 674 (795)
T ss_dssp TSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETHHHHTCSS--------------C
T ss_pred hCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHHhcCCCCC--------------C
Confidence 26899999999754321 11222 2222222111289999997654 4221 2
Q ss_pred CHHHHHHHHHHHHHHHc---C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp~ 234 (267)
..|+.+|...+.+.++. + +..+-|+.+-.++
T Consensus 675 ~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g 710 (795)
T 3slk_A 675 GNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHG 710 (795)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcch
Confidence 46888887666554443 4 7888898877665
|
| >4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00087 Score=61.07 Aligned_cols=95 Identities=13% Similarity=0.101 Sum_probs=55.8
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCCCChHH
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLDYPG 160 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~~~~~~ 160 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|++.... +... ..+. +.+.++|+|+.+++........-
T Consensus 169 l~gktiGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~-----~~~~-~~sl~ell~~aDvVil~vP~t~~t~~li 240 (340)
T 4dgs_A 169 PKGKRIGVLGLGQIGRALASRAEAF--GMSVRYWNRSTLSGV-----DWIA-HQSPVDLARDSDVLAVCVAASAATQNIV 240 (340)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCTTS-----CCEE-CSSHHHHHHTCSEEEECC----------
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCccccc-----Ccee-cCCHHHHHhcCCEEEEeCCCCHHHHHHh
Confidence 3348999999999999999999998 999999999875421 2211 2222 46788999999987543221110
Q ss_pred HHHHHHHHhCCCCcEEEEcCCcccc
Q 024494 161 DVRLAALSWNGEGSFLFTSSSAIYD 185 (267)
Q Consensus 161 ~~~~l~~~~~~v~r~V~~SS~~VYg 185 (267)
. ...+.......-||-+|...+..
T Consensus 241 ~-~~~l~~mk~gailIN~aRG~vvd 264 (340)
T 4dgs_A 241 D-ASLLQALGPEGIVVNVARGNVVD 264 (340)
T ss_dssp C-HHHHHHTTTTCEEEECSCC----
T ss_pred h-HHHHhcCCCCCEEEECCCCcccC
Confidence 0 11111222335677777666543
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00058 Score=63.44 Aligned_cols=68 Identities=10% Similarity=-0.015 Sum_probs=51.6
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
..++|.|+|.|.||+.+++.|... |++|++.+|++.........++... .+. +.+.++|+|+.+++..
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~--G~~V~~~d~~~~~~~~~~~~G~~~~-~~l~ell~~aDvV~l~~Plt 258 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKELNLTWH-ATREDMYPVCDVVTLNCPLH 258 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHHHTCEEC-SSHHHHGGGCSEEEECSCCC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC--CCEEEEEcCCccchhhHhhcCceec-CCHHHHHhcCCEEEEecCCc
Confidence 348999999999999999999999 9999999998755433333454431 122 4677899999988854
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00031 Score=63.70 Aligned_cols=68 Identities=13% Similarity=0.209 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|.|+|.|.||+.+++.|... |++|++.+|++.........++... +. +.+.++|+|+.+++...
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~~~~~~g~~~~--~l~ell~~aDvV~l~~P~t~ 212 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGW--GATLQYHEAKALDTQTEQRLGLRQV--ACSELFASSDFILLALPLNA 212 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTS--CCEEEEECSSCCCHHHHHHHTEEEC--CHHHHHHHCSEEEECCCCST
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCCCcHhHHHhcCceeC--CHHHHHhhCCEEEEcCCCCH
Confidence 348999999999999999999998 9999999998754433333455432 22 45678999999888543
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00056 Score=61.12 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=47.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhh----hcc-----CeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l----~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|..++..|... |+ +|+.+++++++.... ... .......+.+++.++|+||.+++..
T Consensus 1 mkI~VIGaG~vG~~la~~la~~--g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~a~~~aDvVIi~~~~~ 78 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLR--GSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWHGGHSELADAQVVILTAGAN 78 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEEECGGGGTTCSEEEECC---
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEECCHHHhCCCCEEEEcCCCC
Confidence 5899999999999999999999 98 999999986543221 110 1111113446789999999999754
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0012 Score=71.50 Aligned_cols=130 Identities=13% Similarity=0.030 Sum_probs=79.6
Q ss_pred CeEEEEcc-cH-HhHHHHHHHHhcCCCCeEEEEe-CCCCCch----hh----hccC-----eeeecCCcc----------
Q 024494 85 NDLLIVGP-GV-LGRLVAEQWRQEHPGCQIYGQT-MTADHHD----EL----INMG-----ITPSLKWTE---------- 138 (267)
Q Consensus 85 ~~ILV~Ga-G~-IG~~La~~L~~~~pG~~V~~l~-R~~~~~~----~l----~~~~-----v~~d~~d~~---------- 138 (267)
+.+||||+ |- ||.+++++|+++ |++|++++ |+.+... ++ ...+ +.+|+.|.+
T Consensus 653 KvaLVTGASgGgIG~aIAr~LA~~--GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~ 730 (1878)
T 2uv9_A 653 KHALMTGAGAGSIGAEVLQGLLSG--GAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY 730 (1878)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 67999996 77 999999999999 99999986 5444321 11 1112 234555531
Q ss_pred -c---cC-CCCEEEEccCCCCCC----Ch---HHHHH-----------HHHHH---hC-----CCCcEEEEcCCccccCC
Q 024494 139 -A---TQ-KFPYVIFCAPPSRSL----DY---PGDVR-----------LAALS---WN-----GEGSFLFTSSSAIYDCS 187 (267)
Q Consensus 139 -~---~~-~~D~Vi~~a~~~~~~----~~---~~~~~-----------~l~~~---~~-----~v~r~V~~SS~~VYg~~ 187 (267)
. .. ..|+|||+||..... +. .+... .+... .. +..+||++||...+-.
T Consensus 731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g- 809 (1878)
T 2uv9_A 731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG- 809 (1878)
T ss_dssp CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS-
T ss_pred HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC-
Confidence 1 33 689999999964321 11 11111 11111 11 2358999999754321
Q ss_pred CCCccCCCCCCCCCCCCHHHHHHHHHHHHHHH-----cC----eeEEeeCccc
Q 024494 188 DNGACDEDSPVVPIGRSPRTDVLLKAEKVILE-----FG----GCVLRLAGLY 231 (267)
Q Consensus 188 ~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~-----~~----~~IlR~~~iy 231 (267)
. ...|+.+|...+.+... ++ +..+.|+.+-
T Consensus 810 -----------g---~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 810 -----------N---DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp -----------C---CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred -----------C---chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 0 13599999988876432 22 6778899887
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00028 Score=62.97 Aligned_cols=69 Identities=14% Similarity=0.126 Sum_probs=51.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc-cCe---ee-ecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGI---TP-SLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~-~~v---~~-d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.++++|+|+|-+|+.++..|.+. |. +|++.+|++++.+.+.+ .+. .. +..+. +.+.++|+||++.+...
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~--G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLST--AAERIDMANRTVEKAERLVREGDERRSAYFSLAEAETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT--TCSEEEEECSSHHHHHHHHHHSCSSSCCEECHHHHHHTGGGCSEEEECSCTTC
T ss_pred CCEEEEECcHHHHHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHhhhccCceeeHHHHHhhhccCCEEEECCCCCC
Confidence 47899999999999999999999 98 99999999877665542 111 11 11122 35678999999998654
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00095 Score=60.88 Aligned_cols=69 Identities=20% Similarity=0.196 Sum_probs=47.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhccCe---eee-cCCc-cccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LINMGI---TPS-LKWT-EATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~~~v---~~d-~~d~-~~~~~~D~Vi~~a~ 151 (267)
++||.|+|+ |++|+.++..|+.. | .+|+.+|.++++... +..... ... ..|. ++++++|+||+++|
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~--g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~t~d~~~al~dADvVvitaG 85 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMM--RLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTFTSDIKEALTDAKYIVSSGG 85 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHT--TCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEEESCHHHHHTTEEEEEECCC
T ss_pred CCEEEEECCCChHHHHHHHHHHhc--CCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEEcCCHHHHhCCCCEEEEccC
Confidence 479999997 99999999999988 7 599999997654432 221111 111 1233 46899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 86 ~p~ 88 (343)
T 3fi9_A 86 APR 88 (343)
T ss_dssp ---
T ss_pred CCC
Confidence 654
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00028 Score=66.83 Aligned_cols=64 Identities=19% Similarity=0.236 Sum_probs=50.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeec---CCcc-----ccCCCCEEEEcc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSL---KWTE-----ATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~---~d~~-----~~~~~D~Vi~~a 150 (267)
|||+|+|+|-+|+.|++.|.++ ||+|++++++++....+.. .++.... .+++ -..++|.++-+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGE--NNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCST--TEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 8999999999999999999999 9999999999888766543 4554433 3432 357899887543
|
| >4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00056 Score=62.47 Aligned_cols=66 Identities=23% Similarity=0.128 Sum_probs=50.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.-++|.|+|.|.||+.+++.|... |.+|++.+|++....... ++.. ..+. +.+.++|+|+.+.+..
T Consensus 172 ~gktvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~--g~~~-~~~l~ell~~sDvV~l~~Plt 238 (345)
T 4g2n_A 172 TGRRLGIFGMGRIGRAIATRARGF--GLAIHYHNRTRLSHALEE--GAIY-HDTLDSLLGASDIFLIAAPGR 238 (345)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHT--TCEE-CSSHHHHHHTCSEEEECSCCC
T ss_pred CCCEEEEEEeChhHHHHHHHHHHC--CCEEEEECCCCcchhhhc--CCeE-eCCHHHHHhhCCEEEEecCCC
Confidence 348999999999999999999998 999999999875432221 4332 1232 4678899999988754
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0011 Score=57.67 Aligned_cols=60 Identities=18% Similarity=0.251 Sum_probs=39.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEE-EeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYG-QTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~-l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
||||.|+|+|.+|+.+++.+.++ ++++.+ ++|++.. ..++.. ..|. +.+ ++|+||.++.|
T Consensus 3 MmkI~ViGaGrMG~~i~~~l~~~--~~eLva~~d~~~~~-----~~gv~v-~~dl~~l~-~~DVvIDft~p 64 (243)
T 3qy9_A 3 SMKILLIGYGAMNQRVARLAEEK--GHEIVGVIENTPKA-----TTPYQQ-YQHIADVK-GADVAIDFSNP 64 (243)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEEECSSCC-------CCSCB-CSCTTTCT-TCSEEEECSCH
T ss_pred ceEEEEECcCHHHHHHHHHHHhC--CCEEEEEEecCccc-----cCCCce-eCCHHHHh-CCCEEEEeCCh
Confidence 68999999999999999999988 558776 5665542 122221 1222 223 77887766654
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00037 Score=63.95 Aligned_cols=69 Identities=16% Similarity=0.107 Sum_probs=50.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCee--eecCCc----cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGIT--PSLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~--~d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
..++|+|+|+|.+|+.+++.|... |++|++++|++++.+.+.. .+.. .+..+. +.+.++|+||++++..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~--Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM--GAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 348999999999999999999999 9999999998776544432 2322 232222 3456899999999854
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00074 Score=60.69 Aligned_cols=68 Identities=13% Similarity=0.113 Sum_probs=52.4
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|++++. .....++... +. +.+.++|+|+.+.+...
T Consensus 140 l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~-~~~~~g~~~~--~l~ell~~aDvVvl~~P~~~ 208 (313)
T 2ekl_A 140 LAGKTIGIVGFGRIGTKVGIIANAM--GMKVLAYDILDIRE-KAEKINAKAV--SLEELLKNSDVISLHVTVSK 208 (313)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSCCHH-HHHHTTCEEC--CHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEECCCcchh-HHHhcCceec--CHHHHHhhCCEEEEeccCCh
Confidence 3448999999999999999999999 99999999987653 2233455432 33 45678999999988654
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00075 Score=61.34 Aligned_cols=67 Identities=19% Similarity=0.203 Sum_probs=51.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|.|+|.|.||+.+++.|... |++|++.+|++... .....++.. .+. +.+.++|+|+.+++...
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~-~~~~~g~~~--~~l~ell~~aDvV~l~~P~t~ 231 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSF--GMKTIGYDPIISPE-VSASFGVQQ--LPLEEIWPLCDFITVHTPLLP 231 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSCHH-HHHHTTCEE--CCHHHHGGGCSEEEECCCCCT
T ss_pred CcCEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchh-hhhhcCcee--CCHHHHHhcCCEEEEecCCCH
Confidence 348999999999999999999998 99999999986542 223345543 233 46788999999988654
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0033 Score=56.98 Aligned_cols=70 Identities=19% Similarity=0.114 Sum_probs=51.4
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc----Ce-eee-cCCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM----GI-TPS-LKWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~----~v-~~d-~~d~~~~~~~D~Vi~~a 150 (267)
.++||.|+|+|.+|..++..|+.+ |. +|+.+++++++.+. +... .. ... ..|.+.+.++|+||.++
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~d~~~~~~aDiVvi~a 95 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMK--DLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSKDYSVTANSKLVIITA 95 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECSSGGGGTTEEEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcCCHHHhCCCCEEEEcc
Confidence 458999999999999999999998 76 89999997654432 2211 00 111 24556789999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+..+
T Consensus 96 G~~~ 99 (331)
T 4aj2_A 96 GARQ 99 (331)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 9654
|
| >3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00078 Score=61.16 Aligned_cols=64 Identities=19% Similarity=0.204 Sum_probs=49.7
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
...++|.|+|+|.||+.+++.|... |++|++.+|+++... ++.. ..+. +.+.++|+|+.+++..
T Consensus 162 l~g~~vgIIG~G~iG~~vA~~l~~~--G~~V~~~dr~~~~~~-----g~~~-~~~l~ell~~aDvVil~vP~~ 226 (333)
T 3ba1_A 162 FSGKRVGIIGLGRIGLAVAERAEAF--DCPISYFSRSKKPNT-----NYTY-YGSVVELASNSDILVVACPLT 226 (333)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTT--TCCEEEECSSCCTTC-----CSEE-ESCHHHHHHTCSEEEECSCCC
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCchhcc-----Ccee-cCCHHHHHhcCCEEEEecCCC
Confidence 3447899999999999999999998 999999999876532 2221 2232 4567899999998875
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0033 Score=56.40 Aligned_cols=70 Identities=13% Similarity=0.137 Sum_probs=50.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhh----hcc------CeeeecCCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM------GITPSLKWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l----~~~------~v~~d~~d~~~~~~~D~Vi~~a 150 (267)
+++||.|+|+|.+|..++..|+.. +. +|+.+++++++.... ... .+.....+.+++.++|+||.++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~--~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~~~~al~~aDvViia~ 82 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICA 82 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcCcHHHhCCCCEEEEcC
Confidence 357999999999999999999888 64 899999986543221 110 1111122346789999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+...
T Consensus 83 ~~~~ 86 (316)
T 1ldn_A 83 GANQ 86 (316)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8654
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00049 Score=60.09 Aligned_cols=66 Identities=21% Similarity=0.124 Sum_probs=50.2
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
+++|+|+|-.|++++..|.+. |. +|++.+|++++.+.+.+..-.....+. +.+.++|+||++.+..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~--G~~~I~v~nR~~~ka~~la~~~~~~~~~~~~~~~~~aDiVInatp~g 177 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQM--GVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVG 177 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCCEEEEESCHHHHHTCCSSCEEEEGGGHHHHHHTCSEEEECSSTT
T ss_pred eEEEECcHHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHHHcccCCHHHHHhhhcCCCEEEECCCCC
Confidence 899999999999999999999 98 899999998877665432111122332 3467899999988753
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00035 Score=63.99 Aligned_cols=97 Identities=14% Similarity=0.060 Sum_probs=62.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCCCC-hHH
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLD-YPG 160 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~~~-~~~ 160 (267)
.-++|.|+|.|.||+.+++.|... |++|++.+|++.. ......++.. ..+. +.+.++|+|+.+.+...... ..+
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~-~~~~~~g~~~-~~~l~ell~~aDiV~l~~Plt~~t~~li~ 234 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAF--GMNVLVWGRENSK-ERARADGFAV-AESKDALFEQSDVLSVHLRLNDETRSIIT 234 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSHHHH-HHHHHTTCEE-CSSHHHHHHHCSEEEECCCCSTTTTTCBC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhC--CCEEEEECCCCCH-HHHHhcCceE-eCCHHHHHhhCCEEEEeccCcHHHHHhhC
Confidence 348999999999999999999999 9999999997532 2223345542 2232 46778999999987654221 110
Q ss_pred HHHHHHHHhCCCCcEEEEcCCcccc
Q 024494 161 DVRLAALSWNGEGSFLFTSSSAIYD 185 (267)
Q Consensus 161 ~~~~l~~~~~~v~r~V~~SS~~VYg 185 (267)
...+.......-||-+|...+..
T Consensus 235 --~~~l~~mk~gailIN~aRg~~vd 257 (352)
T 3gg9_A 235 --VADLTRMKPTALFVNTSRAELVE 257 (352)
T ss_dssp --HHHHTTSCTTCEEEECSCGGGBC
T ss_pred --HHHHhhCCCCcEEEECCCchhhc
Confidence 01111112345677777666543
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00053 Score=61.85 Aligned_cols=68 Identities=16% Similarity=0.087 Sum_probs=51.2
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|.|+|.|.||+.+++.|... |++|++.+| +++.. .....++.. ..+. +.+.++|+|+.+++...
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~-~~~~~g~~~-~~~l~ell~~aDvVil~~p~~~ 214 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSS-DEASYQATF-HDSLDSLLSVSQFFSLNAPSTP 214 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHH-HHHHHTCEE-CSSHHHHHHHCSEEEECCCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHC--CCEEEEECCCCcChh-hhhhcCcEE-cCCHHHHHhhCCEEEEeccCch
Confidence 347999999999999999999998 999999999 77653 222335443 2132 45678999999988643
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0034 Score=56.46 Aligned_cols=68 Identities=13% Similarity=0.103 Sum_probs=49.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCC--CCchhh----hc------cCeeee-cCCccccCCCCEEEEcc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA--DHHDEL----IN------MGITPS-LKWTEATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~--~~~~~l----~~------~~v~~d-~~d~~~~~~~D~Vi~~a 150 (267)
+||.|+|+|.+|..++..|... |+ +|+.+++++ ++.... .. ...... -.|.+.+.++|+||.++
T Consensus 9 ~kv~ViGaG~vG~~ia~~l~~~--g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 9 KKVSVIGAGFTGATTAFLLAQK--ELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSDYADTADSDVVVITA 86 (315)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCCHHHhCCCCEEEEeC
Confidence 6899999999999999999999 99 999999983 332211 10 011111 13456889999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+..+
T Consensus 87 g~p~ 90 (315)
T 3tl2_A 87 GIAR 90 (315)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8654
|
| >3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0014 Score=62.40 Aligned_cols=68 Identities=21% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----------cCeee------------ecCCcccc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----------MGITP------------SLKWTEAT 140 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----------~~v~~------------d~~d~~~~ 140 (267)
+++|.|+|+|.+|..++..|++. |++|++.+++++..+.... .+... ...+.+.+
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~a--G~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASH--GHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCEEEEECcCHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 36899999999999999999999 9999999999876544321 12100 01333567
Q ss_pred CCCCEEEEccCCC
Q 024494 141 QKFPYVIFCAPPS 153 (267)
Q Consensus 141 ~~~D~Vi~~a~~~ 153 (267)
.++|+||.+++..
T Consensus 83 ~~aDlVIeAVpe~ 95 (483)
T 3mog_A 83 AAADLVIEAASER 95 (483)
T ss_dssp GGCSEEEECCCCC
T ss_pred cCCCEEEEcCCCc
Confidence 8999999998653
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00073 Score=61.39 Aligned_cols=69 Identities=12% Similarity=0.131 Sum_probs=40.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcC-CCCeEEEEeC--CCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQTM--TADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~-pG~~V~~l~R--~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|+||.|+|+ |++|+.|++.|.++. |..+|+++.. +..+.-.+....+...-.+++...++|+||.|.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~~~~~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEGGGCCGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecCChHHhcCCCEEEECCCc
Confidence 689999995 999999999998762 4678888763 22221111111111111122234567888777653
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00039 Score=62.67 Aligned_cols=67 Identities=19% Similarity=0.136 Sum_probs=49.6
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|+++..+..... ....+. +.+.++|+|+.+.+..
T Consensus 137 l~g~tvGIiG~G~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~~~---~~~~~l~ell~~aDiV~l~~Plt 204 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKVAESLQAW--GFPLRCWSRSRKSWPGVESY---VGREELRAFLNQTRVLINLLPNT 204 (315)
T ss_dssp STTCCEEEECCSHHHHHHHHHHHTT--TCCEEEEESSCCCCTTCEEE---ESHHHHHHHHHTCSEEEECCCCC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHC--CCEEEEEcCCchhhhhhhhh---cccCCHHHHHhhCCEEEEecCCc
Confidence 3448999999999999999999999 99999999987654322110 001122 4567899999988755
|
| >2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00018 Score=63.09 Aligned_cols=66 Identities=21% Similarity=0.200 Sum_probs=41.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeE-EEEeCCCCCchhhhc-cCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQI-YGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V-~~l~R~~~~~~~l~~-~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
|||+|.|+|+|.+|+.+++.|.+. ++| .+.+|++++...+.. .+. ...+. +.+.++|+||.|.++.
T Consensus 1 M~m~I~iIG~G~mG~~la~~l~~~---~~v~~v~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~DvVilav~~~ 69 (276)
T 2i76_A 1 MSLVLNFVGTGTLTRFFLECLKDR---YEIGYILSRSIDRARNLAEVYGG--KAATLEKHPELNGVVFVIVPDR 69 (276)
T ss_dssp ---CCEEESCCHHHHHHHHTTC-------CCCEECSSHHHHHHHHHHTCC--CCCSSCCCCC---CEEECSCTT
T ss_pred CCceEEEEeCCHHHHHHHHHHHHc---CcEEEEEeCCHHHHHHHHHHcCC--ccCCHHHHHhcCCEEEEeCChH
Confidence 468999999999999999999765 788 488898776655532 344 22333 3467899999998775
|
| >3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00083 Score=60.82 Aligned_cols=68 Identities=18% Similarity=0.308 Sum_probs=50.1
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..-++|.|+|.|.||+.+++.|... |++|++.+|++....... .. ....+. +.+.++|+|+.+++...
T Consensus 138 l~g~tvGIIGlG~IG~~vA~~l~~~--G~~V~~~dr~~~~~~~~~--~~-~~~~~l~ell~~aDvV~l~lPlt~ 206 (324)
T 3hg7_A 138 LKGRTLLILGTGSIGQHIAHTGKHF--GMKVLGVSRSGRERAGFD--QV-YQLPALNKMLAQADVIVSVLPATR 206 (324)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCTTCS--EE-ECGGGHHHHHHTCSEEEECCCCCS
T ss_pred cccceEEEEEECHHHHHHHHHHHhC--CCEEEEEcCChHHhhhhh--cc-cccCCHHHHHhhCCEEEEeCCCCH
Confidence 3348999999999999999999999 999999999875433221 11 112222 46788999999887543
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00089 Score=61.16 Aligned_cols=35 Identities=11% Similarity=0.232 Sum_probs=29.1
Q ss_pred CCCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 83 ~m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
||+||.|+| +|++|+.+++.|.++ |+.+|+++.++
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~-p~~ev~~i~~s 42 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADH-PMFELTALAAS 42 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTC-SSEEEEEEEEC
T ss_pred ccceEEEECcCCHHHHHHHHHHhcC-CCCEEEEEEcc
Confidence 447999999 599999999999876 57899888653
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0024 Score=57.65 Aligned_cols=69 Identities=17% Similarity=0.149 Sum_probs=49.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc-----CeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
++||.|+|+|.+|..++-.|... +. +|..+|+++++.+. +... .+.....+.+++.++|+||.+++.
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~~~~a~~~aDvVii~ag~ 86 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQ--GIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSAEYSDAKDADLVVITAGA 86 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECCGGGGGGCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEEcCCC
Confidence 37999999999999999999888 65 89999997654432 1111 111222344678999999999986
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 87 ~~ 88 (326)
T 2zqz_A 87 PQ 88 (326)
T ss_dssp C-
T ss_pred CC
Confidence 54
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0028 Score=57.09 Aligned_cols=68 Identities=16% Similarity=0.151 Sum_probs=49.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc-----CeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.+|..++-.|... +. +|..+|+++++.+. +... .+.....+.+++.++|+||.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~--~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~~~~a~~~aDvVii~ag~~ 83 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGAP 83 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC-
T ss_pred CEEEEECCCHHHHHHHHHHHcC--CCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEECCHHHhCCCCEEEECCCCC
Confidence 7999999999999999999988 76 89999997655432 1111 1112223446799999999999865
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 84 ~ 84 (318)
T 1ez4_A 84 Q 84 (318)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0012 Score=60.11 Aligned_cols=92 Identities=13% Similarity=0.121 Sum_probs=60.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCCCC-hHHH
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLD-YPGD 161 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~~~-~~~~ 161 (267)
-++|.|+|.|.||+.+++.|... |.+|++.+|++... .. .++... +. +.+.++|+|+.+++...... ..+
T Consensus 148 gktvgIiGlG~IG~~vA~~l~~~--G~~V~~~d~~~~~~--~~-~~~~~~--~l~ell~~aDvV~l~~Plt~~t~~li~- 219 (343)
T 2yq5_A 148 NLTVGLIGVGHIGSAVAEIFSAM--GAKVIAYDVAYNPE--FE-PFLTYT--DFDTVLKEADIVSLHTPLFPSTENMIG- 219 (343)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCGG--GT-TTCEEC--CHHHHHHHCSEEEECCCCCTTTTTCBC-
T ss_pred CCeEEEEecCHHHHHHHHHHhhC--CCEEEEECCChhhh--hh-cccccc--CHHHHHhcCCEEEEcCCCCHHHHHHhh-
Confidence 37999999999999999999999 99999999987542 11 122221 33 45778999999988653321 111
Q ss_pred HHHHHHHhCCCCcEEEEcCCccc
Q 024494 162 VRLAALSWNGEGSFLFTSSSAIY 184 (267)
Q Consensus 162 ~~~l~~~~~~v~r~V~~SS~~VY 184 (267)
...+.......-||-+|..++-
T Consensus 220 -~~~l~~mk~gailIN~aRg~~v 241 (343)
T 2yq5_A 220 -EKQLKEMKKSAYLINCARGELV 241 (343)
T ss_dssp -HHHHHHSCTTCEEEECSCGGGB
T ss_pred -HHHHhhCCCCcEEEECCCChhh
Confidence 1111122234567777766654
|
| >1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0014 Score=58.61 Aligned_cols=92 Identities=13% Similarity=0.144 Sum_probs=60.2
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCCC-ChH
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSL-DYP 159 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~~-~~~ 159 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|+++ . . +.. ...+. +.+.++|+|+.+++..... ...
T Consensus 122 l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~dr~~~-~-~----~~~-~~~~l~ell~~aDvV~l~~P~~~~t~~~i 192 (303)
T 1qp8_A 122 IQGEKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPK-E-G----PWR-FTNSLEEALREARAAVCALPLNKHTRGLV 192 (303)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCC-C-S----SSC-CBSCSHHHHTTCSEEEECCCCSTTTTTCB
T ss_pred CCCCEEEEEccCHHHHHHHHHHHHC--CCEEEEECCCcc-c-c----Ccc-cCCCHHHHHhhCCEEEEeCcCchHHHHHh
Confidence 3448999999999999999999999 999999999876 2 1 211 11222 4678999999998865422 111
Q ss_pred HHHHHHHHHhCCCCcEEEEcCCccc
Q 024494 160 GDVRLAALSWNGEGSFLFTSSSAIY 184 (267)
Q Consensus 160 ~~~~~l~~~~~~v~r~V~~SS~~VY 184 (267)
+ ...+.......-+|-+|+..+.
T Consensus 193 ~--~~~l~~mk~gailin~srg~~v 215 (303)
T 1qp8_A 193 K--YQHLALMAEDAVFVNVGRAEVL 215 (303)
T ss_dssp C--HHHHTTSCTTCEEEECSCGGGB
T ss_pred C--HHHHhhCCCCCEEEECCCCccc
Confidence 1 1111111223457777776554
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0016 Score=51.57 Aligned_cols=84 Identities=15% Similarity=0.239 Sum_probs=53.8
Q ss_pred CCCeEEEEcc----cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCCCC
Q 024494 83 GENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 83 ~m~~ILV~Ga----G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~~~ 157 (267)
..++|.|+|+ |.+|..+++.|++. |++|+.++++.+.. .|+.+. .+. +....+|+++.+.++..
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~--G~~V~~vnp~~~~i-----~G~~~~-~s~~el~~~vDlvii~vp~~~--- 81 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----EGLKCY-RSVRELPKDVDVIVFVVPPKV--- 81 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECB-SSGGGSCTTCCEEEECSCHHH---
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHC--CCEEEEeCCCCCeE-----CCeeec-CCHHHhCCCCCEEEEEeCHHH---
Confidence 3478999998 99999999999999 99988877664322 244432 222 33457999999987421
Q ss_pred hHHHHHHHHHHhCCCCcEEEEc
Q 024494 158 YPGDVRLAALSWNGEGSFLFTS 179 (267)
Q Consensus 158 ~~~~~~~l~~~~~~v~r~V~~S 179 (267)
..+.++.+ . ..+++.++..+
T Consensus 82 v~~v~~~~-~-~~g~~~i~~~~ 101 (138)
T 1y81_A 82 GLQVAKEA-V-EAGFKKLWFQP 101 (138)
T ss_dssp HHHHHHHH-H-HTTCCEEEECT
T ss_pred HHHHHHHH-H-HcCCCEEEEcC
Confidence 11222222 2 24777766554
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0013 Score=59.70 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=45.9
Q ss_pred CeEEEEc-ccHHhHHHHHHHHhcCCCC--e-----EEEEeCCCC--Cch----hhhccC---ee-eec--CCccccCCCC
Q 024494 85 NDLLIVG-PGVLGRLVAEQWRQEHPGC--Q-----IYGQTMTAD--HHD----ELINMG---IT-PSL--KWTEATQKFP 144 (267)
Q Consensus 85 ~~ILV~G-aG~IG~~La~~L~~~~pG~--~-----V~~l~R~~~--~~~----~l~~~~---v~-~d~--~d~~~~~~~D 144 (267)
+||+|+| +|+||++++..|... +. + +..+|+.+. +.. ++.... .. ... .+.+.+.++|
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~--~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daD 81 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred eEEEEECCCCHHHHHHHHHHHhC--CCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCC
Confidence 7899999 599999999999887 65 5 889988642 111 122111 10 111 2235789999
Q ss_pred EEEEccCCCC
Q 024494 145 YVIFCAPPSR 154 (267)
Q Consensus 145 ~Vi~~a~~~~ 154 (267)
+||++|+..+
T Consensus 82 vVvitAg~pr 91 (333)
T 5mdh_A 82 VAILVGSMPR 91 (333)
T ss_dssp EEEECCSCCC
T ss_pred EEEEeCCCCC
Confidence 9999998553
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0053 Score=55.63 Aligned_cols=70 Identities=14% Similarity=0.016 Sum_probs=51.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc-----Ceeee-cCCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPS-LKWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~-----~v~~d-~~d~~~~~~~D~Vi~~a 150 (267)
.++||.|+|+|.+|..++..|+.. |. +|+.+++++++... +... ..... ..|.+.+.++|+||.++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~--g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~~~daDiVIita 97 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMK--DLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSVSAGSKLVVITA 97 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHH--CCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCSCSSCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC--CCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHHhCCCCEEEEeC
Confidence 358999999999999999999999 86 99999997654432 1110 00111 13455689999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
|..+
T Consensus 98 G~p~ 101 (330)
T 3ldh_A 98 GARQ 101 (330)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 8654
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0011 Score=60.95 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=50.7
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.-++|.|+|.|.||+.+++.|..- |++|++.+|.... ......++... +. +.+.++|+|+.+++...
T Consensus 175 ~gktvGIIGlG~IG~~vA~~l~~f--G~~V~~~d~~~~~-~~~~~~g~~~~--~l~ell~~aDvV~l~~Plt~ 242 (365)
T 4hy3_A 175 AGSEIGIVGFGDLGKALRRVLSGF--RARIRVFDPWLPR-SMLEENGVEPA--SLEDVLTKSDFIFVVAAVTS 242 (365)
T ss_dssp SSSEEEEECCSHHHHHHHHHHTTS--CCEEEEECSSSCH-HHHHHTTCEEC--CHHHHHHSCSEEEECSCSSC
T ss_pred CCCEEEEecCCcccHHHHHhhhhC--CCEEEEECCCCCH-HHHhhcCeeeC--CHHHHHhcCCEEEEcCcCCH
Confidence 348999999999999999999998 9999999997532 22233455432 22 46788999999887653
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0018 Score=58.38 Aligned_cols=67 Identities=13% Similarity=0.251 Sum_probs=53.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccc-cCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEA-TQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~-~~~~D~Vi~~a~~~ 153 (267)
.+|||.|+|-+|...++.++.. |.+|+++++++++.+.+++.|.+..+.+.+. ..++|+||.+++..
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~D~vid~~g~~ 245 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIPTH 245 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHHTTCSEEESSGGGCCSCEEEEEECCCSC
T ss_pred CEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHhcCCCeecCCHHHHhcCCCEEEECCCcH
Confidence 7899999999999999999888 9999999999988876666676544344332 23899999998854
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0014 Score=59.61 Aligned_cols=68 Identities=19% Similarity=0.167 Sum_probs=43.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC---CCchh-------hhcc-CeeeecC-Ccccc-CCCCEEEEc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA---DHHDE-------LINM-GITPSLK-WTEAT-QKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~---~~~~~-------l~~~-~v~~d~~-d~~~~-~~~D~Vi~~ 149 (267)
|+||.|+|+ |++|+.|++.|.+. |++++..+..+. ..... +... +....-. +.+.+ .++|+||.|
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~-p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a 82 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRH-PHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLA 82 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEEC
T ss_pred ceEEEEECCCChHHHHHHHHHHhC-CCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEEC
Confidence 689999996 99999999988875 688998886543 21111 1110 1111111 33344 789999988
Q ss_pred cCC
Q 024494 150 APP 152 (267)
Q Consensus 150 a~~ 152 (267)
.+.
T Consensus 83 ~p~ 85 (337)
T 3dr3_A 83 TAH 85 (337)
T ss_dssp SCH
T ss_pred CCh
Confidence 753
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00089 Score=58.23 Aligned_cols=64 Identities=20% Similarity=0.247 Sum_probs=50.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
+|+|+|+|.+|+.+++.|.+. |++|++.+|++++...+.+ .+.. ..+. +. .++|+||.+.+...
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~--g~~v~v~~r~~~~~~~l~~~~~~~--~~~~~~~-~~~Divi~~tp~~~ 183 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREA--GLEVWVWNRTPQRALALAEEFGLR--AVPLEKA-REARLLVNATRVGL 183 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHHTCE--ECCGGGG-GGCSEEEECSSTTT
T ss_pred eEEEECCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhccc--hhhHhhc-cCCCEEEEccCCCC
Confidence 899999999999999999999 9999999998766554432 2333 2232 34 78999999998763
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0052 Score=54.82 Aligned_cols=69 Identities=17% Similarity=0.040 Sum_probs=49.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhc----cCeee--e-cCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN----MGITP--S-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~----~~v~~--d-~~d~~~~~~~D~Vi~~a~ 151 (267)
|||.|+|+|.||+.++-.|..+ + -|+..+|..+++.+. +.. .+... . -.|.+.++++|+||.+||
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~--~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCCCHHHhCCCCEEEEecC
Confidence 7899999999999999999888 5 389999987644321 211 11111 1 234568999999999999
Q ss_pred CCCC
Q 024494 152 PSRS 155 (267)
Q Consensus 152 ~~~~ 155 (267)
..+.
T Consensus 79 ~prk 82 (294)
T 2x0j_A 79 LARK 82 (294)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6654
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0015 Score=60.30 Aligned_cols=68 Identities=21% Similarity=0.215 Sum_probs=53.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecC------------------------C-c
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK------------------------W-T 137 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~------------------------d-~ 137 (267)
...+|+|+|+|.+|..+++.+... |.+|++++|++++.+.+...|.+.... + .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 347999999999999999999999 999999999988776665555443110 1 1
Q ss_pred cccCCCCEEEEccCC
Q 024494 138 EATQKFPYVIFCAPP 152 (267)
Q Consensus 138 ~~~~~~D~Vi~~a~~ 152 (267)
+.+.++|+||.++..
T Consensus 261 e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 261 DAITKFDIVITTALV 275 (381)
T ss_dssp HHHTTCSEEEECCCC
T ss_pred HHHhcCCEEEECCCC
Confidence 367899999998753
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=60.60 Aligned_cols=92 Identities=11% Similarity=0.032 Sum_probs=52.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhcc-----------CeeeecCCccccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-----------GITPSLKWTEATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~~-----------~v~~d~~d~~~~~~~D~Vi~ 148 (267)
++||.|+|+ |++|+.|.+.|.+ +|..++..+..+.. +.....++ +....-.+++.+.++|+||.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDvvf~ 85 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDIIFS 85 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCEEEE
Confidence 368999996 9999999997655 47788887754322 11111011 11111123345679999999
Q ss_pred ccCCCCCCChHHHHHHHHHHhCCCCcEEEEcCCc
Q 024494 149 CAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (267)
Q Consensus 149 ~a~~~~~~~~~~~~~~l~~~~~~v~r~V~~SS~~ 182 (267)
|.+.....+++ ..+ . ..| .++|-+|+..
T Consensus 86 a~p~~~s~~~a---~~~-~-~~G-~~vIDlSa~~ 113 (359)
T 4dpl_A 86 PLPQGAAGPVE---EQF-A-KEG-FPVISNSPDH 113 (359)
T ss_dssp CCCTTTHHHHH---HHH-H-HTT-CEEEECSSTT
T ss_pred CCChHHHHHHH---HHH-H-HCC-CEEEEcCCCc
Confidence 98765322111 111 1 123 4677777753
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=60.60 Aligned_cols=91 Identities=11% Similarity=0.035 Sum_probs=52.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC---Cchhhhcc-----------CeeeecCCccccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD---HHDELINM-----------GITPSLKWTEATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~---~~~~l~~~-----------~v~~d~~d~~~~~~~D~Vi~ 148 (267)
++||.|+|+ |++|+.|.+.|.+ +|..++..+..+.. +.....++ +....-.+++.+.++|+||.
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~-hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~~~~~~~~vDvvf~ 85 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSN-HPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDDVDIIFS 85 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTT-CSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEECCGGGCTTCCEEEE
T ss_pred CCeEEEECCCCHHHHHHHHHHHh-CCCceEEEEECchhcCCChhHhcccccccccccccccceEEeCCHHHhcCCCEEEE
Confidence 368999996 9999999997655 47788887754322 11111011 11111123345679999999
Q ss_pred ccCCCCCCChHHHHHHHHHHhCCCCcEEEEcCC
Q 024494 149 CAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSS 181 (267)
Q Consensus 149 ~a~~~~~~~~~~~~~~l~~~~~~v~r~V~~SS~ 181 (267)
|.+.....+++ ..+ . ..| .++|-+|+.
T Consensus 86 a~p~~~s~~~a---~~~-~-~~G-~~vIDlSa~ 112 (359)
T 4dpk_A 86 PLPQGAAGPVE---EQF-A-KEG-FPVISNSPD 112 (359)
T ss_dssp CCCTTTHHHHH---HHH-H-HTT-CEEEECSST
T ss_pred CCChHHHHHHH---HHH-H-HCC-CEEEEcCCC
Confidence 98765322111 111 1 123 467777775
|
| >2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0012 Score=59.19 Aligned_cols=63 Identities=19% Similarity=0.152 Sum_probs=49.1
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
...++|.|+|.|.||+.+++.|... |++|++.+|+++... + ...+. +.+.++|+|+.+++...
T Consensus 142 l~g~~vgIIG~G~IG~~~A~~l~~~--G~~V~~~d~~~~~~~------~--~~~~l~ell~~aDvV~l~~p~~~ 205 (311)
T 2cuk_A 142 LQGLTLGLVGMGRIGQAVAKRALAF--GMRVVYHARTPKPLP------Y--PFLSLEELLKEADVVSLHTPLTP 205 (311)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSS------S--CBCCHHHHHHHCSEEEECCCCCT
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHC--CCEEEEECCCCcccc------c--ccCCHHHHHhhCCEEEEeCCCCh
Confidence 3448999999999999999999999 999999999876542 1 12222 35678999999887653
|
| >3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0034 Score=56.39 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=52.9
Q ss_pred CCeEEEEcccHHhHH-HHHHHHhcCCCCeEEEEeCCCC--CchhhhccCeeeecC-Ccccc--CCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTAD--HHDELINMGITPSLK-WTEAT--QKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~-La~~L~~~~pG~~V~~l~R~~~--~~~~l~~~~v~~d~~-d~~~~--~~~D~Vi~~a~~~~ 154 (267)
||+|.|+|.|-.|.. +++.|+++ |++|++.|+++. ....+.+.|+..... +++.+ .++|.||...+...
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~--G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~~~~~l~~~~~d~vV~Spgi~~ 78 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEA--GFEVSGCDAKMYPPMSTQLEALGIDVYEGFDAAQLDEFKADVYVIGNVAKR 78 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHT--TCEEEEEESSCCTTHHHHHHHTTCEEEESCCGGGGGSCCCSEEEECTTCCT
T ss_pred CcEEEEEEECHHHHHHHHHHHHhC--CCEEEEEcCCCCcHHHHHHHhCCCEEECCCCHHHcCCCCCCEEEECCCcCC
Confidence 689999999999995 89999999 999999998754 234566667776543 33344 47999999887643
|
| >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00068 Score=60.59 Aligned_cols=70 Identities=11% Similarity=0.110 Sum_probs=48.6
Q ss_pred CCCeEEEEcccHHhH-HHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeee-ecCCcccc-CCCCEEEEccCCC
Q 024494 83 GENDLLIVGPGVLGR-LVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP-SLKWTEAT-QKFPYVIFCAPPS 153 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~-~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~-d~~d~~~~-~~~D~Vi~~a~~~ 153 (267)
||++|.|+|+|.+|+ .+++.|.+. |+.+|++.++++++...+.+ .++.. ...+.+.+ .++|+|+.|.++.
T Consensus 1 m~~~igiIG~G~ig~~~~~~~l~~~-~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~~~~~l~~~~D~V~i~tp~~ 74 (323)
T 1xea_A 1 MSLKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD 74 (323)
T ss_dssp -CEEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG
T ss_pred CCcEEEEECCCHHHHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHcCCCccccCHHHHhhcCCCEEEEECCch
Confidence 457999999999998 588988765 47888877888776654432 34432 11222344 6899999998754
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0011 Score=58.86 Aligned_cols=66 Identities=21% Similarity=0.268 Sum_probs=50.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCee-eecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGIT-PSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~-~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
.++++|+|+|-.|++++..|.+. |. +|++++|+.++...+.. .+. ....+...+ ++|+||++.+..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~--G~~~v~v~nRt~~ka~~La~-~~~~~~~~~l~~l-~~DivInaTp~G 189 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDN--FAKDIYVVTRNPEKTSEIYG-EFKVISYDELSNL-KGDVIINCTPKG 189 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHT--TCSEEEEEESCHHHHHHHCT-TSEEEEHHHHTTC-CCSEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHc--CCCEEEEEeCCHHHHHHHHH-hcCcccHHHHHhc-cCCEEEECCccC
Confidence 47899999999999999999999 98 99999999887766643 221 122222124 899999998754
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0028 Score=54.49 Aligned_cols=64 Identities=14% Similarity=0.121 Sum_probs=46.1
Q ss_pred CeEEEEcc-----------------cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee-eecCCc--------c
Q 024494 85 NDLLIVGP-----------------GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT-PSLKWT--------E 138 (267)
Q Consensus 85 ~~ILV~Ga-----------------G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~-~d~~d~--------~ 138 (267)
++|||||. |.+|.+++++|.++ |++|+.+++... .. . ..+++ .++.+. +
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~--Ga~V~l~~~~~~-l~-~-~~g~~~~dv~~~~~~~~~v~~ 83 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARR--GANVTLVSGPVS-LP-T-PPFVKRVDVMTALEMEAAVNA 83 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHT--TCEEEEEECSCC-CC-C-CTTEEEEECCSHHHHHHHHHH
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHC--CCEEEEEECCcc-cc-c-CCCCeEEccCcHHHHHHHHHH
Confidence 78999964 89999999999999 999999987642 11 1 12332 233332 2
Q ss_pred ccCCCCEEEEccCCC
Q 024494 139 ATQKFPYVIFCAPPS 153 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~ 153 (267)
.+.++|++|++|+..
T Consensus 84 ~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 84 SVQQQNIFIGCAAVA 98 (226)
T ss_dssp HGGGCSEEEECCBCC
T ss_pred hcCCCCEEEECCccc
Confidence 456799999999865
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0015 Score=60.07 Aligned_cols=70 Identities=14% Similarity=0.109 Sum_probs=40.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhc-CCCCeEEEEeCCCCCchhhhccCeeeec--CCccccCCCCEEEEccCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQE-HPGCQIYGQTMTADHHDELINMGITPSL--KWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~-~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~~~~~~~D~Vi~~a~~ 152 (267)
|++||.|+|+ |++|+.|++.|.++ +|..++..++-.......+...+.+..+ .+++.+.++|+||.|++.
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~ 74 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGS 74 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCH
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCHHHhcCCCEEEECCCh
Confidence 4579999996 99999999988876 1333555554322111111111222222 223346788999988753
|
| >1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0012 Score=60.22 Aligned_cols=68 Identities=15% Similarity=0.063 Sum_probs=50.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|.|+|.|.||+.+++.|... |++|++.+|++.... ....++... .+. +.+.++|+|+.+++...
