Citrus Sinensis ID: 024516

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------

MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY

ccccEEEcccccccccccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccccccccccEEEEccccccEEEEEccccccEEEEcccccEEEcccccccEEEEcccccccc

ccccEEEHHHHHcccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHHHccHHHHHHccccccccEEcccccccEcccccccHHHHHHHHHcccccccccccccccccEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccccHHHcccccEEEEEEcccccEEEEccccccccEEEEEccccEEEEEccccEEEEEcccccccc

MEVPVIDLAAYLsagegevgsEVSELCREVSGILRETgallvkdprctvednDRFLDMMEKYFespfhfkrlqerpnlhyqvgvtpegveiprslVDEEMQEKFRampkesqpsipigpdpkwrymwrvgprpsntrfqelnsepvipdgfpewKETMDSWGHKMISAIEVVAEMAAIgfglpkdaftslmkqgphllaptgcdlrrygkegtvfagyhydlnfltihgrsrfpglniwlrngkkvevkVPVGCLliqtgkqvnpy

MEVPVIDLAAylsagegevgseVSELCREVSGILretgallvkdprctvEDNDRFLDMMEKYFESPFHFKRLQERPNLhyqvgvtpegveiprSLVDEEMQEKframpkesqpsipigpdpkWRYMWRVGPRPsntrfqelnsepvipdgfpEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGclliqtgkqvnpy

MEVPVIDLAAYLSAgegevgsevseLCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY

****VIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQVGVTPE**********************************KWRYMWRVG***************VIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQT*******

MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYG****VFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY

MEVPVIDLAAYLSA**********ELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEK*********PSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY

*EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVN**

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		266
255544288		361	conserved hypothetical protein [Ricinus	0.988	0.728	0.821	1e-129
224059666		368	predicted protein [Populus trichocarpa]	0.988	0.714	0.797	1e-126
297795409		355	hypothetical protein ARALYDRAFT_917648 [	0.988	0.740	0.802	1e-125
225450201		365	PREDICTED: uncharacterized protein LOC10	0.988	0.720	0.798	1e-125
147844087		460	hypothetical protein VITISV_043972 [Viti	0.988	0.571	0.798	1e-124
449501563		363	PREDICTED: uncharacterized protein LOC10	0.988	0.724	0.785	1e-124
18422862		355	dioxygenase-like protein [Arabidopsis th	0.988	0.740	0.787	1e-123
118484419		286	unknown [Populus trichocarpa]	0.992	0.923	0.783	1e-123
449463773		363	PREDICTED: uncharacterized protein LOC10	0.988	0.724	0.781	1e-123
356544196		346	PREDICTED: uncharacterized protein LOC10	0.966	0.742	0.798	1e-122

>gi\|255544288\|ref\|XP_002513206.1\| conserved hypothetical protein [Ricinus communis] gi\|223547704\|gb\|EEF49197.1\| conserved hypothetical protein [Ricinus communis]	Back alignment and taxonomy information

 Score =  466 bits (1198), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 221/269 (82%), Positives = 240/269 (89%), Gaps = 6/269 (2%)

Query: 1   MEVPVIDLAAYLSAGEGEVGS------EVSELCREVSGILRETGALLVKDPRCTVEDNDR 54
           M++PVIDL  YL   +   G       EV ELC+EVS ILRETGAL+VKDPRC+ EDNDR
Sbjct: 1   MDIPVIDLTRYLEIADKLSGEPVKLCGEVEELCKEVSRILRETGALVVKDPRCSSEDNDR 60

Query: 55  FLDMMEKYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPS 114
           F+DMMEKYFESP  FK+LQERP+LHYQVGVTPEGVE+PRSLVDEEMQEK +AMPK+ QPS
Sbjct: 61  FIDMMEKYFESPLQFKKLQERPHLHYQVGVTPEGVEVPRSLVDEEMQEKLKAMPKQFQPS 120

Query: 115 IPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAE 174
            P GPD KWRYMWRVG RPSNTRF+ELNSEPV+P+GFPEWKETMDSWGHKMISAIE VAE
Sbjct: 121 TPKGPDRKWRYMWRVGSRPSNTRFKELNSEPVVPEGFPEWKETMDSWGHKMISAIEAVAE 180

