Citrus Sinensis ID: 024499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
Protein Sequence
MALEALNSPTTNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFDLNLPALPEFWSQEVESPLPAKKPKLLMHYSSLED
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHcccccccccccccccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEcccccccccHHHcccccccccccccccccccccccccccccccccccccccccccEEccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccHHHccccccccccEEEEEcccccc
Coil and Loop (DISEMBL)
malealnspttnthnhhpfryedswtkrrrskrprtdespplppavaaptEEEYMALCLIMLArgtttantapaertpslapeqrpqdqfpeppslklsykcsVCNKAFSSyqalgghkashrknaadasaspnaaaasdvtpppsatassgsggrthecsichksfptgqalgghkrchyegginnnnnnsssnnnksnnnsdvvtsgsasvgasavtfsegggsssqrgfdlnlpalpefwsqevesplpakkpkllMHYSSLED
Flexible Loop (DISEMBL)
malealnspttnthnhhpfryedswtkrrrskrprtdespplppavaaptEEEYMALCLIMLARGTTTANTAPAertpslapeqrpqDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPnaaaasdvtpppSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFsegggsssqRGFDLNLPALPEFWSQEvesplpakkpkllmhyssled
Low Complexity Region (SEG)
MALEALNSPTTNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKnaadasaspnaaaasdvtpppsatassgsggrtHECSICHKSFPTGQALGGHKRCHYEGGInnnnnnsssnnnksnnnsDvvtsgsasvgasavtFSEGGGSSSQRGFDLNLPALPEFWSQEVESPLPAKKPKLLMHYSSLED
Disordered region (IsUnstruct)
****************************************************EYMALCLIMLARGT*******************************LSYKCSVCNKAFSSY*************************************************ICH*******************************************************************************************************
Disordered Region (DISOPRED)
*ALEA**************************************************************************************************VCNKAFSSYQALGG******************************************CSICHKSFPTGQALGGHK*****************************************************GFDLNLPALP**************KP*LLMHYSSL**
Disordered Region (DISEMBL)
************THNHHPFRYED********************PAVAAPTEEEYMALCLIMLARGTT*************************PPSLKLSYKCSVCNKAFSSYQ*********************************************ECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAV***********RGFDLNLPALPEFWSQEVESPLPAKKPKLLMHYSSLED
Disordered Region (DISPRO)
*******************RYE***************************TEEEYMALCLIMLARG******************************LKLSYKCSVCNKAFSSYQAL*****************************************THECSICHKSFPTGQALGGH***************************************************SQRGFDLNLPALPEFWSQEVESPLPAKKPKLLMHYSSL**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALEALNSPTTNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFDLNLPALPEFWSQEVESPLPAKKPKLLMHYSSLED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	267	2.2.26 [Sep-21-2011]
Q96289	227	Zinc finger protein ZAT10	yes	no	0.752	0.885	0.438	3e-42
Q9SSW2	273	Zinc finger protein AZF2	no	no	0.846	0.827	0.393	2e-36
O22533	238	Zinc finger protein ZAT6	no	no	0.831	0.932	0.402	4e-35
Q9SSW1	245	Zinc finger protein AZF1	no	no	0.820	0.893	0.410	9e-35
Q9SSW0	193	Zinc finger protein AZF3	no	no	0.704	0.974	0.389	4e-33
Q42430	261	Zinc finger protein 1 OS=	N/A	no	0.674	0.689	0.418	2e-32
Q9M202	288	Zinc finger protein ZAT9	no	no	0.636	0.590	0.333	2e-19
Q681X4	286	Zinc finger protein ZAT5	no	no	0.490	0.458	0.380	2e-18
Q9SHD0	314	Zinc finger protein ZAT4	no	no	0.580	0.493	0.322	4e-18
Q9SIJ0	270	Zinc finger protein ZAT2	no	no	0.415	0.411	0.312	7e-14

>sp|Q96289|ZAT10_ARATH Zinc finger protein ZAT10 OS=Arabidopsis thaliana GN=ZAT10 PE=2 SV=1

 Score =  172 bits (435), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/276 (43%), Positives = 148/276 (53%), Gaps = 75/276 (27%)

Query: 1   MALEALNSPTTNTHNHHPFRYEDS--------WTKRRRSKRPRTDESPPLPPAVAAPTEE 52
           MALEAL SP   +    P  +EDS        WTK +RSKR R+D            TEE
Sbjct: 1   MALEALTSPRLASPI--PPLFEDSSVFHGVEHWTKGKRSKRSRSDFHH------QNLTEE 52

Query: 53  EYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSL-KLSYKCSVCNKAFSS 111
           EY+A CL++LAR           R P            P PP++ KLSYKCSVC+K FSS
Sbjct: 53  EYLAFCLMLLARDN---------RQP------------PPPPAVEKLSYKCSVCDKTFSS 91

Query: 112 YQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ 171
           YQALGGHKASHRKN +   +          +   + +A +   G++H C+IC+KSFP+GQ
Sbjct: 92  YQALGGHKASHRKNLSQTLS--GGGDDHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQ 149

Query: 172 ALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGG-----S 226
           ALGGHKRCHYEG   NNN N+SS +N                       SEG G     S
Sbjct: 150 ALGGHKRCHYEG---NNNINTSSVSN-----------------------SEGAGSTSHVS 183

Query: 227 SSQRGFDLNLPALPEF----WSQEVESPLPAKKPKL 258
           SS RGFDLN+P +PEF       EV SP+PAKKP+ 
Sbjct: 184 SSHRGFDLNIPPIPEFSMVNGDDEVMSPMPAKKPRF 219

Transcriptional repressor involved in abiotic stress responses. Can repress the stress responsive genes DREB1A and LTI78. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW2|AZF2_ARATH Zinc finger protein AZF2 OS=Arabidopsis thaliana GN=AZF2 PE=2 SV=1

 Score =  152 bits (385), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/290 (39%), Positives = 141/290 (48%), Gaps = 64/290 (22%)

Query: 1   MALEALNSPT-------TNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAP---- 49
           MALEA+N+PT       T     +   + + W KR+RSKR R+        +        
Sbjct: 1   MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKS 60

Query: 50  -----TEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSV 104
                TEEEY+ALCL+MLA+   +               Q+ Q   P P S  L YKC+V
Sbjct: 61  QNQDLTEEEYLALCLLMLAKDQPSQTRF----------HQQSQSLTPPPESKNLPYKCNV 110

Query: 105 CNKAFSSYQALGGHKASHR-------KNAADASASPNAAAASDVTPPPSATASSGSGGRT 157
           C KAF SYQALGGHKASHR          AD S +P  +  +    P +A+      G+ 
Sbjct: 111 CEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAAS------GKI 164

Query: 158 HECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASA 217
           HECSICHK FPTGQALGGHKRCHYEG +       S + + S + S  V+          
Sbjct: 165 HECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTVSE--------- 215

Query: 218 VTFSEGGGSSSQRGF-DLNLPALPEF-------WSQEVESPLPAKKPKLL 259
                     S RGF DLNLPALPE          +E+ SPL  KKP LL
Sbjct: 216 --------ERSHRGFIDLNLPALPELSLHHNPIVDEEILSPLTGKKPLLL 257

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner. Acts as a negative regulator of abscisic acid (ABA) signaling during seed germination. Probably involved in jasmonate (JA) early signaling response. May regulate the expression of the JA biosynthesis gene LOX3 and control the expression of TIFY10A/JAZ1, a key repressor in the JA signaling cascade. May act as a positive regulator of leaf senescence. Has been identified as a suppressor of the deficiency of yeast snf4 mutant to grow on non-fermentable carbon source.

Arabidopsis thaliana (taxid: 3702)

>sp|O22533|ZAT6_ARATH Zinc finger protein ZAT6 OS=Arabidopsis thaliana GN=ZAT6 PE=2 SV=1

 Score =  148 bits (373), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/268 (40%), Positives = 139/268 (51%), Gaps = 46/268 (17%)

Query: 1   MALEALNSPTTNTHNHHPFRYEDS-----WTKRRRSKRPRTDESPPLPPAVAAPTEEEYM 55
           MALE L SP  ++    P  ++DS      +K +RSKR R++          + TE+EY+
Sbjct: 1   MALETLTSPRLSSPM--PTLFQDSALGFHGSKGKRSKRSRSEFDR------QSLTEDEYI 52

Query: 56  ALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQAL 115
           ALCL++LAR          +R   L            PP     YKCSVC+KAFSSYQAL
Sbjct: 53  ALCLMLLAR--------DGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQAL 104

Query: 116 GGHKASHRKN-AADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALG 174
           GGHKASHRK+ +   SA  +  + S        +   G   ++H CSICHKSF TGQALG
Sbjct: 105 GGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALG 164

Query: 175 GHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFDL 234
           GHKRCHYEG      ++S SN+    + S V                    SS  RGFDL
Sbjct: 165 GHKRCHYEGKNGGGVSSSVSNSEDVGSTSHV--------------------SSGHRGFDL 204

Query: 235 NLPALPEF----WSQEVESPLPAKKPKL 258
           N+P +PEF      +EV SP+PAKK + 
Sbjct: 205 NIPPIPEFSMVNGDEEVMSPMPAKKLRF 232

Probable transcription factor that regulates root development and phosphate (Pi) acquisition and homeostasis. Probably acts as a repressor of primary root growth and regulates Pi homeostasis through the control of root architecture.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW1|AZF1_ARATH Zinc finger protein AZF1 OS=Arabidopsis thaliana GN=AZF1 PE=2 SV=1

 Score =  147 bits (371), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/256 (41%), Positives = 133/256 (51%), Gaps = 37/256 (14%)

Query: 1   MALEALNSPTTNTHNHHPFRYED--------SWTKRRRSKRPRTDESPPLPPAVA-APTE 51
           MALE LNSPT  T      RY +         W KR+R+KR R D            P+E
Sbjct: 1   MALETLNSPTATTTARPLLRYREEMEPENLEQWAKRKRTKRQRFDHGHQNQETNKNLPSE 60

Query: 52  EEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSS 111
           EEY+ALCL+MLARG+   +          +P            S    YKC+VC K+FSS
Sbjct: 61  EEYLALCLLMLARGSAVQSPPLPPLPSRASP------------SDHRDYKCTVCGKSFSS 108

Query: 112 YQALGGHKASHRKNAADASASPN-----AAAASDVTPPPSATASSGSG----GRTHECSI 162
           YQALGGHK SHRK    +  S N      + ++  +   + T ++G+G    G+ H CSI
Sbjct: 109 YQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSI 168

Query: 163 CHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSE 222
           C KSF +GQALGGHKRCHY+GG N N N SSSN+ +       + +GS         +SE
Sbjct: 169 CFKSFASGQALGGHKRCHYDGGNNGNGNGSSSNSVE-------LVAGSDVSDVDNERWSE 221

Query: 223 GGGSSSQRGFDLNLPA 238
                  RGFDLNLPA
Sbjct: 222 ESAIGGHRGFDLNLPA 237

Transcriptional repressor involved in the inhibition of plant growth under abiotic stress conditions. Can repress the expression of various genes, including osmotic stress and abscisic acid-repressive genes and auxin-inducible genes, by binding to their promoter regions in a DNA sequence-specific manner.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSW0|AZF3_ARATH Zinc finger protein AZF3 OS=Arabidopsis thaliana GN=AZF3 PE=1 SV=1

 Score =  141 bits (356), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/262 (38%), Positives = 128/262 (48%), Gaps = 74/262 (28%)

Query: 1   MALEALNSPTTNTHNHHPFRYE--DSWTK-RRRSKRPRTDESPPLPPAVAAPTEEEYMAL 57
           MALEALNSP        P R+   + WTK ++RSKR R+D            TEEEY+A 
Sbjct: 1   MALEALNSPRLV---EDPLRFNGVEQWTKCKKRSKRSRSDLHHN-----HRLTEEEYLAF 52

Query: 58  CLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGG 117
           CL++LAR     ++      PS                    YKC VC K FSSYQALGG
Sbjct: 53  CLMLLARDGGDLDSVTVAEKPS--------------------YKCGVCYKTFSSYQALGG 92

Query: 118 HKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHK 177
           HKASHR        S      +D + P +A        ++H CS+C KSF TGQALGGHK
Sbjct: 93  HKASHR--------SLYGGGENDKSTPSTAV-------KSHVCSVCGKSFATGQALGGHK 137

Query: 178 RCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFDLNLP 237
           RCHY+GG++N                      S  VG+++        SSS RGFDLN+ 
Sbjct: 138 RCHYDGGVSN----------------------SEGVGSTSHV-----SSSSHRGFDLNII 170

Query: 238 ALPEFW-SQEVESPLPAKKPKL 258
            +  F    EV SP+  KKP+L
Sbjct: 171 PVQGFSPDDEVMSPMATKKPRL 192

Transcriptional repressor probably involved in abiotic stress responses. Binds DNA in a sequence-specific manner and can repress the transactivation activity of other transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q42430|ZFP1_WHEAT Zinc finger protein 1 OS=Triticum aestivum PE=2 SV=1

 Score =  139 bits (351), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/234 (41%), Positives = 125/234 (53%), Gaps = 54/234 (23%)

Query: 51  EEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFS 110
           EEE +ALCL+ML+RG      AP        PE      F  P  +   +KCSVC K+FS
Sbjct: 55  EEENLALCLLMLSRGGKQRVQAPQ-------PES-----FAAP--VPAEFKCSVCGKSFS 100

Query: 111 SYQALGGHKASHRKNA----ADASASPNAAAASDVTPPPSA--------TASSGSGGRTH 158
           SYQALGGHK SHR       +DA+A+P  A  +     PSA         +S G+  R H
Sbjct: 101 SYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASSDGATNRVH 160

Query: 159 ECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAV 218
            CSIC K FPTGQALGGHKR HY+GG+     +S+     +   S+V ++G+        
Sbjct: 161 RCSICQKEFPTGQALGGHKRKHYDGGV-GAAASSTELLAAAAAESEVGSTGN-------- 211

Query: 219 TFSEGGGSSSQRGFDLNLPALPEF-W------------SQEVESPLPAKKPKLL 259
                 GSS+ R FDLN+PA+PEF W             +EV+SPL  KKP+LL
Sbjct: 212 ------GSSAARAFDLNIPAVPEFVWRPCAKGKMMWEDDEEVQSPLAFKKPRLL 259

Potential transcription factor which binds the nonamer motif 5'-CATCCAACG-3'. Possibly involved in regulating transcription of the histone H3 and H4 genes.

Triticum aestivum (taxid: 4565)

>sp|Q9M202|ZAT9_ARATH Zinc finger protein ZAT9 OS=Arabidopsis thaliana GN=ZAT9 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 89/207 (42%), Gaps = 37/207 (17%)

Query: 33  RPRTDESPPLPPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQD-QFP 91
           +P +D+ PP   A    TEE+ +A CL+ML+R     N +  E    +  E+  +     
Sbjct: 106 KPESDQEPPHSSASDTTTEED-LAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKI 164

Query: 92  EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASS 151
              + K  YKC  C K F SYQALGGH+ASH+KN      S N       T   +    +
Sbjct: 165 NRATTKGRYKCETCGKVFKSYQALGGHRASHKKN----RVSNNKTEQRSETEYDNVVVVA 220

Query: 152 GSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSA 211
               R HEC IC + F +GQALGGHKR H  G ++ N       N               
Sbjct: 221 ---KRIHECPICLRVFASGQALGGHKRSHGVGNLSVNQQRRVHRNE-------------- 263

Query: 212 SVGASAVTFSEGGGSSSQRGFDLNLPA 238
                         S  QR  DLNLPA
Sbjct: 264 --------------SVKQRMIDLNLPA 276

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q681X4|ZAT5_ARATH Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/155 (38%), Positives = 74/155 (47%), Gaps = 24/155 (15%)

Query: 43  PPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKC 102
           P       EEE MA+CLIMLARGT          +P L   ++   +     S    Y+C
Sbjct: 65  PVTTDCTQEEEDMAICLIMLARGTVLP-------SPDLKNSRKIHQKISSENSSFYVYEC 117

Query: 103 SVCNKAFSSYQALGGHKASHRKNAADAS-------ASPNAAAA-----SDVTPPPSATAS 150
             CN+ FSS+QALGGH+ASH+K               P ++A+     S      SA AS
Sbjct: 118 KTCNRTFSSFQALGGHRASHKKPRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALAS 177

Query: 151 SGS-----GGRTHECSICHKSFPTGQALGGHKRCH 180
             S       + HECSIC   F +GQALGGH R H
Sbjct: 178 QASNIINKANKVHECSICGSEFTSGQALGGHMRRH 212

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHD0|ZAT4_ARATH Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1

 Score = 92.0 bits (227), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/189 (32%), Positives = 81/189 (42%), Gaps = 34/189 (17%)

Query: 50  TEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAF 109
           T EE +A CLIML+R          +R      +   +D   +    +  +KC  C K F
Sbjct: 146 TTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDY--KSSKSRGRFKCETCGKVF 203

Query: 110 SSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT 169
            SYQALGGH+ASH+KN A  + +        +              + HEC IC + F +
Sbjct: 204 KSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEK---------KVHECPICFRVFTS 254

Query: 170 GQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQ 229
           GQALGGHKR H   G N                   + +G   +  S +   E   S  Q
Sbjct: 255 GQALGGHKRSH---GSN-------------------IGAGRG-LSVSQIVQIEEEVSVKQ 291

Query: 230 RGFDLNLPA 238
           R  DLNLPA
Sbjct: 292 RMIDLNLPA 300

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SIJ0|ZAT2_ARATH Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 30/141 (21%)

Query: 49  PTEEEY-MALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNK 107
           P+EEE+ +A CL+M+A G     ++  E                        ++C  C K
Sbjct: 118 PSEEEHNIASCLLMMANGDVPTRSSEVEE----------------------RFECDGCKK 155

Query: 108 AFSSYQALGGHKASHRKNAADASASPNAA------AASDVTPPPSATASSGSGGRTHECS 161
            F S+QALGGH+A+H K+     A+ N           ++       +     G  H C+
Sbjct: 156 VFGSHQALGGHRATH-KDVKGCFANKNITEDPPPPPPQEIVDQDKGKSVKLVSGMNHRCN 214

Query: 162 ICHKSFPTGQALGGHKRCHYE 182
           IC + F +GQALGGH RCH+E
Sbjct: 215 ICSRVFSSGQALGGHMRCHWE 235

Probable transcription factor that may be involved in stress responses.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
224060749	240	predicted protein [Populus trichocarpa]	0.812	0.904	0.516	5e-57
225458814	233	PREDICTED: zinc finger protein ZAT10-lik	0.771	0.884	0.530	1e-55
147838864	233	hypothetical protein VITISV_013327 [Viti	0.771	0.884	0.530	1e-55
255573145	252	zinc finger protein, putative [Ricinus c	0.816	0.865	0.518	3e-55
449447055	262	PREDICTED: zinc finger protein ZAT10-lik	0.850	0.866	0.496	8e-55
302398683	246	C2H2L domain class transcription factor	0.752	0.817	0.466	3e-54
4666360	247	zinc-finger protein 1 [Datisca glomerata	0.876	0.947	0.507	7e-54
33771374	253	zinc finger protein PIF1 [Nicotiana bent	0.842	0.889	0.501	4e-53
171452000	252	zinc-finger protein [Bruguiera gymnorhiz	0.857	0.908	0.478	2e-51
255538086	256	zinc finger protein, putative [Ricinus c	0.820	0.855	0.489	3e-51

>gi|224060749|ref|XP_002300263.1| predicted protein [Populus trichocarpa] gi|222847521|gb|EEE85068.1| predicted protein [Populus trichocarpa]

 Score =  227 bits (578), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/271 (51%), Positives = 171/271 (63%), Gaps = 54/271 (19%)

Query: 1   MALEALNSPTTNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLI 60
           MALEALNSPTT      PF YE++W KR+RSKRPR+ ESP         TEEEY+ALCLI
Sbjct: 1   MALEALNSPTTAA----PFNYEETWIKRKRSKRPRS-ESPS--------TEEEYLALCLI 47

Query: 61  MLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKA 120
           MLARG    + AP                 P+PP+L LSYKC+VCNKAFSSYQALGGHKA
Sbjct: 48  MLARG---GSPAP-----------------PQPPTLDLSYKCTVCNKAFSSYQALGGHKA 87

Query: 121 SHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCH 180
           SHRK++++++ +   AA +  T   + T ++ + GRTHECSICHK+F TGQALGGHKRCH
Sbjct: 88  SHRKSSSESTVA--TAAENPSTSTTTNTTTTTTNGRTHECSICHKTFLTGQALGGHKRCH 145

Query: 181 YEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFDLNLPALP 240
           YEG I  NN++S+S        + + TS   +VG   V  S+   S     FDLNLPALP
Sbjct: 146 YEGTIGGNNSSSAS--------AAITTSDGGAVGGGGVIQSKSQRSGGGFDFDLNLPALP 197

Query: 241 EF-----------WSQEVESPLPAKKPKLLM 260
           EF             QEVESPLP KKP+L+ 
Sbjct: 198 EFEGPRISLQALCGDQEVESPLPGKKPRLMF 228

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458814|ref|XP_002285260.1| PREDICTED: zinc finger protein ZAT10-like [Vitis vinifera]

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/275 (53%), Positives = 163/275 (59%), Gaps = 69/275 (25%)

Query: 1   MALEALNSPTTNTHNHHPFRYE-------DSWTKRRRSKRPRTDESPPLPPAVAAPTEEE 53
           MALEALNSPTT T +   F YE       +SW KR+RSKRPR D  P         TEEE
Sbjct: 1   MALEALNSPTTPTPS---FHYEQPSLHSLESWAKRKRSKRPRFDNQP---------TEEE 48

Query: 54  YMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQ 113
           Y+ALCLIMLARG   A+T    R   L+P    Q + P     KL+YKCSVCNKAF+SYQ
Sbjct: 49  YLALCLIMLARGGAAASTVSHRR--HLSPPPALQVEAP-----KLTYKCSVCNKAFASYQ 101

Query: 114 ALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL 173
           ALGGHKASHRK +     S +    S        TA++ SGGRTHECSICHK+FPTGQAL
Sbjct: 102 ALGGHKASHRKQSGSDDLSASITTTS--------TAAAASGGRTHECSICHKTFPTGQAL 153

Query: 174 GGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSS-SQRGF 232
           GGHKRCHYEGG                          ASV +S VT SEG GS+ S R F
Sbjct: 154 GGHKRCHYEGG--------------------------ASV-SSGVTSSEGVGSTHSHRDF 186

Query: 233 DLNLPALPEFWS-------QEVESPLPAKKPKLLM 260
           DLNLPA PE WS        EVESPLP KKP+L M
Sbjct: 187 DLNLPAFPELWSARRFPVDDEVESPLPTKKPRLQM 221

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838864|emb|CAN61394.1| hypothetical protein VITISV_013327 [Vitis vinifera]

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/275 (53%), Positives = 163/275 (59%), Gaps = 69/275 (25%)

Query: 1   MALEALNSPTTNTHNHHPFRYE-------DSWTKRRRSKRPRTDESPPLPPAVAAPTEEE 53
           MALEALNSPTT T +   F YE       +SW KR+RSKRPR D  P         TEEE
Sbjct: 1   MALEALNSPTTPTPS---FHYEQPSLHSLESWAKRKRSKRPRFDNQP---------TEEE 48

Query: 54  YMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQ 113
           Y+ALCLIMLARG   A+T    R   L+P    Q + P     KL+YKCSVCNKAF+SYQ
Sbjct: 49  YLALCLIMLARGGAAASTVSHRR--HLSPPPALQVEAP-----KLTYKCSVCNKAFASYQ 101

Query: 114 ALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL 173
           ALGGHKASHRK +     S +    S        TA++ SGGRTHECSICHK+FPTGQAL
Sbjct: 102 ALGGHKASHRKQSGSDDLSASITTTS--------TAAAASGGRTHECSICHKTFPTGQAL 153

Query: 174 GGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSS-SQRGF 232
           GGHKRCHYEGG                          ASV +S VT SEG GS+ S R F
Sbjct: 154 GGHKRCHYEGG--------------------------ASV-SSGVTSSEGVGSTHSHRDF 186

Query: 233 DLNLPALPEFWS-------QEVESPLPAKKPKLLM 260
           DLNLPA PE WS        EVESPLP KKP+L M
Sbjct: 187 DLNLPAFPELWSARRFPVDDEVESPLPTKKPRLQM 221

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573145|ref|XP_002527502.1| zinc finger protein, putative [Ricinus communis] gi|223533142|gb|EEF34900.1| zinc finger protein, putative [Ricinus communis]

 Score =  221 bits (563), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/276 (51%), Positives = 173/276 (62%), Gaps = 58/276 (21%)

Query: 1   MALEALNSPTTNTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLI 60
           MALEALNSPTT T    PF YED+WTKR+RSKRPR+ ESP       APTEEEY+ALCLI
Sbjct: 1   MALEALNSPTTAT----PFNYEDTWTKRKRSKRPRS-ESP-------APTEEEYLALCLI 48

Query: 61  MLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKA 120
           MLARG  + +T+ +  T + A    P    P+PP+L LSYKC+VCNKAF SYQALGGHKA
Sbjct: 49  MLARGGNSTSTSTSTSTSTSAKSASPSPPPPQPPALNLSYKCTVCNKAFPSYQALGGHKA 108

Query: 121 SHRKNAADASASPN-AAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRC 179
           SH+K++++ +   N + + +  +  P+AT+     GRTHECSICHK+FPTGQALGGHKR 
Sbjct: 109 SHKKSSSETATIDNPSTSTTTASAVPTATS-----GRTHECSICHKTFPTGQALGGHKRR 163

Query: 180 HYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSS-------QRG- 231
           HYE                          G  +   S +T SEGG S++        RG 
Sbjct: 164 HYE-----------------------GPGGGNNNTNSTITSSEGGASATQSQSQSQSRGG 200

Query: 232 --FDLNLPALPEFWS-------QEVESPLPAKKPKL 258
              DLNLPALPEFWS       QEVESPLP KKP+L
Sbjct: 201 FEIDLNLPALPEFWSANNNGRDQEVESPLPGKKPRL 236

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447055|ref|XP_004141285.1| PREDICTED: zinc finger protein ZAT10-like [Cucumis sativus] gi|449532956|ref|XP_004173443.1| PREDICTED: zinc finger protein ZAT10-like [Cucumis sativus]

 Score =  219 bits (559), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/284 (49%), Positives = 180/284 (63%), Gaps = 57/284 (20%)

Query: 1   MALEALNSPTTNTHNHHPFRYED-------SWTKRRRSKRPRTDESPPLPPAVAAPTEEE 53
           MALEALNSPTT +   H   Y+D       SW+KR+R+KRPR  ++PP        TEEE
Sbjct: 1   MALEALNSPTTPSPALH---YDDPNLNSFESWSKRKRTKRPRGFDNPP--------TEEE 49

Query: 54  YMALCLIMLARGTTTANTAPAERTPSLAPEQRPQD-QFPEPPS----LKLSYKCSVCNKA 108
           Y+ALCLIMLARG  TAN+              P D + P P      +KLSYKCSVC+KA
Sbjct: 50  YLALCLIMLARGGATANSD----------SDHPLDYEVPIPAQPISVVKLSYKCSVCDKA 99

Query: 109 FSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFP 168
           FSSYQALGGHKASHRK+A   +    + +++  T   +   ++ +G ++H+CSICHKSFP
Sbjct: 100 FSSYQALGGHKASHRKSA---TGEDQSTSSTTTTSATATATATVAGAKSHQCSICHKSFP 156

Query: 169 TGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSS- 227
           TGQALGGHKRCHY+GG++NNNN++ S+ N +NNN++  T        + VT SEG GS+ 
Sbjct: 157 TGQALGGHKRCHYDGGLSNNNNHTQSHPNNNNNNNNAAT--------APVTSSEGVGSTH 208

Query: 228 ----SQRGFDLNLPALPEF--------WSQEVESPLPAKKPKLL 259
               S R FDLNLPALPE            EV+SPLP KKP++L
Sbjct: 209 TQSHSHRDFDLNLPALPELSPGFFISAGDDEVQSPLPLKKPRIL 252

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302398683|gb|ADL36636.1| C2H2L domain class transcription factor [Malus x domestica]

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/302 (46%), Positives = 169/302 (55%), Gaps = 101/302 (33%)

Query: 1   MALEALNSPTTNTHNHHPFR-YEDS---------------WTKRRRSKRPRTDESPPLPP 44
           MALEAL S +T T+   PF  +E++               W KR+RSKRPR+++      
Sbjct: 1   MALEALKSASTTTNTSPPFSSFEEADDRRQANHQIHSKEPWAKRKRSKRPRSED------ 54

Query: 45  AVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSV 104
               PTEEEY+ALCLIMLARGTT A T  +  +P+            +PPS +LSYKCSV
Sbjct: 55  ---PPTEEEYLALCLIMLARGTTAAVTTSSSESPA------------QPPSGELSYKCSV 99

Query: 105 CNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSG--SGGRTHECSI 162
           CNK FSSYQALGGHKASHRK       S ++AAA+     P A AS+G  +  RTHECSI
Sbjct: 100 CNKGFSSYQALGGHKASHRK-------SDSSAAAAATVDHPIAAASAGPATSARTHECSI 152

Query: 163 CHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSE 222
           CHK+FPTGQALGGHKRCHY+GG                               SAVT SE
Sbjct: 153 CHKTFPTGQALGGHKRCHYDGG-------------------------------SAVTTSE 181

Query: 223 GGGSSS-----------QRGFDLNLPALPEFW-------------SQEVESPLPAKKPKL 258
           GGG+ +           QRGFDLNLPALPEFW              QEV+SP+ AKKP+ 
Sbjct: 182 GGGAGASSHSQSQSHQSQRGFDLNLPALPEFWPGFGADKKSQLSGEQEVQSPMVAKKPRW 241

Query: 259 LM 260
           L+
Sbjct: 242 LL 243

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4666360|gb|AAD26942.1|AF119050_1 zinc-finger protein 1 [Datisca glomerata]

 Score =  216 bits (551), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 138/272 (50%), Positives = 167/272 (61%), Gaps = 38/272 (13%)

Query: 1   MALEALNSPTTNT---HNHHP-FRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEYMA 56
           MALEALNSPTT T   H   P   Y + WTKR+RSKR R D SP         TEEEY+A
Sbjct: 1   MALEALNSPTTATPVFHYDDPSLNYLEPWTKRKRSKRTRLD-SPH--------TEEEYLA 51

Query: 57  LCLIMLARG-TTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQAL 115
            CLIMLARG   +AN   ++ +  + PE           + K+SYKCSVC+KAFSSYQAL
Sbjct: 52  FCLIMLARGRVASANRRDSQSSIQIQPE-------ATTSATKVSYKCSVCDKAFSSYQAL 104

Query: 116 GGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGG 175
           GGHKASHRK A     S + A  +  T   +  +  G   R+HECSICHKSFPTGQALGG
Sbjct: 105 GGHKASHRKLAGGEDQSTSFATTNSATVTTTTASGGGG--RSHECSICHKSFPTGQALGG 162

Query: 176 HKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFDLN 235
           HKRCHYEG I  N+ +   +NN +N+ S+   S ++ VG++         S S R FDLN
Sbjct: 163 HKRCHYEGSIGGNSIH--HHNNTTNSGSNGGMSMTSEVGSTHTV------SHSHRDFDLN 214

Query: 236 LPALPEFWS-------QEVESPLPAKKPKLLM 260
           +PALPEF S        EVESP PAKKP++LM
Sbjct: 215 IPALPEFRSNFFISGDDEVESPHPAKKPRILM 246

Source: Datisca glomerata

Species: Datisca glomerata

Genus: Datisca

Family: Datiscaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|33771374|gb|AAQ54303.1| zinc finger protein PIF1 [Nicotiana benthamiana]

 Score =  214 bits (544), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/275 (50%), Positives = 158/275 (57%), Gaps = 50/275 (18%)

Query: 1   MALEALNSPTT------NTHNHHPFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEEY 54
           MALEALNSPTT         N+ P RY ++WTK +RSKRPR+ E          PTEEEY
Sbjct: 1   MALEALNSPTTTTPPTFQFENNGPLRYLENWTKGKRSKRPRSMER--------QPTEEEY 52

Query: 55  MALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQA 114
           +ALCLIMLAR   +AN     R  SL P   P  +   PP  K+ YKCSVC K F SYQA
Sbjct: 53  LALCLIMLARSDGSAN-----REQSLPPPPVPVMKIHAPPEEKMVYKCSVCGKGFGSYQA 107

Query: 115 LGGHKASHRKNAADASASPN----AAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG 170
           LGGHKASHRK  A      +    +   +      SA  +    G+THECSICHK FPTG
Sbjct: 108 LGGHKASHRKLVAGGGGGDDQSTTSTTTNATGTTSSANGNGNGSGKTHECSICHKRFPTG 167

Query: 171 QALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSS-SQ 229
           QALGGHKRCHY+GG                 NS+   S SASVG   +T SEG GS+ S 
Sbjct: 168 QALGGHKRCHYDGG-----------------NSNGGVSVSASVG---LTSSEGVGSTVSH 207

Query: 230 RGFDLNLPALPEFW------SQEVESPLPAKKPKL 258
           R FDLN+PALPEFW        EVESP P KK +L
Sbjct: 208 RDFDLNIPALPEFWPGFGSGEDEVESPHPTKKSRL 242

Source: Nicotiana benthamiana

Species: Nicotiana benthamiana

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|171452000|dbj|BAG15864.1| zinc-finger protein [Bruguiera gymnorhiza]

 Score =  208 bits (530), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/274 (47%), Positives = 157/274 (57%), Gaps = 45/274 (16%)

Query: 1   MALEALNSPTTNTHNHH-------PFRYEDSWTKRRRSKRPRTDESPPLPPAVAAPTEEE 53
           MALEALNSP T   + H        +   +SW KR+RSKRPR D  P         TEEE
Sbjct: 1   MALEALNSPATAAPSFHFAEDSSPQYLNGESWAKRKRSKRPRVDHQP---------TEEE 51

Query: 54  YMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQ 113
           Y+ALCL+MLARGTT        R+                   KLSYKC+VCNKAF SYQ
Sbjct: 52  YLALCLVMLARGTTD------RRSSPAPAVPLAPAPPTTSSEQKLSYKCAVCNKAFPSYQ 105

Query: 114 ALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL 173
           ALGGHKASHRKNA     S ++  ++ V   P+ T S+GSG R HECSICHK FPTGQAL
Sbjct: 106 ALGGHKASHRKNAPGEEPSTSSTTSNSV---PTVTVSNGSG-RVHECSICHKVFPTGQAL 161

Query: 174 GGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSEGGGSSSQRGFD 233
           GGHKRCHY+GG       ++            +TS S  VG++         + S RGFD
Sbjct: 162 GGHKRCHYDGGAAAAAAAAAGGEKSG------LTSASEGVGSTNTL------THSHRGFD 209

Query: 234 LNLPALPEFWS-------QEVESPLPAKKPKLLM 260
           LN+PALPEF +        EV SPLPAKKP++L+
Sbjct: 210 LNIPALPEFKADFFVSGDDEVMSPLPAKKPRVLL 243

Source: Bruguiera gymnorhiza

Species: Bruguiera gymnorhiza

Genus: Bruguiera

Family: Rhizophoraceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538086|ref|XP_002510108.1| zinc finger protein, putative [Ricinus communis] gi|223550809|gb|EEF52295.1| zinc finger protein, putative [Ricinus communis]

 Score =  207 bits (528), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/288 (48%), Positives = 170/288 (59%), Gaps = 69/288 (23%)

Query: 1   MALEALNSPTTNTHNHHPFRYEDS---------WTKRRRSKRPRTDESPPLPPAVAAPTE 51
           MALEALNSPTT T     F++EDS         WTKR+RSKR    +          PTE
Sbjct: 1   MALEALNSPTTATPT---FQFEDSSSLHCLAEPWTKRKRSKRSHHHQ----------PTE 47

Query: 52  EEYMALCLIMLARGTT------TANTAPAERTPSLAPEQRP---QDQFPEPPSLKLSYKC 102
           EEY+ALCL+MLARGTT      T+ T+   R+P+ +P Q P    DQ       K  YKC
Sbjct: 48  EEYLALCLVMLARGTTSLAALSTSTTSHRHRSPTPSPPQLPSSSDDQ-------KHRYKC 100

Query: 103 SVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSI 162
           +VCNKAFSSYQALGGHKASHRK A  +     + + +  T   + TAS+   GRTHECSI
Sbjct: 101 TVCNKAFSSYQALGGHKASHRKLAGGSGGEDQSTSTT--TSTSTTTASATVSGRTHECSI 158

Query: 163 CHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVTSGSASVGASAVTFSE 222
           CHK+FP+GQALGGHKRCHYEG +             +   + VVTS          T SE
Sbjct: 159 CHKTFPSGQALGGHKRCHYEGNVGAAT---------ATEKTSVVTS----------TISE 199

Query: 223 GGGSS---SQRGFDLNLPALPEFWS-------QEVESPLPAKKPKLLM 260
           G GS+   SQRGFDLN+PALPEF +        EV SPLP KKP+L++
Sbjct: 200 GVGSTNTQSQRGFDLNIPALPEFAADFLISGDDEVMSPLPVKKPRLVL 247