T Consensus 167 ~g~tvGIIG~G~IG~~vA~~l~~~--G~~V~~~d~~~~~~~-~~~~g~~~~-~~l~ell~~aDvV~l~~P~t~ 235 (347)
T 1mx3_A 167 RGETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGV-ERALGLQRV-STLQDLLFHSDCVTLHCGLNE 235 (347)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTH-HHHHTCEEC-SSHHHHHHHCSEEEECCCCCT
T ss_pred CCCEEEEEeECHHHHHHHHHHHHC--CCEEEEECCCcchhh-HhhcCCeec-CCHHHHHhcCCEEEEcCCCCH
Confidence 348999999999999999999998 999999998765421 122344321 122 45678999999887653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 267 | |||
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.89 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.89 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.88 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.87 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.86 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.85 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.84 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.83 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.82 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.82 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.82 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.81 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.8 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.79 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.79 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.78 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.78 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.75 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.75 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.74 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.73 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.71 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.71 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.69 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.66 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.6 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.59 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.55 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.52 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.21 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.84 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.74 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.71 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.69 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.68 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.67 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.66 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.64 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.62 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.61 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.61 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.6 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.58 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.55 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.53 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.53 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.52 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.51 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.51 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.5 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.49 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.49 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.48 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.48 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.47 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.47 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.46 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.45 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.45 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.44 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.44 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.43 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.42 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.4 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.4 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.39 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.38 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.38 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.36 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.35 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.35 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 98.34 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 98.31 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.29 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 98.29 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.29 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 98.29 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.29 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 98.27 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.27 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.27 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 98.23 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.23 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 98.21 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.18 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.17 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.17 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 98.14 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 98.12 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.12 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 98.09 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.09 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.06 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 98.06 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.99 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.99 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.99 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.98 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.98 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.94 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.91 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.87 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.87 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.83 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.82 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.79 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.76 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 97.76 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 97.72 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.72 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.7 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.66 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.59 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.58 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.57 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.56 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 97.55 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.48 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.48 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.47 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 97.47 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.45 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.44 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.4 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.38 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 97.34 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.33 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.32 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.3 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.29 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.28 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.24 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.24 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.22 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.21 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.16 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 97.12 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 97.1 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 97.09 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.08 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.08 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.04 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.04 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.03 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.01 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.01 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.0 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.99 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 96.85 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.85 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.81 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.81 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 96.8 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.8 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.79 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.77 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.74 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.72 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 96.7 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 96.69 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 96.62 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.61 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.58 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.58 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 96.56 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.56 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 96.51 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.5 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.47 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.46 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 96.43 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.43 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.39 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.38 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.34 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.33 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.3 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.3 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.28 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 96.26 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.23 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.23 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.19 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.18 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.17 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 96.16 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 96.15 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.14 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 96.11 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.11 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.1 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.09 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.07 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 96.07 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.06 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.06 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.05 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 96.05 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 96.04 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 96.03 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.02 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 96.01 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 95.99 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 95.99 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.99 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 95.97 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 95.97 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.96 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.94 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 95.92 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 95.92 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.89 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 95.88 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.84 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.84 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.82 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.81 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.79 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.76 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 95.76 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.75 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 95.73 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.73 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.68 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.59 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 95.59 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.57 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 95.55 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 95.54 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 95.47 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 95.38 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 95.37 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 95.35 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.34 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.34 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.3 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.27 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 95.14 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 95.08 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 95.03 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 95.01 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 94.96 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 94.86 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 94.84 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.84 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 94.67 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.65 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.61 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 94.6 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 94.43 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 94.32 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 94.29 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 94.05 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 94.0 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 93.86 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 93.84 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 93.83 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.77 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 93.77 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.68 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 93.66 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 93.65 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 93.42 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 93.24 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 93.12 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 93.1 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.08 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 92.81 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 92.72 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.68 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 92.67 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 92.67 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 92.59 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 92.56 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 92.39 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 92.23 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.87 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 91.77 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.29 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.15 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 90.86 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 90.29 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 90.14 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 89.72 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 89.7 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 89.57 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 89.32 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 89.31 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 89.29 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 89.19 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 89.16 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 89.02 | |
| d1m6ia1 | 213 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 88.82 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 88.81 | |
| d1ps9a2 | 162 | 2,4-dienoyl-CoA reductase, C-terminal domain {Esch | 88.76 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 88.67 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.64 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 88.4 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 88.32 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 88.01 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 87.38 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 87.02 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 87.0 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 86.87 | |
| d2gjca1 | 311 | Thiazole biosynthetic enzyme Thi4 {Baker's yeast ( | 86.5 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 86.18 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 85.88 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 85.51 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 85.39 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 85.1 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 84.95 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.81 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 84.7 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 84.64 | |
| d1qmga2 | 226 | Class II ketol-acid reductoisomerase (KARI) {Spina | 84.53 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 84.41 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 83.38 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 83.35 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 82.97 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 82.05 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 81.27 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 80.78 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 80.53 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 80.5 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 80.28 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 80.16 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=4.9e-23 Score=183.65 Aligned_cols=175 Identities=17% Similarity=0.133 Sum_probs=121.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhhhc--cCeeeecCCc----cccCCCCEEEEccCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELIN--MGITPSLKWT----EATQKFPYVIFCAPPSRS- 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l~~--~~v~~d~~d~----~~~~~~D~Vi~~a~~~~~- 155 (267)
+||||||+ ||||++|+++|+++ |++|++++|... ....+.. .....++.+. ....++|+|||+|+....
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~~ 79 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMD--GHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPP 79 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCch
Confidence 78999996 99999999999999 999999987432 2222211 1122333221 245689999999986542
Q ss_pred ---CC-------hHHHHHHHHHHh--CCCCcEEEEcCCccccCCCCCccCCC-----CCCCCCCCCHHHHHHHHHHHHHH
Q 024494 156 ---LD-------YPGDVRLAALSW--NGEGSFLFTSSSAIYDCSDNGACDED-----SPVVPIGRSPRTDVLLKAEKVIL 218 (267)
Q Consensus 156 ---~~-------~~~~~~~l~~~~--~~v~r~V~~SS~~VYg~~~~~~~~E~-----~p~~p~~~~~y~~~k~~aE~~l~ 218 (267)
.+ ++.++.+++.+. .+ .++||+||..|||.....+++|+ +|..| .+.|+.+|+++|.+++
T Consensus 80 ~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p--~~~Y~~sK~~~E~~~~ 156 (312)
T d2b69a1 80 NYMYNPIKTLKTNTIGTLNMLGLAKRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP--RACYDEGKRVAETMCY 156 (312)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST--THHHHHHHHHHHHHHH
T ss_pred hHHhCHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEChheecCCCCCCCCccccCCCCCCCC--ccHHHHHHHHHHHHHH
Confidence 11 233455554322 24 48999999999998665555554 45555 4689999999999987
Q ss_pred Hc----C--eeEEeeCccccCCc---------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 219 EF----G--GCVLRLAGLYISLC---------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 219 ~~----~--~~IlR~~~iyGp~~---------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
.+ + +++|||+++|||+. .++.++ .|+++.+. ++.+..++||.-+++
T Consensus 157 ~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~ 219 (312)
T d2b69a1 157 AYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 219 (312)
T ss_dssp HHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred HHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHH
Confidence 64 3 89999999999972 234444 58888664 455778899876653
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=9.7e-23 Score=184.94 Aligned_cols=175 Identities=20% Similarity=0.119 Sum_probs=119.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhh------ccCe---eeecCCcc----ccC--CC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI------NMGI---TPSLKWTE----ATQ--KF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~------~~~v---~~d~~d~~----~~~--~~ 143 (267)
|++||||+ ||||++|+++|+++ ||+|++++|.... ...+. ..++ +.|+.|.+ .+. ++
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEK--GYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQP 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCC
Confidence 67899995 99999999999999 9999999995431 11111 1122 34555542 222 67
Q ss_pred CEEEEccCCCCCC----C-------hHHHHHHHHHHh--C---CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 144 PYVIFCAPPSRSL----D-------YPGDVRLAALSW--N---GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 144 D~Vi~~a~~~~~~----~-------~~~~~~~l~~~~--~---~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
|+|||+|+..... + ++.++.+++.+. . +++||||+||..|||.+...+++|++|..|. ++|+
T Consensus 80 d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~--~~Y~ 157 (357)
T d1db3a_ 80 DEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPR--SPYA 157 (357)
T ss_dssp SEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCC--SHHH
T ss_pred CEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCC--ChHH
Confidence 9999999865432 1 233455554322 2 3457999999999998777889999999884 7999
Q ss_pred HHHHHHHHHHHHc----C--eeEEeeCccccCCc-------h---HHHHH-hCCc-c-eecCCCccccHHHHHHh
Q 024494 208 DVLLKAEKVILEF----G--GCVLRLAGLYISLC-------Y---LVEKF-QGLP-L-LLKSPGIFSANWHYICV 263 (267)
Q Consensus 208 ~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~---~l~~~-~g~~-v-~~~~~~~~~n~IH~~~~ 263 (267)
.+|+++|++++.+ + ++++||+++|||+. . ++..+ .+++ . ..+++.+..+++|..++
T Consensus 158 ~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~ 232 (357)
T d1db3a_ 158 VAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDY 232 (357)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechH
Confidence 9999999998875 3 89999999999961 1 22222 3433 3 33445567777776554
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.88 E-value=5.9e-23 Score=183.22 Aligned_cols=176 Identities=18% Similarity=0.148 Sum_probs=125.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEE------EEeCC--CCCchhhhc----cCeee---ecCCc----cccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIY------GQTMT--ADHHDELIN----MGITP---SLKWT----EATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~------~l~R~--~~~~~~l~~----~~v~~---d~~d~----~~~~~~D 144 (267)
|||||||+ ||||++|+++|+++ ||+|. ++++. ......+.. ..++. |..+. .....+|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~--g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d 78 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAG--AYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD 78 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--SCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccc
Confidence 68999995 99999999999999 88654 44432 111111111 22333 33332 3567899
Q ss_pred EEEEccCCCCCCC-----------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHH
Q 024494 145 YVIFCAPPSRSLD-----------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLL 211 (267)
Q Consensus 145 ~Vi~~a~~~~~~~-----------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~ 211 (267)
+|+|+|+...... ++.++.+++.+ ..++++|||+||+.+||.....+++|++|..|. +.|+.+|.
T Consensus 79 ~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~--~~Y~~sK~ 156 (322)
T d1r6da_ 79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPN--SPYAASKA 156 (322)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCC--SHHHHHHH
T ss_pred eEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCC--CHHHHHHH
Confidence 9999998764311 22334455432 347899999999999999888889999999985 79999999
Q ss_pred HHHHHHHHc----C--eeEEeeCccccCCc-------hHHHHH-hCCcceec-CCCccccHHHHHHhh
Q 024494 212 KAEKVILEF----G--GCVLRLAGLYISLC-------YLVEKF-QGLPLLLK-SPGIFSANWHYICVK 264 (267)
Q Consensus 212 ~aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~~-~~~~~~n~IH~~~~~ 264 (267)
.+|.+++.+ + +++|||+++|||+. .++.++ .|+++.+. .+.+..++||..+++
T Consensus 157 ~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a 224 (322)
T d1r6da_ 157 GSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHC 224 (322)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHH
Confidence 999998764 3 89999999999983 234444 47887664 445788899976654
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=8.1e-22 Score=176.89 Aligned_cols=177 Identities=16% Similarity=0.076 Sum_probs=127.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh---hh-------ccCee---eecCCc----cccCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE---LI-------NMGIT---PSLKWT----EATQKF 143 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~---l~-------~~~v~---~d~~d~----~~~~~~ 143 (267)
++|+|||||+ ||||++|+++|+++ ||+|++++|.... ... +. ...++ .|..|. ....+.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 92 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKL--DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV 92 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccc
Confidence 3478999995 99999999999999 9999999974321 111 11 11232 234443 245788
Q ss_pred CEEEEccCCCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 144 PYVIFCAPPSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 144 D~Vi~~a~~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
+.|+|+++...... ++.+..+++. ...++++|||+||+.|||.....+.+|++|..|. +.|+.+|
T Consensus 93 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~--~~Y~~sK 170 (341)
T d1sb8a_ 93 DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPL--SPYAVTK 170 (341)
T ss_dssp SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCC--SHHHHHH
T ss_pred cccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCC--CcchHHH
Confidence 99999988654211 2344555543 2357889999999999998888889999999884 7999999
Q ss_pred HHHHHHHHHc----C--eeEEeeCccccCCc-----------hHHHHH-hCCcceecC-CCccccHHHHHHh
Q 024494 211 LKAEKVILEF----G--GCVLRLAGLYISLC-----------YLVEKF-QGLPLLLKS-PGIFSANWHYICV 263 (267)
Q Consensus 211 ~~aE~~l~~~----~--~~IlR~~~iyGp~~-----------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~ 263 (267)
+++|+.++.+ + ++|+||+++||++. .++..+ .|+++.+.+ +.+..+++|.-++
T Consensus 171 ~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~ 242 (341)
T d1sb8a_ 171 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242 (341)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEecc
Confidence 9999988764 2 89999999999961 122333 588876654 4577788885543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=1.7e-21 Score=174.33 Aligned_cols=175 Identities=17% Similarity=0.067 Sum_probs=120.9
Q ss_pred CeE-EEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-----hhhh-------ccCe---eeecCCcc----c--cC
Q 024494 85 NDL-LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-----DELI-------NMGI---TPSLKWTE----A--TQ 141 (267)
Q Consensus 85 ~~I-LV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-----~~l~-------~~~v---~~d~~d~~----~--~~ 141 (267)
+|| ||||+ ||||++|+++|+++ ||+|++++|.+... +.+. ..++ ..|+.|++ . -.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~--g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEK--GYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV 78 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence 578 99996 99999999999999 99999999965321 1111 0122 23555542 1 24
Q ss_pred CCCEEEEccCCCCCCC-----------hHHHHHHHHHH--hC---CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 142 KFPYVIFCAPPSRSLD-----------YPGDVRLAALS--WN---GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~-----------~~~~~~~l~~~--~~---~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
++++|+|+++...... ++.++.+++.+ .. +.++|||+||..|||.....+++|++|..|. ++
T Consensus 79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~--~~ 156 (347)
T d1t2aa_ 79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPR--SP 156 (347)
T ss_dssp CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCC--SH
T ss_pred ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCC--CH
Confidence 6889999988654311 12234444322 22 3458999999999998777789999999884 79
Q ss_pred HHHHHHHHHHHHHHc----C--eeEEeeCccccCCc-------hHHH----HH-hCCcce-ecCCCccccHHHHHHh
Q 024494 206 RTDVLLKAEKVILEF----G--GCVLRLAGLYISLC-------YLVE----KF-QGLPLL-LKSPGIFSANWHYICV 263 (267)
Q Consensus 206 y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l~----~~-~g~~v~-~~~~~~~~n~IH~~~~ 263 (267)
|+.+|+++|++++.+ + ++++|++++|||+. .+.. .. .+.+.. .+++.+..+++|..++
T Consensus 157 Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~ 233 (347)
T d1t2aa_ 157 YGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDY 233 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHH
Confidence 999999999998765 3 89999999999961 2222 22 244443 3455577777776654
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.85 E-value=1e-20 Score=170.76 Aligned_cols=177 Identities=14% Similarity=0.065 Sum_probs=120.2
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCee---eecCCc----cccCCCCEEEEccCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGIT---PSLKWT----EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~---~d~~d~----~~~~~~D~Vi~~a~~~~~ 155 (267)
.|||||||+ ||||++|+++|+++ ||+|+++++.............+ .|+.+. ..+.++|+|||+|+....
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~ 92 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHE--GHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGG 92 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeeccccccc
Confidence 489999985 99999999999999 99999998754432111112222 344443 356789999999986543
Q ss_pred C----C--------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCc-------cCCCCCCCCCCCCHHHHHHHHHH
Q 024494 156 L----D--------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGA-------CDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 156 ~----~--------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~-------~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
. . ++.++.+++. ...++++||++||..+|+.....+ .+|.+|..|. +.|+.+|+++|
T Consensus 93 ~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~--~~Yg~sK~~~E 170 (363)
T d2c5aa1 93 MGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ--DAFGLEKLATE 170 (363)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS--SHHHHHHHHHH
T ss_pred ccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCC--CHHHHHHHHHH
Confidence 1 1 2233444433 235899999999999998754433 3345566664 68999999999
Q ss_pred HHHHHc----C--eeEEeeCccccCCc-------hHH-----HHH-hCCcc-eecCCCccccHHHHHHhh
Q 024494 215 KVILEF----G--GCVLRLAGLYISLC-------YLV-----EKF-QGLPL-LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 215 ~~l~~~----~--~~IlR~~~iyGp~~-------~~l-----~~~-~g~~v-~~~~~~~~~n~IH~~~~~ 264 (267)
++++.+ + +++|||+++||++. ... ... ...+. ...++.+...+||..+++
T Consensus 171 ~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~ 240 (363)
T d2c5aa1 171 ELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECV 240 (363)
T ss_dssp HHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHH
Confidence 998764 3 89999999999972 111 111 23333 334455788888876543
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.84 E-value=5e-21 Score=174.04 Aligned_cols=176 Identities=13% Similarity=0.067 Sum_probs=117.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeE-EEEeCCCCC--chhhhc----cCee---eecCCccc----c--CCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQI-YGQTMTADH--HDELIN----MGIT---PSLKWTEA----T--QKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V-~~l~R~~~~--~~~l~~----~~v~---~d~~d~~~----~--~~~D~Vi 147 (267)
|||||||+ ||||++|+++|+++ ||+| +++++.... ...+.. .+++ .|+.|+.. + .++|+||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~--g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKN--TQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM 78 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHH--CSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 68999995 99999999999999 9975 555543211 111111 1333 46666532 2 3689999
Q ss_pred EccCCCCCCC-----------hHHHHHHHHHHh-----------CCCCcEEEEcCCccccCCCCC----------ccCCC
Q 024494 148 FCAPPSRSLD-----------YPGDVRLAALSW-----------NGEGSFLFTSSSAIYDCSDNG----------ACDED 195 (267)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~l~~~~-----------~~v~r~V~~SS~~VYg~~~~~----------~~~E~ 195 (267)
|||+...... ++.++.+++... .++++|||+||..|||..... ..+|+
T Consensus 79 hlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~ 158 (361)
T d1kewa_ 79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET 158 (361)
T ss_dssp ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred ECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccC
Confidence 9998754211 122233333211 145799999999999875332 23455
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc-------hHHHHH-hCCcceec-CCCccccHHHH
Q 024494 196 SPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC-------YLVEKF-QGLPLLLK-SPGIFSANWHY 260 (267)
Q Consensus 196 ~p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~~-~~~~~~n~IH~ 260 (267)
++..| .+.||.+|+++|++++.+ + +++||++++|||+. .++..+ +|+++.+. ++.+..+++|.
T Consensus 159 ~~~~p--~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v 236 (361)
T d1kewa_ 159 TAYAP--SSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp SCCCC--CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred CCCCC--CCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence 66666 478999999999998874 3 89999999999982 233444 48887664 44577788886
Q ss_pred HHhh
Q 024494 261 ICVK 264 (267)
Q Consensus 261 ~~~~ 264 (267)
.+++
T Consensus 237 ~D~a 240 (361)
T d1kewa_ 237 EDHA 240 (361)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.83 E-value=1.3e-20 Score=166.60 Aligned_cols=138 Identities=17% Similarity=0.124 Sum_probs=101.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc------cccCCCCEEEEccCCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT------EATQKFPYVIFCAPPSRSL 156 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~------~~~~~~D~Vi~~a~~~~~~ 156 (267)
.+||||||+ ||||++|+++|+++ |++|+++++..+. ++.|. -...++|+|+|+|+.....
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~--g~~vi~~~~~~~~-----------~~~~~~~~~~~~~~~~~d~v~~~a~~~~~~ 68 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQR--GDVELVLRTRDEL-----------NLLDSRAVHDFFASERIDQVYLAAAKVGGI 68 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTC--TTEEEECCCTTTC-----------CTTCHHHHHHHHHHHCCSEEEECCCCCCCH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--cCEEEEecCchhc-----------cccCHHHHHHHHhhcCCCEEEEcchhcccc
Confidence 378999996 99999999999999 9999887654321 22221 1234689999999765321
Q ss_pred -----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC---CCHHHHHHHHHHHHHHH
Q 024494 157 -----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG---RSPRTDVLLKAEKVILE 219 (267)
Q Consensus 157 -----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~---~~~y~~~k~~aE~~l~~ 219 (267)
+ ++.++.+++.+ ..++++|||+||.+|||.....+++|+.+..... .+.|+.+|+++|+.++.
T Consensus 69 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~ 148 (315)
T d1e6ua_ 69 VANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCES 148 (315)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 1 23344455432 3588999999999999987767788876543221 24799999999999876
Q ss_pred c----C--eeEEeeCccccCC
Q 024494 220 F----G--GCVLRLAGLYISL 234 (267)
Q Consensus 220 ~----~--~~IlR~~~iyGp~ 234 (267)
+ + ++||||+++|||+
T Consensus 149 ~~~~~gl~~~ilR~~~vyGp~ 169 (315)
T d1e6ua_ 149 YNRQYGRDYRSVMPTNLYGPH 169 (315)
T ss_dssp HHHHHCCEEEEEEECEEESTT
T ss_pred HHHHhCCCEEEEeeccEECCC
Confidence 4 3 8999999999996
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=8.2e-20 Score=153.20 Aligned_cols=141 Identities=14% Similarity=0.035 Sum_probs=107.2
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee---ecCCc----cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP---SLKWT----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~---d~~d~----~~~~~~D~Vi~~a~~~~ 154 (267)
.|+||+|+|+ |+||++++++|+++ ||+|++++|++++.+.....+++. |+.|. +++.++|+||++++...
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~ 79 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQA--GYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRN 79 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHC--cCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCC
Confidence 4789999996 99999999999999 999999999988765554445544 44444 36789999999998654
Q ss_pred CCC----hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEe
Q 024494 155 SLD----YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLR 226 (267)
Q Consensus 155 ~~~----~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR 226 (267)
... +.+..++++. ...+++|||++||.++|++... . +.....|.+.|.++|+.+++.+ |+|+|
T Consensus 80 ~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~------~---~~~~~~~~~~~~~~e~~l~~~~~~~tiir 150 (205)
T d1hdoa_ 80 DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTK------V---PPRLQAVTDDHIRMHKVLRESGLKYVAVM 150 (205)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTC------S---CGGGHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcc------c---cccccccchHHHHHHHHHHhcCCceEEEe
Confidence 321 4555666553 3458999999999999875431 1 1112367888999999999988 99999
Q ss_pred eCccccCC
Q 024494 227 LAGLYISL 234 (267)
Q Consensus 227 ~~~iyGp~ 234 (267)
|+.+++..
T Consensus 151 p~~~~~~~ 158 (205)
T d1hdoa_ 151 PPHIGDQP 158 (205)
T ss_dssp CSEEECCC
T ss_pred cceecCCC
Confidence 99998653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.82 E-value=3.9e-20 Score=163.65 Aligned_cols=176 Identities=18% Similarity=0.078 Sum_probs=122.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhhhcc----Ce---eeecCCcc------ccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELINM----GI---TPSLKWTE------ATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l~~~----~v---~~d~~d~~------~~~~~D~Vi~ 148 (267)
++|||||+ ||||++|+++|+++ ||+|++++|..... ..+... ++ ..|+.|.+ .....++++|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~--g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 78 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEK--GYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 78 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence 58999996 99999999999999 99999999975432 222211 22 34566542 1235778888
Q ss_pred ccCCCCCC----C-------hHHHHHHHHHH--hCC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 149 CAPPSRSL----D-------YPGDVRLAALS--WNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 149 ~a~~~~~~----~-------~~~~~~~l~~~--~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
++...... + ++.++.+++.+ ..+ .++|++.||..+||.....+.+|++|..|. +.|+.+|+++|
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~--~~Y~~sK~~~E 156 (321)
T d1rpna_ 79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPR--SPYGVAKLYGH 156 (321)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC--SHHHHHHHHHH
T ss_pred ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCcccc--ChhHHHHHHHH
Confidence 88765421 1 12334455432 224 568999999999998877889999999885 79999999999
Q ss_pred HHHHHc----C--eeEEeeCccccCCc-------hH---HHHH-hCC-c-ceecCCCccccHHHHHHhh
Q 024494 215 KVILEF----G--GCVLRLAGLYISLC-------YL---VEKF-QGL-P-LLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 215 ~~l~~~----~--~~IlR~~~iyGp~~-------~~---l~~~-~g~-~-v~~~~~~~~~n~IH~~~~~ 264 (267)
+++..+ + ++++||+++|||.. .+ +.++ .++ + +..+++.++.+++|..+++
T Consensus 157 ~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~ 225 (321)
T d1rpna_ 157 WITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYV 225 (321)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHH
T ss_pred HHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHH
Confidence 998764 3 89999999999961 12 2223 333 3 3345566788888866553
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.82 E-value=3.4e-20 Score=166.61 Aligned_cols=177 Identities=10% Similarity=0.077 Sum_probs=118.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC----CCc---hhhhccCe---eeecCCc----cccCCCCEEE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA----DHH---DELINMGI---TPSLKWT----EATQKFPYVI 147 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~----~~~---~~l~~~~v---~~d~~d~----~~~~~~D~Vi 147 (267)
.||||||||+ ||||++|+++|+++ |++|.++.++. ... ..+...++ ..|+.|. ....++|.|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~--g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~ 78 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNN--HPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIV 78 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHH--CTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHC--CCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhh
Confidence 3899999995 99999999999999 88765554421 111 11222233 3455554 3567899999
Q ss_pred EccCCCCCCC-----------hHHHHHHHHHHh-CCCCcEEEEcCCccccCC------------CCCccCCCCCCCCCCC
Q 024494 148 FCAPPSRSLD-----------YPGDVRLAALSW-NGEGSFLFTSSSAIYDCS------------DNGACDEDSPVVPIGR 203 (267)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~l~~~~-~~v~r~V~~SS~~VYg~~------------~~~~~~E~~p~~p~~~ 203 (267)
|+|+...... ++.++.+++... ....++|++||..+||.. .....+|+++..|.
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~-- 156 (346)
T d1oc2a_ 79 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPS-- 156 (346)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCC--
T ss_pred hhhhcccccchhhCcccceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCC--
Confidence 9998764311 123344444322 223689999999999852 12356777777774
Q ss_pred CHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc-------hHHHHH-hCCccee-cCCCccccHHHHHHh
Q 024494 204 SPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC-------YLVEKF-QGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
+.|+.+|+++|++++.+ + ++||||+++|||+. .++.++ .|.+..+ ..+.+..++||.-++
T Consensus 157 s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~ 231 (346)
T d1oc2a_ 157 SPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDH 231 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhH
Confidence 68999999999988764 3 89999999999972 223333 4666644 445577788886544
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=1.3e-19 Score=162.43 Aligned_cols=146 Identities=17% Similarity=0.138 Sum_probs=105.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC----chh---hhccCe---eeecCCcc----cc--CCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH----HDE---LINMGI---TPSLKWTE----AT--QKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~----~~~---l~~~~v---~~d~~d~~----~~--~~~D~Vi 147 (267)
|||||||+ ||||++|+++|+++ ||+|++++|-... ... +...++ ..|+.|.+ .+ .++|+||
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vi 78 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQN--GHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEE
Confidence 78999996 99999999999999 9999999873221 111 111233 34565542 23 3799999
Q ss_pred EccCCCCCC----C-------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCC-CCCCCCHHHHHHHHH
Q 024494 148 FCAPPSRSL----D-------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPV-VPIGRSPRTDVLLKA 213 (267)
Q Consensus 148 ~~a~~~~~~----~-------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~-~p~~~~~y~~~k~~a 213 (267)
|+|+....+ + ++.++++++.. ..++++||++||..||+.....+..|+.+. .| .+.|+.+|+++
T Consensus 79 HlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p--~~~Y~~sK~~~ 156 (338)
T d1udca_ 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTP--QSPYGKSKLMV 156 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC--SSHHHHHHHHH
T ss_pred ECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCC--cchHHHHHhhh
Confidence 999865421 1 23445555432 247999999999999987765555555543 44 47999999999
Q ss_pred HHHHHHc-----C--eeEEeeCccccCC
Q 024494 214 EKVILEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 214 E~~l~~~-----~--~~IlR~~~iyGp~ 234 (267)
|+.+.++ + ++++|++++|||+
T Consensus 157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~ 184 (338)
T d1udca_ 157 EQILTDLQKAQPDWSIALLRYFNPVGAH 184 (338)
T ss_dssp HHHHHHHHHHSTTCEEEEEEECEEECCC
T ss_pred hHHHHHHHhhccCCeEEEEeeccEEecc
Confidence 9988753 2 7999999999985
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=3.8e-19 Score=158.17 Aligned_cols=175 Identities=15% Similarity=0.056 Sum_probs=115.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-----chhhh-------ccCee---eecCCcc------ccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-----HDELI-------NMGIT---PSLKWTE------ATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-----~~~l~-------~~~v~---~d~~d~~------~~~~ 142 (267)
+++||||+ ||||++|+++|+++ ||+|++++|.... ...+. ...+. .|+.+.+ ...+
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~ 79 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGK--GYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK 79 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred CEEEEeCCccHHHHHHHHHHHHC--cCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhc
Confidence 78999996 99999999999999 9999999995432 11111 11122 2444432 2247
Q ss_pred CCEEEEccCCCCCCC-----------hHHHHHHHHHH-------hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD-----------YPGDVRLAALS-------WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~-----------~~~~~~~l~~~-------~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
+|+|||+|+...... +..++.+++.+ .....++++.||..+|+... ...+|++|..|. +
T Consensus 80 ~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~-~~~~E~~~~~p~--~ 156 (339)
T d1n7ha_ 80 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP-PPQSETTPFHPR--S 156 (339)
T ss_dssp CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC-SSBCTTSCCCCC--S
T ss_pred cchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC-CCCCCCCCCCCc--c
Confidence 899999999754311 11112222211 12356788888888887654 578999999884 7
Q ss_pred HHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc-------hHH---HHH-hC-Ccc-eecCCCccccHHHHHHhh
Q 024494 205 PRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC-------YLV---EKF-QG-LPL-LLKSPGIFSANWHYICVK 264 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~-------~~l---~~~-~g-~~v-~~~~~~~~~n~IH~~~~~ 264 (267)
.|+.+|+.+|+++..+ + ++++||+++|||+. .+. ... .+ .+. ..+++.+..+++|..+++
T Consensus 157 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a 235 (339)
T d1n7ha_ 157 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYV 235 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHH
Confidence 9999999999988664 3 89999999999961 122 122 23 333 334455777888866543
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.79 E-value=1.6e-19 Score=156.11 Aligned_cols=163 Identities=17% Similarity=0.157 Sum_probs=119.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----ccc--CCCCEEEEccCCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----EAT--QKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----~~~--~~~D~Vi~~a~~~~~~~ 157 (267)
|||||||+ ||||++|+++|.++ ||+|++++|+.- |+.|. +.+ .++|+|||+++......
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~--g~~Vi~~~r~~~------------D~~d~~~~~~~l~~~~~d~vih~a~~~~~~~ 67 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGK--NVEVIPTDVQDL------------DITNVLAVNKFFNEKKPNVVINCAAHTAVDK 67 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTS--SEEEEEECTTTC------------CTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CCEEEEeechhc------------cCCCHHHHHHHHHHcCCCEEEeecccccccc
Confidence 78999996 99999999999999 999999998642 22222 112 36899999998765321
Q ss_pred ----hHH-------HHHHHHH-HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ee
Q 024494 158 ----YPG-------DVRLAAL-SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (267)
Q Consensus 158 ----~~~-------~~~~l~~-~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~ 223 (267)
... ....+.. .......+++.||..+|+.....+.+|+++..|. ..|++.|..+|+++++.+ .+
T Consensus 68 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~--~~~~~~k~~~e~~~~~~~~~~~ 145 (281)
T d1vl0a_ 68 CEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQ--SAYGKTKLEGENFVKALNPKYY 145 (281)
T ss_dssp HHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCC--SHHHHHHHHHHHHHHHHCSSEE
T ss_pred ccccchhhcccccccccccccccccccccccccccceeeeccccccccccccccch--hhhhhhhhHHHHHHHHhCCCcc
Confidence 010 1111111 1224678999999999998877888999888774 689999999999999987 89
Q ss_pred EEeeCccccCCch----HHHHH-hCCcceecCCCccccHHHHHHhh
Q 024494 224 VLRLAGLYISLCY----LVEKF-QGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 224 IlR~~~iyGp~~~----~l~~~-~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
|+|++++||++.. +++.+ ++.++.+. +.++.+++|..+++
T Consensus 146 i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~~ 190 (281)
T d1vl0a_ 146 IVRTAWLYGDGNNFVKTMINLGKTHDELKVV-HDQVGTPTSTVDLA 190 (281)
T ss_dssp EEEECSEESSSSCHHHHHHHHHHHCSEEEEE-SSCEECCEEHHHHH
T ss_pred ccceeEEeCCCcccccchhhhhccCCceeec-CCceeccchhhhhh
Confidence 9999999999943 34444 36665554 34677888866543
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=5.6e-19 Score=157.82 Aligned_cols=177 Identities=16% Similarity=0.163 Sum_probs=120.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCe---eeecCCc-----cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGI---TPSLKWT-----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v---~~d~~d~-----~~~~~~D~Vi~~a~~~ 153 (267)
|||||||+ ||||++|+++|+++ | ++|+++++.......+.. ..+ ..|+.+. ....++|+|||+|+..
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~--g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~ 78 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLRE--DHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA 78 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHS--TTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccc
Confidence 68999996 99999999999999 8 599999987654443322 233 3355443 1456899999999976
Q ss_pred CCCC-----------hHHHHHHHHHHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCC-----CCCHHHHHHHHHHHH
Q 024494 154 RSLD-----------YPGDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI-----GRSPRTDVLLKAEKV 216 (267)
Q Consensus 154 ~~~~-----------~~~~~~~l~~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~-----~~~~y~~~k~~aE~~ 216 (267)
.... ++.++.+++... ....++++.||..+|+.......+|+.+..+. +.+.|+.+|..+|++
T Consensus 79 ~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~ 158 (342)
T d2blla1 79 TPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRV 158 (342)
T ss_dssp CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHH
T ss_pred cccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchhhh
Confidence 5321 223344454322 23457789999999998765555544322111 135899999999999
Q ss_pred HHHc----C--eeEEeeCccccCCc---------------hHHHHH-hCCcceecC-CCccccHHHHHHh
Q 024494 217 ILEF----G--GCVLRLAGLYISLC---------------YLVEKF-QGLPLLLKS-PGIFSANWHYICV 263 (267)
Q Consensus 217 l~~~----~--~~IlR~~~iyGp~~---------------~~l~~~-~g~~v~~~~-~~~~~n~IH~~~~ 263 (267)
+..+ + ++++|++.+||+.. .++.++ .|+++.+.+ +.+..+++|..++
T Consensus 159 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~ 228 (342)
T d2blla1 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDG 228 (342)
T ss_dssp HHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHH
T ss_pred hhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccc
Confidence 8765 3 89999999999851 223334 588887654 4577788886654
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.78 E-value=9.2e-19 Score=157.19 Aligned_cols=146 Identities=17% Similarity=0.142 Sum_probs=105.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cch------hhhccCe---eeecCCcc------ccCCCCEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHD------ELINMGI---TPSLKWTE------ATQKFPYVI 147 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~------~l~~~~v---~~d~~d~~------~~~~~D~Vi 147 (267)
|.|||||+ ||||++|+++|+++ |++|+++++... ... .+...++ ..|+.|.+ ...++|+||
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~--g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 79 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIEN--GYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVI 79 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--cCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEE
Confidence 45999996 99999999999999 999999986322 111 1122233 34566542 224799999
Q ss_pred EccCCCCCCC-----------hHHHHHHHHHH--hCCCCcEEEEcCCccccCCC----CCccCCCCCCCCCCCCHHHHHH
Q 024494 148 FCAPPSRSLD-----------YPGDVRLAALS--WNGEGSFLFTSSSAIYDCSD----NGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 148 ~~a~~~~~~~-----------~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~----~~~~~E~~p~~p~~~~~y~~~k 210 (267)
|+|+...... ++.++.+++.+ ..++++||++||..|||... ..+++|+.+..|. +.|+.+|
T Consensus 80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~--~~Y~~sK 157 (347)
T d1z45a2 80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT--NPYGHTK 157 (347)
T ss_dssp ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC--SHHHHHH
T ss_pred EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCC--ChhHhHH
Confidence 9999764211 22333444332 34789999999999998653 2458888888884 6999999
Q ss_pred HHHHHHHHHc------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~------~--~~IlR~~~iyGp~ 234 (267)
.++|++++++ + +++||++++||+.
T Consensus 158 ~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~ 189 (347)
T d1z45a2 158 YAIENILNDLYNSDKKSWKFAILRYFNPIGAH 189 (347)
T ss_dssp HHHHHHHHHHHHHSTTSCEEEEEEECEEECCC
T ss_pred HHHHHHHHHHHHhhccCCcEEEEeecceEeec
Confidence 9999988764 2 7999999999874
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1e-18 Score=149.23 Aligned_cols=134 Identities=19% Similarity=0.145 Sum_probs=98.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhhccCeeee---cCCc----cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELINMGITPS---LKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~~~~v~~d---~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
+++|||||+ |+||++|+++|+++ | ++|++++|++..........++.+ ..+. +.+.++|+||||++..
T Consensus 14 ~k~IlItGaTG~iG~~l~~~Ll~~--g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 14 NKSVFILGASGETGRVLLKEILEQ--GLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHH--TCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhC--CCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccccc
Confidence 378999996 99999999999999 7 489999998765433222233333 3222 4678999999999865
Q ss_pred CCC----Ch----HHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024494 154 RSL----DY----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (267)
Q Consensus 154 ~~~----~~----~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-- 221 (267)
... .| .+...+++. ...++++|||+|+.++|+.. .+.|+++|.++|+.+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~---------------~~~Y~~~K~~~E~~l~~~~~~ 156 (232)
T d2bkaa1 92 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS---------------NFLYLQVKGEVEAKVEELKFD 156 (232)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC---------------SSHHHHHHHHHHHHHHTTCCS
T ss_pred ccccchhhhhhhcccccceeeecccccCccccccCCccccccCc---------------cchhHHHHHHhhhcccccccc
Confidence 321 11 122333332 23589999999999887532 2479999999999999976
Q ss_pred -eeEEeeCccccCC
Q 024494 222 -GCVLRLAGLYISL 234 (267)
Q Consensus 222 -~~IlR~~~iyGp~ 234 (267)
++||||+.+||++
T Consensus 157 ~~~IlRP~~i~G~~ 170 (232)
T d2bkaa1 157 RYSVFRPGVLLCDR 170 (232)
T ss_dssp EEEEEECCEEECTT
T ss_pred ceEEecCceeecCC
Confidence 8999999999997
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.75 E-value=2.8e-18 Score=154.02 Aligned_cols=176 Identities=14% Similarity=-0.000 Sum_probs=115.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-------cC----eeeecCCc----cccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-------MG----ITPSLKWT----EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-------~~----v~~d~~d~----~~~~~~D~Vi~ 148 (267)
++|||||+ ||||++|+++|+++ ||+|++++|+..+...+.. .. +..|+.|. +++.++|+|+|
T Consensus 12 k~VlVTG~sGfIGs~l~~~Ll~~--G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~ 89 (342)
T d1y1pa1 12 SLVLVTGANGFVASHVVEQLLEH--GYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--cCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhh
Confidence 79999996 99999999999999 9999999998654433221 01 22345443 36789999999
Q ss_pred ccCCCCCCC--------hHHHHHHHHHH--h-CCCCcEEEEcCCccccCCCC----Ccc----------------CCCCC
Q 024494 149 CAPPSRSLD--------YPGDVRLAALS--W-NGEGSFLFTSSSAIYDCSDN----GAC----------------DEDSP 197 (267)
Q Consensus 149 ~a~~~~~~~--------~~~~~~~l~~~--~-~~v~r~V~~SS~~VYg~~~~----~~~----------------~E~~p 197 (267)
+++...... ++.++.+++.. . .++++|||+||..+++...+ ... .|+.+
T Consensus 90 ~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~ 169 (342)
T d1y1pa1 90 IASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDP 169 (342)
T ss_dssp CCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTST
T ss_pred hcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCC
Confidence 998765332 23445555432 2 36899999999875432211 112 33344
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc----C----eeEEeeCccccCC------c----hHHHHH-hCCcceecCCCccccHH
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYISL------C----YLVEKF-QGLPLLLKSPGIFSANW 258 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyGp~------~----~~l~~~-~g~~v~~~~~~~~~n~I 258 (267)
..| .++|+.+|..+|++++.+ + .+++||+.+|||. . .++..+ +|.......+.+..++|
T Consensus 170 ~~p--~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~v 247 (342)
T d1y1pa1 170 QKS--LWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYV 247 (342)
T ss_dssp THH--HHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEEEE
T ss_pred CCC--cCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCccceeee
Confidence 444 357999999999877654 2 6789999999985 1 233334 45544333344456677
Q ss_pred HHHHhh
Q 024494 259 HYICVK 264 (267)
Q Consensus 259 H~~~~~ 264 (267)
|..+++
T Consensus 248 ~v~Dva 253 (342)
T d1y1pa1 248 SAVDIG 253 (342)
T ss_dssp EHHHHH
T ss_pred eHHHHH
Confidence 766543
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.75 E-value=1.4e-17 Score=151.39 Aligned_cols=147 Identities=16% Similarity=0.147 Sum_probs=103.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC---CC------Cchh----hh----------ccC---eeeecCCc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---AD------HHDE----LI----------NMG---ITPSLKWT 137 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~---~~------~~~~----l~----------~~~---v~~d~~d~ 137 (267)
|||||||+ ||||++|+++|+++. ||+|+++|+- .. ..+. +. ... +..|+.|.
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~-~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDT-NHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHC-CCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhC-CCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 69999995 999999999998742 8999999751 10 0000 00 001 13355554
Q ss_pred c-------ccCCCCEEEEccCCCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCC-------C
Q 024494 138 E-------ATQKFPYVIFCAPPSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDN-------G 190 (267)
Q Consensus 138 ~-------~~~~~D~Vi~~a~~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~-------~ 190 (267)
+ ...++|+|||+|+...... +..++.+++. ...+++++++.|+..+|+.... .
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 2 3357899999999764321 1223334432 2357899999999999986532 3
Q ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCC
Q 024494 191 ACDEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISL 234 (267)
Q Consensus 191 ~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~ 234 (267)
++.|+.+..| .+.|+.+|+.+|++++++ + ++++|++++|||+
T Consensus 162 ~~~e~~~~~p--~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~ 209 (383)
T d1gy8a_ 162 PIDINAKKSP--ESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH 209 (383)
T ss_dssp CBCTTSCCBC--SSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred ccccccCCCC--CCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccC
Confidence 4677777777 479999999999999875 3 8999999999997
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=1.5e-17 Score=148.77 Aligned_cols=148 Identities=16% Similarity=0.112 Sum_probs=101.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC------c-h------hhhccC---eeeecCCcc------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH------H-D------ELINMG---ITPSLKWTE------AT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~------~-~------~l~~~~---v~~d~~d~~------~~ 140 (267)
.+||||||+ ||||++|+++|+++ ||+|+++++.... . . .+.... +..|+.|.+ ..
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~--g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~ 79 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEA--GYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK 79 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHT--TCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc
Confidence 378999996 99999999999999 9999999862111 1 1 111112 234566652 22
Q ss_pred CCCCEEEEccCCCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 141 QKFPYVIFCAPPSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
.++|+|+|+|+...... ++.+..+++. ...++++|||+||..+||.......+++.+.... .++|+
T Consensus 80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~-~~~Y~ 158 (346)
T d1ek6a_ 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGC-TNPYG 158 (346)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC-SSHHH
T ss_pred cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeecccccccccccccccc-CChHH
Confidence 46778999998764321 2233344432 3358999999999999998655444444333221 46899
Q ss_pred HHHHHHHHHHHHc-----C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-----G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-----~--~~IlR~~~iyGp~ 234 (267)
.+|..+|+.+.++ + .+++|++.+||+.
T Consensus 159 ~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~ 192 (346)
T d1ek6a_ 159 KSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAH 192 (346)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEeecceeccC
Confidence 9999999887753 2 8999999999984
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.73 E-value=1.3e-17 Score=151.92 Aligned_cols=175 Identities=13% Similarity=0.036 Sum_probs=112.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCC---------------CC-Cc-hhh------hccCe---eeecCCc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMT---------------AD-HH-DEL------INMGI---TPSLKWT 137 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~---------------~~-~~-~~l------~~~~v---~~d~~d~ 137 (267)
|||||||+ ||||++|+++|+++ ||+|+++|.- +. .. ..+ ...++ ..|+.|.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~--g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~ 79 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKK--NYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 79 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--cCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCH
Confidence 89999996 99999999999999 9999999720 00 00 000 11123 3456664
Q ss_pred c----ccC--CCCEEEEccCCCCCC----C----------hHHHHHHHHHHh--CC-CCcEEEEcCCccccCCCCC----
Q 024494 138 E----ATQ--KFPYVIFCAPPSRSL----D----------YPGDVRLAALSW--NG-EGSFLFTSSSAIYDCSDNG---- 190 (267)
Q Consensus 138 ~----~~~--~~D~Vi~~a~~~~~~----~----------~~~~~~~l~~~~--~~-v~r~V~~SS~~VYg~~~~~---- 190 (267)
+ .+. ++|+|||+|+..... + ++.++.+++... .+ .+++++.||..+|+.....
T Consensus 80 ~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~ 159 (393)
T d1i24a_ 80 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEG 159 (393)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSS
T ss_pred HHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccc
Confidence 2 222 679999999865321 1 233445554322 24 4578888888898754311
Q ss_pred --cc-------CCCCCCCCCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc--------------------
Q 024494 191 --AC-------DEDSPVVPIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC-------------------- 235 (267)
Q Consensus 191 --~~-------~E~~p~~p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~-------------------- 235 (267)
.. +|..|..| .+.|+.+|+.+|.++..+ + ++++||+++|||+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~p--~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 160 YITITHNGRTDTLPYPKQA--SSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp EEEEEETTEEEEEECCCCC--CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred ccccccccccccccccccc--ccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccc
Confidence 01 12224445 468999999999988654 3 89999999999861
Q ss_pred ----hHHHHH-hCCccee-cCCCccccHHHHHHh
Q 024494 236 ----YLVEKF-QGLPLLL-KSPGIFSANWHYICV 263 (267)
Q Consensus 236 ----~~l~~~-~g~~v~~-~~~~~~~n~IH~~~~ 263 (267)
.++..+ .|+++.+ +++.+..+++|..++
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~ 271 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDT 271 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred cchhhhhHHhhcCCeeEEeeecccccccccccch
Confidence 122233 4777766 445577788886654
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.71 E-value=2.1e-17 Score=143.10 Aligned_cols=163 Identities=11% Similarity=0.097 Sum_probs=109.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCcc----cc--CCCCEEEEccCCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTE----AT--QKFPYVIFCAPPSRSL- 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~----~~--~~~D~Vi~~a~~~~~~- 156 (267)
|||||||+ ||||++|+++|.++ |+ +++++++... ...|+.|.+ .+ .++|+|||||+.....
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~--g~-~v~~~~~~~~--------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~~ 69 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPV--GN-LIALDVHSKE--------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVDK 69 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTT--SE-EEEECTTCSS--------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC--CC-EEEEECCCcc--------ccCcCCCHHHHHHHHHHcCCCEEEEecccccccc
Confidence 78999996 99999999999988 76 4455554322 223444431 22 3679999999865421
Q ss_pred ---C-------hHHHHHHHHHHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ee
Q 024494 157 ---D-------YPGDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (267)
Q Consensus 157 ---~-------~~~~~~~l~~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~ 223 (267)
. +.....+++.+. ....++++.||..+|+...+.+.+|+++..|. +.|++.|..+|+.++.+. ..
T Consensus 70 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~--~~y~~~k~~~e~~~~~~~~~~~ 147 (298)
T d1n2sa_ 70 AESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPL--NVYGKTKLAGEKALQDNCPKHL 147 (298)
T ss_dssp HTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCS--SHHHHHHHHHHHHHHHHCSSEE
T ss_pred cccCccccccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCC--chHhhhhhhhhhhHHhhhcccc
Confidence 1 122233443332 34578999999999988777889999998884 689999999999998765 66
Q ss_pred EEeeCccc-cCCc----hHHHHHh-CCcceecCCCccccHHHHH
Q 024494 224 VLRLAGLY-ISLC----YLVEKFQ-GLPLLLKSPGIFSANWHYI 261 (267)
Q Consensus 224 IlR~~~iy-Gp~~----~~l~~~~-g~~v~~~~~~~~~n~IH~~ 261 (267)
++|++..| |++. .+...+. +.++.+. +.++.+++|..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 190 (298)
T d1n2sa_ 148 IFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI-NDQYGAPTGAE 190 (298)
T ss_dssp EEEECSEECSSSCCHHHHHHHHHHHCSEEEEE-CSCEECCEEHH
T ss_pred cccccceeeccCCccchhhhhhhcccceeecc-cceeecccccc
Confidence 66666655 4442 2334443 5555544 34566666643
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.71 E-value=2.3e-17 Score=138.20 Aligned_cols=157 Identities=14% Similarity=0.074 Sum_probs=102.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeeeecCC-----ccccCCCCEEEEccCCCCC-
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITPSLKW-----TEATQKFPYVIFCAPPSRS- 155 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~d~~d-----~~~~~~~D~Vi~~a~~~~~- 155 (267)
+||||+|+ ||||++|+++|+++ |+ +|++++|++..... .+..+..| ......+|+||+|++....