Query: 175 MAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFP 234
           MAAIGFGLPKDAFTSLMKQGPHLLAPTG DLR YG+EGTVFAGYHYDLNFLTIHGRSRFP
Sbjct: 181 MAAIGFGLPKDAFTSLMKQGPHLLAPTGSDLRCYGEEGTVFAGYHYDLNFLTIHGRSRFP 240

Query: 235 GLNIWLRNGKKVEVKVPVGCLLIQTGKQV 263
           GLNIWLRNG+KVEVKVP+GCLLIQTGKQ+
Sbjct: 241 GLNIWLRNGQKVEVKVPLGCLLIQTGKQI 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224059666\|ref\|XP_002299960.1\| predicted protein [Populus trichocarpa] gi\|222847218\|gb\|EEE84765.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297795409\|ref\|XP_002865589.1\| hypothetical protein ARALYDRAFT_917648 [Arabidopsis lyrata subsp. lyrata] gi\|297311424\|gb\|EFH41848.1\| hypothetical protein ARALYDRAFT_917648 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|225450201\|ref\|XP_002264792.1\| PREDICTED: uncharacterized protein LOC100240969 [Vitis vinifera] gi\|297736215\|emb\|CBI24853.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147844087\|emb\|CAN80001.1\| hypothetical protein VITISV_043972 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449501563\|ref\|XP_004161404.1\| PREDICTED: uncharacterized protein LOC101225693 [Cucumis sativus]	Back alignment and taxonomy information

>gi|18422862|ref|NP_568689.1| dioxygenase-like protein [Arabidopsis thaliana] gi|10177753|dbj|BAB11066.1| unnamed protein product [Arabidopsis thaliana] gi|21593557|gb|AAM65524.1| unknown [Arabidopsis thaliana] gi|30725300|gb|AAP37672.1| At5g48020 [Arabidopsis thaliana] gi|110743713|dbj|BAE99693.1| hypothetical protein [Arabidopsis thaliana] gi|332008228|gb|AED95611.1| dioxygenase-like protein [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|118484419\|gb\|ABK94086.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449463773\|ref\|XP_004149606.1\| PREDICTED: uncharacterized protein LOC101207443 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356544196\|ref\|XP_003540540.1\| PREDICTED: uncharacterized protein LOC100790594 [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		266
TAIR\|locus:2162682		355	AT5G48020 "AT5G48020" [Arabido	0.988	0.740	0.771	2.5e-113
DICTYBASE\|DDB_G0267528		345	DDB_G0267528 [Dictyostelium di	0.943	0.727	0.513	1e-68

TAIR\|locus:2162682 AT5G48020 "AT5G48020" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
 Identities = 203/263 (77%), Positives = 225/263 (85%)

Query:     1 MEVPVIDLAAYLSAXXXXXXXXXXXLCREVSGILRETGALLVKDPRCTVEDNDRFLDMME 60
             ME+PV+DL++YL              CR+VS IL+ETGAL+VKDPRC  +DNDRF+DMME
Sbjct:     1 MELPVVDLSSYLDFSGDELGSDLLESCRQVSRILKETGALIVKDPRCCAQDNDRFIDMME 60

Query:    61 KYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPD 120
              YFE P  FKRLQ+RPNLHYQVG TPEGVE+PRSLVDEEMQEKF  MP E +P IP GPD
Sbjct:    61 NYFEKPDDFKRLQQRPNLHYQVGATPEGVEVPRSLVDEEMQEKFNTMPNEYKPHIPKGPD 120

Query:   121 PKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGF 180
              KWRYMWRVGPRPSNTRF+ELNSEPV+P+GFP W+E MDSWG+KMISA+EVVAEMAAIGF
Sbjct:   121 HKWRYMWRVGPRPSNTRFKELNSEPVVPEGFPGWEEVMDSWGYKMISAVEVVAEMAAIGF 180

Query:   181 GLPKDAFTSLMKQGPHLLAPTGCDLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLNIWL 240
             GLPKDAFTSLMKQGPHLLAPTG DL  Y +EGT+FAGYHYDLNFLTIHGRSRFPGL IWL
Sbjct:   181 GLPKDAFTSLMKQGPHLLAPTGSDLNCYNEEGTIFAGYHYDLNFLTIHGRSRFPGLYIWL 240

Query:   241 RNGKKVEVKVPVGCLLIQTGKQV 263
             RNG+KV VKVPVGCLLIQ GKQ+
Sbjct:   241 RNGEKVAVKVPVGCLLIQAGKQI 263

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

DICTYBASE\|DDB_G0267528 DDB_G0267528 [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		266
COG3491		322	COG3491, PcbC, Isopenicillin N synthase and relate	3e-12