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	267
TAIR|locus:2199246	227	STZ "AT1G27730" [Arabidopsis t	0.363	0.427	0.53	6.2e-43
TAIR|locus:2091201	273	ZF2 "AT3G19580" [Arabidopsis t	0.655	0.641	0.435	3.5e-38
TAIR|locus:2179964	238	ZAT6 "AT5G04340" [Arabidopsis	0.625	0.701	0.423	4.4e-36
TAIR|locus:2167766	193	ZF3 "AT5G43170" [Arabidopsis t	0.277	0.383	0.505	2.7e-34
TAIR|locus:2158192	245	ZF1 "AT5G67450" [Arabidopsis t	0.820	0.893	0.371	4.2e-31
TAIR|locus:2083053	215	AT3G49930 "AT3G49930" [Arabido	0.632	0.786	0.426	6.1e-31
TAIR|locus:2103311	288	AT3G60580 "AT3G60580" [Arabido	0.543	0.503	0.344	4.1e-21
TAIR|locus:2046153	286	AT2G28200 "AT2G28200" [Arabido	0.280	0.262	0.439	3.2e-19
TAIR|locus:2197128	917	AT1G49900 "AT1G49900" [Arabido	0.561	0.163	0.363	5.7e-18
TAIR|locus:2122118	284	DAZ2 "AT4G35280" [Arabidopsis	0.340	0.320	0.351	4.1e-16

TAIR|locus:2199246 STZ "AT1G27730" [Arabidopsis thaliana (taxid:3702)]

 Score = 270 (100.1 bits), Expect = 6.2e-43, Sum P(3) = 6.2e-43
 Identities = 53/100 (53%), Positives = 59/100 (59%)

Query:    85 RPQDQFPEPPSL-KLSYKCSVCNKAFSSYQALGGHKASHRKXXXXXXXXXXXXXXXXXXX 143
             R   Q P PP++ KLSYKCSVC+K FSSYQALGGHKASHRK                   
Sbjct:    64 RDNRQPPPPPAVEKLSYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGDDHSTSSAT 123

Query:   144 XXXXXXXXXXXXXXHECSICHKSFPTGQALGGHKRCHYEG 183
                           H C+IC+KSFP+GQALGGHKRCHYEG
Sbjct:   124 TTSAVTTGSGKS--HVCTICNKSFPSGQALGGHKRCHYEG 161

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP;RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0035264 "multicellular organism growth" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0006979 "response to oxidative stress" evidence=RCA;IMP

GO:0009644 "response to high light intensity" evidence=IEP

GO:0010117 "photoprotection" evidence=IMP

GO:0015979 "photosynthesis" evidence=IMP

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0009651 "response to salt stress" evidence=IGI;IEP

TAIR|locus:2091201 ZF2 "AT3G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 88/202 (43%), Positives = 104/202 (51%)

Query:     1 MALEALNSPT---TNTHNHHPFRYE----DSWTKRRRSKRPRT------DESPPL--PPA 45
             MALEA+N+PT   T          +    + W KR+RSKR R+        SPP   P +
Sbjct:     1 MALEAMNTPTSSFTRIETKEDLMNDAVFIEPWLKRKRSKRQRSHSPSSSSSSPPRSRPKS 60

Query:    46 VAAP-TEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSV 104
                  TEEEY+ALCL+MLA+   +  T   +++ SL P        P P S  L YKC+V
Sbjct:    61 QNQDLTEEEYLALCLLMLAKDQPS-QTRFHQQSQSLTP--------P-PESKNLPYKCNV 110

Query:   105 CNKAFSSYQALGGHKASHR-KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSIC 163
             C KAF SYQALGGHKASHR K                                 HECSIC
Sbjct:   111 CEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKIHECSIC 170

Query:   164 HKSFPTGQALGGHKRCHYEGGI 185
             HK FPTGQALGGHKRCHYEG +
Sbjct:   171 HKVFPTGQALGGHKRCHYEGNL 192

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009414 "response to water deprivation" evidence=IEP;RCA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP;RCA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2179964 ZAT6 "AT5G04340" [Arabidopsis thaliana (taxid:3702)]

 Score = 310 (114.2 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
 Identities = 80/189 (42%), Positives = 95/189 (50%)

Query:     1 MALEALNSPTTNTHNHHPFRYEDS-----WTKRRRSKRPRTDESPPLPPAVAAPTEEEYM 55
             MALE L SP  ++    P  ++DS      +K +RSKR R++          + TE+EY+
Sbjct:     1 MALETLTSPRLSSPM--PTLFQDSALGFHGSKGKRSKRSRSEFDRQ------SLTEDEYI 52

Query:    56 ALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQAL 115
             ALCL++LAR            + S  P   P    P P      YKCSVC+KAFSSYQAL
Sbjct:    53 ALCLMLLARDGDRNRDLDLPSSSSSPPLLPP---LPTP-----IYKCSVCDKAFSSYQAL 104

Query:   116 GGHKASHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XHECSICHKSFPTGQALG 174
             GGHKASHRK                                  H CSICHKSF TGQALG
Sbjct:   105 GGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALG 164

Query:   175 GHKRCHYEG 183
             GHKRCHYEG
Sbjct:   165 GHKRCHYEG 173

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0055062 "phosphate ion homeostasis" evidence=IGI

GO:2000280 "regulation of root development" evidence=IGI

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2167766 ZF3 "AT5G43170" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 2.7e-34, Sum P(3) = 2.7e-34
 Identities = 45/89 (50%), Positives = 48/89 (53%)

Query:    97 KLSYKCSVCNKAFSSYQALGGHKASHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 156
             K SYKC VC K FSSYQALGGHKASHR                                 
Sbjct:    72 KPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKS-------------- 117

Query:   157 XHECSICHKSFPTGQALGGHKRCHYEGGI 185
              H CS+C KSF TGQALGGHKRCHY+GG+
Sbjct:   118 -HVCSVCGKSFATGQALGGHKRCHYDGGV 145

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2158192 ZF1 "AT5G67450" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 95/256 (37%), Positives = 108/256 (42%)

Query:     1 MALEALNSPTTNTHNHHPFRYEDS--------WTKRRRSKRPRTDESPPLPPAVA-APTE 51
             MALE LNSPT  T      RY +         W KR+R+KR R D            P+E
Sbjct:     1 MALETLNSPTATTTARPLLRYREEMEPENLEQWAKRKRTKRQRFDHGHQNQETNKNLPSE 60

Query:    52 EEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSS 111
             EEY+ALCL+MLARG+    + P    PS A    P D           YKC+VC K+FSS
Sbjct:    61 EEYLALCLLMLARGSAV-QSPPLPPLPSRAS---PSDH--------RDYKCTVCGKSFSS 108

Query:   112 YQALGGHKASHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------HECSI 162
             YQALGGHK SHRK                                          H CSI
Sbjct:   109 YQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSI 168

Query:   163 CHKSFPTGQALGGHKRCHYEGGIXXXXXXXXXXXXXXXXXXDXXXXXXXXXXXXXXXFSE 222
             C KSF +GQALGGHKRCHY+GG                   D               +SE
Sbjct:   169 CFKSFASGQALGGHKRCHYDGGNNGNGNGSSSNSVELVAGSDVSDVDNER-------WSE 221

Query:   223 GGGSSSQRGFDLNLPA 238
                    RGFDLNLPA
Sbjct:   222 ESAIGGHRGFDLNLPA 237

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=ISS

GO:0009409 "response to cold" evidence=IEP

GO:0042538 "hyperosmotic salinity response" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2083053 AT3G49930 "AT3G49930" [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 81/190 (42%), Positives = 99/190 (52%)

Query:     1 MALEALNSPT--TNTHNHHPFR--YEDSWTKRRRS--KRPRTDESPPLPPAVAAPTEEEY 54
             MAL+ LNSPT  T T    PF    +++  +   S  KR RT       P    P+EEEY
Sbjct:     1 MALDTLNSPTSTTTTTAPPPFLRCLDETEPENLESWTKRKRTKRHRIDQPN-PPPSEEEY 59

Query:    55 MALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQA 114
             +ALCL+MLARG++  ++ P++   SL+P    Q            YKCSVC K+F SYQA
Sbjct:    60 LALCLLMLARGSSDHHSPPSDHH-SLSPLSDHQKD----------YKCSVCGKSFPSYQA 108

Query:   115 LGGHKASHRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHECSICHKSFPTGQALG 174
             LGGHK SHRK                                 H CSIC KSFP+GQALG
Sbjct:   109 LGGHKTSHRKPVSVDVNNSNGTVTNNGNISNGLVGQSGKT---HNCSICFKSFPSGQALG 165

Query:   175 GHKRCHYEGG 184
             GHKRCHY+GG
Sbjct:   166 GHKRCHYDGG 175

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

TAIR|locus:2103311 AT3G60580 "AT3G60580" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 53/154 (34%), Positives = 70/154 (45%)

Query:    33 RPRTDESPPLPPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFP- 91
             +P +D+ PP   A    TEE+ +A CL+ML+R     N +  E    +  E+  +     
Sbjct:   106 KPESDQEPPHSSASDTTTEED-LAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKI 164

Query:    92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKXXXXXXXXXXXXXXXXXXXXXXXXXXX 151
                + K  YKC  C K F SYQALGGH+ASH+K                           
Sbjct:   165 NRATTKGRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRI- 223

Query:   152 XXXXXXHECSICHKSFPTGQALGGHKRCHYEGGI 185
                   HEC IC + F +GQALGGHKR H  G +
Sbjct:   224 ------HECPICLRVFASGQALGGHKRSHGVGNL 251

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2046153 AT2G28200 "AT2G28200" [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 3.2e-19, Sum P(2) = 3.2e-19
 Identities = 36/82 (43%), Positives = 46/82 (56%)

Query:    43 PPAVAAPTEEEYMALCLIMLARGTTTANTAPAERTPSLAPEQRPQDQFPEPPSLKLSYKC 102
             P       EEE MA+CLIMLARGT      P+   P L   ++   +     S    Y+C
Sbjct:    65 PVTTDCTQEEEDMAICLIMLARGTVL----PS---PDLKNSRKIHQKISSENSSFYVYEC 117

Query:   103 SVCNKAFSSYQALGGHKASHRK 124
               CN+ FSS+QALGGH+ASH+K
Sbjct:   118 KTCNRTFSSFQALGGHRASHKK 139

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0048573 "photoperiodism, flowering" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

TAIR|locus:2197128 AT1G49900 "AT1G49900" [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 5.7e-18, P = 5.7e-18
 Identities = 61/168 (36%), Positives = 74/168 (44%)

Query:    25 WTKRRRSKRPRTDESPPLPPAVAAPTEEEYMALCLIMLA----RGTTTANTAPAERTPSL 80
             W    R KR R  +    P + ++P+E +  AL L+  +       T   T P  +T   
Sbjct:   112 WLDSFRLKRQRLGDDED-PSSSSSPSEVDIAALTLLQFSCDRRHPQTQTLTRPQPQTHK- 169

Query:    81 APEQRPQDQFPE-----PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKXXXXXXXXXXX 135
                QRP  Q        PP   L +KCS+C K F+SYQALGGHKASH             
Sbjct:   170 TQLQRPPPQLQSQTQTAPPKSDL-FKCSICEKVFTSYQALGGHKASH------SIKAAQL 222

Query:   136 XXXXXXXXXXXXXXXXXXXXXXHECSICHKSFPTGQALGGHKRCHYEG 183
                                   H+C ICH  FPTGQALGGHKR HYEG
Sbjct:   223 ENAGADAGEKTRSKMLSPSGKIHKCDICHVLFPTGQALGGHKRRHYEG 270

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2122118 DAZ2 "AT4G35280" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
 Identities = 33/94 (35%), Positives = 45/94 (47%)

Query:    91 PEPPSLKLSYKCSVCNKAFSSYQALGGHKASHR--KXXXXXXXXXXXXXXXXXXXXXXXX 148
             P   S++  ++C  C K F S+QALGGH+ASH+  K                        
Sbjct:   154 PSSSSIE-RFECGGCKKVFGSHQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQ 212

Query:   149 XXXXXXXXXHECSICHKSFPTGQALGGHKRCHYE 182
                      H+C+IC + F +GQALGGH RCH+E
Sbjct:   213 GKILTFSGHHKCNICFRVFSSGQALGGHMRCHWE 246

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

GO:0030036 "actin cytoskeleton organization" evidence=RCA

GO:0030048 "actin filament-based movement" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	267
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-08
pfam13912	27	pfam13912, zf-C2H2_6, C2H2-type zinc finger	2e-08

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 48.8 bits (117), Expect = 2e-08
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 157 THECSICHKSFPTGQALGGHKRCHYEG 183
            H C +C K+F + QALGGHK+ H   
Sbjct: 1   VHTCGVCGKTFSSLQALGGHKKSHCSL 27

Length = 27

>gnl|CDD|206083 pfam13912, zf-C2H2_6, C2H2-type zinc finger

 Score = 48.4 bits (116), Expect = 2e-08
 Identities = 16/25 (64%), Positives = 17/25 (68%)

Query: 100 YKCSVCNKAFSSYQALGGHKASHRK 124
           + C VC K FSS QALGGHK SH  
Sbjct: 2   HTCGVCGKTFSSLQALGGHKKSHCS 26

Length = 27

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	267
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.85
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.71
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.57
KOG3576	267	consensus Ovo and related transcription factors [T	99.55
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.47
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.32
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.99
KOG3576	267	consensus Ovo and related transcription factors [T	98.93
PHA02768	55	hypothetical protein; Provisional	98.92
PHA00733	128	hypothetical protein	98.84
KOG3608	467	consensus Zn finger proteins [General function pre	98.74
PLN03086	567	PRLI-interacting factor K; Provisional	98.63
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.54
KOG3608	467	consensus Zn finger proteins [General function pre	98.46
KOG3993	500	consensus Transcription factor (contains Zn finger	98.43
PHA02768	55	hypothetical protein; Provisional	98.28
PHA00732	79	hypothetical protein	98.28
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.15
PLN03086	567	PRLI-interacting factor K; Provisional	98.01
PHA00616	44	hypothetical protein	97.94
PHA00733	128	hypothetical protein	97.94
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.89
PHA00616	44	hypothetical protein	97.89
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.88
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.63
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.61
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.51
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.51
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.49
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.46
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.45
smart00355	26	ZnF_C2H2 zinc finger.	97.0
KOG3993	500	consensus Transcription factor (contains Zn finger	96.98
smart00355	26	ZnF_C2H2 zinc finger.	96.88
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.84
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.65
PHA00732	79	hypothetical protein	96.27
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.26
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.09
PRK04860	160	hypothetical protein; Provisional	96.02
KOG1146	1406	consensus Homeobox protein [General function predi	95.83
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.76
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.7
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.58
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.0
KOG2893	341	consensus Zn finger protein [General function pred	94.57
COG5048	467	FOG: Zn-finger [General function prediction only]	94.37
KOG1146	1406	consensus Homeobox protein [General function predi	93.81
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.69
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.28
COG5048	467	FOG: Zn-finger [General function prediction only]	92.0
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.97
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.91
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.66
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	90.37
COG5189	423	SFP1 Putative transcriptional repressor regulating	90.35
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.28
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	88.5
PRK04860	160	hypothetical protein; Provisional	88.05
KOG4124	442	consensus Putative transcriptional repressor regul	84.42
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.74
COG4049	65	Uncharacterized protein containing archaeal-type C	83.55
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	80.81

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.85  E-value=2.2e-22  Score=171.65  Aligned_cols=107  Identities=21%  Similarity=0.279  Sum_probs=98.1

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHH
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALG  174 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~  174 (267)
                      ..+.|.|++|+|+|.+..+|+.|+++|+  .+ .|.+|||.|.+.+   .|+-|+|+|+|||||.|..|+|.|..+++|+
T Consensus       158 s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPW---LLQGHiRTHTGEKPF~C~hC~kAFADRSNLR  232 (279)
T KOG2462|consen  158 SKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPW---LLQGHIRTHTGEKPFSCPHCGKAFADRSNLR  232 (279)
T ss_pred             ccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchH---HhhcccccccCCCCccCCcccchhcchHHHH
Confidence            4777999999999999999999999997  34 8999999999999   9999999999999999999999999999999


Q ss_pred             hhhhhcccCcCCCCCCCCCCCCCCCCCCCCccc
Q 024499          175 GHKRCHYEGGINNNNNNSSSNNNKSNNNSDVVT  207 (267)
Q Consensus       175 ~H~r~H~~~~~~~~~~~~ss~~~~~~~~~~~~~  207 (267)
                      .||++|.+.+.+.|..|..++...+.++-....
T Consensus       233 AHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  233 AHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             HHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999999999999999999988877665554443

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.71  E-value=1.1e-18  Score=148.97  Aligned_cols=82  Identities=28%  Similarity=0.437  Sum_probs=78.3

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhH
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL  173 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L  173 (267)
                      +..-+++|.+|||.|.+..-|++|+|+|+|||| .|..|++.|...+   +|+.||.+|.+.|.|+|..|+|.|..++.|
T Consensus       183 TH~l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRS---NLRAHmQTHS~~K~~qC~~C~KsFsl~SyL  259 (279)
T KOG2462|consen  183 THTLPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRS---NLRAHMQTHSDVKKHQCPRCGKSFALKSYL  259 (279)
T ss_pred             ccCCCcccccccccccchHHhhcccccccCCCCccCCcccchhcchH---HHHHHHHhhcCCccccCcchhhHHHHHHHH
Confidence            455789999999999999999999999999999 9999999999999   999999999999999999999999999999


Q ss_pred             Hhhhhh
Q 024499          174 GGHKRC  179 (267)
Q Consensus       174 ~~H~r~  179 (267)
                      .+|...
T Consensus       260 nKH~ES  265 (279)
T KOG2462|consen  260 NKHSES  265 (279)
T ss_pred             HHhhhh
Confidence            999764

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.57  E-value=3.5e-16  Score=147.79  Aligned_cols=84  Identities=21%  Similarity=0.368  Sum_probs=79.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      .....+..|.|+.|+|+|...+.|.+|+--|+|.++ .|.+|.|.|..+.   +|..|+|.|.|+|||+|+.|+|.|...
T Consensus       887 ~~kte~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKH---HLtEHkRLHSGEKPfQCdKClKRFSHS  963 (1007)
T KOG3623|consen  887 HAKTEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKH---HLTEHKRLHSGEKPFQCDKCLKRFSHS  963 (1007)
T ss_pred             cccCccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhh---hhhhhhhhccCCCcchhhhhhhhcccc
Confidence            334567889999999999999999999999999999 9999999999999   999999999999999999999999999


Q ss_pred             hhHHhhhh
Q 024499          171 QALGGHKR  178 (267)
Q Consensus       171 ~~L~~H~r  178 (267)
                      ....+||-
T Consensus       964 GSYSQHMN  971 (1007)
T KOG3623|consen  964 GSYSQHMN  971 (1007)
T ss_pred             cchHhhhc
Confidence            99999996

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.55  E-value=6.3e-16  Score=126.50  Aligned_cols=84  Identities=24%  Similarity=0.382  Sum_probs=78.3

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      ..+...|.|.+|+|.|....-|.+|++-|...+. .|..||+.|....   .|++|+++|+|.+||+|..|+|.|+++..
T Consensus       112 ssd~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtf---dlkrh~rthtgvrpykc~~c~kaftqrcs  188 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTF---DLKRHTRTHTGVRPYKCSLCEKAFTQRCS  188 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchh---hhhhhhccccCccccchhhhhHHHHhhcc
Confidence            3456779999999999999999999999998877 9999999999999   99999999999999999999999999999


Q ss_pred             HHhhhh-hc
Q 024499          173 LGGHKR-CH  180 (267)
Q Consensus       173 L~~H~r-~H  180 (267)
                      |..|.+ +|
T Consensus       189 leshl~kvh  197 (267)
T KOG3576|consen  189 LESHLKKVH  197 (267)
T ss_pred             HHHHHHHHc
Confidence            999987 45

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.47  E-value=6.8e-15  Score=141.15  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=38.4

Q ss_pred             CcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcC
Q 024499          144 PPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGI  185 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~  185 (267)
                      .|+.|.++|+|||||+|.|||+.|+++.+|+.||-+|....+
T Consensus       620 aLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~  661 (958)
T KOG1074|consen  620 ALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPP  661 (958)
T ss_pred             hhhhhhhcccCcCccccccccchhccccchhhcccccccCcc
Confidence            678899999999999999999999999999999999976543

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.32  E-value=7.7e-13  Score=125.46  Aligned_cols=47  Identities=19%  Similarity=0.306  Sum_probs=23.4

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhh
Q 024499          128 DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHK  177 (267)
Q Consensus       128 ~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~  177 (267)
                      .|..|+|.|..+.   +|+.|+|||.|+|||+|+.|+|.|.....+..||
T Consensus       283 KCtECgKAFKfKH---HLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHm  329 (1007)
T KOG3623|consen  283 KCTECGKAFKFKH---HLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHM  329 (1007)
T ss_pred             cccccchhhhhHH---HHHhhheeecCCCCcCCcccccccccCCcccccc
Confidence            3444555555444   5555555555555555555555555444444444

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.99  E-value=2.1e-10  Score=110.78  Aligned_cols=87  Identities=24%  Similarity=0.362  Sum_probs=79.3

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCC----CceeCc---cccccCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGG----RTHECS---ICHKSFP  168 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~----kp~~C~---~C~k~F~  168 (267)
                      --|-+|-+|-++...+.+|+.|.|+|+++++ .|.+|++.|..+.   +|+.|+.+|...    -.|.|+   +|.+.|.
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkG---NLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKG---NLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhcccc---chhhcccccccCccccccccCCchhhhccccc
Confidence            3478999999999999999999999999999 9999999999999   999999999754    358999   9999999


Q ss_pred             ChhhHHhhhhhcccCcCC
Q 024499          169 TGQALGGHKRCHYEGGIN  186 (267)
Q Consensus       169 ~~~~L~~H~r~H~~~~~~  186 (267)
                      ..-.|.+|+|+|.++...
T Consensus       680 n~V~lpQhIriH~~~~~s  697 (958)
T KOG1074|consen  680 NAVTLPQHIRIHLGGQIS  697 (958)
T ss_pred             ccccccceEEeecCCCCC
Confidence            999999999999965433

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.93  E-value=1.2e-10  Score=95.76  Aligned_cols=87  Identities=16%  Similarity=0.130  Sum_probs=76.6

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccc-cCC----------CCCceeCc
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATAS-SGS----------GGRTHECS  161 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~-~h~----------g~kp~~C~  161 (267)
                      ++..+.|.|..|||.|..-..|++|+|+|++.++ .|..|++.|.+..   .|..|.+ +|.          ..|.|.|.
T Consensus       140 h~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrc---sleshl~kvhgv~~~yaykerr~kl~vce  216 (267)
T KOG3576|consen  140 HSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRC---SLESHLKKVHGVQHQYAYKERRAKLYVCE  216 (267)
T ss_pred             ccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhc---cHHHHHHHHcCchHHHHHHHhhhheeeec
Confidence            4566789999999999999999999999999999 9999999999999   9988864 443          25789999


Q ss_pred             cccccCCChhhHHhhhhhcccC
Q 024499          162 ICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       162 ~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      .||.+-.+...+..|++.|+..
T Consensus       217 dcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  217 DCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             ccCCCCCChhHHHHHHHhcCCC
Confidence            9999999999999999988754

>PHA02768 hypothetical protein; Provisional

Probab=98.92  E-value=4.7e-10  Score=73.69  Aligned_cols=43  Identities=16%  Similarity=0.358  Sum_probs=37.0

Q ss_pred             eeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHH
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALG  174 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~  174 (267)
                      |+|+.|||.|.+.++|..|+++|+                                ++|+|..|++.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--------------------------------k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--------------------------------TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--------------------------------CcccCCcccceecccceeE
Confidence            899999999999999999999983                                5778888888888777664

>PHA00733 hypothetical protein

Probab=98.84  E-value=8.4e-10  Score=86.45  Aligned_cols=82  Identities=11%  Similarity=0.041  Sum_probs=68.5

Q ss_pred             CCcceeccccccccCChHHHHHh--HHh---hCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGH--KAS---HRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H--~~~---H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      ..+++.|.+|.+.|.....|..|  .+.   +...++ .|..|++.|....   .|..|++.|  +++|.|.+|++.|..
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s---~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSV---SLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHH---HHHHHHhcC--CcCccCCCCCCccCC
Confidence            56789999999999998888776  222   223455 9999999999999   999999987  467999999999999


Q ss_pred             hhhHHhhhhhccc
Q 024499          170 GQALGGHKRCHYE  182 (267)
Q Consensus       170 ~~~L~~H~r~H~~  182 (267)
                      ...|..|++..++
T Consensus       112 ~~sL~~H~~~~h~  124 (128)
T PHA00733        112 TDSTLDHVCKKHN  124 (128)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999986654

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.74  E-value=2.1e-09  Score=95.01  Aligned_cols=87  Identities=16%  Similarity=0.291  Sum_probs=69.8

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCccccccc-CCCCCceeCccccccCCChhhHHh
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASS-GSGGRTHECSICHKSFPTGQALGG  175 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~-h~g~kp~~C~~C~k~F~~~~~L~~  175 (267)
                      ..+|+|..|.|.|.....|..|++.|..- -.|+.|+.......   .|.+|++. |...|||+|+.|.+.|.+.+.|.+
T Consensus       235 ~n~fqC~~C~KrFaTeklL~~Hv~rHvn~-ykCplCdmtc~~~s---sL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~k  310 (467)
T KOG3608|consen  235 TNSFQCAQCFKRFATEKLLKSHVVRHVNC-YKCPLCDMTCSSAS---SLTTHIRYRHSKDKPFKCDECDTRCVRESDLAK  310 (467)
T ss_pred             CCchHHHHHHHHHhHHHHHHHHHHHhhhc-ccccccccCCCChH---HHHHHHHhhhccCCCccccchhhhhccHHHHHH
Confidence            44688888888888888888888877432 26788888888777   89999875 888999999999999999999999


Q ss_pred             hhhhcccCcCCCC
Q 024499          176 HKRCHYEGGINNN  188 (267)
Q Consensus       176 H~r~H~~~~~~~~  188 (267)
                      |..+|. +..|.|
T Consensus       311 H~~~HS-~~~y~C  322 (467)
T KOG3608|consen  311 HVQVHS-KTVYQC  322 (467)
T ss_pred             HHHhcc-ccceec
Confidence            988886 555544

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.63  E-value=3e-08  Score=94.55  Aligned_cols=91  Identities=13%  Similarity=0.183  Sum_probs=74.9

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC-----
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT-----  169 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~-----  169 (267)
                      .++.+.|+.|++.|. ...|..|+..|+  ++ .|. |++.+ ...   .|..|+.+|...|++.|.+|++.|..     
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~---~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~  521 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKE---QMVQHQASTCPLRLITCRFCGDMVQAGGSAM  521 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chh---HHHhhhhccCCCCceeCCCCCCccccCcccc
Confidence            456689999999996 688999999985  44 787 99755 446   89999999999999999999999963     


Q ss_pred             -----hhhHHhhhhhcccCcCCCCCCCCCCC
Q 024499          170 -----GQALGGHKRCHYEGGINNNNNNSSSN  195 (267)
Q Consensus       170 -----~~~L~~H~r~H~~~~~~~~~~~~ss~  195 (267)
                           ...|..|..++ +.+...|..|+...
T Consensus       522 d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~V  551 (567)
T PLN03086        522 DVRDRLRGMSEHESIC-GSRTAPCDSCGRSV  551 (567)
T ss_pred             chhhhhhhHHHHHHhc-CCcceEccccCCee
Confidence                 34899999986 88888888776543

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.54  E-value=6.2e-09  Score=58.46  Aligned_cols=25  Identities=24%  Similarity=0.527  Sum_probs=21.3

Q ss_pred             cccccccCCCCCceeCccccccCCC
Q 024499          145 PSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus       145 L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      |.+|+++|+|+|||+|++|++.|.+
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5667777799999999999999964

...

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=98.46  E-value=4.2e-08  Score=86.93  Aligned_cols=87  Identities=17%  Similarity=0.257  Sum_probs=71.2

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCC--CCCCCCCCCCCCCcccccccCC-CC--CceeCccccccC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASA--SPNAAAASDVTPPPSATASSGS-GG--RTHECSICHKSF  167 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~--C~~~f~~~~~~~~L~~H~~~h~-g~--kp~~C~~C~k~F  167 (267)
                      .++..+||+|+.|++.|.+...|..|...|.+....|..  |...|...-   .+++|++-+. |.  -+|.|..|.+.|
T Consensus       286 rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~---q~~~H~~evhEg~np~~Y~CH~Cdr~f  362 (467)
T KOG3608|consen  286 RHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYT---QMRRHFLEVHEGNNPILYACHCCDRFF  362 (467)
T ss_pred             hhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHH---HHHHHHHHhccCCCCCceeeecchhhh
Confidence            356789999999999999999999999999855557765  888887777   7888877644 43  469999999999


Q ss_pred             CChhhHHhhhhhccc
Q 024499          168 PTGQALGGHKRCHYE  182 (267)
Q Consensus       168 ~~~~~L~~H~r~H~~  182 (267)
                      +++.+|..|++.-++
T Consensus       363 t~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  363 TSGKSLSAHLMKKHG  377 (467)
T ss_pred             ccchhHHHHHHHhhc
Confidence            999999999865443

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.43  E-value=1.6e-07  Score=85.03  Aligned_cols=27  Identities=26%  Similarity=0.470  Sum_probs=24.7

Q ss_pred             ceeCccccccCCChhhHHhhhhhcccC
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      .|.|.+|+|.|.+...|++|+.+|...
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~~  382 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQRA  382 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhcc
Confidence            699999999999999999999888754

>PHA02768 hypothetical protein; Provisional

Probab=98.28  E-value=4.6e-07  Score=59.62  Aligned_cols=37  Identities=22%  Similarity=0.275  Sum_probs=29.5

Q ss_pred             ceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCC
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSN  195 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~  195 (267)
                      -|+|++||+.|.+.++|..|+|+|+  +.+.+..|...+
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f   41 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRIS   41 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCccccee
Confidence            4899999999999999999999999  344454444433

>PHA00732 hypothetical protein

Probab=98.28  E-value=5.1e-07  Score=64.61  Aligned_cols=37  Identities=19%  Similarity=0.361  Sum_probs=27.5

Q ss_pred             ceeccccccccCChHHHHHhHHh-hCCCCCCCCCCCCCCC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS-HRKNAADASASPNAAA  137 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~c~~C~~~f~  137 (267)
                      ||.|..|++.|.+...|..|++. |.+.  .|..|++.|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~~--~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTLT--KCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCCC--ccCCCCCEeC
Confidence            58999999999999999999984 5321  3445555444

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.15  E-value=1.1e-06  Score=76.99  Aligned_cols=68  Identities=24%  Similarity=0.468  Sum_probs=50.4

Q ss_pred             CCcceeccc--cccccCChHHHHHhHHh-hCCCCC---CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC
Q 024499           96 LKLSYKCSV--CNKAFSSYQALGGHKAS-HRKNAA---DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        96 g~~p~~C~~--C~k~F~~~~~L~~H~~~-H~~~k~---~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      ++|||+|++  |.|.|+..-.|+.|+.- |...+.   ..++-...|               -...|||+|.+|+|.|+.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F---------------~~~~KPYrCevC~KRYKN  410 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF---------------SAKDKPYRCEVCDKRYKN  410 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc---------------cccCCceeccccchhhcc
Confidence            459999987  99999999999999873 533322   111112222               245699999999999999


Q ss_pred             hhhHHhhhh
Q 024499          170 GQALGGHKR  178 (267)
Q Consensus       170 ~~~L~~H~r  178 (267)
                      ...|+-|+.
T Consensus       411 lNGLKYHr~  419 (423)
T COG5189         411 LNGLKYHRK  419 (423)
T ss_pred             Cccceeccc
Confidence            999988854

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.01  E-value=3.7e-06  Score=80.41  Aligned_cols=77  Identities=19%  Similarity=0.249  Sum_probs=62.4

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCC-------CCCCcccccccCCCCCceeCccccccCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASD-------VTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~-------~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      ++|.|. |++.| .+..|..|+.+|...++ .|..|++.|....       ....|..|+..+ |.+++.|..||+.|..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence            789999 99866 66899999999999988 9999999985321       011678898886 9999999999999977


Q ss_pred             hhhHHhhhh
Q 024499          170 GQALGGHKR  178 (267)
Q Consensus       170 ~~~L~~H~r  178 (267)
                      +. |..|+.
T Consensus       554 rd-m~~H~~  561 (567)
T PLN03086        554 KE-MDIHQI  561 (567)
T ss_pred             hh-HHHHHH
Confidence            64 566764

>PHA00616 hypothetical protein

Probab=97.94  E-value=2.6e-06  Score=53.39  Aligned_cols=32  Identities=13%  Similarity=0.073  Sum_probs=28.8

Q ss_pred             ceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      ||+|..||+.|...+.|..|++.|+++++..+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68999999999999999999999999876654

>PHA00733 hypothetical protein

Probab=97.94  E-value=3.9e-06  Score=65.78  Aligned_cols=54  Identities=17%  Similarity=0.209  Sum_probs=46.3

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCC
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGS  153 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~  153 (267)
                      ++++|.|+.|++.|.+...|..|++.|.. ...|..|++.|....   .|..|+....
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h~~-~~~C~~CgK~F~~~~---sL~~H~~~~h  123 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYTEH-SKVCPVCGKEFRNTD---STLDHVCKKH  123 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcCCc-CccCCCCCCccCCHH---HHHHHHHHhc
Confidence            57889999999999999999999998732 239999999999988   8988876544

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=9.7e-06  Score=43.79  Aligned_cols=23  Identities=48%  Similarity=0.914  Sum_probs=21.8

Q ss_pred             eeccccccccCChHHHHHhHHhh
Q 024499          100 YKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      |+|.+|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            79999999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00616 hypothetical protein

Probab=97.89  E-value=5.9e-06  Score=51.82  Aligned_cols=29  Identities=24%  Similarity=0.401  Sum_probs=25.8

Q ss_pred             ceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ||+|..||+.|..++.|..|++.|+++++
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~   29 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNK   29 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCc
Confidence            69999999999999999999999965544

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.88  E-value=4.7e-06  Score=45.07  Aligned_cols=23  Identities=43%  Similarity=0.769  Sum_probs=21.9

Q ss_pred             eeCccccccCCChhhHHhhhhhc
Q 024499          158 HECSICHKSFPTGQALGGHKRCH  180 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H  180 (267)
                      |+|.+|++.|.+...|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999986

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.63  E-value=4.1e-05  Score=42.98  Aligned_cols=25  Identities=48%  Similarity=0.844  Sum_probs=23.5

Q ss_pred             ceeccccccccCChHHHHHhHHhhC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      +|+|.+|++.|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5999999999999999999999884

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.61  E-value=2.5e-05  Score=43.90  Aligned_cols=26  Identities=42%  Similarity=0.727  Sum_probs=24.3

Q ss_pred             ceeCccccccCCChhhHHhhhhhccc
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      +|+|.+|++.|....+|..|++.|..
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            69999999999999999999999864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.51  E-value=0.00011  Score=48.56  Aligned_cols=51  Identities=29%  Similarity=0.503  Sum_probs=38.5

Q ss_pred             ceeccccccccCChHHHHHhHHh-hCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS-HRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHK  177 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~  177 (267)
                      .|.|++|++. .+...|..|... |.                             ...+.+.|++|...+.  .+|..|+
T Consensus         2 ~f~CP~C~~~-~~~~~L~~H~~~~H~-----------------------------~~~~~v~CPiC~~~~~--~~l~~Hl   49 (54)
T PF05605_consen    2 SFTCPYCGKG-FSESSLVEHCEDEHR-----------------------------SESKNVVCPICSSRVT--DNLIRHL   49 (54)
T ss_pred             CcCCCCCCCc-cCHHHHHHHHHhHCc-----------------------------CCCCCccCCCchhhhh--hHHHHHH
Confidence            3899999995 556889999764 52                             1235689999998755  4899999


Q ss_pred             hhcc
Q 024499          178 RCHY  181 (267)
Q Consensus       178 r~H~  181 (267)
                      ..++
T Consensus        50 ~~~H   53 (54)
T PF05605_consen   50 NSQH   53 (54)
T ss_pred             HHhc
Confidence            8765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.51  E-value=4.7e-05  Score=41.07  Aligned_cols=24  Identities=42%  Similarity=0.754  Sum_probs=20.4

Q ss_pred             eeCccccccCCChhhHHhhhhhcc
Q 024499          158 HECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      |.|++|++.|.+...|..|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            789999999999999999999874

...

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.49  E-value=4.1e-05  Score=42.77  Aligned_cols=24  Identities=13%  Similarity=0.156  Sum_probs=16.6

Q ss_pred             HHHHhHHhhCCCCC-CCCCCCCCCC
Q 024499          114 ALGGHKASHRKNAA-DASASPNAAA  137 (267)
Q Consensus       114 ~L~~H~~~H~~~k~-~c~~C~~~f~  137 (267)
                      +|..|+++|+++++ .|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            46677777777777 7777776664

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.46  E-value=5.6e-05  Score=55.78  Aligned_cols=72  Identities=22%  Similarity=0.369  Sum_probs=21.9

Q ss_pred             eccccccccCChHHHHHhHHhhCCC-CCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhh
Q 024499          101 KCSVCNKAFSSYQALGGHKASHRKN-AADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       101 ~C~~C~k~F~~~~~L~~H~~~H~~~-k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      +|..|+..|.....|..|+....+. .+.....    ....   .+..+.+.. -...+.|.+|++.|.....|..|++.
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l----~~~~---~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQKYL----VDPN---RLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             --------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             Ccccccccccccccccccccccccccccccccc----cccc---ccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            5999999999999999999754332 2111000    0111   222222211 12369999999999999999999996


Q ss_pred             c
Q 024499          180 H  180 (267)
Q Consensus       180 H  180 (267)
                      +
T Consensus        73 ~   73 (100)
T PF12756_consen   73 K   73 (100)
T ss_dssp             T
T ss_pred             c
Confidence            5

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.45  E-value=0.00012  Score=39.45  Aligned_cols=23  Identities=35%  Similarity=0.846  Sum_probs=20.0

Q ss_pred             eeccccccccCChHHHHHhHHhh
Q 024499          100 YKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      |.|++|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999886

...