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~--~~~~~v~~~~r~~~~~~~----~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~~~~ 76 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSE--PTLAKVIAPARKALAEHP----RLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKE 76 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHC--TTCCEEECCBSSCCCCCT----TEECCBSCHHHHGGGCCSCCSEEEECCCCCHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhC--CCeEEEEEEeCCchhhcc----cccccccchhhhhhccccchheeeeeeeeeccc
Confidence 79999996 99999999999999 87 67888876543211 12222222 1234578999999986521
Q ss_pred -CC---h----HHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC---e
Q 024494 156 -LD---Y----PGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG---G 222 (267)
Q Consensus 156 -~~---~----~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~---~ 222 (267)
.. + .....+++. ...++++||++|+.++|+.. .+.|+++|..+|+.+++.+ +
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~---------------~~~y~~~K~~~E~~l~~~~~~~~ 141 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS---------------SIFYNRVKGELEQALQEQGWPQL 141 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTC---------------SSHHHHHHHHHHHHHTTSCCSEE
T ss_pred cccccccccchhhhhhhccccccccccccccccccccccccc---------------ccchhHHHHHHhhhccccccccc
Confidence 11 1 122233332 34589999999999887532 2479999999999998875 8
Q ss_pred eEEeeCccccCCch--HHHHHhCCcceecCCCccccHHHHHHhh
Q 024494 223 CVLRLAGLYISLCY--LVEKFQGLPLLLKSPGIFSANWHYICVK 264 (267)
Q Consensus 223 ~IlR~~~iyGp~~~--~l~~~~g~~v~~~~~~~~~n~IH~~~~~ 264 (267)
+|+||+.+||+... +...+ ..++....++ ..+.||..++|
T Consensus 142 ~I~Rp~~v~G~~~~~~~~~~~-~~~~~~~~~~-~~~~i~v~DvA 183 (212)
T d2a35a1 142 TIARPSLLFGPREEFRLAEIL-AAPIARILPG-KYHGIEACDLA 183 (212)
T ss_dssp EEEECCSEESTTSCEEGGGGT-TCCCC----C-HHHHHHHHHHH
T ss_pred eeeCCcceeCCcccccHHHHH-HHHHhhccCC-CCcEEEHHHHH
Confidence 99999999999842 12222 2222111122 34668876654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.69 E-value=1.2e-16 Score=142.68 Aligned_cols=175 Identities=15% Similarity=0.157 Sum_probs=116.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCee---eecCCcc----c--cCCCCEEEEc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGIT---PSLKWTE----A--TQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v~---~d~~d~~----~--~~~~D~Vi~~ 149 (267)
|||||||+ ||||++|+++|+++ ||+|++++|+......+.. .+++ .|+.|++ . ...+|+|+|+
T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~--g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTM--GATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 89999995 99999999999999 9999999998765443211 1333 3555542 2 2467999999
Q ss_pred cCCCCCCC-----------hHHHHHHHHHH---hCCCCcEEEEcCCccccCCC-CCccCCCCCCCCCCCCHHHHHHHHHH
Q 024494 150 APPSRSLD-----------YPGDVRLAALS---WNGEGSFLFTSSSAIYDCSD-NGACDEDSPVVPIGRSPRTDVLLKAE 214 (267)
Q Consensus 150 a~~~~~~~-----------~~~~~~~l~~~---~~~v~r~V~~SS~~VYg~~~-~~~~~E~~p~~p~~~~~y~~~k~~aE 214 (267)
|+...... ++.++.+++.+ ......+++.|+..+|.... ..+.+|+.+..|. ++|+..|...|
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~--~~y~~~k~~~e 164 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY--DPYSNSKGCAE 164 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS--SHHHHHHHHHH
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCC--Cccccccccch
Confidence 98754321 12234444432 22445566666555554433 3467777777774 68999999998
Q ss_pred HHHHHc-------------C--eeEEeeCccccCCc----h----HHHHHh-CCcceecCCCccccHHHHHHh
Q 024494 215 KVILEF-------------G--GCVLRLAGLYISLC----Y----LVEKFQ-GLPLLLKSPGIFSANWHYICV 263 (267)
Q Consensus 215 ~~l~~~-------------~--~~IlR~~~iyGp~~----~----~l~~~~-g~~v~~~~~~~~~n~IH~~~~ 263 (267)
..+..+ + ++++||+++|||+. . +++.+. +.++....+.+..+++|..++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~ 237 (356)
T d1rkxa_ 165 LVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEP 237 (356)
T ss_dssp HHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHH
T ss_pred hhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccc
Confidence 776532 2 78999999999983 2 233444 556655566667777775443
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=6e-16 Score=134.15 Aligned_cols=174 Identities=14% Similarity=0.079 Sum_probs=105.1
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCC-eEEEEeCCCC--CchhhhccCeee--ecCC-------ccccCCCCEEEEccCCC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGC-QIYGQTMTAD--HHDELINMGITP--SLKW-------TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~-~V~~l~R~~~--~~~~l~~~~v~~--d~~d-------~~~~~~~D~Vi~~a~~~ 153 (267)
|||||+ ||||++|+++|+++ |+ +|+++++-.. +...+.+..+.. +..+ ......+++|+|+|+..
T Consensus 2 ILITGgsGfIGs~lv~~L~~~--g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~ 79 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDK--GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS 79 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTT--TCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred EEEecCccHHHHHHHHHHHhC--CCCeEEEEECCCCcchhhcccccchhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence 899985 99999999999999 95 8999975322 222222222211 1111 12457889999999855
Q ss_pred CCCC---------hHHHHHHHHHHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--
Q 024494 154 RSLD---------YPGDVRLAALSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG-- 221 (267)
Q Consensus 154 ~~~~---------~~~~~~~l~~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~-- 221 (267)
.... ......+++... ....++|+.||..+|+.......+|+.+..| .+.|+.+|..+|..++.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~--~~~Y~~~K~~~e~~~~~~~~~ 157 (307)
T d1eq2a_ 80 STTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKP--LNVYGYSKFLFDEYVRQILPE 157 (307)
T ss_dssp CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCC--SSHHHHHHHHHHHHHHHHGGG
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccchhhhhccccccc
Confidence 4321 122233332211 1223588888888887665556666666555 4689999999999988752
Q ss_pred ----eeEEeeCccccCCc-----------hHHHHHh-CCccee--cCCCccccHHHHHHhh
Q 024494 222 ----GCVLRLAGLYISLC-----------YLVEKFQ-GLPLLL--KSPGIFSANWHYICVK 264 (267)
Q Consensus 222 ----~~IlR~~~iyGp~~-----------~~l~~~~-g~~v~~--~~~~~~~n~IH~~~~~ 264 (267)
++++|++.+|||+. .+.+.+. |+...+ +++.+...++|..+++
T Consensus 158 ~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~ 218 (307)
T d1eq2a_ 158 ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA 218 (307)
T ss_dssp CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHH
T ss_pred cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHH
Confidence 89999999999972 1234454 544433 3333556777755443
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.60 E-value=1.7e-15 Score=131.52 Aligned_cols=170 Identities=13% Similarity=-0.042 Sum_probs=112.9
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--------hhhccCeee---ecCCc----cccCCCCEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--------ELINMGITP---SLKWT----EATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--------~l~~~~v~~---d~~d~----~~~~~~D~Vi 147 (267)
++||||||+ |+||++|+++|+++ ||+|++++|++.... .+...+++. |+.|. ..+.++++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~--G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~ 80 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISL--GHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVI 80 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhh
Confidence 578999996 99999999999999 999999999765431 112234443 44443 3678999999
Q ss_pred EccCCCCCCChHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--ee
Q 024494 148 FCAPPSRSLDYPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GC 223 (267)
Q Consensus 148 ~~a~~~~~~~~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~ 223 (267)
++++............+++. +..+..++++.||.++++.. +..+..| ...|...+..+|+...+.+ ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 152 (312)
T d1qyda_ 81 SALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDI------MEHALQP--GSITFIDKRKVRRAIEAASIPYT 152 (312)
T ss_dssp ECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTS------CCCCCSS--TTHHHHHHHHHHHHHHHTTCCBC
T ss_pred hhhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCC------cccccch--hhhhhHHHHHHHHhhcccccceE
Confidence 99986543332222333322 33467888899987776543 2333334 3467888888999888877 99
Q ss_pred EEeeCccccCCch-----HHHHH-hCCcce-ecCCCccccHHHHHHh
Q 024494 224 VLRLAGLYISLCY-----LVEKF-QGLPLL-LKSPGIFSANWHYICV 263 (267)
Q Consensus 224 IlR~~~iyGp~~~-----~l~~~-~g~~v~-~~~~~~~~n~IH~~~~ 263 (267)
++|++.+||+... +.... .+.++. ...+.++.++||..++
T Consensus 153 i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv 199 (312)
T d1qyda_ 153 YVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDV 199 (312)
T ss_dssp EEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHH
T ss_pred EeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHH
Confidence 9999999998621 11222 233333 3344577888886654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.59 E-value=2.9e-15 Score=131.88 Aligned_cols=174 Identities=16% Similarity=0.104 Sum_probs=108.4
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC--Cchhh---hc-cCe---eeecCCcc----cc--CCCCEEEEc
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD--HHDEL---IN-MGI---TPSLKWTE----AT--QKFPYVIFC 149 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~--~~~~l---~~-~~v---~~d~~d~~----~~--~~~D~Vi~~ 149 (267)
||||||+ ||||++|+++|+++ ||+|+++++-.. ....+ .. .++ ..|+.|.+ ++ .++|+|||+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~--g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~ 79 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQ--GIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 79 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHHC--cCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEee
Confidence 7999996 99999999999999 999999985322 11111 11 122 34666542 22 357999999
Q ss_pred cCCCCCCC-----------hHHHHHHHHH--HhCCCCcEEEEcCCccc-cCCCCC----------------ccCCCCCCC
Q 024494 150 APPSRSLD-----------YPGDVRLAAL--SWNGEGSFLFTSSSAIY-DCSDNG----------------ACDEDSPVV 199 (267)
Q Consensus 150 a~~~~~~~-----------~~~~~~~l~~--~~~~v~r~V~~SS~~VY-g~~~~~----------------~~~E~~p~~ 199 (267)
|+...... ++.++.+++. ...+++++|+.||+..+ +..... ...+.++..
T Consensus 80 aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (338)
T d1orra_ 80 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 159 (338)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccc
Confidence 98764321 3445566653 23467666666665544 433211 123344445
Q ss_pred CCCCCHHHHHHHHHHHHHHHc----C--eeEEeeCccccCCc----------hHHHHH------hCCcceecC-CCcccc
Q 024494 200 PIGRSPRTDVLLKAEKVILEF----G--GCVLRLAGLYISLC----------YLVEKF------QGLPLLLKS-PGIFSA 256 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~----~--~~IlR~~~iyGp~~----------~~l~~~------~g~~v~~~~-~~~~~n 256 (267)
| .+.|+..|...|.++... + .+++|++.+||+.. .++..+ .++++.+.+ +.+..+
T Consensus 160 ~--~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~ 237 (338)
T d1orra_ 160 F--HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRD 237 (338)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEE
T ss_pred c--ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEe
Confidence 5 368999999999886653 3 78999999997751 223222 155665544 446777
Q ss_pred HHHHHHh
Q 024494 257 NWHYICV 263 (267)
Q Consensus 257 ~IH~~~~ 263 (267)
++|..++
T Consensus 238 ~~~v~D~ 244 (338)
T d1orra_ 238 VLHAEDM 244 (338)
T ss_dssp CEEHHHH
T ss_pred eecccch
Confidence 7776543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.55 E-value=1.9e-15 Score=125.71 Aligned_cols=145 Identities=14% Similarity=0.104 Sum_probs=96.6
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCe--EEEEeCCCCCchhhhccCe---eeecCCc----cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQ--IYGQTMTADHHDELINMGI---TPSLKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~--V~~l~R~~~~~~~l~~~~v---~~d~~d~----~~~~~~D~Vi~~a~~ 152 (267)
.|++|||||+ |+||++|+++|+++ ||+ |+.++|++++...+. .++ ..|..+. +.+.++|+|||+++.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~--g~~v~v~~~~R~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEG--SDKFVAKGLVRSAQGKEKIG-GEADVFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHT--TTTCEEEEEESCHHHHHHTT-CCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHC--CCcEEEEEEcCCHHHHHhcc-CCcEEEEeeeccccccccccccceeeEEEEee
Confidence 3799999995 99999999999999 865 677788876654433 233 3344443 367899999999975
Q ss_pred CCCC-----------------C-------hHHHHHHHHH--HhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 153 SRSL-----------------D-------YPGDVRLAAL--SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 153 ~~~~-----------------~-------~~~~~~~l~~--~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
.... . ...+.++++. .....+.+.+.|+...+.... +........|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--------~~~~~~~~~~ 150 (252)
T d2q46a1 79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDH--------PLNKLGNGNI 150 (252)
T ss_dssp CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTC--------GGGGGGGCCH
T ss_pred ccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCc--------ccccccccch
Confidence 4210 0 1123344432 223678899998877765322 1111112346
Q ss_pred HHHHHHHHHHHHHcC--eeEEeeCccccCCchHH
Q 024494 207 TDVLLKAEKVILEFG--GCVLRLAGLYISLCYLV 238 (267)
Q Consensus 207 ~~~k~~aE~~l~~~~--~~IlR~~~iyGp~~~~l 238 (267)
...+...|.+..+.+ ++++||+++||+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~ 184 (252)
T d2q46a1 151 LVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 184 (252)
T ss_dssp HHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSS
T ss_pred hhhhhhhhhhhhcccccceeecceEEECCCcchh
Confidence 667777788777777 99999999999985433
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.52 E-value=1.1e-14 Score=125.08 Aligned_cols=167 Identities=15% Similarity=0.035 Sum_probs=107.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh---------hccCeee---ecCCc----cccCCCCEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL---------INMGITP---SLKWT----EATQKFPYV 146 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l---------~~~~v~~---d~~d~----~~~~~~D~V 146 (267)
++||||||+ |+||++|+++|+++ ||+|++++|++...... ...+++. |+.+. ..+.+++.|
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~--G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDL--GHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHT--TCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceee
Confidence 489999996 99999999999999 99999999976543221 1223433 33333 356789999
Q ss_pred EEccCCCCCCChHHHHHHHHHHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeE
Q 024494 147 IFCAPPSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCV 224 (267)
Q Consensus 147 i~~a~~~~~~~~~~~~~~l~~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~I 224 (267)
+|+++..........+. . ....+++++++.|+.+.+... ..+..+ ...+...+...|..+.+.+ ++|
T Consensus 81 i~~~~~~~~~~~~~~~~-a-~~~~~~~~~~~~s~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i 149 (307)
T d1qyca_ 81 ISTVGSLQIESQVNIIK-A-IKEVGTVKRFFPSEFGNDVDN-------VHAVEP--AKSVFEVKAKVRRAIEAEGIPYTY 149 (307)
T ss_dssp EECCCGGGSGGGHHHHH-H-HHHHCCCSEEECSCCSSCTTS-------CCCCTT--HHHHHHHHHHHHHHHHHHTCCBEE
T ss_pred eecccccccchhhHHHH-H-HHHhccccceeeecccccccc-------cccccc--ccccccccccccchhhccCCCcee
Confidence 99987654322111111 1 223478889998886554321 111212 1345667788888888876 999
Q ss_pred EeeCccccCCchHH----HH-HhCCcce-ecCCCccccHHHHHHh
Q 024494 225 LRLAGLYISLCYLV----EK-FQGLPLL-LKSPGIFSANWHYICV 263 (267)
Q Consensus 225 lR~~~iyGp~~~~l----~~-~~g~~v~-~~~~~~~~n~IH~~~~ 263 (267)
+|++.+||+....+ .. .++.... +..+.+..++||.-++
T Consensus 150 ~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 194 (307)
T d1qyca_ 150 VSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDI 194 (307)
T ss_dssp EECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHH
T ss_pred cccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHH
Confidence 99999999873222 12 2344343 3445677888886654
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.21 E-value=9.8e-11 Score=103.97 Aligned_cols=137 Identities=13% Similarity=0.022 Sum_probs=94.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh--hhc-cCeee---ecCCc-----cccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE--LIN-MGITP---SLKWT-----EATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~--l~~-~~v~~---d~~d~-----~~~~~~D~Vi~~a~ 151 (267)
.++|+|||+ |+||++|+++|+++ ||+|++++|++.+... +.. .+++. |+.|. .++.++|++++...
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~--G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAV--GHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHT--TCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCChHHHHHHHHHHHhC--CCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 478999996 99999999999999 9999999998776432 221 34544 44443 25678899887765
Q ss_pred CCCCCChHHHHHHHHHH--hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcC--eeEEee
Q 024494 152 PSRSLDYPGDVRLAALS--WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEFG--GCVLRL 227 (267)
Q Consensus 152 ~~~~~~~~~~~~~l~~~--~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~~--~~IlR~ 227 (267)
... .......++++.+ .++++++++.||...+.... ..+. .+|...|...|+++.+.. ++++|+
T Consensus 81 ~~~-~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~------~~~~-----~~~~~~k~~~~~~~~~~~~~~~~vr~ 148 (350)
T d1xgka_ 81 SQA-GDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG------PWPA-----VPMWAPKFTVENYVRQLGLPSTFVYA 148 (350)
T ss_dssp STT-SCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS------SCCC-----CTTTHHHHHHHHHHHTSSSCEEEEEE
T ss_pred ccc-chhhhhhhHHHHHHHHhCCCceEEEeeccccccCC------cccc-----hhhhhhHHHHHHHHHhhccCceeeee
Confidence 433 2334444555432 35888999999876544321 1111 234467888899888876 999999
Q ss_pred CccccCC
Q 024494 228 AGLYISL 234 (267)
Q Consensus 228 ~~iyGp~ 234 (267)
+.+++..
T Consensus 149 ~~~~~~~ 155 (350)
T d1xgka_ 149 GIYNNNF 155 (350)
T ss_dssp CEEGGGC
T ss_pred ceeeccc
Confidence 9988764
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.84 E-value=2e-08 Score=85.16 Aligned_cols=136 Identities=12% Similarity=0.078 Sum_probs=91.5
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----------cccCCCCEEEEc
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------EATQKFPYVIFC 149 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----------~~~~~~D~Vi~~ 149 (267)
.+.+++||||+ +-||++++++|.++ |++|++.+|+.+...++ ..+..|+.|+ +...+.|++||+
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~--~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn 80 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAAD--GHKVAVTHRGSGAPKGL--FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 80 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSSCCCTTS--EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcchhcCc--eEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence 34588999996 89999999999999 99999999988776544 2456677664 234689999999
Q ss_pred cCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 150 APPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 150 a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
|+...... +.+.+ +.++ +...+.+++|++||...+... |. ...|+.
T Consensus 81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~------------~~-~~~Y~a 147 (237)
T d1uzma1 81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI------------GN-QANYAA 147 (237)
T ss_dssp CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------C-CHHHHH
T ss_pred ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC------------cc-cHHHHH
Confidence 99654321 11111 1111 123456799999997754321 11 247999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+|.+.+.+.+.. + +..+.|+.+.-+.
T Consensus 148 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~ 182 (237)
T d1uzma1 148 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDM 182 (237)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH
T ss_pred HHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChh
Confidence 999888765543 2 6678999887653
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.74 E-value=5.4e-08 Score=82.66 Aligned_cols=134 Identities=13% Similarity=0.095 Sum_probs=91.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cC---eeeecCCc-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MG---ITPSLKWT-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~---v~~d~~d~-------~~~~~~D~Vi~~a~ 151 (267)
+++||||+ +-||++++++|.++ |++|+..+|++++.+++.+ .+ +..|+.|+ +.+.+.|++||+|+
T Consensus 8 K~~lITGas~GIG~aia~~la~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg 85 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHAT--GARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence 78999996 89999999999999 9999999998776654432 12 33466554 35678999999998
Q ss_pred CCCCCC--------hHHH-----------HHHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 152 PSRSLD--------YPGD-----------VRLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 152 ~~~~~~--------~~~~-----------~~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
...... +.+. .+.++ .+..+..++|++||...+... |. ...|+.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~------------~~-~~~Y~as 152 (244)
T d1pr9a_ 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------TN-HSVYCST 152 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TT-BHHHHHH
T ss_pred cccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc------------cc-hhhhhhh
Confidence 754321 1111 11111 122356799999997754321 11 2479999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|.+.+.+.+.. + +..+.|+.+.-+
T Consensus 153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~ 185 (244)
T d1pr9a_ 153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTS 185 (244)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSH
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcCh
Confidence 98888765543 2 677899988655
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.71 E-value=7.3e-08 Score=81.76 Aligned_cols=134 Identities=13% Similarity=0.040 Sum_probs=90.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--cC---eeeecCCc-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--MG---ITPSLKWT-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--~~---v~~d~~d~-------~~~~~~D~Vi~~a~ 151 (267)
|++||||+ +-||++++++|.++ |++|+..+|++++..++.+ .+ +..|+.|+ +.+.+.|++||+|+
T Consensus 6 K~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg 83 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHAS--GAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 83 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence 78999996 88999999999999 9999999998776544432 12 33456554 34578999999999
Q ss_pred CCCCCC--------hHHHH-----------HHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHH
Q 024494 152 PSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDV 209 (267)
Q Consensus 152 ~~~~~~--------~~~~~-----------~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~ 209 (267)
...... +...+ +.+. .......++|.+||...+... |. ...|+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------~~-~~~Y~as 150 (242)
T d1cyda_ 84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------PN-LITYSST 150 (242)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------TT-BHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC------------Cc-cccccch
Confidence 654321 11111 1111 122345689999998654321 11 2479999
Q ss_pred HHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 210 LLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 210 k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|.+.+.+.+.. + +..+-|+.+-.+
T Consensus 151 Kaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~ 183 (242)
T d1cyda_ 151 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTD 183 (242)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTH
T ss_pred HHHHHHHHHHHHHHhCccCeecccCCCCCccCH
Confidence 99888776543 2 677889888655
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.69 E-value=8.1e-08 Score=81.70 Aligned_cols=138 Identities=12% Similarity=0.030 Sum_probs=92.1
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCc-----------cccCCC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT-----------EATQKF 143 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~-----------~~~~~~ 143 (267)
+.-+.+||||+ +-||++++++|+++ |++|+..+|++++.+++.+ ..+..|+.|+ +.....
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAE--GAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 34478999996 88999999999999 9999999998876554432 1234566654 234689
Q ss_pred CEEEEccCCCCCC---C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~---~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+|+..... + |.+.+ +.++ +...+..++|++||...+... |.
T Consensus 82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~~- 148 (244)
T d1nffa_ 82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT------------VA- 148 (244)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TT-
T ss_pred eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc------------cc-
Confidence 9999999965432 1 11111 1111 122345799999998765321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...+.+.+.. + +..+-|+.+.-+.
T Consensus 149 ~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~ 189 (244)
T d1nffa_ 149 CHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 189 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGG
T ss_pred ccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChh
Confidence 247999999888775543 3 6778888886654
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.68 E-value=4.7e-08 Score=83.03 Aligned_cols=134 Identities=11% Similarity=0.076 Sum_probs=90.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc------cCeeeecCCc-----------cccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN------MGITPSLKWT-----------EATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~------~~v~~d~~d~-----------~~~~~~D~V 146 (267)
+.++|||+ +-||++++++|.++ |++|+..+|+++..+++.+ ..+..|+.|+ +...+.|++
T Consensus 5 K~alITGas~GIG~a~a~~l~~~--G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAAR--GAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 67899996 89999999999999 9999999998776654432 1234566553 245689999
Q ss_pred EEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+...... +.+.+ +.++ +...+..++|++||...+-.. |. ...
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~------------~~-~~~ 149 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN------------GG-QAN 149 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC------------TT-CHH
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC------------CC-CHH
Confidence 99998654321 11111 1111 122356799999998765321 11 347
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|..+|.+.+.+.+.. + +..+.|+.+--+
T Consensus 150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~ 186 (243)
T d1q7ba_ 150 YAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETD 186 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEech
Confidence 999999888775543 3 677999988654
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.67 E-value=1.1e-07 Score=80.65 Aligned_cols=134 Identities=16% Similarity=0.150 Sum_probs=88.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c---CeeeecCCc-----------cccCCCCEEEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M---GITPSLKWT-----------EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~---~v~~d~~d~-----------~~~~~~D~Vi~ 148 (267)
+++||||+ +-||++++++|.++ |++|+.++|++++.++..+ . .+.+|+.|+ +...+.|++||
T Consensus 6 K~~lITGas~GIG~aia~~l~~~--G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn 83 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKE--GARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence 77999996 78999999999999 9999999998776554432 2 344566654 23468999999
Q ss_pred ccCCCCCCC--------hHHHHH-------H----HH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSLD--------YPGDVR-------L----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~~--------~~~~~~-------~----l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+|+...... |.+.+. . ++ +...+...++.+||.+..+.+ . ...|+
T Consensus 84 nAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~~~-------------~-~~~Y~ 149 (242)
T d1ulsa_ 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLGNL-------------G-QANYA 149 (242)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGCCT-------------T-CHHHH
T ss_pred CCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccCCC-------------C-CcchH
Confidence 999754321 211111 1 11 112244567777775433321 1 24799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+|.+.+.+.+.. + +..+.|+.+--+.
T Consensus 150 asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~ 185 (242)
T d1ulsa_ 150 ASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185 (242)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChh
Confidence 9999888765543 2 6778999987664
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.66 E-value=1.4e-07 Score=79.41 Aligned_cols=136 Identities=11% Similarity=0.070 Sum_probs=89.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----cccCCCCEEEEccCCCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----EATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----~~~~~~D~Vi~~a~~~~~~~ 157 (267)
-|++||||+ +-||++++++|.++ |++|+..+|+++..++.....+.+|+.+. +.+.+.|++||+|+......
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~--Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~~~ 81 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQE--GAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKAGF 81 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCCBC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCCcc
Confidence 378999996 88999999999999 99999999987655433222234455443 35678999999998654321
Q ss_pred --------hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHHHHHHHH
Q 024494 158 --------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVLLKAEKV 216 (267)
Q Consensus 158 --------~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~ 216 (267)
+.+.+. .++ +...+..++|.+||...+... +. ...|..+|.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~------------~~-~~~Y~asKaal~~l 148 (234)
T d1o5ia_ 82 FDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI------------EN-LYTSNSARMALTGF 148 (234)
T ss_dssp GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TT-BHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc------------cc-cccchhHHHHHHHH
Confidence 111111 111 122356789999987654321 11 24788888888766
Q ss_pred HHHc-------C--eeEEeeCccccCC
Q 024494 217 ILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 217 l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.. + +-.+-|+.+-.+.
T Consensus 149 tk~lA~ela~~gIrVN~I~PG~v~T~~ 175 (234)
T d1o5ia_ 149 LKTLSFEVAPYGITVNCVAPGWTETER 175 (234)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTT
T ss_pred HHHHHHHhcccCeEEeecccCccchhh
Confidence 5432 3 6678999887775
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.64 E-value=1.8e-07 Score=79.30 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=91.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCc----------cccCCCCEEEEccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT----------EATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~----------~~~~~~D~Vi~~a~ 151 (267)
-+++||||+ +-||+++++.|+++ |++|++.+|++++.+++.+ .++..+..|. +...+.|++||+++
T Consensus 6 gK~alITGas~GIG~aia~~la~~--G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 6 GKVIILTAAAQGIGQAAALAFARE--GAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 377999996 99999999999999 9999999999876665543 3455544332 24568999999999
Q ss_pred CCCCCC--------hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 152 PSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 152 ~~~~~~--------~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
...... +...+. .++ +...+..++|++||...- ..+... ...|+.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~----------~~~~~~--~~~Y~~sK 151 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----------VKGVVN--RCVYSTTK 151 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----------TBCCTT--BHHHHHHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhc----------cCCccc--hhHHHHHH
Confidence 665421 111111 111 122356789999886420 001111 34799999
Q ss_pred HHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 211 LKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 211 ~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.+.|.+.+.. + +..+.|+.+-.+.
T Consensus 152 aal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~ 184 (245)
T d2ag5a1 152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPS 184 (245)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHH
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeceeechh
Confidence 9998876653 2 6778999887654
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.62 E-value=1.5e-07 Score=80.16 Aligned_cols=134 Identities=11% Similarity=0.033 Sum_probs=87.6
Q ss_pred Ce-EEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccCC
Q 024494 85 ND-LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~-ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~ 142 (267)
|| +||||+ +-||++++++|.++ |++|+..+|++++.+++ ...+ +.+|+.|+ +.+.+
T Consensus 1 KKValITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 78 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKD--GFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 78 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 35 589996 88999999999999 99999999987765433 2222 34466554 24578
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.|++||+||...... |.+.+ +.++ .......++|++||...+... |
T Consensus 79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~------------~ 146 (255)
T d1gega_ 79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------P 146 (255)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------T
T ss_pred ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC------------c
Confidence 999999999654321 11111 1111 122234679999987754221 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
. ...|+.+|...+.+.+.. + +..+-|+.+--+
T Consensus 147 ~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 187 (255)
T d1gega_ 147 E-LAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTP 187 (255)
T ss_dssp T-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSH
T ss_pred c-cccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccCh
Confidence 1 247999999888765543 3 677889988544
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.61 E-value=3.1e-07 Score=78.08 Aligned_cols=135 Identities=10% Similarity=0.042 Sum_probs=90.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc---CeeeecCCc-----------cccCCCCEEEE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT-----------EATQKFPYVIF 148 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~---~v~~d~~d~-----------~~~~~~D~Vi~ 148 (267)
-+.+||||+ +-||++++++|.++ |++|+..+|+++..+..... .+.+|+.|. +.+.+.|++||
T Consensus 5 GK~alITGas~GIG~aia~~la~~--G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 5 GKGVLVTGGARGIGRAIAQAFARE--GALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 478999996 89999999999999 99999999987654322222 245566654 24568999999
Q ss_pred ccCCCCCCC--------hHHHHH-------HHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHH
Q 024494 149 CAPPSRSLD--------YPGDVR-------LAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRT 207 (267)
Q Consensus 149 ~a~~~~~~~--------~~~~~~-------~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~ 207 (267)
+|+...... |.+.+. .+. +...+..++|++||...+... |. ...|+
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~------------~~-~~~Y~ 149 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE------------QE-NAAYN 149 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC------------TT-BHHHH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc------------cc-cchhH
Confidence 999654321 111111 111 122356799999998765321 11 24799
Q ss_pred HHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 208 DVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 208 ~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.+|...+.+.+.. + +..+-|+.+--+
T Consensus 150 asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 184 (248)
T d2d1ya1 150 ASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 184 (248)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCc
Confidence 9999888765543 3 677889887654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.61 E-value=1.7e-07 Score=80.09 Aligned_cols=134 Identities=14% Similarity=0.027 Sum_probs=89.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCc-----------cccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWT-----------EATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~-----------~~~~~~D~V 146 (267)
+++||||+ +-||++++++|.++ |++|+..+|+.++..++.+ . .+..|+.|+ +...+.|++
T Consensus 6 K~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAA--GARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 78999996 88999999999999 9999999998776544322 1 234466554 234689999
Q ss_pred EEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 147 IFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
||+|+...... +.+.+ +.++ +...+..++|++||...+... |. ...
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~------------~~-~~~ 150 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL------------AL-TSS 150 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------TT-CHH
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc------------cc-hhh
Confidence 99999754321 11111 1111 122356799999998754321 11 347
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|+.+|.+.+.+.+.. + +..+-|+.+.-+
T Consensus 151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~ 187 (254)
T d1hdca_ 151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCc
Confidence 999999888765543 2 677888888544
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.60 E-value=2.3e-07 Score=79.02 Aligned_cols=136 Identities=17% Similarity=0.147 Sum_probs=89.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-----ccC-----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMG-----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-----~~~-----v~~d~~d~-----------~~~~~ 142 (267)
+.+||||+ +-||++++++|.++ |++|+..+|+.++..+.. ..+ +..|+.|+ +.+.+
T Consensus 6 K~~lITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEA--GCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 78999996 89999999999999 999999999876543321 112 33466554 23568
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|++||+||...... |.+.+ +.++ +...+.+++|++||....... .+
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~-----------~~- 151 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT-----------MP- 151 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC-----------SS-
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc-----------Cc-
Confidence 999999999654321 11111 1111 122356799999986542110 01
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+...|+.+|.+.+.+.+.. + +..+-|+.+-.+.
T Consensus 152 ~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~ 193 (251)
T d1vl8a_ 152 NISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 193 (251)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTT
T ss_pred cccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHH
Confidence 1247999998888765543 3 6778999987665
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.58 E-value=2.6e-07 Score=78.81 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=90.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCc-----------cccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWT-----------EATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~-----------~~~~~~D~V 146 (267)
+++||||+ +-||++++++|.++ |++|+..+|+.++.+++.+ . .+..|+.|+ +...+.|++
T Consensus 6 K~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVRE--GARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHT--TEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 67899996 89999999999999 9999999998766544322 1 234466654 234689999
Q ss_pred EEccCCCCCCC--------hHHH-----------HHHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 147 IFCAPPSRSLD--------YPGD-----------VRLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 147 i~~a~~~~~~~--------~~~~-----------~~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
||+|+...... +.+. .+.++ ++.....++|++||...+-.. |. ..
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~------------~~-~~ 150 (256)
T d1k2wa_ 84 VNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE------------AL-VG 150 (256)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------TT-CH
T ss_pred EeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc------------cc-cc
Confidence 99999754321 1111 11111 122235789999997754221 11 24
Q ss_pred HHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 205 PRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|+.+|.+.+.+.+.. + +..+-|+.+-.+.
T Consensus 151 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~ 189 (256)
T d1k2wa_ 151 VYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH 189 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTT
T ss_pred chhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchh
Confidence 7999998888765543 2 6778999887664
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.55 E-value=3.7e-08 Score=78.33 Aligned_cols=66 Identities=17% Similarity=0.305 Sum_probs=53.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee-ecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-SLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~-d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|||.|+|+|.+|+.+++.|.+. ||+|++++|+++..+...+.++.. ...+.+.+.++|+||.++++
T Consensus 1 MkI~iIG~G~mG~~lA~~l~~~--g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp~ 67 (165)
T d2f1ka2 1 MKIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPI 67 (165)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCcH
Confidence 7899999999999999999999 999999999987666555555432 23444678999999988864
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.53 E-value=3.2e-07 Score=78.09 Aligned_cols=135 Identities=11% Similarity=0.062 Sum_probs=89.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----CeeeecCCc-----------cccCCCCE
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWT-----------EATQKFPY 145 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~v~~d~~d~-----------~~~~~~D~ 145 (267)
.-|.+||||+ +-||++++++|.++ |++|+..+|+++..+++.+. .+.+|+.|+ +...+.|+
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNS--GARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3478999996 89999999999999 99999999987766554321 234566554 24468999
Q ss_pred EEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 146 VIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 146 Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
+||+|+.... . + |.+.+ +.++ +.. +..++|++||...+-.. |. .
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~-~~G~Ii~isS~~~~~~~------------~~-~ 148 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRK-SQGNVINISSLVGAIGQ------------AQ-A 148 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCHHHHHCC------------TT-C
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHh-CCCCCcccccccccccc------------cC-c
Confidence 9999985432 1 1 11111 1111 112 23799999998765321 11 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..|+.+|...+.+.+.. + +..+-|+.+.-+
T Consensus 149 ~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~ 187 (250)
T d1ydea1 149 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTP 187 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCH
T ss_pred chhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCh
Confidence 47999998888765543 2 677899988543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.53 E-value=2.8e-07 Score=78.83 Aligned_cols=136 Identities=13% Similarity=0.040 Sum_probs=89.8
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~ 141 (267)
.-+.+||||+ +-||+++++.|.++ |++|+..+|+++..+++ ...+ +.+|+.|+ +...
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEE--GTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3478999996 89999999999999 99999999987655433 2222 33455553 2456
Q ss_pred CCCEEEEccCCCCC-CC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 142 KFPYVIFCAPPSRS-LD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~-~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
+.|++||+|+.... .. |...+ +.++ +...+..++|++||...+...
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~------------ 149 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP------------ 149 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC------------
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC------------
Confidence 89999999986532 11 11111 1111 122356799999997755321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|...+.+.+.. + +..+-|+.+--+
T Consensus 150 ~~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~ 191 (260)
T d1zema1 150 PN-MAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPG 191 (260)
T ss_dssp TT-BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSS
T ss_pred cc-hHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCc
Confidence 11 247999998888765543 2 677899988654
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=3.8e-07 Score=77.87 Aligned_cols=135 Identities=16% Similarity=0.110 Sum_probs=85.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-------eeeecCCc-----------cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-------ITPSLKWT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-------v~~d~~d~-----------~~~~ 141 (267)
+.+||||+ +-||.++++.|.++ |++|+..+|++++.+++ ...+ +.+|+.|+ +...
T Consensus 11 Kv~lITGas~GIG~aiA~~la~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g 88 (257)
T d1xg5a_ 11 RLALVTGASGGIGAAVARALVQQ--GLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 88 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 67999996 89999999999999 99999999987765443 2222 23456554 2456
Q ss_pred CCCEEEEccCCCCCCC--------hHHH-----------HHHHHH--HhC--CCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGD-----------VRLAAL--SWN--GEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~-----------~~~l~~--~~~--~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+.|++||+|+...... +... .+.++. ... ...++|++||+.-+... |.
T Consensus 89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------p~ 159 (257)
T d1xg5a_ 89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL---------PL 159 (257)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC---------SC
T ss_pred CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC---------CC
Confidence 8999999998654321 1111 111111 112 35799999998754321 11
Q ss_pred CCCCCCHHHHHHHHHHHHHHH----c-----C--eeEEeeCcccc
Q 024494 199 VPIGRSPRTDVLLKAEKVILE----F-----G--GCVLRLAGLYI 232 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~----~-----~--~~IlR~~~iyG 232 (267)
+ ....|+.+|...+.+.+. + + +..+-|+.+=.
T Consensus 160 -~-~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t 202 (257)
T d1xg5a_ 160 -S-VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVET 202 (257)
T ss_dssp -G-GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCS
T ss_pred -c-ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCC
Confidence 1 123689999888766432 1 2 55677776543
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.51 E-value=3.2e-07 Score=78.08 Aligned_cols=135 Identities=10% Similarity=0.035 Sum_probs=89.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
|.+||||+ +-||++++++|.++ |++|+..+|+++..+++ ...+ +..|+.|+ +...+.
T Consensus 11 KvalITGas~GIG~a~a~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKS--VSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTT--SSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 66889996 88999999999999 99999999987655432 2222 23456554 245689
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+|+...... +.+.+ +.++ +...+.+++|++||...+-.. |.
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------------~~- 155 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN------------VG- 155 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------TT-
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCC------------CC-
Confidence 99999998654321 11111 1111 122356799999997755321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.. + +..+-|+.+-.+.
T Consensus 156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~ 196 (251)
T d2c07a1 156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 196 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC--
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccc
Confidence 247999999888775543 3 6779999988765
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.51 E-value=4.6e-07 Score=77.42 Aligned_cols=135 Identities=17% Similarity=0.145 Sum_probs=88.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCc-----------ccc-CC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWT-----------EAT-QK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~-----------~~~-~~ 142 (267)
|++||||+ +-||++++++|+++ |++|+.++|++++.++.. ..+ +..|+.+. +.. ..
T Consensus 7 K~alITGas~GIG~aia~~la~~--G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 7 TTALVTGGSKGIGYAIVEELAGL--GARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 78999996 99999999999999 999999999976554332 222 23455443 123 35
Q ss_pred CCEEEEccCCCCCCC--------hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|+++++|+...... |...+. .+. +...+..++|++||....... |.
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~------------~~ 152 (258)
T d1ae1a_ 85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL------------PS 152 (258)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC------------TT
T ss_pred cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccccccc------------cc
Confidence 899999998654321 111111 111 122356799999998765321 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.+.. + +-.+.|+.+..+.
T Consensus 153 -~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 193 (258)
T d1ae1a_ 153 -VSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPL 193 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---
T ss_pred -chhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcc
Confidence 247999998888776543 2 6779999997664
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.50 E-value=2.9e-07 Score=78.18 Aligned_cols=134 Identities=13% Similarity=0.069 Sum_probs=88.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c-----CeeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M-----GITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~-----~v~~d~~d~-----------~~~~~~ 143 (267)
+.+||||+ +=||++++++|.++ |++|+..+|++++.+++.+ . .+.+|+.|+ +.....
T Consensus 8 kv~lITGas~GIG~~ia~~la~~--G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i 85 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKL--KSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 85 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 78999996 88999999999999 9999999999876554321 1 234466554 245689
Q ss_pred CEEEEccCCCCCCC----hHHHHH-----------H----HH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD----YPGDVR-----------L----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~----~~~~~~-----------~----l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+|+...... ..+..+ . ++ +...+.+++|.+||...+-.. |.
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~------------~~- 152 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSV------------PF- 152 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCH------------HH-
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCC------------CC-
Confidence 99999999764321 111111 1 11 123456799999998765321 11
Q ss_pred CCHHHHHHHHHHHHHHH-------c---C--eeEEeeCccccC
Q 024494 203 RSPRTDVLLKAEKVILE-------F---G--GCVLRLAGLYIS 233 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~-------~---~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+.+. + + +..+.||.+--+
T Consensus 153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~ 195 (244)
T d1yb1a_ 153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCCh
Confidence 24699999887655332 1 2 677889876543
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.49 E-value=7.5e-07 Score=76.27 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=89.8
Q ss_pred CCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----c----CeeeecCCc-----------cccC
Q 024494 82 VGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----M----GITPSLKWT-----------EATQ 141 (267)
Q Consensus 82 ~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~----~v~~d~~d~-----------~~~~ 141 (267)
..-|.+||||+ +-||++++++|+++ |++|+..+|++++.+++.+ . .+.+|+.|+ +...
T Consensus 4 L~gKvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (268)
T d2bgka1 4 LQDKVAIITGGAGGIGETTAKLFVRY--GAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG 81 (268)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 33478999996 88999999999999 9999999998766543321 1 134566654 2456
Q ss_pred CCCEEEEccCCCCCC-----C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL-----D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
+.|++||+|+..... + +...+ +.++ +...+..++|++||...+-...
T Consensus 82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~---------- 151 (268)
T d2bgka1 82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGE---------- 151 (268)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCT----------
T ss_pred CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCcccccccccccccc----------
Confidence 899999999854321 1 11111 1111 1223567899999876543211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+. ...|+.+|.+.+.+.+.. + +..+-|+.+..+.
T Consensus 152 -~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 194 (268)
T d2bgka1 152 -GV-SHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 194 (268)
T ss_dssp -TS-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCC
T ss_pred -cc-ccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChH
Confidence 10 126889998888765543 2 6778999887664
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.49 E-value=3.7e-07 Score=77.89 Aligned_cols=134 Identities=14% Similarity=0.154 Sum_probs=89.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
+.+||||+ +-||++++++|.++ |++|+..+|++++.+++ ...+ +.+|+.|+ +.+.+.
T Consensus 12 K~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~i 89 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATA--GASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 78999996 89999999999999 99999999987655432 2222 34566554 234689
Q ss_pred CEEEEccCCCCCC--C-----hHHHHH-------H----HH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSL--D-----YPGDVR-------L----AA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 144 D~Vi~~a~~~~~~--~-----~~~~~~-------~----l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
|++||+|+..... + |.+.+. . ++ +...+..++|++||...+... |. .
T Consensus 90 DilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~------------~~-~ 156 (255)
T d1fmca_ 90 DILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN------------IN-M 156 (255)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC------------TT-C
T ss_pred CEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc------------cc-c
Confidence 9999999965432 1 111111 1 11 122355689999987654321 11 3
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
..|+.+|.+.+.+.+.. + +..+-|+.+..+
T Consensus 157 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 195 (255)
T d1fmca_ 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD 195 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcCh
Confidence 47999998888765542 3 677889988655
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.48 E-value=1.2e-06 Score=74.25 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=86.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCch--hhhccC-----eeeecCCc-----------cccCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHD--ELINMG-----ITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~--~l~~~~-----v~~d~~d~-----------~~~~~~D 144 (267)
-+.+||||+ +-||+++++.|.++ |++|+..+|++.... .+...+ +..|+.|+ +.+.+.|
T Consensus 5 gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD 82 (247)
T d2ew8a1 5 DKLAVITGGANGIGRAIAERFAVE--GADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 82 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence 377899996 89999999999999 999999999865321 122222 34466554 2356899
Q ss_pred EEEEccCCCCCCC--------hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGR 203 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~ 203 (267)
++||+|+...... +.+.+. .++ +...+..++|++||....... |. .
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~~-~ 149 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI------------EA-Y 149 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC------------SS-C
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC------------cc-c
Confidence 9999999764321 111111 111 122356799999997654211 11 2
Q ss_pred CHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 204 SPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 204 ~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
..|+.+|.+.+.+.+.. + +..+-|+.+--+.
T Consensus 150 ~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 189 (247)
T d2ew8a1 150 THYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 189 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----
T ss_pred ccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcc
Confidence 47999998888765442 3 6778899887654
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.48 E-value=1.5e-06 Score=73.26 Aligned_cols=138 Identities=11% Similarity=-0.004 Sum_probs=85.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHh---cCCCCeEEEEeCCCCCchhhhc-----cC---eeeecCCcc-------------
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN-----MG---ITPSLKWTE------------- 138 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~---~~pG~~V~~l~R~~~~~~~l~~-----~~---v~~d~~d~~------------- 138 (267)
|++|||||+ +-||++++++|++ + |++|+..+|++++.+++.+ .. +.+|+.|++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~ 79 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQP--PQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 79 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSC--CSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence 789999996 7899999999974 6 8999999999887765432 12 344665541
Q ss_pred ccCCCCEEEEccCCCCCC----C-----hHHHH-----------HHH---HHHh----------CCCCcEEEEcCCcccc
Q 024494 139 ATQKFPYVIFCAPPSRSL----D-----YPGDV-----------RLA---ALSW----------NGEGSFLFTSSSAIYD 185 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~----~-----~~~~~-----------~~l---~~~~----------~~v~r~V~~SS~~VYg 185 (267)
...+.|++|++|+..... + +.+.+ +.+ +.+. .+..++|.+||..-+
T Consensus 80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~- 158 (248)
T d1snya_ 80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS- 158 (248)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC-
T ss_pred hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-
Confidence 124689999999864321 1 11111 111 1111 135689999985422
Q ss_pred CCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 186 CSDNGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 186 ~~~~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
.. ..+ .+. ...|+.+|.+...+.+.. + +..+.||.+--+
T Consensus 159 -~~------~~~-~~~-~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 159 -IQ------GNT-DGG-MYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp -ST------TCC-SCC-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred -cC------CCC-CCC-hHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 11 011 121 247999998877664432 3 677888887544
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.47 E-value=6.8e-07 Score=76.32 Aligned_cols=135 Identities=13% Similarity=0.056 Sum_probs=88.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c--cC-----eeeecCCc-----------ccc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N--MG-----ITPSLKWT-----------EAT 140 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~--~~-----v~~d~~d~-----------~~~ 140 (267)
-+.+||||+ +-||++++++|.++ |++|+..+|+.++.++.. . .+ +..|+.|+ +.+
T Consensus 4 gK~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 4 DRVVLITGGGSGLGRATAVRLAAE--GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 378999996 89999999999999 999999999876543321 1 11 23466654 245
Q ss_pred CCCCEEEEccCCCCC-C---C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRS-L---D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~-~---~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.+.|++||+||.... . + |.+.+ +.++ +...+..++|++||...+-..
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~----------- 150 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI----------- 150 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC-----------
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC-----------
Confidence 689999999985432 1 1 11111 1111 122356899999997754211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|...+.+.+.. + +..+-|+.+.-+
T Consensus 151 -~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~ 192 (258)
T d1iy8a_ 151 -GN-QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 192 (258)
T ss_dssp -SS-BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSH
T ss_pred -CC-chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCH
Confidence 11 247999998887665432 3 677899988654
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.47 E-value=6.8e-07 Score=76.29 Aligned_cols=134 Identities=15% Similarity=0.088 Sum_probs=87.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCc-----------cccC-C
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWT-----------EATQ-K 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~-----------~~~~-~ 142 (267)
+.+||||+ +-||++++++|.++ |++|+..+|++++.++.. ..+ +..|+.|+ +.+. .