>gnl\|CDD\|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only]	Back alignment and domain information

 Score = 65.1 bits (159), Expect = 3e-12
 Identities = 53/264 (20%), Positives = 86/264 (32%), Gaps = 34/264 (12%)

Query: 1   MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMME 60
            ++P+IDL+       G        + +E+    RE G   + +        D    +  
Sbjct: 4   RDLPIIDLSEL----AGSDPGARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALAR 59

Query: 61  KYFESPFHFKRLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPD 120
           ++F  P   K            G TP G E                  KE    + +GPD
Sbjct: 60  QFFALPVEEKLKILMVLGRQHRGYTPHGGE----------LTDGEPDYKEG---LDMGPD 106

Query: 121 PKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGF 180
                   +    + T     N  P IP      ++ +  +   M +    +    A+G 
Sbjct: 107 ----LDAELAGVRAGTPLHGPNLWPAIP----GLRDALLQYYRAMTAVGLRLLRAIALGL 158

Query: 181 GLPKDAFTSLMKQGPHLLAPTGCDLRRY----GKEGTVFAGYHYDLNFLTIHGRSRFPGL 236
            LP+D F         +       L RY     +EG    G H D   LT+  +    GL
Sbjct: 159 DLPEDFFDKRTSDPNSV-----LRLLRYPSRPAREGADGVGAHTDYGLLTLLFQDDVGGL 213

Query: 237 NIWLRNGKKVEVKVPVGCLLIQTG 260
            +   NG  ++V    G L++  G
Sbjct: 214 EVRPPNGGWLDVPPIPGTLVVNIG 237

Length = 322

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		266
COG3491		322	PcbC Isopenicillin N synthase and related dioxygen	100.0
PTZ00273		320	oxidase reductase; Provisional	100.0
PLN02485		329	oxidoreductase	100.0
PLN02276		361	gibberellin 20-oxidase	100.0
PLN02758		361	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN02515		358	naringenin,2-oxoglutarate 3-dioxygenase	100.0
PLN02216		357	protein SRG1	100.0
PLN03178		360	leucoanthocyanidin dioxygenase; Provisional	100.0
PLN02912		348	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN03002		332	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN00417		348	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN02393		362	leucoanthocyanidin dioxygenase like protein	100.0
PLN02254		358	gibberellin 3-beta-dioxygenase	100.0
PLN02750		345	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN02997		325	flavonol synthase	100.0
PLN02904		357	oxidoreductase	100.0
PLN02947		374	oxidoreductase	100.0
PLN02299		321	1-aminocyclopropane-1-carboxylate oxidase	100.0
PLN02639		337	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN02704		335	flavonol synthase	100.0
PLN02156		335	gibberellin 2-beta-dioxygenase	100.0
KOG0143		322	consensus Iron/ascorbate family oxidoreductases [S	100.0
PLN02984		341	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PLN02403		303	aminocyclopropanecarboxylate oxidase	100.0
PLN02365		300	2-oxoglutarate-dependent dioxygenase	100.0
PLN03001		262	oxidoreductase, 2OG-Fe(II) oxygenase family protei	100.0
PF14226		116	DIOX_N: non-haem dioxygenase in morphine synthesis	99.9
PLN03176		120	flavanone-3-hydroxylase; Provisional	99.77
PF03171		98	2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent	99.37
PF07350		416	DUF1479: Protein of unknown function (DUF1479); In	87.54

>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]	Back alignment and domain information

Probab=100.00  E-value=5.2e-58  Score=388.72  Aligned_cols=231  Identities=21%  Similarity=0.313  Sum_probs=207.7

Q ss_pred             CCCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCCCC
Q 024516            1 MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHY   80 (266)
Q Consensus         1 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~   80 (266)
                      ++||+|||+.+..++.    .++..++++|++||+++|||||+||||+..+++++++++++||+||.|+|.++.+.....
T Consensus         4 ~~lp~idls~~~~~~~----~~~~~~~~~l~~A~r~~GFf~l~~~~i~~~~~~~~~~~arqFFaLp~eeK~~~~~~~~~~   79 (322)
T COG3491           4 RDLPIIDLSELAGSDP----GARRRVAQELRAACREIGFFYLVNHGIDAALIDEAFALARQFFALPVEEKLKILMVLGRQ   79 (322)
T ss_pred             CcCceeccHHhcCCCc----HHHHHHHHHHHHHHHhCCEEEEeCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCcc
Confidence            4799999999988766    689999999999999999999999999999999999999999999999999999887666