>smart00355 ZnF_C2H2 zinc finger

Probab=97.00  E-value=0.00039  Score=37.84  Aligned_cols=25  Identities=36%  Similarity=0.622  Sum_probs=22.7

Q ss_pred             eeCccccccCCChhhHHhhhhhccc
Q 024499          158 HECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |+|..|++.|.....|..|++.|..
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~~   25 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHXX   25 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhcc
Confidence            6899999999999999999998753

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=96.98  E-value=0.00066  Score=62.03  Aligned_cols=84  Identities=21%  Similarity=0.400  Sum_probs=54.3

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC------------------CCCCCCCCCC-------------------
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA------------------DASASPNAAA-------------------  137 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~------------------~c~~C~~~f~-------------------  137 (267)
                      +.+..|.|.+|+|.|.++..|+.|+.+|.....                  .|..|.-.+.                   
T Consensus       352 ss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~  431 (500)
T KOG3993|consen  352 SSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELE  431 (500)
T ss_pred             ccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecccccc
Confidence            345589999999999999999999998863111                  1222222222                   


Q ss_pred             ----------CCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhh-hcc
Q 024499          138 ----------ASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKR-CHY  181 (267)
Q Consensus       138 ----------~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r-~H~  181 (267)
                                .+.   .-..|.+....+..|.|.+|--.|.....|.+|.. .|.
T Consensus       432 ~pp~~~~ppsss~---~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  432 LPPYDGSPPSSSG---SSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             CCCCCCCCcccCC---CCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence                      111   22223333334566888889888888888888875 343

>smart00355 ZnF_C2H2 zinc finger

Probab=96.88  E-value=0.00065  Score=36.94  Aligned_cols=24  Identities=42%  Similarity=0.816  Sum_probs=22.2

Q ss_pred             eeccccccccCChHHHHHhHHhhC
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |+|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999999874

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.84  E-value=0.00076  Score=43.39  Aligned_cols=34  Identities=15%  Similarity=0.219  Sum_probs=24.2

Q ss_pred             CCCCceeCccccccCCChhhHHhhhhhcccCcCC
Q 024499          153 SGGRTHECSICHKSFPTGQALGGHKRCHYEGGIN  186 (267)
Q Consensus       153 ~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~  186 (267)
                      ..++|..|++|+..+.+..+|++|+.++++.+++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~~   53 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKPG   53 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS--
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccCC
Confidence            3568999999999999999999999988877653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.65  E-value=0.0015  Score=35.75  Aligned_cols=23  Identities=43%  Similarity=0.816  Sum_probs=21.6

Q ss_pred             eeccccccccCChHHHHHhHHhh
Q 024499          100 YKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      |.|.+|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999875

>PHA00732 hypothetical protein

Probab=96.27  E-value=0.0032  Score=45.01  Aligned_cols=46  Identities=17%  Similarity=0.316  Sum_probs=36.9

Q ss_pred             CCCCCCCCCCCCCCCCCccccccc-CCCCCceeCccccccCCChhhHHhhhhhccc
Q 024499          128 DASASPNAAAASDVTPPPSATASS-GSGGRTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       128 ~c~~C~~~f~~~~~~~~L~~H~~~-h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      .|..|++.|....   .|..|++. |.   ++.|++|++.|.   .|..|.+++.+
T Consensus         3 ~C~~Cgk~F~s~s---~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          3 KCPICGFTTVTLF---ALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             cCCCCCCccCCHH---HHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccCC
Confidence            5889999999888   89999884 65   368999999997   57788876654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.26  E-value=0.0019  Score=35.31  Aligned_cols=23  Identities=39%  Similarity=0.761  Sum_probs=21.3

Q ss_pred             eeCccccccCCChhhHHhhhhhc
Q 024499          158 HECSICHKSFPTGQALGGHKRCH  180 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H  180 (267)
                      |.|.+|++.|.....|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999999865

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.09  E-value=0.0098  Score=38.34  Aligned_cols=33  Identities=12%  Similarity=0.260  Sum_probs=23.0

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ..+.|-.|++|+..+.+..+|.+|+..+++.++
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            467889999999999999999999987665443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.02  E-value=0.0038  Score=50.72  Aligned_cols=41  Identities=17%  Similarity=0.480  Sum_probs=29.4

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      .-+|.|. |++   ....+.+|.++|                              +++++|.|..|++.|....
T Consensus       117 ~~~Y~C~-C~~---~~~~~rrH~ri~------------------------------~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        117 TFPYRCK-CQE---HQLTVRRHNRVV------------------------------RGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEEcC-CCC---eeCHHHHHHHHh------------------------------cCCccEECCCCCceeEEec
Confidence            3579997 887   455666676666                              5778888888888776543

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=95.83  E-value=0.0045  Score=63.94  Aligned_cols=79  Identities=24%  Similarity=0.315  Sum_probs=53.4

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHh-hCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKAS-HRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~-H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      +.-.+-|+|..|+..|...+.|..|||+ |..... .|.    .+....   .+.+-...-.+.++|.|..|...|+.+.
T Consensus       460 ~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~----~gq~~~---~~arg~~~~~~~~p~~C~~C~~stttng  532 (1406)
T KOG1146|consen  460 HSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCK----AGQNHP---RLARGEVYRCPGKPYPCRACNYSTTTNG  532 (1406)
T ss_pred             ecccccccCCccchhhhhHHHhhhcccccccccchhHhH----hccccc---cccccccccCCCCcccceeeeeeeecch
Confidence            3456889999999999999999999997 432211 111    000000   1111111123568999999999999999


Q ss_pred             hHHhhhhh
Q 024499          172 ALGGHKRC  179 (267)
Q Consensus       172 ~L~~H~r~  179 (267)
                      +|..|++.
T Consensus       533 ~LsihlqS  540 (1406)
T KOG1146|consen  533 NLSIHLQS  540 (1406)
T ss_pred             HHHHHHHH
Confidence            99999973

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.76  E-value=0.0049  Score=34.47  Aligned_cols=22  Identities=27%  Similarity=0.599  Sum_probs=20.6

Q ss_pred             eeCccccccCCChhhHHhhhhh
Q 024499          158 HECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      |.|.+|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999975

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.70  E-value=0.0046  Score=34.57  Aligned_cols=23  Identities=39%  Similarity=0.694  Sum_probs=21.1

Q ss_pred             eeccccccccCChHHHHHhHHhh
Q 024499          100 YKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      |.|..|++.|.....|..|++++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~sk   24 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKSK   24 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTSH
T ss_pred             CCcccCCCCcCCHHHHHHHHccC
Confidence            78999999999999999998763

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.58  E-value=0.0062  Score=32.96  Aligned_cols=24  Identities=25%  Similarity=0.372  Sum_probs=19.3

Q ss_pred             eeCccccccCCChhhHHhhhhhccc
Q 024499          158 HECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |+|..|..... ...|..|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            78999999888 8999999998753

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.00  E-value=0.021  Score=30.82  Aligned_cols=23  Identities=35%  Similarity=0.608  Sum_probs=18.7

Q ss_pred             eeccccccccCChHHHHHhHHhhC
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |+|..|+.... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            79999999998 999999998863

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=94.57  E-value=0.013  Score=50.05  Aligned_cols=45  Identities=33%  Similarity=0.711  Sum_probs=29.0

Q ss_pred             ccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhh-hhhc
Q 024499          102 CSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGH-KRCH  180 (267)
Q Consensus       102 C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H-~r~H  180 (267)
                      |-+|++.|....-|..|++.                                  |-|+|.+|.|..-+.-.|..| |++|
T Consensus        13 cwycnrefddekiliqhqka----------------------------------khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----------------------------------KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhh----------------------------------ccceeeeehhhhccCCCceeehhhhh
Confidence            66777777777777666552                                  347777777766666666665 3444

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.37  E-value=0.048  Score=49.97  Aligned_cols=59  Identities=20%  Similarity=0.304  Sum_probs=44.9

Q ss_pred             CCCCCCCCCCCCCCCCCcccccc--cCCCC--CceeCc--cccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          128 DASASPNAAAASDVTPPPSATAS--SGSGG--RTHECS--ICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       128 ~c~~C~~~f~~~~~~~~L~~H~~--~h~g~--kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      .|..|...|....   .|..|.+  .|.++  ++|.|.  .|++.|.+...|..|..+|.+.....+.
T Consensus       291 ~~~~~~~~~s~~~---~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         291 KSKQCNISFSRSS---PLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             CCccccCCccccc---cccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            5667777777777   7777777  77888  888888  6888888888888888888877655443

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=93.81  E-value=0.062  Score=55.90  Aligned_cols=73  Identities=22%  Similarity=0.263  Sum_probs=49.2

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhh
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHK  177 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~  177 (267)
                      .+|.|.+|...|.....|..|++          .|.+.|....   -+.-|...|...+.| |.+|...|....+|..||
T Consensus      1283 ~~~~~~~~~~~~~~~~~l~~~~~----------k~~~~~~~~~---~~~~~~l~~~d~~~~-c~~c~~~~~~~~alqihm 1348 (1406)
T KOG1146|consen 1283 HRYLCRQCKMAFDGEAPLTAHQR----------KFCFAGRGSG---GSMPPPLRVPDCTYH-CLACEVLLSGREALQIHM 1348 (1406)
T ss_pred             hhHHHHHHHhhhcchhHHHHHHH----------HHHhccCccc---cCCCCcccCcccccc-chHHHhhcchhHHHHHHH
Confidence            45667777777777777777762          1223333333   444556666667788 999999999999999999


Q ss_pred             hh-cccCc
Q 024499          178 RC-HYEGG  184 (267)
Q Consensus       178 r~-H~~~~  184 (267)
                      |. |+..+
T Consensus      1349 ~~~~~~~k 1356 (1406)
T KOG1146|consen 1349 RSSAHRRK 1356 (1406)
T ss_pred             HHhhhccc
Confidence            94 44333

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.69  E-value=0.036  Score=30.45  Aligned_cols=21  Identities=29%  Similarity=0.689  Sum_probs=17.9

Q ss_pred             eeCccccccCCChhhHHhhhhh
Q 024499          158 HECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      ..|.+||+.| ..+.|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 77889999864

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.28  E-value=0.07  Score=31.35  Aligned_cols=23  Identities=22%  Similarity=0.608  Sum_probs=20.9

Q ss_pred             ceeccccccccCChHHHHHhHHh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      +|.|++|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            59999999999999999999875

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.00  E-value=0.09  Score=48.17  Aligned_cols=71  Identities=15%  Similarity=0.148  Sum_probs=61.1

Q ss_pred             cceeccccccccCChHHHHHhHH--hhCCC--CC-CCC--CCCCCCCCCCCCCCcccccccCCCCCceeCcc--ccccCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKA--SHRKN--AA-DAS--ASPNAAAASDVTPPPSATASSGSGGRTHECSI--CHKSFP  168 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~--~H~~~--k~-~c~--~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C~k~F~  168 (267)
                      .++.|..|...|.....|..|.+  .|..+  ++ .|.  .|++.|.+..   .+..|..+|.+.+++.|..  |.+.+.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRND---ALKRHILLHTSISPAKEKLLNSSSKFS  364 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccc---cccCCcccccCCCccccccccCccccc
Confidence            57999999999999999999999  79998  78 777  7999999999   9999999999999888865  444444


Q ss_pred             Chh
Q 024499          169 TGQ  171 (267)
Q Consensus       169 ~~~  171 (267)
                      ...
T Consensus       365 ~~~  367 (467)
T COG5048         365 PLL  367 (467)
T ss_pred             ccc
Confidence            433

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.97  E-value=0.12  Score=28.32  Aligned_cols=21  Identities=24%  Similarity=0.630  Sum_probs=17.6

Q ss_pred             eeccccccccCChHHHHHhHHh
Q 024499          100 YKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      ..|..||+.| ....|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            5799999999 67789999764

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.91  E-value=0.11  Score=30.44  Aligned_cols=22  Identities=18%  Similarity=0.555  Sum_probs=20.3

Q ss_pred             ceeCccccccCCChhhHHhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      +|.|.+|++.|....++..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5889999999999999999986

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.66  E-value=0.2  Score=37.95  Aligned_cols=33  Identities=12%  Similarity=0.226  Sum_probs=26.2

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499          124 KNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus       124 ~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      |.|..|..||+.|.--.              ..|..|++||..|.-.
T Consensus         7 GtKR~Cp~CG~kFYDLn--------------k~PivCP~CG~~~~~~   39 (108)
T PF09538_consen    7 GTKRTCPSCGAKFYDLN--------------KDPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCcccCCCCcchhccCC--------------CCCccCCCCCCccCcc
Confidence            55668899999998533              3788999999999766

The function of members of this family is unknown.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=90.37  E-value=0.089  Score=44.86  Aligned_cols=24  Identities=25%  Similarity=0.544  Sum_probs=17.4

Q ss_pred             CcceeccccccccCChHHHHHhHH
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKA  120 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~  120 (267)
                      ++.+.|++|++.|..+.-+.+..+
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r   26 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIR   26 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCce
Confidence            456899999999988765554443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=90.35  E-value=0.077  Score=47.19  Aligned_cols=27  Identities=26%  Similarity=0.674  Sum_probs=24.0

Q ss_pred             CCCCcceeccccccccCChHHHHHhHH
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKA  120 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~  120 (267)
                      ....|||+|++|+|.|+..-.|+.|+.
T Consensus       393 ~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         393 SAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cccCCceeccccchhhccCccceeccc
Confidence            456799999999999999999999965

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.28  E-value=0.25  Score=35.85  Aligned_cols=24  Identities=46%  Similarity=0.836  Sum_probs=21.7

Q ss_pred             ceeccccccccCChHHHHHhHHhh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      .|.|.+|++.|.+...|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            699999999999999999999975

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=88.50  E-value=0.13  Score=50.46  Aligned_cols=24  Identities=29%  Similarity=0.744  Sum_probs=18.1

Q ss_pred             eeccccccccC---------------ChHHHHHhHH-hhC
Q 024499          100 YKCSVCNKAFS---------------SYQALGGHKA-SHR  123 (267)
Q Consensus       100 ~~C~~C~k~F~---------------~~~~L~~H~~-~H~  123 (267)
                      +.|.+|++.|.               ....|+.|++ .|.
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H~  139 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQHK  139 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhhh
Confidence            56888888774               7888999985 454

>PRK04860 hypothetical protein; Provisional

Probab=88.05  E-value=0.3  Score=39.67  Aligned_cols=36  Identities=11%  Similarity=0.213  Sum_probs=31.0

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSN  195 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~  195 (267)
                      -+|.|. |++   ....+..|.++|.+++.|.|..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            379998 998   777889999999999999998887643

>KOG4124 consensus Putative transcriptional repressor regulating G2/M transition [Transcription; Cell cycle control, cell division, chromosome partitioning]

Probab=84.42  E-value=0.33  Score=43.81  Aligned_cols=69  Identities=25%  Similarity=0.482  Sum_probs=45.5

Q ss_pred             Ccceeccc--cccccCChHHHHHhHHh-hCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhH
Q 024499           97 KLSYKCSV--CNKAFSSYQALGGHKAS-HRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL  173 (267)
Q Consensus        97 ~~p~~C~~--C~k~F~~~~~L~~H~~~-H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L  173 (267)
                      .++|+|.+  |.|.+...-.|+.|... |.....         .-..   .-.-|.......|+|+|++|.+.++....|
T Consensus       347 ~~~~~~~vp~~~~~~~n~ng~~~~~~~~h~s~i~---------~~s~---~~~ph~~~~~~nk~~r~~i~~~~~k~~~~l  414 (442)
T KOG4124|consen  347 DKPYKCPVPNCDKAYKNQNGLKYHKLHGHCSPIT---------TPTP---APIPHQGFVVENKPYRCEVCSKRYKNLNGL  414 (442)
T ss_pred             cCCCCCCCCcchhhcccCcceeeccccCcCCCCC---------CCCC---CCCCcceeeeccCcccChhhhhhhccCCCC
Confidence            56899976  99999988888888653 421111         0000   112233344567999999999999888777


Q ss_pred             Hhhh
Q 024499          174 GGHK  177 (267)
Q Consensus       174 ~~H~  177 (267)
                      .-|.
T Consensus       415 ~~~~  418 (442)
T KOG4124|consen  415 KYHR  418 (442)
T ss_pred             Ccee
Confidence            6654

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.74  E-value=0.95  Score=35.08  Aligned_cols=37  Identities=14%  Similarity=0.112  Sum_probs=27.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHH
Q 024499          124 KNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALG  174 (267)
Q Consensus       124 ~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~  174 (267)
                      |-|..|..|++.|.-..              ..|..|++||..|.-...+.
T Consensus         7 GtKr~Cp~cg~kFYDLn--------------k~p~vcP~cg~~~~~~~~~~   43 (129)
T TIGR02300         7 GTKRICPNTGSKFYDLN--------------RRPAVSPYTGEQFPPEEALK   43 (129)
T ss_pred             CccccCCCcCccccccC--------------CCCccCCCcCCccCcchhhc
Confidence            45568888998887533              47899999999987664444

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=83.55  E-value=0.61  Score=30.67  Aligned_cols=30  Identities=13%  Similarity=0.205  Sum_probs=25.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      ....||.-++|+-|++.|.....+.+|...
T Consensus        10 ~~RDGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          10 RDRDGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             eccCCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            344588899999999999999999999863

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=80.81  E-value=1.4  Score=28.74  Aligned_cols=36  Identities=25%  Similarity=0.262  Sum_probs=26.0

Q ss_pred             ceeCccccccCCChhhHHhhhh-hcccC-cCCCCCCCCC
Q 024499          157 THECSICHKSFPTGQALGGHKR-CHYEG-GINNNNNNSS  193 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r-~H~~~-~~~~~~~~~s  193 (267)
                      .|.|++|++.| ....|..|.. .|..+ +...|..+..
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~   39 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSESKNVVCPICSS   39 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCCCCCccCCCchh
Confidence            48999999955 5678999976 45544 4566766654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	267
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	9e-08
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-05
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	4e-04

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 46.3 bits (110), Expect = 9e-08
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 156 RTHECSICHKSFPTGQALGGHKRCH 180
           R++ CS C + F + QALGGH   H
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVH 29

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 45.5 bits (108), Expect = 2e-07
 Identities = 15/26 (57%), Positives = 17/26 (65%)

Query: 99  SYKCSVCNKAFSSYQALGGHKASHRK 124
           SY CS C + F S QALGGH   HR+
Sbjct: 6   SYTCSFCKREFRSAQALGGHMNVHRR 31

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.4 bits (99), Expect = 1e-05
 Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 5/89 (5%)

Query: 99  SYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSG---SGG 155
            ++C  C+ A+ +   L  H         D   + N        P   +           
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 156 RTHECSICHKSFPTGQALGGH--KRCHYE 182
           +  +C  C  SF + Q L  H  K  HY+
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTKHYQ 107

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4 Length = 127

 Score = 38.4 bits (88), Expect = 4e-04
 Identities = 17/113 (15%), Positives = 29/113 (25%), Gaps = 7/113 (6%)

Query: 74  AERTPSLAPEQRPQDQFPEPPSLKLSYKCSVCNKAFSSYQALGGHKAS--HRKNAADASA 131
            +       +        E   +    +C VC+    S      H  S  H        A
Sbjct: 7   GDALDLPVGKDAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA 66

Query: 132 SPNAAAASDVTPP-PSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG 183
                 +        +    S    R+  C +C+ +F +          HY G
Sbjct: 67  INQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA----ESHYIG 115

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	267
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.82
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.76
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.74
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.73
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.72
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.7
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.69
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.68
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.68
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.64
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.64
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.64
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.62
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.58
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.58
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.57
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.57
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.55
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.54
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.5
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.5
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.5
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.5
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.48
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.46
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.42
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.41
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.41
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.4
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.38
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.38
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.28
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.27
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.23
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.21
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.21
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.2
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.18
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.18
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.16
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.15
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.15
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.14
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.14
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.14
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.14
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.13
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.12
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.11
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.1
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.05
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.02
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.01
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.0
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.98
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.97
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.97
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.97
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.95
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.95
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.94
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.94
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.93
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.93
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.92
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.91
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.9
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.87
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.85
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	98.85
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.84
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.84
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.84
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.84
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.84
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.84
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.83
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.82
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.8
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.8
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.79
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.78
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.78
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.78
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.78
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.77
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.76
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.75
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.74
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.73
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.73
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.73
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.72
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.72
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.72
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.71
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.71
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.71
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.7
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.7
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.68
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.67
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.66
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.66
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.66
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.65
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.63
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.61
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.59
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.59
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.58
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.58
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.56
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.55
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.55
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.55
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.54
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.51
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	98.49
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.46
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.46
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.45
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.44
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.43
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.42
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.42
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.4
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.4
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.4
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.39
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.38
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.38
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.38
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.37
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.37
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	98.36
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.72
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.36
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.35
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.35
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.33
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.33
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.32
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.32
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.32
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.32
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.32
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.3
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.28
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.57
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.23
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.21
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.2
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.2
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.5
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.5
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.18
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.16
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.1
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.37
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.09
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.06
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.05
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.96
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	97.92
2epa_A	72	Krueppel-like factor 10; transforming growth facto	97.87
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.86
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	97.71
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.1
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.0
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.84
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.54
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.97
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.42
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	86.45
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	86.0
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	85.87
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	84.96
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	84.5
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	84.46
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.88
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	82.33

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.82  E-value=6.6e-22  Score=155.41  Aligned_cols=93  Identities=17%  Similarity=0.250  Sum_probs=87.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      ..+.|+++|+|.+|++.|.....|..|+++|+++++ .|..|++.|....   .|..|+++|+++++|.|.+|++.|.+.
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~---~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAE---YRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHH---HHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeeccccc---chhhhccccCCCccccCCCCCCCcCCH
Confidence            345699999999999999999999999999999999 9999999999999   999999999999999999999999999


Q ss_pred             hhHHhhhhhcccCcCCC
Q 024499          171 QALGGHKRCHYEGGINN  187 (267)
Q Consensus       171 ~~L~~H~r~H~~~~~~~  187 (267)
                      ..|..|+++|+++++..
T Consensus        92 ~~L~~H~~~hh~~~p~~  108 (133)
T 2lt7_A           92 QFMSSHIKSVHSQDPSG  108 (133)
T ss_dssp             HHHHHHHHHHTCCCTTS
T ss_pred             HHHHHHhHHhcCCCCCC
Confidence            99999999998876543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.81  E-value=4.4e-20  Score=138.07  Aligned_cols=92  Identities=20%  Similarity=0.306  Sum_probs=86.9

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      ...+++|.|.+|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   88 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD---HLRDHRYIHSKEKPFKCQECGKGFCQSRT   88 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHH---HHHHHGGGSCCCCTTSCSSSCCCCSSHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHH---HHHHHHHHhCCCCCeECCCcCCcccCHHH
Confidence            4568899999999999999999999999999888 9999999999999   99999999999999999999999999999


Q ss_pred             HHhhhhhcccCcCCCC
Q 024499          173 LGGHKRCHYEGGINNN  188 (267)
Q Consensus       173 L~~H~r~H~~~~~~~~  188 (267)
                      |..|+++|.+++++..
T Consensus        89 L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           89 LAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHhCCCCCCcC
Confidence            9999999999987754

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=2.5e-20  Score=136.76  Aligned_cols=91  Identities=25%  Similarity=0.304  Sum_probs=85.4

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      ..++++|+|.+|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   79 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSS---SLNKHLRIHSDERPFKCQICPYASRNSSQ   79 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHH---HHHHHHHHSCCCCCEECSSSSCEESSHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHH---HHHHHHHHhCCCCCccCCCCCCccCCHHH
Confidence            3578899999999999999999999999999888 9999999999999   99999999999999999999999999999


Q ss_pred             HHhhhhhcccCcCCC
Q 024499          173 LGGHKRCHYEGGINN  187 (267)
Q Consensus       173 L~~H~r~H~~~~~~~  187 (267)
                      |..|+++|++++...
T Consensus        80 l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           80 LTVHLRSHTGDSGPS   94 (96)
T ss_dssp             HHHHHTTCCSCCCCC
T ss_pred             HHHHHHHhcCCCCCC
Confidence            999999999876543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=8.5e-19  Score=133.03  Aligned_cols=94  Identities=15%  Similarity=0.202  Sum_probs=84.4

Q ss_pred             CCCCCCCcceeccccccccCChHHHHHhHHh--hCCCCC--CCCCCCCCC--CCCCCCCCcccccccCCCCCceeCcccc
Q 024499           91 PEPPSLKLSYKCSVCNKAFSSYQALGGHKAS--HRKNAA--DASASPNAA--AASDVTPPPSATASSGSGGRTHECSICH  164 (267)
Q Consensus        91 ~~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~--H~~~k~--~c~~C~~~f--~~~~~~~~L~~H~~~h~g~kp~~C~~C~  164 (267)
                      ...+.++++|+|.+|++.|.....|..|+++  |.+.++  .|..|++.|  ....   .|..|+++|.++++|.|.+|+
T Consensus        11 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~---~l~~H~~~H~~~~~~~C~~C~   87 (115)
T 2dmi_A           11 GSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR---SLLEMEGKEDAQKVLKCMYCG   87 (115)
T ss_dssp             CCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCC---CCCCCCCSCCCCSSCBCSSSC
T ss_pred             eeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHH---HHHHHhhccCCCcceECCCCC
Confidence            3567789999999999999999999999998  776665  599999999  7888   999999999999999999999


Q ss_pred             ccCCChhhHHhhhhhcccCcCCC
Q 024499          165 KSFPTGQALGGHKRCHYEGGINN  187 (267)
Q Consensus       165 k~F~~~~~L~~H~r~H~~~~~~~  187 (267)
                      +.|.+...|..|+++|.......
T Consensus        88 k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           88 HSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             CBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             CccCCHHHHHHHHHHhCCcccCC
Confidence            99999999999999988664433

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.76  E-value=8.9e-20  Score=132.09  Aligned_cols=86  Identities=20%  Similarity=0.421  Sum_probs=79.4

Q ss_pred             CCcceecc--ccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           96 LKLSYKCS--VCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        96 g~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      |+++|.|.  .|++.|.....|..|+++|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   77 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSD---HLTTHIRTHTGEKPFACDICGRKFARSDE   77 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH---HHHHHHHHHHCCCCEECTTTCCEESSHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHH---HHHHHHHHcCCCCCccCCCCCchhCCHHH
Confidence            46889998  599999999999999999999888 9999999999999   99999999999999999999999999999


Q ss_pred             HHhhhhhcccCc
Q 024499          173 LGGHKRCHYEGG  184 (267)
Q Consensus       173 L~~H~r~H~~~~  184 (267)
                      |..|+++|++++
T Consensus        78 l~~H~~~H~~~k   89 (90)
T 1a1h_A           78 RKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHGGGGC--
T ss_pred             HHHHHHHhcccC
Confidence            999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=3.3e-19  Score=133.80  Aligned_cols=93  Identities=19%  Similarity=0.315  Sum_probs=85.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.  ++ .|..|++.|....   .|..|++ |.++++|+|.+|++.|.+.
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~---~l~~H~~-H~~~~~~~C~~C~~~f~~~   82 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPE---LKQEHES-KCEYKKLTCLECMRTFKSS   82 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHH---HHHHHHH-HCSTGGGEEGGGTEECSSH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHH---HHHHHHH-cCCCCCccCccccchhCCH
Confidence            55678999999999999999999999999994  45 8999999999998   9999996 9999999999999999999


Q ss_pred             hhHHhhhh-hcccCcCCCCCC
Q 024499          171 QALGGHKR-CHYEGGINNNNN  190 (267)
Q Consensus       171 ~~L~~H~r-~H~~~~~~~~~~  190 (267)
                      ..|..|++ +|.+++++.+..
T Consensus        83 ~~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           83 FSIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHHHHHcCCCCCCCCCC
Confidence            99999997 999998887643

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=3.5e-19  Score=134.10  Aligned_cols=89  Identities=18%  Similarity=0.229  Sum_probs=83.6

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      ..+.++++|.| +|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+.
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKH---HLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSH---HHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHH---HHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            34678999999 999999999999999999999888 9999999999999   999999999999999999999999999


Q ss_pred             hhHHhhhhhcccCc
Q 024499          171 QALGGHKRCHYEGG  184 (267)
Q Consensus       171 ~~L~~H~r~H~~~~  184 (267)
                      ..|..|+++|....
T Consensus        79 ~~l~~H~~~~~~~~   92 (110)
T 2csh_A           79 DSFHRHVTSCTKSY   92 (110)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccccc
Confidence            99999999998653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.75  E-value=9.7e-19  Score=118.33  Aligned_cols=58  Identities=24%  Similarity=0.553  Sum_probs=54.9

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhh
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGH  176 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H  176 (267)
                      |+||+|.+|+|.|.....|..|+++|                              +|+|||.|.+||+.|.+...|..|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~H------------------------------t~ekp~~C~~C~k~F~~~~~L~~H   51 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAH------------------------------LGYRPRSCPECGKCFRDQSEVNRH   51 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHH------------------------------HTCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHh------------------------------CCCcCeECCCCCCCcCCHHHHHHH
Confidence            78999999999999999999999999                              588999999999999999999999


Q ss_pred             hhhcccCc
Q 024499          177 KRCHYEGG  184 (267)
Q Consensus       177 ~r~H~~~~  184 (267)
                      +++|+|++
T Consensus        52 ~~~Htgep   59 (60)
T 4gzn_C           52 LKVHQNKP   59 (60)
T ss_dssp             GGGGSCC-
T ss_pred             hCccCCCC
Confidence            99999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=1.9e-19  Score=127.95  Aligned_cols=81  Identities=22%  Similarity=0.428  Sum_probs=77.6

Q ss_pred             ceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHK  177 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~  177 (267)
                      ||.|.+|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...|..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS---DMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHH---HHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHH---HHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            59999999999999999999999999888 9999999999999   9999999999999999999999999999999999


Q ss_pred             hhccc
Q 024499          178 RCHYE  182 (267)
Q Consensus       178 r~H~~  182 (267)
                      ++|+|
T Consensus        78 ~~H~g   82 (82)
T 2kmk_A           78 RKHTG   82 (82)
T ss_dssp             HHHC-
T ss_pred             HhhCC
Confidence            99975

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=6.1e-19  Score=129.08  Aligned_cols=87  Identities=25%  Similarity=0.369  Sum_probs=81.5

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCC--CceeCccccccCCChh
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGG--RTHECSICHKSFPTGQ  171 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~--kp~~C~~C~k~F~~~~  171 (267)
                      +++++|+|.+|++.|.....|..|+++|.++++ .|..|++.|....   .|..|+++|.++  ++|.|.+|++.|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~   79 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKD---RMSYHVRSHDGSVGKPYICQSCGKGFSRPD   79 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHH---HHHHHHHHHCCCCCSSBCCSSSCCCBSSHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHH---HHHHHHHHhcCCCCCceECCCccchhCCHH
Confidence            478999999999999999999999999999888 9999999999999   999999999987  9999999999999999


Q ss_pred             hHHhhhh-hcccCc
Q 024499          172 ALGGHKR-CHYEGG  184 (267)
Q Consensus       172 ~L~~H~r-~H~~~~  184 (267)
                      .|..|++ +|.+..
T Consensus        80 ~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           80 HLNGHIKQVHSGPS   93 (95)
T ss_dssp             HHHHHHHHTSCCCS
T ss_pred             HHHHHHHHhcCCCC
Confidence            9999996 787653

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.7e-18  Score=132.46  Aligned_cols=101  Identities=18%  Similarity=0.215  Sum_probs=92.6

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccc---cCCCCCceeCccccccCCCh
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATAS---SGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~---~h~g~kp~~C~~C~k~F~~~  170 (267)
                      +++++|+|.+|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+.   .|.++++|.|.+|++.|.+.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~   79 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKE---NLLEHEARNCMNRSEQVFTCSVCQETFRRR   79 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHH---HHHHHHHHCCCCSCCCCEECSSSCCEESSH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHH---HHHHHHhhhhcCCCCCCeECCCCCCccCCH
Confidence            478899999999999999999999999999888 9999999999988   9999988   46889999999999999999


Q ss_pred             hhHHhhhhhcccCcCCCCCCCCCCCCCC
Q 024499          171 QALGGHKRCHYEGGINNNNNNSSSNNNK  198 (267)
Q Consensus       171 ~~L~~H~r~H~~~~~~~~~~~~ss~~~~  198 (267)
                      ..|..|+++|.+++++.|..|...+...
T Consensus        80 ~~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           80 MELRLHMVSHTGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             HHHHHHHHHHSSSCSEECSSSCCEESSH
T ss_pred             HHHHHHHHHcCCCCCccCCCccchhCCH
Confidence            9999999999999999999888766553

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.72  E-value=5.6e-19  Score=134.33  Aligned_cols=99  Identities=19%  Similarity=0.313  Sum_probs=91.2

Q ss_pred             CCCcceeccc--cccccCChHHHHHhHHhhCCCCC-CCC--CCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC
Q 024499           95 SLKLSYKCSV--CNKAFSSYQALGGHKASHRKNAA-DAS--ASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        95 ~g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k~-~c~--~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      .++++|.|.+  |++.|.....|..|++.|.++++ .|.  .|++.|....   .|..|+++|.++++|.|.+|++.|.+
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~   78 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSD---QLKRHQRRHTGVKPFQCKTCQRKFSR   78 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHH---HHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHH---HHHHHHHHcCCCCCccCCccCchhCC
Confidence            4788999997  99999999999999999999888 887  7999999999   99999999999999999999999999


Q ss_pred             hhhHHhhhhhcccCcCCCC--CCCCCCCC
Q 024499          170 GQALGGHKRCHYEGGINNN--NNNSSSNN  196 (267)
Q Consensus       170 ~~~L~~H~r~H~~~~~~~~--~~~~ss~~  196 (267)
                      ...|..|+++|.+++++.|  ..|...+.
T Consensus        79 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  107 (119)
T 2jp9_A           79 SDHLKTHTRTHTGEKPFSCRWPSCQKKFA  107 (119)
T ss_dssp             HHHHHHHHHHHHTCCCEECCSTTCCCEES
T ss_pred             HHHHHHHHHHhcCCCCeeCCCCCCccccC
Confidence            9999999999999999988  66766544

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.70  E-value=2.2e-18  Score=142.08  Aligned_cols=100  Identities=22%  Similarity=0.345  Sum_probs=86.7

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhH
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL  173 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L  173 (267)
                      .++++|.|.+|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...|
T Consensus        73 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           73 TGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLA---HLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             HCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHH---HHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHH---HHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence            467789999999999999999999998888887 8889999998888   888999888888999999999999999999


Q ss_pred             HhhhhhcccCcCCCCCCCCCCCCC
Q 024499          174 GGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       174 ~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      ..|+++|.+++++.|..|...+..
T Consensus       150 ~~H~~~H~~~~~~~C~~C~~~f~~  173 (190)
T 2i13_A          150 HTHQRTHTGEKPYKCPECGKSFSR  173 (190)
T ss_dssp             HHHHHHHHCCCCEECTTTCCEESS
T ss_pred             HHHHHhcCCCCCeECCCCCCccCC
Confidence            999999998888888888776554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=8.6e-18  Score=123.90  Aligned_cols=85  Identities=20%  Similarity=0.389  Sum_probs=79.6

Q ss_pred             CCCcceeccc--cccccCChHHHHHhHHhhCCCCC-CCC--CCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC
Q 024499           95 SLKLSYKCSV--CNKAFSSYQALGGHKASHRKNAA-DAS--ASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        95 ~g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k~-~c~--~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      ..+++|.|.+  |++.|.....|..|++.|.++++ .|.  .|++.|....   .|..|+++|.++++|+|.+|++.|.+
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSD---ELTRHYRKHTGAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHH---HHHHHHHHHTSCCSCBCSSSCCBCSS
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHH---HHHHHHHHhCCCCCeECCCCcCccCC
Confidence            3678899997  99999999999999999999888 785  6999999998   99999999999999999999999999


Q ss_pred             hhhHHhhhhhccc
Q 024499          170 GQALGGHKRCHYE  182 (267)
Q Consensus       170 ~~~L~~H~r~H~~  182 (267)
                      ...|..|+++|.+
T Consensus        88 ~~~l~~H~~~H~~  100 (100)
T 2ebt_A           88 SDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999974

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.69  E-value=2e-17  Score=126.84  Aligned_cols=100  Identities=19%  Similarity=0.263  Sum_probs=86.9

Q ss_pred             Ccceecc--ccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCcc--ccccCCChh
Q 024499           97 KLSYKCS--VCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSI--CHKSFPTGQ  171 (267)
Q Consensus        97 ~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C~k~F~~~~  171 (267)
                      +++|.|.  .|++.|.....|..|+++| ++++ .|..|++.|....   .|..|+++|.++++|.|.+  |++.|.+..
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   78 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESS---KLKRHQLVHTGEKPFQCTFEGCGKRFSLDF   78 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHH---HHHHHGGGTSCCCCEECCSTTCCCEESCHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHH---HHHHHHHHcCCCCCeeCCCCCCcCccCCHH
Confidence            5679998  8999999999999999999 6666 8999999999988   9999999999999999986  999999999


Q ss_pred             hHHhhhhhcccCcCCCCC--CCCCCCCCCCC
Q 024499          172 ALGGHKRCHYEGGINNNN--NNSSSNNNKSN  200 (267)
Q Consensus       172 ~L~~H~r~H~~~~~~~~~--~~~ss~~~~~~  200 (267)
                      .|..|+++|.+++++.|.  .|...+.....
T Consensus        79 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           79 NLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             HHHHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred             HHHHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence            999999999999999994  58777766543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.68  E-value=1.2e-17  Score=133.11  Aligned_cols=86  Identities=16%  Similarity=0.266  Sum_probs=56.7

Q ss_pred             eeccccccccCChHHHHHhHHhhCCCCC-CCCC--CCCCCCCCCCCCCcccccccCCCCCceeCcc--ccccCCChhhHH
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHRKNAA-DASA--SPNAAAASDVTPPPSATASSGSGGRTHECSI--CHKSFPTGQALG  174 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~--C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C~k~F~~~~~L~  174 (267)
                      |.|.+|++.|.....|..|+++|.++++ .|..  |++.|....   .|..|+++|+++++|.|.+  |++.|.+...|.
T Consensus        63 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~  139 (155)
T 2rpc_A           63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSE---NLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRK  139 (155)
T ss_dssp             TTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHH---HHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHH
T ss_pred             cCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHH---HHHHHHHhhCCCCCccCCCCCCCCccCCHHHHH
Confidence            5666666666666666666666666665 5655  666666666   6666666666666666665  666666666666


Q ss_pred             hhhhhcccCcCCCC
Q 024499          175 GHKRCHYEGGINNN  188 (267)
Q Consensus       175 ~H~r~H~~~~~~~~  188 (267)
                      .|+++|++++++.+
T Consensus       140 ~H~~~H~~~k~~~c  153 (155)
T 2rpc_A          140 KHMHVHTSDKSGPS  153 (155)
T ss_dssp             HSSTTTTSCCCSCS
T ss_pred             HHHHHhcCCCCCCC
Confidence            66666666666654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.68  E-value=6.8e-18  Score=129.47  Aligned_cols=88  Identities=20%  Similarity=0.263  Sum_probs=78.4

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCC-CCCC--CCCCCCCCCCCCCcccccccCCCCCceeCc--cccccCCCh
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASA--SPNAAAASDVTPPPSATASSGSGGRTHECS--ICHKSFPTG  170 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~--C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~--~C~k~F~~~  170 (267)
                      ++++|.|.+|++.|.....|..|+++|.++++ .|..  |++.|....   .|..|+++|.++++|.|.  .|++.|.+.
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  107 (124)
T 1ubd_C           31 GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDF---NLRTHVRIHTGDRPYVCPFDGCNKKFAQS  107 (124)
T ss_dssp             SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHH---HHHHHHHHHHCCCCCCCCSTTCCCCCSST
T ss_pred             CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHH---HHHHHHHHhCCCCceECCCCCCCCccCCH
Confidence            56789999999999999999999999999988 8864  999999999   999999999999999996  599999999


Q ss_pred             hhHHhhhhhcccCcCC
Q 024499          171 QALGGHKRCHYEGGIN  186 (267)
Q Consensus       171 ~~L~~H~r~H~~~~~~  186 (267)
                      ..|..|+++|.+++.+
T Consensus       108 ~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          108 TNLKSHILTHAKAKNN  123 (124)
T ss_dssp             TTTHHHHHHHC-----
T ss_pred             HHHHHHHHHHcccccC
Confidence            9999999999988754

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.67  E-value=5.7e-18  Score=139.61  Aligned_cols=101  Identities=22%  Similarity=0.334  Sum_probs=84.0

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      +.++++|.|.+|++.|.....|..|++.|.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...
T Consensus        44 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  120 (190)
T 2i13_A           44 HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRA---NLRAHQRTHTGEKPYACPECGKSFSQLAH  120 (190)
T ss_dssp             C---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH---HHHHHHHHHHTCCCEECTTTCCEESSHHH
T ss_pred             cCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHH---HHHHHHHhcCCCCCCcCCCCCCccCCHHH
Confidence            4467788999999999888889999888888877 8888888888888   88888888888888999999999988888


Q ss_pred             HHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          173 LGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       173 L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      |..|+++|.+++++.|..|...+..
T Consensus       121 l~~H~~~h~~~~~~~C~~C~~~f~~  145 (190)
T 2i13_A          121 LRAHQRTHTGEKPYKCPECGKSFSR  145 (190)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             HHHHHHHhCCCCCeECCCCCcccCC
Confidence            9999888888888888887765544

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=1e-17  Score=120.83  Aligned_cols=82  Identities=21%  Similarity=0.416  Sum_probs=77.5

Q ss_pred             Ccceeccc--cccccCChHHHHHhHHhhCCCCC-CCC--CCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           97 KLSYKCSV--CNKAFSSYQALGGHKASHRKNAA-DAS--ASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        97 ~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k~-~c~--~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      .++|.|.+  |++.|.....|..|++.|.++++ .|.  .|++.|....   .|..|+++|.++++|.|.+|++.|....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~   79 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSD---ELTRHYRKHTGHRPFQCQKCDRAFSRSD   79 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHH---HHHHHHHHHHCCCCEECSSSSCEESSHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHH---HHHHHHHHcCCCCCccCCCCCcccCCHH
Confidence            46799999  99999999999999999999888 786  6999999998   9999999999999999999999999999


Q ss_pred             hHHhhhhhcc
Q 024499          172 ALGGHKRCHY  181 (267)
Q Consensus       172 ~L~~H~r~H~  181 (267)
                      .|..|+++|.
T Consensus        80 ~l~~H~~~H~   89 (89)
T 2wbs_A           80 HLALHMKRHF   89 (89)
T ss_dssp             HHHHHGGGGC
T ss_pred             HHHHHHHhhC
Confidence            9999999984

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.64  E-value=2.5e-17  Score=125.15  Aligned_cols=82  Identities=22%  Similarity=0.439  Sum_probs=78.5

Q ss_pred             CCcceecc--ccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeC--ccccccCCCh
Q 024499           96 LKLSYKCS--VCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHEC--SICHKSFPTG  170 (267)
Q Consensus        96 g~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C--~~C~k~F~~~  170 (267)
                      ++++|.|.  .|++.|.....|..|+++|.++++ .|..|++.|....   .|..|+++|+++++|.|  ++|++.|.+.
T Consensus        33 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           33 GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD---HLKTHTRTHTGEKPFSCRWPSCQKKFARS  109 (119)
T ss_dssp             TTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHH---HHHHHHHHHHTCCCEECCSTTCCCEESSH
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHH---HHHHHHHHhcCCCCeeCCCCCCccccCCH
Confidence            56789999  799999999999999999999988 9999999999999   99999999999999999  8999999999


Q ss_pred             hhHHhhhhhc
Q 024499          171 QALGGHKRCH  180 (267)
Q Consensus       171 ~~L~~H~r~H  180 (267)
                      ..|..|+++|
T Consensus       110 ~~L~~H~~~H  119 (119)
T 2jp9_A          110 DELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTC
T ss_pred             HHHHHHHhcC
Confidence            9999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.5e-17  Score=125.05  Aligned_cols=86  Identities=20%  Similarity=0.301  Sum_probs=78.2

Q ss_pred             CCCcceeccccccccCChHHHHHhHHh---hCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKAS---HRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~---H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      .++++|.|.+|++.|.....|..|++.   |.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+.
T Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           31 TGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM---ELRLHMVSHTGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             SSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHH---HHHHHHHHHSSSCSEECSSSCCEESSH
T ss_pred             CCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHH---HHHHHHHHcCCCCCccCCCccchhCCH
Confidence            357889999999999999999999986   456666 9999999999999   999999999999999999999999999


Q ss_pred             hhHHhhhh-hcccC
Q 024499          171 QALGGHKR-CHYEG  183 (267)
Q Consensus       171 ~~L~~H~r-~H~~~  183 (267)
                      ..|..|++ .|.++
T Consensus       108 ~~l~~H~~~~H~~~  121 (124)
T 2dlq_A          108 KDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHHCCCC
Confidence            99999998 56554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.64  E-value=2.5e-16  Score=125.38  Aligned_cols=102  Identities=20%  Similarity=0.243  Sum_probs=91.8

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHh-hCCCCC---------CCCCCCCCCCCCCCCCCcccccccCCCCCceeCcc-
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKAS-HRKNAA---------DASASPNAAAASDVTPPPSATASSGSGGRTHECSI-  162 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~-H~~~k~---------~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~-  162 (267)
                      ...+..|.|.+|++.|.....|..|++. |.+..+         .|..|++.|....   .|..|+++|.++++|.|.+ 
T Consensus        20 ~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~   96 (155)
T 2rpc_A           20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY---KLVNHIRVHTGEKPFPCPFP   96 (155)
T ss_dssp             CTTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHH---HHHHHTHHHHCCCSEECSCT
T ss_pred             chhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHH---HHHHHHHhcCCCCcccCCcC
Confidence            3467889999999999999999999997 776542         6999999999998   9999999999999999998 


Q ss_pred             -ccccCCChhhHHhhhhhcccCcCCCCCC--CCCCCCCC
Q 024499          163 -CHKSFPTGQALGGHKRCHYEGGINNNNN--NSSSNNNK  198 (267)
Q Consensus       163 -C~k~F~~~~~L~~H~r~H~~~~~~~~~~--~~ss~~~~  198 (267)
                       |++.|.+...|..|+++|.+++++.|..  |...+...
T Consensus        97 ~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~  135 (155)
T 2rpc_A           97 GCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANS  135 (155)
T ss_dssp             TTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSH
T ss_pred             CCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCH
Confidence             9999999999999999999999999986  87766653

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.5e-16  Score=124.33  Aligned_cols=83  Identities=19%  Similarity=0.339  Sum_probs=48.0

Q ss_pred             CCcceeccc--cccccCChHHHHHhHHhhCCCCC-CCCC--CCCCCCCCCCCCCccccc-ccCCCCCceeCcc--ccccC
Q 024499           96 LKLSYKCSV--CNKAFSSYQALGGHKASHRKNAA-DASA--SPNAAAASDVTPPPSATA-SSGSGGRTHECSI--CHKSF  167 (267)
Q Consensus        96 g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k~-~c~~--C~~~f~~~~~~~~L~~H~-~~h~g~kp~~C~~--C~k~F  167 (267)
                      ++++|.|.+  |++.|.....|..|+++|.++++ .|..  |++.|....   .|..|+ ++|.++++|.|.+  |++.|
T Consensus        64 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~L~~H~~~~H~~~~~~~C~~~~C~~~f  140 (155)
T 2gli_A           64 GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNAS---DRAKHQNRTHSNEKPYVCKLPGCTKRY  140 (155)
T ss_dssp             CCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSS---TTHHHHHHTTCSCCCEECCSTTTCCEE
T ss_pred             CCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHH---HHHHHHHHhcCCCCCeeCCCCCCcccc
Confidence            445556653  66666666666666655555555 5554  666665555   555665 5555556666655  66666


Q ss_pred             CChhhHHhhhhhcc
Q 024499          168 PTGQALGGHKRCHY  181 (267)
Q Consensus       168 ~~~~~L~~H~r~H~  181 (267)
                      .+...|..|+++|+
T Consensus       141 ~~~~~L~~H~~~hh  154 (155)
T 2gli_A          141 TDPSSLRKHVKTVH  154 (155)
T ss_dssp             SSHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHhhc
Confidence            66666666655554

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=4.5e-16  Score=123.69  Aligned_cols=101  Identities=14%  Similarity=0.196  Sum_probs=86.1

Q ss_pred             CCCCcceeccc-----cccccCChHHHHHhHHhhCCCCC-CCC--CCCCCCCCCCCCCCcccccccCCCCCceeCcc--c
Q 024499           94 PSLKLSYKCSV-----CNKAFSSYQALGGHKASHRKNAA-DAS--ASPNAAAASDVTPPPSATASSGSGGRTHECSI--C  163 (267)
Q Consensus        94 ~~g~~p~~C~~-----C~k~F~~~~~L~~H~~~H~~~k~-~c~--~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C  163 (267)
                      +.++++|.|.+     |++.|.....|..|++.|.++++ .|.  .|++.|....   .|..|+++|.++++|.|.+  |
T Consensus        29 h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C  105 (155)
T 2gli_A           29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE---NLKTHLRSHTGEKPYMCEHEGC  105 (155)
T ss_dssp             SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHH---HHHHHHHHTTTCCCEECCSTTC
T ss_pred             CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHH---HHHHHHHHcCCCCCeeCCCCCC
Confidence            34677888875     34999999999999999998888 786  4999999988   9999999999999999998  9


Q ss_pred             cccCCChhhHHhhh-hhcccCcCCCCCC--CCCCCCC
Q 024499          164 HKSFPTGQALGGHK-RCHYEGGINNNNN--NSSSNNN  197 (267)
Q Consensus       164 ~k~F~~~~~L~~H~-r~H~~~~~~~~~~--~~ss~~~  197 (267)
                      ++.|.+...|..|+ ++|.+++++.|..  +...+..
T Consensus       106 ~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~  142 (155)
T 2gli_A          106 SKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTD  142 (155)
T ss_dssp             CCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESS
T ss_pred             CCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCC
Confidence            99999999999998 7999999988876  7665443

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=1.7e-15  Score=105.76  Aligned_cols=65  Identities=28%  Similarity=0.498  Sum_probs=58.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      ....++++|+|.+|++.|.....|..|+++|                              .++++|+|.+|++.|.+..
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H------------------------------~~~~~~~C~~C~k~f~~~~   59 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVH------------------------------TGEKPYRCNICGAQFNRPA   59 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHH------------------------------CCCCSEECTTTCCEESCHH
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHc------------------------------CCCCCEECCCCCchhCCHH
Confidence            3455789999999999999999999999999                              4678999999999999999


Q ss_pred             hHHhhhhhcccCcCC
Q 024499          172 ALGGHKRCHYEGGIN  186 (267)
Q Consensus       172 ~L~~H~r~H~~~~~~  186 (267)
                      .|..|+++|++++++
T Consensus        60 ~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           60 NLKTHTRIHSGEKPY   74 (74)
T ss_dssp             HHHHHHHHHCCSCCC
T ss_pred             HHHHHHHhcCCCCCC
Confidence            999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.57  E-value=1.1e-15  Score=125.77  Aligned_cols=85  Identities=19%  Similarity=0.285  Sum_probs=38.2

Q ss_pred             CCCcceecc--ccccccCChHHHHHhH-HhhC-CCCC-CC--CCCCCCCCCCCCCCCcccccccCCCCCceeCcc--ccc
Q 024499           95 SLKLSYKCS--VCNKAFSSYQALGGHK-ASHR-KNAA-DA--SASPNAAAASDVTPPPSATASSGSGGRTHECSI--CHK  165 (267)
Q Consensus        95 ~g~~p~~C~--~C~k~F~~~~~L~~H~-~~H~-~~k~-~c--~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C~k  165 (267)
                      .++++|.|.  .|++.|.....|..|+ +.|. +.++ .|  ..|++.|....   .|..|+++|+++++|.|.+  |++
T Consensus        68 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~---~L~~H~~~H~~~~~~~C~~~~C~k  144 (190)
T 1tf6_A           68 TGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN---QLKVHQFSHTQQLPYECPHEGCDK  144 (190)
T ss_dssp             TTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHH---HHHHHHGGGSSSCSSBCCSSSCCC
T ss_pred             cCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHH---HHHHHHHHhCCCCCccCCCCCCCc
Confidence            344444444  4444444444444444 3331 2222 34  44444444444   4444444444444444444  444


Q ss_pred             cCCChhhHHhhhhhccc
Q 024499          166 SFPTGQALGGHKRCHYE  182 (267)
Q Consensus       166 ~F~~~~~L~~H~r~H~~  182 (267)
                      .|.+...|..|+++|.+
T Consensus       145 ~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          145 RFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             BCSSHHHHHHHHTSSCS
T ss_pred             hhcCHHHHHHHHHHhCC
Confidence            44444444444444444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.57  E-value=2.2e-17  Score=119.49  Aligned_cols=82  Identities=13%  Similarity=0.119  Sum_probs=76.9

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHh
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGG  175 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~  175 (267)
                      +++|.|.+|++.|.....|..|+++|.++++ .|..|++.|....   .|..|+++|.+ ++|.|..|++.|.....|..
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~---~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~   76 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD---ERKRHRDIQHI-LPILEDKVEELLSKNYHLEN   76 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH---HHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHH---HHHHHHHHhCC-CcchHHHHHHHHHHHhhhHH
Confidence            5789999999999999999999999999998 9999999999999   99999999885 89999999999999999999


Q ss_pred             hhhhccc
Q 024499          176 HKRCHYE  182 (267)
Q Consensus       176 H~r~H~~  182 (267)
                      |++.+++
T Consensus        77 H~~~~h~   83 (88)
T 1llm_C           77 EVARLKK   83 (88)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9987654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.7e-15  Score=102.96  Aligned_cols=65  Identities=25%  Similarity=0.272  Sum_probs=59.1

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      .+.++++|+|.+|++.|.....|..|+++|                              .++++|+|.+|++.|.+...
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H------------------------------~~~~~~~C~~C~~~f~~~~~   52 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIH------------------------------CTDRPFKCNYCSFDTKQPSN   52 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGG------------------------------CCSCSEECSSSSCEESSHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHc------------------------------CCCCCEeCCCCCCccCCHHH
Confidence            356789999999999999999999999988                              46789999999999999999


Q ss_pred             HHhhhhhcccCcCCC
Q 024499          173 LGGHKRCHYEGGINN  187 (267)
Q Consensus       173 L~~H~r~H~~~~~~~  187 (267)
                      |..|+++|+++++..
T Consensus        53 L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A           53 LSKHMKKFHGDMSGP   67 (70)
T ss_dssp             HHHHHHHHHSSSCCS
T ss_pred             HHHHHHHHhCCCCCC
Confidence            999999999987654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=5.4e-15  Score=104.01  Aligned_cols=67  Identities=31%  Similarity=0.591  Sum_probs=59.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      ....++++|+|.+|++.|.....|..|+++|                              .++++|.|.+|++.|.+..
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h------------------------------~~~~~~~C~~C~~~f~~~~   60 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTH------------------------------TGEKPYKCDECGKAFIQRS   60 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTT------------------------------CCSCSEECSSSCCEESSHH
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHc------------------------------CCCcCeeCCCCCCccCCHH
Confidence            3455789999999999999999999999888                              4678999999999999999


Q ss_pred             hHHhhhhhcccCcCCCC
Q 024499          172 ALGGHKRCHYEGGINNN  188 (267)
Q Consensus       172 ~L~~H~r~H~~~~~~~~  188 (267)
                      .|..|+++|++++++.|
T Consensus        61 ~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           61 HLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             HHHHHGGGSCCCCCCCC
T ss_pred             HHHHHHHHhCCCCCCCC
Confidence            99999999999988764

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.6e-16  Score=109.74  Aligned_cols=70  Identities=20%  Similarity=0.234  Sum_probs=54.3

Q ss_pred             CCCcceeccc--cccccCChHHHHHhHH-hhCCCCC-CCCC--CCCCCCCCCCCCCcccccccCCCCCceeCccccccC
Q 024499           95 SLKLSYKCSV--CNKAFSSYQALGGHKA-SHRKNAA-DASA--SPNAAAASDVTPPPSATASSGSGGRTHECSICHKSF  167 (267)
Q Consensus        95 ~g~~p~~C~~--C~k~F~~~~~L~~H~~-~H~~~k~-~c~~--C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F  167 (267)
                      +++++|.|..  |++.|.....|..|++ .|.++++ .|..  |++.|....   .|..|+++|+++++|.|.+|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~---~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKK---HLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHH---HHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHH---HHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4788999997  9999999999999999 7976666 6665  666666666   666666666666667777776666

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=6.2e-15  Score=102.43  Aligned_cols=64  Identities=33%  Similarity=0.526  Sum_probs=58.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|                              .++++|+|.+|++.|.+..
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h------------------------------~~~~~~~C~~C~~~f~~~~   56 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVH------------------------------TGEKPYKCLECGKAFSQNS   56 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGG------------------------------GCSCCEECSSSCCEESSHH
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhc------------------------------CCCCCeECCCCCcccCCHH
Confidence            5577899999999999999999999999988                              4678999999999999999


Q ss_pred             hHHhhhhhcccCcC
Q 024499          172 ALGGHKRCHYEGGI  185 (267)
Q Consensus       172 ~L~~H~r~H~~~~~  185 (267)
                      .|..|+++|+++..
T Consensus        57 ~L~~H~~~H~~~~~   70 (72)
T 1x6e_A           57 GLINHQRIHTSGPS   70 (72)
T ss_dssp             HHHHHHHHHHSSSS
T ss_pred             HHHHHHHhcCCCCC
Confidence            99999999997753

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.55  E-value=5.6e-16  Score=110.40  Aligned_cols=77  Identities=19%  Similarity=0.221  Sum_probs=73.3

Q ss_pred             ceec--cccccccCChHHHHHhHHhhCCCCC-CCCC--CCCCCCCCCCCCCcccccccCCCCCceeCcc---ccccCCCh
Q 024499           99 SYKC--SVCNKAFSSYQALGGHKASHRKNAA-DASA--SPNAAAASDVTPPPSATASSGSGGRTHECSI---CHKSFPTG  170 (267)
Q Consensus        99 p~~C--~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~--C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~---C~k~F~~~  170 (267)
                      ||+|  .+|++.|.....|..|+++|.++++ .|..  |++.|....   .|..|+++|++   |.|.+   |++.|...
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~h~~---~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPS---RLKRHEKVHAG---YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHH---HHHHHHHHHHS---EECCSCSSCCCEESSH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHH---HHHHHHHHhCC---CCCCCCCCCCCccCCH
Confidence            5999  8999999999999999999999988 8987  999999999   99999999998   99999   99999999


Q ss_pred             hhHHhhhhhcc
Q 024499          171 QALGGHKRCHY  181 (267)
Q Consensus       171 ~~L~~H~r~H~  181 (267)
                      ..|..|+++|+
T Consensus        75 ~~l~~H~~~hh   85 (85)
T 2j7j_A           75 TLYLKHVAECH   85 (85)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhcC
Confidence            99999999885

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.54  E-value=2.7e-15  Score=123.47  Aligned_cols=99  Identities=15%  Similarity=0.144  Sum_probs=59.4

Q ss_pred             CCcceec--cccccccCChHHHHHhHHhhCCCCC-CCC--CCCCCCCCCCCCCCccccc-ccC-CCCCceeC--cccccc
Q 024499           96 LKLSYKC--SVCNKAFSSYQALGGHKASHRKNAA-DAS--ASPNAAAASDVTPPPSATA-SSG-SGGRTHEC--SICHKS  166 (267)
Q Consensus        96 g~~p~~C--~~C~k~F~~~~~L~~H~~~H~~~k~-~c~--~C~~~f~~~~~~~~L~~H~-~~h-~g~kp~~C--~~C~k~  166 (267)
                      ++++|.|  .+|++.|.....|..|+++|.++++ .|.  .|++.|....   .|..|+ +.| .++++|.|  .+|++.
T Consensus        39 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~---~l~~H~~~~h~~~~~~~~C~~~~C~k~  115 (190)
T 1tf6_A           39 GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA---NMKKHFNRFHNIKICVYVCHFENCGKA  115 (190)
T ss_dssp             CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH---HHHHHHHTTSSTTTSCCEECSSSSCEE
T ss_pred             CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH---HHHHHHHHhcCCCcceeeCCCCCCccc
Confidence            4555666  5566666666666666666655555 555  5666666555   566665 445 34556666  556666


Q ss_pred             CCChhhHHhhhhhcccCcCCCCCC--CCCCCCC
Q 024499          167 FPTGQALGGHKRCHYEGGINNNNN--NSSSNNN  197 (267)
Q Consensus       167 F~~~~~L~~H~r~H~~~~~~~~~~--~~ss~~~  197 (267)
                      |.+...|..|+++|.+++++.|..  |...+..
T Consensus       116 f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~  148 (190)
T 1tf6_A          116 FKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL  148 (190)
T ss_dssp             CSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSS
T ss_pred             cCCHHHHHHHHHHhCCCCCccCCCCCCCchhcC
Confidence            666666666666666666666654  5555443

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.6e-14  Score=104.35  Aligned_cols=63  Identities=22%  Similarity=0.407  Sum_probs=56.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      ......++|.|++|+|.|.....|..|+++|                              +++|||.|.+|++.|.+..
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H------------------------------~~~k~~~C~~C~k~F~~~~   70 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLL------------------------------HAAQVFPCKYCPATFYSSP   70 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTT------------------------------SCSSSEECTTSSCEESSHH
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhc------------------------------cCCCccCCCCCCCEeCCHH
Confidence            3455788999999999999999999999988                              5789999999999999999


Q ss_pred             hHHhhh-hhcccCc
Q 024499          172 ALGGHK-RCHYEGG  184 (267)
Q Consensus       172 ~L~~H~-r~H~~~~  184 (267)
                      .|..|+ ++|.++.
T Consensus        71 ~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           71 GLTRHINKCHPSEN   84 (85)
T ss_dssp             HHHHHHHTTCTTCC
T ss_pred             HHHHhCcccCcCCC
Confidence            999997 5787764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.3e-14  Score=100.96  Aligned_cols=68  Identities=18%  Similarity=0.355  Sum_probs=57.5

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhH
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQAL  173 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L  173 (267)
                      +.++++|+|.+|++.|.....|..|+++|.+.                           .++++|.|.+|++.|.+...|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~---------------------------~~~~~~~C~~C~k~f~~~~~L   54 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAET---------------------------VAALRFPCEFCGKRFEKPDSV   54 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHH---------------------------TTTCCEECTTTCCEESSHHHH
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhcc---------------------------CCCcccCCCCCCchhCCHHHH
Confidence            56899999999999999999999999999421                           147899999999999999999


Q ss_pred             Hhhhh-hcccCcCCCC
Q 024499          174 GGHKR-CHYEGGINNN  188 (267)
Q Consensus       174 ~~H~r-~H~~~~~~~~  188 (267)
                      ..|++ .|.+..+...
T Consensus        55 ~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A           55 AAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             HHHHHHTSTTTSSCCS
T ss_pred             HHHHHHhCCCCCCCcc
Confidence            99995 5666655543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.50  E-value=9.8e-15  Score=96.38  Aligned_cols=57  Identities=28%  Similarity=0.421  Sum_probs=49.6

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHh
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGG  175 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~  175 (267)
                      |+++|+|.+|++.|.....|..|+++|                              +++++|.|.+|++.|.....|..
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h------------------------------~~~~~~~C~~C~~~f~~~~~l~~   50 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTH------------------------------TGEKPYKCEFCEYAAAQKTSLRY   50 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHH------------------------------HCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHc------------------------------CCCCCcCCCCCcchhCCHHHHHH
Confidence            468899999999999999999999998                              46789999999999999999999


Q ss_pred             hhhhccc
Q 024499          176 HKRCHYE  182 (267)
Q Consensus       176 H~r~H~~  182 (267)
                      |+++|++
T Consensus        51 H~~~hh~   57 (57)
T 3uk3_C           51 HLERHHK   57 (57)
T ss_dssp             HHHHHC-
T ss_pred             HHHHhcC
Confidence            9999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.50  E-value=2.1e-15  Score=118.17  Aligned_cols=81  Identities=15%  Similarity=0.132  Sum_probs=70.9

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCC------CceeCcccccc
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGG------RTHECSICHKS  166 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~------kp~~C~~C~k~  166 (267)
                      +.++++|+|++|++.|.....|..|+++|+++++ .|..|++.|....   .|..|+++|+++      ++|+|.+|++.
T Consensus        45 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~---~L~~H~~~hh~~~p~~~~k~~~C~~C~k~  121 (133)
T 2lt7_A           45 HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ---FMSSHIKSVHSQDPSGDSKLYRLHPCRSL  121 (133)
T ss_dssp             HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH---HHHHHHHHHTCCCTTSSSCCEEECCCCSS
T ss_pred             cCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH---HHHHHhHHhcCCCCCCCCCCeecCCCCch
Confidence            4578999999999999999999999999999999 9999999999999   999999998765      46999999998


Q ss_pred             CCChhhHHhhhhhcccCc
Q 024499          167 FPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       167 F~~~~~L~~H~r~H~~~~  184 (267)
                      |.       |+++|++++
T Consensus       122 ~~-------~~~~h~~ek  132 (133)
T 2lt7_A          122 QI-------RQYAYLSDR  132 (133)
T ss_dssp             CC-------CCCHHHHCC
T ss_pred             hh-------hcccccccC
Confidence            85       455565543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2e-15  Score=111.66  Aligned_cols=67  Identities=16%  Similarity=0.253  Sum_probs=55.9

Q ss_pred             CCCCCCcceeccccccccC-ChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCC-CCceeCccccccCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFS-SYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSG-GRTHECSICHKSFPT  169 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~-~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g-~kp~~C~~C~k~F~~  169 (267)
                      ..+.++++|+|.+|++.|. ....|..|+++|                              ++ +++|.|.+|++.|.+
T Consensus        17 ~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h------------------------------~~~~~~~~C~~C~k~F~~   66 (98)
T 2gqj_A           17 RAIHERGEAVCPTCNVVTRKTLVGLKKHMEVC------------------------------QKLQDALKCQHCRKQFKS   66 (98)
T ss_dssp             HTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHH------------------------------HHHHHHHSCSSSCCCCSC
T ss_pred             HHhccCCCcCCCCCCCChhhhHHHHHHHHHHH------------------------------cCCCCCEECCCCCCccCC
Confidence            4456777788888888887 778788887777                              45 789999999999999


Q ss_pred             hhhHHhhhhhcccCcCCCC
Q 024499          170 GQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       170 ~~~L~~H~r~H~~~~~~~~  188 (267)
                      ...|..|+++|+++++...
T Consensus        67 ~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           67 KAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             HHHHHHHHHHHSCSCSSCC
T ss_pred             HHHHHHHHHHHcCCCCCCC
Confidence            9999999999999887654

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.1e-13  Score=98.80  Aligned_cols=77  Identities=21%  Similarity=0.273  Sum_probs=64.7

Q ss_pred             CCCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           91 PEPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        91 ~~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      ...+.++++|.|.+|++.|.....|..|++.|....                          ..+++|.|.+|++.|.+.
T Consensus         7 ~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~--------------------------~~~~~~~C~~C~~~f~~~   60 (86)
T 1x6h_A            7 GRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN--------------------------FVPAAFVCSKCGKTFTRR   60 (86)
T ss_dssp             STTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS--------------------------CCCCCEECSSSCCEESCH
T ss_pred             cceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc--------------------------CCCcceECCCCCChhCCH
Confidence            356778999999999999999999999998774210                          124789999999999999


Q ss_pred             hhHHhhhhhcccCcCCCCCCCCC
Q 024499          171 QALGGHKRCHYEGGINNNNNNSS  193 (267)
Q Consensus       171 ~~L~~H~r~H~~~~~~~~~~~~s  193 (267)
                      ..|..|+++|+++..+.+..+..
T Consensus        61 ~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A           61 NTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             HHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             HHHHHHHHHccCCCCcccCCCCC
Confidence            99999999999999888866544

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=4.5e-14  Score=93.14  Aligned_cols=56  Identities=25%  Similarity=0.437  Sum_probs=52.1

Q ss_pred             ceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      ||+|.+|++.|.....|..|+++|                              .++++|.|.+|++.|.+...|..|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h------------------------------~~~~~~~C~~C~~~f~~~~~l~~H~~   50 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTH------------------------------TDVRPYHCTYCNFSFKTKGNLTKHMK   50 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHT------------------------------SSCCCEECSSSSCEESSHHHHHHHHH
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhc------------------------------CCCCCccCCCCCchhcCHHHHHHHHH
Confidence            599999999999999999999988                              46789999999999999999999999


Q ss_pred             hcccCc
Q 024499          179 CHYEGG  184 (267)
Q Consensus       179 ~H~~~~  184 (267)
                      +|.+++
T Consensus        51 ~h~~~k   56 (57)
T 1bbo_A           51 SKAHSK   56 (57)
T ss_dssp             SSSSCC
T ss_pred             HhcccC
Confidence            998875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=1.2e-14  Score=108.56  Aligned_cols=70  Identities=16%  Similarity=0.158  Sum_probs=56.9

Q ss_pred             CCCCcceeccccccccCChHHHHHhHH-hhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKA-SHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQA  172 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~  172 (267)
                      ..|++||.|.+|++.|.....|..|++ .|.+.                           .++++|.|.+|++.|.+...
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~---------------------------~~ekpf~C~~Cgk~F~~~~~   65 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV---------------------------VLNSSYVCVECNFLTKRYDA   65 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC---------------------------CCSCCEEETTTTEEESSTHH
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC---------------------------CCCCCcCCCCCCcccCCHHH
Confidence            458999999999999999999999997 47421                           24677888888888888888


Q ss_pred             HHhh-hhhcccCcCCCCCC
Q 024499          173 LGGH-KRCHYEGGINNNNN  190 (267)
Q Consensus       173 L~~H-~r~H~~~~~~~~~~  190 (267)
                      |..| +++|+++++|.|..
T Consensus        66 L~~H~~r~Htgekpy~C~~   84 (102)
T 2ghf_A           66 LSEHNLKYHPGEENFKLTM   84 (102)
T ss_dssp             HHTHHHHTSTTCCCEEEEE
T ss_pred             HHHHHHHhcCCCCCeeCCc
Confidence            8888 67888888877755

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=6.7e-14  Score=95.21  Aligned_cols=61  Identities=18%  Similarity=0.501  Sum_probs=54.9

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHh-hCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKAS-HRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~-H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      .+.++++|.|.+|++.|.....|..|++. |.                             .++++|.|.+|++.|.+..
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~-----------------------------~~~~~~~C~~C~k~f~~~~   54 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHK-----------------------------RNVKVYPCPFCFKEFTRKD   54 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSS-----------------------------SSCCCEECTTTCCEESCHH
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcC-----------------------------CCCcCeECCCCCCccCCHH
Confidence            35688999999999999999999999997 51                             3678999999999999999


Q ss_pred             hHHhhhhhccc
Q 024499          172 ALGGHKRCHYE  182 (267)
Q Consensus       172 ~L~~H~r~H~~  182 (267)
                      .|..|+++|++
T Consensus        55 ~L~~H~~~~H~   65 (66)
T 2drp_A           55 NMTAHVKIIHK   65 (66)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHcC
Confidence            99999999875

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=3.1e-14  Score=105.15  Aligned_cols=72  Identities=7%  Similarity=0.003  Sum_probs=50.9

Q ss_pred             CChHHHHHhHHhhCCCCC-CCCCCCCCC-CCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhh-hhhcccCcC
Q 024499          110 SSYQALGGHKASHRKNAA-DASASPNAA-AASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGH-KRCHYEGGI  185 (267)
Q Consensus       110 ~~~~~L~~H~~~H~~~k~-~c~~C~~~f-~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H-~r~H~~~~~  185 (267)
                      .....|..|++.|.++++ .|..|++.| ....   .|..|+++| ++++|.|.+|+|.|.+...|..| +++|.++..
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~---~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           17 AAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIE---GLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CTTCHHHHHHHHHHHTSCEECTTTCSCEESSHH---HHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCchHHHHHHHHhcCCCCcCCCCCCCCcccCHH---HHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            344455555555555555 555555555 5555   555666666 77899999999999999999999 899986543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=3.7e-13  Score=94.49  Aligned_cols=63  Identities=21%  Similarity=0.368  Sum_probs=55.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHH-hhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCCh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKA-SHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTG  170 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~  170 (267)
                      ..+.++++|+|.+|++.|.....|..|++ .|.                             .++++|+|.+|++.|.+.
T Consensus         8 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~-----------------------------~~~~~~~C~~C~~~f~~~   58 (77)
T 2ct1_A            8 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT-----------------------------ENVAKFHCPHCDTVIARK   58 (77)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS-----------------------------SSCSSEECSSSSCEESSH
T ss_pred             cccCCCCCeECCCcCchhCCHHHHHHHHHHhcC-----------------------------CCCCccCCCCCCCccCCH
Confidence            56779999999999999999999999997 452                             124899999999999999


Q ss_pred             hhHHhhhhhcccC
Q 024499          171 QALGGHKRCHYEG  183 (267)
Q Consensus       171 ~~L~~H~r~H~~~  183 (267)
                      ..|..|+++|++.
T Consensus        59 ~~L~~H~~~~H~~   71 (77)
T 2ct1_A           59 SDLGVHLRKQHSY   71 (77)
T ss_dssp             HHHHHHHHHTSCC
T ss_pred             HHHHHHHHHhCCC
Confidence            9999999987654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.9e-13  Score=91.16  Aligned_cols=56  Identities=29%  Similarity=0.616  Sum_probs=50.8

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhh
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHK  177 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~  177 (267)
                      ++|+|.+|++.|.....|..|+++|                              +++++|.|.+|++.|.+...|..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h------------------------------~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSH------------------------------TNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTT------------------------------TSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHh------------------------------CCCCCccCCCCCCccCCHHHHHHHH
Confidence            4799999999999999999999988                              4678999999999999999999996


Q ss_pred             -hhcccC
Q 024499          178 -RCHYEG  183 (267)
Q Consensus       178 -r~H~~~  183 (267)
                       ++|.++
T Consensus        51 ~~~H~~~   57 (60)
T 2adr_A           51 QKIHSGN   57 (60)
T ss_dssp             TTTSCCS
T ss_pred             HHHcCCc
Confidence             688765

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=3.8e-13  Score=93.30  Aligned_cols=60  Identities=28%  Similarity=0.571  Sum_probs=54.4

Q ss_pred             CCCCCCcceecc--ccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC
Q 024499           92 EPPSLKLSYKCS--VCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        92 ~~~~g~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      ..+.++++|.|.  .|++.|.....|..|+++|                              .++++|.|.+|++.|.+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h------------------------------~~~~~~~C~~C~~~f~~   61 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIH------------------------------TGQKPFQCRICMRNFSR   61 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHH------------------------------HCCCCEECTTTCCEESC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhh------------------------------CCCCCeECCCCCchhCC
Confidence            445688999997  5999999999999999998                              46789999999999999


Q ss_pred             hhhHHhhhhhcc
Q 024499          170 GQALGGHKRCHY  181 (267)
Q Consensus       170 ~~~L~~H~r~H~  181 (267)
                      ...|..|+++|+
T Consensus        62 ~~~l~~H~~~Ht   73 (73)
T 1f2i_G           62 SDHLTTHIRTHT   73 (73)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHHhcC
Confidence            999999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.38  E-value=1.3e-14  Score=111.94  Aligned_cols=83  Identities=10%  Similarity=0.013  Sum_probs=73.2

Q ss_pred             CCcceeccccccccC------ChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCC
Q 024499           96 LKLSYKCSVCNKAFS------SYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFP  168 (267)
Q Consensus        96 g~~p~~C~~C~k~F~------~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~  168 (267)
                      .++.|.|++|.+.|.      ....|..|+ .|+++++ .|..|++.|....   .|..|+++|  +++|.|.+|++.|.
T Consensus        38 ~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~---~l~~H~~~H--~~~~~C~~C~k~f~  111 (129)
T 2wbt_A           38 EQKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSV---SLKQHIRYT--EHTKVCPVCKKEFT  111 (129)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHH---HHHHHHHHT--CCCCBCTTTCCBCS
T ss_pred             hhCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHh---HHHHHHHHC--CCCCCCCCCCcccC
Confidence            456788999888776      667777777 5888888 9999999999999   999999999  89999999999999


Q ss_pred             ChhhHHhhhhhcccCc
Q 024499          169 TGQALGGHKRCHYEGG  184 (267)
Q Consensus       169 ~~~~L~~H~r~H~~~~  184 (267)
                      +...|..|+++|++.-
T Consensus       112 ~~~~l~~H~~~h~~~~  127 (129)
T 2wbt_A          112 STDSALDHVCKKHNIC  127 (129)
T ss_dssp             SHHHHHHHHHHTTCCC
T ss_pred             CHHHHHHHHHHHCCcc
Confidence            9999999999998763

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.28  E-value=6.5e-12  Score=86.76  Aligned_cols=58  Identities=31%  Similarity=0.599  Sum_probs=52.5

Q ss_pred             CCCCCcceeccc--cccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCcc--ccccCC
Q 024499           93 PPSLKLSYKCSV--CNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSI--CHKSFP  168 (267)
Q Consensus        93 ~~~g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C~k~F~  168 (267)
                      .....++|.|.+  |++.|.....|..|+++|                              +++++|+|.+  |++.|.
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H------------------------------~~~~~~~C~~~~C~k~f~   60 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTH------------------------------TGEKPFSCSWKGCERRFA   60 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHH------------------------------SSSCSEECCCTTCCCEES
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhc------------------------------CCCCCccCCCCCCCcccC
Confidence            345788999998  999999999999999998                              4678999975  999999


Q ss_pred             ChhhHHhhhhhc
Q 024499          169 TGQALGGHKRCH  180 (267)
Q Consensus       169 ~~~~L~~H~r~H  180 (267)
                      +...|..|+++|
T Consensus        61 ~~~~l~~H~~~H   72 (72)
T 2epa_A           61 RSDELSRHRRTH   72 (72)
T ss_dssp             SHHHHHHHTTTC
T ss_pred             CHHHHHhHhhcC
Confidence            999999999987

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=2.3e-12  Score=87.83  Aligned_cols=59  Identities=20%  Similarity=0.380  Sum_probs=52.5

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCc-cccccCCChhhH
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECS-ICHKSFPTGQAL  173 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~-~C~k~F~~~~~L  173 (267)
                      -++++|.|.+|++.|. ...|..|+++ .                              +++||.|. +|++.|.....|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~------------------------------~~~p~~C~~~C~k~f~~~~~L   53 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-C------------------------------PRLPVACPNQCGVGTVAREDL   53 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-C------------------------------SSSEEECTTCCSCCEEETTTH
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-c------------------------------CCcCccCCcccCcccccHHHH
Confidence            4788999999999999 9999999875 3                              57899999 999999999999


Q ss_pred             HhhhhhcccCcC
Q 024499          174 GGHKRCHYEGGI  185 (267)
Q Consensus       174 ~~H~r~H~~~~~  185 (267)
                      ..|+++|....+
T Consensus        54 ~~H~~~hc~~~~   65 (66)
T 2eod_A           54 PGHLKDSCNTAL   65 (66)
T ss_dssp             HHHHHTTSSSCC
T ss_pred             HHHHHhhcccCc
Confidence            999999976643

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=7.4e-12  Score=90.97  Aligned_cols=70  Identities=24%  Similarity=0.273  Sum_probs=57.2

Q ss_pred             CcceeccccccccCChHHHHHhHHh-hCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHH
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKAS-HRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALG  174 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~-H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~  174 (267)
                      ...|.|.+|++.|.....|..|+++ |.++++ .+.                       .-++|.|.+|++.|.+...|.
T Consensus        23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~-----------------------~c~~~~C~~C~k~f~~~~~L~   79 (95)
T 2ej4_A           23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNH-----------------------VCYWEECPREGKSFKAKYKLV   79 (95)
T ss_dssp             CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCC-----------------------CCCCTTCSSTTCCCSSHHHHH
T ss_pred             cCCCcccccccccCCHHHHHHHHHHhccCCCCCCcc-----------------------ceeccCCCCCCcccCCHHHHH
Confidence            4458899999999999999999998 765433 110                       013489999999999999999


Q ss_pred             hhhhhcccCcCCCCC
Q 024499          175 GHKRCHYEGGINNNN  189 (267)
Q Consensus       175 ~H~r~H~~~~~~~~~  189 (267)
                      .|+++|++++++.|.
T Consensus        80 ~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           80 NHIRVHTGEKSGPSS   94 (95)
T ss_dssp             HHHHHHHTCCCCSSC
T ss_pred             HHHHhcCCCCCCCCC
Confidence            999999999998874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.5e-13  Score=92.41  Aligned_cols=34  Identities=18%  Similarity=0.192  Sum_probs=18.5

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      +++|.|.+|++.|.+...|..|+++|.+++++.|
T Consensus        37 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C   70 (73)
T 2ctu_A           37 RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGP   70 (73)
T ss_dssp             SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSC
T ss_pred             CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCC
Confidence            3455555555555555555555555555555544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=1.1e-12  Score=96.78  Aligned_cols=33  Identities=24%  Similarity=0.400  Sum_probs=30.4

Q ss_pred             CC-CcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           95 SL-KLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        95 ~g-~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      .+ +++|+|.+|++.|.....|..|+++|+++++
T Consensus        49 ~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A           49 QKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             HHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45 8899999999999999999999999988776

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=3.4e-13  Score=101.82  Aligned_cols=85  Identities=8%  Similarity=-0.101  Sum_probs=76.3

Q ss_pred             hHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCccccccc--CCCCCcee-CccccccC--CChhhHHhhhhhcccCcC
Q 024499          112 YQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASS--GSGGRTHE-CSICHKSF--PTGQALGGHKRCHYEGGI  185 (267)
Q Consensus       112 ~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~--h~g~kp~~-C~~C~k~F--~~~~~L~~H~r~H~~~~~  185 (267)
                      ...|..|+++|.++++ .|..|++.|....   .|..|+++  |.+++++. |.+|++.|  .....|..|+++|.++++
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~---~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~   80 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLV---ELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKV   80 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHH---HHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSS
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHH---HHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcc
Confidence            4568899999999999 9999999999999   99999998  88888765 99999999  999999999999999999


Q ss_pred             CCCCCCCCCCCCCC
Q 024499          186 NNNNNNSSSNNNKS  199 (267)
Q Consensus       186 ~~~~~~~ss~~~~~  199 (267)
                      +.|..|...+....
T Consensus        81 ~~C~~C~k~f~~~~   94 (115)
T 2dmi_A           81 LKCMYCGHSFESLQ   94 (115)
T ss_dssp             CBCSSSCCBCSSHH
T ss_pred             eECCCCCCccCCHH
Confidence            99999988777643

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=4.1e-12  Score=93.62  Aligned_cols=61  Identities=11%  Similarity=0.066  Sum_probs=55.4

Q ss_pred             CCcceecccccccc-CChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccc-cccCCCCCceeC
Q 024499           96 LKLSYKCSVCNKAF-SSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSAT-ASSGSGGRTHEC  160 (267)
Q Consensus        96 g~~p~~C~~C~k~F-~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H-~~~h~g~kp~~C  160 (267)
                      ++++|.|++|++.| .....|..|+++| ++++ .|..|++.|....   .|..| +++|+++..|.+
T Consensus        31 ~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~---~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           31 DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLA---GMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             HTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHH---HHHHHHHHHTCCCSSCSC
T ss_pred             CCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHH---HHHHHhHHhcCCCCCCCC
Confidence            57789999999999 9999999999999 8888 9999999999999   99999 999987655554

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=2.6e-11  Score=79.20  Aligned_cols=48  Identities=29%  Similarity=0.564  Sum_probs=41.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHH-hhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKA-SHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPT  169 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~-~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~  169 (267)
                      ..+.++++|.|.+|++.|.....|..|++ +|                              .++++|+|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H------------------------------~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH------------------------------TSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTS------------------------------CCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhc------------------------------CCCCCccCCCCCCCCCC
Confidence            34568899999999999999999999987 77                              46788899999998875

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.4e-12  Score=97.37  Aligned_cols=53  Identities=11%  Similarity=-0.012  Sum_probs=44.6

Q ss_pred             CCCCCceeCccccccCCChhhHHhhhh-hc---ccCcCCCCCCCCCCCCCCCCCCCC
Q 024499          152 GSGGRTHECSICHKSFPTGQALGGHKR-CH---YEGGINNNNNNSSSNNNKSNNNSD  204 (267)
Q Consensus       152 h~g~kp~~C~~C~k~F~~~~~L~~H~r-~H---~~~~~~~~~~~~ss~~~~~~~~~~  204 (267)
                      -+|++||.|.+|++.|.+...|..|++ +|   .+++++.|..|...+.........
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H   69 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEH   69 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTH
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHH
Confidence            478999999999999999999999998 59   568899999998887775544333

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.3e-12  Score=88.80  Aligned_cols=62  Identities=18%  Similarity=0.144  Sum_probs=56.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccc
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSIC  163 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C  163 (267)
                      ..+.++++|.|.+|++.|.....|..       +++ .|..|++.|....   .|..|+++|+++++|+|.+|
T Consensus        11 ~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~---~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           11 KIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEA---ALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCC---SSCCCSSCCCCCCCSSCCCC
T ss_pred             HHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHH---HHHHHHHhhcCCCCCCCCCC
Confidence            56778999999999999999988876       445 8999999999999   99999999999999999998

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.17  E-value=1.1e-11  Score=80.98  Aligned_cols=51  Identities=14%  Similarity=0.160  Sum_probs=46.3

Q ss_pred             CCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCC
Q 024499          133 PNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGIN  186 (267)
Q Consensus       133 ~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~  186 (267)
                      ++.|....   .|..|+++|+++++|.|.+|++.|.+...|..|+++|++++++
T Consensus         3 ~k~~~~~~---~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            3 AKRAKHPP---GTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCCSCSS---CCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             ccccCCCc---chhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45677777   8999999999999999999999999999999999999998875

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.16  E-value=6.6e-12  Score=93.14  Aligned_cols=63  Identities=17%  Similarity=0.293  Sum_probs=59.2

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeC
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHEC  160 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C  160 (267)
                      .++++|.|.+|++.|.....|..|+++|.++++ .|..|++.|....   .|..|+++|.++++|.+
T Consensus        41 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           41 TDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSR---TLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHH---HHHHHHHHTTSCCCCCC
T ss_pred             CCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHH---HHHHHHHHhCCCCCCcC
Confidence            357789999999999999999999999999988 9999999999999   99999999999999875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=7.1e-12  Score=87.90  Aligned_cols=69  Identities=13%  Similarity=0.128  Sum_probs=61.3

Q ss_pred             CCCC-CCC--CCCCCCCCCCCCCCcccccc-cCCCCCceeCcc--ccccCCChhhHHhhhhhcccCcCCCCCCCCCCC
Q 024499          124 KNAA-DAS--ASPNAAAASDVTPPPSATAS-SGSGGRTHECSI--CHKSFPTGQALGGHKRCHYEGGINNNNNNSSSN  195 (267)
Q Consensus       124 ~~k~-~c~--~C~~~f~~~~~~~~L~~H~~-~h~g~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~  195 (267)
                      ++++ .|.  .|++.|....   .|..|++ +|.++++|+|.+  |++.|.+...|..|+++|.+++++.|..+..++
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~---~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQ---YLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHH---HHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHH---HHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3444 455  5999999999   9999999 799999999999  999999999999999999999999998877654

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=2.3e-11  Score=76.57  Aligned_cols=45  Identities=29%  Similarity=0.479  Sum_probs=41.9

Q ss_pred             ccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          146 SATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       146 ~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      ++|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A            1 GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            368999999999999999999999999999999999999998854

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.15  E-value=3.1e-11  Score=75.78  Aligned_cols=44  Identities=30%  Similarity=0.440  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.14  E-value=3.7e-11  Score=75.49  Aligned_cols=44  Identities=25%  Similarity=0.461  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            58899999999999999999999999999999999999998854

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.1e-11  Score=75.84  Aligned_cols=44  Identities=34%  Similarity=0.604  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            68999999999999999999999999999999999999998854

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.7e-11  Score=75.48  Aligned_cols=44  Identities=25%  Similarity=0.477  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.14  E-value=3.2e-11  Score=75.86  Aligned_cols=44  Identities=30%  Similarity=0.502  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.9e-11  Score=75.96  Aligned_cols=44  Identities=25%  Similarity=0.450  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.7e-11  Score=75.43  Aligned_cols=44  Identities=34%  Similarity=0.556  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.2e-11  Score=74.10  Aligned_cols=42  Identities=21%  Similarity=0.411  Sum_probs=39.4

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999999999999999999999999999988763

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.14  E-value=9.3e-12  Score=90.55  Aligned_cols=74  Identities=12%  Similarity=0.174  Sum_probs=67.1

Q ss_pred             hCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCCC
Q 024499          122 HRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNK  198 (267)
Q Consensus       122 H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~~  198 (267)
                      +.++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.....|..|+++|.+++++.|..|...+...
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   77 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKD---KLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNS   77 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHH---HHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSH
T ss_pred             CCCCcCeECCCCCCccCCHH---HHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCH
Confidence            345566 8999999999998   9999999999999999999999999999999999999999999999888766553

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.3e-11  Score=75.75  Aligned_cols=44  Identities=34%  Similarity=0.554  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.6e-11  Score=75.55  Aligned_cols=44  Identities=30%  Similarity=0.514  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.13  E-value=3.4e-11  Score=75.68  Aligned_cols=44  Identities=25%  Similarity=0.501  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.6e-11  Score=75.57  Aligned_cols=44  Identities=25%  Similarity=0.459  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68999999999999999999999999999999999999998854

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.13  E-value=3.5e-11  Score=73.99  Aligned_cols=41  Identities=32%  Similarity=0.443  Sum_probs=39.0

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            67889999999999999999999999999999999998876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4e-11  Score=75.42  Aligned_cols=44  Identities=30%  Similarity=0.584  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998854

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.9e-11  Score=75.33  Aligned_cols=44  Identities=30%  Similarity=0.484  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.6e-11  Score=73.88  Aligned_cols=42  Identities=26%  Similarity=0.468  Sum_probs=39.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488899999999999999999999999999999999988764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.2e-11  Score=75.24  Aligned_cols=44  Identities=27%  Similarity=0.501  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.3e-11  Score=75.72  Aligned_cols=44  Identities=27%  Similarity=0.503  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4e-11  Score=75.26  Aligned_cols=44  Identities=27%  Similarity=0.474  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.2e-11  Score=74.62  Aligned_cols=42  Identities=33%  Similarity=0.424  Sum_probs=39.7

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            588999999999999999999999999999999999998875

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.3e-11  Score=74.82  Aligned_cols=44  Identities=30%  Similarity=0.544  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.6e-11  Score=74.98  Aligned_cols=44  Identities=32%  Similarity=0.549  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.8e-11  Score=75.46  Aligned_cols=44  Identities=30%  Similarity=0.476  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.6e-11  Score=75.53  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=5e-12  Score=94.54  Aligned_cols=74  Identities=16%  Similarity=0.140  Sum_probs=68.2

Q ss_pred             hhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCCC
Q 024499          121 SHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNK  198 (267)
Q Consensus       121 ~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~~  198 (267)
                      .|+++++ .| .|++.|....   .|..|+++|.++++|.|.+|++.|.+...|..|+++|.+++++.|..|...+...
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   78 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKS---QRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWR   78 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHH---HHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCH
T ss_pred             CCCCCCCEec-cCCCccCCHH---HHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCH
Confidence            5778888 88 8999999999   9999999999999999999999999999999999999999999999888766653

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=6e-11  Score=74.57  Aligned_cols=44  Identities=25%  Similarity=0.412  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998854

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4e-11  Score=74.57  Aligned_cols=43  Identities=28%  Similarity=0.446  Sum_probs=40.5

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++++.+..
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6889999999999999999999999999999999999998854

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.9e-11  Score=75.29  Aligned_cols=44  Identities=34%  Similarity=0.554  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.8e-11  Score=74.96  Aligned_cols=44  Identities=25%  Similarity=0.451  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=4.5e-11  Score=75.16  Aligned_cols=44  Identities=27%  Similarity=0.523  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998864

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.3e-11  Score=75.17  Aligned_cols=44  Identities=27%  Similarity=0.493  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.7e-11  Score=74.94  Aligned_cols=44  Identities=34%  Similarity=0.536  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.9e-11  Score=75.40  Aligned_cols=44  Identities=30%  Similarity=0.587  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.4e-11  Score=75.12  Aligned_cols=44  Identities=25%  Similarity=0.444  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.3e-11  Score=75.09  Aligned_cols=44  Identities=27%  Similarity=0.523  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999988854

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.4e-11  Score=75.15  Aligned_cols=44  Identities=30%  Similarity=0.480  Sum_probs=41.5

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.2e-11  Score=74.35  Aligned_cols=42  Identities=33%  Similarity=0.540  Sum_probs=39.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            688999999999999999999999999999999999998876

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.4e-11  Score=74.70  Aligned_cols=44  Identities=30%  Similarity=0.591  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.2e-11  Score=74.51  Aligned_cols=42  Identities=29%  Similarity=0.503  Sum_probs=39.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            688999999999999999999999999999999999998876

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.5e-11  Score=75.16  Aligned_cols=44  Identities=34%  Similarity=0.512  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.2e-11  Score=74.73  Aligned_cols=44  Identities=30%  Similarity=0.475  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999988854

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.11  E-value=5.3e-11  Score=74.68  Aligned_cols=44  Identities=30%  Similarity=0.477  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998854

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.1e-11  Score=75.20  Aligned_cols=44  Identities=27%  Similarity=0.505  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.11  E-value=2e-11  Score=88.61  Aligned_cols=72  Identities=13%  Similarity=0.113  Sum_probs=65.6

Q ss_pred             CCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhhcccC--cCCCCCCCCCCCCCC
Q 024499          124 KNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG--GINNNNNNSSSNNNK  198 (267)
Q Consensus       124 ~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~--~~~~~~~~~ss~~~~  198 (267)
                      ++++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.+...|..|+++|.++  +++.|..|...+...
T Consensus         4 ~~~~~~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~   78 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVY---HLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRP   78 (95)
T ss_dssp             CCSCEECSSSCCEESSSH---HHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSH
T ss_pred             CCCCeECCCCCCccCChH---HHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCH
Confidence            4455 8999999999999   9999999999999999999999999999999999999987  899999988776654

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.11  E-value=5.2e-11  Score=74.88  Aligned_cols=44  Identities=27%  Similarity=0.497  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            48889999999999999999999999999999999999998864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5e-11  Score=74.00  Aligned_cols=42  Identities=29%  Similarity=0.403  Sum_probs=39.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            588999999999999999999999999999999999998876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.11  E-value=4.4e-11  Score=75.22  Aligned_cols=44  Identities=32%  Similarity=0.575  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.5e-11  Score=74.63  Aligned_cols=44  Identities=34%  Similarity=0.511  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.9e-11  Score=74.93  Aligned_cols=44  Identities=30%  Similarity=0.545  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998854

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.5e-11  Score=74.70  Aligned_cols=44  Identities=27%  Similarity=0.519  Sum_probs=41.0

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.7e-11  Score=74.63  Aligned_cols=44  Identities=25%  Similarity=0.453  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=5e-11  Score=74.94  Aligned_cols=44  Identities=34%  Similarity=0.530  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.3e-11  Score=74.39  Aligned_cols=42  Identities=29%  Similarity=0.486  Sum_probs=39.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            588999999999999999999999999999999999998876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.1e-11  Score=74.82  Aligned_cols=44  Identities=32%  Similarity=0.505  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998854

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=6.4e-11  Score=74.38  Aligned_cols=44  Identities=25%  Similarity=0.416  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998854

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6e-11  Score=74.43  Aligned_cols=44  Identities=30%  Similarity=0.485  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            58899999999999999999999999999999999999998853

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=6e-11  Score=73.78  Aligned_cols=42  Identities=26%  Similarity=0.424  Sum_probs=40.0

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            688999999999999999999999999999999999998876

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.1e-11  Score=74.45  Aligned_cols=43  Identities=35%  Similarity=0.535  Sum_probs=40.7

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999998875

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.6e-11  Score=74.57  Aligned_cols=44  Identities=34%  Similarity=0.546  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.9e-11  Score=74.28  Aligned_cols=44  Identities=30%  Similarity=0.431  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.6e-11  Score=74.64  Aligned_cols=44  Identities=25%  Similarity=0.480  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4e-11  Score=75.40  Aligned_cols=44  Identities=27%  Similarity=0.579  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.4e-11  Score=74.73  Aligned_cols=44  Identities=27%  Similarity=0.570  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.10  E-value=6.9e-11  Score=74.30  Aligned_cols=44  Identities=32%  Similarity=0.454  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999999999999999999998854

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.5e-11  Score=74.35  Aligned_cols=44  Identities=27%  Similarity=0.402  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.5e-11  Score=74.60  Aligned_cols=44  Identities=25%  Similarity=0.468  Sum_probs=41.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999998853

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=7.3e-11  Score=74.16  Aligned_cols=44  Identities=27%  Similarity=0.536  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.1e-11  Score=74.89  Aligned_cols=43  Identities=28%  Similarity=0.480  Sum_probs=40.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999999999874

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=6.6e-11  Score=74.23  Aligned_cols=44  Identities=27%  Similarity=0.499  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.8e-11  Score=72.77  Aligned_cols=41  Identities=29%  Similarity=0.513  Sum_probs=38.4

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            78889999999999999999999999999999999988764

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=74.76  Aligned_cols=43  Identities=26%  Similarity=0.428  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.1e-11  Score=73.25  Aligned_cols=41  Identities=22%  Similarity=0.404  Sum_probs=38.6

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      |+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            78899999999999999999999999999999999988764

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.7e-11  Score=74.06  Aligned_cols=43  Identities=35%  Similarity=0.529  Sum_probs=40.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999999998874

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.5e-11  Score=74.34  Aligned_cols=43  Identities=23%  Similarity=0.417  Sum_probs=40.3

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999999988763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.4e-11  Score=74.13  Aligned_cols=44  Identities=27%  Similarity=0.533  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=74.76  Aligned_cols=44  Identities=30%  Similarity=0.529  Sum_probs=41.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998864

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.3e-11  Score=73.97  Aligned_cols=44  Identities=25%  Similarity=0.497  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998853

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=1.2e-10  Score=73.94  Aligned_cols=43  Identities=26%  Similarity=0.424  Sum_probs=37.2

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccc
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHK  165 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k  165 (267)
                      .+.++++|.|.+|++.|.....|..|+++|                              +++++|.|.+|+|
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H------------------------------~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSH------------------------------SGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGS------------------------------CSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhc------------------------------CCCCCccCCCCCC
Confidence            456789999999999999999999999988                              4667888888875

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=8.1e-11  Score=73.89  Aligned_cols=44  Identities=25%  Similarity=0.367  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998854

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.6e-11  Score=74.39  Aligned_cols=43  Identities=35%  Similarity=0.584  Sum_probs=40.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      +|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999885

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=8.3e-11  Score=73.84  Aligned_cols=44  Identities=30%  Similarity=0.483  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998854

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.2e-11  Score=73.92  Aligned_cols=44  Identities=30%  Similarity=0.505  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999998853

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=1.1e-10  Score=73.33  Aligned_cols=44  Identities=30%  Similarity=0.597  Sum_probs=40.7

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998853

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.8e-11  Score=74.11  Aligned_cols=44  Identities=25%  Similarity=0.456  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999999998864

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.2e-11  Score=74.14  Aligned_cols=44  Identities=23%  Similarity=0.456  Sum_probs=41.2

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58889999999999999999999999999999999999998854

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.2e-11  Score=73.79  Aligned_cols=44  Identities=27%  Similarity=0.492  Sum_probs=41.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999998853

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.06  E-value=8.3e-11  Score=72.22  Aligned_cols=41  Identities=27%  Similarity=0.464  Sum_probs=38.4

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      |+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            78889999999999999999999999999999999988764

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=8.8e-11  Score=73.65  Aligned_cols=43  Identities=28%  Similarity=0.509  Sum_probs=40.8

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      +|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999998874

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=9.8e-11  Score=73.58  Aligned_cols=44  Identities=27%  Similarity=0.488  Sum_probs=41.0

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            47889999999999999999999999999999999999998854

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.4e-10  Score=72.97  Aligned_cols=44  Identities=30%  Similarity=0.447  Sum_probs=41.0

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhh-hcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKR-CHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r-~H~~~~~~~~~~  190 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|++ +|.+++++.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            58899999999999999999999999999999 999999988854

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=1.2e-10  Score=73.16  Aligned_cols=43  Identities=26%  Similarity=0.478  Sum_probs=40.1

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhccc-CcCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYE-GGINNNN  189 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~-~~~~~~~  189 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+ ++++.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            588899999999999999999999999999999999 8888774

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.6e-10  Score=71.79  Aligned_cols=42  Identities=29%  Similarity=0.391  Sum_probs=39.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      .|+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            378889999999999999999999999999999999998876

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.02  E-value=4.2e-11  Score=85.86  Aligned_cols=59  Identities=17%  Similarity=0.262  Sum_probs=53.5

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCc
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRT  157 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp  157 (267)
                      ++++|.|.+|++.|.....|..|+++|.++++ .|..|++.|....   .|..|+++|+++|.
T Consensus        31 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~---~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSD---ERKRHTKIHLRQKD   90 (90)
T ss_dssp             CCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHH---HHHHHHGGGGC---
T ss_pred             CCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHH---HHHHHHHHhcccCC
Confidence            56789999999999999999999999999988 9999999999999   99999999998863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=2.7e-10  Score=71.13  Aligned_cols=32  Identities=28%  Similarity=0.466  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~   34 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHD   34 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHS
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHcc
Confidence            35678999999999999999999999999994

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.00  E-value=1.9e-11  Score=85.97  Aligned_cols=67  Identities=16%  Similarity=0.143  Sum_probs=61.9

Q ss_pred             CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          128 DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       128 ~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      .|..|++.|....   .|..|+++|.++++|.|.+|++.|.....|..|+++|.+++++.|..+...+..
T Consensus         3 ~C~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   69 (82)
T 2kmk_A            3 DCKICGKSFKRSS---TLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQ   69 (82)
T ss_dssp             ECSSSCCEESSHH---HHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESS
T ss_pred             cCCCCcccccCch---hHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCC
Confidence            4889999999998   999999999999999999999999999999999999999999999888765543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.98  E-value=2.7e-10  Score=67.85  Aligned_cols=37  Identities=22%  Similarity=0.477  Sum_probs=34.4

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      .|+++|+++++|+|.+|++.|.+...|..|+++|.++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3788999999999999999999999999999999864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=3.5e-10  Score=71.04  Aligned_cols=43  Identities=33%  Similarity=0.496  Sum_probs=39.7

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      ++++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            4678899999999999999999999999999999999998853

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=4.7e-10  Score=69.60  Aligned_cols=32  Identities=38%  Similarity=0.519  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   34 (44)
T 2emx_A            3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA   34 (44)
T ss_dssp             CCCSSCCCEECSSSSCEESSHHHHHHHHHHHT
T ss_pred             CCcCCCcCccCCCCCcccCCHHHHHHHHHHhC
Confidence            35678999999999999999999999999994

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=5.9e-10  Score=69.84  Aligned_cols=32  Identities=31%  Similarity=0.514  Sum_probs=29.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emy_A            5 SSGTGENPYECHECGKAFSRKYQLISHQRTHA   36 (46)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             CCCCCCcCcCCCCCCcccCcHHHHHHHHHHcC
Confidence            45678999999999999999999999999994

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.4e-10  Score=70.43  Aligned_cols=32  Identities=31%  Similarity=0.602  Sum_probs=28.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2ytn_A            5 SSGTGKKPYKCNECGKVFTQNSHLARHRGIHT   36 (46)
T ss_dssp             CCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTS
T ss_pred             cCCCCCcCeECCCCCCeeCCHHHHHHHhhhcC
Confidence            45678999999999999999999999998884

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.97  E-value=5.2e-10  Score=70.15  Aligned_cols=32  Identities=34%  Similarity=0.461  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2el6_A            5 SSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT   36 (46)
T ss_dssp             CSSCCCCSEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999884

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.8e-10  Score=69.55  Aligned_cols=32  Identities=38%  Similarity=0.583  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytd_A            5 SSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT   36 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSHHHHHHHHHHHT
T ss_pred             cccCCCcCeECCCCCCeeCChHHHHHHHHHcC
Confidence            45678999999999999999999999999994

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.6e-10  Score=70.33  Aligned_cols=32  Identities=28%  Similarity=0.517  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eq0_A            5 SSGTGEKPYKCHECGKVFRRNSHLARHQLIHT   36 (46)
T ss_dssp             CCTTCCCCEECTTTCCEESSHHHHHHHHTTTC
T ss_pred             cCCCCCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999998884

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5e-10  Score=70.09  Aligned_cols=32  Identities=28%  Similarity=0.571  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoe_A            5 SSGTGEKPYKCNECGKVFTQNSHLANHQRIHT   36 (46)
T ss_dssp             SCCCCCCSSEETTTTEECSSHHHHHHHHGGGS
T ss_pred             CCCCCCCCeECCCcChhhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999884

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=5.6e-10  Score=69.93  Aligned_cols=32  Identities=41%  Similarity=0.648  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eml_A            5 SSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS   36 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHGGGS
T ss_pred             CCcCCCCCeeCCCcCCccCCHHHHHHHHHHhc
Confidence            45678999999999999999999999999884

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.5e-10  Score=70.47  Aligned_cols=32  Identities=25%  Similarity=0.486  Sum_probs=28.6

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emf_A            5 SSGTGGKHFECTECGKAFTRKSTLSMHQKIHT   36 (46)
T ss_dssp             SSSSSSCCEECSSSCCEESCHHHHHHHGGGTS
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.9e-10  Score=71.01  Aligned_cols=42  Identities=33%  Similarity=0.545  Sum_probs=39.0

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      +.++|+++++|+|.+|++.|.+...|..|+++|.+++++.|.
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            567889999999999999999999999999999999998874

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.97  E-value=6.2e-10  Score=69.65  Aligned_cols=32  Identities=34%  Similarity=0.446  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2el4_A            5 SSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT   36 (46)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHGGGSS
T ss_pred             cCCCCCCceECCCCCchhCCHHHHHHHHHHhC
Confidence            45678999999999999999999999998884

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=4.2e-10  Score=70.53  Aligned_cols=43  Identities=35%  Similarity=0.651  Sum_probs=39.8

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      ++++|+++++|+|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         3 ~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4678899999999999999999999999999999999998864

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=6.5e-10  Score=69.56  Aligned_cols=32  Identities=25%  Similarity=0.367  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emm_A            5 SSGTGERPHKCNECGKSFIQSAHLIQHQRIHT   36 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             CCcCCCCCeeCCCCChhhCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999994

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=4.9e-10  Score=70.28  Aligned_cols=32  Identities=28%  Similarity=0.530  Sum_probs=28.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2elz_A            5 SSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM   36 (46)
T ss_dssp             SCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGG
T ss_pred             CCCCCCCCeeCcccCchhCCHHHHHHHHHhcC
Confidence            45678999999999999999999999999884

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.5e-10  Score=69.64  Aligned_cols=32  Identities=31%  Similarity=0.510  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytk_A            5 SSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT   36 (46)
T ss_dssp             CCSSSSCSEECSSSCCEESSHHHHHHHHHHHS
T ss_pred             ccCCCCCCEeCCcCCCccCCHHHHHHHHHHHC
Confidence            45678999999999999999999999999994

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.96  E-value=6.2e-10  Score=69.78  Aligned_cols=32  Identities=31%  Similarity=0.508  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emk_A            5 SSGTGEKPYECKECGKAFSQTTHLIQHQRVHT   36 (46)
T ss_dssp             CCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHS
T ss_pred             CccCCCCceECCCCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999994

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.96  E-value=5.1e-10  Score=70.13  Aligned_cols=32  Identities=31%  Similarity=0.561  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ema_A            5 SSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT   36 (46)
T ss_dssp             SSCTTSCCEECSSSCCEESSHHHHHHHHTGGG
T ss_pred             cCCCCCcCcCCCCCcchhCCHHHHHHHHHhcC
Confidence            45678999999999999999999999999884

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=5.3e-10  Score=70.05  Aligned_cols=32  Identities=28%  Similarity=0.483  Sum_probs=28.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em7_A            5 SSGTGEKPYKCEECGKGFICRRDLYTHHMVHT   36 (46)
T ss_dssp             CSSSCCCSEECSSSCCEESCHHHHHHHGGGGT
T ss_pred             CCCCCCcCccCCCccchhCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=5.3e-10  Score=70.06  Aligned_cols=32  Identities=28%  Similarity=0.519  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ene_A            5 SSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT   36 (46)
T ss_dssp             SSCCCSSSEECSSSCCEESSHHHHHHHHTTTC
T ss_pred             cCCCCCCCeECCCCCchhCChHHHHHHHhhcC
Confidence            45678999999999999999999999999884

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=6.1e-10  Score=69.76  Aligned_cols=32  Identities=28%  Similarity=0.470  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2enc_A            5 SSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS   36 (46)
T ss_dssp             SCCCCCCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCCCCCCcCCCCCCCcCCChHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.96  E-value=5.2e-10  Score=70.17  Aligned_cols=32  Identities=31%  Similarity=0.510  Sum_probs=28.5

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ely_A            5 SSGTGEKPFKCVECGKGFSRRSALNVHHKLHT   36 (46)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHS
T ss_pred             CCCCCCCCcccCccCcccCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999984

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6.1e-10  Score=69.75  Aligned_cols=32  Identities=28%  Similarity=0.570  Sum_probs=28.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep2_A            5 SSGTGEKPYECSICGKSFTKKSQLHVHQQIHT   36 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESSHHHHHHHHHTTS
T ss_pred             CCCCCCcCcCCCCCCcccCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6e-10  Score=69.79  Aligned_cols=32  Identities=31%  Similarity=0.573  Sum_probs=29.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en6_A            5 SSGSGEKPYGCNECGKTFSQKSILSAHQRTHT   36 (46)
T ss_dssp             CCCCSSCCEEETTTTEEESSHHHHHHHHHHHS
T ss_pred             CccCCCcCeECCCCCcccCchHHHHHHHHHcC
Confidence            45778999999999999999999999999994

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.4e-10  Score=70.02  Aligned_cols=32  Identities=28%  Similarity=0.491  Sum_probs=28.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2epz_A            5 SSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT   36 (46)
T ss_dssp             SSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTT
T ss_pred             CCcCCCCCeECCCCCceeCCHHHHHHHHHHhC
Confidence            45678999999999999999999999998884

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5.7e-10  Score=69.82  Aligned_cols=32  Identities=28%  Similarity=0.454  Sum_probs=28.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eq4_A            5 SSGTGEKLYNCKECGKSFSRAPCLLKHERLHS   36 (46)
T ss_dssp             CCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCC
T ss_pred             ccCCCCCCeECCCCCCccCchHHHHHHHHhcC
Confidence            45678999999999999999999999999884

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=6.8e-10  Score=69.54  Aligned_cols=32  Identities=28%  Similarity=0.434  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yso_A            5 SSGSREKSHQCRECGEIFFQYVSLIEHQVLHM   36 (46)
T ss_dssp             CCSSCCCCEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             cccCCCCCEEccccChhhCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999994

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5e-10  Score=70.22  Aligned_cols=32  Identities=38%  Similarity=0.468  Sum_probs=28.5

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytq_A            5 SSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS   36 (46)
T ss_dssp             SCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTC
T ss_pred             cCcCCCCCcCCCccChhhCChHHHHHHHHHhC
Confidence            45678999999999999999999999998884

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.6e-10  Score=69.61  Aligned_cols=32  Identities=28%  Similarity=0.457  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytj_A            5 SSGTGEKPYICAECGKAFTIRSNLIKHQKIHT   36 (46)
T ss_dssp             CTTSSCCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             cCCCCCcCeECCCCChhhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999884

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=5e-10  Score=70.17  Aligned_cols=32  Identities=31%  Similarity=0.539  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2emh_A            5 SSGTGERPYICTVCGKAFTDRSNLIKHQKIHT   36 (46)
T ss_dssp             CSCSCCCSEECTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCcCCCCCCchhCCHHHHHHHHHhcC
Confidence            45678999999999999999999999999994

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.95  E-value=5.8e-10  Score=69.87  Aligned_cols=32  Identities=25%  Similarity=0.424  Sum_probs=28.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2em0_A            5 SSGMGEKTWKCRECDMCFSQASSLRLHQNVHV   36 (46)
T ss_dssp             CCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGS
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHcC
Confidence            45678999999999999999999999998884

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=6.6e-10  Score=69.60  Aligned_cols=32  Identities=34%  Similarity=0.603  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2emp_A            5 SSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT   36 (46)
T ss_dssp             SCSSCCCSEECSSSCCEESCHHHHHHHHHHHH
T ss_pred             cccCCCcCeECCCCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999994

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.94  E-value=7.3e-10  Score=69.31  Aligned_cols=32  Identities=25%  Similarity=0.442  Sum_probs=28.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em9_A            5 SSGTGEKPYNCKECGKSFRWASCLLKHQRVHS   36 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHGGGGT
T ss_pred             CCCCCCcCeECCccccccCChHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=8.4e-10  Score=69.04  Aligned_cols=32  Identities=31%  Similarity=0.466  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eme_A            5 SSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT   36 (46)
T ss_dssp             CTTCCCCSEECSSSCCEESSHHHHHHHHGGGC
T ss_pred             CCCCCCCCeECCCCChhhCCHHHHHHHHHhcC
Confidence            45678999999999999999999999999884

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.2e-10  Score=69.80  Aligned_cols=32  Identities=28%  Similarity=0.453  Sum_probs=29.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em8_A            5 SSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT   36 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCeECcccCchhCCHHHHHHHHHHHc
Confidence            45678999999999999999999999999994

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=9.4e-10  Score=68.80  Aligned_cols=32  Identities=31%  Similarity=0.499  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eov_A            5 SSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT   36 (46)
T ss_dssp             CCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHS
T ss_pred             CCCCCCCCccCCccChhhCCHHHHHHHHHhcC
Confidence            45678999999999999999999999999994

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=6.7e-10  Score=69.65  Aligned_cols=32  Identities=25%  Similarity=0.429  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em5_A            5 SSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT   36 (46)
T ss_dssp             CCCCCSCSEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCCeECCcCCCccCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.1e-10  Score=69.70  Aligned_cols=32  Identities=25%  Similarity=0.338  Sum_probs=28.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eop_A            5 SSGTGEKPHECRECGKSFSFNSQLIVHQRIHT   36 (46)
T ss_dssp             CSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTT
T ss_pred             cccCCCCCeeCCCCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999998884

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.1e-10  Score=69.47  Aligned_cols=32  Identities=28%  Similarity=0.500  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ysp_A            5 SSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT   36 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESCHHHHHHHHTTSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHhhC
Confidence            45678999999999999999999999999884

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7.3e-10  Score=69.45  Aligned_cols=32  Identities=28%  Similarity=0.391  Sum_probs=29.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2eoo_A            5 SSGSGERPYGCNECGKNFGRHSHLIEHLKRHF   36 (46)
T ss_dssp             CCCSCCCCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEccccCcccCCHHHHHHHHHHHc
Confidence            45678999999999999999999999999994

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7e-10  Score=69.40  Aligned_cols=32  Identities=28%  Similarity=0.387  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~   36 (46)
T 2epw_A            5 SSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV   36 (46)
T ss_dssp             CCCCCCCSEECSSSCCEESSSHHHHHHHHHCC
T ss_pred             ccCCCCCCeeCCCCCCccCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.8e-10  Score=69.55  Aligned_cols=32  Identities=22%  Similarity=0.478  Sum_probs=28.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytg_A            5 SSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT   36 (46)
T ss_dssp             CCCSSCCSEECTTTCCEESSSHHHHTTGGGGS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHcC
Confidence            45678999999999999999999999988884

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=6.4e-10  Score=69.65  Aligned_cols=32  Identities=25%  Similarity=0.564  Sum_probs=28.6

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2eoq_A            5 SSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT   36 (46)
T ss_dssp             CCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             CCCCCCCCcCCCcCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999884

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=5.2e-10  Score=70.20  Aligned_cols=32  Identities=28%  Similarity=0.491  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytm_A            5 SSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT   36 (46)
T ss_dssp             CCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHH
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999994

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=7e-10  Score=69.47  Aligned_cols=32  Identities=31%  Similarity=0.539  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT   36 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTS
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhC
Confidence            45678999999999999999999999999884

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=8.1e-10  Score=69.19  Aligned_cols=32  Identities=28%  Similarity=0.531  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en1_A            5 SSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT   36 (46)
T ss_dssp             TCCCCCCSEEETTTTEEESSHHHHHHHGGGGS
T ss_pred             cCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999884

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=7.6e-10  Score=69.26  Aligned_cols=32  Identities=31%  Similarity=0.383  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2en8_A            5 SSGSGEKSHTCDECGKNFCYISALRIHQRVHM   36 (46)
T ss_dssp             CCCCCCSSEECTTTCCEESSHHHHHHHHTTTC
T ss_pred             ccCCCCCCeECCCcCcccCCHHHHHHHHHHhC
Confidence            45678999999999999999999999998884

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.93  E-value=6.4e-11  Score=88.12  Aligned_cols=60  Identities=12%  Similarity=0.023  Sum_probs=56.5

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccc-cCCCCCceeCc
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATAS-SGSGGRTHECS  161 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~-~h~g~kp~~C~  161 (267)
                      ++|+|.+|++.|.....|..|++ |.++++ .|..|++.|....   .|..|++ +|.++++|.|.
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~---~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF---SIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH---HHHHHHHHTSCCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH---HHHHHHHHHcCCCCCCCCC
Confidence            57999999999999999999996 999988 9999999999999   9999997 99999999886

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=6.1e-10  Score=68.00  Aligned_cols=39  Identities=38%  Similarity=0.562  Sum_probs=36.2

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      ++|+++++|+|.+|++.|.+...|..|+++|.+++++.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            568999999999999999999999999999999988764

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=5.2e-10  Score=70.10  Aligned_cols=32  Identities=28%  Similarity=0.578  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2yu8_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRRVHT   36 (46)
T ss_dssp             CCCCCCSSEECSSSCCEESSSHHHHHHTHHHH
T ss_pred             cCCCCCCCeECCcCCchhCCHHHHHHHHHhcC
Confidence            45678999999999999999999999999994

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=4.8e-10  Score=70.32  Aligned_cols=43  Identities=30%  Similarity=0.434  Sum_probs=39.7

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .+++|+++++|.|.+|++.|.+...|..|+++|.+++++.|..
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3678899999999999999999999999999999999998864

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=7.9e-10  Score=69.16  Aligned_cols=32  Identities=34%  Similarity=0.587  Sum_probs=27.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytr_A            5 SSGTGEKPYKCNECGKAFSQTSKLARHQRIHT   36 (46)
T ss_dssp             CCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTT
T ss_pred             cCCCCCcCcCCCCCCCccCCHHHHHHHHHhcC
Confidence            45678999999999999999999999988883

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.92  E-value=3.1e-10  Score=76.36  Aligned_cols=53  Identities=23%  Similarity=0.465  Sum_probs=41.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      ..+.++++|+|.+|++.|.....|.   ++|                              +++++|.|.+|++.|....
T Consensus         7 ~~H~~~k~~~C~~C~k~F~~~~~l~---~~H------------------------------~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            7 RDSTNRASFKCPVCSSTFTDLEANQ---LFD------------------------------PMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             SSCCSSSEEECSSSCCEEEHHHHHH---HEE------------------------------TTTTEEBCSSSCCBCEECT
T ss_pred             HHcCCCCCccCCCCCchhccHHHhH---hhc------------------------------CCCCCEECCCCCCccccCc
Confidence            4567888999999999998877665   555                              5778888888888888877


Q ss_pred             hHHhhh
Q 024499          172 ALGGHK  177 (267)
Q Consensus       172 ~L~~H~  177 (267)
                      ++..|.
T Consensus        54 ~~~~~~   59 (62)
T 1vd4_A           54 SAMPKK   59 (62)
T ss_dssp             TCSCCC
T ss_pred             cccccc
Confidence            766543

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=9.4e-10  Score=68.88  Aligned_cols=32  Identities=28%  Similarity=0.524  Sum_probs=28.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ep3_A            5 SSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT   36 (46)
T ss_dssp             SSSSCCCSEECSSSCCEESSHHHHHHHHTTTT
T ss_pred             CCCCCCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999884

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=4.8e-10  Score=66.75  Aligned_cols=37  Identities=32%  Similarity=0.592  Sum_probs=33.8

Q ss_pred             cccCCCCCceeCccccccCCChhhHHhhhhhcccCcC
Q 024499          149 ASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGI  185 (267)
Q Consensus       149 ~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~  185 (267)
                      +++|+++++|+|.+|++.|.+...|..|+++|+++++
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3578999999999999999999999999999998753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.91  E-value=7e-11  Score=84.81  Aligned_cols=54  Identities=15%  Similarity=0.293  Sum_probs=50.9

Q ss_pred             CC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhhhccc
Q 024499          126 AA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       126 k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      ++ .|..|++.|....   .|..|+++|.++++|.|.+|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~---~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            2 KPFQCRICMRNFSRSD---HLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCEECTTTCCEESCHH---HHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCcCCCCCCccCCHH---HHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            44 7999999999999   999999999999999999999999999999999999884

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.3e-09  Score=68.36  Aligned_cols=32  Identities=31%  Similarity=0.489  Sum_probs=29.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2em2_A            5 SSGSGEKPFKCKECGKAFRQNIHLASHLRIHT   36 (46)
T ss_dssp             CSCCCCCSEECSSSCCEESSHHHHHHHHHHHC
T ss_pred             CCCCCCCCEECCcCCchhCCHHHHHHHHHHhC
Confidence            45678999999999999999999999999994

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-09  Score=68.32  Aligned_cols=32  Identities=31%  Similarity=0.431  Sum_probs=28.5

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHH-hhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKA-SHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~-~H~  123 (267)
                      ..+.++++|+|.+|++.|.....|..|++ +|.
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   37 (47)
T 2epx_A            5 SSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT   37 (47)
T ss_dssp             CCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTT
T ss_pred             cccCCCCCEECCccCchhCChHHHHHHhHhhcC
Confidence            55678999999999999999999999998 884

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=5.9e-10  Score=69.90  Aligned_cols=32  Identities=31%  Similarity=0.500  Sum_probs=29.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|+
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~   36 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHT   36 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHH
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcC
Confidence            45678999999999999999999999999994

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.87  E-value=1.3e-09  Score=67.36  Aligned_cols=40  Identities=20%  Similarity=0.280  Sum_probs=37.3

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      ++|+++++|.|.+|++.|.+...|..|+++|++++++.|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5688999999999999999999999999999999998874

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.85  E-value=1.4e-09  Score=67.81  Aligned_cols=42  Identities=21%  Similarity=0.369  Sum_probs=38.7

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNN  191 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~  191 (267)
                      .+|+++++|+|.+|++.|.+...|..|+++|++++++.+..+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~c   44 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSS   44 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCC
Confidence            467899999999999999999999999999999999988654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=98.85  E-value=6.2e-10  Score=74.68  Aligned_cols=45  Identities=20%  Similarity=0.370  Sum_probs=41.6

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCCCC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKS  199 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~~~  199 (267)
                      ||||+|.+||+.|.+...|..|+++|++++++.|..|..++...+
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~   46 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQS   46 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHH
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHH
Confidence            799999999999999999999999999999999999988776543

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.84  E-value=3.7e-10  Score=80.66  Aligned_cols=67  Identities=15%  Similarity=0.145  Sum_probs=61.1

Q ss_pred             CCCC--CCCCCCCCCCCCCcccccccCCCCCceeCc--cccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          128 DASA--SPNAAAASDVTPPPSATASSGSGGRTHECS--ICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       128 ~c~~--C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      .|..  |++.|....   .|..|+++|.++++|.|.  .|++.|.....|..|+++|.+++++.|..|...+..
T Consensus         7 ~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   77 (89)
T 2wbs_A            7 TCDYAGCGKTYTKSS---HLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSR   77 (89)
T ss_dssp             ECCSTTTCCEESSHH---HHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESS
T ss_pred             eCCCCCCCCcCCCHH---HHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCC
Confidence            6777  999999999   999999999999999997  599999999999999999999999999887765543

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.84  E-value=1.7e-09  Score=63.43  Aligned_cols=34  Identities=29%  Similarity=0.504  Sum_probs=31.8

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +|+++++|+|.+|++.|.+...|..|+++|.+++
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999875

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.84  E-value=4.1e-10  Score=86.44  Aligned_cols=57  Identities=14%  Similarity=0.174  Sum_probs=52.5

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGG  155 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~  155 (267)
                      +.++++|.|.+|++.|.....|..|+++|  +++ .|..|++.|....   .|..|+++|++.
T Consensus        69 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~---~l~~H~~~h~~~  126 (129)
T 2wbt_A           69 SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTD---SALDHVCKKHNI  126 (129)
T ss_dssp             HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHH---HHHHHHHHTTCC
T ss_pred             hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHH---HHHHHHHHHCCc
Confidence            44789999999999999999999999999  556 9999999999999   999999999876

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=3.8e-09  Score=66.12  Aligned_cols=34  Identities=29%  Similarity=0.504  Sum_probs=30.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2em4_A            5 SSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE   38 (46)
T ss_dssp             CCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4577899999999999999999999999999533

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.84  E-value=1.5e-09  Score=63.48  Aligned_cols=34  Identities=26%  Similarity=0.418  Sum_probs=31.7

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +|+++++|.|.+|++.|.+...|..|+++|.+++
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=2.3e-09  Score=67.54  Aligned_cols=44  Identities=25%  Similarity=0.477  Sum_probs=40.1

Q ss_pred             cccccCCCCCceeCc--cccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          147 ATASSGSGGRTHECS--ICHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|.++|+++++|+|.  +|++.|.+...|..|+++|.+++++.|..
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367789999999998  89999999999999999999999998854

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.83  E-value=2.8e-09  Score=65.81  Aligned_cols=33  Identities=21%  Similarity=0.324  Sum_probs=29.5

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   35 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHS   35 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCC
Confidence            456789999999999999999999999999953

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=3.4e-09  Score=66.01  Aligned_cols=33  Identities=21%  Similarity=0.438  Sum_probs=29.5

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTG   37 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSS
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCC
Confidence            456789999999999999999999999998853

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.81  E-value=4.6e-09  Score=65.71  Aligned_cols=34  Identities=24%  Similarity=0.475  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2emj_A            5 SSGTGEKPFECAECGKSFSISSQLATHQRIHTGE   38 (46)
T ss_dssp             CCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTS
T ss_pred             CCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999999543

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.8e-09  Score=65.62  Aligned_cols=33  Identities=30%  Similarity=0.462  Sum_probs=29.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2ytp_A            5 SSGTGERHYECSECGKAFARKSTLIMHQRIHTG   37 (46)
T ss_dssp             CSSCCCCCEECSSSCCEESSHHHHHHHHTTTSC
T ss_pred             cCcCCCCCeECCcCCcccCCHHHHHHHHHHhCC
Confidence            456789999999999999999999999998843

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.80  E-value=2.3e-09  Score=64.62  Aligned_cols=37  Identities=32%  Similarity=0.560  Sum_probs=33.8

Q ss_pred             CCCCCceeCccccccCCChhhHHhhhhhcccCcCCCC
Q 024499          152 GSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNN  188 (267)
Q Consensus       152 h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~  188 (267)
                      |+++++|.|.+|++.|.+...|..|+++|.+++++..
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5789999999999999999999999999999988764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=3.9e-09  Score=66.12  Aligned_cols=34  Identities=21%  Similarity=0.287  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGE   38 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCC
Confidence            4567899999999999999999999999999543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.6e-09  Score=65.58  Aligned_cols=34  Identities=32%  Similarity=0.579  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eow_A            5 SSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE   38 (46)
T ss_dssp             CCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCCeeccccCChhcCHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999999533

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=4.9e-09  Score=65.51  Aligned_cols=34  Identities=29%  Similarity=0.598  Sum_probs=30.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2em3_A            5 SSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE   38 (46)
T ss_dssp             CCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999999533

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.80  E-value=8.2e-10  Score=80.55  Aligned_cols=67  Identities=16%  Similarity=0.154  Sum_probs=61.3

Q ss_pred             CCCC--CCCCCCCCCCCCCcccccccCCCCCceeCc--cccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          128 DASA--SPNAAAASDVTPPPSATASSGSGGRTHECS--ICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       128 ~c~~--C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      .|..  |++.|....   .|..|+++|.++++|.|.  .|++.|.....|..|+++|.+++++.|..|...+..
T Consensus        17 ~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   87 (100)
T 2ebt_A           17 YCDYPGCTKVYTKSS---HLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSR   87 (100)
T ss_dssp             ECCSSSCCCEESCHH---HHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSS
T ss_pred             EcCCCCCCCcccCHH---HHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCC
Confidence            6775  999999999   999999999999999996  699999999999999999999999999988776554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=6.2e-09  Score=65.03  Aligned_cols=34  Identities=32%  Similarity=0.528  Sum_probs=30.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2emi_A            5 SSGTGERHYECSECGKAFIQKSTLSMHQRIHRGE   38 (46)
T ss_dssp             CSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSC
T ss_pred             cccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCC
Confidence            4567899999999999999999999999999543

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.4e-09  Score=65.73  Aligned_cols=33  Identities=27%  Similarity=0.514  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~   37 (46)
T 2enf_A            5 SSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTG   37 (46)
T ss_dssp             CCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTT
T ss_pred             cCCCCCcCeECCCCCcccCCHHHHHHHHHhhCC
Confidence            456789999999999999999999999998843

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.6e-09  Score=65.57  Aligned_cols=34  Identities=26%  Similarity=0.480  Sum_probs=29.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2ytf_A            5 SSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE   38 (46)
T ss_dssp             CSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSS
T ss_pred             CCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999988543

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=4.2e-09  Score=65.81  Aligned_cols=33  Identities=24%  Similarity=0.361  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2emg_A            5 SSGTGENPFICSECGKVFTHKTNLIIHQKIHTG   37 (46)
T ss_dssp             CCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSC
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHhCC
Confidence            456789999999999999999999999998843

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.79  E-value=2.7e-09  Score=74.42  Aligned_cols=55  Identities=22%  Similarity=0.327  Sum_probs=48.7

Q ss_pred             CcccccccCCCCCceeCccccccCCChhhHHhhhh-hcccC-cCCCCCCCCCCCCCC
Q 024499          144 PPSATASSGSGGRTHECSICHKSFPTGQALGGHKR-CHYEG-GINNNNNNSSSNNNK  198 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r-~H~~~-~~~~~~~~~ss~~~~  198 (267)
                      .|.+|+++|+++++|.|.+|++.|.+...|..|++ .|.++ +++.|..|...+...
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~   58 (77)
T 2ct1_A            2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK   58 (77)
T ss_dssp             CCCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSH
T ss_pred             CCCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCH
Confidence            67899999999999999999999999999999997 67775 799999888766543

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=5.2e-09  Score=63.70  Aligned_cols=35  Identities=26%  Similarity=0.425  Sum_probs=30.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   37 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSG   37 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCS
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999999885443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=5.3e-09  Score=65.29  Aligned_cols=34  Identities=24%  Similarity=0.452  Sum_probs=29.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2yts_A            5 SSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGE   38 (46)
T ss_dssp             CCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSC
T ss_pred             CCCCCCcCEECCCCChhhCChHHHHHHHHhcCCC
Confidence            4567899999999999999999999999988543

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6.7e-09  Score=65.34  Aligned_cols=32  Identities=25%  Similarity=0.473  Sum_probs=28.5

Q ss_pred             CCCCCCcceecc--ccccccCChHHHHHhHHhhC
Q 024499           92 EPPSLKLSYKCS--VCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        92 ~~~~g~~p~~C~--~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..+.++++|+|.  +|++.|.....|..|+++|+
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~   38 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS   38 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhC
Confidence            456789999998  89999999999999998884

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=3.5e-09  Score=66.30  Aligned_cols=33  Identities=33%  Similarity=0.542  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eon_A            5 SSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSG   37 (46)
T ss_dssp             SSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTS
T ss_pred             CCCCCCcccCCCCCCcccCcHHHHHHHHHhcCC
Confidence            456789999999999999999999999988843

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=7.1e-09  Score=64.69  Aligned_cols=34  Identities=26%  Similarity=0.510  Sum_probs=29.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2yrj_A            5 SSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE   38 (46)
T ss_dssp             CCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999988533

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=5.2e-09  Score=65.46  Aligned_cols=34  Identities=26%  Similarity=0.471  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2en9_A            5 SSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGE   38 (46)
T ss_dssp             SSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSS
T ss_pred             CCCCCCCCEECCccCcccCCHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999999543

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5e-09  Score=65.41  Aligned_cols=34  Identities=26%  Similarity=0.458  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eor_A            5 SSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE   38 (46)
T ss_dssp             SSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSC
T ss_pred             cCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999999543

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.77  E-value=6.5e-09  Score=63.55  Aligned_cols=34  Identities=32%  Similarity=0.525  Sum_probs=29.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (42)
T 2el5_A            3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGE   36 (42)
T ss_dssp             SSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCC
T ss_pred             CCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCC
Confidence            3467899999999999999999999999999543

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=5.8e-09  Score=65.11  Aligned_cols=33  Identities=27%  Similarity=0.444  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2ep1_A            5 SSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTG   37 (46)
T ss_dssp             CCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSS
T ss_pred             cCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCC
Confidence            456789999999999999999999999998853

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.9e-09  Score=63.27  Aligned_cols=35  Identities=34%  Similarity=0.488  Sum_probs=32.2

Q ss_pred             ccCCCCCceeCccccccCCCh-hhHHhhhhhcccCc
Q 024499          150 SSGSGGRTHECSICHKSFPTG-QALGGHKRCHYEGG  184 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~-~~L~~H~r~H~~~~  184 (267)
                      ++|+++++|+|.+|++.|.+. ..|..|+++|.+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            468899999999999999999 99999999998763

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=5.9e-09  Score=65.20  Aligned_cols=34  Identities=32%  Similarity=0.532  Sum_probs=29.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2em6_A            5 SSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE   38 (46)
T ss_dssp             SCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSS
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999988533

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=4.7e-09  Score=65.57  Aligned_cols=34  Identities=26%  Similarity=0.545  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2yti_A            5 SSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGE   38 (46)
T ss_dssp             CCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCS
T ss_pred             cCCCCCcCeECCCCCcccCChhHHHHHhHhcCCC
Confidence            4567899999999999999999999999888533

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=5.4e-09  Score=65.30  Aligned_cols=33  Identities=30%  Similarity=0.526  Sum_probs=28.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.+
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq2_A            5 SSGTGGKPYQCNECGKAFSQTSKLARHQRVHTG   37 (46)
T ss_dssp             CSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCC
T ss_pred             cccCCCCCeECCCCCcccCCHHHHHHHHHHcCC
Confidence            456789999999999999999999999998853

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.8e-09  Score=62.35  Aligned_cols=35  Identities=31%  Similarity=0.480  Sum_probs=31.8

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +.|+++++|+|.+|++.|.+...|..|+++|.+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            35789999999999999999999999999998763

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=6.6e-09  Score=64.98  Aligned_cols=34  Identities=24%  Similarity=0.475  Sum_probs=29.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2yth_A            5 SSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGE   38 (46)
T ss_dssp             SCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTC
T ss_pred             cCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCC
Confidence            4567899999999999999999999999988543

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.8e-09  Score=63.63  Aligned_cols=35  Identities=40%  Similarity=0.446  Sum_probs=32.0

Q ss_pred             cccCCCCCceeCccccccCCChhhHHhh-hhhcccC
Q 024499          149 ASSGSGGRTHECSICHKSFPTGQALGGH-KRCHYEG  183 (267)
Q Consensus       149 ~~~h~g~kp~~C~~C~k~F~~~~~L~~H-~r~H~~~  183 (267)
                      +++|+++|||+|.+|++.|.+...|..| +++|.++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4678999999999999999999999999 9999864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.9e-09  Score=64.02  Aligned_cols=33  Identities=33%  Similarity=0.495  Sum_probs=30.3

Q ss_pred             cCCCCCceeCcc--ccccCCChhhHHhhhhhcccC
Q 024499          151 SGSGGRTHECSI--CHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       151 ~h~g~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      .++++|||+|.+  |+|.|.+.+.|..|+++|+++
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            357999999986  999999999999999999875

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=7.4e-09  Score=64.67  Aligned_cols=33  Identities=30%  Similarity=0.531  Sum_probs=28.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eq1_A            5 SSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTG   37 (46)
T ss_dssp             CCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCC
T ss_pred             cccCCCCCeECCcCChhhCCHHHHHHHHHHhCC
Confidence            456789999999999999999999999998853

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=7.8e-09  Score=64.63  Aligned_cols=35  Identities=29%  Similarity=0.499  Sum_probs=30.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (46)
T 2eoz_A            5 SSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET   39 (46)
T ss_dssp             CCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCC
T ss_pred             ccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999999995443

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8e-09  Score=63.06  Aligned_cols=34  Identities=26%  Similarity=0.469  Sum_probs=29.6

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         3 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (42)
T 2yte_A            3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVK   36 (42)
T ss_dssp             SSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCC
T ss_pred             cCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCC
Confidence            3467899999999999999999999999999543

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=6.7e-09  Score=64.94  Aligned_cols=34  Identities=32%  Similarity=0.574  Sum_probs=29.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (46)
T 2enh_A            5 SSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGE   38 (46)
T ss_dssp             CCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCS
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999988543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.3e-09  Score=61.99  Aligned_cols=34  Identities=29%  Similarity=0.430  Sum_probs=31.5

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +|.++++|+|.+|++.|.....|..|+++|.+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            5789999999999999999999999999998763

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=4.6e-09  Score=61.98  Aligned_cols=35  Identities=31%  Similarity=0.543  Sum_probs=31.8

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      ..|+++++|+|.+|++.|.+...|..|+++|.+++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            35789999999999999999999999999998763

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=6.9e-09  Score=64.88  Aligned_cols=33  Identities=27%  Similarity=0.540  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   37 (46)
T 2eoy_A            5 SSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTR   37 (46)
T ss_dssp             CCCCCSCCEECSSSCCEESSSHHHHHHHTTCCS
T ss_pred             cccCCCCCEECcCCCCcCCCHHHHHHHHHHcCC
Confidence            456789999999999999999999999998853

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=7.8e-09  Score=64.62  Aligned_cols=35  Identities=31%  Similarity=0.491  Sum_probs=30.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2eoh_A            5 SSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGER   39 (46)
T ss_dssp             CSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCC
T ss_pred             CCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCC
Confidence            45678999999999999999999999999995443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.74  E-value=5.5e-10  Score=78.83  Aligned_cols=57  Identities=18%  Similarity=0.195  Sum_probs=52.2

Q ss_pred             CC--CCCCCCCCCCCCCCCcccccccCCCCCceeCcc--ccccCCChhhHHhhhhhcccCcCCCCCC
Q 024499          128 DA--SASPNAAAASDVTPPPSATASSGSGGRTHECSI--CHKSFPTGQALGGHKRCHYEGGINNNNN  190 (267)
Q Consensus       128 ~c--~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~~~~~~~~  190 (267)
                      .|  ..|++.|....   .|..|+++|.++++|+|.+  |++.|.+...|..|+++|.+   +.|..
T Consensus         3 ~C~~~~C~~~f~~~~---~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~   63 (85)
T 2j7j_A            3 VCHFENCGKAFKKHN---QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKK   63 (85)
T ss_dssp             ECCSTTCCCEESSHH---HHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCS
T ss_pred             cCCCCCCCcccCCHH---HHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCC
Confidence            47  88999999998   9999999999999999998  99999999999999999998   55544

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=8.5e-09  Score=72.13  Aligned_cols=62  Identities=23%  Similarity=0.317  Sum_probs=52.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChh
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQ  171 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~  171 (267)
                      ..+-++++|.|..|++.|. ...|..|+ .|                              .++++|.|..|++.|. ..
T Consensus        10 ~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~------------------------------c~~~~~~C~~C~~~~~-~~   56 (75)
T 2d9k_A           10 ETECPLRLAVCQHCDLELS-ILKLKEHE-DY------------------------------CGARTELCGNCGRNVL-VK   56 (75)
T ss_dssp             CCCCCCCCEECSSSCCEEC-HHHHHHHH-HH------------------------------HHHCEEECSSSCCEEE-TT
T ss_pred             cccCCCcccCCcccChHhh-HHHHHHHH-hH------------------------------cCCCceEcccCCCcCc-HH
Confidence            4456889999999999994 88889888 67                              4779999999999987 48


Q ss_pred             hHHhhhhhcccCcCC
Q 024499          172 ALGGHKRCHYEGGIN  186 (267)
Q Consensus       172 ~L~~H~r~H~~~~~~  186 (267)
                      .|..|+++|.++...
T Consensus        57 ~l~~H~~~c~~~~~~   71 (75)
T 2d9k_A           57 DLKTHPEVCGREGSG   71 (75)
T ss_dssp             GGGTHHHHBTTBSSS
T ss_pred             HHHHHHHHccCCcCC
Confidence            999999999988544

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.73  E-value=1e-08  Score=66.61  Aligned_cols=48  Identities=29%  Similarity=0.410  Sum_probs=43.4

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhh-hcccCcCCCCCCCCCCCCC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKR-CHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r-~H~~~~~~~~~~~~ss~~~  197 (267)
                      ..|.++++|.|.+|++.|.+...|..|++ +|.+++++.|..|...+.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            35688999999999999999999999997 9999999999998887664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1e-08  Score=63.28  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2eof_A            5 SSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGE   38 (44)
T ss_dssp             SCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCC
Confidence            4567899999999999999999999999999543

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.72  E-value=1.1e-08  Score=62.43  Aligned_cols=35  Identities=23%  Similarity=0.451  Sum_probs=30.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         4 ~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   38 (42)
T 2epc_A            4 GSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG   38 (42)
T ss_dssp             SCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCC
T ss_pred             ccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCC
Confidence            45678999999999999999999999999995443

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.3e-08  Score=63.63  Aligned_cols=35  Identities=34%  Similarity=0.519  Sum_probs=30.6

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   39 (46)
T 2yto_A            5 SSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGER   39 (46)
T ss_dssp             CCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCC
T ss_pred             cccCCCCCEECcccCCccCCHhHHHHHHHHcCCCC
Confidence            45678999999999999999999999999995443

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=6.2e-09  Score=61.27  Aligned_cols=34  Identities=44%  Similarity=0.787  Sum_probs=31.5

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +|.++++|.|.+|++.|.+...|..|+++|.+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5788999999999999999999999999998764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.72  E-value=8.1e-09  Score=65.29  Aligned_cols=42  Identities=29%  Similarity=0.374  Sum_probs=38.6

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCC
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNS  192 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~  192 (267)
                      .|.++++|.|.+|++.|.+...|..|+++|.+++++.|..++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            457889999999999999999999999999999999997764

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=8.5e-09  Score=63.67  Aligned_cols=34  Identities=26%  Similarity=0.504  Sum_probs=29.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2eoj_A            5 SSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ   38 (44)
T ss_dssp             CSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSS
T ss_pred             cccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999988543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.72  E-value=4e-09  Score=70.75  Aligned_cols=52  Identities=10%  Similarity=0.146  Sum_probs=46.6

Q ss_pred             cccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCCCC
Q 024499          145 PSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNKS  199 (267)
Q Consensus       145 L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~~~  199 (267)
                      |..|+++|++++||.|.+|++.|.+...|.   ++|.+++++.|..|...+....
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~   53 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDE   53 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECT
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCc
Confidence            678999999999999999999999998886   8999999999999988776544

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.1e-08  Score=63.21  Aligned_cols=34  Identities=26%  Similarity=0.404  Sum_probs=30.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|+++
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2eou_A            5 SSGAAKTTSECQECGKIFRHSSLLIEHQALHAGE   38 (44)
T ss_dssp             CSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTS
T ss_pred             CCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCC
Confidence            4567899999999999999999999999999543

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=9.3e-09  Score=62.75  Aligned_cols=34  Identities=29%  Similarity=0.447  Sum_probs=29.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2ytb_A            4 GSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS   37 (42)
T ss_dssp             CCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCC
T ss_pred             cccCCCCCeeCCCccchhCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999998888543

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.3e-08  Score=62.81  Aligned_cols=34  Identities=24%  Similarity=0.522  Sum_probs=29.9

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2yu5_A            5 SSGAGENPFKCSKCDRVFTQRNYLVQHERTHARK   38 (44)
T ss_dssp             CCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCC
T ss_pred             cccCCCCCeECCCCCchhCCHHHHHHHhHhcCCC
Confidence            4567899999999999999999999999999543

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.6e-09  Score=62.76  Aligned_cols=36  Identities=22%  Similarity=0.412  Sum_probs=31.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++++
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~   39 (42)
T 2en2_A            4 GSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP   39 (42)
T ss_dssp             CCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCS
T ss_pred             cccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCC
Confidence            456789999999999999999999999999965443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.70  E-value=5e-09  Score=66.53  Aligned_cols=36  Identities=19%  Similarity=0.363  Sum_probs=30.1

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhh-hcccCcCC
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKR-CHYEGGIN  186 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r-~H~~~~~~  186 (267)
                      +|+++|+|.|.+|++.|.+...|..|++ +|.++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            5789999999999999999999999999 99987654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=6.8e-09  Score=75.01  Aligned_cols=36  Identities=22%  Similarity=0.445  Sum_probs=31.4

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++++
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp   53 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQ   53 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCC
Confidence            456789999999999999999999999999965444

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=9.5e-09  Score=63.37  Aligned_cols=34  Identities=29%  Similarity=0.389  Sum_probs=29.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (44)
T 2en7_A            5 SSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGE   38 (44)
T ss_dssp             CCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCS
T ss_pred             cCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCC
Confidence            4567899999999999999999999999888543

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.2e-08  Score=63.63  Aligned_cols=34  Identities=32%  Similarity=0.551  Sum_probs=29.6

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eq3_A            5 SSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGK   38 (46)
T ss_dssp             CSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCC
T ss_pred             cCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999988533

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7e-09  Score=64.85  Aligned_cols=34  Identities=29%  Similarity=0.560  Sum_probs=30.1

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2emz_A            5 SSGSGERPFKCNECGKGFGRRSHLAGHLRLHSRE   38 (46)
T ss_dssp             SCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHT
T ss_pred             cCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999999543

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.3e-08  Score=62.88  Aligned_cols=35  Identities=23%  Similarity=0.477  Sum_probs=30.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|.|.+|++.|.....|..|+++|.+++
T Consensus         5 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2emb_A            5 SSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKS   39 (44)
T ss_dssp             SCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCC
T ss_pred             cccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCC
Confidence            45678999999999999999999999999995443

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.6e-08  Score=62.52  Aligned_cols=34  Identities=29%  Similarity=0.530  Sum_probs=30.2

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         5 ~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (44)
T 2eox_A            5 SSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRK   38 (44)
T ss_dssp             CCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCC
T ss_pred             cCCCCCCCeECcccCcccCCHHHHHHHHHHhCCC
Confidence            4567899999999999999999999999999543

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1e-08  Score=62.72  Aligned_cols=35  Identities=23%  Similarity=0.474  Sum_probs=29.7

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.+++
T Consensus         4 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   38 (42)
T 2eos_A            4 GSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG   38 (42)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCS
T ss_pred             cccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45678999999999999999999999999885443

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.67  E-value=1.3e-08  Score=69.75  Aligned_cols=39  Identities=23%  Similarity=0.152  Sum_probs=34.9

Q ss_pred             CCCCCceeCcc--ccccCCChhhHHhhh-hhcccCcCCCCCC
Q 024499          152 GSGGRTHECSI--CHKSFPTGQALGGHK-RCHYEGGINNNNN  190 (267)
Q Consensus       152 h~g~kp~~C~~--C~k~F~~~~~L~~H~-r~H~~~~~~~~~~  190 (267)
                      ++|+|||+|.+  |+|.|.+.++|..|+ ++|++++++-+..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            47999999975  999999999999998 6899999998743

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.66  E-value=9.6e-09  Score=70.62  Aligned_cols=51  Identities=20%  Similarity=0.275  Sum_probs=45.9

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      .+.++|+++++|.|.+|++.|.....|..|+++|.+++++.|..|...+..
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~   54 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQ   54 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESS
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCC
Confidence            356788999999999999999999999999999999999999988776554

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.66  E-value=1.1e-08  Score=72.39  Aligned_cols=55  Identities=16%  Similarity=0.257  Sum_probs=48.5

Q ss_pred             CcccccccCCCCCceeCccccccCCChhhHHhhhhhcccC----cCCCCCCCCCCCCCC
Q 024499          144 PPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG----GINNNNNNSSSNNNK  198 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~----~~~~~~~~~ss~~~~  198 (267)
                      .|.+|+++|+++++|.|.+|++.|.....|..|+++|+..    +++.|..|...+...
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~   60 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR   60 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCH
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCH
Confidence            6789999999999999999999999999999999987765    678898887766553

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=2.6e-08  Score=61.59  Aligned_cols=36  Identities=28%  Similarity=0.373  Sum_probs=31.3

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|+++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~   40 (44)
T 2epv_A            5 SSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSG   40 (44)
T ss_dssp             CCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSC
T ss_pred             cccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCC
Confidence            456789999999999999999999999999965443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.1e-08  Score=60.31  Aligned_cols=34  Identities=35%  Similarity=0.641  Sum_probs=31.1

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      .|.++++|+|.+|++.|.....|..|+++|.+++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999998763

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.65  E-value=2.5e-08  Score=58.28  Aligned_cols=34  Identities=24%  Similarity=0.423  Sum_probs=30.7

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      +.++++|+|.+|++.|.....|..|+++|+++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4588999999999999999999999999987653

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=2.7e-08  Score=58.89  Aligned_cols=35  Identities=29%  Similarity=0.525  Sum_probs=31.6

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      .+.++++|+|.+|++.|.....|..|+++|+++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            46689999999999999999999999999987653

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.3e-08  Score=63.55  Aligned_cols=36  Identities=22%  Similarity=0.349  Sum_probs=31.0

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++++
T Consensus         5 ~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~   40 (46)
T 2en3_A            5 SSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDP   40 (46)
T ss_dssp             CCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCC
T ss_pred             cccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCC
Confidence            456789999999999999999999999999964433

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.64  E-value=2.8e-08  Score=57.90  Aligned_cols=34  Identities=29%  Similarity=0.379  Sum_probs=30.5

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      +.++++|.|.+|++.|.....|..|+++|+++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4578999999999999999999999999987653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.63  E-value=1.4e-08  Score=60.60  Aligned_cols=35  Identities=23%  Similarity=0.234  Sum_probs=32.3

Q ss_pred             CCCCCceeCc--cccccCCChhhHHhhhhhcccCcCC
Q 024499          152 GSGGRTHECS--ICHKSFPTGQALGGHKRCHYEGGIN  186 (267)
Q Consensus       152 h~g~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~~~  186 (267)
                      |+++++|.|.  .|++.|.+...|..|+++|.+++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5789999999  5999999999999999999998765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.63  E-value=9.5e-09  Score=64.82  Aligned_cols=41  Identities=22%  Similarity=0.314  Sum_probs=35.4

Q ss_pred             CcccccccCCCCCceeCc--cccccCCChhhHHhhhhhcccCc
Q 024499          144 PPSATASSGSGGRTHECS--ICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      .+..|...|+++++|+|.  .|++.|.+...|..|+++|++++
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445566779999999996  69999999999999999999764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.61  E-value=1.8e-08  Score=58.51  Aligned_cols=32  Identities=25%  Similarity=0.339  Sum_probs=29.8

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCcCCC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGGINN  187 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~  187 (267)
                      |||+|.+|++.|.+...|..|+++|.+++++.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            68999999999999999999999999998764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=3.8e-08  Score=59.55  Aligned_cols=32  Identities=22%  Similarity=0.301  Sum_probs=29.3

Q ss_pred             CCCCcceeccc--cccccCChHHHHHhHHhhCCC
Q 024499           94 PSLKLSYKCSV--CNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        94 ~~g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+++||+|.+  |+|.|..+..|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45899999986  999999999999999999865

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.59  E-value=5.1e-09  Score=73.07  Aligned_cols=49  Identities=20%  Similarity=0.209  Sum_probs=44.1

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhccc---CcCCCCCCCCCCCCCCC
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYE---GGINNNNNNSSSNNNKS  199 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~---~~~~~~~~~~ss~~~~~  199 (267)
                      +|+++++|+|.+|++.|.+...|..|+++|.+   ++++.|..|...+....
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~   52 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPD   52 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHH
Confidence            47899999999999999999999999999996   88999999988776644

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.58  E-value=3.8e-08  Score=70.60  Aligned_cols=51  Identities=16%  Similarity=0.222  Sum_probs=45.7

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCCC
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNK  198 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~~  198 (267)
                      .+.++...++|.|.+|++.|.+...|..|+++|+++++|.|..|..++...
T Consensus        19 ~~~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   69 (85)
T 2lv2_A           19 VLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS   69 (85)
T ss_dssp             CCSSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSH
T ss_pred             CCCCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCH
Confidence            355677889999999999999999999999999999999999998877654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=1.1e-07  Score=64.92  Aligned_cols=37  Identities=22%  Similarity=0.339  Sum_probs=33.1

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccCcCC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGIN  186 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~  186 (267)
                      ..|.++|||+|.+|+|.|.+...|..|+++|+++...
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~   42 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQ   42 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccc
Confidence            3467899999999999999999999999999987543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.56  E-value=2.4e-08  Score=59.38  Aligned_cols=34  Identities=26%  Similarity=0.444  Sum_probs=30.8

Q ss_pred             cCCCCCceeCcc--ccccCCChhhHHhhhhhcccCc
Q 024499          151 SGSGGRTHECSI--CHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       151 ~h~g~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      .|+++++|.|.+  |++.|.+.+.|..|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            368999999995  9999999999999999999764

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=5.1e-08  Score=57.30  Aligned_cols=34  Identities=24%  Similarity=0.418  Sum_probs=30.3

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      .+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            3568899999999999999999999999997653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.55  E-value=1.6e-09  Score=70.49  Aligned_cols=34  Identities=12%  Similarity=0.214  Sum_probs=25.8

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      .+.++++|.|.+|++.|.....|..|+++|++++
T Consensus        18 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A           18 RSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             HHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             hcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            4467778888888888888888888888886554

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.55  E-value=3.9e-08  Score=70.97  Aligned_cols=50  Identities=14%  Similarity=0.141  Sum_probs=43.2

Q ss_pred             CcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCC
Q 024499          144 PPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSS  193 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~s  193 (267)
                      .+..|.++|+++++|.|.+|++.|.+...|..|+++|++++++.|.....
T Consensus        12 ~~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           12 FIILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             eeeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            34455677999999999999999999999999999999999998876543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=7.2e-08  Score=56.52  Aligned_cols=34  Identities=26%  Similarity=0.333  Sum_probs=30.5

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      .+.++++|+|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            4568899999999999999999999999998653

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.55  E-value=7.9e-09  Score=59.55  Aligned_cols=32  Identities=22%  Similarity=0.338  Sum_probs=29.2

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCcCCC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGGINN  187 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~  187 (267)
                      |||+|.+|++.|.+...|..|+++|+++++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            58999999999999999999999999988653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=6.7e-08  Score=56.78  Aligned_cols=33  Identities=30%  Similarity=0.450  Sum_probs=30.1

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      .+.++++|+|.+|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            456899999999999999999999999999765

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.54  E-value=5.7e-08  Score=58.30  Aligned_cols=33  Identities=48%  Similarity=0.811  Sum_probs=29.3

Q ss_pred             CCCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      .++++|+|.+|++.|.....|..|+++|+++++
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   34 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRA   34 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcc
Confidence            478899999999999999999999999976554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=8.3e-08  Score=56.24  Aligned_cols=34  Identities=29%  Similarity=0.445  Sum_probs=30.4

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      .+.++++|.|.+|++.|.....|..|+++|++++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            3568899999999999999999999999998653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=1.3e-07  Score=64.77  Aligned_cols=36  Identities=31%  Similarity=0.364  Sum_probs=31.7

Q ss_pred             CCCCCCcceeccc--cccccCChHHHHHhH-HhhCCCCC
Q 024499           92 EPPSLKLSYKCSV--CNKAFSSYQALGGHK-ASHRKNAA  127 (267)
Q Consensus        92 ~~~~g~~p~~C~~--C~k~F~~~~~L~~H~-~~H~~~k~  127 (267)
                      ...+|++||+|.+  |+|.|.+..+|..|+ ++|+++++
T Consensus        20 ~~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP   58 (73)
T 1x3c_A           20 TRYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLP   58 (73)
T ss_dssp             SSSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCC
T ss_pred             ccccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCC
Confidence            4457999999975  999999999999997 68988777

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=7.7e-08  Score=56.88  Aligned_cols=34  Identities=24%  Similarity=0.286  Sum_probs=30.4

Q ss_pred             CCCCCcceeccccccccCCh-HHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSY-QALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~-~~L~~H~~~H~~~k  126 (267)
                      .+.++++|+|.+|++.|... ..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            45689999999999999999 99999999997653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=1e-07  Score=55.99  Aligned_cols=33  Identities=27%  Similarity=0.450  Sum_probs=29.7

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +.++++|+|.+|++.|.....|..|+++|++++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            457899999999999999999999999998653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.49  E-value=5.9e-08  Score=66.14  Aligned_cols=47  Identities=32%  Similarity=0.388  Sum_probs=42.8

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      .|+++++|+|.+|++.|.....|..|+++|.+++++.|..|...+..
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~   49 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQ   49 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCC
Confidence            46789999999999999999999999999999999999988776654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=1.4e-07  Score=55.65  Aligned_cols=34  Identities=21%  Similarity=0.403  Sum_probs=30.5

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+.++++|+|.+|++.|.....|..|+++|.++
T Consensus         4 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            4567899999999999999999999999999753

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.46  E-value=2.1e-07  Score=63.42  Aligned_cols=40  Identities=20%  Similarity=0.287  Sum_probs=34.4

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCCCCCCCCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASP  133 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~  133 (267)
                      ..+++||+|.+|+|.|.....|..|+++|+++...+..++
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~   47 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYID   47 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcccccccc
Confidence            5578999999999999999999999999998766554443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.46  E-value=7.3e-08  Score=53.47  Aligned_cols=29  Identities=24%  Similarity=0.305  Sum_probs=26.9

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||.|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            68999999999999999999999998763

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=7.2e-08  Score=53.71  Aligned_cols=30  Identities=20%  Similarity=0.349  Sum_probs=27.6

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            479999999999999999999999998763

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.44  E-value=3.7e-08  Score=66.23  Aligned_cols=49  Identities=12%  Similarity=0.154  Sum_probs=42.2

Q ss_pred             cccCCCCCceeCccccccCCChhhHHhhhhh-c-ccCcCCCCCCCCCCCCC
Q 024499          149 ASSGSGGRTHECSICHKSFPTGQALGGHKRC-H-YEGGINNNNNNSSSNNN  197 (267)
Q Consensus       149 ~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~-H-~~~~~~~~~~~~ss~~~  197 (267)
                      +++|+++++|.|.+|++.|.+...|..|+++ | .+++++.|..|...+..
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~   52 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTR   52 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESC
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCC
Confidence            4578899999999999999999999999998 7 58899999888765543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=8.5e-08  Score=52.86  Aligned_cols=28  Identities=32%  Similarity=0.572  Sum_probs=26.0

Q ss_pred             CCceeCccccccCCChhhHHhhhhhccc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      +++|+|.+|++.|.+...|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4799999999999999999999999974

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.42  E-value=1e-07  Score=52.78  Aligned_cols=29  Identities=28%  Similarity=0.629  Sum_probs=26.7

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      ++|.|.+|++.|.+...|..|+++|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999998763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.42  E-value=1.3e-07  Score=54.63  Aligned_cols=30  Identities=23%  Similarity=0.435  Sum_probs=27.0

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      +||.|.+|++.|.....|..|+++|+++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~   30 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGE   30 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            579999999999999999999999976654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.40  E-value=1.5e-07  Score=59.53  Aligned_cols=34  Identities=26%  Similarity=0.505  Sum_probs=29.1

Q ss_pred             CCCCcceeccccccccCChHHHHHhHH-hhCCCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKA-SHRKNAA  127 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~-~H~~~k~  127 (267)
                      +.++++|+|.+|+|.|.....|..|++ +|.++..
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            568999999999999999999999999 9987654

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.40  E-value=7.5e-08  Score=62.62  Aligned_cols=44  Identities=25%  Similarity=0.305  Sum_probs=36.3

Q ss_pred             CCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          154 GGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       154 g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      |+++|+|.+|++.|.+...|..|+++|.+++++.|..|...+..
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   44 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQ   44 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESS
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCC
Confidence            56899999999999999999999999999999999887765443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.40  E-value=1.1e-07  Score=52.52  Aligned_cols=29  Identities=31%  Similarity=0.657  Sum_probs=26.9

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||+|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999998764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.39  E-value=1.1e-07  Score=52.06  Aligned_cols=27  Identities=26%  Similarity=0.429  Sum_probs=25.3

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      +++|.|.+|++.|.+...|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            479999999999999999999999985

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=2.3e-07  Score=51.58  Aligned_cols=29  Identities=24%  Similarity=0.544  Sum_probs=26.7

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      +++|.|.+|++.|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            46899999999999999999999999765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.38  E-value=8.8e-08  Score=52.61  Aligned_cols=27  Identities=22%  Similarity=0.538  Sum_probs=25.3

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      ++||+|.+|++.|.+...|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999984

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.38  E-value=2.2e-07  Score=55.07  Aligned_cols=33  Identities=24%  Similarity=0.446  Sum_probs=29.4

Q ss_pred             CCCCcceeccc--cccccCChHHHHHhHHhhCCCC
Q 024499           94 PSLKLSYKCSV--CNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        94 ~~g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +.++++|.|.+  |++.|.....|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            45889999995  9999999999999999998653

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.1e-07  Score=55.12  Aligned_cols=33  Identities=24%  Similarity=0.293  Sum_probs=29.7

Q ss_pred             CCCCCcceeccccccccCChHHHHHh-HHhhCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGH-KASHRKN  125 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H-~~~H~~~  125 (267)
                      .+.+++||+|.+|++.|.....|..| ++.|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            46689999999999999999999999 8999754

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.37  E-value=1.1e-07  Score=52.47  Aligned_cols=29  Identities=31%  Similarity=0.461  Sum_probs=26.9

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      ++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999998763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.37  E-value=1.9e-07  Score=53.16  Aligned_cols=30  Identities=33%  Similarity=0.564  Sum_probs=27.5

Q ss_pred             CCceeCc--cccccCCChhhHHhhhhhcccCc
Q 024499          155 GRTHECS--ICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       155 ~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      ++||.|.  .|++.|.+...|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4799999  89999999999999999998763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=4.6e-08  Score=54.45  Aligned_cols=29  Identities=28%  Similarity=0.547  Sum_probs=26.7

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||.|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998763

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.36  E-value=2.5e-07  Score=64.12  Aligned_cols=52  Identities=19%  Similarity=0.266  Sum_probs=45.7

Q ss_pred             ccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          146 SATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       146 ~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      ..+...+.++++|.|.+|++.|.....|..|+++|.+++++.|..|...+..
T Consensus         7 ~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   58 (77)
T 2cot_A            7 GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQ   58 (77)
T ss_dssp             CCCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESS
T ss_pred             CCCcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCC
Confidence            4455667889999999999999999999999999999999999888776654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.72  E-value=4.8e-08  Score=54.62  Aligned_cols=30  Identities=27%  Similarity=0.409  Sum_probs=27.3

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +++|+|.+|++.|.....|..|+++|.+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998753

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.36  E-value=1.9e-07  Score=52.78  Aligned_cols=29  Identities=34%  Similarity=0.611  Sum_probs=26.7

Q ss_pred             CceeCc--cccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECS--ICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||.|.  +|++.|.+...|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999998763

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.35  E-value=1.8e-07  Score=64.38  Aligned_cols=47  Identities=21%  Similarity=0.266  Sum_probs=42.5

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      .+.++++|+|.+|++.|.....|..|+++|.+++++.|..|...+..
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~   57 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNR   57 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCC
Confidence            45789999999999999999999999999999999999988776554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.35  E-value=2e-07  Score=51.81  Aligned_cols=29  Identities=17%  Similarity=0.306  Sum_probs=26.9

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      ++|+|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            58999999999999999999999998765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.33  E-value=3e-07  Score=50.17  Aligned_cols=27  Identities=22%  Similarity=0.584  Sum_probs=25.0

Q ss_pred             CcceeccccccccCChHHHHHhHHhhC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      +++|.|.+|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            468999999999999999999999884

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.33  E-value=2.4e-07  Score=50.42  Aligned_cols=27  Identities=33%  Similarity=0.656  Sum_probs=24.1

Q ss_pred             ceeCccccccCCChhhHHhhhhhcccC
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      ||+|.+|++.|.+...|..|+++|.++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            589999999999999999999999863

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.32  E-value=2.5e-07  Score=50.70  Aligned_cols=27  Identities=22%  Similarity=0.619  Sum_probs=24.9

Q ss_pred             CcceeccccccccCChHHHHHhHHhhC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ++||+|.+|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468999999999999999999999884

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.32  E-value=2.4e-07  Score=55.31  Aligned_cols=28  Identities=18%  Similarity=0.263  Sum_probs=25.6

Q ss_pred             CCCCCceeCccccccCCChhhHHhhhhh
Q 024499          152 GSGGRTHECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       152 h~g~kp~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      +.|+|||+|.+|+|.|.+.++|..|+..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCe
Confidence            4789999999999999999999999843

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.32  E-value=3e-07  Score=50.84  Aligned_cols=28  Identities=25%  Similarity=0.462  Sum_probs=26.0

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5799999999999999999999999765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.32  E-value=3.8e-07  Score=54.11  Aligned_cols=33  Identities=24%  Similarity=0.434  Sum_probs=29.2

Q ss_pred             CCCcceecc--ccccccCChHHHHHhHHhhCCCCC
Q 024499           95 SLKLSYKCS--VCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        95 ~g~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      .++++|+|.  .|++.|.....|..|+++|+++++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            478999999  599999999999999999976653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.32  E-value=3.6e-07  Score=50.45  Aligned_cols=28  Identities=36%  Similarity=0.686  Sum_probs=25.9

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ++|.|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999999765

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.30  E-value=3.4e-07  Score=50.29  Aligned_cols=28  Identities=36%  Similarity=0.598  Sum_probs=25.5

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      +++|.|.+|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4689999999999999999999999863

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.28  E-value=3.5e-07  Score=51.01  Aligned_cols=29  Identities=21%  Similarity=0.516  Sum_probs=26.4

Q ss_pred             CceeCccccccCCChhhHHhh-hhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGH-KRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H-~r~H~~~~  184 (267)
                      ++|.|.+|++.|.+...|..| +++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 78998763

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=4.1e-07  Score=50.14  Aligned_cols=29  Identities=28%  Similarity=0.448  Sum_probs=26.3

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47999999999999999999999997653

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=5.8e-07  Score=51.05  Aligned_cols=30  Identities=40%  Similarity=0.681  Sum_probs=27.0

Q ss_pred             Ccceecc--ccccccCChHHHHHhHHhhCCCC
Q 024499           97 KLSYKCS--VCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        97 ~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +++|.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            4689999  89999999999999999998653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.57  E-value=1.2e-07  Score=51.33  Aligned_cols=26  Identities=31%  Similarity=0.540  Sum_probs=24.4

Q ss_pred             CceeCccccccCCChhhHHhhhhhcc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      |||+|.+|++.|.+...|..|+++|.
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            68999999999999999999999984

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.23  E-value=7.1e-08  Score=55.38  Aligned_cols=30  Identities=27%  Similarity=0.449  Sum_probs=24.4

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      +||+|.+|++.|.....|..|+++|+++++
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp   30 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVA   30 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSS
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCC
Confidence            479999999999998888888888865543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.21  E-value=4.8e-07  Score=59.40  Aligned_cols=42  Identities=19%  Similarity=0.343  Sum_probs=38.4

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      |||.|.+|++.|.+...|..|+++|.+++++.|..|...+..
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   42 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTR   42 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCC
Confidence            589999999999999999999999999999999888776654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.20  E-value=7.6e-07  Score=50.22  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=26.1

Q ss_pred             cceecc--ccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCS--VCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            479998  99999999999999999998653

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=5e-07  Score=49.66  Aligned_cols=28  Identities=29%  Similarity=0.497  Sum_probs=25.9

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ++|.|.+|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4799999999999999999999999765

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.20  E-value=7.6e-07  Score=49.32  Aligned_cols=29  Identities=17%  Similarity=0.386  Sum_probs=26.3

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      ++|.|.+|++.|.....|..|+++|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47999999999999999999999997654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=52.06  Aligned_cols=29  Identities=28%  Similarity=0.481  Sum_probs=26.2

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      +++|+|.+|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36899999999999999999999999764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=51.83  Aligned_cols=28  Identities=29%  Similarity=0.551  Sum_probs=25.5

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ++|+|.+|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4799999999999999999999999764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.18  E-value=7.5e-07  Score=48.33  Aligned_cols=26  Identities=35%  Similarity=0.859  Sum_probs=23.8

Q ss_pred             ceeccccccccCChHHHHHhHHhhCC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      +|+|.+|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            59999999999999999999999975

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.16  E-value=7.8e-07  Score=60.78  Aligned_cols=49  Identities=16%  Similarity=0.150  Sum_probs=43.0

Q ss_pred             cccCCCCCceeCc--cccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          149 ASSGSGGRTHECS--ICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       149 ~~~h~g~kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      ..+|.++++|.|.  .|++.|.....|..|+++|.+++++.|..|...+..
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   61 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSR   61 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCC
Confidence            4457899999997  599999999999999999999999999888765543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.10  E-value=1.6e-06  Score=51.62  Aligned_cols=26  Identities=35%  Similarity=0.513  Sum_probs=24.3

Q ss_pred             CCCcceeccccccccCChHHHHHhHH
Q 024499           95 SLKLSYKCSVCNKAFSSYQALGGHKA  120 (267)
Q Consensus        95 ~g~~p~~C~~C~k~F~~~~~L~~H~~  120 (267)
                      .+++||+|.+|+|.|.+..+|..|+.
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~p   29 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcCC
Confidence            48999999999999999999999984

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.37  E-value=4.1e-07  Score=49.14  Aligned_cols=26  Identities=31%  Similarity=0.598  Sum_probs=23.9

Q ss_pred             cceeccccccccCChHHHHHhHHhhC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      +||.|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            57999999999999999999999883

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.09  E-value=1.2e-06  Score=48.62  Aligned_cols=28  Identities=36%  Similarity=0.702  Sum_probs=25.3

Q ss_pred             cceeccccccccCChHHHHHh-HHhhCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGH-KASHRKN  125 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H-~~~H~~~  125 (267)
                      ++|.|..|++.|.....|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 7889765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=9.5e-07  Score=55.33  Aligned_cols=34  Identities=18%  Similarity=0.397  Sum_probs=30.0

Q ss_pred             CCCCCcceecc--ccccccCChHHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCS--VCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      .+.++++|+|.  .|++.|.....|..|+++|++++
T Consensus        12 ~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            36689999996  79999999999999999998753

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.06  E-value=1.5e-06  Score=56.25  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=37.3

Q ss_pred             ceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCC
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNN  197 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~  197 (267)
                      ||.|.+|++.|.....|..|+++|.+++++.|..|...+..
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   41 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKT   41 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcC
Confidence            69999999999999999999999999999999888776554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.05  E-value=1.4e-06  Score=47.98  Aligned_cols=27  Identities=30%  Similarity=0.512  Sum_probs=25.2

Q ss_pred             CceeCc--cccccCCChhhHHhhhhhccc
Q 024499          156 RTHECS--ICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       156 kp~~C~--~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      ++|.|.  +|++.|.....|..|+++|.+
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.96  E-value=5e-06  Score=45.58  Aligned_cols=27  Identities=30%  Similarity=0.685  Sum_probs=24.7

Q ss_pred             cceecc--ccccccCChHHHHHhHHhhCC
Q 024499           98 LSYKCS--VCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        98 ~p~~C~--~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            479999  999999999999999999963

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.92  E-value=4.3e-06  Score=59.93  Aligned_cols=26  Identities=23%  Similarity=0.298  Sum_probs=23.8

Q ss_pred             eeccccccccCChHHHHHhHHhhCCC
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      |.|.+|++.|.....|..|+++|+++
T Consensus        63 ~~C~~C~k~f~~~~~L~~H~~~H~~~   88 (95)
T 2ej4_A           63 EECPREGKSFKAKYKLVNHIRVHTGE   88 (95)
T ss_dssp             TTCSSTTCCCSSHHHHHHHHHHHHTC
T ss_pred             cCCCCCCcccCCHHHHHHHHHhcCCC
Confidence            99999999999999999999999543

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=97.87  E-value=9e-06  Score=55.23  Aligned_cols=48  Identities=23%  Similarity=0.231  Sum_probs=40.4

Q ss_pred             cccCCCCCceeCcc--ccccCCChhhHHhhhhhcccCcCCCCCC--CCCCCC
Q 024499          149 ASSGSGGRTHECSI--CHKSFPTGQALGGHKRCHYEGGINNNNN--NSSSNN  196 (267)
Q Consensus       149 ~~~h~g~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~~~~~~~~--~~ss~~  196 (267)
                      ...+...++|.|.+  |++.|.....|..|+++|.+++++.|..  |...+.
T Consensus         9 ~~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~   60 (72)
T 2epa_A            9 QIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFA   60 (72)
T ss_dssp             CCCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEES
T ss_pred             CCCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccC
Confidence            34456789999998  9999999999999999999999999953  655443

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.86  E-value=5.5e-06  Score=57.57  Aligned_cols=50  Identities=14%  Similarity=0.084  Sum_probs=45.7

Q ss_pred             CcccccccCCCCCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCC
Q 024499          144 PPSATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSN  195 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~  195 (267)
                      .|..|+++|.++|+|.|.+|++.| ....|..|+ .|.+++++.|..+....
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~   53 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNV   53 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEE
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcC
Confidence            889999999999999999999999 599999999 99999999998876643

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.71  E-value=1.1e-05  Score=54.10  Aligned_cols=44  Identities=20%  Similarity=0.265  Sum_probs=39.0

Q ss_pred             CCCCceeCccccccCCChhhHHhhhhhcccCcCCCCC-CCCCCCCCC
Q 024499          153 SGGRTHECSICHKSFPTGQALGGHKRCHYEGGINNNN-NNSSSNNNK  198 (267)
Q Consensus       153 ~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~-~~~ss~~~~  198 (267)
                      -++++|.|.+|++.|. ...|..|+++ .+++++.|. .+..++...
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~   50 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAR   50 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEET
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccH
Confidence            5789999999999999 9999999999 999999998 887765543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.10  E-value=0.00029  Score=54.00  Aligned_cols=74  Identities=18%  Similarity=0.281  Sum_probs=52.7

Q ss_pred             CcceeccccccccCChHHHHHhH--HhhCCC-CC-CCCCC-------CCCCCCCCCCCCcccccccCCCCCceeCccccc
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHK--ASHRKN-AA-DASAS-------PNAAAASDVTPPPSATASSGSGGRTHECSICHK  165 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~--~~H~~~-k~-~c~~C-------~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k  165 (267)
                      .+++.|.+|+..|.+...+..|.  +.|... +. .+ .+       ++.+.       ...+...+.+.+.|.|.+|++
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~C~~C~~  101 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMA-INQGEDSVPAKKFK-------AAPAEISDGEDRSKCCPVCNM  101 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHH-HTTCCCCCSCCCCS-------CCSSCCSSCCCTTTEETTTTE
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhc-ccCcccCCCCCccC-------CCccccccCCCCCeEcCCCCC
Confidence            46799999999999999999998  456532 11 11 11       11111       112344567788999999999


Q ss_pred             cCCChhhHHhhhh
Q 024499          166 SFPTGQALGGHKR  178 (267)
Q Consensus       166 ~F~~~~~L~~H~r  178 (267)
                      .|.+...|..|..
T Consensus       102 ~f~s~~~~~~H~~  114 (127)
T 1zu1_A          102 TFSSPVVAESHYI  114 (127)
T ss_dssp             ECSSHHHHHHHHT
T ss_pred             EeCCHHHHHHHHC
Confidence            9999999999985

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.00  E-value=0.00014  Score=55.24  Aligned_cols=33  Identities=27%  Similarity=0.468  Sum_probs=29.1

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhc
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCH  180 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H  180 (267)
                      +-..|+|+++|.|.+|+|.|.+..+|..|+++.
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            345678999999999999999999999999853

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.84  E-value=0.0012  Score=44.19  Aligned_cols=57  Identities=19%  Similarity=0.241  Sum_probs=43.4

Q ss_pred             eecc--ccccccCChHHHHHhHH-hhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCc--cccccCCChhhHH
Q 024499          100 YKCS--VCNKAFSSYQALGGHKA-SHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECS--ICHKSFPTGQALG  174 (267)
Q Consensus       100 ~~C~--~C~k~F~~~~~L~~H~~-~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~--~C~k~F~~~~~L~  174 (267)
                      |.|.  .|++.|.+...|..|+. .|.+.+..                        ....+|.|.  .|++.+.....|.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~------------------------~~~~~~~C~W~~C~~~~~~~~~L~   57 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFK------------------------HPMEPLACNWEDCDFLGDDTASIV   57 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCC------------------------CSSCCEECCCSSCCCEESSHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccC------------------------CCCCCCEeeCCCCcCCCCChHHHH
Confidence            4454  59999999999999984 68543210                        122479997  7999999999999


Q ss_pred             hhhhhc
Q 024499          175 GHKRCH  180 (267)
Q Consensus       175 ~H~r~H  180 (267)
                      .|+|+.
T Consensus        58 ~Hir~~   63 (64)
T 1zw8_A           58 NHINAQ   63 (64)
T ss_dssp             HHHHHH
T ss_pred             hhcccc
Confidence            999865

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.54  E-value=0.0006  Score=51.79  Aligned_cols=29  Identities=21%  Similarity=0.209  Sum_probs=26.5

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhh
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      ++|+++|.|..|+|.|.+..+|..|+++.
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            56899999999999999999999998864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.97  E-value=0.012  Score=36.38  Aligned_cols=25  Identities=32%  Similarity=0.472  Sum_probs=22.9

Q ss_pred             cceeccccccccCChHHHHHhHHhh
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      ..|.|+.|++.|.....|+.||+--
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmkyc   35 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYC   35 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhhc
Confidence            6799999999999999999999843

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.42  E-value=0.041  Score=34.02  Aligned_cols=31  Identities=23%  Similarity=0.396  Sum_probs=26.1

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCcCC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGGIN  186 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~  186 (267)
                      -.|.|+.|++.|.....|+.||+---++.+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~~v~   41 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPEMVE   41 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTTTCC
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcchhh
Confidence            5799999999999999999999965555443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=86.45  E-value=0.69  Score=26.77  Aligned_cols=27  Identities=22%  Similarity=0.343  Sum_probs=23.2

Q ss_pred             CCcceeccccccccCChHHHHHhHHhh
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      ....+.|..|+-.|.....+..|++--
T Consensus         5 ~~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            5 EVMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             ccCcCeeccccceehhhHHHhhhheec
Confidence            345699999999999999999998743

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=86.00  E-value=0.41  Score=27.52  Aligned_cols=26  Identities=27%  Similarity=0.388  Sum_probs=22.5

Q ss_pred             ceeCccccccCCChhhHHhhhh-hccc
Q 024499          157 THECSICHKSFPTGQALGGHKR-CHYE  182 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r-~H~~  182 (267)
                      .|.|++|.+.|.....|..|.. .|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            4999999999999999999986 4543

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=85.87  E-value=0.22  Score=39.31  Aligned_cols=83  Identities=17%  Similarity=0.161  Sum_probs=54.5

Q ss_pred             cceec--cccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHH
Q 024499           98 LSYKC--SVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALG  174 (267)
Q Consensus        98 ~p~~C--~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~  174 (267)
                      ....|  ..|+..+. ...|..|...= .-.+ .|..|+..+...    .|..|....-..+...|..|+..|.. ..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~~r~----~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~  153 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPFQKF----HINIHILKDCPRRQVSCDNCAASMAF-EDKE  153 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEEEGG----GHHHHHHHTCTTCEEECTTTCCEEEG-GGHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHHHHH----HHHHHhhhhCCCCCeECCCCCCccCH-HHHH
Confidence            34667  46877765 44577776321 1222 777888877433    57778766667788999999998855 5688


Q ss_pred             hhhhhcccCcCCC
Q 024499          175 GHKRCHYEGGINN  187 (267)
Q Consensus       175 ~H~r~H~~~~~~~  187 (267)
                      .|..++.|+.++.
T Consensus       154 ~H~~~~~~~~~~~  166 (170)
T 3hcs_A          154 IHDQNCPLALEHH  166 (170)
T ss_dssp             HHHTTCCC-----
T ss_pred             hHHHhCcChhhhh
Confidence            9999999886653

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=84.96  E-value=1.4  Score=30.32  Aligned_cols=60  Identities=18%  Similarity=0.397  Sum_probs=41.4

Q ss_pred             ceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhhhh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      -|.|+.||.++.- ..|..|...-                              .+-..|.|-.|++.|.. .....|-.
T Consensus        10 ~F~C~~Cgd~lKK-~kv~~H~~~C------------------------------r~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A           10 FFTCNACGESVKK-IQVEKHVSNC------------------------------RNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             EEEESSSCCEEET-THHHHHHHHC------------------------------TTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             EEEcCCCCCeeec-ccchhHHhhC------------------------------CCCCcEEecccCCeeCC-CCEeCEee
Confidence            3999999988874 4588886532                              12345888889999874 55777877


Q ss_pred             hcccCcCCCCCC
Q 024499          179 CHYEGGINNNNN  190 (267)
Q Consensus       179 ~H~~~~~~~~~~  190 (267)
                      .-++...|....
T Consensus        58 CISEaeKY~g~~   69 (79)
T 1wjv_A           58 CISEGQKYGGKG   69 (79)
T ss_dssp             CCSCTTSSCCCS
T ss_pred             eCChhheeeecc
Confidence            666666665433

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=84.50  E-value=0.33  Score=34.13  Aligned_cols=28  Identities=25%  Similarity=0.272  Sum_probs=21.8

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCcC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGGI  185 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~  185 (267)
                      ..-..|-+|||.|.   .|.+|+++|+|..+
T Consensus        19 ~d~iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             CCceEecccchhhH---HHHHHHHHccCCCH
Confidence            34578999999998   58899999776543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=84.46  E-value=0.74  Score=26.41  Aligned_cols=25  Identities=28%  Similarity=0.522  Sum_probs=21.9

Q ss_pred             ceeccccccccCChHHHHHhHHh-hC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS-HR  123 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~-H~  123 (267)
                      -|.|++|.+.|.+...|..|-.. |.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            39999999999999999999754 53

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.88  E-value=1.3  Score=31.05  Aligned_cols=29  Identities=24%  Similarity=0.395  Sum_probs=22.4

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      ...-..|-+|||.|..   |++|.++|++..+
T Consensus        18 ~~d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           18 QDDHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CSSCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CCCceEecccchhhHH---HHHHHHHccCCCH
Confidence            4455789999999984   8899999765443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=82.33  E-value=0.37  Score=37.99  Aligned_cols=57  Identities=11%  Similarity=0.110  Sum_probs=41.7

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCC-CCCCCCCCCCCCCCCCCcccccccCCCCCce
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAA-DASASPNAAAASDVTPPPSATASSGSGGRTH  158 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~-~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~  158 (267)
                      .++..|+.|+..+ .+..|..|....-..+. .|..|+..+...    .|..|..++.|+.++
T Consensus       108 ~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~----~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          108 FALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE----DKEIHDQNCPLALEH  165 (170)
T ss_dssp             TSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG----GHHHHHTTCCC----
T ss_pred             ceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH----HHHhHHHhCcChhhh
Confidence            4568899999988 56679999876655555 899999887654    578899888887664

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	267
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	3e-11
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	1e-10

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 55.1 bits (133), Expect = 3e-11
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 156 RTHECSICHKSFPTGQALGGHKRCH 180
           R++ CS C + F + QALGGH   H
Sbjct: 4   RSYTCSFCKREFRSAQALGGHMNVH 28

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.2 bits (128), Expect = 1e-10
 Identities = 16/29 (55%), Positives = 19/29 (65%)

Query: 99  SYKCSVCNKAFSSYQALGGHKASHRKNAA 127
           SY CS C + F S QALGGH   HR++ A
Sbjct: 5   SYTCSFCKREFRSAQALGGHMNVHRRDRA 33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	267
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.65
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.42
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.35
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.31
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.29
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.23
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.15
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.14
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.05
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.04
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.03
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.03
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.0
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.99
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.9
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.88
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.87
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.85
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.83
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.81
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.73
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.72
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	98.69
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.69
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.67
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.67
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.66
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.66
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.59
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.59
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.51
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.48
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.4
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.4
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.38
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.31
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.26
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.21
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.09
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.02
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.02
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.94
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.93
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.92
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.77
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.75
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.75
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.73
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.69
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.62
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.4
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.38
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.28
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.28
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.24
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.21
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.15
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.14
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.09
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.06
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.01
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.92
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.88
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.86
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.83
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.69
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.47
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.38
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.38
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.22
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.12
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.0
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.0
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.75
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.09
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.0
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.92
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.89
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.85
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.72
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.7
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.67
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.64
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.42
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.33
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.69
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.15
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.13
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.03
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.24
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	90.08
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.9
d1y0jb1	36	U-shaped transcription factor, different fingers {	88.99
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.85
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	88.72
d1y0jb1	36	U-shaped transcription factor, different fingers {	87.01
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	85.26
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.97
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.98
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.3
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	81.55

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=3.9e-17  Score=106.00  Aligned_cols=53  Identities=32%  Similarity=0.627  Sum_probs=50.4

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCCCCCCCCCCCCCCCCCCCcccccccCCCCCceeCccccccCCChhhHHhh
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAADASASPNAAAASDVTPPPSATASSGSGGRTHECSICHKSFPTGQALGGH  176 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~~c~~C~~~f~~~~~~~~L~~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H  176 (267)
                      |+||+|+ |||.|....+|..|+++|                              +|+|||.|.+||+.|.+...|..|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~H------------------------------t~ekpy~C~~C~k~F~~~~~L~~H   49 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMH------------------------------LGLRPYGCGVCGKKFKMKHHLVGH   49 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHH------------------------------SCCCSEECTTTSCEESSSHHHHHH
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhcc------------------------------ccccCCcCCCcCCEecCHHHHHHH
Confidence            6899995 999999999999999999                              588999999999999999999999


Q ss_pred             hhhc
Q 024499          177 KRCH  180 (267)
Q Consensus       177 ~r~H  180 (267)
                      +++|
T Consensus        50 ~r~H   53 (53)
T d2csha1          50 MKIH   53 (53)
T ss_dssp             HTTT
T ss_pred             HhcC
Confidence            9998

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.5e-14  Score=84.96  Aligned_cols=37  Identities=27%  Similarity=0.444  Sum_probs=35.8

Q ss_pred             cccccCCCCCceeCccccccCCChhhHHhhhhhcccC
Q 024499          147 ATASSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       147 ~H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      +|+++|+++|||+|.+|||.|.+.++|..|+|+|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999986

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.8e-13  Score=78.75  Aligned_cols=33  Identities=30%  Similarity=0.488  Sum_probs=31.8

Q ss_pred             cCCCCCceeCccccccCCChhhHHhhhhhcccC
Q 024499          151 SGSGGRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       151 ~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      +|+|+|||+|.+|||+|.+.+.|..|+|+|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            689999999999999999999999999999986

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=3.9e-13  Score=79.74  Aligned_cols=35  Identities=23%  Similarity=0.530  Sum_probs=33.5

Q ss_pred             ccccCCCCCceeCccccccCCChhhHHhhhhhccc
Q 024499          148 TASSGSGGRTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       148 H~~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |.++|+|+|||+|.+|++.|.+.++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999975

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=5.9e-13  Score=78.44  Aligned_cols=34  Identities=26%  Similarity=0.422  Sum_probs=32.4

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      |+|+|+|||+|.+||+.|.+.++|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            5899999999999999999999999999999875

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.23  E-value=1.8e-12  Score=75.47  Aligned_cols=32  Identities=31%  Similarity=0.577  Sum_probs=30.6

Q ss_pred             CCCCCceeCccccccCCChhhHHhhhhhcccC
Q 024499          152 GSGGRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       152 h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      |+|+|||+|.+|+|.|.+..+|..|+|+|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            68999999999999999999999999999865

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.4e-12  Score=74.98  Aligned_cols=34  Identities=26%  Similarity=0.439  Sum_probs=30.5

Q ss_pred             ccCCCCCceeCccccccCCChhhHHhhhhhcccC
Q 024499          150 SSGSGGRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       150 ~~h~g~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      ++|+|+|||+|.+|++.|.+.++|..|++.|+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            5799999999999999999999999998765544

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=4.2e-12  Score=79.13  Aligned_cols=40  Identities=23%  Similarity=0.389  Sum_probs=37.0

Q ss_pred             CcccccccCCCCCceeCcc--ccccCCChhhHHhhhhhcccCc
Q 024499          144 PPSATASSGSGGRTHECSI--CHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       144 ~L~~H~~~h~g~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      .|.+|+. |+|+|||.|.+  |+|.|.+.++|..|+++|+|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            6778885 99999999988  9999999999999999999985

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.15  E-value=1.2e-11  Score=73.77  Aligned_cols=28  Identities=36%  Similarity=0.670  Sum_probs=25.1

Q ss_pred             CCcceeccccccccCChHHHHHhHH-hhC
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKA-SHR  123 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~-~H~  123 (267)
                      .++||+|.+|||.|....+|..|++ +|+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht   30 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHT   30 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccC
Confidence            4789999999999999999999976 673

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.14  E-value=5.7e-12  Score=69.49  Aligned_cols=28  Identities=29%  Similarity=0.636  Sum_probs=27.0

Q ss_pred             CCceeCccccccCCChhhHHhhhhhccc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      ||||+|.+|+|.|.+.++|..|+|+|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6999999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=9.6e-12  Score=69.32  Aligned_cols=29  Identities=28%  Similarity=0.629  Sum_probs=27.9

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||+|.+|+|.|.+.+.|..|+|+|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            79999999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.9e-11  Score=70.04  Aligned_cols=33  Identities=33%  Similarity=0.446  Sum_probs=30.7

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      .++|++||+|.+|||.|.....|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            367999999999999999999999999999875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=1.9e-11  Score=67.98  Aligned_cols=29  Identities=24%  Similarity=0.490  Sum_probs=27.8

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||.|.+|+|.|.+.++|..|+|+|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            79999999999999999999999999985

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=6e-11  Score=68.86  Aligned_cols=32  Identities=25%  Similarity=0.450  Sum_probs=29.8

Q ss_pred             CCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           94 PSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        94 ~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ++|++||+|.+|+|.|..+.+|..|+++|+..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46999999999999999999999999999754

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=4e-11  Score=66.00  Aligned_cols=28  Identities=25%  Similarity=0.608  Sum_probs=26.6

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      ||||+|.+|+|.|.+..+|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6899999999999999999999999975

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.8e-11  Score=70.67  Aligned_cols=36  Identities=25%  Similarity=0.454  Sum_probs=33.3

Q ss_pred             CCCceeCccccccCCChhhHHhhhh-hcccCcCCCCC
Q 024499          154 GGRTHECSICHKSFPTGQALGGHKR-CHYEGGINNNN  189 (267)
Q Consensus       154 g~kp~~C~~C~k~F~~~~~L~~H~r-~H~~~~~~~~~  189 (267)
                      -+|||+|.+|||.|.+..+|..|++ +|+++++|.|.
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4799999999999999999999986 79999999884

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.03  E-value=5.9e-11  Score=66.03  Aligned_cols=29  Identities=34%  Similarity=0.658  Sum_probs=27.4

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +||+|.+|+|.|....+|..|+++|++++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999875

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=8.2e-11  Score=69.92  Aligned_cols=34  Identities=29%  Similarity=0.544  Sum_probs=31.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ..+++++||+|++|||.|...++|..|+++|+++
T Consensus         5 ~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           5 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5678999999999999999999999999999875

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.3e-10  Score=68.13  Aligned_cols=33  Identities=27%  Similarity=0.398  Sum_probs=30.7

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhCCC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      .++|++||+|.+|+|.|....+|..|+++|.++
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            578999999999999999999999999999754

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=5.1e-11  Score=64.01  Aligned_cols=26  Identities=31%  Similarity=0.597  Sum_probs=25.1

Q ss_pred             CceeCccccccCCChhhHHhhhhhcc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      |||+|.+|||.|.+.+.|..|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999995

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.4e-10  Score=64.40  Aligned_cols=29  Identities=24%  Similarity=0.535  Sum_probs=27.3

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +||.|.+|+|.|.+.++|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=2.6e-10  Score=61.16  Aligned_cols=26  Identities=42%  Similarity=0.690  Sum_probs=24.8

Q ss_pred             cceeccccccccCChHHHHHhHHhhC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |||+|.+|||.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999994

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=6.4e-10  Score=65.52  Aligned_cols=33  Identities=21%  Similarity=0.437  Sum_probs=30.8

Q ss_pred             CCCCCCcceeccccccccCChHHHHHhHHhhCC
Q 024499           92 EPPSLKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        92 ~~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      +.++|++||+|.+|+|.|..+++|..|+++|.+
T Consensus         4 R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           4 RGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             STTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            668899999999999999999999999999964

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.7e-10  Score=63.05  Aligned_cols=28  Identities=32%  Similarity=0.676  Sum_probs=26.8

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhcccC
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      |||.|.+  |+|.|.+.++|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            7999999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.85  E-value=3.4e-10  Score=63.31  Aligned_cols=28  Identities=29%  Similarity=0.572  Sum_probs=26.7

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhcccC
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      |||.|++  |+|.|.+.++|..|+|+|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            7999988  999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=1.3e-09  Score=63.65  Aligned_cols=31  Identities=19%  Similarity=0.414  Sum_probs=27.8

Q ss_pred             CCCCCcceeccccccccCChHHHHHhHHhhC
Q 024499           93 PPSLKLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        93 ~~~g~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      .++||+||+|++|+|.|....+|..|++.+.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            5789999999999999999999999986543

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=8.9e-10  Score=62.07  Aligned_cols=29  Identities=34%  Similarity=0.611  Sum_probs=26.9

Q ss_pred             CceeCc--cccccCCChhhHHhhhhhcccCc
Q 024499          156 RTHECS--ICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       156 kp~~C~--~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |||.|+  .|+|.|.+.++|..|+|+|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            699996  49999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.5e-09  Score=59.62  Aligned_cols=28  Identities=32%  Similarity=0.595  Sum_probs=26.3

Q ss_pred             cceeccc--cccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      |||+|.+  |+|.|.+.++|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899998  999999999999999999875

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=2.3e-09  Score=59.81  Aligned_cols=28  Identities=29%  Similarity=0.532  Sum_probs=26.2

Q ss_pred             cceeccc--cccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      |||+|.+  |+|.|....+|..|+++|+++
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899987  999999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.4e-09  Score=54.82  Aligned_cols=26  Identities=38%  Similarity=0.871  Sum_probs=24.7

Q ss_pred             ceeCccccccCCChhhHHhhhhhccc
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |++|.+|+|.|++++.|..|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            68999999999999999999999986

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=2.3e-09  Score=68.38  Aligned_cols=43  Identities=19%  Similarity=0.174  Sum_probs=39.5

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCcCCCCCCCCCCCCCC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGGINNNNNNSSSNNNK  198 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~~~~~~ss~~~~  198 (267)
                      ||||+|. ||+.|....+|..|+++|++++++.|..|..++...
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~   43 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMK   43 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSS
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCH
Confidence            6899995 999999999999999999999999999998877654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.4e-09  Score=61.72  Aligned_cols=25  Identities=28%  Similarity=0.608  Sum_probs=22.6

Q ss_pred             eeccc--cccccCChHHHHHhHHhhCC
Q 024499          100 YKCSV--CNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus       100 ~~C~~--C~k~F~~~~~L~~H~~~H~~  124 (267)
                      |.|++  |+|.|.+..+|++|+++|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htg   28 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSD   28 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCC
Confidence            88987  99999999999999999953

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=4.9e-09  Score=58.94  Aligned_cols=29  Identities=28%  Similarity=0.608  Sum_probs=26.4

Q ss_pred             cceecc--ccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCS--VCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~--~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +||.|+  .|+|.|....+|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589996  59999999999999999999875

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.67  E-value=2.8e-09  Score=58.85  Aligned_cols=27  Identities=30%  Similarity=0.640  Sum_probs=25.7

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhccc
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |||.|.+  |+|.|.+.++|..|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            7999988  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.66  E-value=5.4e-09  Score=59.07  Aligned_cols=29  Identities=34%  Similarity=0.604  Sum_probs=27.1

Q ss_pred             CCceeCcc--ccccCCChhhHHhhhhhcccC
Q 024499          155 GRTHECSI--CHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       155 ~kp~~C~~--C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      ||||.|.+  |+|.|.+.++|..|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999864

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.66  E-value=2.4e-09  Score=66.34  Aligned_cols=34  Identities=18%  Similarity=0.430  Sum_probs=31.2

Q ss_pred             CCCCCcceeccc--cccccCChHHHHHhHHhhCCCC
Q 024499           93 PPSLKLSYKCSV--CNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        93 ~~~g~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      .+.|++||+|.+  |+|.|...++|..|+++|++++
T Consensus        12 ~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          12 KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            367999999987  9999999999999999999875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1e-08  Score=52.40  Aligned_cols=26  Identities=38%  Similarity=0.643  Sum_probs=24.3

Q ss_pred             ceeccccccccCChHHHHHhHHhhCC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      |++|++|+|.|.++..|+.|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57999999999999999999999974

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=7.1e-09  Score=56.58  Aligned_cols=26  Identities=31%  Similarity=0.581  Sum_probs=24.7

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhcc
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~  181 (267)
                      |||.|.+  |+|.|.+.++|..|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999988  9999999999999999995

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=1.7e-08  Score=57.02  Aligned_cols=29  Identities=38%  Similarity=0.692  Sum_probs=26.7

Q ss_pred             Ccceeccc--cccccCChHHHHHhHHhhCCC
Q 024499           97 KLSYKCSV--CNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        97 ~~p~~C~~--C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      |+||.|.+  |+|.|.+..+|..|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999753

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.2e-08  Score=59.31  Aligned_cols=32  Identities=25%  Similarity=0.335  Sum_probs=29.4

Q ss_pred             eeCcc--ccccCCChhhHHhhhhhcccCcCCCCC
Q 024499          158 HECSI--CHKSFPTGQALGGHKRCHYEGGINNNN  189 (267)
Q Consensus       158 ~~C~~--C~k~F~~~~~L~~H~r~H~~~~~~~~~  189 (267)
                      |.|.+  |+|.|.+..+|..|+++|++++++.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            78987  999999999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.51  E-value=1.8e-08  Score=55.53  Aligned_cols=27  Identities=33%  Similarity=0.635  Sum_probs=25.2

Q ss_pred             cceeccc--cccccCChHHHHHhHHhhCC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H~~  124 (267)
                      |||+|.+  |+|.|.+..+|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899988  99999999999999999975

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.48  E-value=3.2e-08  Score=52.20  Aligned_cols=27  Identities=22%  Similarity=0.600  Sum_probs=25.8

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      +|||.|.+||+.|.+.+...+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999996

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3e-08  Score=54.02  Aligned_cols=26  Identities=35%  Similarity=0.685  Sum_probs=24.4

Q ss_pred             cceeccc--cccccCChHHHHHhHHhhC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H~  123 (267)
                      +||+|.+  |+|.|.+.++|+.|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999995

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.40  E-value=8.6e-08  Score=55.11  Aligned_cols=29  Identities=52%  Similarity=0.966  Sum_probs=26.4

Q ss_pred             cceeccccccccCChHHHHHhHHhhCCCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +.|+|.+|+|.|.+.++|++||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            46999999999999999999999997654

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.38  E-value=6.5e-08  Score=55.62  Aligned_cols=31  Identities=39%  Similarity=0.755  Sum_probs=28.0

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccCcC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEGGI  185 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~  185 (267)
                      .|.|+|.+|+|.|.+.++|++||+.|..++.
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchHH
Confidence            3679999999999999999999999987654

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=2.2e-07  Score=48.93  Aligned_cols=27  Identities=19%  Similarity=0.541  Sum_probs=25.5

Q ss_pred             CcceeccccccccCChHHHHHhHHhhC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |+||.|++||+.|.+....++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999995

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=2.7e-07  Score=49.32  Aligned_cols=29  Identities=28%  Similarity=0.548  Sum_probs=26.8

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ++||.|++|+..|.++..+..|.++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999753

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.21  E-value=2.1e-07  Score=49.74  Aligned_cols=29  Identities=21%  Similarity=0.453  Sum_probs=27.4

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      +|||.|++|+..|.+++.+.-|.|.|-|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            58999999999999999999999999875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=7.3e-07  Score=46.57  Aligned_cols=29  Identities=28%  Similarity=0.450  Sum_probs=27.1

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      +|||+|..|...-...+.|..|+|.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            58999999999999999999999999974

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.9e-06  Score=47.05  Aligned_cols=31  Identities=29%  Similarity=0.551  Sum_probs=26.6

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCCCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKNAA  127 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~k~  127 (267)
                      .+...|+.|||.|....+|.+|+.+|.+++|
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            3457899999999999999999999976654

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.2e-06  Score=47.83  Aligned_cols=32  Identities=28%  Similarity=0.387  Sum_probs=29.0

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccCcCCC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEGGINN  187 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~~~~~  187 (267)
                      |.+.|.+|||.|..-..|.+|+..|.++++|.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            56789999999999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=2.2e-06  Score=44.45  Aligned_cols=28  Identities=32%  Similarity=0.573  Sum_probs=25.4

Q ss_pred             CceeCccccccCCChhhHHhhhhhcccC
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      +.+.|.+|||.|...+.|++|+.+|+++
T Consensus         1 r~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            3578999999999999999999999975

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.3e-06  Score=43.80  Aligned_cols=27  Identities=30%  Similarity=0.497  Sum_probs=24.7

Q ss_pred             ceeccccccccCChHHHHHhHHhhCCC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      .+.|.+|||.|.....|++|+..|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            478999999999999999999999864

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.92  E-value=2.3e-06  Score=43.78  Aligned_cols=26  Identities=38%  Similarity=0.598  Sum_probs=24.6

Q ss_pred             eCccccccCCChhhHHhhhhhcccCc
Q 024499          159 ECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       159 ~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      +|+.|.|.|.++..|..|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999875

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=6.3e-06  Score=43.14  Aligned_cols=27  Identities=22%  Similarity=0.241  Sum_probs=25.4

Q ss_pred             eeCccccccCCChhhHHhhhhhcccCc
Q 024499          158 HECSICHKSFPTGQALGGHKRCHYEGG  184 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H~~~~  184 (267)
                      |.|.+||......+.|.+|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999874

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.75  E-value=8.8e-06  Score=41.55  Aligned_cols=26  Identities=31%  Similarity=0.524  Sum_probs=24.2

Q ss_pred             eccccccccCChHHHHHhHHhhCCCC
Q 024499          101 KCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus       101 ~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      +|+.|.|.|.++..|+.|-+.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999998864

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=9.8e-06  Score=42.21  Aligned_cols=29  Identities=28%  Similarity=0.477  Sum_probs=26.6

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      ++||+|..|...-...+.|..|.+.|++.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999863

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=6.2e-06  Score=47.51  Aligned_cols=26  Identities=31%  Similarity=0.561  Sum_probs=23.8

Q ss_pred             CCCCceeCccccccCCChhhHHhhhh
Q 024499          153 SGGRTHECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus       153 ~g~kp~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      +|.|||+|.+|+|.|.+.+.+.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            47899999999999999999999964

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=7.8e-06  Score=43.49  Aligned_cols=27  Identities=19%  Similarity=0.440  Sum_probs=24.7

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhccc
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |||.|.+  |+|++...+.|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6999988  99999999999999998764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.1e-05  Score=41.74  Aligned_cols=27  Identities=22%  Similarity=0.433  Sum_probs=25.4

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcc
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      .|||+|..|...-...+.|.+|+|+|.
T Consensus         1 vkp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           1 VKPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCCcccccccchhcchhhHhhhhhccc
Confidence            379999999999999999999999996

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.4e-05  Score=40.18  Aligned_cols=24  Identities=38%  Similarity=0.786  Sum_probs=22.8

Q ss_pred             eeCccccccCCChhhHHhhhhhcc
Q 024499          158 HECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       158 ~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      |+|..|.++|..+++|.+|+|.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.4e-05  Score=40.14  Aligned_cols=24  Identities=38%  Similarity=0.911  Sum_probs=22.8

Q ss_pred             eeccccccccCChHHHHHhHHhhC
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |+|..|.+.|..+++|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.62  E-value=2.4e-05  Score=40.90  Aligned_cols=29  Identities=31%  Similarity=0.573  Sum_probs=26.6

Q ss_pred             CcceeccccccccCChHHHHHhHHhhCCC
Q 024499           97 KLSYKCSVCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        97 ~~p~~C~~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      +..|.|.+|..+|.+.-.|..||.+|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            45699999999999999999999999874

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=5.8e-05  Score=39.40  Aligned_cols=27  Identities=22%  Similarity=0.360  Sum_probs=25.2

Q ss_pred             eeccccccccCChHHHHHhHHhhCCCC
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHRKNA  126 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~~~k  126 (267)
                      |.|+.||......+-|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            899999999999999999999998763

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=3e-05  Score=41.59  Aligned_cols=28  Identities=25%  Similarity=0.538  Sum_probs=25.2

Q ss_pred             CceeCcc--ccccCCChhhHHhhh-hhcccC
Q 024499          156 RTHECSI--CHKSFPTGQALGGHK-RCHYEG  183 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~-r~H~~~  183 (267)
                      |||.|.+  |.|.|...+...+|+ |+|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6999988  999999999999997 899754

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=8.1e-05  Score=42.74  Aligned_cols=26  Identities=27%  Similarity=0.505  Sum_probs=23.6

Q ss_pred             CCcceeccccccccCChHHHHHhHHh
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      |-+||.|.+|+|.|.....+.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            67999999999999999999999653

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.28  E-value=9.4e-05  Score=38.51  Aligned_cols=25  Identities=40%  Similarity=0.759  Sum_probs=22.9

Q ss_pred             cceeccc--cccccCChHHHHHhHHhh
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASH  122 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H  122 (267)
                      .||+|..  |+|.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4799975  999999999999999988

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=9.9e-05  Score=38.00  Aligned_cols=26  Identities=31%  Similarity=0.567  Sum_probs=24.6

Q ss_pred             cceeccccccccCChHHHHHhHHhhC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      +||+|..|...-...+.|..|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999994

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00012  Score=38.79  Aligned_cols=26  Identities=23%  Similarity=0.560  Sum_probs=23.6

Q ss_pred             cceeccc--cccccCChHHHHHhHHhhC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H~  123 (267)
                      +||.|.+  |+|.|...+.|..|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            5899987  9999999999999999764

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.18  E-value=9.4e-05  Score=38.68  Aligned_cols=28  Identities=29%  Similarity=0.638  Sum_probs=24.8

Q ss_pred             cceeccc--cccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      +||.|..  |.|.|.+..+|.+|..+|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5789965  999999999999999999864

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=8e-05  Score=38.77  Aligned_cols=26  Identities=31%  Similarity=0.560  Sum_probs=23.5

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhcc
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~  181 (267)
                      .||+|+.  |++.|...+.|++|.++|.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvha   29 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVHA   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhccC
Confidence            5899976  9999999999999999883

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.15  E-value=7.2e-05  Score=39.05  Aligned_cols=23  Identities=30%  Similarity=0.550  Sum_probs=21.7

Q ss_pred             ceeCccccccCCChhhHHhhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      ||.|..|...|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999974

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.14  E-value=0.00011  Score=38.28  Aligned_cols=29  Identities=24%  Similarity=0.465  Sum_probs=26.9

Q ss_pred             CCceeCccccccCCChhhHHhhhhhcccC
Q 024499          155 GRTHECSICHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      +..|.|..|...|.+.-.|+.||-.|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999975

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.09  E-value=0.00015  Score=38.77  Aligned_cols=26  Identities=23%  Similarity=0.539  Sum_probs=22.8

Q ss_pred             ceeCccccccCCChhhHHhhhh-hccc
Q 024499          157 THECSICHKSFPTGQALGGHKR-CHYE  182 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r-~H~~  182 (267)
                      ||.|.+|++.|.+++-|.+|.+ .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            7999999999999999999987 4543

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00023  Score=37.12  Aligned_cols=24  Identities=33%  Similarity=0.664  Sum_probs=22.4

Q ss_pred             ceeccccccccCChHHHHHhHHhh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASH  122 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H  122 (267)
                      ||.|..|+..|..+.+|..||++.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            699999999999999999999864

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00012  Score=38.33  Aligned_cols=28  Identities=25%  Similarity=0.465  Sum_probs=25.6

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhcccC
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      |||.|.+  |.|.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            6899976  999999999999999999875

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.01  E-value=0.00015  Score=40.98  Aligned_cols=28  Identities=25%  Similarity=0.458  Sum_probs=25.4

Q ss_pred             CCCceeCc--cccccCCChhhHHhhhhhcc
Q 024499          154 GGRTHECS--ICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       154 g~kp~~C~--~C~k~F~~~~~L~~H~r~H~  181 (267)
                      .+|||.|.  -|+..|.+.+.|..|++.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47999995  49999999999999999886

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.92  E-value=0.00026  Score=37.07  Aligned_cols=26  Identities=19%  Similarity=0.363  Sum_probs=23.6

Q ss_pred             CceeCccccccCCChhhHHhhhhhcc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~  181 (267)
                      |||+|.+|.......++|..|.++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            69999999999999999999998644

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00038  Score=39.28  Aligned_cols=28  Identities=25%  Similarity=0.515  Sum_probs=25.3

Q ss_pred             CCcceecc--ccccccCChHHHHHhHHhhC
Q 024499           96 LKLSYKCS--VCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        96 g~~p~~C~--~C~k~F~~~~~L~~H~~~H~  123 (267)
                      .++||.|.  -|+..|.....|..|+..|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            48999995  59999999999999999885

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.00036  Score=36.50  Aligned_cols=27  Identities=26%  Similarity=0.499  Sum_probs=23.7

Q ss_pred             cceeccccccccCChHHHHHhHHh-hCC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKAS-HRK  124 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~-H~~  124 (267)
                      +||+|..|...-...++|+.|+++ |.+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhsk   28 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CCccccccccccccchhhhhhhhccccc
Confidence            589999999999999999999986 543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00024  Score=37.09  Aligned_cols=27  Identities=19%  Similarity=0.326  Sum_probs=23.7

Q ss_pred             CceeCccccccCCChhhHHhhhhhccc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      +||+|.+|..--.+.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            699999999999999999999985443

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.00029  Score=37.64  Aligned_cols=27  Identities=33%  Similarity=0.647  Sum_probs=23.6

Q ss_pred             cceeccc--cccccCChHHHHHhH-HhhCC
Q 024499           98 LSYKCSV--CNKAFSSYQALGGHK-ASHRK  124 (267)
Q Consensus        98 ~p~~C~~--C~k~F~~~~~L~~H~-~~H~~  124 (267)
                      +||.|.+  |.|.|...+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5899987  999999999999997 88853

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.47  E-value=0.00063  Score=34.79  Aligned_cols=23  Identities=26%  Similarity=0.456  Sum_probs=20.8

Q ss_pred             ceeCccccccCCChhhHHhhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      ||+|..|||.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            79999999999999999999643

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.0011  Score=34.15  Aligned_cols=26  Identities=35%  Similarity=0.526  Sum_probs=23.9

Q ss_pred             ceeCccccccCCChhhHHhhhhhccc
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      |-+|+.|..+...+.+|+.|.|+|-.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCcccccccCcHHHHHHhhccccC
Confidence            67899999999999999999999964

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.38  E-value=0.0011  Score=33.11  Aligned_cols=22  Identities=36%  Similarity=0.756  Sum_probs=20.8

Q ss_pred             ceeccccccccCChHHHHHhHH
Q 024499           99 SYKCSVCNKAFSSYQALGGHKA  120 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~  120 (267)
                      ||+|..|...|..+..|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7999999999999999999985

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.22  E-value=0.0013  Score=33.54  Aligned_cols=23  Identities=26%  Similarity=0.611  Sum_probs=21.0

Q ss_pred             ceeccccccccCChHHHHHhHHh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      ||+|..|||.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            69999999999999999999764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.12  E-value=0.0018  Score=34.45  Aligned_cols=25  Identities=36%  Similarity=0.744  Sum_probs=22.2

Q ss_pred             ceeccccccccCChHHHHHhHH-hhC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKA-SHR  123 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~-~H~  123 (267)
                      ||.|.+|++.|.+..-|.+|+. .|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            6999999999999999999976 454

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.00  E-value=0.0014  Score=32.78  Aligned_cols=23  Identities=22%  Similarity=0.573  Sum_probs=21.0

Q ss_pred             ceeCccccccCCChhhHHhhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      .|.|++|-|.|.+++++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            38899999999999999999875

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.00  E-value=0.0014  Score=32.69  Aligned_cols=22  Identities=27%  Similarity=0.520  Sum_probs=20.8

Q ss_pred             ceeCccccccCCChhhHHhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      ||+|..|...|.++..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999985

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.75  E-value=0.0035  Score=32.59  Aligned_cols=24  Identities=21%  Similarity=0.405  Sum_probs=22.1

Q ss_pred             cceeccccccccCChHHHHHhHHh
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      +||+|..|.....+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            589999999999999999999874

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.09  E-value=0.0075  Score=30.05  Aligned_cols=23  Identities=26%  Similarity=0.593  Sum_probs=21.0

Q ss_pred             ceeccccccccCChHHHHHhHHh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      .|.|++|-|.|.++.++..|.++
T Consensus         1 vypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           1 VYPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHH
T ss_pred             CcCCchhhHHhccccCceEEEEE
Confidence            38999999999999999999874

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.0057  Score=33.55  Aligned_cols=26  Identities=23%  Similarity=0.493  Sum_probs=20.5

Q ss_pred             eeccc--cc---cccCChHHHHHhHHhhCCC
Q 024499          100 YKCSV--CN---KAFSSYQALGGHKASHRKN  125 (267)
Q Consensus       100 ~~C~~--C~---k~F~~~~~L~~H~~~H~~~  125 (267)
                      |.|..  |.   +.|..+..|..|+|+|+++
T Consensus         3 y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           3 FVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             eEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            55643  64   5599999999999999875

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.92  E-value=0.0056  Score=33.28  Aligned_cols=26  Identities=23%  Similarity=0.433  Sum_probs=22.9

Q ss_pred             ceeCccccccCCChhhHHhhhhhccc
Q 024499          157 THECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      .|.|..|||.|.++..+.+|-....|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            48999999999999999999876665

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.89  E-value=0.0062  Score=35.94  Aligned_cols=26  Identities=31%  Similarity=0.588  Sum_probs=23.7

Q ss_pred             cceeccccccccCChHHHHHhHHhhC
Q 024499           98 LSYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        98 ~p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      ..|.|..|+|.|.....|+.|...|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35899999999999999999999984

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.013  Score=29.92  Aligned_cols=25  Identities=40%  Similarity=0.466  Sum_probs=23.0

Q ss_pred             ceeccccccccCChHHHHHhHHhhC
Q 024499           99 SYKCSVCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |-+|..|.....++.+|..|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4689999999999999999999994

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.72  E-value=0.0062  Score=31.07  Aligned_cols=23  Identities=26%  Similarity=0.495  Sum_probs=21.2

Q ss_pred             ceeCccccccCCChhhHHhhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      .|+|+.|+....+++.|+.|+|.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            38999999999999999999984

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.012  Score=31.93  Aligned_cols=25  Identities=24%  Similarity=0.592  Sum_probs=22.3

Q ss_pred             eeccccccccCChHHHHHhHHhhCC
Q 024499          100 YKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus       100 ~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      |.|..|+|.|.+...+.+|...-.+
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            9999999999999999999876554

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.67  E-value=0.01  Score=30.08  Aligned_cols=24  Identities=42%  Similarity=0.708  Sum_probs=21.3

Q ss_pred             eecc--ccccccCChHHHHHhHHhhC
Q 024499          100 YKCS--VCNKAFSSYQALGGHKASHR  123 (267)
Q Consensus       100 ~~C~--~C~k~F~~~~~L~~H~~~H~  123 (267)
                      |.|.  .|+|.|.....|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            7785  59999999999999999885

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.0073  Score=33.08  Aligned_cols=20  Identities=25%  Similarity=0.198  Sum_probs=18.0

Q ss_pred             cccCCChhhHHhhhhhcccC
Q 024499          164 HKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       164 ~k~F~~~~~L~~H~r~H~~~  183 (267)
                      ++.|.....|..|+|+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            56799999999999999986

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.42  E-value=0.0073  Score=30.60  Aligned_cols=24  Identities=29%  Similarity=0.505  Sum_probs=20.8

Q ss_pred             eeCcc--ccccCCChhhHHhhhhhcc
Q 024499          158 HECSI--CHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       158 ~~C~~--C~k~F~~~~~L~~H~r~H~  181 (267)
                      |.|..  |+|.|.....|..|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            56754  9999999999999998886

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.33  E-value=0.0085  Score=35.35  Aligned_cols=27  Identities=26%  Similarity=0.458  Sum_probs=23.7

Q ss_pred             CceeCccccccCCChhhHHhhhhhccc
Q 024499          156 RTHECSICHKSFPTGQALGGHKRCHYE  182 (267)
Q Consensus       156 kp~~C~~C~k~F~~~~~L~~H~r~H~~  182 (267)
                      -.|.|..|+|.|.....|+.|..-|--
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            468999999999999999999887753

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.022  Score=28.94  Aligned_cols=23  Identities=22%  Similarity=0.580  Sum_probs=21.2

Q ss_pred             ceeccccccccCChHHHHHhHHh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      .|+|+.|+-...+++.|..|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            49999999999999999999874

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.15  E-value=0.031  Score=30.31  Aligned_cols=26  Identities=19%  Similarity=0.606  Sum_probs=23.3

Q ss_pred             CCcceeccccccccCChHHHHHhHHh
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      |+..|+|.+|.++|...+++-+|-.+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            56679999999999999999999764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.13  E-value=0.021  Score=29.95  Aligned_cols=28  Identities=21%  Similarity=0.377  Sum_probs=25.0

Q ss_pred             CceeCcc--ccccCCChhhHHhhhhhcccC
Q 024499          156 RTHECSI--CHKSFPTGQALGGHKRCHYEG  183 (267)
Q Consensus       156 kp~~C~~--C~k~F~~~~~L~~H~r~H~~~  183 (267)
                      |.|.|+.  |+..|...+.|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            5688876  999999999999999999985

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.03  E-value=0.021  Score=29.26  Aligned_cols=20  Identities=30%  Similarity=0.406  Sum_probs=18.1

Q ss_pred             cccccCCChhhHHhhhhhcc
Q 024499          162 ICHKSFPTGQALGGHKRCHY  181 (267)
Q Consensus       162 ~C~k~F~~~~~L~~H~r~H~  181 (267)
                      -|+|.|...+++++|+.+|-
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            39999999999999999884

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.24  E-value=0.039  Score=35.40  Aligned_cols=26  Identities=23%  Similarity=0.249  Sum_probs=23.3

Q ss_pred             CCcceeccccccccCChHHHHHhHHh
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      |...|-|-.|+|.|.+...|..|+++
T Consensus        12 G~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecccccCccCCHHHHHHHHcc
Confidence            55669999999999999999999875

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.08  E-value=0.14  Score=26.35  Aligned_cols=23  Identities=22%  Similarity=0.504  Sum_probs=20.4

Q ss_pred             ceeccccccccCChHHHHHhHHh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      -|.|..|||...+...++.|.-.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            38999999999999999999653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.90  E-value=0.12  Score=26.97  Aligned_cols=28  Identities=29%  Similarity=0.523  Sum_probs=24.4

Q ss_pred             cceecc--ccccccCChHHHHHhHHhhCCC
Q 024499           98 LSYKCS--VCNKAFSSYQALGGHKASHRKN  125 (267)
Q Consensus        98 ~p~~C~--~C~k~F~~~~~L~~H~~~H~~~  125 (267)
                      +.|.|.  .|+..|...-.|..|.-.|+++
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            468996  4999999999999999999874

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=88.99  E-value=0.096  Score=27.96  Aligned_cols=23  Identities=39%  Similarity=0.639  Sum_probs=20.8

Q ss_pred             ceeccccccccCChHHHHHhHHh
Q 024499           99 SYKCSVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus        99 p~~C~~C~k~F~~~~~L~~H~~~  121 (267)
                      .|.|.-||-.|.+.+.|..|+.-
T Consensus         8 rf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             ceeccccceeecChhHHHhhhhe
Confidence            49999999999999999999763

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.85  E-value=0.061  Score=34.47  Aligned_cols=24  Identities=33%  Similarity=0.618  Sum_probs=21.6

Q ss_pred             CCceeCccccccCCChhhHHhhhh
Q 024499          155 GRTHECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus       155 ~kp~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      .-.|.|-.|+|.|.+..+|..|++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCEEecccccCccCCHHHHHHHHc
Confidence            345999999999999999999986

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.72  E-value=0.14  Score=26.07  Aligned_cols=19  Identities=32%  Similarity=0.545  Sum_probs=17.6

Q ss_pred             ccccccCChHHHHHhHHhh
Q 024499          104 VCNKAFSSYQALGGHKASH  122 (267)
Q Consensus       104 ~C~k~F~~~~~L~~H~~~H  122 (267)
                      -|+|.|...+++..|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            4999999999999999888

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.01  E-value=0.16  Score=27.10  Aligned_cols=22  Identities=23%  Similarity=0.490  Sum_probs=20.3

Q ss_pred             ceeCccccccCCChhhHHhhhh
Q 024499          157 THECSICHKSFPTGQALGGHKR  178 (267)
Q Consensus       157 p~~C~~C~k~F~~~~~L~~H~r  178 (267)
                      .|.|.-||-.|...+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4899999999999999999975

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=85.26  E-value=0.27  Score=28.58  Aligned_cols=26  Identities=19%  Similarity=0.394  Sum_probs=23.7

Q ss_pred             CCCceeCccccccCCChhhHHhhhhh
Q 024499          154 GGRTHECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       154 g~kp~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      .+.|-.|++|+....+..+|++|+..
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHH
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHH
Confidence            56899999999999999999999874

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.97  E-value=0.19  Score=25.64  Aligned_cols=19  Identities=32%  Similarity=0.504  Sum_probs=16.3

Q ss_pred             ccccccCCChhhHHhhhhh
Q 024499          161 SICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       161 ~~C~k~F~~~~~L~~H~r~  179 (267)
                      +-|||.|+.++.|.-|++-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            3499999999999999863

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.98  E-value=0.53  Score=29.32  Aligned_cols=29  Identities=24%  Similarity=0.527  Sum_probs=25.7

Q ss_pred             CCcceeccccccccCChHHHHHhHHhhCC
Q 024499           96 LKLSYKCSVCNKAFSSYQALGGHKASHRK  124 (267)
Q Consensus        96 g~~p~~C~~C~k~F~~~~~L~~H~~~H~~  124 (267)
                      +...|+|..|.-.|.+...|..|...|..
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            44569999999999999999999999964

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.30  E-value=0.22  Score=26.86  Aligned_cols=26  Identities=19%  Similarity=0.456  Sum_probs=22.8

Q ss_pred             CCCceeCccccccCCChhhHHhhhhh
Q 024499          154 GGRTHECSICHKSFPTGQALGGHKRC  179 (267)
Q Consensus       154 g~kp~~C~~C~k~F~~~~~L~~H~r~  179 (267)
                      |+..|.|.+|.+.+..-+++-+|.-+
T Consensus         5 g~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           5 GEHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cCcEEEeehhhHHHHHHHHHHHHHHh
Confidence            56689999999999999999988754

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.55  E-value=0.36  Score=24.62  Aligned_cols=19  Identities=37%  Similarity=0.520  Sum_probs=16.6

Q ss_pred             cccccccCChHHHHHhHHh
Q 024499          103 SVCNKAFSSYQALGGHKAS  121 (267)
Q Consensus       103 ~~C~k~F~~~~~L~~H~~~  121 (267)
                      +-|||.|...+.|..|++-
T Consensus         6 ~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           6 PGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTTCCEESSHHHHHHHHHH
T ss_pred             CCchhhhccHHHHHhHHHH
Confidence            4699999999999999763