T Consensus 9 K~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASL--GASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 78999996 89999999999999 999999999876654332 222 23455553 1234 5
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|++||+|+...... +.+.+ +.++ +...+..++|++||....... |.
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~------------~~ 154 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAV------------PY 154 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCC------------TT
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccccccccc------------cc
Confidence 899999999654321 11111 1111 122356799999997653211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|..+|...+.+.+.. + +..+-|+.+--+
T Consensus 155 -~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~ 194 (259)
T d2ae2a_ 155 -EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATS 194 (259)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSH
T ss_pred -ccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCH
Confidence 347999998888765543 2 677899988644
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.46 E-value=6.7e-07 Score=75.55 Aligned_cols=132 Identities=16% Similarity=0.150 Sum_probs=87.1
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCe-------EEEEeCCCCCchhhh----ccC-----eeeecCCc-----------c
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQ-------IYGQTMTADHHDELI----NMG-----ITPSLKWT-----------E 138 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~-------V~~l~R~~~~~~~l~----~~~-----v~~d~~d~-----------~ 138 (267)
|||||+ +-||++++++|.++ |++ |+..+|+.++.+++. ..+ +.+|+.|+ +
T Consensus 4 vlITGas~GIG~aia~~la~~--G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARA--ARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHH--TTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred EEEccCCCHHHHHHHHHHHHh--CccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 689996 78999999999999 987 889999876654432 222 34466654 2
Q ss_pred ccCCCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 139 ATQKFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
...+.|++||+|+...... +.+.+ +.++ +...+.+++|++||...+...
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~---------- 151 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAF---------- 151 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----------
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCC----------
Confidence 4568999999999654321 11111 1111 122356799999998765321
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +..+-|+.+--+
T Consensus 152 --~~-~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~ 193 (240)
T d2bd0a1 152 --RH-SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTP 193 (240)
T ss_dssp --TT-CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCST
T ss_pred --CC-ChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCc
Confidence 11 247999998887665432 3 677889888655
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.45 E-value=1.4e-06 Score=74.50 Aligned_cols=135 Identities=13% Similarity=0.115 Sum_probs=87.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~-----------~~~~~ 142 (267)
+.+||||+ +-||++++++|.++ |++|+..+|+.+. .+. +...+ +..|+.|+ +.+.+
T Consensus 8 K~alITGas~GIG~aia~~la~~--G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATE--KAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 67899996 88999999999999 9999999998643 222 22222 33456554 23468
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCC-CCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNG-EGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.|++||+|+...... +.+.+ +.++ +...+ ...+|++||...+... |
T Consensus 86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~------------~ 153 (261)
T d1geea_ 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW------------P 153 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------------T
T ss_pred CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC------------c
Confidence 999999999754321 11111 1111 12233 3458889987654211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.+.+.+.. + +..+-|+.+.-+.
T Consensus 154 ~-~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~ 195 (261)
T d1geea_ 154 L-FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPI 195 (261)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGG
T ss_pred c-ccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHh
Confidence 1 247999999888775543 2 6778999987664
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.45 E-value=4.9e-07 Score=77.09 Aligned_cols=135 Identities=12% Similarity=0.046 Sum_probs=86.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC-Cchhhh----c-cC-----eeeecCCc-----------cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD-HHDELI----N-MG-----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~-~~~~l~----~-~~-----v~~d~~d~-----------~~~~ 141 (267)
+.+||||+ +-||++++++|.++ |++|+..+|+.. ..+++. . .+ +..|+.|+ +...
T Consensus 5 K~alITGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 82 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQ--GADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 67899996 88999999999999 999999999753 222221 1 12 23466554 2346
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
+.|++||+||...... +.+.+ +.++ +...+..++|++||...+... |
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~ 150 (260)
T d1x1ta1 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS------------A 150 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------------T
T ss_pred CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceecc------------C
Confidence 8999999999654321 11111 1111 122356799999998754321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|...+.+.+.. + +..+.|+.+--+.
T Consensus 151 ~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~ 192 (260)
T d1x1ta1 151 N-KSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192 (260)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--
T ss_pred C-cchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChh
Confidence 1 247999998888765543 2 6779999886553
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=6.5e-07 Score=76.12 Aligned_cols=133 Identities=12% Similarity=0.010 Sum_probs=87.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc-------CeeeecCCc-----------cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM-------GITPSLKWT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~-------~v~~d~~d~-----------~~~~ 141 (267)
|.+||||+ +-||++++++|.++ |++|+.++|+.++..+.. +. .+.+|+.|+ +...
T Consensus 4 KvalITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLK--GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 77999996 88999999999999 999999999876543221 11 133466554 2346
Q ss_pred CCCEEEEccCCCCCCChHHHHH-----------HHH--H-Hh-CC-CCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 142 KFPYVIFCAPPSRSLDYPGDVR-----------LAA--L-SW-NG-EGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~~~~~~~-----------~l~--~-~~-~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
+.|++||+|+.....++.+.+. ..+ + +. .+ ..++|.+||...+-.. |. ...
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~------------~~-~~~ 148 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV------------AQ-QPV 148 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------TT-CHH
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC------------CC-ccc
Confidence 8999999999876655433221 111 1 11 12 3579999998754211 11 247
Q ss_pred HHHHHHHHHHHHH------H---cC--eeEEeeCcccc
Q 024494 206 RTDVLLKAEKVIL------E---FG--GCVLRLAGLYI 232 (267)
Q Consensus 206 y~~~k~~aE~~l~------~---~~--~~IlR~~~iyG 232 (267)
|+.+|...+.+.+ + .+ +..+-|+.+--
T Consensus 149 Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T 186 (254)
T d2gdza1 149 YCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNT 186 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSS
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCC
Confidence 9999987776543 2 23 67788988743
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.44 E-value=7.1e-07 Score=75.83 Aligned_cols=137 Identities=12% Similarity=0.037 Sum_probs=86.9
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc--------cCeeeecCCc-----------cccCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN--------MGITPSLKWT-----------EATQK 142 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~--------~~v~~d~~d~-----------~~~~~ 142 (267)
.-+.+||||+ +-||++++++|.++ |++|+..+|+++..+++.+ ..+..|+.|+ +.+.+
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEE--GAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3478999996 89999999999999 9999999998765543321 1133456554 24568
Q ss_pred CCEEEEccCCCCCCC--------hHHHHH-----------HHH--HHhCCC-CcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDVR-----------LAA--LSWNGE-GSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-----------~l~--~~~~~v-~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.|++||+|+...... |.+.+. .++ +...+. .++|++||...+-.. |
T Consensus 83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~------------~ 150 (251)
T d1zk4a1 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD------------P 150 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC------------T
T ss_pred ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC------------C
Confidence 999999998754321 211111 111 112233 489999997654211 1
Q ss_pred CCCCHHHHHHHHHHHHHH---------HcC--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVIL---------EFG--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~---------~~~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|...+.+.+ ..+ +..+-|+.+-.+.
T Consensus 151 ~-~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~ 194 (251)
T d1zk4a1 151 S-LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194 (251)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHH
T ss_pred C-chhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChh
Confidence 1 2478888877765432 223 6678999886553
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.43 E-value=4.5e-07 Score=76.02 Aligned_cols=132 Identities=14% Similarity=0.199 Sum_probs=80.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----------c--ccCCCCEEEEcc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------E--ATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----------~--~~~~~D~Vi~~a 150 (267)
.||||||+ |-||++++++|.++ |++|+.++|+++..... ...+..+..+. . ...+.|++||+|
T Consensus 3 gkVlITGas~GIG~aia~~l~~~--G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnA 79 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKN--GYTVLNIDLSANDQADS-NILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVA 79 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCCTTSSE-EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCchhcccc-cceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECC
Confidence 57999996 99999999999999 99999999986543211 01111111110 1 235689999999
Q ss_pred CCCCC----C-ChHHHHH-----HH------H---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 151 PPSRS----L-DYPGDVR-----LA------A---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 151 ~~~~~----~-~~~~~~~-----~l------~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
|.... . +..+... ++ . ... .+..++|++||...+... |. ...|+.+|
T Consensus 80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~------------~~-~~~Y~asK 146 (235)
T d1ooea_ 80 GGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT------------PS-MIGYGMAK 146 (235)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TT-BHHHHHHH
T ss_pred cccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc------------cc-ccchHHHH
Confidence 85322 1 1111111 11 0 111 133689999998754321 11 24899999
Q ss_pred HHHHHHHHHc---------C--eeEEeeCcccc
Q 024494 211 LKAEKVILEF---------G--GCVLRLAGLYI 232 (267)
Q Consensus 211 ~~aE~~l~~~---------~--~~IlR~~~iyG 232 (267)
.+.+.+.+.. + +..+.|+.+--
T Consensus 147 aal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T 179 (235)
T d1ooea_ 147 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT 179 (235)
T ss_dssp HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC
T ss_pred HHHHHHHHHHHHHhccCCCceEEEEEecCcCcC
Confidence 9998876543 1 44467777643
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.42 E-value=9.3e-07 Score=75.18 Aligned_cols=134 Identities=12% Similarity=0.033 Sum_probs=87.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
|.+||||+ +-||++++++|.++ |++|+..+|++++.++. ...+ +..|+.|+ +...+.
T Consensus 3 KValITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKE--GLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 80 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 34589996 88999999999999 99999999987655432 2222 23456554 245689
Q ss_pred CEEEEccCCCCCCC--------hHHHHH-------HHH---H-----HhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGDVR-------LAA---L-----SWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~-----~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
|++||+||...... |.+.+. .+. . ...+..++|.+||...+... |
T Consensus 81 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~------------~ 148 (257)
T d2rhca1 81 DVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV------------V 148 (257)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC------------T
T ss_pred CEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc------------c
Confidence 99999999754321 111111 111 1 11245689999987654321 1
Q ss_pred CCCCHHHHHHHHHHHHHHH----cC-----eeEEeeCccccC
Q 024494 201 IGRSPRTDVLLKAEKVILE----FG-----GCVLRLAGLYIS 233 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~----~~-----~~IlR~~~iyGp 233 (267)
. ...|+.+|...+.+.+. ++ +..+-|+.+--+
T Consensus 149 ~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 189 (257)
T d2rhca1 149 H-AAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP 189 (257)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSH
T ss_pred c-chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCH
Confidence 1 24799999888876554 32 677889888543
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.40 E-value=8.3e-07 Score=75.64 Aligned_cols=142 Identities=14% Similarity=0.047 Sum_probs=88.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-----ccC-----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-----NMG-----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-----~~~-----v~~d~~d~-----------~~~~~ 142 (267)
|++||||+ +-||++++++|+++ |++|+.++|+.++..+.. ..+ +.+|+.|+ +...+
T Consensus 10 K~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAA--GANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 67999996 89999999999999 999999999987654321 112 34466554 24568
Q ss_pred CCEEEEccCCCCCCC--------hHHHH-----------HHHH---HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDV-----------RLAA---LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~---~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
.|++||+|+...... +.+.+ +.++ .......+++..++...+...... . ...+
T Consensus 88 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~-~----~~~~ 162 (260)
T d1h5qa_ 88 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS-L----NGSL 162 (260)
T ss_dssp EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE-T----TEEC
T ss_pred CcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc-c----ccCc
Confidence 999999998654321 11111 1111 122345567777776654322100 0 0011
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
. ...|+.+|.+.+.+.+.. + +-.+-|+.+--+.
T Consensus 163 ~-~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~ 204 (260)
T d1h5qa_ 163 T-QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQ 204 (260)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGG
T ss_pred c-ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcc
Confidence 1 247999998888765442 3 6778999886554
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.40 E-value=1.1e-06 Score=74.61 Aligned_cols=134 Identities=13% Similarity=0.016 Sum_probs=89.1
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc---cCeeeecCCc-----------cccCCCCEEEEcc
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN---MGITPSLKWT-----------EATQKFPYVIFCA 150 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~---~~v~~d~~d~-----------~~~~~~D~Vi~~a 150 (267)
+.||||+ +-||+.++++|.++ |++|++.+|+.+..+++.. .....|+.+. +.+.+.|++||+|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~--Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEA--GHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHT--TCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5799997 88999999999999 9999999998777655432 2233444332 2456899999998
Q ss_pred CCCCC-C---C-----hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHH
Q 024494 151 PPSRS-L---D-----YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTD 208 (267)
Q Consensus 151 ~~~~~-~---~-----~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~ 208 (267)
+.... . + +.+.+. .++ +...+..++|++||...+... |. ...|+.
T Consensus 80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~------------~~-~~~Y~a 146 (252)
T d1zmta1 80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW------------KE-LSTYTS 146 (252)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC------------TT-CHHHHH
T ss_pred cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc------------cc-cccccc
Confidence 85421 1 1 211111 111 122356899999998765321 11 247999
Q ss_pred HHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 209 VLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 209 ~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+|...+.+.+.. + +-.+-|+.+-.+.
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~ 181 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 181 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBT
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcc
Confidence 998888765543 2 7789999886553
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.39 E-value=1.2e-06 Score=76.23 Aligned_cols=137 Identities=8% Similarity=0.048 Sum_probs=86.5
Q ss_pred CCCCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh----hhc-----cC-----eeeecCCc--------
Q 024494 81 GVGENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE----LIN-----MG-----ITPSLKWT-------- 137 (267)
Q Consensus 81 ~~~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~----l~~-----~~-----v~~d~~d~-------- 137 (267)
...-+.+||||+ +-||++++++|.++ |++|++.+|+.++... +.. .+ +.+|+.|+
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~--Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~ 86 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLEL--GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK 86 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence 344588999996 88999999999999 9999999998765432 211 11 23455554
Q ss_pred ---cccCCCCEEEEccCCCCCCC--------hHHHH-------HHHH---H---HhCCCCcEEEEcCCccccCCCCCccC
Q 024494 138 ---EATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA---L---SWNGEGSFLFTSSSAIYDCSDNGACD 193 (267)
Q Consensus 138 ---~~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~---~---~~~~v~r~V~~SS~~VYg~~~~~~~~ 193 (267)
+...+.|++||+|+...... +...+ ..+. . ...+..++|.+|+....+.
T Consensus 87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~------- 159 (297)
T d1yxma1 87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF------- 159 (297)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-------
T ss_pred HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-------
Confidence 23568999999998654321 11111 1111 1 1124567887766433221
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +-.+-|+.+.-+
T Consensus 160 ------~~-~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~ 201 (297)
T d1yxma1 160 ------PL-AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQ 201 (297)
T ss_dssp ------TT-CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCT
T ss_pred ------cc-cccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCc
Confidence 11 247888998888765543 2 677899988655
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.38 E-value=4.1e-07 Score=76.88 Aligned_cols=134 Identities=17% Similarity=0.141 Sum_probs=84.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cC-----eeeecCCc-----------cccCCCCE
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MG-----ITPSLKWT-----------EATQKFPY 145 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~-----v~~d~~d~-----------~~~~~~D~ 145 (267)
-+++||||+ +-||+.++++|.++ |++|+..+|+.++..++.+ .+ +..|+.++ +...+.|+
T Consensus 5 gK~alItGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 5 GKTILVTGAASGIGRAALDLFARE--GASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 478999996 89999999999999 9999999998776544322 22 34466554 23468999
Q ss_pred EEEccCCCCCCC--------hHHHHH-------HHH---HHh-CCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHH
Q 024494 146 VIFCAPPSRSLD--------YPGDVR-------LAA---LSW-NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPR 206 (267)
Q Consensus 146 Vi~~a~~~~~~~--------~~~~~~-------~l~---~~~-~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y 206 (267)
+||+|+...... +.+.+. .+. ... ...+.++.+|+.+.... | +...|
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-------------~-~~~~Y 148 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-------------F-GLAHY 148 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-------------H-HHHHH
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-------------c-Ccccc
Confidence 999998653321 111111 111 111 23445555555443211 1 12468
Q ss_pred HHHHHHHHHHHHHc----C-----eeEEeeCccccC
Q 024494 207 TDVLLKAEKVILEF----G-----GCVLRLAGLYIS 233 (267)
Q Consensus 207 ~~~k~~aE~~l~~~----~-----~~IlR~~~iyGp 233 (267)
+.+|.+.|.+.+.. + +-.+-||.+-.+
T Consensus 149 ~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~ 184 (241)
T d2a4ka1 149 AAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTP 184 (241)
T ss_dssp HHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCG
T ss_pred chhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCH
Confidence 88898888776543 2 677899988554
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.38 E-value=2.3e-06 Score=73.76 Aligned_cols=137 Identities=13% Similarity=0.028 Sum_probs=86.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c-c-----CeeeecCCc-----------ccc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-M-----GITPSLKWT-----------EAT 140 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~-~-----~v~~d~~d~-----------~~~ 140 (267)
.-|++||||+ |-||++++++|.++ |++|+.++|+.++..+.. . . .+..|+.+. +..
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~--Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 101 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSL--GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 101 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence 3378999996 89999999999999 999999999876543321 1 1 123455443 245
Q ss_pred CCCCEEEEccCCCCCCC--------hHHHHH-------HHH-------HHhCCCCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YPGDVR-------LAA-------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~-------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
.+.|++||+|+...... +..... .+. ........++.+|+.......
T Consensus 102 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~----------- 170 (294)
T d1w6ua_ 102 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS----------- 170 (294)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----------
T ss_pred cccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-----------
Confidence 78999999999765432 111100 000 111234567777765543221
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|.+.+.+.+.. + +-.+-||.+-.+.
T Consensus 171 -~~-~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~ 213 (294)
T d1w6ua_ 171 -GF-VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 213 (294)
T ss_dssp -TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred -cc-cchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccch
Confidence 11 246999999888776643 2 6778999986553
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.36 E-value=1.5e-06 Score=74.72 Aligned_cols=135 Identities=14% Similarity=0.093 Sum_probs=85.6
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC--------eeeecCCc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG--------ITPSLKWT-----------EA 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~--------v~~d~~d~-----------~~ 139 (267)
-+++||||+ +-||++++++|+++ |++|+..+|+.++.++. ...+ +..|+.|+ +.
T Consensus 4 gK~alITGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 4 GKSVIITGSSNGIGRSAAVIFAKE--GAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 378999996 88999999999999 99999999987655432 2221 23455554 23
Q ss_pred cCCCCEEEEccCCCCCC--C--------hHHHHH-----------HHH--HHhCCCCcEEEEcCCccccCCCCCccCCCC
Q 024494 140 TQKFPYVIFCAPPSRSL--D--------YPGDVR-----------LAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDS 196 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~--~--------~~~~~~-----------~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~ 196 (267)
+...|++||+|+..... . |...+. .++ +...+..+++++||...+...
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~--------- 152 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAH--------- 152 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCC---------
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccC---------
Confidence 46899999999854221 0 111111 111 122345677777765533211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 197 PVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 197 p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
| ....|+.+|.+.+.+.+.. + +..+-|+.+--+
T Consensus 153 ---~-~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~ 194 (274)
T d1xhla_ 153 ---S-GYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATG 194 (274)
T ss_dssp ---T-TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSS
T ss_pred ---C-CCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCc
Confidence 1 1247999998888765442 2 677899998654
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.35 E-value=1e-06 Score=74.91 Aligned_cols=136 Identities=10% Similarity=0.038 Sum_probs=86.7
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCc-----------cccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~-----------~~~~~~D 144 (267)
.-|.+||||+ +-||++++++|+++ |++|+..+|++++.+++.+ . .+..|+.|. +.....|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~--Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 82 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGE--GAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 3478999996 88999999999999 9999999998766544432 1 223455553 2456899
Q ss_pred EEEEccCCCCCCC--------hHHHHH-----------HHHHH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCC
Q 024494 145 YVIFCAPPSRSLD--------YPGDVR-----------LAALS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRS 204 (267)
Q Consensus 145 ~Vi~~a~~~~~~~--------~~~~~~-----------~l~~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~ 204 (267)
++||+|+...... |.+.+. .++.. .....++|++||...+-.. |. ..
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~------------~~-~~ 149 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI------------EQ-YA 149 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC------------TT-BH
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc------------cc-cc
Confidence 9999999654321 211111 11111 1234789999997654211 11 24
Q ss_pred HHHHHHHHHHHHHHHc---------C--eeEEeeCccccC
Q 024494 205 PRTDVLLKAEKVILEF---------G--GCVLRLAGLYIS 233 (267)
Q Consensus 205 ~y~~~k~~aE~~l~~~---------~--~~IlR~~~iyGp 233 (267)
.|+.+|.+.+.+.+.. + +..+-|+.+..+
T Consensus 150 ~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~ 189 (253)
T d1hxha_ 150 GYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTP 189 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCH
T ss_pred cccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCH
Confidence 7999998877654321 2 455888877644
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.35 E-value=1.2e-06 Score=74.86 Aligned_cols=135 Identities=18% Similarity=0.158 Sum_probs=81.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC-----eeeecCCc-----------ccc-CC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG-----ITPSLKWT-----------EAT-QK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~-----v~~d~~d~-----------~~~-~~ 142 (267)
+++||||+ +-||++++++|+++ |++|+.++|++++.++.. ..+ +.+|+.|+ +.+ ..
T Consensus 9 K~alVTGas~GIG~aiA~~la~~--Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 9 KTVLVTGGTKGIGHAIVEEFAGF--GAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 78999996 89999999999999 999999999876654332 112 23455543 123 45
Q ss_pred CCEEEEccCCCCCC---C-----hHHHH-------HHHH------HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSL---D-----YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPI 201 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~---~-----~~~~~-------~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~ 201 (267)
.|++||+|+..... + +...+ ..+. +...+..++|++||....-.. |.
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~------------~~ 154 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSA------------SV 154 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------------
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccc------------cc
Confidence 89999999965421 1 11111 1111 122356899999997654211 11
Q ss_pred CCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 202 GRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 202 ~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.. + +-.+-|+.+--+.
T Consensus 155 -~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~ 195 (259)
T d1xq1a_ 155 -GSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPL 195 (259)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC---
T ss_pred -cccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHH
Confidence 247999999888765543 2 6778898886554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.34 E-value=1.7e-06 Score=72.49 Aligned_cols=133 Identities=12% Similarity=0.116 Sum_probs=81.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-----------c--ccCCCCEEEEcc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-----------E--ATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-----------~--~~~~~D~Vi~~a 150 (267)
|+|||||+ |-||++++++|.++ |++|..+++........ ......+..+. + ...+.|++||+|
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~--G~~V~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnA 79 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRAR--NWWVASIDVVENEEASA-SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVA 79 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSCCTTSSE-EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCccccccc-cceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECC
Confidence 78999996 99999999999999 99999999865432211 01111111110 1 123589999999
Q ss_pred CCCCC----CC-hHHHHH-----H------HH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCHHHHHH
Q 024494 151 PPSRS----LD-YPGDVR-----L------AA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSPRTDVL 210 (267)
Q Consensus 151 ~~~~~----~~-~~~~~~-----~------l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~y~~~k 210 (267)
+.... .+ ..+... + +. .. ..+..++|++||...+... |. ...|+.+|
T Consensus 80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~------------~~-~~~Y~asK 146 (236)
T d1dhra_ 80 GGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT------------PG-MIGYGMAK 146 (236)
T ss_dssp CCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC------------TT-BHHHHHHH
T ss_pred cccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc------------cC-CcccHHHH
Confidence 84221 11 111111 0 10 11 1234789999998754321 11 24799999
Q ss_pred HHHHHHHHHc---------C--eeEEeeCccccC
Q 024494 211 LKAEKVILEF---------G--GCVLRLAGLYIS 233 (267)
Q Consensus 211 ~~aE~~l~~~---------~--~~IlR~~~iyGp 233 (267)
.+.+.+.+.. + +..+.|+.+.-+
T Consensus 147 aal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~ 180 (236)
T d1dhra_ 147 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP 180 (236)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC
Confidence 9998876653 2 566888887654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.31 E-value=2.3e-07 Score=73.71 Aligned_cols=68 Identities=21% Similarity=0.258 Sum_probs=55.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|+||.|+|.|.+|+.++++|+++ ||+|++++|++++...+...+........+....+|+|+.|....
T Consensus 1 M~kIg~IGlG~MG~~iA~~L~~~--g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~ 68 (162)
T d3cuma2 1 MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPAS 68 (162)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCH
T ss_pred CCEEEEEEEHHHHHHHHHHHHHC--CCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccch
Confidence 78999999999999999999999 999999999988777666555544333235778899999998654
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.29 E-value=3.1e-06 Score=71.94 Aligned_cols=134 Identities=8% Similarity=0.005 Sum_probs=87.3
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----c--Ce---eeecC-Cc-----------cccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----M--GI---TPSLK-WT-----------EATQ 141 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~--~v---~~d~~-d~-----------~~~~ 141 (267)
+.|||||+ +-||..++++|+++ |++|+++.|+.++...+.+ . ++ ..|+. +. +...
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~--G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g 83 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKR--NLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--CCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CEEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence 78999996 88999999999999 9999999887766433321 1 12 22433 21 2346
Q ss_pred CCCEEEEccCCCCCCChHHHH-----------HHHH--H-Hh-C-CCCcEEEEcCCccccCCCCCccCCCCCCCCCCCCH
Q 024494 142 KFPYVIFCAPPSRSLDYPGDV-----------RLAA--L-SW-N-GEGSFLFTSSSAIYDCSDNGACDEDSPVVPIGRSP 205 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~~~~~~-----------~~l~--~-~~-~-~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~~~~ 205 (267)
++|++|++||....+++.+.. +.++ + +. . ...++|++||...+... | ....
T Consensus 84 ~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------------~-~~~~ 150 (254)
T d1sbya1 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------------H-QVPV 150 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------------T-TSHH
T ss_pred CCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------------C-CCHH
Confidence 899999999977655432211 1111 1 11 1 34689999987765321 1 1247
Q ss_pred HHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 206 RTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 206 y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|+.+|.+...+.+.. + +..+-|+.+..+
T Consensus 151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~ 187 (254)
T d1sbya1 151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTP 187 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESH
T ss_pred HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCc
Confidence 999998887665432 3 677999998754
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.29 E-value=3.6e-06 Score=73.41 Aligned_cols=134 Identities=13% Similarity=0.067 Sum_probs=84.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc---------hhh----hcc--CeeeecCCc---------
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH---------DEL----INM--GITPSLKWT--------- 137 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~---------~~l----~~~--~v~~d~~d~--------- 137 (267)
.-+.+||||+ +-||++++++|.++ |++|++.+|+.+.. +++ ... ....+..|.
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~--Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAER--GALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 3478999996 78999999999999 99999998864321 111 111 123344432
Q ss_pred --cccCCCCEEEEccCCCCCCC--------hHHHH-------HHHH------HHhCCCCcEEEEcCCccccCCCCCccCC
Q 024494 138 --EATQKFPYVIFCAPPSRSLD--------YPGDV-------RLAA------LSWNGEGSFLFTSSSAIYDCSDNGACDE 194 (267)
Q Consensus 138 --~~~~~~D~Vi~~a~~~~~~~--------~~~~~-------~~l~------~~~~~v~r~V~~SS~~VYg~~~~~~~~E 194 (267)
+...+.|++||+||...... +...+ ..+. +...+.+++|++||...+-..
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~------- 156 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGN------- 156 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-------
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCC-------
Confidence 24568999999999765321 11111 1111 122356799999997754221
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccc
Q 024494 195 DSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (267)
Q Consensus 195 ~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iy 231 (267)
|. ...|+.+|...+.+.+.. + +..+-|+.+-
T Consensus 157 -----~~-~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~ 196 (302)
T d1gz6a_ 157 -----FG-QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGS 196 (302)
T ss_dssp -----TT-CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCS
T ss_pred -----CC-cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCC
Confidence 11 247999998888765442 2 5667787653
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.29 E-value=2.3e-06 Score=73.33 Aligned_cols=70 Identities=16% Similarity=0.218 Sum_probs=52.5
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----cc--------CeeeecCCc-----------c
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NM--------GITPSLKWT-----------E 138 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~--------~v~~d~~d~-----------~ 138 (267)
..|.+||||+ +-||++++++|.++ |++|+..+|++++.++.. +. .+.+|+.|+ +
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~--Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQE--GANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3478999996 89999999999999 999999999876554321 11 133456554 2
Q ss_pred ccCCCCEEEEccCCCC
Q 024494 139 ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 139 ~~~~~D~Vi~~a~~~~ 154 (267)
...+.|++||+|+...
T Consensus 82 ~~g~iDilvnnAG~~~ 97 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAI 97 (272)
T ss_dssp HHSCCCEEEECCCCCC
T ss_pred HhCCceEEEeCCcccC
Confidence 4468999999998653
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=98.29 E-value=1.6e-07 Score=74.60 Aligned_cols=67 Identities=13% Similarity=0.256 Sum_probs=54.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|.|.+|+.+++.|+++ ||+|++++|++++.+.+...+........+..+++|+||.|.+..
T Consensus 1 MkIgiIGlG~MG~~~A~~L~~~--G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~ 67 (161)
T d1vpda2 1 MKVGFIGLGIMGKPMSKNLLKA--GYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNS 67 (161)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSH
T ss_pred CEEEEEehhHHHHHHHHHHHHC--CCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCH
Confidence 7899999999999999999999 999999999998887776656544222225678899999998643
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.29 E-value=1.8e-06 Score=72.94 Aligned_cols=133 Identities=12% Similarity=0.063 Sum_probs=85.5
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhh----hccC-----eeeecCCc-----------cccCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDEL----INMG-----ITPSLKWT-----------EATQKF 143 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~~ 143 (267)
-|||||+ +-||++++++|+++ |++|+..++ +++..+.+ ...+ +..|+.|+ +...+.
T Consensus 3 V~lITGas~GIG~a~a~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 80 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKA--GCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789996 88999999999999 999988765 44333322 2222 34466554 245689
Q ss_pred CEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 144 PYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 144 D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
|++||+|+...... +.+.+ +.++ +...+..++|++||...+-.. |.
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~------------~~- 147 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN------------IG- 147 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC------------TT-
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC------------CC-
Confidence 99999998754321 11111 1111 122356799999998765321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+.+.. + +..+-|+.+--+
T Consensus 148 ~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~ 187 (244)
T d1edoa_ 148 QANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASD 187 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSH
T ss_pred CHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccH
Confidence 247999998888765543 3 677889888654
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=98.27 E-value=3.4e-07 Score=71.96 Aligned_cols=67 Identities=10% Similarity=0.086 Sum_probs=51.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee-------ecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------SLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~-------d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||+|+|+|.+|+.++..|.+. ||+|+.++|++++...+...+.+. ...+.+....+|+||.+....
T Consensus 1 MkI~IiGaG~iG~~~a~~L~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~ 74 (167)
T d1ks9a2 1 MKITVLGCGALGQLWLTALCKQ--GHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAW 74 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGG
T ss_pred CEEEEECcCHHHHHHHHHHHHC--CCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeeccc
Confidence 8999999999999999999999 999999999987665433222111 112335667899999998764
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.27 E-value=3.6e-06 Score=71.07 Aligned_cols=134 Identities=14% Similarity=0.036 Sum_probs=82.1
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEEeCCCCCc---hh----hhccCe-----eeecCCcc----------cc
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHH---DE----LINMGI-----TPSLKWTE----------AT 140 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l~R~~~~~---~~----l~~~~v-----~~d~~d~~----------~~ 140 (267)
..+||||+ |-||+.++++|.++ |++ |+.+.|+.... .+ +...+. .+|+.|.+ ..
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~--Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~ 87 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARR--GAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD 87 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHH--TCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence 57999995 99999999999999 984 77788864322 21 222332 23555531 12
Q ss_pred CCCCEEEEccCCCCCCC--------hH-------HHHHHHHH--HhCCCCcEEEEcCCccc-cCCCCCccCCCCCCCCCC
Q 024494 141 QKFPYVIFCAPPSRSLD--------YP-------GDVRLAAL--SWNGEGSFLFTSSSAIY-DCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 141 ~~~D~Vi~~a~~~~~~~--------~~-------~~~~~l~~--~~~~v~r~V~~SS~~VY-g~~~~~~~~E~~p~~p~~ 202 (267)
...|.|||+++...... +. .+..++.. ...+..++|++||.... |...
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~-------------- 153 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPG-------------- 153 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTT--------------
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcc--------------
Confidence 35889999999654321 11 11112211 12256789999987754 3211
Q ss_pred CCHHHHHHHHHHHHHHHc---C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF---G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~---~--~~IlR~~~iyGp~ 234 (267)
...|+.+|...|.+.++. + ++.+.|+.+.+++
T Consensus 154 ~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g 190 (259)
T d2fr1a1 154 LGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSG 190 (259)
T ss_dssp CTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC---
T ss_pred cHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCc
Confidence 135788888777665543 3 7889999887765
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.27 E-value=2.2e-06 Score=73.59 Aligned_cols=132 Identities=19% Similarity=0.156 Sum_probs=84.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c-----CeeeecCCc-----------cccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M-----GITPSLKWT-----------EATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~-----~v~~d~~d~-----------~~~~~~D~V 146 (267)
+.+||||+ +-||++++++|.++ |++|+.++|++++..++.. . .+..|+.+. +.....|++
T Consensus 6 K~alITGas~GIG~aia~~la~~--Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAE--GAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 78999996 89999999999999 9999999999776654432 1 223455543 245689999
Q ss_pred EEccCCCCCC--------C-----hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 147 IFCAPPSRSL--------D-----YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 147 i~~a~~~~~~--------~-----~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
||+|+..... + |.+.+ +.++ +.. ...++|+++|...+-.. |
T Consensus 84 vnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~-~~g~iI~i~S~~~~~~~------------~ 150 (276)
T d1bdba_ 84 IPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVA-SRGNVIFTISNAGFYPN------------G 150 (276)
T ss_dssp ECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGTSTT------------S
T ss_pred cccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHh-cCCCceeeeechhccCC------------C
Confidence 9999854321 1 11111 0111 111 23688888886543211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc----C----eeEEeeCcccc
Q 024494 201 IGRSPRTDVLLKAEKVILEF----G----GCVLRLAGLYI 232 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~----~----~~IlR~~~iyG 232 (267)
. ...|+.+|.+.+.+.+.. + +..+.|+.+--
T Consensus 151 ~-~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T 189 (276)
T d1bdba_ 151 G-GPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINS 189 (276)
T ss_dssp S-CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCS
T ss_pred C-CchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEec
Confidence 1 247999998888765543 2 67788988754
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=98.23 E-value=5.4e-07 Score=70.70 Aligned_cols=65 Identities=18% Similarity=0.297 Sum_probs=52.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|||.++|+|.+|+++++.|++. | ++|++.+|++++.+.+.+ .++.. ..+.+.+.++|+||.|..|
T Consensus 1 MkI~fIG~G~MG~ai~~~l~~~--~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~~v~~~Div~lavkP 67 (152)
T d1yqga2 1 MNVYFLGGGNMAAAVAGGLVKQ--GGYRIYIANRGAEKRERLEKELGVET-SATLPELHSDDVLILAVKP 67 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CSCEEEEECSSHHHHHHHHHHTCCEE-ESSCCCCCTTSEEEECSCH
T ss_pred CEEEEEcCcHHHHHHHHHHHHC--CCCcEEEEeCChhHHHHhhhhccccc-ccccccccccceEEEecCH
Confidence 7899999999999999999988 6 999999999887776654 35543 2334456789999999865
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.23 E-value=3.2e-06 Score=72.04 Aligned_cols=134 Identities=17% Similarity=0.127 Sum_probs=81.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccC--------eeeecCCc-----------cc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMG--------ITPSLKWT-----------EA 139 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~--------v~~d~~d~-----------~~ 139 (267)
-|.+||||+ +-||++++++|+++ |++|+..+|+.++.+++. ..+ +..|+.|. +.
T Consensus 5 gKvalVTGas~GIG~aia~~la~~--Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 5 EKVAIITGSSNGIGRATAVLFARE--GAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 367899996 89999999999999 999999999876654322 111 23455553 24
Q ss_pred cCCCCEEEEccCCCCCC------------ChHHHHH-----------HHH--HHhCCCCcEEEEcCCc-cccCCCCCccC
Q 024494 140 TQKFPYVIFCAPPSRSL------------DYPGDVR-----------LAA--LSWNGEGSFLFTSSSA-IYDCSDNGACD 193 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~~~~------------~~~~~~~-----------~l~--~~~~~v~r~V~~SS~~-VYg~~~~~~~~ 193 (267)
..+.|++||+|+..... +|...+. .++ +.. +..++|.++|.. .+...
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~-~~g~iI~~~S~~~~~~~~------ 155 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSS-TKGEIVNISSIASGLHAT------ 155 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCTTSSSSCC------
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccc-ccCcceeeeeeccccccC------
Confidence 56899999999854211 0111111 111 111 235666665543 22111
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 194 EDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 194 E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|.+.+.+.+.. + +..+-||.+--+
T Consensus 156 ------~~-~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~ 197 (264)
T d1spxa_ 156 ------PD-FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATG 197 (264)
T ss_dssp ------TT-SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCC
T ss_pred ------CC-chhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCc
Confidence 11 236999998888765543 2 677899988654
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=98.21 E-value=6.6e-07 Score=71.03 Aligned_cols=68 Identities=24% Similarity=0.458 Sum_probs=51.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCeee-ecCCc--cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGITP-SLKWT--EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v~~-d~~d~--~~~~~~D~Vi~~a~~~ 153 (267)
|++|+|+|+|.+|..+++.|.+. |+ +|++++++++..+...+.+... ...+. .....+|.|+.|.++.
T Consensus 1 Mk~I~IIG~G~mG~sla~~L~~~--g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~ 73 (171)
T d2g5ca2 1 MQNVLIVGVGFMGGSFAKSLRRS--GFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVR 73 (171)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhc--CCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCCch
Confidence 68899999999999999999998 64 8999999877665555444422 12222 2345799999998764
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.18 E-value=1.7e-06 Score=70.35 Aligned_cols=70 Identities=13% Similarity=0.093 Sum_probs=54.0
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----c---CeeeecCCc----cccCCCCEEEEc
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----M---GITPSLKWT----EATQKFPYVIFC 149 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~---~v~~d~~d~----~~~~~~D~Vi~~ 149 (267)
.-++|+|||+ |-||+.+++.|.++ |++|+.++|+.++..++.+ . ....|+.|. +.+.++|+|||+
T Consensus 22 ~gK~vlItGasgGIG~~ia~~la~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~ 99 (191)
T d1luaa1 22 KGKKAVVLAGTGPVGMRSAALLAGE--GAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA 99 (191)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhh--ccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeec
Confidence 3489999996 99999999999999 9999999999876544322 1 123455554 357899999999
Q ss_pred cCCCC
Q 024494 150 APPSR 154 (267)
Q Consensus 150 a~~~~ 154 (267)
++...
T Consensus 100 Ag~g~ 104 (191)
T d1luaa1 100 GAIGL 104 (191)
T ss_dssp CCTTC
T ss_pred Ccccc
Confidence 98643
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.17 E-value=1.4e-05 Score=68.03 Aligned_cols=136 Identities=14% Similarity=0.137 Sum_probs=84.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCc-----------cccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~-----------~~~~ 141 (267)
-+++||||+ +-||++++++|+++ |++|+.++|+.+. .++ +.+.+ +..|+.|+ +...
T Consensus 18 gK~~lITGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 95 (272)
T d1g0oa_ 18 GKVALVTGAGRGIGREMAMELGRR--GCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 95 (272)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence 378999996 89999999999999 9999999887543 222 22222 22345443 2456
Q ss_pred CCCEEEEccCCCCCCC--------hHHHHH-------HHH---HH-hCCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDVR-------LAA---LS-WNGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~~-~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
+.|++|+.++...... +.+.+. .+. .. ....+++++++|... ... +. + .
T Consensus 96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~--~~~--------~~-~-~ 163 (272)
T d1g0oa_ 96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAK--------AV-P-K 163 (272)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCS--------SC-S-S
T ss_pred CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc--ccc--------cc-c-c
Confidence 8999999998654321 111111 111 11 123467888876532 111 00 1 1
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYIS 233 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp 233 (267)
...|+.+|.+.+.+.+.. + +..+.|+.+-.+
T Consensus 164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~ 203 (272)
T d1g0oa_ 164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTD 203 (272)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH
T ss_pred hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCCh
Confidence 246999998888776542 3 677999988543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.17 E-value=1.4e-06 Score=66.58 Aligned_cols=65 Identities=14% Similarity=0.126 Sum_probs=50.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeee---ecCCcc-----ccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITP---SLKWTE-----ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~---d~~d~~-----~~~~~D~Vi~~a~ 151 (267)
|+|+|+|+|.+|+.|++.|.++ |++|++++.+++....+.. .+... |..|++ .+.++|+++-+..
T Consensus 1 M~IvI~G~G~~G~~la~~L~~~--g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~ 74 (132)
T d1lssa_ 1 MYIIIAGIGRVGYTLAKSLSEK--GHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTG 74 (132)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCC
Confidence 7999999999999999999999 9999999999887766543 35444 334432 3578998887643
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=6.3e-06 Score=70.28 Aligned_cols=133 Identities=14% Similarity=0.141 Sum_probs=83.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-----cCe-----eeecCCc-----------cccC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-----MGI-----TPSLKWT-----------EATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-----~~v-----~~d~~d~-----------~~~~ 141 (267)
-+++||||+ +-||++++++|.++ |++|+.++|+.++.+++.. .+. ..|..+. ....
T Consensus 14 GK~alITGassGIG~aiA~~la~~--G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 14 GKKVIVTGASKGIGREMAYHLAKM--GAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 378999996 78999999999999 9999999999876654321 111 1122221 1346
Q ss_pred CCCEEEEccCCCCCC-----C---hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL-----D---YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~-----~---~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
..|++++.++..... + +...+ +.++ +. .+.+++|++||...+-.. |
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~~~~~~~------------p 158 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSLAGKVAY------------P 158 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEGGGTSCC------------T
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccchhcCCC------------C
Confidence 789999998865321 1 11111 1111 11 134789999987754211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc---------C--eeEEeeCcccc
Q 024494 201 IGRSPRTDVLLKAEKVILEF---------G--GCVLRLAGLYI 232 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~---------~--~~IlR~~~iyG 232 (267)
. ...|+.+|.+.+.+.+.. + +..+.||.+--
T Consensus 159 ~-~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T 200 (269)
T d1xu9a_ 159 M-VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDT 200 (269)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCC
T ss_pred C-chHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCC
Confidence 1 348999998887654332 2 45688987753
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=98.12 E-value=5.5e-07 Score=70.86 Aligned_cols=67 Identities=12% Similarity=0.249 Sum_probs=53.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh-ccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI-NMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~-~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|+++++.|.+. |++|++.+|++++..++. +.++.......+..+++|+||.|..|.
T Consensus 1 MkIg~IG~G~mG~al~~~l~~~--~~~i~v~~r~~~~~~~l~~~~g~~~~~~~~~~~~~~dvIilavkp~ 68 (152)
T d2ahra2 1 MKIGIIGVGKMASAIIKGLKQT--PHELIISGSSLERSKEIAEQLALPYAMSHQDLIDQVDLVILGIKPQ 68 (152)
T ss_dssp CEEEEECCSHHHHHHHHHHTTS--SCEEEEECSSHHHHHHHHHHHTCCBCSSHHHHHHTCSEEEECSCGG
T ss_pred CEEEEEeccHHHHHHHHHHHhC--CCeEEEEcChHHhHHhhccccceeeechhhhhhhccceeeeecchH
Confidence 7899999999999999999999 999999999987776654 235544333335678899999998653
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.12 E-value=1.8e-05 Score=66.49 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=49.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhcc---Ce---eeecCCcc-----------cc--CC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINM---GI---TPSLKWTE-----------AT--QK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~---~v---~~d~~d~~-----------~~--~~ 142 (267)
++|||||+ +=||.+++++|+++ |+ .|+...|+.++..++.+. .+ ..|+.|.+ .+ .+
T Consensus 4 KtilITGassGIG~a~a~~la~~--G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKD--KNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTC--TTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence 68999996 89999999999999 85 688889998877665432 22 33555431 11 24
Q ss_pred CCEEEEccCCC
Q 024494 143 FPYVIFCAPPS 153 (267)
Q Consensus 143 ~D~Vi~~a~~~ 153 (267)
.|++|++||..
T Consensus 82 idilinnAG~~ 92 (250)
T d1yo6a1 82 LSLLINNAGVL 92 (250)
T ss_dssp CCEEEECCCCC
T ss_pred eEEEEEcCccc
Confidence 89999999964
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.09 E-value=2.7e-06 Score=69.72 Aligned_cols=67 Identities=16% Similarity=0.212 Sum_probs=50.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCe---eee----------------cCCc-cccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGI---TPS----------------LKWT-EATQKFP 144 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v---~~d----------------~~d~-~~~~~~D 144 (267)
|||.|+|+||+|..++..|.+. ||+|+++|.++++.+.+..... +.. ..|. ++..++|
T Consensus 1 MkI~ViGlG~vGl~~a~~la~~--g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d 78 (202)
T d1mv8a2 1 MRISIFGLGYVGAVCAGCLSAR--GHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (202)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEECCCHhHHHHHHHHHhC--CCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCC
Confidence 7899999999999999999999 9999999998776655542111 000 0111 3467899
Q ss_pred EEEEccCCC
Q 024494 145 YVIFCAPPS 153 (267)
Q Consensus 145 ~Vi~~a~~~ 153 (267)
+++.|.+..
T Consensus 79 ~i~i~VpTP 87 (202)
T d1mv8a2 79 VSFICVGTP 87 (202)
T ss_dssp EEEECCCCC
T ss_pred EEEEecCcc
Confidence 999999853
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.09 E-value=2.6e-06 Score=71.99 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=82.5
Q ss_pred CeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh---c-c----CeeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---N-M----GITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~---~-~----~v~~d~~d~-----------~~~~~ 142 (267)
|++||||+ | =||++++++|+++ |++|+..+|+++...... . . .+..|+.|+ +...+
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEA--GAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 77999996 5 4999999999999 999998888754332211 1 1 133455553 23568
Q ss_pred CCEEEEccCCCCC----C---C-----hHHHHH-------HHHHHhC----CCCcEEEEcCCccccCCCCCccCCCCCCC
Q 024494 143 FPYVIFCAPPSRS----L---D-----YPGDVR-------LAALSWN----GEGSFLFTSSSAIYDCSDNGACDEDSPVV 199 (267)
Q Consensus 143 ~D~Vi~~a~~~~~----~---~-----~~~~~~-------~l~~~~~----~v~r~V~~SS~~VYg~~~~~~~~E~~p~~ 199 (267)
.|++||+|+.... . + +...+. .+..... ..+++|++||.......
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~------------ 154 (256)
T d1ulua_ 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV------------ 154 (256)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC------------
T ss_pred ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC------------
Confidence 9999999986421 0 1 111111 1111111 23589999987654321
Q ss_pred CCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 200 PIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 200 p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|.+.+.+.+.. + +-.+.|+.+.-+.
T Consensus 155 ~~-~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~ 197 (256)
T d1ulua_ 155 PK-YNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197 (256)
T ss_dssp TT-CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----
T ss_pred CC-chHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeecc
Confidence 11 347999999888775543 2 6678999887654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.06 E-value=1.4e-05 Score=67.56 Aligned_cols=132 Identities=18% Similarity=0.218 Sum_probs=80.6
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chh----hhccC-----eeeecCCc-----------cccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDE----LINMG-----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~----l~~~~-----v~~d~~d~-----------~~~~~ 142 (267)
|.+||||+ +-||.+++++|+++ |++|+...++.++ .+. +...+ +..|+.|+ +...+
T Consensus 7 K~alITGas~GIG~aia~~la~~--G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRR--GASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 78999996 89999999999999 9999987665433 222 22223 34455553 24568
Q ss_pred CCEEEEccCCCCCCC--------hHHHHH-------HHH---HH-hCCCCcEEEEcCC-ccccCCCCCccCCCCCCCCCC
Q 024494 143 FPYVIFCAPPSRSLD--------YPGDVR-------LAA---LS-WNGEGSFLFTSSS-AIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 143 ~D~Vi~~a~~~~~~~--------~~~~~~-------~l~---~~-~~~v~r~V~~SS~-~VYg~~~~~~~~E~~p~~p~~ 202 (267)
.|++||+|+...... +.+.+. .+. .. ...-++++.++|. +.+.. .|.