Q ss_pred             ccccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCC----C-CccccCCCCCCCCCCCcchH
Q 024516           81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPS----N-TRFQELNSEPVIPDGFPEWK  155 (266)
Q Consensus        81 ~~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~n~wP~~~~~fr  155 (266)
                      +|||.+.+.|.+++.                         .+|+|.|+++..-.    + .......++|.|| ..|+||
T Consensus        80 ~rGY~~~~~E~t~g~-------------------------~d~kE~~d~g~~~~~~~~~~~~~~~~~gpN~wP-~ip~~r  133 (322)
T COG3491          80 HRGYTPHGGELTDGE-------------------------PDYKEGLDMGPDLDAELAGVRAGTPLHGPNLWP-AIPGLR  133 (322)
T ss_pred             ccccccCcccccCCc-------------------------cchhhhcccccccccccCCCccCCCcCCCCCCc-cchhHH
Confidence            799999999987554                         25788888886421    1 1223456899999 899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCChhhHHhhhhCCCCCCcccCCCccccCC----CCccceeeccccCceeEEecC
Q 024516          156 ETMDSWGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGK----EGTVFAGYHYDLNFLTIHGRS  231 (266)
Q Consensus       156 ~~~~~y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~~~~~~Yp~----~~~~~~~~HtD~~~lTll~q~  231 (266)
                      ..+..|+++|.+++.+||++||.+|+|++++|++.++++.+++|     +++||.    ++..+.++|||+|+||||+||
T Consensus       134 ~~ll~~~~~~~~~~~rLL~aiA~~LdL~~d~Fd~~~~d~~~~~R-----LlrYP~~~~~~~~~~~GaHtD~G~lTLl~Qd  208 (322)
T COG3491         134 DALLQYYRAMTAVGLRLLRAIALGLDLPEDFFDKRTSDPNSVLR-----LLRYPSRPAREGADGVGAHTDYGLLTLLFQD  208 (322)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhccCCchheEE-----EEecCCCcccccccccccccCCCeEEEEEec
Confidence            99999999999999999999999999999999999888899999     999994    346678999999999999999


Q ss_pred             CCCceEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516          232 RFPGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY  266 (266)
Q Consensus       232 ~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~  266 (266)
                      +++||||+++.|+|++|+|.||++|||+||+||.|
T Consensus       209 ~~~GLqv~~~~g~Wl~v~P~pgtlvVNiGdmLe~~  243 (322)
T COG3491         209 DVGGLEVRPPNGGWLDVPPIPGTLVVNIGDMLERW  243 (322)
T ss_pred             ccCCeEEecCCCCeeECCCCCCeEEEeHHHHHHHH
Confidence            99999999888999999999999999999999975

>PTZ00273 oxidase reductase; Provisional	Back alignment and domain information

>PLN02485 oxidoreductase	Back alignment and domain information

>PLN02276 gibberellin 20-oxidase	Back alignment and domain information

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase	Back alignment and domain information

>PLN02216 protein SRG1	Back alignment and domain information

>PLN03178 leucoanthocyanidin dioxygenase; Provisional	Back alignment and domain information

>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN02393 leucoanthocyanidin dioxygenase like protein	Back alignment and domain information

>PLN02254 gibberellin 3-beta-dioxygenase	Back alignment and domain information

>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN02997 flavonol synthase	Back alignment and domain information

>PLN02904 oxidoreductase	Back alignment and domain information

>PLN02947 oxidoreductase	Back alignment and domain information

>PLN02299 1-aminocyclopropane-1-carboxylate oxidase	Back alignment and domain information

>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN02704 flavonol synthase	Back alignment and domain information

>PLN02156 gibberellin 2-beta-dioxygenase	Back alignment and domain information

>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]	Back alignment and domain information

>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PLN02403 aminocyclopropanecarboxylate oxidase	Back alignment and domain information

>PLN02365 2-oxoglutarate-dependent dioxygenase	Back alignment and domain information

>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein	Back alignment and domain information

>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A	Back alignment and domain information

>PLN03176 flavanone-3-hydroxylase; Provisional	Back alignment and domain information

>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit	Back alignment and domain information

>PF07350 DUF1479: Protein of unknown function (DUF1479); InterPro: IPR010856 This family consists of several hypothetical Enterobacterial proteins, of around 420 residues in length	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		266
3oox_A		312	Putative 2OG-Fe(II) oxygenase family protein; stru	3e-11
1dcs_A		311	Deacetoxycephalosporin C synthase; ferrous oxygena	3e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1odm_A		331	Isopenicillin N synthase; antibiotic biosynthesis,	2e-06

>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312	Back alignment and structure

 Score = 61.5 bits (150), Expect = 3e-11
 Identities = 50/263 (19%), Positives = 82/263 (31%), Gaps = 44/263 (16%)

Query: 1   MEVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMME 60
             +  +  + Y          + +   +E+       G  ++ D        D  +D  +
Sbjct: 5   SAIDPVSFSLYAK--------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAK 56

Query: 61  KYFESPFHFKRLQERPNLHYQVGVTPEGVEI--PRSLVDEEMQEKFRAMPKESQPSIPIG 118
            +F  P   K+           G  P GVE        D           KE        
Sbjct: 57  AFFALPVETKKQYAGVK-GGARGYIPFGVETAKGADHYDL----------KEF------- 98

Query: 119 PDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAI 178
               W     + P          N   V P   P +K  +    + +      V E  A 
Sbjct: 99  ----WHMGRDLPPGHRFRAHMADN---VWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIAT 151

Query: 179 GFGLPKDAFTSLMKQGPHLLAPTGCDLRRY----GKEGTVFAGYHYDLNFLTIHGRSRFP 234
              L +D F   ++ G  +L      L  Y         V AG H D+N +T+   +   
Sbjct: 152 YLKLERDFFKPTVQDGNSVLR-----LLHYPPIPKDATGVRAGAHGDINTITLLLGAEEG 206

Query: 235 GLNIWLRNGKKVEVKVPVGCLLI 257
           GL +  R+G+ + +  P GCL+I
Sbjct: 207 GLEVLDRDGQWLPINPPPGCLVI 229

PyMOL of 3oox

>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		266
3oox_A		312	Putative 2OG-Fe(II) oxygenase family protein; stru	100.0
1gp6_A		356	Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep	100.0
1odm_A		331	Isopenicillin N synthase; antibiotic biosynthesis,	100.0
1w9y_A		319	1-aminocyclopropane-1-carboxylate oxidase 1; oxyge	100.0
1dcs_A		311	Deacetoxycephalosporin C synthase; ferrous oxygena	100.0
3on7_A		280	Oxidoreductase, iron/ascorbate family; structural	100.0
2dbn_A		461	Hypothetical protein YBIU; alpha/beta structure, s	81.22

>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}	Back alignment and structure

Probab=100.00  E-value=8.3e-57  Score=396.86  Aligned_cols=228  Identities=22%  Similarity=0.343  Sum_probs=199.4

Q ss_pred             CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCCCCc
Q 024516            2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLHYQ   81 (266)
Q Consensus         2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~   81 (266)
                      +||||||+.+.+        .+.+++++|++||+++|||||+||||+.++++++++.+++||+||.|+|.++... ...+
T Consensus         6 ~iPvIDls~~~~--------~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~   76 (312)
T 3oox_A            6 AIDPVSFSLYAK--------DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGA   76 (312)
T ss_dssp             SSCCEETHHHHH--------CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGT
T ss_pred             CCCeEEChHhcc--------cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCc
Confidence            599999999854        4678899999999999999999999999999999999999999999999999875 3456