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~------------~~~- 151 (259)
T d1ja9a_ 85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG------------IPN- 151 (259)
T ss_dssp EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS------------CCS-
T ss_pred CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC------------CCC-
Confidence 999999999654322 111111 111 11 1123466666553 33221 111
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccc
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLY 231 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iy 231 (267)
...|+.+|.+.+.+.+.. + +-.+.||.+-
T Consensus 152 ~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~ 189 (259)
T d1ja9a_ 152 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 189 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCcc
Confidence 247999998888776543 2 6779999874
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=98.06 E-value=1e-06 Score=68.97 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=51.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|+.+++.|+++ |++|++.++++.+...+...+........+...++|+||.|.++.
T Consensus 1 MkIgiIG~G~mG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~diIi~~v~~~ 67 (152)
T d1i36a2 1 LRVGFIGFGEVAQTLASRLRSR--GVEVVTSLEGRSPSTIERARTVGVTETSEEDVYSCPVVISAVTPG 67 (152)
T ss_dssp CEEEEESCSHHHHHHHHHHHHT--TCEEEECCTTCCHHHHHHHHHHTCEECCHHHHHTSSEEEECSCGG
T ss_pred CEEEEEcHHHHHHHHHHHHHHC--CCeEEEEcCchhHHHHHhhhcccccccHHHHHhhcCeEEEEecCc
Confidence 7899999999999999999999 999999998876654443333322222225678899999998754
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.99 E-value=8.7e-06 Score=64.52 Aligned_cols=67 Identities=15% Similarity=0.182 Sum_probs=51.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--------------cCCc-cccCCCCEEEEc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--------------LKWT-EATQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--------------~~d~-~~~~~~D~Vi~~ 149 (267)
|||.|+|+|.+|..++..|.++ ||+|++++|++++.+.+...+.... ..|. +.++++|+||.+
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALK--GQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CEEEEECccHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 7899999999999999999999 9999999998776655543321110 1222 457899999998
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
.+..
T Consensus 80 v~~~ 83 (184)
T d1bg6a2 80 VPAI 83 (184)
T ss_dssp SCGG
T ss_pred Echh
Confidence 7654
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.99 E-value=2.4e-06 Score=67.20 Aligned_cols=66 Identities=17% Similarity=0.200 Sum_probs=49.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-Ceeee----cCCc----cccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPS----LKWT----EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~d----~~d~----~~~~~~D~Vi~~a~~ 152 (267)
++|+|+|+|.+|+++++.|.++ ||+|++++|+.++...+... +.... ..+. +.+...|.++.+.+.
T Consensus 3 K~IliiGaG~~G~~~a~~L~~~--g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~ 77 (182)
T d1e5qa1 3 KSVLMLGSGFVTRPTLDVLTDS--GIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPY 77 (182)
T ss_dssp CEEEEECCSTTHHHHHHHHHTT--TCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHhC--CCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccc
Confidence 7899999999999999999999 99999999998887766532 11111 1111 245678888876643
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.99 E-value=3e-06 Score=64.49 Aligned_cols=66 Identities=12% Similarity=0.329 Sum_probs=52.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec---CCcc-----ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWTE-----ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~---~d~~-----~~~~~D~Vi~~a~~ 152 (267)
|+++|+|+|.+|+.+++.|.++ |++|++++.+++....+...+..... .+++ .+.++|.||.+.+.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~--g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~ 74 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRM--GHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGA 74 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCc
Confidence 5789999999999999999999 99999999999888777665554433 3332 35688998877654
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.98 E-value=6.8e-05 Score=62.53 Aligned_cols=137 Identities=12% Similarity=0.056 Sum_probs=85.3
Q ss_pred CCCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-c--C---eeeecCCc-----------cccCCCC
Q 024494 83 GENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-M--G---ITPSLKWT-----------EATQKFP 144 (267)
Q Consensus 83 ~m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~--~---v~~d~~d~-----------~~~~~~D 144 (267)
.-+.+||||+ +-||.+++++|.++ |++|+.++|+.++.+.+.+ . . ...+..+. ......|
T Consensus 4 kGKvalITGas~GIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQ--GASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 81 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence 4477899996 88999999999999 9999999999887654432 1 1 12222221 1345678
Q ss_pred EEEEccCCCCCC------C--------hHHHHH-------HHH---H-H--h------CCCCcEEEEcCCccccCCCCCc
Q 024494 145 YVIFCAPPSRSL------D--------YPGDVR-------LAA---L-S--W------NGEGSFLFTSSSAIYDCSDNGA 191 (267)
Q Consensus 145 ~Vi~~a~~~~~~------~--------~~~~~~-------~l~---~-~--~------~~v~r~V~~SS~~VYg~~~~~~ 191 (267)
.+++.+...... + +.+.+. .+. . . . .+..++|++||...+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~---- 157 (248)
T d2o23a1 82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ---- 157 (248)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC----
T ss_pred ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC----
Confidence 888776543211 0 111110 111 1 0 0 123479999998765321
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 192 CDEDSPVVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 192 ~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
|. ...|+.+|.+.+.+.+.+ + +..+-||.+.-+.
T Consensus 158 --------~~-~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~ 200 (248)
T d2o23a1 158 --------VG-QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPL 200 (248)
T ss_dssp --------TT-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-
T ss_pred --------CC-chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecch
Confidence 11 247999999998876653 2 6778899887654
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.98 E-value=2.3e-05 Score=65.66 Aligned_cols=136 Identities=11% Similarity=0.063 Sum_probs=83.8
Q ss_pred CCeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc----cC----eeeecCCc-----------cccC
Q 024494 84 ENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN----MG----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~----~~----v~~d~~d~-----------~~~~ 141 (267)
-|++||||+ | =||+++++.|+++ |++|+..+|+++......+ .+ ...+..+. +...
T Consensus 5 gK~~lITGass~~GIG~aiA~~l~~~--G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 5 GKRILVTGVASKLSIAYGIAQAMHRE--GAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCchhHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 378999986 5 5899999999999 9999999998654432211 11 11122221 2456
Q ss_pred CCCEEEEccCCCCCCC---------hHHHHHH-----------HHHHh----CCCCcEEEEcCCccccCCCCCccCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD---------YPGDVRL-----------AALSW----NGEGSFLFTSSSAIYDCSDNGACDEDSP 197 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~---------~~~~~~~-----------l~~~~----~~v~r~V~~SS~~VYg~~~~~~~~E~~p 197 (267)
..|.+||+++...... ..+.... +.... ...+.+|++||.+....
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~----------- 151 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA----------- 151 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----------
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccC-----------
Confidence 7899999987653211 0111110 10111 12346888888664221
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 198 VVPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 198 ~~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
.|. ...|+.+|.+.|.+.+.. + +..+.|+.+..+.
T Consensus 152 -~~~-~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~ 195 (258)
T d1qsga_ 152 -IPN-YNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLA 195 (258)
T ss_dssp -CTT-TTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTT
T ss_pred -CCC-cHHHHHHHHHHHHHHHHHHHHhCccCceeeccccccccccc
Confidence 111 357999999999876653 2 6779999997665
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.94 E-value=9e-06 Score=64.97 Aligned_cols=68 Identities=15% Similarity=0.229 Sum_probs=53.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee----e---cCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP----S---LKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~----d---~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
+.+|.|+|.|.+|..+++.|++. ||+|++++|++++.+++...+... . ..+. +....+|.++.+....
T Consensus 2 ~~nIg~IGlG~MG~~mA~~L~~~--G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~ 77 (176)
T d2pgda2 2 QADIALIGLAVMGQNLILNMNDH--GFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG 77 (176)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred CCcEEEEeEhHHHHHHHHHHHHC--CCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCch
Confidence 36899999999999999999999 999999999998887775443321 1 1111 4678899999987654
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.91 E-value=4.9e-05 Score=65.21 Aligned_cols=131 Identities=12% Similarity=0.074 Sum_probs=79.3
Q ss_pred EEEEcc-cHHhHHHHHHHHhcCCCCeEEEE---eCCCCCchhhh-------ccC-----eeeecCCcc---------ccC
Q 024494 87 LLIVGP-GVLGRLVAEQWRQEHPGCQIYGQ---TMTADHHDELI-------NMG-----ITPSLKWTE---------ATQ 141 (267)
Q Consensus 87 ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l---~R~~~~~~~l~-------~~~-----v~~d~~d~~---------~~~ 141 (267)
|||||+ +=||++++++|.++ |.+|+.+ .|+.+....+. ..+ +.+|+.|++ ...
T Consensus 5 vlITGassGIG~a~A~~la~~--Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 5 VLITGCSSGIGLHLAVRLASD--PSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (285)
T ss_dssp EEESCCSSHHHHHHHHHHHTC--TTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred EEEccCCCHHHHHHHHHHHHC--CCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence 578896 89999999999999 9875544 44433332221 111 234555541 125
Q ss_pred CCCEEEEccCCCCCCC--------hHHHH-----------HHHH--HHhCCCCcEEEEcCCccccCCCCCccCCCCCCCC
Q 024494 142 KFPYVIFCAPPSRSLD--------YPGDV-----------RLAA--LSWNGEGSFLFTSSSAIYDCSDNGACDEDSPVVP 200 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~~--------~~~~~-----------~~l~--~~~~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p 200 (267)
..|+++++++...... +...+ +.++ +...+.+++|++||....-.. |
T Consensus 83 ~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~------------~ 150 (285)
T d1jtva_ 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL------------P 150 (285)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC------------T
T ss_pred chhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC------------C
Confidence 6899999998654321 11111 1111 122356899999997654211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCcccc
Q 024494 201 IGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYI 232 (267)
Q Consensus 201 ~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyG 232 (267)
. ...|+.+|.+.+.+.+.. + +..+.||.+--
T Consensus 151 ~-~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T 190 (285)
T d1jtva_ 151 F-NDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHT 190 (285)
T ss_dssp T-CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred C-chHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCC
Confidence 1 247999998887665432 3 78889998753
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.87 E-value=2.5e-06 Score=69.55 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=51.1
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC--------eee----e-cCCc-cccCCCCEEE
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG--------ITP----S-LKWT-EATQKFPYVI 147 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~--------v~~----d-~~d~-~~~~~~D~Vi 147 (267)
..|+||.|+|+|..|.+++..|.++ ||+|+.++|+++..+.+...+ +.. . ..|. +++.++|+||
T Consensus 5 ~~m~KI~ViGaG~wGtAlA~~La~~--g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~ii 82 (189)
T d1n1ea2 5 LYLNKAVVFGSGAFGTALAMVLSKK--CREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIIL 82 (189)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHTT--EEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEE
T ss_pred ceeceEEEECCCHHHHHHHHHHHHc--CCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEE
Confidence 3457899999999999999999999 999999999877665443222 111 0 1222 4678999999
Q ss_pred EccCC
Q 024494 148 FCAPP 152 (267)
Q Consensus 148 ~~a~~ 152 (267)
.+.+.
T Consensus 83 iavPs 87 (189)
T d1n1ea2 83 FVIPT 87 (189)
T ss_dssp ECSCH
T ss_pred EcCcH
Confidence 98864
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.87 E-value=5.1e-05 Score=59.06 Aligned_cols=69 Identities=16% Similarity=0.152 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhc----cC-eeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN----MG-ITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~----~~-v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
.|||.|+|+|.+|..++..|..+ | .||..+|+++++... +.. .. ......|.+.+.++|+||.+++.
T Consensus 5 ~~KI~IIGaG~VG~~~A~~l~~~--~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~~~~~adivvitag~ 82 (146)
T d1ez4a1 5 HQKVVLVGDGAVGSSYAFAMAQQ--GIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGA 82 (146)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGGGGTTCSEEEECCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhc--CCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHHHhccccEEEEeccc
Confidence 37999999999999999999998 6 599999998754322 111 01 11123455678999999999986
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 83 ~~ 84 (146)
T d1ez4a1 83 PQ 84 (146)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.83 E-value=3e-05 Score=61.23 Aligned_cols=70 Identities=19% Similarity=0.289 Sum_probs=53.9
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc-cCeeee-cCCc-cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPS-LKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~-~~v~~d-~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
..++|||+|+|-+|+.+++.|.+. |. +|++..|+.++...+.. .+.... +.+. +.+.++|+||.|.+...
T Consensus 23 ~~~~ilviGaG~~g~~v~~~L~~~--g~~~i~v~nRt~~ka~~l~~~~~~~~~~~~~~~~~l~~~Divi~atss~~ 96 (159)
T d1gpja2 23 HDKTVLVVGAGEMGKTVAKSLVDR--GVRAVLVANRTYERAVELARDLGGEAVRFDELVDHLARSDVVVSATAAPH 96 (159)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHHHTCEECCGGGHHHHHHTCSEEEECCSSSS
T ss_pred ccCeEEEECCCHHHHHHHHHHHhc--CCcEEEEEcCcHHHHHHHHHhhhcccccchhHHHHhccCCEEEEecCCCC
Confidence 458999999999999999999999 87 69999999877765543 343332 2332 46779999999988654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.82 E-value=5.5e-05 Score=63.86 Aligned_cols=136 Identities=8% Similarity=-0.050 Sum_probs=81.7
Q ss_pred CCeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh---ccC-----eeeecCCc-----------cccC
Q 024494 84 ENDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NMG-----ITPSLKWT-----------EATQ 141 (267)
Q Consensus 84 m~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~---~~~-----v~~d~~d~-----------~~~~ 141 (267)
-|++||||+ | -||.+++++|+++ |++|+..+|+++..+... ..+ ...++.+. +.+.
T Consensus 5 gK~alITGaag~~GIG~AiA~~la~~--Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 5 GKKGLIVGVANNKSIAYGIAQSCFNQ--GATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTT--TCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 378999995 6 5999999999999 999999999865332221 111 12233322 2457
Q ss_pred CCCEEEEccCCCCCC----C----hHHHHH-----------HHHH---HhCC-CCcEEEEcCCccccCCCCCccCCCCCC
Q 024494 142 KFPYVIFCAPPSRSL----D----YPGDVR-----------LAAL---SWNG-EGSFLFTSSSAIYDCSDNGACDEDSPV 198 (267)
Q Consensus 142 ~~D~Vi~~a~~~~~~----~----~~~~~~-----------~l~~---~~~~-v~r~V~~SS~~VYg~~~~~~~~E~~p~ 198 (267)
..|++|++++..... + ...... .... ...+ ...++..|+.+..+..
T Consensus 83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~----------- 151 (274)
T d2pd4a1 83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM----------- 151 (274)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC-----------
T ss_pred CCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccccccc-----------
Confidence 899999999865321 1 111111 0001 1112 2346666665544321
Q ss_pred CCCCCCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 199 VPIGRSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 199 ~p~~~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
+. ...|+.+|...+.+.+.. + +..+.|+.+.-+.
T Consensus 152 -~~-~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~ 194 (274)
T d2pd4a1 152 -AH-YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLA 194 (274)
T ss_dssp -TT-CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred -cc-chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcc
Confidence 11 247888998888776543 2 6778999887654
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.79 E-value=3.2e-05 Score=59.88 Aligned_cols=39 Identities=28% Similarity=0.256 Sum_probs=35.0
Q ss_pred CCCeEEEEc-ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch
Q 024494 83 GENDLLIVG-PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (267)
Q Consensus 83 ~m~~ILV~G-aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~ 123 (267)
.|+||.|+| .|.+|+.+++.|.++ ||+|.+++|++....
T Consensus 8 ~~~kI~iIGg~G~mG~~la~~L~~~--G~~V~~~d~~~~~~~ 47 (152)
T d2pv7a2 8 DIHKIVIVGGYGKLGGLFARYLRAS--GYPISILDREDWAVA 47 (152)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTT--TCCEEEECTTCGGGH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHHc--CCCcEeccccccccc
Confidence 468999999 799999999999999 999999999876543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.76 E-value=0.00011 Score=60.29 Aligned_cols=132 Identities=16% Similarity=0.125 Sum_probs=78.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc----------cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT----------EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~----------~~~~~~D~Vi~~a~~~ 153 (267)
|++||||+ +-||++++++|.++ |++|+.++|+++..+.. ....|+.+. ......+.++..++..
T Consensus 2 K~alITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKAR--GYRVVVLDLRREGEDLI---YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVG 76 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCEEEEEESSCCSSSSE---EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCcccccce---EeeccccchhhhHHHHHhhhccccccchhhhhhcc
Confidence 67999996 88999999999999 99999999987654322 122332221 1223344444444322
Q ss_pred CCC---------C---hHHH-----------HHHHHHH--h------CCCCcEEEEcCCccccCCCCCccCCCCCCCCCC
Q 024494 154 RSL---------D---YPGD-----------VRLAALS--W------NGEGSFLFTSSSAIYDCSDNGACDEDSPVVPIG 202 (267)
Q Consensus 154 ~~~---------~---~~~~-----------~~~l~~~--~------~~v~r~V~~SS~~VYg~~~~~~~~E~~p~~p~~ 202 (267)
... . +.+. .+..... . .+..++|++||...+-.. |.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~------------~~- 143 (241)
T d1uaya_ 77 LAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ------------IG- 143 (241)
T ss_dssp CCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC------------TT-
T ss_pred ccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC------------CC-
Confidence 110 0 1110 0111111 0 134589999998765321 11
Q ss_pred CCHHHHHHHHHHHHHHHc-------C--eeEEeeCccccCC
Q 024494 203 RSPRTDVLLKAEKVILEF-------G--GCVLRLAGLYISL 234 (267)
Q Consensus 203 ~~~y~~~k~~aE~~l~~~-------~--~~IlR~~~iyGp~ 234 (267)
...|+.+|.+.+.+.+.. + +..+-|+.+.-+.
T Consensus 144 ~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~ 184 (241)
T d1uaya_ 144 QAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPL 184 (241)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccc
Confidence 247999999888776543 3 6778999886553
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.76 E-value=0.00012 Score=61.62 Aligned_cols=134 Identities=10% Similarity=-0.069 Sum_probs=81.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHh---cCCCCeEEEEeCCCCCchhhhc------cC-----eeeecCCcc----------c
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQ---EHPGCQIYGQTMTADHHDELIN------MG-----ITPSLKWTE----------A 139 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~---~~pG~~V~~l~R~~~~~~~l~~------~~-----v~~d~~d~~----------~ 139 (267)
+.++|||+ +-||++++++|.+ + |++|+.++|++++.+++.+ .+ +.+|+.|++ .
T Consensus 7 KvalITGas~GIG~aiA~~lA~~~~~--G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 7 AVCVLTGASRGFGRALAPQLARLLSP--GSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCT--TCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHhcccC--CCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 45678896 7899999999975 6 9999999998876544321 12 334555531 1
Q ss_pred -----cCCCCEEEEccCCCCC---C---C-----hHHHHH-------HHH---HHh---CC--CCcEEEEcCCccccCCC
Q 024494 140 -----TQKFPYVIFCAPPSRS---L---D-----YPGDVR-------LAA---LSW---NG--EGSFLFTSSSAIYDCSD 188 (267)
Q Consensus 140 -----~~~~D~Vi~~a~~~~~---~---~-----~~~~~~-------~l~---~~~---~~--v~r~V~~SS~~VYg~~~ 188 (267)
....|++++.|+.... . + +...+. .+. ... .+ ..++|++||...+...
T Consensus 85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~- 163 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY- 163 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC-
T ss_pred hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC-
Confidence 1246788998875321 1 1 111111 111 111 12 3589999997654221
Q ss_pred CCccCCCCCCCCCCCCHHHHHHHHHHHHHHHc-----C--eeEEeeCccccC
Q 024494 189 NGACDEDSPVVPIGRSPRTDVLLKAEKVILEF-----G--GCVLRLAGLYIS 233 (267)
Q Consensus 189 ~~~~~E~~p~~p~~~~~y~~~k~~aE~~l~~~-----~--~~IlR~~~iyGp 233 (267)
|. ...|+.+|...+.+.+.+ + +..+-|+.+-.+
T Consensus 164 -----------~~-~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 164 -----------KG-WGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp -----------TT-CHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred -----------cc-chHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 11 347999998888765543 2 677888888655
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.72 E-value=2.7e-05 Score=62.89 Aligned_cols=65 Identities=18% Similarity=0.306 Sum_probs=46.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee-------------------ecCCccccCCCCE
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP-------------------SLKWTEATQKFPY 145 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~-------------------d~~d~~~~~~~D~ 145 (267)
|||.|+|.||+|..++..| ++ |++|+++|-++++...+.. +..+ ...+.....++|+
T Consensus 1 MkI~ViGlG~vGl~~a~~~-a~--g~~V~g~Din~~~v~~l~~-g~~p~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~i 76 (196)
T d1dlja2 1 MKIAVAGSGYVGLSLGVLL-SL--QNEVTIVDILPSKVDKINN-GLSPIQDEYIEYYLKSKQLSIKATLDSKAAYKEAEL 76 (196)
T ss_dssp CEEEEECCSHHHHHHHHHH-TT--TSEEEEECSCHHHHHHHHT-TCCSSCCHHHHHHHHHSCCCEEEESCHHHHHHHCSE
T ss_pred CEEEEECCChhHHHHHHHH-HC--CCcEEEEECCHHHHHHHhh-cccccchhhHHHHhhhhhhhhhccchhhhhhhcccc
Confidence 7899999999999998655 67 9999999998776655542 2111 0111123567999
Q ss_pred EEEccCCC
Q 024494 146 VIFCAPPS 153 (267)
Q Consensus 146 Vi~~a~~~ 153 (267)
++.|.+..
T Consensus 77 i~v~vpt~ 84 (196)
T d1dlja2 77 VIIATPTN 84 (196)
T ss_dssp EEECCCCC
T ss_pred ccccCCcc
Confidence 99998754
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.72 E-value=8.9e-05 Score=62.13 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=48.2
Q ss_pred CCeEEEEcc-cH--HhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhhc-cC-----eeeecCCc--------------cc
Q 024494 84 ENDLLIVGP-GV--LGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-MG-----ITPSLKWT--------------EA 139 (267)
Q Consensus 84 m~~ILV~Ga-G~--IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~~-~~-----v~~d~~d~--------------~~ 139 (267)
-|++||||+ |- ||++++++|.++ |++|+.++|+.++. +.+.+ .+ +.+|+.+. ..
T Consensus 6 gK~~lItGaag~~GIG~aiA~~la~~--Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~ 83 (268)
T d2h7ma1 6 GKRILVSGIITDSSIAFHIARVAQEQ--GAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 83 (268)
T ss_dssp TCEEEECCCSSTTCHHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHc--CCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence 378999995 64 999999999999 99999999987654 22221 11 23455432 12
Q ss_pred cCCCCEEEEccCCC
Q 024494 140 TQKFPYVIFCAPPS 153 (267)
Q Consensus 140 ~~~~D~Vi~~a~~~ 153 (267)
....|+++|+++..
T Consensus 84 ~~~ld~~i~~ag~~ 97 (268)
T d2h7ma1 84 GNKLDGVVHSIGFM 97 (268)
T ss_dssp TCCEEEEEECCCCC
T ss_pred CCCcceeeeccccc
Confidence 35679999999864
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.70 E-value=9.6e-06 Score=63.72 Aligned_cols=39 Identities=18% Similarity=0.256 Sum_probs=34.8
Q ss_pred CeEEEE-cccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh
Q 024494 85 NDLLIV-GPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL 125 (267)
Q Consensus 85 ~~ILV~-GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l 125 (267)
|||.|+ |+|-+|++|++.|.++ ||+|+..+|++++.+.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~--G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATL--GHEIVVGSRREEKAEAK 40 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTT--TCEEEEEESSHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence 789998 6899999999999999 99999999998776544
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.66 E-value=0.00036 Score=53.53 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=50.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhh----c------cCeeee-cCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELI----N------MGITPS-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~----~------~~v~~d-~~d~~~~~~~D~Vi~~a~ 151 (267)
|||.|+|+|.+|+.++..|..+ + .|+..+|.++++..... . ...... ..|.+++.++|+|+.+++
T Consensus 1 mKI~IIGaG~VG~~la~~l~~~--~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~~~~~dadvvvitag 78 (142)
T d1guza1 1 MKITVIGAGNVGATTAFRLAEK--QLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYADTANSDIVIITAG 78 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGGGTTCSEEEECCS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCHHHhcCCeEEEEEEe
Confidence 7899999999999999999988 6 59999999887543211 0 011111 244568899999999999
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 79 ~~~ 81 (142)
T d1guza1 79 LPR 81 (142)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=5.7e-05 Score=58.83 Aligned_cols=69 Identities=10% Similarity=0.081 Sum_probs=45.0
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcC--CCCeEEEEeCCCCCchhhh--ccC-eeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEH--PGCQIYGQTMTADHHDELI--NMG-ITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~--pG~~V~~l~R~~~~~~~l~--~~~-v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
|+||.|+|+ |++|+.+++.|++++ |-.+++.+.++........ ... ...+..+.+.+.++|++|.|++.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~~~~DivF~a~~~ 75 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEALKALDIIVTCQGG 75 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHHHTCSEEEECSCH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhhhcCcEEEEecCc
Confidence 789999997 999999999888752 3457777776543322111 111 11223344467899999999854
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.58 E-value=0.00025 Score=55.00 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=50.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhc------cCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LIN------MGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~------~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
.||.|+|+|.+|+.++..|..+ +. |+..+|+++++... +.. ..+.....|.+.+.++|+||.+++.
T Consensus 7 ~KI~IiGaG~vG~~~a~~l~~~--~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~l~daDvvvitag~ 84 (148)
T d1ldna1 7 ARVVVIGAGFVGASYVFALMNQ--GIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDDCRDADLVVICAGA 84 (148)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGGTTTCSEEEECCSC
T ss_pred CeEEEECcCHHHHHHHHHHHhc--CCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHHhccceeEEEeccc
Confidence 6899999999999999999998 64 89999998765321 111 1112223455788999999999996
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 85 ~~ 86 (148)
T d1ldna1 85 NQ 86 (148)
T ss_dssp CC
T ss_pred cc
Confidence 54
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.57 E-value=0.00014 Score=58.89 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=33.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
.+||.|+|+|.+|+.++..++.. ||+|+.++++++..
T Consensus 4 IkkvaViGaG~mG~~iA~~~a~~--G~~V~l~D~~~~~l 40 (192)
T d1f0ya2 4 VKHVTVIGGGLMGAGIAQVAAAT--GHTVVLVDQTEDIL 40 (192)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHH
T ss_pred eEEEEEECcCHHHHHHHHHHHhC--CCcEEEEECChHHH
Confidence 47999999999999999999999 99999999987643
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.56 E-value=0.00028 Score=54.21 Aligned_cols=69 Identities=14% Similarity=0.012 Sum_probs=49.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchhhh----c-----cCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDELI----N-----MGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~l~----~-----~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+|.+|+.++..|..+ + -|+..+|.++++..... . ........|.+.++++|+|+.+++..
T Consensus 1 mKI~IIGaG~VG~~~a~~l~~~--~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~ 78 (140)
T d1a5za1 1 MKIGIVGLGRVGSSTAFALLMK--GFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYADLKGSDVVIVAAGVP 78 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGGGTTCSEEEECCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCCEEEEEecccccccchhccccccccccccccccCCcHHHhcCCCEEEEecccc
Confidence 7999999999999999999888 6 48999998865442211 0 01111223446789999999999975
Q ss_pred CC
Q 024494 154 RS 155 (267)
Q Consensus 154 ~~ 155 (267)
+.
T Consensus 79 ~~ 80 (140)
T d1a5za1 79 QK 80 (140)
T ss_dssp CC
T ss_pred cC
Confidence 53
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.55 E-value=0.0002 Score=59.45 Aligned_cols=72 Identities=15% Similarity=0.215 Sum_probs=47.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhhc-cCeeeecCC--ccccCCCCEEEEccCCCCCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELIN-MGITPSLKW--TEATQKFPYVIFCAPPSRSLD 157 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~~-~~v~~d~~d--~~~~~~~D~Vi~~a~~~~~~~ 157 (267)
||-|||||+ +-||++++++|.++ |++|++++|+.++. .++.. .+......+ .+.....|+++++|+.....+
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~--Ga~V~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~~ 77 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAA--GHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK 77 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESSSSSEECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECChHHHHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcHH
Confidence 577899996 88999999999999 99999999976432 11110 000000001 123456899999998765443
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.48 E-value=0.00083 Score=52.76 Aligned_cols=70 Identities=17% Similarity=0.074 Sum_probs=51.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc----C--eeeecCCccccCCCCEEEEcc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM----G--ITPSLKWTEATQKFPYVIFCA 150 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~----~--v~~d~~d~~~~~~~D~Vi~~a 150 (267)
+.+||.|+|+|.+|+.++-.|..+ |. |+..+|++++.... +... + ......|.+.+.++|+|+.+|
T Consensus 19 ~~~KV~IIGaG~VG~~~A~~l~~~--~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~~~~adiVVitA 96 (160)
T d1i0za1 19 PNNKITVVGVGQVGMACAISILGK--SLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVTA 96 (160)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGGGTTCSEEEECC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhc--CCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhhcccccEEEEec
Confidence 447999999999999999999999 76 89999987655422 1110 1 111124456789999999999
Q ss_pred CCCC
Q 024494 151 PPSR 154 (267)
Q Consensus 151 ~~~~ 154 (267)
+..+
T Consensus 97 g~~~ 100 (160)
T d1i0za1 97 GVRQ 100 (160)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 9654
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.48 E-value=0.00039 Score=53.58 Aligned_cols=69 Identities=16% Similarity=0.000 Sum_probs=50.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhc----cCe--eee-cCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN----MGI--TPS-LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~----~~v--~~d-~~d~~~~~~~D~Vi~~a~ 151 (267)
|||.|+|+|.+|..++-.|..+ + -|+..++.+++.... +.. ... ... -.|.+.+.++|+|+.+++
T Consensus 1 MKI~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~~~~adiVvitag 78 (142)
T d1ojua1 1 MKLGFVGAGRVGSTSAFTCLLN--LDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSLLKGSEIIVVTAG 78 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--SCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGGGTTCSEEEECCC
T ss_pred CEEEEECcCHHHHHHHHHHHhc--CcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHHhccccEEEEecc
Confidence 7999999999999999999988 6 389999988765322 111 111 111 235578999999999998
Q ss_pred CCCC
Q 024494 152 PSRS 155 (267)
Q Consensus 152 ~~~~ 155 (267)
..+.
T Consensus 79 ~~~~ 82 (142)
T d1ojua1 79 LARK 82 (142)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 6543
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=0.00014 Score=51.81 Aligned_cols=68 Identities=12% Similarity=0.097 Sum_probs=49.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc--hhhhccCeeeecC--CccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH--DELINMGITPSLK--WTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~--~~l~~~~v~~d~~--d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|.|-.|+.+++.|.++ |++|++.+.+.... ..+ ..++..... +...+.++|.||...|...
T Consensus 5 ~K~v~ViGlG~sG~s~a~~L~~~--g~~v~~~D~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vi~SPGi~~ 76 (93)
T d2jfga1 5 GKNVVIIGLGLTGLSCVDFFLAR--GVTPRVMDTRMTPPGLDKL-PEAVERHTGSLNDEWLMAADLIVASPGIAL 76 (93)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHT--TCCCEEEESSSSCTTGGGS-CTTSCEEESBCCHHHHHHCSEEEECTTSCT
T ss_pred CCEEEEEeECHHHHHHHHHHHHC--CCEEEEeeCCcCchhHHHH-hhccceeecccchhhhccCCEEEECCCCCC
Confidence 37899999999999999999999 99999999865422 222 223333322 2335678999999888654
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=97.47 E-value=2.3e-05 Score=62.34 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=49.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-------cCCc----cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-------LKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-------~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|.|.+|..++++|++. ||+|++.+|++++...+.+.+.... ..+. ..+...+.++.+..+.
T Consensus 2 MkIGvIGlG~MG~~ma~~L~~~--G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (178)
T d1pgja2 2 MDVGVVGLGVMGANLALNIAEK--GFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG 79 (178)
T ss_dssp BSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred CEEEEEeehHHHHHHHHHHHHC--CCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCc
Confidence 7899999999999999999999 9999999999888776654332110 1111 2456677777776543
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.45 E-value=0.00062 Score=52.33 Aligned_cols=68 Identities=10% Similarity=0.051 Sum_probs=46.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhh----hcc-----CeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDEL----INM-----GITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l----~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.+|+.++-.|..+ +. |+..+|++++..... ... .......+.+.+.++|+|+.+++..
T Consensus 2 ~KI~IIGaG~VG~~~a~~l~~~--~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~ 79 (142)
T d1y6ja1 2 SKVAIIGAGFVGASAAFTMALR--QTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN 79 (142)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred CeEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccc
Confidence 6899999999999999999988 64 899999887654321 110 0111123456789999999999965
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
.
T Consensus 80 ~ 80 (142)
T d1y6ja1 80 R 80 (142)
T ss_dssp -
T ss_pred c
Confidence 4
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.44 E-value=5.7e-05 Score=60.48 Aligned_cols=67 Identities=10% Similarity=0.059 Sum_probs=47.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC--chhhhccCee-----------eec-CCc-cccCCCCEEEEc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH--HDELINMGIT-----------PSL-KWT-EATQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~--~~~l~~~~v~-----------~d~-~d~-~~~~~~D~Vi~~ 149 (267)
|||.|+|+|..|.+++..|.++ |++|+.+.|..+. ...+...... ... .|. +++.++|+||.+
T Consensus 1 MkI~ViGaG~~GtalA~~la~~--g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~a 78 (180)
T d1txga2 1 MIVSILGAGAMGSALSVPLVDN--GNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLG 78 (180)
T ss_dssp CEEEEESCCHHHHHHHHHHHHH--CCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhcc
Confidence 7999999999999999999999 9999999985332 2222211110 011 122 467899999998
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
.+..
T Consensus 79 vps~ 82 (180)
T d1txga2 79 VSTD 82 (180)
T ss_dssp SCGG
T ss_pred cchh
Confidence 8754
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.40 E-value=0.00017 Score=55.71 Aligned_cols=69 Identities=10% Similarity=0.089 Sum_probs=44.7
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHh-cCCCCeEEEEeCCCCCchhhhccCeeeecC--CccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQ-EHPGCQIYGQTMTADHHDELINMGITPSLK--WTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~-~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~--d~~~~~~~D~Vi~~a~~ 152 (267)
.|+|.|+|+ |++|+.|++.|.+ ++|..++..+..+......+...+-+.... +.+...++|++|.+++.
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~~~~~~~d~vf~a~p~ 74 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDFSSVGLAFFAAAA 74 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGGCCGGGCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchhhhhccceEEEecCCc
Confidence 389999997 9999999999975 456778887765433322222111122221 22456789999988754
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.38 E-value=0.00092 Score=51.27 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=49.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhh----c------cCeeee-cCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELI----N------MGITPS-LKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~----~------~~v~~d-~~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|+|+|.+|..++-.|..+ +. ++..++.+++...... . ...... ..|.+.+.++|+||.+|+.
T Consensus 2 ~KI~IIGaG~VG~~~A~~l~~~--~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~~~~advvvitag~ 79 (142)
T d1uxja1 2 KKISIIGAGFVGSTTAHWLAAK--ELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGA 79 (142)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHHhcCCCEEEEeeec
Confidence 6899999999999999999888 64 8999998876543211 0 011111 2455678999999999996
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
..
T Consensus 80 ~~ 81 (142)
T d1uxja1 80 PR 81 (142)
T ss_dssp C-
T ss_pred cC
Confidence 54
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=97.34 E-value=2.2e-05 Score=60.83 Aligned_cols=65 Identities=18% Similarity=0.129 Sum_probs=43.3
Q ss_pred EEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 87 LLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 87 ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|-++|+|.+|+++++.|.+. ++.+.+.+|++++...+.+.+........+....+|+||.|.++.
T Consensus 2 IgfIG~G~mg~~l~~~L~~~--~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~d~ 66 (153)
T d2i76a2 2 LNFVGTGTLTRFFLECLKDR--YEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVPDR 66 (153)
T ss_dssp CEEESCCHHHHHHHHTTC------CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSCTT
T ss_pred EEEEeCcHHHHHHHHHHHhC--CCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEeccch
Confidence 56889999999999988665 555568899988887776544433233345678899999998653
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.33 E-value=0.00076 Score=52.07 Aligned_cols=69 Identities=13% Similarity=0.098 Sum_probs=48.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC--CeEEEEeCCCCC--ch----hhhc------cCeeeec---CCccccCCCCEE
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG--CQIYGQTMTADH--HD----ELIN------MGITPSL---KWTEATQKFPYV 146 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG--~~V~~l~R~~~~--~~----~l~~------~~v~~d~---~d~~~~~~~D~V 146 (267)
|||.|+|+ |.+|+.++..|..+ + .|+..++++++. .+ ++.. ...+... .|.+.++++|+|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~--~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvV 78 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKE--PFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVV 78 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTC--TTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChHHHHHHHHHHhC--CcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEE
Confidence 78999996 99999999999988 7 499999987532 11 1111 0112111 244678999999
Q ss_pred EEccCCCCC
Q 024494 147 IFCAPPSRS 155 (267)
Q Consensus 147 i~~a~~~~~ 155 (267)
|.+||..+.
T Consensus 79 VitAG~~~~ 87 (145)
T d1hyea1 79 IITSGVPRK 87 (145)
T ss_dssp EECCSCCCC
T ss_pred EEecccccC
Confidence 999996543
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.32 E-value=0.0011 Score=50.97 Aligned_cols=69 Identities=17% Similarity=0.266 Sum_probs=50.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc-----Ceeee-cCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM-----GITPS-LKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~-----~v~~d-~~d~~~~~~~D~Vi~~a~~ 152 (267)
.||.|+|+|.+|.+++..|..+ +. |+..+++++++... +... ..... -.+.+.+.++|+||.+++.
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~--~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~~~~daDvVVitaG~ 79 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQR--GIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGP 79 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGGGGTTCSEEEECCCC
T ss_pred CEEEEECCCHHHHHHHHHHHhc--CCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHHHhhCCcEEEEeccc
Confidence 5899999999999999999988 64 89999988755422 1110 11111 2344678899999999997
Q ss_pred CCC
Q 024494 153 SRS 155 (267)
Q Consensus 153 ~~~ 155 (267)
.+.
T Consensus 80 ~~~ 82 (143)
T d1llda1 80 RQK 82 (143)
T ss_dssp CCC
T ss_pred ccC
Confidence 653
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=8.4e-05 Score=63.08 Aligned_cols=69 Identities=7% Similarity=-0.013 Sum_probs=49.5
Q ss_pred CeE-EEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhh----hccC-----eeeecCCc-----------cccCC
Q 024494 85 NDL-LIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDEL----INMG-----ITPSLKWT-----------EATQK 142 (267)
Q Consensus 85 ~~I-LV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l----~~~~-----v~~d~~d~-----------~~~~~ 142 (267)
|+| ||||+ +=||+.++++|.++. |++|+..+|+.++.++. ...+ +.+|+.|. +...+
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~-g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLF-SGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHS-SSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 566 78896 899999999998742 78999999997765432 2222 23455553 23468
Q ss_pred CCEEEEccCCCC
Q 024494 143 FPYVIFCAPPSR 154 (267)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (267)
.|++||.||...
T Consensus 82 iDiLVnNAGi~~ 93 (275)
T d1wmaa1 82 LDVLVNNAGIAF 93 (275)
T ss_dssp EEEEEECCCCCC
T ss_pred cEEEEEcCCcCC
Confidence 999999999653
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.29 E-value=0.00023 Score=55.29 Aligned_cols=69 Identities=16% Similarity=0.115 Sum_probs=42.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhc--CCCCeEEEEeCCCCC--chhhhc-cCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQE--HPGCQIYGQTMTADH--HDELIN-MGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~--~pG~~V~~l~R~~~~--~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|+|+ ||+|+.|++.|+++ +|..++..++.+... ...+.. ........+.+.+.++|+||.|++..
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~~~~~~~DvvF~alp~~ 75 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIESLKQLDAVITCQGGS 75 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCHHHHTTCSEEEECSCHH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccchhhhccccEEEEecCch
Confidence 68999996 99999999998864 334566666543222 111110 01111223445678999999998643
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.28 E-value=0.0002 Score=56.17 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=52.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec---CCc----cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL---KWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~---~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.+|+|+|+|-+|...++.++.. |.+|+++++++++.+..++.|.+..+ .+. ....++|+|+.|++..
T Consensus 29 ~~vlI~GaG~vG~~a~q~ak~~--G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~ 102 (168)
T d1piwa2 29 KKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSL 102 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred CEEEEECCCCcchhHHHHhhhc--cccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEEecCC
Confidence 7899999999999999988888 99999999999988766666654322 121 2346789999998754
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.24 E-value=0.00028 Score=54.72 Aligned_cols=67 Identities=15% Similarity=0.036 Sum_probs=49.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC--CeEEEEeCCCCCchh----hhc----cC--eeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG--CQIYGQTMTADHHDE----LIN----MG--ITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG--~~V~~l~R~~~~~~~----l~~----~~--v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|+|+|.+|..++-.|+.+ | .|+..+++++++... +.. .. ......|.+.+.++|+||.++|.
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~--~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~l~~adiVVitaG~ 79 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQ--GVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGN 79 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGGGTTCSEEEECCSC
T ss_pred CeEEEECcCHHHHHHHHHHHhc--CCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHHhccccEEEEeccc
Confidence 7899999999999999999988 6 489999987665322 111 11 11223455688999999999985
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 80 ~ 80 (146)
T d1hyha1 80 I 80 (146)
T ss_dssp G
T ss_pred c
Confidence 3
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.24 E-value=0.001 Score=52.14 Aligned_cols=69 Identities=17% Similarity=0.070 Sum_probs=49.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchh----hhcc----Cee--eecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDE----LINM----GIT--PSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~----l~~~----~v~--~d~~d~~~~~~~D~Vi~~a~ 151 (267)
+.||.|+|+|.+|..++..|..+ |. |+..+|++++.... +... +.. ....|.+.+.++|+||.+++
T Consensus 19 ~~KI~IIGaG~VG~~~A~~l~~~--~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~~~~adivvitag 96 (159)
T d2ldxa1 19 RCKITVVGVGDVGMACAISILLK--GLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNVSANSKLVIITAG 96 (159)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGGGTTEEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHhc--CCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhhhccccEEEEecc
Confidence 36899999999999999999988 65 89999988654321 2111 111 11244567899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 97 ~~~ 99 (159)
T d2ldxa1 97 ARM 99 (159)
T ss_dssp CCC
T ss_pred ccc
Confidence 654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.22 E-value=0.00042 Score=54.08 Aligned_cols=69 Identities=12% Similarity=0.077 Sum_probs=48.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc--------cCeeeec---CC-ccccCCCCEEEEc
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN--------MGITPSL---KW-TEATQKFPYVIFC 149 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~--------~~v~~d~---~d-~~~~~~~D~Vi~~ 149 (267)
+++||.|+|+|.+|+.++..|..+ +. |+..++.++++...... .+..... .+ .+++.++|+|+.+
T Consensus 6 k~~KI~IIGaG~VG~~lA~~l~~~--~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvit 83 (154)
T d1pzga1 6 RRKKVAMIGSGMIGGTMGYLCALR--ELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT 83 (154)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC--CCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEe
Confidence 347999999999999999988888 64 89999988765432210 0111111 12 2467899999999
Q ss_pred cCCC
Q 024494 150 APPS 153 (267)
Q Consensus 150 a~~~ 153 (267)
++..
T Consensus 84 ag~~ 87 (154)
T d1pzga1 84 AGLT 87 (154)
T ss_dssp CSCS
T ss_pred cccc
Confidence 9854
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.21 E-value=0.00071 Score=52.72 Aligned_cols=87 Identities=13% Similarity=0.165 Sum_probs=59.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--C----Cc---------cccCCCCEEEEc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--K----WT---------EATQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~----d~---------~~~~~~D~Vi~~ 149 (267)
.+|+|+|+|.+|...++.++.. |.+|+++++++++.+..++.+..... . +. ....++|+||.|
T Consensus 28 ~~vlV~G~G~vG~~~~~~ak~~--Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~ 105 (170)
T d1e3ja2 28 TTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC 105 (170)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred CEEEEEcccccchhhHhhHhhh--cccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeec
Confidence 6899999999999999998888 99999999998887655555543321 1 11 023579999999
Q ss_pred cCCCCCCChHHHHHHHHHHhCCCCcEEEEc
Q 024494 150 APPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (267)
Q Consensus 150 a~~~~~~~~~~~~~~l~~~~~~v~r~V~~S 179 (267)
++.. ..+...+.......++++++
T Consensus 106 ~g~~------~~~~~a~~~~~~~G~iv~~G 129 (170)
T d1e3ja2 106 SGNE------KCITIGINITRTGGTLMLVG 129 (170)
T ss_dssp SCCH------HHHHHHHHHSCTTCEEEECS
T ss_pred CCCh------HHHHHHHHHHhcCCceEEEe
Confidence 8753 12333322233457888765
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.16 E-value=0.00079 Score=51.91 Aligned_cols=67 Identities=12% Similarity=0.086 Sum_probs=45.9
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCC--eEEEEeCCCCCchhhhccCe------eeec--CC-ccccCCCCEEEEccCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGC--QIYGQTMTADHHDELINMGI------TPSL--KW-TEATQKFPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~--~V~~l~R~~~~~~~l~~~~v------~~d~--~d-~~~~~~~D~Vi~~a~~~ 153 (267)
||.|+|+ |.+|+.++-.|..+ +. |+..++.++.+...+.-... .... .+ .+.++++|+||.+++..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~--~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~ 79 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNS--PLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP 79 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTC--TTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred eEEEECCCChHHHHHHHHHHhC--CccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcC
Confidence 7999996 99999999999888 64 78888886543322211111 1111 11 35689999999999965
Q ss_pred C
Q 024494 154 R 154 (267)
Q Consensus 154 ~ 154 (267)
+
T Consensus 80 ~ 80 (144)
T d1mlda1 80 R 80 (144)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=97.12 E-value=0.0016 Score=46.54 Aligned_cols=69 Identities=20% Similarity=0.237 Sum_probs=52.5
Q ss_pred CCeEEEEcccHHh-HHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccCeeeecC-CccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLG-RLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLK-WTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG-~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~v~~d~~-d~~~~~~~D~Vi~~a~~~~ 154 (267)
+++|.++|-|=+| ++||+.|.++ |++|.+.|+.... ...+.+.|+..... +++.+.+.|.||...+...
T Consensus 8 ~~~ihfiGigG~GMs~LA~~L~~~--G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~i~~~d~vV~S~AI~~ 79 (96)
T d1p3da1 8 VQQIHFIGIGGAGMSGIAEILLNE--GYQISGSDIADGVVTQRLAQAGAKIYIGHAEEHIEGASVVVVSSAIKD 79 (96)
T ss_dssp CCEEEEETTTSTTHHHHHHHHHHH--TCEEEEEESCCSHHHHHHHHTTCEEEESCCGGGGTTCSEEEECTTSCT
T ss_pred CCEEEEEEECHHHHHHHHHHHHhC--CCEEEEEeCCCChhhhHHHHCCCeEEECCccccCCCCCEEEECCCcCC
Confidence 4899999976666 6789999999 9999999987543 34556678776553 3456788999999887653
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=97.10 E-value=0.0017 Score=45.90 Aligned_cols=68 Identities=21% Similarity=0.224 Sum_probs=51.8
Q ss_pred CeEEEEcccHHh-HHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccCeeeec-CCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLG-RLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSL-KWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG-~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~v~~d~-~d~~~~~~~D~Vi~~a~~~~ 154 (267)
|||-++|-|=+| +.||+.|+++ |++|.+.|+.+.. ...|...|+.... .+++.+.++|.||...+...
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~--G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~i~~~d~vV~SsAI~~ 72 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSN--GNDVYGSNIEETERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRD 72 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEECSSCCHHHHHHHHTTCCEESSCCTTSCCCCSEEEECTTCCT
T ss_pred cEEEEEeECHHHHHHHHHHHHhC--CCeEEEEeCCCChhHHHHHHCCCeEEeeecccccCCCCEEEEecCcCC
Confidence 789999964444 4689999999 9999999997543 3457778887654 34556788999999888653
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=97.09 E-value=0.00051 Score=54.09 Aligned_cols=66 Identities=18% Similarity=0.260 Sum_probs=44.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEe-CCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT-MTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~-R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
+||.|+|+|.+|+.+++.|.+. |+.+++++. |+++... ..++.......+...++|+|+.|.++..
T Consensus 4 irvgiiG~G~ig~~~~~~l~~~-~~~elvav~~~~~~~~~---~~~~~~~~~~~~~~~~~D~Vvi~tp~~~ 70 (170)
T d1f06a1 4 IRVAIVGYGNLGRSVEKLIAKQ-PDMDLVGIFSRRATLDT---KTPVFDVADVDKHADDVDVLFLCMGSAT 70 (170)
T ss_dssp EEEEEECCSHHHHHHHHHHTTC-SSEEEEEEEESSSCCSS---SSCEEEGGGGGGTTTTCSEEEECSCTTT
T ss_pred ceEEEECChHHHHHHHHHHHhC-CCcEEEEEEeccccccc---ccccccchhhhhhccccceEEEeCCCcc
Confidence 5799999999999999999875 588888665 4443321 1222222222235578999999887653
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.08 E-value=0.00056 Score=54.78 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=33.7
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
.+||.|+|+|.+|+.++..++.. |++|+.++++++..
T Consensus 4 I~~vaViGaG~mG~~iA~~~a~~--G~~V~l~D~~~~~l 40 (186)
T d1wdka3 4 VKQAAVLGAGIMGGGIAYQSASK--GTPILMKDINEHGI 40 (186)
T ss_dssp CSSEEEECCHHHHHHHHHHHHHT--TCCEEEECSSHHHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHH
Confidence 37899999999999999999999 99999999987643
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.08 E-value=0.0011 Score=52.96 Aligned_cols=64 Identities=17% Similarity=0.210 Sum_probs=48.7
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC-ccccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW-TEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d-~~~~~~~D~Vi~~a~~~~ 154 (267)
..-++|.|+|.|.||+.+++.|..- |.+|++++|.+..... .. ..+ .+.+..+|+|+.+++...
T Consensus 40 l~gk~vgIiG~G~IG~~va~~l~~~--g~~v~~~d~~~~~~~~------~~-~~~l~ell~~sDiv~~~~pl~~ 104 (181)
T d1qp8a1 40 IQGEKVAVLGLGEIGTRVGKILAAL--GAQVRGFSRTPKEGPW------RF-TNSLEEALREARAAVCALPLNK 104 (181)
T ss_dssp CTTCEEEEESCSTHHHHHHHHHHHT--TCEEEEECSSCCCSSS------CC-BSCSHHHHTTCSEEEECCCCST
T ss_pred ccCceEEEeccccccccceeeeecc--ccccccccccccccce------ee-eechhhhhhccchhhccccccc
Confidence 3448999999999999999999999 9999999997643211 00 112 246889999998887654
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.04 E-value=0.00055 Score=54.41 Aligned_cols=32 Identities=28% Similarity=0.319 Sum_probs=27.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT 116 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~ 116 (267)
|+||.|+|+ ||+|+.|++.|.++ |..+|..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~H-P~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRH-PHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHC-TTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhC-CCCceEeeE
Confidence 799999996 99999999988775 788887664
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.04 E-value=0.0028 Score=52.33 Aligned_cols=34 Identities=18% Similarity=0.289 Sum_probs=30.4
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
..||||+ +-||++++++|+++ |++|+.++|+.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~--G~~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQ--GFRVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHC--CCEEEEEECCchH
Confidence 4689996 78999999999999 9999999998654
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.03 E-value=0.00048 Score=53.89 Aligned_cols=67 Identities=13% Similarity=0.247 Sum_probs=51.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee--ecCCc----cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP--SLKWT----EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~--d~~d~----~~~~~~D~Vi~~a~~~ 153 (267)
.+|+|.|+|-+|...++.++.. |.+|+++++++++.+..++.|.+. +..+. ....++|+||.+++..
T Consensus 32 ~~VlI~GaG~vG~~a~qlak~~--Ga~~i~~~~~~~~~~~a~~lGad~~i~~~~~~~~~~~~~~~D~vid~~g~~ 104 (168)
T d1uufa2 32 KKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAP 104 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHHHTCSEEEETTCHHHHHTTTTCEEEEEECCSSC
T ss_pred CEEEEeccchHHHHHHHHhhcc--cccchhhccchhHHHHHhccCCcEEEECchhhHHHHhcCCCceeeeeeecc
Confidence 7899999999999999999888 999999999888765555556543 22222 2456899999998754
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.01 E-value=0.0003 Score=55.40 Aligned_cols=66 Identities=11% Similarity=0.183 Sum_probs=49.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
.++|+|+|+|-.+++++..|.+. |. +|+++.|+.++...+.. .+... +.+ ....++|+||+|.+..
T Consensus 17 ~~~vlIlGaGGaarai~~aL~~~--g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~-~~~~~~DliINaTpiG 84 (167)
T d1npya1 17 NAKVIVHGSGGMAKAVVAAFKNS--GFEKLKIYARNVKTGQYLAALYGYAY-INS-LENQQADILVNVTSIG 84 (167)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHT--TCCCEEEECSCHHHHHHHHHHHTCEE-ESC-CTTCCCSEEEECSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEecccHHHHHHHHHhhhhhh-hhc-ccccchhhheeccccC
Confidence 37899999999999999999999 86 79999999887766643 22221 111 1235789999998754
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.01 E-value=0.00046 Score=54.37 Aligned_cols=65 Identities=14% Similarity=0.183 Sum_probs=51.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CCc----cccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT----EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~----~~~~~~D~Vi~~a~ 151 (267)
.+|||.|+ |-+|+..++.++.. |.+|+++++++++.+.+++.|.+..+ .+. ....++|+||.+.|
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~--G~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHHTTCSEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CEEEEEeccccchhhhhhhhccc--ccccccccccccccccccccccceeeehhhhhhhhhccccccccccccc
Confidence 68999995 99999999999998 99999999998887777666764432 221 24578999999876
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.00053 Score=54.00 Aligned_cols=68 Identities=19% Similarity=0.267 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc----CeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM----GITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~----~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.++|||+|+|=.+++++..|.+. |.+|+.+.|+.++...+.+. +........ .....+|+||+|.+..
T Consensus 18 ~k~vlIlGaGGaarai~~al~~~--g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~dliIN~Tp~G 90 (170)
T d1nyta1 18 GLRILLIGAGGASRGVLLPLLSL--DCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 90 (170)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECCcHHHHHHHHHhccc--ceEEEeccchHHHHHHHHHHHhhcccccccccccccccccceeecccccC
Confidence 37899999999999999999999 99999999998877655431 111111111 2346799999998754
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.00 E-value=0.0024 Score=53.37 Aligned_cols=34 Identities=26% Similarity=0.327 Sum_probs=28.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.-+||||+ +-||++++++|.++ |++|+..+++.+
T Consensus 3 pVAlITGas~GIG~aiA~~la~~--Ga~V~i~~~~~~ 37 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAE--GYAVCLHYHRSA 37 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHT--TCEEEEEESSCH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEeCCCH
Confidence 44688886 88999999999999 999999887643
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.99 E-value=0.00069 Score=54.39 Aligned_cols=69 Identities=10% Similarity=-0.009 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
-++|.|+|+|.||+.+++.|..- |.+|.+.++...........++.....-.+.++++|+|+.+.+...
T Consensus 44 ~~~vgiiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~ 112 (188)
T d2naca1 44 AMHVGTVAAGRIGLAVLRRLAPF--DVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHP 112 (188)
T ss_dssp TCEEEEECCSHHHHHHHHHHGGG--TCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCT
T ss_pred ccceeeccccccchhhhhhhhcc--CceEEEEeeccccccccccccccccCCHHHHHHhccchhhcccccc
Confidence 47999999999999999999998 9999999997554333222233322222246788999988877554
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.85 E-value=0.0044 Score=47.59 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=44.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcC-CCCeEEEEeCCCCCchh----hhccCe----eee--cCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQTMTADHHDE----LINMGI----TPS--LKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~-pG~~V~~l~R~~~~~~~----l~~~~v----~~d--~~d~~~~~~~D~Vi~~a~~ 152 (267)
|||.|+|+ |.+|++++-.|..+. -..|+..++..+. ... +..... ... ..+.+.+.++|+||.++|.
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~-~~g~a~Dl~h~~~~~~~~~~~~~~~~~~~~~aDvvvitaG~ 79 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATPALEGADVVLISAGV 79 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTT-HHHHHHHHHTSCSSCEEEEECSSCCHHHHTTCSEEEECCSC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEeccccc-chhHHHHHHCCccccCCcEEEcCCCccccCCCCEEEECCCc
Confidence 79999995 999999998875431 1468999987543 221 111110 011 1223568899999999996
Q ss_pred CC
Q 024494 153 SR 154 (267)
Q Consensus 153 ~~ 154 (267)
.+
T Consensus 80 ~~ 81 (145)
T d2cmda1 80 RR 81 (145)
T ss_dssp CC
T ss_pred cC
Confidence 54
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.85 E-value=0.0083 Score=46.19 Aligned_cols=67 Identities=15% Similarity=0.111 Sum_probs=47.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhh----c----cCee--ee-cCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELI----N----MGIT--PS-LKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~----~----~~v~--~d-~~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|+|+|.+|+.++..|..+ + .|+..++++++...... . .+.. .. ..+.+.+.++|+|+.+++.
T Consensus 4 ~KI~IIGaG~VG~~~a~~l~~~--~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag~ 81 (150)
T d1t2da1 4 AKIVLVGSGMIGGVMATLIVQK--NLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAGF 81 (150)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCSC
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccccccCCCcEEEEeccc
Confidence 7999999999999999877776 5 38999999876543221 1 0111 11 1344688999999999995
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 82 ~ 82 (150)
T d1t2da1 82 T 82 (150)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.0015 Score=50.07 Aligned_cols=65 Identities=8% Similarity=0.063 Sum_probs=48.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCch----hhhccCeeeec---CCc-----cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHD----ELINMGITPSL---KWT-----EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~----~l~~~~v~~d~---~d~-----~~~~~~D~Vi~~a~ 151 (267)
.+|+|+|.|-+|+.+++.|.++ |++|++++.+++... .+...++.... .|+ ..+.++|+||.+.+
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~--~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQR--GQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHc--CCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 5799999999999999999999 999999999876432 22233555433 343 24578999998864
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.81 E-value=0.00078 Score=53.22 Aligned_cols=69 Identities=20% Similarity=0.123 Sum_probs=50.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----CeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
.++|+|+|+|-.+++++..|.+. +-+|+.+.|+.++...+.+. .+.....+...+..+|.||+|.+...
T Consensus 18 ~k~vlIlGaGGaarai~~aL~~~--~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiIN~tp~g~ 91 (171)
T d1p77a1 18 NQHVLILGAGGATKGVLLPLLQA--QQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAGL 91 (171)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHT--TCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC--
T ss_pred CCEEEEECCcHHHHHHHHHHccc--CceeeeccchHHHHHHHHHHHhhccccchhhhccccccccceeeecccccc
Confidence 37899999999999999999987 78999999998776655321 12222222234678999999988653
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=96.80 E-value=0.0026 Score=50.66 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=32.8
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
..++|+|+|+|..|...+..|.++ ||+|+.+.+.+.
T Consensus 42 ~~k~V~IIGaGPAGL~AA~~la~~--G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 42 QKKNLAVVGAGPAGLAFAINAAAR--GHQVTLFDAHSE 77 (179)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSS
T ss_pred CCcEEEEECccHHHHHHHHHHHhh--ccceEEEeccCc
Confidence 348999999999999999999999 999999998753
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.80 E-value=0.00076 Score=54.58 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=31.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+||+|+|+|..|...|.+|.++ |++|++++|..
T Consensus 7 ~kVvVIGaGiaGl~~A~~L~~~--G~~V~vier~~ 39 (268)
T d1c0pa1 7 KRVVVLGSGVIGLSSALILARK--GYSVHILARDL 39 (268)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSC
T ss_pred CcEEEECccHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 6899999999999999999999 99999999853
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.79 E-value=0.00067 Score=54.16 Aligned_cols=69 Identities=16% Similarity=0.092 Sum_probs=43.3
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh---cc--C-eeeecCCcc-ccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NM--G-ITPSLKWTE-ATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~---~~--~-v~~d~~d~~-~~~~~D~Vi~~a~~~ 153 (267)
|+||.|+|+ |++|+.|++.|.+ +|..++..+..+......+. .. + ......+++ ...++|+||.+.+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~-HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~~~~~~dvvf~a~p~~ 77 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKN-HPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEKVSKNCDVLFTALPAG 77 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHH-CTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHHHHHHCSEEEECCSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-CCCceEEEeeccccCCCcccccCchhhccccccccCHhHhccccceEEEccccH
Confidence 789999996 9999999998875 47889888764432221111 11 0 111112222 335799999887654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.77 E-value=0.0013 Score=53.12 Aligned_cols=70 Identities=16% Similarity=0.116 Sum_probs=48.7
Q ss_pred CCCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCC
Q 024494 82 VGENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 82 ~~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
..-++|.|+|.|-||+.+++.|..- |.+|.+.++....... ...++.....-.+.+..+|+|+.+.+...
T Consensus 47 L~gktvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~-~~~~~~~~~~l~~ll~~sD~i~~~~plt~ 116 (193)
T d1mx3a1 47 IRGETLGIIGLGRVGQAVALRAKAF--GFNVLFYDPYLSDGVE-RALGLQRVSTLQDLLFHSDCVTLHCGLNE 116 (193)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCTTHH-HHHTCEECSSHHHHHHHCSEEEECCCCCT
T ss_pred eeCceEEEeccccccccceeeeecc--ccceeeccCcccccch-hhhccccccchhhccccCCEEEEeecccc
Confidence 3448999999999999999999998 9999999986544321 11233221111235677898888777554
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.74 E-value=0.00072 Score=53.45 Aligned_cols=87 Identities=14% Similarity=0.135 Sum_probs=58.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeee--cCCc------c------ccCCCCEEEEc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPS--LKWT------E------ATQKFPYVIFC 149 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d--~~d~------~------~~~~~D~Vi~~ 149 (267)
.+|||+|+|-+|...++.++.. |. +|+++++++++.+..++.|.... ..+. + ...++|+||.|
T Consensus 30 ~~VlV~GaG~iG~~~~~~ak~~--Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid~ 107 (182)
T d1vj0a2 30 KTVVIQGAGPLGLFGVVIARSL--GAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEA 107 (182)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEEC
T ss_pred CEEEEECCCccchhheeccccc--ccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEeec
Confidence 6899999999999999999988 97 79999999888766565665332 2221 0 13469999999
Q ss_pred cCCCCCCChHHHHHHHHHHhCCCCcEEEEc
Q 024494 150 APPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (267)
Q Consensus 150 a~~~~~~~~~~~~~~l~~~~~~v~r~V~~S 179 (267)
++... .+...+.......++++++
T Consensus 108 vG~~~------~~~~a~~~l~~~G~iv~~G 131 (182)
T d1vj0a2 108 TGDSR------ALLEGSELLRRGGFYSVAG 131 (182)
T ss_dssp SSCTT------HHHHHHHHEEEEEEEEECC
T ss_pred CCchh------HHHHHHHHhcCCCEEEEEe
Confidence 87542 1222222222346777765
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.72 E-value=0.0011 Score=52.99 Aligned_cols=69 Identities=14% Similarity=0.161 Sum_probs=42.8
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh---cc-Ceeee---c-CCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI---NM-GITPS---L-KWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~---~~-~v~~d---~-~d~~~~~~~D~Vi~~a~~~ 153 (267)
+.||.|+|+ ||+|+.|++.|.++ |..++..+.-+......+. .. ....+ . .+.+...++|+||.+++..
T Consensus 5 kikVaIlGATGyvG~elirLL~~H-P~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~ 82 (183)
T d2cvoa1 5 EVRIAVLGASGYTGAEIVRLLANH-PQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHG 82 (183)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTC-SSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSS
T ss_pred ccEEEEECcccHHHHHHHHHHHhC-CCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccc
Confidence 468999996 99999999999875 7889887753322111111 11 00001 0 1113456899999888654
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=96.70 E-value=0.0013 Score=53.56 Aligned_cols=68 Identities=16% Similarity=0.172 Sum_probs=50.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
-++|+|-|.|.+|+++++.|.+. |.+|++.+.+++........+.+..-.+.....+||+++-||...
T Consensus 27 gk~v~IqG~G~VG~~~A~~L~~~--Gakvvv~d~d~~~~~~~~~~g~~~~~~~~~~~~~~DI~iPcA~~~ 94 (201)
T d1c1da1 27 GLTVLVQGLGAVGGSLASLAAEA--GAQLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGG 94 (201)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEecchHHHHHHHHhhcccccCccccccccceeeecccccc
Confidence 48899999999999999999999 999999988766554444344433222222346899999888654
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.69 E-value=0.0095 Score=49.88 Aligned_cols=32 Identities=25% Similarity=0.269 Sum_probs=29.0
Q ss_pred CeEEEEcc-c--HHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGP-G--VLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~Ga-G--~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
|++||||+ | =||+.++++|+++ |++|+..+|+
T Consensus 9 K~alVTGass~~GIG~aiA~~la~~--Ga~Vvi~~~~ 43 (297)
T d1d7oa_ 9 KRAFIAGIADDNGYGWAVAKSLAAA--GAEILVGTWV 43 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEEEH
T ss_pred CEEEEECCCCCchHHHHHHHHHHHC--CCEEEEEeCc
Confidence 78999997 5 5999999999999 9999998875
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=96.62 E-value=0.00085 Score=53.08 Aligned_cols=93 Identities=13% Similarity=0.262 Sum_probs=64.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CCc---------cccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---------EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~---------~~~~~~D~Vi~~a~~ 152 (267)
.+|||.|+ |-+|+.+++..+.. |.+|+++++++++.+.++..+....+ .+. ....++|+||.+.+.
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 108 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CEEEEEeCCCchhHHHHHHHHcc--CCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecCc
Confidence 68999996 99999999999999 99999999998877666666654322 221 134679999999863
Q ss_pred CCCCChHHHHHHHHHHhCCCCcEEEEcCCccccC
Q 024494 153 SRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYDC 186 (267)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~v~r~V~~SS~~VYg~ 186 (267)
. .....+.....-.+++.++....|+.
T Consensus 109 ~-------~~~~~~~~l~~~G~~v~~G~~~~~~~ 135 (182)
T d1v3va2 109 E-------FLNTVLSQMKDFGKIAICGAISVYNR 135 (182)
T ss_dssp H-------HHHHHGGGEEEEEEEEECCCGGGTTC
T ss_pred h-------hhhhhhhhccCCCeEEeecceeeccc
Confidence 2 12222112223467888777666654
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.0011 Score=52.14 Aligned_cols=65 Identities=15% Similarity=0.095 Sum_probs=48.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
++++|+|.|.+|+.+|+.|+.. |.+|++.+++|.+.-+-...+..... ..+++...|+|+-+.+-
T Consensus 25 k~v~V~GyG~iG~g~A~~~rg~--G~~V~v~e~dp~~al~A~~dG~~v~~-~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 25 KVAVVAGYGDVGKGCAQALRGF--GARVIITEIDPINALQAAMEGYEVTT-MDEACQEGNIFVTTTGC 89 (163)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCEECC-HHHHTTTCSEEEECSSC
T ss_pred CEEEEeccccccHHHHHHHHhC--CCeeEeeecccchhHHhhcCceEeee-hhhhhhhccEEEecCCC
Confidence 8899999999999999999999 99999999987543221222443322 22467788988877764
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.58 E-value=0.0014 Score=52.73 Aligned_cols=68 Identities=15% Similarity=0.069 Sum_probs=48.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
-++|.|+|.|.||+.+++.|..- |.+|.+.++............... ..+. +.+..+|+|+.+++...
T Consensus 47 g~tvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~~~~~~~~-~~~l~~ll~~sD~v~l~~plt~ 115 (191)
T d1gdha1 47 NKTLGIYGFGSIGQALAKRAQGF--DMDIDYFDTHRASSSDEASYQATF-HDSLDSLLSVSQFFSLNAPSTP 115 (191)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSCCCHHHHHHHTCEE-CSSHHHHHHHCSEEEECCCCCT
T ss_pred ccceEEeecccchHHHHHHHHhh--ccccccccccccccchhhcccccc-cCCHHHHHhhCCeEEecCCCCc
Confidence 38899999999999999999998 999999998655432222111111 1121 46778999988777654
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.58 E-value=0.0015 Score=50.96 Aligned_cols=87 Identities=15% Similarity=0.247 Sum_probs=59.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeec----CCc---------cccCCCCEEEEcc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT---------EATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~----~d~---------~~~~~~D~Vi~~a 150 (267)
.+|+|+|+|.+|...+..+... |. +|+++++++++.+..++.|.+... .+. ....++|+||.|+
T Consensus 28 d~VlI~G~G~iG~~~~~~a~~~--G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~ 105 (171)
T d1pl8a2 28 HKVLVCGAGPIGMVTLLVAKAM--GAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 105 (171)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred CEEEEECCCccHHHHHHHHHHc--CCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence 6899999999999999999998 88 799999998877655556654322 111 1235799999998
Q ss_pred CCCCCCChHHHHHHHHHHhCCCCcEEEEc
Q 024494 151 PPSRSLDYPGDVRLAALSWNGEGSFLFTS 179 (267)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~~~v~r~V~~S 179 (267)
+... .+...+.......++++++
T Consensus 106 G~~~------~~~~a~~~~~~gG~iv~~G 128 (171)
T d1pl8a2 106 GAEA------SIQAGIYATRSGGTLVLVG 128 (171)
T ss_dssp CCHH------HHHHHHHHSCTTCEEEECS
T ss_pred CCch------hHHHHHHHhcCCCEEEEEe
Confidence 7531 2222222223456788765
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=96.56 E-value=0.01 Score=45.25 Aligned_cols=68 Identities=13% Similarity=0.079 Sum_probs=46.0
Q ss_pred eEEEEc-ccHHhHHHHHHHHhcCCCC--eEEEEeCCCC--Cch----hhhc-----cCeeeecCCccccCCCCEEEEccC
Q 024494 86 DLLIVG-PGVLGRLVAEQWRQEHPGC--QIYGQTMTAD--HHD----ELIN-----MGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 86 ~ILV~G-aG~IG~~La~~L~~~~pG~--~V~~l~R~~~--~~~----~l~~-----~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
||.|+| +|.+|+.++-.|..+ +. |+..++.... ... ++.. ........+.+.+.++|+|+.+|+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~--~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~~~~aDiVvitaG 79 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALR--DIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYEDTAGSDVVVITAG 79 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHT--TCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGGGTTCSEEEECCC
T ss_pred eEEEECCCCcHHHHHHHHHHhC--CCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHHhhhcCEEEEecc
Confidence 799999 599999999999998 64 7888886322 111 1111 011112244567899999999999
Q ss_pred CCCC
Q 024494 152 PSRS 155 (267)
Q Consensus 152 ~~~~ 155 (267)
..+.
T Consensus 80 ~~~~ 83 (142)
T d1o6za1 80 IPRQ 83 (142)
T ss_dssp CCCC
T ss_pred cccc
Confidence 6543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.56 E-value=0.0045 Score=45.04 Aligned_cols=64 Identities=17% Similarity=0.044 Sum_probs=46.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc-hhhh-ccCeeeecC--CccccCCCCEEEEcc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH-DELI-NMGITPSLK--WTEATQKFPYVIFCA 150 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~-~~l~-~~~v~~d~~--d~~~~~~~D~Vi~~a 150 (267)
++|||+|.|.+|..-++.|++. |.+|++++...... ..+. ...+.+... +.+.+.+++.|+.+.
T Consensus 13 k~vlVvG~G~va~~ka~~ll~~--ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~dl~~~~lv~~at 80 (113)
T d1pjqa1 13 RDCLIVGGGDVAERKARLLLEA--GARLTVNALTFIPQFTVWANEGMLTLVEGPFDETLLDSCWLAIAAT 80 (113)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHHC--CCeEEEEeccCChHHHHHHhcCCceeeccCCCHHHhCCCcEEeecC
Confidence 7999999999999999999999 99999998765432 1222 123444332 234678899888664
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.51 E-value=0.0012 Score=51.72 Aligned_cols=87 Identities=15% Similarity=0.178 Sum_probs=59.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--cCCcc---------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--LKWTE---------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--~~d~~---------~~~~~D~Vi~~a~~ 152 (267)
.+|||.|+ |-+|...++.++.. |.+|+++++++++.+.+++.|.... ..+.+ ...++|+||.+++.
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~--G~~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~ 107 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN 107 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHHTTCSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred CEEEEEecccccccccccccccc--CcccccccccccccccccccCcccccccccccHHHHhhhhhccCCceEEeecccH
Confidence 68999996 99999999999998 9999999998877666666665432 22221 23569999998763
Q ss_pred CCCCChHHHHHHHHHHhCCCCcEEEEcC
Q 024494 153 SRSLDYPGDVRLAALSWNGEGSFLFTSS 180 (267)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~v~r~V~~SS 180 (267)
. . +...+.......++|.++.
T Consensus 108 ~----~---~~~~~~~l~~~G~iv~~G~ 128 (174)
T d1yb5a2 108 V----N---LSKDLSLLSHGGRVIVVGS 128 (174)
T ss_dssp H----H---HHHHHHHEEEEEEEEECCC
T ss_pred H----H---HHHHHhccCCCCEEEEEec
Confidence 1 1 2222222233467887653
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.50 E-value=0.0011 Score=53.70 Aligned_cols=65 Identities=12% Similarity=0.177 Sum_probs=47.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
-++|.|+|.|.||+.+++.|..- |.+|++.++....... ..+... .+. +.+..+|+|+.+++...
T Consensus 43 gk~vgIiG~G~IG~~va~~l~~f--g~~V~~~d~~~~~~~~--~~~~~~--~~l~~~l~~sDii~~~~plt~ 108 (197)
T d1j4aa1 43 DQVVGVVGTGHIGQVFMQIMEGF--GAKVITYDIFRNPELE--KKGYYV--DSLDDLYKQADVISLHVPDVP 108 (197)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCHHHH--HTTCBC--SCHHHHHHHCSEEEECSCCCG
T ss_pred CCeEEEecccccchhHHHhHhhh--cccccccCcccccccc--cceeee--ccccccccccccccccCCccc
Confidence 38999999999999999999988 9999999876543221 122221 222 35678999998887653
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.47 E-value=0.0042 Score=45.54 Aligned_cols=64 Identities=19% Similarity=0.247 Sum_probs=45.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-hhccCeeeecCCcccc------CCCCEEEEc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-LINMGITPSLKWTEAT------QKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-l~~~~v~~d~~d~~~~------~~~D~Vi~~ 149 (267)
..||.|+|.|.+|+-++....+. |++|++++.+++.... +....+..+..|.+.+ .++|+|-+=
T Consensus 11 ~~kigIlGgGQL~rMla~aA~~l--G~~v~v~d~~~~~PA~~va~~~i~~~~~d~~~l~~~~~~~~~DviT~E 81 (111)
T d1kjqa2 11 ATRVMLLGSGELGKEVAIECQRL--GVEVIAVDRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPE 81 (111)
T ss_dssp CCEEEEESCSHHHHHHHHHHHTT--TCEEEEEESSTTCGGGGGSSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHC--CCEEEEEcCCCCCchhhcCCeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence 47899999999999999999999 9999999998765332 2222333455554311 367888643
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.46 E-value=0.0018 Score=50.86 Aligned_cols=66 Identities=15% Similarity=0.235 Sum_probs=51.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CC---c----cccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KW---T----EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d---~----~~~~~~D~Vi~~a~~ 152 (267)
..|||.|+ |-+|...++..+.. |.+|+++++++++.+.+...+.+..+ .+ . ...+++|+||.+.+.
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~~~~lGad~vi~~~~~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHHHTCSEEEEHHHHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CEEEEeCCcchHHHHHHHHHHHc--CCceEEEecCHHHHHHHHhhcccceEeccchhchhhhcccCCCceEEEecCcH
Confidence 46999995 99999999999999 99999999999998877776655432 11 1 123579999999864
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.43 E-value=0.0066 Score=52.31 Aligned_cols=33 Identities=18% Similarity=0.185 Sum_probs=27.8
Q ss_pred CeEEEEccc---HHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPG---VLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG---~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+-.||||+| =||+.++++|.++ |.+|+...+..
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~--GA~V~i~~~~~ 38 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKR--NVKIIFGIWPP 38 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHT--TCEEEEEECGG
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHc--CCEEEEEeCch
Confidence 457899964 6999999999999 99999887653
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.43 E-value=0.002 Score=47.76 Aligned_cols=34 Identities=32% Similarity=0.424 Sum_probs=32.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++|+|+|+|++|-.++..|.+. |.+|+.+.+.+.
T Consensus 31 ~~vvIIGgG~iG~E~A~~l~~~--g~~Vtli~~~~~ 64 (121)
T d1d7ya2 31 SRLLIVGGGVIGLELAATARTA--GVHVSLVETQPR 64 (121)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CeEEEECcchhHHHHHHHhhcc--cceEEEEeeccc
Confidence 7899999999999999999999 999999999764
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.39 E-value=0.0027 Score=46.41 Aligned_cols=35 Identities=14% Similarity=0.297 Sum_probs=32.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
++|+|+|+|++|..+|..|.+. |.+|+.+.|.+.-
T Consensus 23 ~~v~IiGgG~ig~E~A~~l~~~--G~~Vtlve~~~~i 57 (117)
T d1ebda2 23 KSLVVIGGGYIGIELGTAYANF--GTKVTILEGAGEI 57 (117)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSSS
T ss_pred CeEEEECCCccceeeeeeeccc--ccEEEEEEeccee
Confidence 7899999999999999999999 9999999987653
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.38 E-value=0.0023 Score=47.63 Aligned_cols=63 Identities=11% Similarity=0.073 Sum_probs=48.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCC---c-----cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKW---T-----EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d---~-----~~~~~~D~Vi~~a~ 151 (267)
++|+|+|.|-+|+.+++.|. +++|.+++.+++....+...++.....| + ..+.+++.++.+..
T Consensus 1 kHivI~G~g~~g~~l~~~L~----~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICGWSESTLECLRELR----GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEESCCHHHHHHHHTSC----GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECCCHHHHHHHHHHc----CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 46899999999999999994 4568888998887776666676655444 3 24678999997653
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.34 E-value=0.0017 Score=51.50 Aligned_cols=71 Identities=17% Similarity=0.215 Sum_probs=46.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC-CCCCc-hhhhccCeeeec------------------CCccccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHH-DELINMGITPSL------------------KWTEATQK 142 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R-~~~~~-~~l~~~~v~~d~------------------~d~~~~~~ 142 (267)
|++||.|-|.|.||+.+++.|.++ |+.+|+++.- .+... ..+...+..... ...+...+
T Consensus 1 M~irIaINGfGRIGR~v~Ral~~~-~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (172)
T d2czca2 1 MKVKVGVNGYGTIGKRVAYAVTKQ-DDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (172)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred CcEEEEEECCCHHHHHHHHHHHhC-CCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence 457999999999999999999876 4788887753 33221 112222221110 00124568
Q ss_pred CCEEEEccCCCC
Q 024494 143 FPYVIFCAPPSR 154 (267)
Q Consensus 143 ~D~Vi~~a~~~~ 154 (267)
+|+|+-|.|...
T Consensus 80 vDvViEcTG~f~ 91 (172)
T d2czca2 80 VDIIVDATPGGI 91 (172)
T ss_dssp CSEEEECCSTTH
T ss_pred CCEEEECCCCCC
Confidence 999999998753
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.33 E-value=0.002 Score=50.82 Aligned_cols=70 Identities=16% Similarity=0.125 Sum_probs=54.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc---CeeeecCCc----cccCCCCEEEEccCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM---GITPSLKWT----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~---~v~~d~~d~----~~~~~~D~Vi~~a~~~~ 154 (267)
...+|+|+|+|..|..-++..+.. |.+|+++|.+.++.+.+... .++....+. +.+.++|+||-++-...
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~l--GA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG 107 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPG 107 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTT
T ss_pred CCcEEEEECCChHHHHHHHHHhhC--CCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCC
Confidence 347999999999999999999999 99999999998777655432 233333332 46789999999987543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.30 E-value=0.0027 Score=46.55 Aligned_cols=35 Identities=17% Similarity=0.178 Sum_probs=32.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
++|+|+|+|++|..++..|.+. |++|+.+.|.+.-
T Consensus 22 ~~vvIiGgG~ig~E~A~~l~~~--G~~Vtlve~~~~~ 56 (116)
T d1gesa2 22 ERVAVVGAGYIGVELGGVINGL--GAKTHLFEMFDAP 56 (116)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CEEEEECCChhhHHHHHHhhcc--ccEEEEEeecchh
Confidence 7899999999999999999999 9999999997643
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.30 E-value=0.0026 Score=47.12 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=32.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
.++++|+|+|+||..++..|.+. |.+|+.+.+.+.-
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~l--G~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRL--GSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhh--CcceeEEEecccc
Confidence 37899999999999999999999 9999999987643
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.28 E-value=0.0017 Score=51.21 Aligned_cols=87 Identities=16% Similarity=0.134 Sum_probs=58.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeee--cCCc-------c--ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPS--LKWT-------E--ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d--~~d~-------~--~~~~~D~Vi~~a~~ 152 (267)
.+|+|+|+|-+|...++.++.. |. +|+++++++++.+..++.|.... ..+. + .-.++|+||.|++.
T Consensus 29 ~~VlI~GaG~vGl~~~q~ak~~--Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~ 106 (174)
T d1jqba2 29 SSVVVIGIGAVGLMGIAGAKLR--GAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGG 106 (174)
T ss_dssp CCEEEECCSHHHHHHHHHHHTT--TCSCEEEECCCHHHHHHHHHHTCSEEECGGGSCHHHHHHHHTTTSCEEEEEECSSC
T ss_pred CEEEEEcCCcchhhhhhhhhcc--cccccccccchhhhHHHHHhhCccccccccchhHHHHHHHHhhccCcceEEEccCC
Confidence 6899999999999999999888 86 79999998877655555564322 2221 1 12469999999986
Q ss_pred CCCCChHHHHHHHHHHhCCCCcEEEEc
Q 024494 153 SRSLDYPGDVRLAALSWNGEGSFLFTS 179 (267)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~v~r~V~~S 179 (267)
.. .+...+.......+++.++
T Consensus 107 ~~------~~~~a~~~~~~~G~iv~~G 127 (174)
T d1jqba2 107 SE------TLSQAVKMVKPGGIISNIN 127 (174)
T ss_dssp TT------HHHHHHHHEEEEEEEEECC
T ss_pred HH------HHHHHHHHHhcCCEEEEEe
Confidence 42 1222222222346777755
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.23 E-value=0.0031 Score=46.47 Aligned_cols=35 Identities=17% Similarity=0.200 Sum_probs=32.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.++|+|+|+|++|-.++..|.+. |.+|+.+.|.+.
T Consensus 22 p~~v~IiGgG~iG~E~A~~l~~~--g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGSGYIAVELINVIKRL--GIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSSS
T ss_pred CCEEEEECCchHHHHHHHHHHhc--cccceeeehhcc
Confidence 37899999999999999999999 999999999754
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.23 E-value=0.0019 Score=51.54 Aligned_cols=34 Identities=24% Similarity=0.428 Sum_probs=29.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
|-||.|.|.|.||+.+++.|.++ |+.+|+++...
T Consensus 1 MIKVaINGfGRIGR~v~Ral~~~-~dievVaInd~ 34 (178)
T d1b7go1 1 MVNVAVNGYGTIGKRVADAIIKQ-PDMKLVGVAKT 34 (178)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTC-TTEEEEEEECS
T ss_pred CeEEEEECCCHHHHHHHHHHHhC-CCCEEEEEECC
Confidence 57899999999999999999987 57899988643
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.19 E-value=0.0023 Score=49.43 Aligned_cols=66 Identities=15% Similarity=0.138 Sum_probs=47.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee--cCCc-------cccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS--LKWT-------EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d--~~d~-------~~~~~~D~Vi~~a~~ 152 (267)
.+|+|.|+|.+|...++.++.. |.+|+++++++++.+..++.|.+.. ..+. +...+.|.+|.+.+.
T Consensus 29 ~~VlV~GaG~vG~~~~~~ak~~--G~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~~ 103 (166)
T d1llua2 29 QWVAISGIGGLGHVAVQYARAM--GLHVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVS 103 (166)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEECCSC
T ss_pred CEEEEeeccccHHHHHHHHHHc--CCccceecchhhHHHhhhccCccccccccchhHHHHHHHhhcCCccccccccc
Confidence 6899999999999999988888 9999999999887766666665432 2221 123456666666543
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.18 E-value=0.0046 Score=45.07 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=32.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.++++|+|+|++|-.++..|.+. |++|+.+.+.+.
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~--g~~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKL--GAQVSVVEARER 55 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhc--ccceEEEeeecc
Confidence 37899999999999999999999 999999998754
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.17 E-value=0.0028 Score=51.20 Aligned_cols=64 Identities=9% Similarity=0.162 Sum_probs=47.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~ 154 (267)
.++|.|+|.|.||+.+++.|..- |.+|++.++....... ..+. ..+. +.+..+|+|+.+.+...
T Consensus 45 ~ktvgIiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~---~~~~--~~~l~~l~~~~D~v~~~~plt~ 109 (199)
T d1dxya1 45 QQTVGVMGTGHIGQVAIKLFKGF--GAKVIAYDPYPMKGDH---PDFD--YVSLEDLFKQSDVIDLHVPGIE 109 (199)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCSSCC---TTCE--ECCHHHHHHHCSEEEECCCCCG
T ss_pred ceeeeeeeccccccccccccccc--ceeeeccCCccchhhh---cchh--HHHHHHHHHhcccceeeecccc
Confidence 48999999999999999999998 9999999986544321 1121 1222 35678999998877654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.16 E-value=0.0023 Score=50.13 Aligned_cols=90 Identities=13% Similarity=0.168 Sum_probs=61.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CCc---c------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---E------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~---~------~~~~~D~Vi~~a~~ 152 (267)
.+|||.|+ |-+|..+++.++.. |.+|+++++++++.+.+++.|....+ .+. + ...++|+||.+++.
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~--g~~vi~~~~~~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAG 104 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHTTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred CEEEEECCCCCcccccchhhccc--cccceeeecccccccccccccccccccCCccCHHHHHHHHhCCCCEEEEEecccc
Confidence 68999985 99999999999999 99999999988777666666654432 222 1 23579999999873
Q ss_pred CCCCChHHHHHHHHHHhCCCCcEEEEcCCcc
Q 024494 153 SRSLDYPGDVRLAALSWNGEGSFLFTSSSAI 183 (267)
Q Consensus 153 ~~~~~~~~~~~~l~~~~~~v~r~V~~SS~~V 183 (267)
. .+...+.......++|.++....
T Consensus 105 ~-------~~~~~~~~l~~~G~~v~~G~~~~ 128 (183)
T d1pqwa_ 105 E-------AIQRGVQILAPGGRFIELGKKDV 128 (183)
T ss_dssp H-------HHHHHHHTEEEEEEEEECSCGGG
T ss_pred h-------HHHHHHHHhcCCCEEEEEccCCC
Confidence 1 12222222223468888765443
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=96.15 E-value=0.0029 Score=49.60 Aligned_cols=66 Identities=18% Similarity=0.244 Sum_probs=49.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++++|.|.|++|+.+|+.|+.. |.+|+++..+|-+.-+-...|.+.. .-.++++..|++|-+.|-.
T Consensus 24 k~vvV~GYG~vGrG~A~~~rg~--Ga~V~V~E~DPi~alqA~mdGf~v~-~~~~a~~~aDi~vTaTGn~ 89 (163)
T d1v8ba1 24 KIVVICGYGDVGKGCASSMKGL--GARVYITEIDPICAIQAVMEGFNVV-TLDEIVDKGDFFITCTGNV 89 (163)
T ss_dssp SEEEEECCSHHHHHHHHHHHHH--TCEEEEECSCHHHHHHHHTTTCEEC-CHHHHTTTCSEEEECCSSS
T ss_pred CEEEEecccccchhHHHHHHhC--CCEEEEEecCchhhHHHHhcCCccC-chhHccccCcEEEEcCCCC
Confidence 7999999999999999999999 9999999998754322222344432 1124678899988887754
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.14 E-value=0.0036 Score=46.37 Aligned_cols=34 Identities=21% Similarity=0.440 Sum_probs=31.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++|+|+|+|++|..++..|.+. |.+|+.+.+.+.
T Consensus 31 k~vvViGgG~iG~E~A~~l~~~--g~~Vtlie~~~~ 64 (123)
T d1nhpa2 31 NNVVVIGSGYIGIEAAEAFAKA--GKKVTVIDILDR 64 (123)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CEEEEECChHHHHHHHHHhhcc--ceEEEEEEecCc
Confidence 7899999999999999999999 999999988654
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=96.11 E-value=0.0025 Score=51.65 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=30.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|+|+|+|+|.-|...|..|.++ |++|+++.+++
T Consensus 1 m~V~IIGaG~aGL~aA~~L~~~--G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGGGISGLAVAHHLRSR--GTDAVLLESSA 33 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHTT--TCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 7899999999999999999999 99999998864
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.11 E-value=0.0034 Score=49.65 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=31.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|||+|+|+|++|..++..|++..|+.+|+.+.|.+
T Consensus 1 ~KVvIIGgG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 78999999999999999999886678999998754
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.10 E-value=0.0026 Score=43.66 Aligned_cols=43 Identities=19% Similarity=0.397 Sum_probs=36.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG 129 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~ 129 (267)
++|||.|+ |-+|...++.++.. |++|+++++++++.+.+++.|
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~--G~~Vi~~t~s~~k~~~~~~lG 76 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLG 76 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHT
T ss_pred CcEEEEeCCCcHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHHCC
Confidence 68999985 99999999988888 999999999998876655433
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.09 E-value=0.0065 Score=47.74 Aligned_cols=87 Identities=16% Similarity=0.169 Sum_probs=59.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeec----CCc--------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT--------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~----~d~--------~~~~~~D~Vi~~a~ 151 (267)
.+|+|+|+|-||...+..++.. |. +|++.++++++.+..++.|....+ .|. ....++|+||.|++
T Consensus 30 ~~VlV~G~G~iGl~a~~~ak~~--Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~G 107 (174)
T d1e3ia2 30 STCAVFGLGCVGLSAIIGCKIA--GASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 107 (174)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred CEEEEECCChHHHHHHHHHHHh--CCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEecc
Confidence 6899999999999999999999 87 688889988876555556654322 111 12368999999987
Q ss_pred CCCCCChHHHHHHHHHHhCC-CCcEEEEc
Q 024494 152 PSRSLDYPGDVRLAALSWNG-EGSFLFTS 179 (267)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~~~-v~r~V~~S 179 (267)
... .+...+..... ..+++.++
T Consensus 108 ~~~------~~~~a~~~~~~g~G~~v~vG 130 (174)
T d1e3ia2 108 TAQ------TLKAAVDCTVLGWGSCTVVG 130 (174)
T ss_dssp CHH------HHHHHHHTBCTTTCEEEECC
T ss_pred cch------HHHHHHHHhhcCCeEEEecC
Confidence 532 22332222222 36888865
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.07 E-value=0.0025 Score=49.07 Aligned_cols=65 Identities=14% Similarity=0.151 Sum_probs=49.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecC--Cc-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLK--WT-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~--d~-------~~~~~~D~Vi~~a~ 151 (267)
.+|+|.|+|-+|...++.+... |.+|+++++++++.+..++.|.+..+. +. +...+.|.+|.+++
T Consensus 29 ~~vlv~G~G~iG~~a~~~a~~~--g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 29 EWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CEEEEeecccchhhhhHHHhcC--CCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecC
Confidence 6899999999999998888888 999999999988877666677655432 11 12356677777764
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=96.07 E-value=0.0031 Score=51.33 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=32.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
+||+|+|+|..|..++..|.++ |++|+++.|+++
T Consensus 5 ~kV~IiGaG~aGl~~A~~L~~~--G~~v~v~Er~~~ 38 (265)
T d2voua1 5 DRIAVVGGSISGLTAALMLRDA--GVDVDVYERSPQ 38 (265)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 7999999999999999999999 999999998754
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.06 E-value=0.005 Score=45.27 Aligned_cols=35 Identities=20% Similarity=0.427 Sum_probs=32.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.++|+|+|+|+||-.++..|.+. |.+|+.+.+.+.
T Consensus 22 p~~i~IiG~G~ig~E~A~~l~~~--G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIGAGVIGLELGSVWARL--GAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHc--CCceEEEEeecc
Confidence 37899999999999999999999 999999998754
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.06 E-value=0.0036 Score=46.21 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=31.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++++|+|+|++|-.++..|.+. |++|+.+.|.+.
T Consensus 33 ~~vvIiGgG~iG~E~A~~l~~~--g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIGGGFIGLELAGNLAEA--GYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEECSHHHHHHHHHHHHT--TCEEEEECSSSC
T ss_pred CcEEEECCcHHHHHHHHHhhcc--cceEEEEecccc
Confidence 6899999999999999999999 999999998754
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.05 E-value=0.0051 Score=49.02 Aligned_cols=66 Identities=15% Similarity=0.112 Sum_probs=47.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~~~ 155 (267)
..++|.|+|.|.||+.+++.|..- |.+|++.++........ .. ...+. +.+..+|+|+.+++....
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~f--g~~v~~~d~~~~~~~~~---~~--~~~~l~ell~~sDii~i~~plt~~ 109 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESL--GMYVYFYDIENKLPLGN---AT--QVQHLSDLLNMSDVVSLHVPENPS 109 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCCCCCTT---CE--ECSCHHHHHHHCSEEEECCCSSTT
T ss_pred cceEEEEeecccchhhhhhhcccc--cceEeeccccccchhhh---hh--hhhhHHHHHhhccceeecccCCcc
Confidence 348999999999999999999988 99999999865432110 11 11121 356789999888876543
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.05 E-value=0.0032 Score=50.16 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=49.3
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~~ 155 (267)
..+++.|+|.|.||+.+++.+..- |.+|++.++....... ...++... .-.+.+.++|+|+.+.+....
T Consensus 43 ~~k~vgiiG~G~IG~~va~~~~~f--g~~v~~~d~~~~~~~~-~~~~~~~~-~l~ell~~sDiv~~~~Plt~~ 111 (184)
T d1ygya1 43 FGKTVGVVGLGRIGQLVAQRIAAF--GAYVVAYDPYVSPARA-AQLGIELL-SLDDLLARADFISVHLPKTPE 111 (184)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTT--TCEEEEECTTSCHHHH-HHHTCEEC-CHHHHHHHCSEEEECCCCSTT
T ss_pred cceeeeeccccchhHHHHHHhhhc--cceEEeecCCCChhHH-hhcCceec-cHHHHHhhCCEEEEcCCCCch
Confidence 347899999999999999999988 9999999987654322 22233321 111457789999988876543
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.04 E-value=0.0053 Score=48.52 Aligned_cols=89 Identities=18% Similarity=0.213 Sum_probs=61.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CCc--c-----ccCCCCEEEEccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT--E-----ATQKFPYVIFCAPPSR 154 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~--~-----~~~~~D~Vi~~a~~~~ 154 (267)
.+|||.|+ |-+|...++.+... |.+|+++++++++.+.....|.+..+ .+. + .-+++|+||.+++...
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~--Ga~Viat~~s~~k~~~~~~lGa~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~ 110 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGRT 110 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHHTTCSEEEECC---------CCSCCEEEEEECSTTTT
T ss_pred CEEEEEeccchHHHHHHHHHHHc--CCceEEecCchHHHHHHHhcccceeeecchhHHHHHHHhhccCcCEEEEcCCchh
Confidence 67999995 99999999999898 99999999999988776666654332 111 1 2358999999987432
Q ss_pred CCChHHHHHHHHHHhCCCCcEEEEcCCc
Q 024494 155 SLDYPGDVRLAALSWNGEGSFLFTSSSA 182 (267)
Q Consensus 155 ~~~~~~~~~~l~~~~~~v~r~V~~SS~~ 182 (267)
+...+.......|++.++..+
T Consensus 111 -------~~~~l~~l~~~Griv~~G~~~ 131 (176)
T d1xa0a2 111 -------LATVLSRMRYGGAVAVSGLTG 131 (176)
T ss_dssp -------HHHHHHTEEEEEEEEECSCCS
T ss_pred -------HHHHHHHhCCCceEEEeeccc
Confidence 122212222346888877654
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=96.03 E-value=0.0038 Score=47.54 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=30.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+||+|+|+|++|..++..|++..|..+|+.+++++
T Consensus 3 krivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 79999999999999999999984446899998765
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.02 E-value=0.004 Score=46.09 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=30.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.++++|+|+|+||..++..|.+. |.+|+.+.|+
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~l--G~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGI--GLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred CCeEEEECCCccHHHHHHHHhhc--CCeEEEEEec
Confidence 36899999999999999999999 9999999886
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=96.01 E-value=0.0042 Score=46.69 Aligned_cols=34 Identities=24% Similarity=0.293 Sum_probs=31.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++|+|+|+|++|..++..|.+. |.+|+.+.+.+.
T Consensus 36 k~v~VIGgG~iG~E~A~~l~~~--g~~Vtvie~~~~ 69 (133)
T d1q1ra2 36 NRLVVIGGGYIGLEVAATAIKA--NMHVTLLDTAAR 69 (133)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEECCchHHHHHHHHHHhh--Ccceeeeeeccc
Confidence 7899999999999999999999 999999998754
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=95.99 E-value=0.0028 Score=49.22 Aligned_cols=68 Identities=12% Similarity=0.075 Sum_probs=44.2
Q ss_pred CeEEEEcccHHhHH-HHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCc-ccc-CCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWT-EAT-QKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~-La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~-~~~-~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.+|+. ..+.|.+. |+.++.+.+++++....+.+ .++.....|. +.+ .++|+|+.|.++.
T Consensus 2 irvgiiG~G~~~~~~~~~~l~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ll~~~iD~V~I~tp~~ 73 (167)
T d1xeaa1 2 LKIAMIGLGDIAQKAYLPVLAQW-PDIELVLCTRNPKVLGTLATRYRVSATCTDYRDVLQYGVDAVMIHAATD 73 (167)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTS-TTEEEEEECSCHHHHHHHHHHTTCCCCCSSTTGGGGGCCSEEEECSCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHhcccccccccHHHhcccccceeccccccc
Confidence 68999999999976 45565554 57788888887766555432 2332222232 222 4789999887654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=95.99 E-value=0.0042 Score=48.00 Aligned_cols=67 Identities=10% Similarity=0.030 Sum_probs=43.6
Q ss_pred CeEEEEcccHHhHH-HHHHHHhcCCCCeEEEE-eCCCCCchhhhc-cCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~-La~~L~~~~pG~~V~~l-~R~~~~~~~l~~-~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.+|+. ..+.|... |+.+|+++ ++++++...+.+ .++.. ..+. +...++|+|+.|.++.
T Consensus 2 iri~iIG~G~~g~~~~~~~l~~~-~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~~~~~l~~~~D~V~I~tp~~ 72 (164)
T d1tlta1 2 LRIGVVGLGGIAQKAWLPVLAAA-SDWTLQGAWSPTRAKALPICESWRIPY-ADSLSSLAASCDAVFVHSSTA 72 (164)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSC-SSEEEEEEECSSCTTHHHHHHHHTCCB-CSSHHHHHTTCSEEEECSCTT
T ss_pred CEEEEEcCCHHHHHHHHHHHHhC-CCcEEEEEEechhHhhhhhhhcccccc-cccchhhhhhcccccccccch
Confidence 68999999999986 45555543 57887765 577776655432 23322 1222 2357899999887654
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.99 E-value=0.0046 Score=47.67 Aligned_cols=69 Identities=10% Similarity=0.128 Sum_probs=40.5
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC----e-E--EEEeC--CCCCchhhh----cc---Ce---eeecCCccccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC----Q-I--YGQTM--TADHHDELI----NM---GI---TPSLKWTEATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~----~-V--~~l~R--~~~~~~~l~----~~---~v---~~d~~d~~~~~~~D 144 (267)
+||.|+|+ |.+|++++-.|... +. + + ..+.- ..++...+. .. .. ...-.+.+.++++|
T Consensus 5 ~KV~IiGA~G~VG~~~a~~l~~~--~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 82 (154)
T d1y7ta1 5 VRVAVTGAAGQIGYSLLFRIAAG--EMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD 82 (154)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhc--cccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhccccc
Confidence 69999997 99999999999876 43 1 1 11111 111111110 00 01 11112235789999
Q ss_pred EEEEccCCCCC
Q 024494 145 YVIFCAPPSRS 155 (267)
Q Consensus 145 ~Vi~~a~~~~~ 155 (267)
+||.++|..+.
T Consensus 83 vViitaG~~~~ 93 (154)
T d1y7ta1 83 YALLVGAAPRK 93 (154)
T ss_dssp EEEECCCCCCC
T ss_pred EEEeecCcCCC
Confidence 99999996543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.97 E-value=0.0027 Score=48.86 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=43.9
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-CeeeecCCccccCCCCEEEEccCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-GITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
||.++|.|.+|..++++|++. |+.| ...|+.++...+... +.. ....+...++|.++.+.+.
T Consensus 2 kIg~IGlG~MG~~ma~~L~~~--g~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~ 64 (156)
T d2cvza2 2 KVAFIGLGAMGYPMAGHLARR--FPTL-VWNRTFEKALRHQEEFGSE--AVPLERVAEARVIFTCLPT 64 (156)
T ss_dssp CEEEECCSTTHHHHHHHHHTT--SCEE-EECSSTHHHHHHHHHHCCE--ECCGGGGGGCSEEEECCSS
T ss_pred eEEEEeHHHHHHHHHHHHHhC--CCEE-EEeCCHHHHHHHHHHcCCc--ccccccccceeEEEecccc
Confidence 799999999999999999988 8866 567776655444322 222 2223456678999887754
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=95.97 E-value=0.0032 Score=51.83 Aligned_cols=32 Identities=16% Similarity=0.248 Sum_probs=29.9
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.|+|+|+|.+|..+|.+|.++ |++|+++++..
T Consensus 6 DvvIIGaGi~Gls~A~~La~~--G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKE--NKNTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 399999999999999999999 99999999864
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.96 E-value=0.0051 Score=45.57 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=32.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++|+|+|+|++|..++..|.+. |.+|+.+.|.+.
T Consensus 23 k~vvIvGgG~iG~E~A~~l~~~--G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGAGYIAVEMAGILSAL--GSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CEEEEEcCCccHHHHHHHHhcC--CcEEEEEeeccc
Confidence 7899999999999999999999 999999999754
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.94 E-value=0.0038 Score=46.23 Aligned_cols=36 Identities=17% Similarity=0.472 Sum_probs=33.0
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
.++++|+|+|+||..++..|.+. |.+|+.+.|++.-
T Consensus 25 p~~~viiG~G~iglE~A~~~~~~--G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIGAGYIGLEMGSVWGRI--GSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHH--TCEEEEECSSSSS
T ss_pred CCeEEEEccchHHHHHHHHHHhc--CCeEEEEEEcccc
Confidence 37899999999999999999999 9999999997654
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=95.92 E-value=0.0031 Score=49.18 Aligned_cols=66 Identities=15% Similarity=0.203 Sum_probs=51.0
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeee--ecCCcc---------ccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITP--SLKWTE---------ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~--d~~d~~---------~~~~~D~Vi~~a~~ 152 (267)
.+|||.|+ |-+|..+++.++.. |.+|+++++++++.+.+++.|.+. +..+++ .-.++|+|+.+++.
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~--Ga~Vi~~~~s~~k~~~~~~lGa~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~ 107 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGR 107 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEECSCG
T ss_pred CEEEEEccccccchHHHHHHHHh--CCeEeecccchHHHHHHHhcCCeEEEECCCCCHHHHHHHHhCCCCeEEEEeCccH
Confidence 68999975 89999999999998 999999999998877766666543 223321 23568999998864
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=95.92 E-value=0.0055 Score=42.10 Aligned_cols=37 Identities=19% Similarity=0.399 Sum_probs=33.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
||+|.|+|.|.+|+-++.+-.+- |++|.+++.+++..
T Consensus 1 ~k~vgIlG~GQLgrMl~~Aa~~L--G~~v~vldp~~~~p 37 (78)
T d3etja2 1 MKQVCVLGNGQLGRMLRQAGEPL--GIAVWPVGLDAEPA 37 (78)
T ss_dssp CEEEEEEBCSHHHHHHHHHHGGG--TEEEEEECTTSCGG
T ss_pred CCEEEEEcCCHHHHHHHHHHHHc--CCEEEEEcCCCCCc
Confidence 58899999999999999999999 99999999876543
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.89 E-value=0.0043 Score=48.36 Aligned_cols=34 Identities=15% Similarity=0.080 Sum_probs=31.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~ 120 (267)
+||+|+|+|..|...|..|.+. |+ +|+++.|.+.
T Consensus 5 ~kVaIIGaGpaGl~aA~~l~~~--G~~~V~v~E~~~~ 39 (196)
T d1gtea4 5 AKIALLGAGPASISCASFLARL--GYSDITIFEKQEY 39 (196)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEEESSSS
T ss_pred CEEEEECChHHHHHHHHHHHHC--CCCeEEEEEecCc
Confidence 7999999999999999999999 98 5999998754
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=95.88 E-value=0.013 Score=43.93 Aligned_cols=51 Identities=20% Similarity=0.243 Sum_probs=36.9
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
|||.|.|+ |.+|+.+++.+.++ |+++.+-.- ....+.+.++|+||....|.
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~--~~~l~~~id----------------~~~~~~~~~~DVvIDFS~p~ 52 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEK--GHELVLKVD----------------VNGVEELDSPDVVIDFSSPE 52 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHT--TCEEEEEEE----------------TTEEEECSCCSEEEECSCGG
T ss_pred CEEEEECCCCHHHHHHHHHHhcC--CCeEEEEEC----------------CCcHHHhccCCEEEEecCHH
Confidence 68999996 99999999988888 998765321 11112456789999765554
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.84 E-value=0.014 Score=45.64 Aligned_cols=87 Identities=21% Similarity=0.242 Sum_probs=59.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeec----CCc--------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL----KWT--------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~----~d~--------~~~~~~D~Vi~~a~ 151 (267)
.+|+|.|+|-+|...++.+... |. +|++.++++++.+..++.|.+..+ .|. ..-.++|+||.+++
T Consensus 29 ~~VlV~GaGgvGl~a~~~ak~~--G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~~g 106 (174)
T d1p0fa2 29 STCAVFGLGGVGFSAIVGCKAA--GASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 106 (174)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCchhHHHHHHHHHc--CCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEcCC
Confidence 6899999999999999999999 86 799999998887666666655432 121 12257999999987
Q ss_pred CCCCCChHHHHHHHHHHh-CCCCcEEEEc
Q 024494 152 PSRSLDYPGDVRLAALSW-NGEGSFLFTS 179 (267)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~-~~v~r~V~~S 179 (267)
... .....+... .+..++++++
T Consensus 107 ~~~------~~~~~~~~~~~~~G~~v~vG 129 (174)
T d1p0fa2 107 RIE------TMMNALQSTYCGSGVTVVLG 129 (174)
T ss_dssp CHH------HHHHHHHTBCTTTCEEEECC
T ss_pred Cch------HHHHHHHHHHHhcCceEEEE
Confidence 531 233332222 2346777765
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.84 E-value=0.01 Score=46.04 Aligned_cols=67 Identities=15% Similarity=0.195 Sum_probs=50.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhccCeeeecC-----Cc-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSLK-----WT-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~~v~~d~~-----d~-------~~~~~~D~Vi~~a~ 151 (267)
.+|+|.|+|-+|...+..++.. | .+|++.++++++.+...+.+....+. +. ....++|+||.+.+
T Consensus 30 dtVlV~GaGG~G~~~~~~~~~~--g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~~G 107 (176)
T d2jhfa2 30 STCAVFGLGGVGLSVIMGCKAA--GAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 107 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEECCCCcHHHHHHHHHHc--CCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEecCC
Confidence 6799999988999999999988 7 58999999998877666666543321 11 12358999999987
Q ss_pred CC
Q 024494 152 PS 153 (267)
Q Consensus 152 ~~ 153 (267)
..
T Consensus 108 ~~ 109 (176)
T d2jhfa2 108 RL 109 (176)
T ss_dssp CH
T ss_pred ch
Confidence 64
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.82 E-value=0.0049 Score=52.83 Aligned_cols=35 Identities=26% Similarity=0.427 Sum_probs=32.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++||+|+|+|+-|...|..|.++ |++|+++.++..
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~--G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEK--GHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTT--TCEEEEEESSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhC--CCCEEEEECCCC
Confidence 58999999999999999999999 999999988754
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.81 E-value=0.0094 Score=46.77 Aligned_cols=87 Identities=17% Similarity=0.216 Sum_probs=59.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeec--C---Cc-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL--K---WT-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~--~---d~-------~~~~~~D~Vi~~a~ 151 (267)
..|+|+|+|-+|...++.+... |. +|+++++++++.+.-++.|.+..+ . +. ....++|+||.+.+
T Consensus 31 ~tVlI~G~GgvGl~ai~~ak~~--G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g 108 (176)
T d1d1ta2 31 STCVVFGLGGVGLSVIMGCKSA--GASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIG 108 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSC
T ss_pred CEEEEECCCchhHHHHHHHHHc--CCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCC
Confidence 5799999999999999999998 85 899999999887655555554322 1 11 12368999999987
Q ss_pred CCCCCChHHHHHHHHHHh-CCCCcEEEEc
Q 024494 152 PSRSLDYPGDVRLAALSW-NGEGSFLFTS 179 (267)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~-~~v~r~V~~S 179 (267)
... ..+...... .+..++|+++
T Consensus 109 ~~~------~~~~a~~~~~~~~G~~v~vG 131 (176)
T d1d1ta2 109 HLE------TMIDALASCHMNYGTSVVVG 131 (176)
T ss_dssp CHH------HHHHHHTTSCTTTCEEEECS
T ss_pred chH------HHHHHHHHhhcCCeEEEEEE
Confidence 642 122221112 2346888866
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.79 E-value=0.0044 Score=48.68 Aligned_cols=68 Identities=16% Similarity=0.192 Sum_probs=49.0
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhcc-----Ce----eeecCCc-cccCCCCEEEEccCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINM-----GI----TPSLKWT-EATQKFPYVIFCAPP 152 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~-----~v----~~d~~d~-~~~~~~D~Vi~~a~~ 152 (267)
..++|||+|+|-.+++++..|.+. | +|+++.|+.++.+.+... .. .....+. .....+|.||+|.+.
T Consensus 17 ~~k~vlIlGaGG~arai~~aL~~~--~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~ 93 (177)
T d1nvta1 17 KDKNIVIYGAGGAARAVAFELAKD--N-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 93 (177)
T ss_dssp CSCEEEEECCSHHHHHHHHHHTSS--S-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred CCCEEEEECCcHHHHHHHHHHccc--c-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence 347999999999999999999766 6 999999998877655321 00 1122222 345789999999875
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 94 g 94 (177)
T d1nvta1 94 G 94 (177)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.76 E-value=0.013 Score=46.68 Aligned_cols=44 Identities=18% Similarity=0.365 Sum_probs=38.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMG 129 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~ 129 (267)
.-+|+|+|+|..|..-++-.+.- |.+|+++|.+++..+++...+
T Consensus 29 pa~VvViGaGvaG~~Aa~~A~~l--GA~V~v~D~~~~~~~~l~~l~ 72 (183)
T d1l7da1 29 PARVLVFGVGVAGLQAIATAKRL--GAVVMATDVRAATKEQVESLG 72 (183)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCSTTHHHHHHTT
T ss_pred CcEEEEEcCcHHHHHHHHHHHHc--CCEEEEEeccHHHHHHHHHhh
Confidence 36899999999999999999999 999999999998887776544
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=95.76 E-value=0.0049 Score=49.70 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=31.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|||+|+|+|.-|...|.+|.+. |++|+++.+++
T Consensus 2 KkV~IIGaG~aGL~aA~~La~~--G~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIGAGVSGLAAAYKLKIH--GLNVTVFEAEG 34 (373)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--SCEEEEECSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 7899999999999999999999 99999998764
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.75 E-value=0.0069 Score=46.68 Aligned_cols=68 Identities=16% Similarity=0.125 Sum_probs=38.5
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcC-CCCeEEEEeCCCCCchhhhccCee--eecCCccccCCCCEEEEccCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEH-PGCQIYGQTMTADHHDELINMGIT--PSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~-pG~~V~~l~R~~~~~~~l~~~~v~--~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
||.|+|+ ||+|+.|++.|.++. |..++..++.+......+....-. ..........+.|.++.+++..
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~~~~~~~d~~f~~~~~~ 74 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSS 74 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCTTTTTTCSEEEECSCHH
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccchhhhhhhhhhhhccCcc
Confidence 7999997 999999998876651 233555554322211111111111 1112224567889999887653
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.73 E-value=0.0042 Score=51.58 Aligned_cols=34 Identities=18% Similarity=0.251 Sum_probs=31.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.+|+|+|+|..|..++..|.+. |++|+++.+.++
T Consensus 3 ~~V~IvGaGp~Gl~~A~~L~~~--G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGAGPSGLLLGQLLHKA--GIDNVILERQTP 36 (292)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSSCH
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCCEEEEeCCCC
Confidence 4799999999999999999999 999999998763
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.73 E-value=0.0068 Score=47.06 Aligned_cols=68 Identities=13% Similarity=0.156 Sum_probs=41.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEE-eCCCCCch-h-hhccCeeeecCCc------cccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHD-E-LINMGITPSLKWT------EATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~-~-l~~~~v~~d~~d~------~~~~~~D~Vi~~a~~ 152 (267)
.||.|+|+|.+|+.+...++++.|..+++++ +|+++... . ..+.++.....+. ....++|+||.+.+.
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpa 81 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA 81 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccccceeeeeecccccccCEEEEcCCc
Confidence 5899999999998654444455567788887 46654322 1 1234544332211 134579999998754
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.68 E-value=0.011 Score=45.63 Aligned_cols=67 Identities=18% Similarity=0.254 Sum_probs=48.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeec--C---Cc-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL--K---WT-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~--~---d~-------~~~~~~D~Vi~~a~ 151 (267)
.+|||.|+|-+|...++.+... |. .|++.++++++.+..++.|.+..+ . +. ....++|+||.+++
T Consensus 30 ~tVlI~GaGGvG~~aiq~ak~~--G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~~G 107 (176)
T d2fzwa2 30 SVCAVFGLGGVGLAVIMGCKVA--GASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIG 107 (176)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred CEEEEecchhHHHHHHHHHHHH--hcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeecCC
Confidence 6899999988999999999998 85 677777887776655556654332 1 11 12357999999987
Q ss_pred CC
Q 024494 152 PS 153 (267)
Q Consensus 152 ~~ 153 (267)
..
T Consensus 108 ~~ 109 (176)
T d2fzwa2 108 NV 109 (176)
T ss_dssp CH
T ss_pred CH
Confidence 53
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.59 E-value=0.01 Score=42.67 Aligned_cols=64 Identities=16% Similarity=0.128 Sum_probs=40.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchh-h--hc-cCe-ee-------ecCCccccCCCCEEEEc
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDE-L--IN-MGI-TP-------SLKWTEATQKFPYVIFC 149 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~-l--~~-~~v-~~-------d~~d~~~~~~~D~Vi~~ 149 (267)
-++|+|+|+|.-|.-++..|.+. .-+|+...|++..... . .. ..+ +. ...|-..+.++|.||+|
T Consensus 32 gK~VlVVG~g~Sa~dia~~l~~~--ak~v~~~~~r~~~~~~~~~~~~~~~i~~~~~~~~~v~~~dG~~~~~vD~Ii~C 107 (107)
T d2gv8a2 32 GESVLVVGGASSANDLVRHLTPV--AKHPIYQSLLGGGDIQNESLQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYC 107 (107)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTT--SCSSEEEECTTCCSCBCSSEEEECCEEEEETTTTEEEETTTEEECCCSEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHHh--cCEEEEEEecCccccccccceecCCeeEEecCCCEEEEcCCCEEeCCCEEEEC
Confidence 38999999999999999999887 6566656654432211 0 00 011 11 11222456789999998
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=95.59 E-value=0.011 Score=46.43 Aligned_cols=68 Identities=15% Similarity=0.107 Sum_probs=48.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhc--------cCeee---ecCCc----cccCCCCEEE
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELIN--------MGITP---SLKWT----EATQKFPYVI 147 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~--------~~v~~---d~~d~----~~~~~~D~Vi 147 (267)
.++|+|+|+|-.|++++..|.+. |. +++...|++++.+.+.. ..... ++.+. +.+..+|.||
T Consensus 18 ~k~vlIlGaGGaarai~~al~~~--g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diiI 95 (182)
T d1vi2a1 18 GKTMVLLGAGGASTAIGAQGAIE--GLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 95 (182)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCcHHHHHHHHHHhhc--CCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhcccceec
Confidence 37999999999999999999998 76 78899998876654321 11111 22222 2456899999
Q ss_pred EccCCC
Q 024494 148 FCAPPS 153 (267)
Q Consensus 148 ~~a~~~ 153 (267)
+|.+..
T Consensus 96 N~Tp~G 101 (182)
T d1vi2a1 96 NGTKVG 101 (182)
T ss_dssp ECSSTT
T ss_pred cccCCc
Confidence 998764
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.57 E-value=0.0082 Score=44.63 Aligned_cols=35 Identities=23% Similarity=0.411 Sum_probs=32.3
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.++++|+|+|+||..++..|.+. |.+|+.+.+.+.
T Consensus 26 p~~vvIiGgG~IG~E~A~~~~~~--G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIGGGIIGLEMGTVYSTL--GSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHhhcC--CCEEEEEEeecc
Confidence 37899999999999999999999 999999998764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.0054 Score=52.06 Aligned_cols=35 Identities=20% Similarity=0.361 Sum_probs=32.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
|.+|+|+|+|+-|..+|++|.+. |++|.++.+++.
T Consensus 1 M~dv~IIGaG~sGl~~A~~L~~~--g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVGSGLFGAVCANELKKL--NKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGG--TCCEEEECSSSS
T ss_pred CccEEEECCcHHHHHHHHHHHhC--CCcEEEEECCCC
Confidence 57899999999999999999999 999999988654
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.54 E-value=0.0088 Score=47.79 Aligned_cols=67 Identities=12% Similarity=0.076 Sum_probs=50.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeecC--Cc-------c--ccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSLK--WT-------E--ATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~~--d~-------~--~~~~~D~Vi~~a~~ 152 (267)
.+|||+|+|.+|...+..++.. |. +|++.++++++.+..++.|....+. +. + ...++|++|.+.+.
T Consensus 27 ~tVlV~GaG~vGl~a~~~ak~~--ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~i~~~t~g~g~D~vid~vG~ 104 (195)
T d1kola2 27 STVYVAGAGPVGLAAAASARLL--GAAVVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGF 104 (195)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCEEEETTSSSCHHHHHHHHHSSSCEEEEEECCCT
T ss_pred CEEEEECcCHHHHHHHHHHHhh--cccceeeecccchhhHhhhhccccEEEeCCCcCHHHHHHHHhCCCCcEEEEECccc
Confidence 6899999999998888888777 65 8999999888776666666655331 11 1 23579999999984
Q ss_pred C
Q 024494 153 S 153 (267)
Q Consensus 153 ~ 153 (267)
.
T Consensus 105 ~ 105 (195)
T d1kola2 105 E 105 (195)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=95.47 E-value=0.0097 Score=49.02 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=31.6
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.+||+|+|+|..|...|..|.++ |++|+++.+++
T Consensus 30 pkkV~IIGaG~aGLsaA~~L~~~--G~~V~vlE~~~ 63 (370)
T d2iida1 30 PKHVVIVGAGMAGLSAAYVLAGA--GHQVTVLEASE 63 (370)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHH--TCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHC--CCCEEEEeCCC
Confidence 37999999999999999999999 99999999864
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.38 E-value=0.02 Score=43.92 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=41.8
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCC-------eEEEEeCCCCC--chhhh----cc---Ce-eeec--CCccccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGC-------QIYGQTMTADH--HDELI----NM---GI-TPSL--KWTEATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~-------~V~~l~R~~~~--~~~l~----~~---~v-~~d~--~d~~~~~~~D 144 (267)
+||.|+|+ |.+|++++-.|... +. ++..++.+... ...+. .. .. .... .+.+.+.++|
T Consensus 4 ~KV~IiGA~G~VG~~la~~l~~~--~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 81 (154)
T d5mdha1 4 IRVLVTGAAGQIAYSLLYSIGNG--SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (154)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred eEEEEECCCCHHHHHHHHHHHHH--HhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence 79999996 99999999999764 31 34445443322 11111 00 00 1111 2235789999
Q ss_pred EEEEccCCCC
Q 024494 145 YVIFCAPPSR 154 (267)
Q Consensus 145 ~Vi~~a~~~~ 154 (267)
+||.+++..+
T Consensus 82 vVVitag~~~ 91 (154)
T d5mdha1 82 VAILVGSMPR 91 (154)
T ss_dssp EEEECCSCCC
T ss_pred EEEEecccCC
Confidence 9999999654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=95.37 E-value=0.011 Score=46.58 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=59.7
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeec--CCc---ccc--CCCCEEEEccCCCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSL--KWT---EAT--QKFPYVIFCAPPSRSL 156 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~--~d~---~~~--~~~D~Vi~~a~~~~~~ 156 (267)
.+|||.|+ |-+|...++..+.. |.+|+++++++++.+.++..|.+..+ .+. +.+ ...|.||.+++..
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~--Ga~Via~~~~~~k~~~~~~lGad~vi~~~~~~~~~~l~~~~~~~vvD~Vgg~--- 107 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKL--GYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDK--- 107 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHHHTEEEEEEGGGSSSCCSSCCCCEEEEEESSCHH---
T ss_pred CcEEEEEccccchHHHHHHHHHc--CCCeEEEecchhHHHHHHhhccccccccccHHHHHHHHhhcCCeeEEEcchH---
Confidence 47999985 99999999999998 99999999999988767666665432 222 122 3468888887531
Q ss_pred ChHHHHHHHHHHhCCCCcEEEEcCCc
Q 024494 157 DYPGDVRLAALSWNGEGSFLFTSSSA 182 (267)
Q Consensus 157 ~~~~~~~~l~~~~~~v~r~V~~SS~~ 182 (267)
.....+.....-.++|.++...
T Consensus 108 ----~~~~~l~~l~~~Griv~~G~~~ 129 (177)
T d1o89a2 108 ----VLAKVLAQMNYGGCVAACGLAG 129 (177)
T ss_dssp ----HHHHHHHTEEEEEEEEECCCTT
T ss_pred ----HHHHHHHHhccccceEeecccC
Confidence 1222212222346888876544
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=95.35 E-value=0.049 Score=42.68 Aligned_cols=69 Identities=7% Similarity=0.063 Sum_probs=42.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC-------CeEEEEeCCCCCc--hhh----hcc---Ceee-e-cCC-ccccCCCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-------CQIYGQTMTADHH--DEL----INM---GITP-S-LKW-TEATQKFP 144 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG-------~~V~~l~R~~~~~--~~l----~~~---~v~~-d-~~d-~~~~~~~D 144 (267)
.||.|+|+ |.||++++-.|... + .++..++...... ..+ ... .... . -.+ .+++.++|
T Consensus 25 ~kV~I~GA~G~Ig~~l~~~La~g--~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aD 102 (175)
T d7mdha1 25 VNIAVSGAAGMISNHLLFKLASG--EVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVD 102 (175)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT--TTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred cEEEEECCCcHHHHHHHHHHHcC--cccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccchhhccCCc
Confidence 47999996 99999999999864 2 1445555443211 111 110 0111 1 122 35789999
Q ss_pred EEEEccCCCCC
Q 024494 145 YVIFCAPPSRS 155 (267)
Q Consensus 145 ~Vi~~a~~~~~ 155 (267)
+||.+++..+.
T Consensus 103 vVvi~ag~~rk 113 (175)
T d7mdha1 103 WALLIGAKPRG 113 (175)
T ss_dssp EEEECCCCCCC
T ss_pred eEEEeeccCCC
Confidence 99999987653
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.34 E-value=0.011 Score=42.97 Aligned_cols=34 Identities=12% Similarity=0.058 Sum_probs=31.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
++|+|+|.|++|..++..|.+. |.+|+.+.|.+.
T Consensus 23 ~~vvVvGgG~ig~E~A~~l~~~--g~~vt~i~~~~~ 56 (121)
T d1mo9a2 23 STVVVVGGSKTAVEYGCFFNAT--GRRTVMLVRTEP 56 (121)
T ss_dssp SEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHhc--chhheEeeccch
Confidence 7899999999999999999999 999999999754
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.34 E-value=0.015 Score=47.97 Aligned_cols=69 Identities=10% Similarity=0.094 Sum_probs=49.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhc-cCeeeecCCccccCCCCEEEEccCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELIN-MGITPSLKWTEATQKFPYVIFCAPPSR 154 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~-~~v~~d~~d~~~~~~~D~Vi~~a~~~~ 154 (267)
-++|+|-|.|.+|+++++.|.+. |.+|++.+.+......+.. .+....-.+.....+||+++-||-...
T Consensus 39 g~~v~IqG~GnVG~~~a~~L~~~--Gakvv~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~cDIl~PcA~~~~ 108 (230)
T d1leha1 39 GLAVSVQGLGNVAKALCKKLNTE--GAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALGAV 108 (230)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSCSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEeecccHHHHHHHHHhcCCcccCCcccccccccEecccccccc
Confidence 38999999999999999999999 9999999877655443322 233222122223467999999987543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.30 E-value=0.01 Score=45.98 Aligned_cols=67 Identities=12% Similarity=0.119 Sum_probs=48.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeee--cCC-c-----c--ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPS--LKW-T-----E--ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d--~~d-~-----~--~~~~~D~Vi~~a~~~ 153 (267)
.+|+|.|+|.+|...++.++.. |. .|++.++++++.+..++.+.... ..+ . + ...++|+||.+++..
T Consensus 34 ~~vli~GaG~vG~~~~~~a~~~--g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~~ 111 (172)
T d1h2ba2 34 AYVAIVGVGGLGHIAVQLLKVM--TPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQ 111 (172)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--CCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCCH
T ss_pred CEEEEeCCChHHHHHHHHHHhh--cCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCcc
Confidence 6799999999999999999888 75 77888888877666555554322 221 1 1 235799999998753
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.27 E-value=0.0092 Score=46.49 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=47.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhhhccCeee--ecCCc---c---c--cCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELINMGITP--SLKWT---E---A--TQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l~~~~v~~--d~~d~---~---~--~~~~D~Vi~~a~~~ 153 (267)
.+|+|+|+|.+|...++.++.. |.+ |++.++++++.+..++.|... +..+. + . -.++|+||.|.+..
T Consensus 30 ~~VlI~G~G~iG~~~~~~ak~~--g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G~~ 107 (174)
T d1f8fa2 30 SSFVTWGAGAVGLSALLAAKVC--GASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSP 107 (174)
T ss_dssp CEEEEESCSHHHHHHHHHHHHH--TCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSCCH
T ss_pred CEEEEeCCCHHHhhhhhccccc--ccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCCcH
Confidence 6899999999999999999888 875 556677777665555555432 22222 1 1 23699999998753
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.14 E-value=0.0016 Score=52.38 Aligned_cols=26 Identities=19% Similarity=0.327 Sum_probs=24.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeE
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQI 112 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V 112 (267)
|||+|+|+|.+|...|.+|.++ |++|
T Consensus 1 mkV~VIGaGi~GlstA~~L~~~--G~~v 26 (246)
T d1kifa1 1 MRVVVIGAGVIGLSTALCIHER--YHSV 26 (246)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--HTTT
T ss_pred CEEEEECchHHHHHHHHHHHHC--CCCc
Confidence 7899999999999999999999 8754
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=95.08 E-value=0.012 Score=46.01 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=30.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~ 120 (267)
.+|+|+|+|.-|...|..|.++ |+ +|+++.+++.
T Consensus 1 P~V~IIGaG~aGL~aA~~L~~~--G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 1 PRVIVVGAGMSGISAAKRLSEA--GITDLLILEATDH 35 (347)
T ss_dssp CCEEEECCBHHHHHHHHHHHHT--TCCCEEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhC--CCCcEEEEECCCC
Confidence 3799999999999999999999 95 7999988653
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=95.03 E-value=0.01 Score=46.14 Aligned_cols=70 Identities=11% Similarity=0.058 Sum_probs=44.0
Q ss_pred CeEEEEcccHHhHHHHHH-HHhc---CCCCeEEEEeCCCCCchhhhc-------cCeeee--cCCccccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQ-WRQE---HPGCQIYGQTMTADHHDELIN-------MGITPS--LKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~-L~~~---~pG~~V~~l~R~~~~~~~l~~-------~~v~~d--~~d~~~~~~~D~Vi~~a~ 151 (267)
|||.|+|+|-+|..++-. |+.. .+..++..+|.++++...... ...... ..+.++++++|+||.+++
T Consensus 1 mKIaiIGaGs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita~ 80 (162)
T d1up7a1 1 MRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQFR 80 (162)
T ss_dssp CEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEecc
Confidence 789999999788666533 3222 113589999998766532111 111111 222367899999999998
Q ss_pred CCC
Q 024494 152 PSR 154 (267)
Q Consensus 152 ~~~ 154 (267)
..+
T Consensus 81 ~~~ 83 (162)
T d1up7a1 81 PGG 83 (162)
T ss_dssp TTH
T ss_pred cCC
Confidence 753
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.01 E-value=0.011 Score=45.50 Aligned_cols=66 Identities=18% Similarity=0.249 Sum_probs=49.2
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhccCeeeec--CCc-------c--ccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITPSL--KWT-------E--ATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~~v~~d~--~d~-------~--~~~~~D~Vi~~a~ 151 (267)
.+|+|+|+ |-+|...+..+... | .+|+++++++++.+.+++.|....+ .+. + ...++|+||.|++
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~--g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g 106 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAV--SGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 106 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHH--TCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CEEEEEeccccceeeeeeccccc--ccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence 68999995 99999999999988 7 5899999998877666666653322 221 1 2356999999986
Q ss_pred C
Q 024494 152 P 152 (267)
Q Consensus 152 ~ 152 (267)
.
T Consensus 107 ~ 107 (170)
T d1jvba2 107 S 107 (170)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=94.96 E-value=0.011 Score=49.25 Aligned_cols=33 Identities=21% Similarity=0.408 Sum_probs=29.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~ 119 (267)
.+|+|+|+|.+|..+|.+|.++ |+ +|++++|++
T Consensus 2 ~dViIIGaGi~G~s~A~~La~~--G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGAGIVGTNLADELVTR--GWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT--TCCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHc--CCCcEEEEeCCC
Confidence 4799999999999999999999 86 799999864
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.86 E-value=0.013 Score=45.54 Aligned_cols=33 Identities=12% Similarity=0.342 Sum_probs=30.4
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.|+|+|+|.-|...|..|.++ |++|.++.+++.
T Consensus 7 DviViGaG~~Gl~~A~~La~~--G~~V~vlE~~~~ 39 (297)
T d2bcgg1 7 DVIVLGTGITECILSGLLSVD--GKKVLHIDKQDH 39 (297)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCCEEEEcCCCC
Confidence 489999999999999999999 999999999753
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.84 E-value=0.017 Score=46.76 Aligned_cols=34 Identities=26% Similarity=0.348 Sum_probs=31.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~ 120 (267)
++|+|+|+|..|..++..|.+. |. +|+++.|.++
T Consensus 2 ~~V~IvGaG~aGl~~A~~L~~~--Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGAGIGGLSCALALHQA--GIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESSSS
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCCeEEEEeCCCC
Confidence 7899999999999999999999 95 8999998764
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.84 E-value=0.014 Score=49.75 Aligned_cols=37 Identities=19% Similarity=0.136 Sum_probs=31.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
|++|+|+|+|.-|...+..|+++..+++|+++.|+..
T Consensus 4 ~KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 6899999999999999999988722369999998754
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.67 E-value=0.03 Score=45.17 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=32.1
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.++|+|+|+|+.|...+..|.++ |++|+.+.++.+
T Consensus 49 ~k~VvIIGaGpAGl~aA~~l~~~--G~~v~l~E~~~~ 83 (233)
T d1djqa3 49 KDSVLIVGAGPSGSEAARVLMES--GYTVHLTDTAEK 83 (233)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSSS
T ss_pred CceEEEEcccHHHHHHHHHHHHh--ccceeeEeeccc
Confidence 38999999999999999999999 999999988654
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.65 E-value=0.042 Score=42.24 Aligned_cols=67 Identities=13% Similarity=0.220 Sum_probs=50.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCCCCchhhhccCeeeec--CC---c-------cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTADHHDELINMGITPSL--KW---T-------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~~~~~~l~~~~v~~d~--~d---~-------~~~~~~D~Vi~~a~ 151 (267)
.+|+|+|+|-+|...+..+... |. +|+++++++++.+..++.|.+..+ .+ . ....++|+|+.+++
T Consensus 30 ~~VlI~G~Gg~g~~~~~~~~~~--g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~~G 107 (175)
T d1cdoa2 30 STCAVFGLGAVGLAAVMGCHSA--GAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 107 (175)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred CEEEEEecCCccchHHHHHHHH--hhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeeecC
Confidence 6799999988999988888887 54 799999999888766667754432 11 1 12357999999987
Q ss_pred CC
Q 024494 152 PS 153 (267)
Q Consensus 152 ~~ 153 (267)
..
T Consensus 108 ~~ 109 (175)
T d1cdoa2 108 NV 109 (175)
T ss_dssp CH
T ss_pred CH
Confidence 53
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.61 E-value=0.014 Score=45.91 Aligned_cols=69 Identities=20% Similarity=0.300 Sum_probs=44.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC-CCCCc-hhhhccCeeeec--CC----------------ccccCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHH-DELINMGITPSL--KW----------------TEATQKF 143 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R-~~~~~-~~l~~~~v~~d~--~d----------------~~~~~~~ 143 (267)
|++|.|-|.|.||+.+.+.|.++ |+.+|+++.- .+... ..+...+..... .+ .+...++
T Consensus 1 M~~VgINGfGRIGR~v~R~l~~~-~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAINGYGTVGKRVADAIAQQ-DDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTS-SSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEcCcHHHHHHHHHHHhC-CCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 68999999999999999998877 4678887754 33221 111112211110 00 1245689
Q ss_pred CEEEEccCCC
Q 024494 144 PYVIFCAPPS 153 (267)
Q Consensus 144 D~Vi~~a~~~ 153 (267)
|+|+-|.|..
T Consensus 80 DvViEcTG~f 89 (171)
T d1cf2o1 80 DIVIDCTPEG 89 (171)
T ss_dssp SEEEECCSTT
T ss_pred CEEEEccCCC
Confidence 9999998875
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.60 E-value=0.024 Score=45.90 Aligned_cols=34 Identities=24% Similarity=0.333 Sum_probs=30.8
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
..||+|+|+|.-|...|.+|.++ |++|+++-.+.
T Consensus 5 ~~kViVIGaG~aGL~aA~~L~~~--G~~V~VlEa~~ 38 (449)
T d2dw4a2 5 TGKVIIIGSGVSGLAAARQLQSF--GMDVTLLEARD 38 (449)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHT--TCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhC--CCCEEEEeCCC
Confidence 36899999999999999999999 99999997653
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.43 E-value=0.0098 Score=46.61 Aligned_cols=68 Identities=13% Similarity=0.130 Sum_probs=44.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEE-eCCCCCchhhhc-cCeee---ecCCcc---ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITP---SLKWTE---ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l-~R~~~~~~~l~~-~~v~~---d~~d~~---~~~~~D~Vi~~a~~~ 153 (267)
+||.|+|+|.+|+..++.|... |+.+|+++ ++++++...+.. .++.. ...|.+ .-.++|+|+.+.++.
T Consensus 2 iki~iIG~G~~g~~~~~~l~~~-~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~iD~v~I~tp~~ 77 (184)
T d1ydwa1 2 IRIGVMGCADIARKVSRAIHLA-PNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLEDPEIDALYVPLPTS 77 (184)
T ss_dssp EEEEEESCCTTHHHHHHHHHHC-TTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHCTTCCEEEECCCGG
T ss_pred eEEEEEcCCHHHHHHHHHHHhC-CCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhccccceeeecccch
Confidence 5899999999999999999775 47898865 666655443322 23221 122321 235799999887654
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=94.32 E-value=0.025 Score=45.18 Aligned_cols=36 Identities=17% Similarity=0.203 Sum_probs=31.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.||.|+|+|.-|...|..|++...|++|+++.+.+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 589999999999999999987645899999998754
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=94.29 E-value=0.021 Score=46.95 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=29.8
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.|+|+|+|..|..+|.+|.++ |++|+++.+..
T Consensus 5 DvvIIGaGi~Gls~A~~La~~--G~~V~viE~~~ 36 (281)
T d2gf3a1 5 DVIVVGAGSMGMAAGYQLAKQ--GVKTLLVDAFD 36 (281)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 499999999999999999999 99999999853
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=94.00 E-value=0.022 Score=43.60 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=28.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
++|+|+|+|++|-.++..|.+. |.+|+.+.+.
T Consensus 4 ~~VvIIGgG~~G~e~A~~l~~~--g~~v~v~~~~ 35 (185)
T d1q1ra1 4 DNVVIVGTGLAGVEVAFGLRAS--GWEGNIRLVG 35 (185)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCSEEEEEC
T ss_pred CCEEEECCcHHHHHHHHHHHHc--CCceEEEEec
Confidence 6899999999999999999999 8887766544
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.84 E-value=0.032 Score=42.15 Aligned_cols=32 Identities=22% Similarity=0.240 Sum_probs=27.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.||+|+|+|++|-.++..|. + +.+|+.+.+.+
T Consensus 1 ~rVvIIGgG~~G~e~A~~l~-~--~~~Vtvv~~~~ 32 (167)
T d1xhca1 1 SKVVIVGNGPGGFELAKQLS-Q--TYEVTVIDKEP 32 (167)
T ss_dssp CEEEEECCSHHHHHHHHHHT-T--TSEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHH-c--CCCEEEEeccc
Confidence 37999999999999999985 4 67999998753
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=93.83 E-value=0.016 Score=44.87 Aligned_cols=32 Identities=19% Similarity=0.242 Sum_probs=26.5
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEe
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQT 116 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~ 116 (267)
|..+|+|+|+|++|-.++..|++. |.+|..+.
T Consensus 2 m~a~VvIIGgG~~G~e~A~~l~~~--g~~v~i~~ 33 (183)
T d1d7ya1 2 LKAPVVVLGAGLASVSFVAELRQA--GYQGLITV 33 (183)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHH--TCCSCEEE
T ss_pred CCCCEEEECccHHHHHHHHHHHhc--CCceEEEE
Confidence 346799999999999999999999 77655443
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.77 E-value=0.25 Score=36.77 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=36.5
Q ss_pred eEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 86 DLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 86 ~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
||.|.|+ |.+|+.+++.+.+. +++++.+..-..+....+ ...++|+||....|.
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~-~~~~l~~~~d~~~~~~~~-------------~~~~~DvvIDFS~p~ 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAA-DDLTLSAELDAGDPLSLL-------------TDGNTEVVIDFTHPD 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHS-TTSEEEEEECTTCCTHHH-------------HTTTCSEEEECCCTT
T ss_pred CEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecCCchhhh-------------ccccCCEEEEcccHH
Confidence 6899996 99999999998776 378877543221111111 235789999876554
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.77 E-value=0.066 Score=39.00 Aligned_cols=62 Identities=16% Similarity=0.336 Sum_probs=42.8
Q ss_pred CeEEEEcc----cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCC
Q 024494 85 NDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~Ga----G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~ 153 (267)
++|.|+|+ +..|..+.+.|++. ||+|+.+..+.+.. .|..+...-.+....+|.++.+.++.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~--g~~V~pVnP~~~~i-----~G~~~y~sl~~lp~~~D~vvi~vp~~ 67 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSK--GFEVLPVNPNYDEI-----EGLKCYRSVRELPKDVDVIVFVVPPK 67 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEECBSSGGGSCTTCCEEEECSCHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHC--CCEEEEEccccccc-----cCccccccchhccccceEEEEEeCHH
Confidence 67999993 78999999999999 99999886543322 24333221112345789999887654
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.68 E-value=0.033 Score=42.06 Aligned_cols=33 Identities=18% Similarity=0.376 Sum_probs=30.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
-++|||+|.|.+|..-++.|++. |.+|++++..
T Consensus 13 gkrvLViGgG~va~~ka~~Ll~~--GA~VtVvap~ 45 (150)
T d1kyqa1 13 DKRILLIGGGEVGLTRLYKLMPT--GCKLTLVSPD 45 (150)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGG--TCEEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCC
Confidence 38999999999999999999999 9999999753
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=93.66 E-value=0.032 Score=47.28 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
-+|+|+|+|+-|..++.+|+++ |.+|+++.+.++
T Consensus 8 ~dV~IIGAG~sGl~~a~~L~~~--G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGAGFSGLYALYRLREL--GRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CCEEEECccHHHHHHHHHHHhC--CCCEEEEEcCCC
Confidence 4699999999999999999999 999999998654
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=93.65 E-value=0.032 Score=43.31 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=40.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEe-CCCCCc-----hhhh---ccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQT-MTADHH-----DELI---NMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~-R~~~~~-----~~l~---~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
+||.|.|+ |.+|+.+++.+.+. ++.++.+.. |..... .++. ..++............+|+||-...|
T Consensus 5 ikI~i~Ga~GrMG~~i~~~i~~~-~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~DViIDFs~p 81 (162)
T d1diha1 5 IRVAIAGAGGRMGRQLIQAALAL-EGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRP 81 (162)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHS-TTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhC-CCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccceEEEeccH
Confidence 78999997 99999999999886 377876554 432211 0110 11122211112356789999866443
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=93.42 E-value=0.036 Score=43.20 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=44.6
Q ss_pred CeEEEEcccHHhHHH--HHHHHhc--CCCCeEEEEeCCCCCchhhh--------ccCeeeec---CCc-cccCCCCEEEE
Q 024494 85 NDLLIVGPGVLGRLV--AEQWRQE--HPGCQIYGQTMTADHHDELI--------NMGITPSL---KWT-EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~GaG~IG~~L--a~~L~~~--~pG~~V~~l~R~~~~~~~l~--------~~~v~~d~---~d~-~~~~~~D~Vi~ 148 (267)
|||.|+|+|.+|..+ ...|+.. .++.|+..+|.++++.+... ..+....+ .|. +++.++|+|++
T Consensus 3 mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~Vv~ 82 (171)
T d1obba1 3 VKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVIN 82 (171)
T ss_dssp CEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEEEE
T ss_pred cEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeEee
Confidence 899999999998653 3334332 11359999999877653211 11112211 333 57899999999
Q ss_pred ccCCCC
Q 024494 149 CAPPSR 154 (267)
Q Consensus 149 ~a~~~~ 154 (267)
++....
T Consensus 83 ~~~~g~ 88 (171)
T d1obba1 83 TAMVGG 88 (171)
T ss_dssp CCCTTH
T ss_pred eccccc
Confidence 987653
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.24 E-value=0.043 Score=45.30 Aligned_cols=32 Identities=22% Similarity=0.374 Sum_probs=29.4
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.|+|+|+|.-|...|..|.++ |++|+++.++.
T Consensus 1 DViVIGaG~aGL~aA~~L~~~--G~~V~VlE~~~ 32 (383)
T d2v5za1 1 DVVVVGGGISGMAAAKLLHDS--GLNVVVLEARD 32 (383)
T ss_dssp SEEEECCBHHHHHHHHHHHHT--TCCEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHhC--CCCEEEEecCC
Confidence 389999999999999999999 99999998754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.12 E-value=0.11 Score=38.98 Aligned_cols=62 Identities=15% Similarity=0.201 Sum_probs=43.4
Q ss_pred CCeEEEEcc----cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCc-cccCCCCEEEEccCCC
Q 024494 84 ENDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWT-EATQKFPYVIFCAPPS 153 (267)
Q Consensus 84 m~~ILV~Ga----G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~-~~~~~~D~Vi~~a~~~ 153 (267)
.++|.|+|+ +..|..+.+.|++. ||+|+.+..+.... .|..+ ..+. +....+|.|+.+.++.
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~--g~~v~pVnP~~~~i-----~G~~~-~~sl~dlp~~iD~v~i~vp~~ 85 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEH--GYDVYPVNPKYEEV-----LGRKC-YPSVLDIPDKIEVVDLFVKPK 85 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHT--TCEEEEECTTCSEE-----TTEEC-BSSGGGCSSCCSEEEECSCHH
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHC--CCEEEEECCccccc-----CCCcc-cccccccCccceEEEEEeCHH
Confidence 378999994 68999999999999 99998886543222 23333 2222 2345799999987654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.10 E-value=0.1 Score=38.59 Aligned_cols=84 Identities=13% Similarity=0.229 Sum_probs=53.9
Q ss_pred CCCeEEEEcc----cHHhHHHHHHHHhcCCC-CeEEEEeCCCCCchhhhccCeee--ecCCccccCCCCEEEEccCCCCC
Q 024494 83 GENDLLIVGP----GVLGRLVAEQWRQEHPG-CQIYGQTMTADHHDELINMGITP--SLKWTEATQKFPYVIFCAPPSRS 155 (267)
Q Consensus 83 ~m~~ILV~Ga----G~IG~~La~~L~~~~pG-~~V~~l~R~~~~~~~l~~~~v~~--d~~d~~~~~~~D~Vi~~a~~~~~ 155 (267)
..++|.|+|+ |..|..+.+.|++. | ++|+.+..+.+.. .|..+ ++.| ....+|.++.+.++...
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~--~~g~v~pVnP~~~~i-----~G~~~y~sl~d--lp~~vDlvvi~vp~~~~ 77 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEY--KKGKVYPVNIKEEEV-----QGVKAYKSVKD--IPDEIDLAIIVVPKRFV 77 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTC--CSSEEEEECSSCSEE-----TTEECBSSTTS--CSSCCSEEEECSCHHHH
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHc--CCCcEEEeccCcccc-----CCeEeecchhh--cCCCCceEEEecChHHh
Confidence 3478999994 78999999999876 5 7999886654332 23333 2333 34579999998865321
Q ss_pred CChHHHHHHHHHHhCCCCcEEEEcC
Q 024494 156 LDYPGDVRLAALSWNGEGSFLFTSS 180 (267)
Q Consensus 156 ~~~~~~~~~l~~~~~~v~r~V~~SS 180 (267)
.+.++.+ ...+++.++.+|+
T Consensus 78 ---~~~~~~~--~~~g~~~~vi~s~ 97 (129)
T d2csua1 78 ---KDTLIQC--GEKGVKGVVIITA 97 (129)
T ss_dssp ---HHHHHHH--HHHTCCEEEECCC
T ss_pred ---HHHHHHH--HHcCCCEEEEecc
Confidence 1122222 2347888888775
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.08 E-value=0.062 Score=40.47 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=30.3
Q ss_pred CeEEEE--cccHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 85 NDLLIV--GPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 85 ~~ILV~--GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
+.++|+ |.||+|..+++.|.+. |++|+.+.+.+.-
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~--G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATA--GHEVTIVSGVHLA 76 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHT--TCEEEEEESSCTT
T ss_pred CceEEEecCCChHHHHHHHHHHHc--CCeEEEEecCCcc
Confidence 566666 7899999999999999 9999999997643
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=92.81 E-value=0.061 Score=43.07 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=31.1
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
-.|+|+|+|..|...+..|.++ |++|.++.+++.
T Consensus 3 yDViIIGaG~aGl~aA~~la~~--G~~V~liEk~~~ 36 (251)
T d2i0za1 3 YDVIVIGGGPSGLMAAIGAAEE--GANVLLLDKGNK 36 (251)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence 4699999999999999999999 999999998754
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=92.72 E-value=0.064 Score=41.65 Aligned_cols=69 Identities=20% Similarity=0.164 Sum_probs=41.9
Q ss_pred CeEEEEcccHHhHH-HHHHHHhcCCCCeEEEE-eCCCCCchhhhc-cCeeeecCCc-c--ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGRL-VAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITPSLKWT-E--ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~~-La~~L~~~~pG~~V~~l-~R~~~~~~~l~~-~~v~~d~~d~-~--~~~~~D~Vi~~a~~~ 153 (267)
.||.|+|+|.+|+. ..+.+.+.....+|+++ ++++++...+.+ .+......+. + .-.++|+|+.+.++.
T Consensus 4 irigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~~~~ell~~~~id~v~I~tp~~ 78 (181)
T d1zh8a1 4 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFDSYEELLESGLVDAVDLTLPVE 78 (181)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEESCHHHHHHSSCCSEEEECCCGG
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceeeeeeccccccccceeecccccc
Confidence 47899999999986 46777664113577755 566655544322 2332222332 2 235799999887654
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.68 E-value=0.07 Score=38.50 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=28.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcC-CCCeEEEEeCCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEH-PGCQIYGQTMTADH 121 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~-pG~~V~~l~R~~~~ 121 (267)
++++|+|+|++|-.++..|.+-. .|.+|+.+.|.+.-
T Consensus 21 ~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i 58 (117)
T d1aoga2 21 RRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMI 58 (117)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence 78999999999999997665430 05689999987543
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.67 E-value=0.084 Score=45.14 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=50.5
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----ccCeeeecCCccccCCCCEEEEccCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----NMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
.++.|+|+|..++.-++.|....|=-+|.+.+|++++...+. ..++.......++..++|+|+-|.+.
T Consensus 126 ~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~~~a~~~aDiV~taT~s 197 (320)
T d1omoa_ 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQPAEEASRCDVLVTTTPS 197 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECCHHHHTSSSEEEECCCC
T ss_pred cEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccchhhhhccccEEEEeccC
Confidence 679999999999999999988765568999999987765443 23344333444567899999877653
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=92.67 E-value=0.091 Score=42.30 Aligned_cols=68 Identities=18% Similarity=0.172 Sum_probs=42.8
Q ss_pred CeEEEEcccHHhH-HHHHHHHhcCCCCeEEEE-eCCCCCchhhhc-cCeee----ecCCc-c--ccCCCCEEEEccCCC
Q 024494 85 NDLLIVGPGVLGR-LVAEQWRQEHPGCQIYGQ-TMTADHHDELIN-MGITP----SLKWT-E--ATQKFPYVIFCAPPS 153 (267)
Q Consensus 85 ~~ILV~GaG~IG~-~La~~L~~~~pG~~V~~l-~R~~~~~~~l~~-~~v~~----d~~d~-~--~~~~~D~Vi~~a~~~ 153 (267)
-+|.|+|+|.+|+ ++.+.+... ++.+|+++ +|++++.....+ .++.. ...|. + .-.++|+|+.+.++.
T Consensus 34 iriaiIG~G~~~~~~~~~~~~~~-~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~~~~iD~V~I~tp~~ 111 (221)
T d1h6da1 34 FGYAIVGLGKYALNQILPGFAGC-QHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAKDPKIDAVYIILPNS 111 (221)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTC-SSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGGCTTCCEEEECSCGG
T ss_pred EEEEEEcCcHHHHHHHHHHHHhC-CCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcccccceeeeeccchh
Confidence 3799999999997 566666554 57888855 666666544322 33321 11222 2 235789999887764
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.59 E-value=0.075 Score=39.44 Aligned_cols=34 Identities=21% Similarity=0.277 Sum_probs=29.1
Q ss_pred CeEEEEcccHHhHHHHHHHH----hcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWR----QEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~----~~~pG~~V~~l~R~~~ 120 (267)
++|+|+|.|++|-.++..|. +. |.+|+.+.+.+.
T Consensus 38 k~i~IvGgG~~G~E~A~~l~~~~~~~--g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 38 KSITIIGGGFLGSELACALGRKARAL--GTEVIQLFPEKG 75 (137)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHH--TCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHhc--CCEEEEeccccc
Confidence 68999999999999998884 45 899999988654
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=92.56 E-value=0.074 Score=39.18 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=51.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC-CCCCchhhhccCeeee-cCCcc--ccCCCCEEEEccCCCCCCChHH
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM-TADHHDELINMGITPS-LKWTE--ATQKFPYVIFCAPPSRSLDYPG 160 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R-~~~~~~~l~~~~v~~d-~~d~~--~~~~~D~Vi~~a~~~~~~~~~~ 160 (267)
-+|+|.|||.+|+.|++.+..+ ++++++++.- ++.+..... .|+... ..+.+ .....+.++.+++.. ...
T Consensus 4 ~~v~I~GaG~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~G~~I-~Gi~V~~~~~l~~~~~~~i~iai~~i~~~----~~~ 77 (126)
T d2dt5a2 4 WGLCIVGMGRLGSALADYPGFG-ESFELRGFFDVDPEKVGRPV-RGGVIEHVDLLPQRVPGRIEIALLTVPRE----AAQ 77 (126)
T ss_dssp EEEEEECCSHHHHHHHHCSCCC-SSEEEEEEEESCTTTTTCEE-TTEEEEEGGGHHHHSTTTCCEEEECSCHH----HHH
T ss_pred ceEEEEcCCHHHHHHHHhHhhc-CCcEEEEEEeCchHhcCCEE-CCEEEecHHHHHHHHhhcccEEEEeCCHH----HHH
Confidence 3799999999999999988654 3889887754 454432211 344432 12211 224566666665432 122
Q ss_pred HHHHHHHHhCCCCcEEEEcCCcc
Q 024494 161 DVRLAALSWNGEGSFLFTSSSAI 183 (267)
Q Consensus 161 ~~~~l~~~~~~v~r~V~~SS~~V 183 (267)
.+... +...+++.+.-++....
T Consensus 78 ~I~d~-l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 78 KAADL-LVAAGIKGILNFAPVVL 99 (126)
T ss_dssp HHHHH-HHHHTCCEEEECSSSCC
T ss_pred HHHHH-HHHcCCCEEeecCceee
Confidence 22222 23347887776655443
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=92.39 E-value=0.057 Score=45.11 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=29.1
Q ss_pred eEEEEcccHHhHHHHHHHH-----hcCCCCeEEEEeCCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWR-----QEHPGCQIYGQTMTAD 120 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~-----~~~pG~~V~~l~R~~~ 120 (267)
.|+|+|+|..|..+|..|. ++ |++|+++.|.+.
T Consensus 9 DV~IvGaG~aGl~lA~~La~~~~~~~--G~~v~vlEr~~~ 46 (360)
T d1pn0a1 9 DVLIVGAGPAGLMAARVLSEYVRQKP--DLKVRIIDKRST 46 (360)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHST--TCCEEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHhcccccC--CCcEEEEcCCCC
Confidence 5999999999999999996 45 999999998754
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=92.23 E-value=0.092 Score=37.67 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=29.1
Q ss_pred CCeEEEEcccHHhHHHHHHHH---hcCCCCeEEEEeCCCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWR---QEHPGCQIYGQTMTAD 120 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~---~~~pG~~V~~l~R~~~ 120 (267)
.++++|+|.|++|-.++..|. +. |.+|+.+.|.+.
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~--g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKAR--GGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCT--TCEEEEEESSSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhccc--ccccceeccccc
Confidence 378999999999999997654 44 789999998754
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=91.87 E-value=0.13 Score=40.03 Aligned_cols=53 Identities=11% Similarity=0.228 Sum_probs=39.4
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPP 152 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~ 152 (267)
-++|+|+|- ..+|+.|+..|.++ |..|+........... ...++|+||.++|-
T Consensus 37 GK~v~VIGrS~~VG~Pla~lL~~~--gatVt~~h~~t~~l~~--------------~~~~ADivI~a~G~ 90 (166)
T d1b0aa1 37 GLNAVVIGASNIVGRPMSMELLLA--GCTTTVTHRFTKNLRH--------------HVENADLLIVAVGK 90 (166)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTT--TCEEEEECSSCSCHHH--------------HHHHCSEEEECSCC
T ss_pred cceEEEEeccccccHHHHHHHHHh--hccccccccccchhHH--------------HHhhhhHhhhhccC
Confidence 389999995 78999999999999 9999988765543322 23456666666663
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=91.77 E-value=0.065 Score=41.66 Aligned_cols=70 Identities=11% Similarity=0.051 Sum_probs=44.1
Q ss_pred CeEEEEcccHHhHH-HHHHHHhcCCC---CeEEEEeCCCCCchhhhc--------cC--eeee-cCCc-cccCCCCEEEE
Q 024494 85 NDLLIVGPGVLGRL-VAEQWRQEHPG---CQIYGQTMTADHHDELIN--------MG--ITPS-LKWT-EATQKFPYVIF 148 (267)
Q Consensus 85 ~~ILV~GaG~IG~~-La~~L~~~~pG---~~V~~l~R~~~~~~~l~~--------~~--v~~d-~~d~-~~~~~~D~Vi~ 148 (267)
.||.|+|+|.+|.. ++..|+...+. -+|+.+|.++++.+.... .+ .... ..|. ++++++|+||.
T Consensus 4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vvi 83 (167)
T d1u8xx1 4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVMA 83 (167)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEEE
T ss_pred ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEEE
Confidence 58999999877765 33444443223 389999998776532110 11 1111 2343 67899999999
Q ss_pred ccCCCC
Q 024494 149 CAPPSR 154 (267)
Q Consensus 149 ~a~~~~ 154 (267)
+++..+
T Consensus 84 tag~~~ 89 (167)
T d1u8xx1 84 HIRVGK 89 (167)
T ss_dssp CCCTTH
T ss_pred CCCcCC
Confidence 998764
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.29 E-value=0.16 Score=37.25 Aligned_cols=37 Identities=11% Similarity=0.222 Sum_probs=32.1
Q ss_pred CeEEEEccc-----------HHhHHHHHHHHhcCCCCeEEEEeCCCCCch
Q 024494 85 NDLLIVGPG-----------VLGRLVAEQWRQEHPGCQIYGQTMTADHHD 123 (267)
Q Consensus 85 ~~ILV~GaG-----------~IG~~La~~L~~~~pG~~V~~l~R~~~~~~ 123 (267)
+||||+|+| |-+.+.++.|++. |++++.+.-+|+...
T Consensus 5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~--g~~~IliN~NPeTVs 52 (121)
T d1a9xa4 5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALRED--GYETIMVNCNPETVS 52 (121)
T ss_dssp CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHT--TCEEEEECCCTTSST
T ss_pred CEEEEECCCcCcccccchhhHHHHHHHHHHHhc--CCeEEEEecChhhhh
Confidence 789999986 5677899999999 999999999987653
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.15 E-value=0.3 Score=37.89 Aligned_cols=37 Identities=11% Similarity=0.171 Sum_probs=32.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
-++|+|+|. ..+|+.|+..|.++ |..|+.........
T Consensus 39 Gk~vvVIGrS~iVGrPLa~lL~~~--gatVt~~~~~t~~l 76 (170)
T d1a4ia1 39 GRHAVVVGRSKIVGAPMHDLLLWN--NATVTTCHSKTAHL 76 (170)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHT--TCEEEEECTTCSSH
T ss_pred cceEEEEecCCccchHHHHHHHhc--cCceEEEecccccH
Confidence 389999996 78999999999999 99999998766544
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=90.86 E-value=0.21 Score=40.97 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=29.9
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
-++|+|=|.|.+|+++++.|.+. |.+|++++-.
T Consensus 31 g~~v~IqGfGnVG~~~a~~L~~~--Gakvv~vsD~ 63 (242)
T d1v9la1 31 GKTVAIQGMGNVGRWTAYWLEKM--GAKVIAVSDI 63 (242)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTT--TCEEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCeEEEeecc
Confidence 37899999999999999999999 9999988753
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=90.29 E-value=0.14 Score=41.39 Aligned_cols=35 Identities=20% Similarity=0.247 Sum_probs=31.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH 121 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~ 121 (267)
..|+|+|+|.-|...|-.|.++ |++|.++.+++.-
T Consensus 5 ~DViIIGaG~aGl~aA~~la~~--G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 5 SENIIIGAGAAGLFCAAQLAKL--GKSVTVFDNGKKI 39 (253)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEECSSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHC--CCcEEEEecCCCC
Confidence 4699999999999999999999 9999999997654
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=90.14 E-value=0.11 Score=40.96 Aligned_cols=34 Identities=18% Similarity=0.129 Sum_probs=30.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCC-------CeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPG-------CQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG-------~~V~~l~R~~~ 120 (267)
.||+|+|+|.-|...|.+|.++ | ++|+++.+.+.
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~--G~~~~~~~~~V~v~E~~~~ 43 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKA--ADTTEDLDMAVDMLEMLPT 43 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--HHHSTTCCEEEEEEESSSS
T ss_pred cEEEEECcCHHHHHHHHHHHHc--CCccccCCCceEEEecCCC
Confidence 5899999999999999999998 7 57999998754
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=89.72 E-value=0.24 Score=40.03 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=28.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~ 118 (267)
.+|+|+|+|-+|++++..|... |. +++.+|.+
T Consensus 31 ~~VliiG~GglGs~va~~La~~--Gvg~i~lvD~D 63 (247)
T d1jw9b_ 31 SRVLIVGLGGLGCAASQYLASA--GVGNLTLLDFD 63 (247)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCSEEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHHc--CCCeEEEECCc
Confidence 7899999999999999999999 97 77887764
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=89.70 E-value=0.17 Score=39.04 Aligned_cols=69 Identities=10% Similarity=0.030 Sum_probs=41.5
Q ss_pred CeEEEEcccHHh--HHHHHHHHhcCCC---CeEEEEeCCCCCc--hhhh--------ccCeeee---cCCc-cccCCCCE
Q 024494 85 NDLLIVGPGVLG--RLVAEQWRQEHPG---CQIYGQTMTADHH--DELI--------NMGITPS---LKWT-EATQKFPY 145 (267)
Q Consensus 85 ~~ILV~GaG~IG--~~La~~L~~~~pG---~~V~~l~R~~~~~--~~l~--------~~~v~~d---~~d~-~~~~~~D~ 145 (267)
|||.|+|+|-+| ..++..+... +. -++..++.+++.. +.+. ..+.... ..|. ++++++|+
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~-~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDv 80 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRY-HELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 80 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTT-TTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred cEEEEECCChhhHHHHHHHHHHhc-cccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCE
Confidence 789999998555 4444444433 12 3888888876542 2111 1122222 1332 56899999
Q ss_pred EEEccCCCC
Q 024494 146 VIFCAPPSR 154 (267)
Q Consensus 146 Vi~~a~~~~ 154 (267)
||.+++..+
T Consensus 81 Vv~ta~~~~ 89 (169)
T d1s6ya1 81 VTTQFRVGG 89 (169)
T ss_dssp EEECCCTTH
T ss_pred EEEccccCC
Confidence 999998764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=89.57 E-value=0.16 Score=38.68 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=29.5
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|++|.|+|+ |-||....+-+.+....++|.+++-+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 688999996 999999999887763357999998643
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=89.32 E-value=0.15 Score=39.61 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=52.4
Q ss_pred CeEEEEcc-cHHhHHHHHHHHhcCCCCe-EEEEeCCCCCchhhh-ccCeee--ecCCc--------cccCCCCEEEEccC
Q 024494 85 NDLLIVGP-GVLGRLVAEQWRQEHPGCQ-IYGQTMTADHHDELI-NMGITP--SLKWT--------EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~Ga-G~IG~~La~~L~~~~pG~~-V~~l~R~~~~~~~l~-~~~v~~--d~~d~--------~~~~~~D~Vi~~a~ 151 (267)
..|||.|+ |-+|+..++..+.. |.+ |++.++++++...+. ..+.+. +..+. ....++|+||.+.+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~--Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG 109 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLL--GCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVG 109 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHT--TCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CEEEEECCCchhhHHHHHHHHHc--CCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCC
Confidence 56999995 99999999998888 875 555566655544343 234332 33222 12357999999986
Q ss_pred CCCCCChHHHHHHHHHHhCCCCcEEEEcCCcccc
Q 024494 152 PSRSLDYPGDVRLAALSWNGEGSFLFTSSSAIYD 185 (267)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~~~v~r~V~~SS~~VYg 185 (267)
.. .....+.......+++.++..+-|.
T Consensus 110 g~-------~~~~~~~~l~~~G~iv~~G~~s~~~ 136 (187)
T d1vj1a2 110 GD-------ISNTVISQMNENSHIILCGQISQYN 136 (187)
T ss_dssp HH-------HHHHHHTTEEEEEEEEEC-------
T ss_pred ch-------hHHHHhhhccccccEEEeccccccc
Confidence 31 1222222223456888877666553
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=89.31 E-value=0.16 Score=42.98 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=29.1
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.|+|+|+|+-|..+|.+|.+. |++|.++-+.
T Consensus 4 ~VIVVGsG~aG~v~A~rLaea--G~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIGTGYGAAVSALRLGEA--GVQTLMLEMG 34 (367)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESS
T ss_pred eEEEeCcCHHHHHHHHHHHHC--cCeEEEEecC
Confidence 489999999999999999998 9999999985
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=89.29 E-value=0.22 Score=42.04 Aligned_cols=32 Identities=13% Similarity=0.150 Sum_probs=29.4
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R 117 (267)
-++|+|-|.|.+|+++++.|.+. |.+|++++-
T Consensus 36 gktvaIqGfGnVG~~~A~~L~e~--Gakvv~vsD 67 (293)
T d1hwxa1 36 DKTFAVQGFGNVGLHSMRYLHRF--GAKCVAVGE 67 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHC--CCEEEEEEc
Confidence 37899999999999999999999 999998874
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=89.19 E-value=0.045 Score=42.19 Aligned_cols=22 Identities=18% Similarity=0.365 Sum_probs=19.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhc
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQE 106 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~ 106 (267)
++|+|+|+|.+|+..++.|.+.
T Consensus 8 ~kv~iIG~G~~g~~h~~~l~~~ 29 (172)
T d1lc0a1 8 FGVVVVGVGRAGSVRLRDLKDP 29 (172)
T ss_dssp EEEEEECCSHHHHHHHHHHTSH
T ss_pred cEEEEEcCCHHHHHHHHHHHhC
Confidence 6899999999999988888754
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=89.16 E-value=0.42 Score=39.42 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=29.2
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R 117 (267)
-++|+|-|.|.+|+++++.|.+. |.+|++++-
T Consensus 36 g~~v~IQGfGnVG~~~a~~L~e~--GakvvavsD 67 (255)
T d1bgva1 36 GKTVALAGFGNVAWGAAKKLAEL--GAKAVTLSG 67 (255)
T ss_dssp TCEEEECCSSHHHHHHHHHHHHH--TCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHc--CCeEEEEec
Confidence 37899999999999999999999 999998764
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=89.02 E-value=0.18 Score=41.57 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=30.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.|+|+|+|..|...+.+|.++ |.+|+++.+.+
T Consensus 18 DVlVIG~G~aGl~aA~~la~~--G~~V~lvEK~~ 49 (308)
T d1y0pa2 18 DVVVVGSGGAGFSAAISATDS--GAKVILIEKEP 49 (308)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCcEEEEecCC
Confidence 699999999999999999999 99999998864
|
| >d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.82 E-value=0.27 Score=38.83 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=28.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.+++|+|+|++|-.++..|++..+..+|+.+++.
T Consensus 5 ~~~vIvG~G~aG~~~A~~Lr~~~~~~~I~li~~e 38 (213)
T d1m6ia1 5 VPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 38 (213)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence 4689999999999999999998334579888864
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=88.81 E-value=0.4 Score=38.58 Aligned_cols=58 Identities=14% Similarity=0.080 Sum_probs=40.0
Q ss_pred ccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeee-cC---Cc-----cccCCCCEEEEccCCCC
Q 024494 92 PGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPS-LK---WT-----EATQKFPYVIFCAPPSR 154 (267)
Q Consensus 92 aG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d-~~---d~-----~~~~~~D~Vi~~a~~~~ 154 (267)
+|.+|.+|++++..+ |++|+.++-...... ..++... .. +. +.+.++|++|++|+..+
T Consensus 31 SGk~G~aiA~~~~~~--Ga~V~li~g~~~~~~---p~~~~~~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 31 SGKMGFAIAAAAARR--GANVTLVSGPVSLPT---PPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp CSHHHHHHHHHHHHT--TCEEEEEECSCCCCC---CTTEEEEECCSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred cHHHHHHHHHHHHHc--CCchhhhhcccccCc---ccccccceehhhHHHHHHHHhhhccceeEeeeechhh
Confidence 499999999999999 999999986543211 1233322 11 11 34578999999998764
|
| >d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=88.76 E-value=0.36 Score=35.99 Aligned_cols=25 Identities=32% Similarity=0.332 Sum_probs=22.8
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCe
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQ 111 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~ 111 (267)
++|+|+|.|++|.-++..+.+. |.+
T Consensus 30 krVvVIGgG~~g~d~a~~~~r~--G~~ 54 (162)
T d1ps9a2 30 NKVAIIGCGGIGFDTAMYLSQP--GES 54 (162)
T ss_dssp SEEEEECCHHHHHHHHHHHTCC--SSC
T ss_pred CceEEEcCchhHHHHHHHHHHc--CCc
Confidence 7999999999999999999988 753
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=88.67 E-value=0.22 Score=40.75 Aligned_cols=34 Identities=21% Similarity=0.276 Sum_probs=29.9
Q ss_pred CeEEEEcccHHhHHHHHHHHh-cCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQ-EHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~-~~pG~~V~~l~R~~~ 120 (267)
..|+|+|+|.-|...+.+|.+ . |++|+++.+.+.
T Consensus 34 ~DViVIGaGpaGL~aA~~LA~~~--G~~V~vlE~~~~ 68 (278)
T d1rp0a1 34 TDVVVVGAGSAGLSAAYEISKNP--NVQVAIIEQSVS 68 (278)
T ss_dssp EEEEEECCSHHHHHHHHHHHTST--TSCEEEEESSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHcc--CCeEEEEecCCC
Confidence 359999999999999999976 5 999999998753
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.64 E-value=0.48 Score=34.90 Aligned_cols=36 Identities=22% Similarity=0.422 Sum_probs=31.6
Q ss_pred CeEEEEccc-----------HHhHHHHHHHHhcCCCCeEEEEeCCCCCc
Q 024494 85 NDLLIVGPG-----------VLGRLVAEQWRQEHPGCQIYGQTMTADHH 122 (267)
Q Consensus 85 ~~ILV~GaG-----------~IG~~La~~L~~~~pG~~V~~l~R~~~~~ 122 (267)
+||||+|+| |-+.+.+++|++. |++++.+.-+|+..
T Consensus 8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~NP~TV 54 (127)
T d1a9xa3 8 KSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNSNPATI 54 (127)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECSCTTCG
T ss_pred CEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecCchHhh
Confidence 899999985 4567889999999 99999999998875
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=88.40 E-value=0.26 Score=38.55 Aligned_cols=65 Identities=15% Similarity=0.194 Sum_probs=48.5
Q ss_pred CCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCC-chhhhccCeeeecCCccccCCCCEEEEccC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADH-HDELINMGITPSLKWTEATQKFPYVIFCAP 151 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~-~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~ 151 (267)
.++|.|+|.|--|.+=+..|++. |.+|++--|...+ ...-...|++.. .-.++.+.+|+|..+.+
T Consensus 16 ~k~IaViGYGsQG~AhAlNLrDS--G~~V~VGLr~gs~s~~~A~~~Gf~v~-~~~eA~~~aDiim~L~P 81 (182)
T d1np3a2 16 GKKVAIIGYGSQGHAHACNLKDS--GVDVTVGLRSGSATVAKAEAHGLKVA-DVKTAVAAADVVMILTP 81 (182)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHTTCEEE-CHHHHHHTCSEEEECSC
T ss_pred CCEEEEEeeCcHhHHHHhhhhhc--CCCEEEEcCCCCccHHHHhhhccccc-cHHHHhhhcCeeeeecc
Confidence 48899999999999999999999 9999888776543 222233455442 11246789999999886
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=88.32 E-value=0.25 Score=38.47 Aligned_cols=31 Identities=16% Similarity=0.079 Sum_probs=28.8
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.|+|+|+|+.|...+..+.+. |.+|..+.+.
T Consensus 4 DvvVIG~G~aG~~aA~~a~~~--G~kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGGGSGGIASINRAAMY--GQKCALIEAK 34 (217)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--TCCEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCEEEEEecc
Confidence 489999999999999999999 9999999875
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=88.01 E-value=0.8 Score=33.72 Aligned_cols=83 Identities=16% Similarity=0.210 Sum_probs=51.4
Q ss_pred CeEEEEcc----cHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhhccCeeeecCCccccCCCCEEEEccCCCCCCChHH
Q 024494 85 NDLLIVGP----GVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELINMGITPSLKWTEATQKFPYVIFCAPPSRSLDYPG 160 (267)
Q Consensus 85 ~~ILV~Ga----G~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~~~~v~~d~~d~~~~~~~D~Vi~~a~~~~~~~~~~ 160 (267)
+.|.|+|+ +..|..+.+.|++. |++++.+.-++... ++ .|..+...-.+....+|.|+.+.++....+.++
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~--g~~~~~v~~~~~~~-~i--~g~~~~~~l~~i~~~iD~v~v~~p~~~v~~~v~ 88 (136)
T d1iuka_ 14 KTIAVLGAHKDPSRPAHYVPRYLREQ--GYRVLPVNPRFQGE-EL--FGEEAVASLLDLKEPVDILDVFRPPSALMDHLP 88 (136)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHT--TCEEEEECGGGTTS-EE--TTEECBSSGGGCCSCCSEEEECSCHHHHTTTHH
T ss_pred CeEEEEeecCCCCCchHHHHHHHhcC--CCCceEEEeccccc-ee--eceecccchhhccCCCceEEEeccHHHHHHHHH
Confidence 67999994 68999999999999 99998775543221 11 233322211223457899999987654333333
Q ss_pred HHHHHHHHhCCCCcEEE
Q 024494 161 DVRLAALSWNGEGSFLF 177 (267)
Q Consensus 161 ~~~~l~~~~~~v~r~V~ 177 (267)
.... .+++.+++
T Consensus 89 ~~~~-----~g~k~i~~ 100 (136)
T d1iuka_ 89 EVLA-----LRPGLVWL 100 (136)
T ss_dssp HHHH-----HCCSCEEE
T ss_pred HHHh-----hCCCeEEE
Confidence 2222 26666554
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.38 E-value=0.34 Score=38.38 Aligned_cols=31 Identities=23% Similarity=0.451 Sum_probs=28.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R 117 (267)
|||+++|++..|..+.+.|.++ ||+|.++..
T Consensus 1 MkI~~~G~~~~~~~~l~~L~~~--~~~i~~V~t 31 (203)
T d2bw0a2 1 MKIAVIGQSLFGQEVYCHLRKE--GHEVVGVFT 31 (203)
T ss_dssp CEEEEECCHHHHHHHHHHHHHT--TCEEEEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHC--CCcEEEEEc
Confidence 7899999999999999999999 999987654
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=87.02 E-value=0.34 Score=40.42 Aligned_cols=31 Identities=26% Similarity=0.398 Sum_probs=29.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.++|+|+|.-|..+|.+|.+. |++|.++-+.
T Consensus 6 DviIVGsG~aG~v~A~~La~~--G~kVlvLEaG 36 (379)
T d2f5va1 6 DVVIVGSGPIGCTYARELVGA--GYKVAMFDIG 36 (379)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHhhC--CCeEEEEecC
Confidence 589999999999999999998 9999999875
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=87.00 E-value=0.4 Score=41.23 Aligned_cols=67 Identities=15% Similarity=0.155 Sum_probs=49.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCCCchhhh----c-cCeeeecC-Cc-cccCCCCEEEEccC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTADHHDELI----N-MGITPSLK-WT-EATQKFPYVIFCAP 151 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~~~~~l~----~-~~v~~d~~-d~-~~~~~~D~Vi~~a~ 151 (267)
+++.|+|+|..+..-++.+.+..|=-+|.+.+|++++...+. . .+++.... +. +++.++|+|+-|.+
T Consensus 129 ~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 129 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTA 202 (340)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSSHHHHHTTCSEEEECCC
T ss_pred ceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCCHHHHHhcCCceeeccc
Confidence 679999999999999998877654458999999987655442 1 35555443 33 57889999987664
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=86.87 E-value=0.34 Score=37.61 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=30.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.|+|+|+|..|...+..+.+. |.+|.++.+.+.
T Consensus 5 DvvVIGgGpaGl~aA~~aa~~--G~kV~vie~~~~ 37 (221)
T d1dxla1 5 DVVIIGGGPGGYVAAIKAAQL--GFKTTCIEKRGA 37 (221)
T ss_dssp CEEEECCSHHHHHHHHHHHHH--TCCEEEEECSSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCC
Confidence 589999999999999999999 999999987643
|
| >d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=86.50 E-value=0.34 Score=40.29 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=31.4
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.+|+|+|+|.-|...+..|.++.+|++|+.+.+++.
T Consensus 51 ~~~~~~g~g~~g~~~a~~~~~~~~~~~~~~~~~~~~ 86 (311)
T d2gjca1 51 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 86 (311)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHhCCCCeEEEEEcCCC
Confidence 569999999999999999987545999999998654
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=86.18 E-value=0.35 Score=40.87 Aligned_cols=31 Identities=26% Similarity=0.295 Sum_probs=29.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.++|+|+|+-|..+|.+|.+. |++|.++-+.
T Consensus 9 dvIVVGsG~aG~v~A~rLaea--G~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIGSGYGGAVAALRLTQA--GIPTQIVEMG 39 (370)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHC--CCeEEEEeCC
Confidence 589999999999999999998 9999999875
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=85.88 E-value=0.34 Score=40.29 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=30.9
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
..|+|+|+|..|...+..|.++ |.+|+++.+.+.
T Consensus 24 ~DVvVIG~G~aGl~aA~~la~~--G~~V~llEk~~~ 57 (322)
T d1d4ca2 24 TDVVIIGSGGAGLAAAVSARDA--GAKVILLEKEPI 57 (322)
T ss_dssp CSEEEECSSHHHHHHHHHHHTT--TCCEEEECSSSS
T ss_pred ceEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCCC
Confidence 4699999999999999999999 999999998643
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=85.51 E-value=0.47 Score=38.92 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=25.0
Q ss_pred CeEEEEcc---cHH--hHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGP---GVL--GRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~Ga---G~I--G~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
+||||+++ |.+ ...|+++|.++ ||+|..++...
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~--G~eV~~i~~~~ 38 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTAD 38 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhC--CCEEEEEEeCC
Confidence 58888853 555 55689999999 99998877543
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=85.39 E-value=0.4 Score=37.42 Aligned_cols=32 Identities=28% Similarity=0.193 Sum_probs=29.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
-.|+|+|+|..|...+..+.+. |.+|..+.+.
T Consensus 6 ~DlvVIG~GpaGl~aA~~aa~~--G~~V~liE~~ 37 (220)
T d1lvla1 6 TTLLIIGGGPGGYVAAIRAGQL--GIPTVLVEGQ 37 (220)
T ss_dssp CSEEEECCSHHHHHHHHHHHHH--TCCEEEECSS
T ss_pred cCEEEECCCHHHHHHHHHHHHC--CCcEEEEecC
Confidence 4699999999999999999999 9999999875
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.10 E-value=0.54 Score=37.05 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=28.0
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
|||+|.|.+-.|..+.+.|.+. |++|.++...
T Consensus 1 Mkiv~~~~~~~g~~~l~~L~~~--g~~I~~Vvt~ 32 (203)
T d2blna2 1 MKTVVFAYHDMGCLGIEALLAA--GYEISAIFTH 32 (203)
T ss_dssp CEEEEEECHHHHHHHHHHHHHT--TCEEEEEECC
T ss_pred CeEEEEecCHHHHHHHHHHHHC--CCCEEEEEcC
Confidence 7899999988999999999999 9999876543
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.95 E-value=0.45 Score=42.06 Aligned_cols=33 Identities=27% Similarity=0.368 Sum_probs=29.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCC-eEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGC-QIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~-~V~~l~R~~ 119 (267)
.||||+|+|-+|..+++.|... |. +++.+|.+.
T Consensus 38 ~kVlvvG~GglG~ei~k~L~~~--Gvg~i~lvD~D~ 71 (426)
T d1yovb1 38 CKVLVIGAGGLGCELLKNLALS--GFRQIHVIDMDT 71 (426)
T ss_dssp CCEEEECSSTTHHHHHHHHHTT--TCCCEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHc--CCCeEEEEECCC
Confidence 6899999999999999999999 87 788888753
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=84.81 E-value=0.46 Score=36.62 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=28.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTM 117 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R 117 (267)
|||.|=|.|-||+.+.+.|.++ +.+|.++.-
T Consensus 1 ikigINGfGRIGR~~~R~l~~~--~i~iv~INd 31 (168)
T d2g82a1 1 MKVGINGFGRIGRQVFRILHSR--GVEVALIND 31 (168)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH--TCCEEEEEC
T ss_pred CEEEEECCcHHHHHHHHHHhcC--CCEEEEECC
Confidence 6899999999999999999998 999988864
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=84.70 E-value=0.34 Score=36.75 Aligned_cols=36 Identities=14% Similarity=0.262 Sum_probs=29.1
Q ss_pred CCeEEEEcc-cHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 84 ENDLLIVGP-GVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 84 m~~ILV~Ga-G~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|++|.|+|+ |-||....+-+.+....++|.+++-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 588999996 999999988887652258999998643
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.64 E-value=0.56 Score=36.41 Aligned_cols=33 Identities=24% Similarity=0.275 Sum_probs=30.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTAD 120 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~~ 120 (267)
.|+|+|+|..|...+..+.+. |.+|..+.+.+.
T Consensus 7 DviVIG~GpAGl~aA~~aa~~--G~kV~lie~~~~ 39 (233)
T d1v59a1 7 DVVIIGGGPAGYVAAIKAAQL--GFNTACVEKRGK 39 (233)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCCEEEEESSSS
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCcEEEEEecCC
Confidence 489999999999999999999 999999987644
|
| >d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class II ketol-acid reductoisomerase (KARI) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=84.53 E-value=0.48 Score=38.25 Aligned_cols=68 Identities=13% Similarity=0.082 Sum_probs=46.6
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCC------CeEEEEeCCC-CCchhhhccCeeee---cCC-ccccCCCCEEEEccC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPG------CQIYGQTMTA-DHHDELINMGITPS---LKW-TEATQKFPYVIFCAP 151 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG------~~V~~l~R~~-~~~~~l~~~~v~~d---~~d-~~~~~~~D~Vi~~a~ 151 (267)
.|++|.|+|.|--|.+=+..|++. | ..|++--|.. .........|++.. +.+ .++...+|+|..+.+
T Consensus 43 g~KkIaViGYGsQG~AhAlNLrDS--G~~~~sgv~V~VGLr~gs~S~~kA~~dGf~v~~~~v~~v~EAv~~ADiVmiLlP 120 (226)
T d1qmga2 43 GIKQIGVIGWGSQAPAQAQNLKDS--LTEAKSDVVVKIGLRKGSNSFAEARAAGFSEENGTLGDMWETISGSDLVLLLIS 120 (226)
T ss_dssp TCSEEEEECCSSHHHHHHHHHHHH--HHHTTCCCEEEEEECTTCSCHHHHHHTTCCGGGTCEEEHHHHHHTCSEEEECSC
T ss_pred CCCEEEEEEeccHHHHHHHhChhh--cccccCCceEEEEeCCCChhHHHHHHcCCccCCCcccCHHHHHhhCCEEEEecc
Confidence 458999999999999999999995 5 5565555543 33333344565432 222 246788999999886
Q ss_pred C
Q 024494 152 P 152 (267)
Q Consensus 152 ~ 152 (267)
.
T Consensus 121 D 121 (226)
T d1qmga2 121 D 121 (226)
T ss_dssp H
T ss_pred h
Confidence 4
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=84.41 E-value=0.46 Score=39.49 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=30.3
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
..|+|+|+|..|...+-++.++ |.+|+++.+.+
T Consensus 20 ~DVvVIGaG~aGl~AA~~aa~~--G~~V~vlEK~~ 52 (317)
T d1qo8a2 20 TQVLVVGAGSAGFNASLAAKKA--GANVILVDKAP 52 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--TCCEEEECSSS
T ss_pred cCEEEECcCHHHHHHHHHHHHC--CCcEEEEeCCC
Confidence 4699999999999999999999 99999998764
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=83.38 E-value=0.88 Score=36.79 Aligned_cols=32 Identities=16% Similarity=0.261 Sum_probs=28.0
Q ss_pred CCeEEEEcccHHhHHHHHHHH-hcCCCCeEEEEeC
Q 024494 84 ENDLLIVGPGVLGRLVAEQWR-QEHPGCQIYGQTM 117 (267)
Q Consensus 84 m~~ILV~GaG~IG~~La~~L~-~~~pG~~V~~l~R 117 (267)
.++|+|=|.|.+|+++++.|. +. |..|++++-
T Consensus 31 g~~vaIqG~GnVG~~~a~~L~~e~--Ga~vv~vsd 63 (234)
T d1b26a1 31 KATVAVQGFGNVGQFAALLISQEL--GSKVVAVSD 63 (234)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHH--CCEEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhc--CCceEEeec
Confidence 478999999999999999996 57 899988874
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=83.35 E-value=0.62 Score=34.90 Aligned_cols=31 Identities=29% Similarity=0.259 Sum_probs=28.2
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.|+|+|+|..|...+-.+.+. |.+|..+.++
T Consensus 3 DViIIGgGpaGl~AAi~aar~--G~~v~iie~~ 33 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARK--GIRTGLMGER 33 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTT--TCCEEEECSS
T ss_pred cEEEECcCHHHHHHHHHHHHc--CCeEEEEEEe
Confidence 489999999999999999998 9999999874
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.97 E-value=1.1 Score=36.21 Aligned_cols=35 Identities=17% Similarity=0.281 Sum_probs=28.6
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
.-++|+|-|.|.+|+++++.|.++. |..|++++-.
T Consensus 31 ~g~~v~IqGfGnVG~~~a~~L~~~~-G~kvv~vsD~ 65 (239)
T d1gtma1 31 KGKTIAIQGYGNAGYYLAKIMSEDF-GMKVVAVSDS 65 (239)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTT-CCEEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhc-Ccceeecccc
Confidence 3488999999999999999997532 8888887654
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=82.05 E-value=0.53 Score=36.09 Aligned_cols=32 Identities=19% Similarity=-0.014 Sum_probs=29.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMT 118 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~ 118 (267)
++|+|+|+|..|...+-.|.+. |.+|+++.+.
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~--g~~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARA--ELKPLLFEGW 37 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHT--TCCCEEECCS
T ss_pred ceEEEECCCHHHHHHHHHHHHc--CCcEEEEEee
Confidence 6899999999999999999999 9999999864
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.27 E-value=0.85 Score=35.18 Aligned_cols=32 Identities=22% Similarity=0.220 Sum_probs=29.0
Q ss_pred eEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 86 DLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 86 ~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.|+|+|+|..|...+..+.+. |.+|.++.+..
T Consensus 5 DviIIG~GpaG~~aA~~aar~--G~kV~vIEk~~ 36 (221)
T d3grsa1 5 DYLVIGGGSGGLASARRAAEL--GARAAVVESHK 36 (221)
T ss_dssp SEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC
T ss_pred CEEEECCCHHHHHHHHHHHHC--CCEEEEEeccC
Confidence 489999999999999999999 99999998743
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=80.78 E-value=0.84 Score=35.78 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=27.1
Q ss_pred CCCeEEEEcccHHhHHHHHHHHhcC---CCCeEEEEeC
Q 024494 83 GENDLLIVGPGVLGRLVAEQWRQEH---PGCQIYGQTM 117 (267)
Q Consensus 83 ~m~~ILV~GaG~IG~~La~~L~~~~---pG~~V~~l~R 117 (267)
|++||.|=|-|-||+.+.+.+.++. +..+|.++.-
T Consensus 1 M~ikigINGFGRIGR~vlR~~~~~~~~~~~i~iv~Ind 38 (190)
T d1k3ta1 1 MPIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVD 38 (190)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCBTTTEEEEEEEE
T ss_pred CCeEEEEECCChHHHHHHHHHHHcCCCCCCeEEEEEec
Confidence 5689999999999999999988751 2346666543
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=80.53 E-value=0.8 Score=39.41 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=30.0
Q ss_pred CeEEEEcccHHhHHHHHHHHh------cCCCCeEEEEeCCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQ------EHPGCQIYGQTMTAD 120 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~------~~pG~~V~~l~R~~~ 120 (267)
-.|+|+|+|.-|...|..|.+ + |++|.++.|...
T Consensus 33 ~DViIVGgGPAGlsaA~~LA~l~~~~~~--Gl~VlllEK~~~ 72 (380)
T d2gmha1 33 ADVVIVGAGPAGLSAATRLKQLAAQHEK--DLRVCLVEKAAH 72 (380)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTC--CCCEEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhhhhhcC--CCEEEEEcCCCC
Confidence 369999999999999999986 6 999999998643
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=80.50 E-value=0.93 Score=34.80 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=29.7
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
-.|+|+|+|..|...+..+.+. |.+|..+.+..
T Consensus 4 ~DviVIG~GpaGl~aA~~aar~--G~kV~vIEk~~ 36 (223)
T d1ebda1 4 TETLVVGAGPGGYVAAIRAAQL--GQKVTIVEKGN 36 (223)
T ss_dssp CSEEEECCSHHHHHHHHHHHHT--TCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHC--CCEEEEEecCC
Confidence 4699999999999999999999 99999998753
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=80.28 E-value=1.2 Score=30.68 Aligned_cols=33 Identities=15% Similarity=0.169 Sum_probs=27.2
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
|||||+|.|-=--+|+..|.+. .++|++.--++
T Consensus 1 MkVLviGsGgREHAia~~l~~s--~~~v~~~pGN~ 33 (90)
T d1vkza2 1 VRVHILGSGGREHAIGWAFAKQ--GYEVHFYPGNA 33 (90)
T ss_dssp CEEEEEECSHHHHHHHHHHHHT--TCEEEEEECCT
T ss_pred CEEEEECCCHHHHHHHHHHhcC--CCeEEEecCCc
Confidence 7999999987777889999888 78999875443
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=80.16 E-value=0.64 Score=35.37 Aligned_cols=33 Identities=27% Similarity=0.159 Sum_probs=29.6
Q ss_pred CeEEEEcccHHhHHHHHHHHhcCCCCeEEEEeCCC
Q 024494 85 NDLLIVGPGVLGRLVAEQWRQEHPGCQIYGQTMTA 119 (267)
Q Consensus 85 ~~ILV~GaG~IG~~La~~L~~~~pG~~V~~l~R~~ 119 (267)
.+|+|+|.|..|..-+..|.+. |.+|+.+.+..
T Consensus 6 ~dVvIIGGGpaGl~AA~~~ar~--g~~v~iie~~~ 38 (190)
T d1trba1 6 SKLLILGSGPAGYTAAVYAARA--NLQPVLITGME 38 (190)
T ss_dssp EEEEEECCSHHHHHHHHHHHTT--TCCCEEECCSS
T ss_pred CcEEEECCCHHHHHHHHHHHHc--CCceEEEEeec
Confidence 6799999999999999999998 99999998643
|