Q ss_pred             cccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCC-CCCCccccCCCCCCCCCCCcchHHHHHH
Q 024516           82 VGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPR-PSNTRFQELNSEPVIPDGFPEWKETMDS  160 (266)
Q Consensus        82 ~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~n~wP~~~~~fr~~~~~  160 (266)
                      +||.+.|.|...+.                       ...+|+|.|+++.. +.+.++.....+|.||+.+|+||+++++
T Consensus        77 ~Gy~~~g~e~~~~~-----------------------~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~  133 (312)
T 3oox_A           77 RGYIPFGVETAKGA-----------------------DHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSW  133 (312)
T ss_dssp             SEEECCCCCCSTTS-----------------------CSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHH
T ss_pred             cccccccceecCCC-----------------------CCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHH
Confidence            99999888765322                       23468899988753 3333344455689999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChhhHHhhhhCCCCCCcccCCCccccCCC----CccceeeccccCceeEEecCCCCce
Q 024516          161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMKQGPHLLAPTGCDLRRYGKE----GTVFAGYHYDLNFLTIHGRSRFPGL  236 (266)
Q Consensus       161 y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr~~~~~~~~Yp~~----~~~~~~~HtD~~~lTll~q~~~~GL  236 (266)
                      |+++|.+++.+||++||++||+++++|.+.+..+.+.+|     ++|||++    ..+|+++|||+|+||||+||+++||
T Consensus       134 y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~lr-----~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GL  208 (312)
T 3oox_A          134 LYNSLDGMGGKVLEAIATYLKLERDFFKPTVQDGNSVLR-----LLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGL  208 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCTTTTHHHHTTCCCEEE-----EEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCcceee-----eEecCCCCCCcCCcCccceecCceEEEEeEcCcCce
Confidence            999999999999999999999999999999988888898     9999964    2489999999999999999999999


Q ss_pred             EEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516          237 NIWLRNGKKVEVKVPVGCLLIQTGKQVNPY  266 (266)
Q Consensus       237 qv~~~~g~W~~V~p~~g~~vVn~Gd~le~~  266 (266)
                      ||++++|+|++|+|+||++|||+||+||+|
T Consensus       209 qV~~~~g~W~~V~p~pg~~vVNiGD~l~~~  238 (312)
T 3oox_A          209 EVLDRDGQWLPINPPPGCLVINIGDMLERL  238 (312)
T ss_dssp             EEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred             EEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence            999899999999999999999999999975

PyMOL of 3oox

>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*	Back alignment and structure

>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...	Back alignment and structure

>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X	Back alignment and structure

>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*	Back alignment and structure

>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}	Back alignment and structure

>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		266
d1dcsa_		311	b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S	1e-09
d1w9ya1		307	b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla	3e-08
d1gp6a_		349	b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr	3e-08

>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311	Back information, alignment and structure


class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

 Score = 55.4 bits (132), Expect = 1e-09
 Identities = 40/268 (14%), Positives = 68/268 (25%), Gaps = 49/268 (18%)

Query: 2   EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEK 61
            VP   LA          G    E  R     LR+ G   + D   T  +     D++  
Sbjct: 4   TVPTFSLAELQQ------GLHQDEFRR----CLRDKGLFYLTDCGLTDTELKSAKDLVID 53

Query: 62  YFESPFHFK-RLQERPNLHYQVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPD 120
           +FE     + R    P    + G T    E    + +                      D
Sbjct: 54  FFEHGSEAEKRAVTSPVPTMRRGFTGLESESTAQITNTGSY-----------------SD 96

Query: 121 PKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDSWGHKMISAIEVVAEMAAIGF 180
               Y                           +++     +  +  +A   VA       
Sbjct: 97  YSMCYSMGTADNLFP---------------SGDFERIWTQYFDRQYTASRAVAREVLRAT 141

Query: 181 GLPKDAFTSLMKQGPHLLAPTGC---DLRRYGKEGTVFAGYHYDLNFLTIHGRSRFPGLN 237
           G   D           LL           R  +E  +    HYDL+ +T+  ++      
Sbjct: 142 GTEPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGF 201

Query: 238 IWL---RNGKKVEVKVPVGCLLIQTGKQ 262
           + L     G   ++      +L+  G  
Sbjct: 202 VSLQAEVGGAFTDLPYRPDAVLVFCGAI 229

PyMOL of d1dcsa_

>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307	Back information, alignment and structure

>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		266
d1gp6a_		349	Anthocyanidin synthase {Mouse-ear cress (Arabidops	100.0
d1dcsa_		311	Deacetoxycephalosporin C synthase {Streptomyces cl	100.0
d1w9ya1		307	1-aminocyclopropane-1-carboxylate oxidase 1 {Petun	100.0
d1odma_		329	Isopenicillin N synthase {Emericella nidulans [Tax	100.0
d2csga1		417	Hypothetical protein YbiU {Salmonella typhimurium	83.45

>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3e-49  Score=351.72  Aligned_cols=225  Identities=17%  Similarity=0.192  Sum_probs=183.3

Q ss_pred             CCCeeeccccccCCCCCCchhHHHHHHHHHHHhhhccEEEEeCCCCCHHHHHHHHHHHHhhcCCCcccccccccCCCC-C
Q 024516            2 EVPVIDLAAYLSAGEGEVGSEVSELCREVSGILRETGALLVKDPRCTVEDNDRFLDMMEKYFESPFHFKRLQERPNLH-Y   80 (266)
Q Consensus         2 ~iPvIDl~~l~~~~~~~~~~~~~~~~~~l~~A~~~~Gff~v~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~-~   80 (266)
                      +||||||+.|.++++    ..+..++++|++||+++|||||+||||+.++++++++++++||+||.|+|.++...... +
T Consensus        45 ~IPvIDls~l~~~d~----~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~  120 (349)
T d1gp6a_          45 QVPTIDLKNIESDDE----KIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK  120 (349)
T ss_dssp             CCCEEECTTTTCSCH----HHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred             CcCeEEChhcCCCCH----HHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCC
Confidence            699999999987665    67889999999999999999999999999999999999999999999999999765422 2


Q ss_pred             ccccccCCccCCCCCchHHHHHHHhhCCCCCCCCCCCCCCCCcccceecCCCCCCCccccCCCCCCCCCCCcchHHHHHH
Q 024516           81 QVGVTPEGVEIPRSLVDEEMQEKFRAMPKESQPSIPIGPDPKWRYMWRVGPRPSNTRFQELNSEPVIPDGFPEWKETMDS  160 (266)
Q Consensus        81 ~~Gy~~~g~e~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wP~~~~~fr~~~~~  160 (266)
                      +.||.....+...                         ...++.+.+.....+     .....+|.||+..+.|++.+++
T Consensus       121 ~~~~g~~~~~~~~-------------------------~~~~~~~~~~~~~~~-----~~~~~~n~wp~~~~~f~e~~~~  170 (349)
T d1gp6a_         121 IQGYGSKLANNAS-------------------------GQLEWEDYFFHLAYP-----EEKRDLSIWPKTPSDYIEATSE  170 (349)
T ss_dssp             CSEEECCCCCSTT-------------------------CCCCSCEEEEEEEES-----GGGCCGGGSCCSSTTHHHHHHH
T ss_pred             ccccccccccccc-------------------------cccchhhhhcccccc-----cccccccccccccchHHHHHHH
Confidence            3344322222111                         122343332111111     1233568999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCChhhHHhhhh---CCCCCCcccCCCccccCCC----CccceeeccccCceeEEecCCC
Q 024516          161 WGHKMISAIEVVAEMAAIGFGLPKDAFTSLMK---QGPHLLAPTGCDLRRYGKE----GTVFAGYHYDLNFLTIHGRSRF  233 (266)
Q Consensus       161 y~~~~~~~a~~ll~~la~~Lgl~~~~f~~~~~---~~~~~lr~~~~~~~~Yp~~----~~~~~~~HtD~~~lTll~q~~~  233 (266)
                      |++.|.+++.+|+++++++||+++++|.+.+.   ...+.+|     ++|||+.    ..+|+++|||+|+||||+|+.+
T Consensus       171 ~~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~~~~~~~~~lr-----l~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~  245 (349)
T d1gp6a_         171 YAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMK-----INYYPKCPQPELALGVEAHTDVSALTFILHNMV  245 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEE-----EEEECCCSSTTTCCSEEEECCCSSEEEEEECSC
T ss_pred             HHHHHHHHHHhhhHHHHHHcCCCHHHHHHHhccccccceeee-----ecccccccchhhccccccCCCCcceEEEeccCC
Confidence            99999999999999999999999999988764   2345677     9999963    4789999999999999999999


Q ss_pred             CceEEecCCCcEEEccCCCCeEEEecCccccCC
Q 024516          234 PGLNIWLRNGKKVEVKVPVGCLLIQTGKQVNPY  266 (266)
Q Consensus       234 ~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~le~~  266 (266)
                      +||||+ ++|+|++|+|.+|++|||+||+||+|
T Consensus       246 ~GLqv~-~~g~W~~V~p~~~a~vVNvGD~l~~~  277 (349)
T d1gp6a_         246 PGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEIL  277 (349)
T ss_dssp             CCEEEE-ETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred             cceeee-cCCceEEccCCCCCeeeeHHhHHHHH
Confidence            999996 68999999999999999999999975

PyMOL of d1gp6a_

>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]}	Back information, alignment and structure

>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]}	Back information, alignment and structure

>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]}	Back information, alignment and structure

>d2csga1 b.82.2.12 (A:3-419) Hypothetical protein YbiU {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure