Citrus Sinensis ID: 024541


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
MYASAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKAFPQSWWQLLLMLALPPILNIQALF
cEEEEEEEEEEEcccccccccEEccccccccccEEEccccEEEEEccccccEEEEcccccccccccccccccccccccccccccccccEEEEEEEcccEEcccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccEEEEccccEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcc
ccccEEEEEEEEcccccEEccEcccccccccccEEcccccEEEEEcccccccEEEEEccccccccccEEEccccccEEEEccccccccEEEEEEEcccccEEEEEEEccccccEEEEEccccccccccccccccccHccHHcEEcccccEEEEccHHHHHccccccccccccccccccccHHHHHHHHHccccEEcEccccccEEEcccccEEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcc
myasaknitlVNVCqetiwpgiitqggnyhgdgftlkpgqsasynppdgwsgriwartgcnfnnstsscktgscgssinctspgslpvtIAEFtlganvdyydvslvdgfnvpvlvrpfngkgncsnagcdgdlrqncpsdlavkdngkvigcrsacdafnsdeycckgafgdltsclasnysksfkqvcpaassyafddrtsiitcsaTDYIVGFCasrnqtvcsyhdnklfcneskgskafpQSWWQLLLMLAlppilniqalf
myasaknitlvNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKAFPQSWWQLLLMLALPPILNIQALF
MYASAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFnnstsscktgscgssINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKAFPQSWWQlllmlalppilNIQALF
******NITLVNVCQETIWPGIITQGGNYHGDGFTLKP*****YNPPDGWSGRIWARTGCNFNNSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKAFPQSWWQLLLMLALPPILNIQA**
**ASAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFC*******************************QLLLMLALPPILNIQALF
MYASAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNST********GSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKAFPQSWWQLLLMLALPPILNIQALF
*YASAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASR********************KAFPQSWWQLLLMLALPPILNIQALF
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oooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MYASAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKAFPQSWWQLLLMLALPPILNIQALF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query266 2.2.26 [Sep-21-2011]
P50699243 Thaumatin-like protein OS no no 0.830 0.909 0.484 1e-52
P28493239 Pathogenesis-related prot no no 0.796 0.887 0.488 1e-50
Q53MB8253 Thaumatin-like protein OS no no 0.793 0.833 0.429 2e-43
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.808 0.884 0.426 5e-43
Q41350252 Osmotin-like protein OS=S N/A no 0.789 0.833 0.434 5e-43
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.808 0.873 0.424 2e-40
P83332246 Thaumatin-like protein 1 N/A no 0.808 0.873 0.433 2e-40
O80327244 Thaumatin-like protein 1 N/A no 0.800 0.872 0.427 2e-37
P81295225 Pathogenesis-related prot N/A no 0.721 0.853 0.433 2e-37
P83336212 Thaumatin-like protein 1b N/A no 0.755 0.948 0.423 4e-37
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function desciption
 Score =  206 bits (525), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 110/227 (48%), Positives = 135/227 (59%), Gaps = 6/227 (2%)

Query: 2   YASAKNITLVNVCQETIWPGIITQGGN--YHGDGFTLKPGQSASYNPPDGWSGRIWARTG 59
           +ASA  +   N C+  +WPGI    G     G GF L   ++ S   P  WSGR W R G
Sbjct: 17  HASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHG 76

Query: 60  CNFNNS-TSSCKTGSCGSSINCT-SPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVR 117
           C F+ S    C TG CG S++C  + G  P T+AE TLG  +D+YDVSLVDG+N+ + + 
Sbjct: 77  CTFDRSGRGHCATGDCGGSLSCNGAGGEPPATLAEITLGPELDFYDVSLVDGYNLAMSIM 136

Query: 118 PFNGKGNCSNAGCDGDLRQNCPSDLAVKD-NGK-VIGCRSACDAFNSDEYCCKGAFGDLT 175
           P  G G CS AGC  DL Q CP  L V+  NGK V+ C+SAC AFNS +YCC G FG+  
Sbjct: 137 PVKGSGQCSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQ 196

Query: 176 SCLASNYSKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQ 222
           SC  + YSK FK  CP A SYA+DD TSI TCS  +YIV FC     
Sbjct: 197 SCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYIVTFCPHHRH 243





Arabidopsis thaliana (taxid: 3702)
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|Q41350|OLP1_SOLLC Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1 Back     alignment and function description
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P81295|PRR3_JUNAS Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
359486080289 PREDICTED: thaumatin-like protein-like [ 0.966 0.889 0.623 2e-92
255575400290 Protein P21, putative [Ricinus communis] 0.977 0.896 0.637 3e-91
224151592218 predicted protein [Populus trichocarpa] 0.804 0.981 0.706 1e-84
224084854281 predicted protein [Populus trichocarpa] 0.954 0.903 0.571 9e-84
356550834287 PREDICTED: pathogenesis-related protein 0.977 0.905 0.549 5e-83
357488995282 Pathogenesis-related protein [Medicago t 0.943 0.890 0.555 7e-82
449464488291 PREDICTED: thaumatin-like protein-like [ 0.898 0.821 0.604 1e-81
224070497217 predicted protein [Populus trichocarpa] 0.804 0.986 0.699 2e-81
224054272205 predicted protein [Populus trichocarpa] 0.763 0.990 0.715 2e-81
302141860308 unnamed protein product [Vitis vinifera] 0.954 0.824 0.554 5e-81
>gi|359486080|ref|XP_002273271.2| PREDICTED: thaumatin-like protein-like [Vitis vinifera] gi|298204583|emb|CBI23858.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 162/260 (62%), Positives = 202/260 (77%), Gaps = 3/260 (1%)

Query: 4   SAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFN 63
           SA   T+VN C ET+WPGIIT G N+HG GF LKPGQSA +   D W GRIW RTGC+F+
Sbjct: 27  SATTFTIVNDCNETVWPGIITPGLNFHGGGFALKPGQSAIFTAADVWGGRIWGRTGCSFD 86

Query: 64  -NSTSSCKTGSCGSSINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGK 122
            N +  C+TG+CG+++NCTSPG  P +IAEF LG ++DYYDVSLVDGFN+P+ + P  G 
Sbjct: 87  KNGSGKCQTGACGTTLNCTSPGKPPASIAEFNLG-DIDYYDVSLVDGFNLPITITPMKGT 145

Query: 123 GNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNY 182
            NCS AGCD DLRQ CPS+LA+K +GK+I C+SAC+AFN+D+YCC+GA+G+  SC+A+NY
Sbjct: 146 VNCSVAGCDADLRQKCPSELALKTDGKIIACKSACEAFNTDQYCCRGAYGNPISCVATNY 205

Query: 183 SKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASRNQTVCSYHDNKLFCNESKGSKA 242
           S+SFKQ CP A SYAFDD TSI+TC+A +YIV FC SRNQT CSYHD KL CN SKGSK 
Sbjct: 206 SRSFKQACPVAYSYAFDDPTSILTCNAPEYIVTFCPSRNQTACSYHDKKLNCNASKGSKE 265

Query: 243 FPQSWWQLLLMLALPPILNI 262
              +WW LL+ L L  ++N+
Sbjct: 266 LSHTWWWLLI-LPLASMINL 284




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575400|ref|XP_002528602.1| Protein P21, putative [Ricinus communis] gi|223531947|gb|EEF33760.1| Protein P21, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224151592|ref|XP_002337123.1| predicted protein [Populus trichocarpa] gi|222838322|gb|EEE76687.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224084854|ref|XP_002307423.1| predicted protein [Populus trichocarpa] gi|222856872|gb|EEE94419.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356550834|ref|XP_003543788.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|357488995|ref|XP_003614785.1| Pathogenesis-related protein [Medicago truncatula] gi|355516120|gb|AES97743.1| Pathogenesis-related protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449464488|ref|XP_004149961.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] gi|449497663|ref|XP_004160466.1| PREDICTED: thaumatin-like protein-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224070497|ref|XP_002303159.1| predicted protein [Populus trichocarpa] gi|222840591|gb|EEE78138.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224054272|ref|XP_002298177.1| predicted protein [Populus trichocarpa] gi|222845435|gb|EEE82982.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|302141860|emb|CBI19063.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
TAIR|locus:2203236356 AT1G77700 "AT1G77700" [Arabido 0.808 0.603 0.564 7.2e-68
TAIR|locus:2037227246 AT1G75050 "AT1G75050" [Arabido 0.823 0.890 0.453 1.2e-51
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.819 0.886 0.448 5.1e-51
TAIR|locus:2037235239 PR5 "AT1G75040" [Arabidopsis t 0.800 0.891 0.467 8.3e-51
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.808 0.870 0.446 4.6e-50
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.778 0.796 0.460 5.2e-49
TAIR|locus:2027864264 AT1G73620 [Arabidopsis thalian 0.827 0.833 0.442 5.2e-49
TAIR|locus:2194344244 ATLP-1 [Arabidopsis thaliana ( 0.808 0.881 0.457 6.7e-49
TAIR|locus:2121189345 AT4G38660 "AT4G38660" [Arabido 0.883 0.681 0.434 1.1e-48
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.838 0.740 0.420 3.3e-47
TAIR|locus:2203236 AT1G77700 "AT1G77700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 689 (247.6 bits), Expect = 7.2e-68, P = 7.2e-68
 Identities = 123/218 (56%), Positives = 154/218 (70%)

Query:     4 SAKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFX 63
             SA+  T++N C +TIWP I T G N++G GF LKPGQS  ++ P GWSGRIW RTGC F 
Sbjct:    87 SARVFTIINSCDQTIWPAI-TPGENFNGGGFELKPGQSIVFHAPVGWSGRIWGRTGCKFD 145

Query:    64 XXXXXXXXXXX-XXXINCTSPGSLPVTIAEFTLGANVDYYDVSLVDGFNVPVLVRPFNGK 122
                            + C++ G  P ++AEFTL A +D+YDVSLVDGFN+P+ V P NGK
Sbjct:   146 STGTGTCETGSCGSTLKCSASGKPPASLAEFTLAA-LDFYDVSLVDGFNLPMSVTPMNGK 204

Query:   123 GNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNY 182
             GNCS AGC  DLR +CP +LAVK NGKVI CRSACD F+ DEYCC+G +G+   C  + Y
Sbjct:   205 GNCSVAGCVADLRPHCPQELAVKSNGKVISCRSACDVFDRDEYCCRGVYGNPVVCQPTYY 264

Query:   183 SKSFKQVCPAASSYAFDDRTSIITCSATDYIVGFCASR 220
             SK FKQ CP A SYA+DD TSI+TC+A+DY++ FC+SR
Sbjct:   265 SKIFKQACPTAYSYAYDDPTSIMTCTASDYVISFCSSR 302




GO:0003674 "molecular_function" evidence=ND
GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
TAIR|locus:2037227 AT1G75050 "AT1G75050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037235 PR5 "AT1G75040" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027864 AT1G73620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2194344 ATLP-1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-95
pfam00314212 pfam00314, Thaumatin, Thaumatin family 2e-87
smart00205218 smart00205, THN, Thaumatin family 4e-71
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 7e-39
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 6e-34
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 3e-30
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 2e-26
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  279 bits (717), Expect = 1e-95
 Identities = 110/218 (50%), Positives = 145/218 (66%), Gaps = 8/218 (3%)

Query: 8   ITLVNVCQETIWPGIITQGGNYH--GDGFTLKPGQSASYNPPDGWSGRIWARTGCNFNNS 65
            T+ N C  T+WPGI+   G+    G GF L PGQS + + P GWSGR W RTGC+F++S
Sbjct: 2   FTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSS 61

Query: 66  -TSSCKTGSCGSSINC-TSPGSLPVTIAEFTLGAN--VDYYDVSLVDGFNVPVLVRPFNG 121
              SC TG CG  + C  + G+ P T+AEFTLG +   D+YDVSLVDG+N+PV + P  G
Sbjct: 62  GKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGG 121

Query: 122 KGNCSNAGCDGDLRQNCPSDLAVKDN-GKVIGCRSACDAFNSDEYCCKGAFGDLTSCLAS 180
            G C  AGC  DL   CP++L VK++ G+V+ C+SAC AFN+DEYCC+GA+G   +C  +
Sbjct: 122 SGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLAFNTDEYCCRGAYGTPETCKPT 181

Query: 181 NYSKSFKQVCPAASSYAFDDRTSIITCS-ATDYIVGFC 217
            YS+ FK  CP A SYA+DD TS  TCS   +Y++ FC
Sbjct: 182 TYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC 219


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 266
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 96.97
cd09216353 GH64-LPHase-like glycoside hydrolase family 64: la 93.57
cd09220369 GH64-GluB-like glycoside hydrolase family 64: beta 92.33
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=5.1e-83  Score=570.64  Aligned_cols=211  Identities=51%  Similarity=1.117  Sum_probs=197.6

Q ss_pred             EEEEEeCCCCceeceeecCC--CccCCCceEecCCCceeecCCCCCeeEEeeecccccC-CCCCCcccCCCCCceecCC-
Q 024541            7 NITLVNVCQETIWPGIITQG--GNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFN-NSTSSCKTGSCGSSINCTS-   82 (266)
Q Consensus         7 t~ti~N~C~~tVWpg~~~~~--~~~~~~G~~L~pG~s~s~~vp~~WsGriWaRTgCs~d-~g~~~C~TGdCgg~l~C~~-   82 (266)
                      +|||+|||+||||||++...  ..+.++||+|+||++++|++|++|+|||||||||+|| .|+++|+||||++.|+|.+ 
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            59999999999999975432  2456799999999999999999999999999999999 7999999999999999986 


Q ss_pred             CCCCCceeEEEEec--CCccccccccccccccceeeecCCCCCCCCCCCCccccccCCCCccccc-cCCeeeeccccccc
Q 024541           83 PGSLPVTIAEFTLG--ANVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVK-DNGKVIGCRSACDA  159 (266)
Q Consensus        83 ~g~pPaTlaEftl~--~~~d~YDVSlVdGfNlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~-~~G~vv~C~SaC~~  159 (266)
                      .|.||+|||||+|+  +++|||||||||||||||+|.|+++.+.|+.++|.+|||..||.||+|+ .+|+||||+|||++
T Consensus        81 ~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~~g~vv~C~SaC~~  160 (219)
T cd09218          81 GGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNSGGRVVACKSACLA  160 (219)
T ss_pred             CCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccCCCcEeeecCHHHh
Confidence            56899999999998  4689999999999999999999876678999999999999999999998 45889999999999


Q ss_pred             cCCCcccccCCCCCCCCCCCCchhhHHhccCCCccccccCCCCCeeeecC-CCeEEEec
Q 024541          160 FNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSA-TDYIVGFC  217 (266)
Q Consensus       160 ~~~d~yCC~G~~~~p~~C~pt~ys~~FK~~CP~AYsya~DD~ts~ftC~~-~~Y~VtFC  217 (266)
                      |++|||||+|+|++|++|+|+.||++||++||+||+|||||++|+|+|.+ ++|+||||
T Consensus       161 f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP~Aysya~Dd~~s~~tC~~~~~Y~I~FC  219 (219)
T cd09218         161 FNTDEYCCRGAYGTPETCKPTTYSRLFKNACPQAYSYAYDDPTSTFTCSSGANYVITFC  219 (219)
T ss_pred             hCCccceecCCCCCCCcCCCcchhHHHHhhCccccccCCCCCCcceEcCCCCCEEEEeC
Confidence            99999999999999999999999999999999999999999999999985 69999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 5e-37
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 2e-33
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 2e-28
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-26
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 2e-24
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 7e-24
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 1e-23
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 2e-23
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 5e-21
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 5e-21
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 7e-21
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 7e-21
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 8e-21
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 3e-20
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 2e-19
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 3e-09
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 88/220 (40%), Positives = 116/220 (52%), Gaps = 9/220 (4%) Query: 7 NITLVNVCQETIWPGIIT--QGGNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFXX 64 IT N C T+WPG +T Q GF L S S + P WSGR W RT C+ Sbjct: 2 KITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDA 61 Query: 65 XXXXXXXXXX--XXXINCTSPGSLP-VTIAEFTLGAN--VDYYDVSLVDGFNVPVLVRPF 119 + C G++P T+ E T+ AN DYYDVSLVDGFN+P+ V P Sbjct: 62 AGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQ 121 Query: 120 NGKGNCSNAGCDGDLRQNCPSDLAVKD-NGKVIGCRSACDAFNSDEYCCKGAFGDLTSCL 178 G G C + C ++ + CP+ L VK +G VI C+SAC AF +YCC +C Sbjct: 122 GGTGECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCP 181 Query: 179 ASNYSKSFKQVCPAASSYAFDDRTSIITCS-ATDYIVGFC 217 + YS+ F++ CP A SYA+DD+ S TCS DY++ FC Sbjct: 182 PTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 221
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 2e-55
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 4e-54
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 6e-52
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 3e-46
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 6e-46
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 3e-32
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  176 bits (447), Expect = 2e-55
 Identities = 83/219 (37%), Positives = 112/219 (51%), Gaps = 9/219 (4%)

Query: 8   ITLVNVCQETIWPGIITQGGNYH--GDGFTLKPGQSASYNPPDGWSGRIWARTGCNFN-N 64
           I+  N C   +WPG +T          GF L    S   + P  W+GR WARTGC+ + +
Sbjct: 3   ISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDAS 62

Query: 65  STSSCKTGSCGSSINC--TSPGSLPVTIAEFTLGA--NVDYYDVSLVDGFNVPVLVRPFN 120
               C T  C S       +    P T+AEF + A    D+YDVSLVDGFN+P+ V P  
Sbjct: 63  GKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQG 122

Query: 121 GKGNCSNAGCDGDLRQNCPSDLAVKD-NGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLA 179
           G G+C  A C  ++   CPS+L  K  +G V+ C SAC  F + +YCC        +C  
Sbjct: 123 GTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPP 182

Query: 180 SNYSKSFKQVCPAASSYAFDDRTSIITC-SATDYIVGFC 217
           +NYS+ F   CP A SYA+DD+    TC    +Y + FC
Sbjct: 183 TNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 221


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query266
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A367 Laminaripentaose-producing beta-1,3-guluase (lphas 91.61
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=1.1e-86  Score=594.24  Aligned_cols=213  Identities=39%  Similarity=0.862  Sum_probs=200.5

Q ss_pred             eEEEEEeCCCCceeceeecC-C-CccCCCceEecCCCceeecCCCCCeeEEeeecccccC-CCCCCcccCCCC-CceecC
Q 024541            6 KNITLVNVCQETIWPGIITQ-G-GNYHGDGFTLKPGQSASYNPPDGWSGRIWARTGCNFN-NSTSSCKTGSCG-SSINCT   81 (266)
Q Consensus         6 ~t~ti~N~C~~tVWpg~~~~-~-~~~~~~G~~L~pG~s~s~~vp~~WsGriWaRTgCs~d-~g~~~C~TGdCg-g~l~C~   81 (266)
                      ++|||+|+|+||||||++.. + .++.++||+|+||++++|.+|++|+|||||||||+|| .|+++|+||||| +.|+|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            58999999999999997642 2 3457899999999999999999999999999999999 789999999999 999999


Q ss_pred             C-CCCCCceeEEEEecC--CccccccccccccccceeeecCCCCCCCCCCCCccccccCCCCcccccc-CCeeeeccccc
Q 024541           82 S-PGSLPVTIAEFTLGA--NVDYYDVSLVDGFNVPVLVRPFNGKGNCSNAGCDGDLRQNCPSDLAVKD-NGKVIGCRSAC  157 (266)
Q Consensus        82 ~-~g~pPaTlaEftl~~--~~d~YDVSlVdGfNlP~~i~p~~g~~~C~~~~C~~dln~~CP~~l~v~~-~G~vv~C~SaC  157 (266)
                      + .+.||+|||||+|+.  ++|||||||||||||||+|+|++|.+.|+.++|.+|||..||.||||++ +|++|||+|||
T Consensus        81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~~G~~v~C~saC  160 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGSDGSVVACLSAC  160 (222)
T ss_dssp             TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECTTSCEEEECCHH
T ss_pred             CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecCCCcEecccccc
Confidence            8 679999999999983  6999999999999999999999876789999999999999999999974 68999999999


Q ss_pred             cccCCCcccccCCCCCCCCCCCCchhhHHhccCCCccccccCCCCCeeeecCC-CeEEEecC
Q 024541          158 DAFNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSAT-DYIVGFCA  218 (266)
Q Consensus       158 ~~~~~d~yCC~G~~~~p~~C~pt~ys~~FK~~CP~AYsya~DD~ts~ftC~~~-~Y~VtFCP  218 (266)
                      ++|++|||||+|+|++|++|+|+.||++||++||+||||||||++|+|||++. +|+|||||
T Consensus       161 ~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP~AYsYa~DD~tstftC~~~~~y~itFCP  222 (222)
T 2ahn_A          161 VKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP  222 (222)
T ss_dssp             HHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCTTSBCSTTCTTTTCSEEESCCEEEEEECC
T ss_pred             cccCCCccccCCCCCCCCCCCcchHHHHHhhcCcccccCCCCCCCcCeEcCCCCCEEEEeCc
Confidence            99999999999999999999999999999999999999999999999999865 99999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 266
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-64
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 8e-63
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 1e-60
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Thaumatin
species: Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]
 Score =  198 bits (504), Expect = 2e-64
 Identities = 75/215 (34%), Positives = 102/215 (47%), Gaps = 14/215 (6%)

Query: 8   ITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYN-PPDGWSGRIWARTGCNFNNS- 65
             +VN C  T+W             G  L  G+S + N  P    G+IWART C F++S 
Sbjct: 3   FEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSG 62

Query: 66  TSSCKTGSCGSSINCTSPGSLPVTIAEFTLGAN-VDYYDVSLVDGFNVPVLVRPFNGKGN 124
           +  CKTG CG  + C   G  P T+AEF+L     DY D+S + GFNVP+   P      
Sbjct: 63  SGICKTGDCGGLLRCKRFGRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTR--G 120

Query: 125 CSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDAFNSDEYCCKGAFGDLTSCLASNYSK 184
           C    C  D+   CP+ L     G    C  AC  F + EYCC         C  + YS+
Sbjct: 121 CRGVRCAADIVGQCPAKLKAPGGG----CNDACTVFQTSEYCCTTG-----KCGPTEYSR 171

Query: 185 SFKQVCPAASSYAFDDRTSIITCSATDYIVGFCAS 219
            FK++CP A SY  D  T++    +++Y V FC +
Sbjct: 172 FFKRLCPDAFSYVLDKPTTVTCPGSSNYRVTFCPT 206


>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query266
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Pathogenesis-related protein 5d
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=100.00  E-value=4e-80  Score=545.13  Aligned_cols=201  Identities=39%  Similarity=0.835  Sum_probs=187.3

Q ss_pred             ceEEEEEeCCCCceeceeecCCCccCCCceEecCCCceeecCCCCC-eeEEeeecccccC-CCCCCcccCCCCCceecCC
Q 024541            5 AKNITLVNVCQETIWPGIITQGGNYHGDGFTLKPGQSASYNPPDGW-SGRIWARTGCNFN-NSTSSCKTGSCGSSINCTS   82 (266)
Q Consensus         5 a~t~ti~N~C~~tVWpg~~~~~~~~~~~G~~L~pG~s~s~~vp~~W-sGriWaRTgCs~d-~g~~~C~TGdCgg~l~C~~   82 (266)
                      +.+|||+|||+||||||+ ++    .++||+|+||++++|.+|++| +|||||||||+|| .|+++|+|||||+.|+|++
T Consensus         1 ~~~fti~N~C~~TVWp~~-~p----~~gg~~L~~g~s~~~~~p~~~~~gRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~~   75 (208)
T d1auna_           1 SGVFEVHNNCPYTVWAAA-TP----VGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKG   75 (208)
T ss_dssp             CCEEEEEECSSSCEEEEE-ET----TTEEEEECTTCEEEEECCTTCCSEEEEEEEEEEECTTSBEEEEESCCTTBSSCSS
T ss_pred             CCEEEEEeCCCCCccccc-cc----CCCCcccCCCCceEEECCCCCcccceeecCCCCcCCCCccceeccCcCCeEecCC
Confidence            469999999999999995 44    257999999999999999998 5999999999999 8899999999999999999


Q ss_pred             CCCCCceeEEEEec--CCccccccccccccccceeeecCCC-CCCCCCCCCccccccCCCCccccccCCeeeeccccccc
Q 024541           83 PGSLPVTIAEFTLG--ANVDYYDVSLVDGFNVPVLVRPFNG-KGNCSNAGCDGDLRQNCPSDLAVKDNGKVIGCRSACDA  159 (266)
Q Consensus        83 ~g~pPaTlaEftl~--~~~d~YDVSlVdGfNlP~~i~p~~g-~~~C~~~~C~~dln~~CP~~l~v~~~G~vv~C~SaC~~  159 (266)
                      .|.||+|||||||+  +++|||||||||||||||+|+|.++ .+.|+.++|.+|||..||.||||+.     ||+|||.+
T Consensus        76 ~G~pP~TlaEftl~~~~~~DfYDvSlVDGfNlP~~i~P~~~~~~~C~~~~C~~dln~~CP~~L~v~~-----~C~saC~~  150 (208)
T d1auna_          76 WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPG-----GCNNPCTT  150 (208)
T ss_dssp             CCCSSCCEEEEEEEEGGGEEEEEEECTTCBSSCEEEEESSCCSTTCSCEEECSCHHHHCCTTTEETT-----EECCHHHH
T ss_pred             CCCCCcceEEEEeccCCCcceeccccccccccceEEeccCCCCCCcCcccccCCccccCCHhhccCC-----CCccceee
Confidence            99999999999998  4689999999999999999999863 5689999999999999999999863     89999999


Q ss_pred             cCCCcccccCCCCCCCCCCCCchhhHHhccCCCccccccCCCCCeeeecC--CCeEEEecCCC
Q 024541          160 FNSDEYCCKGAFGDLTSCLASNYSKSFKQVCPAASSYAFDDRTSIITCSA--TDYIVGFCASR  220 (266)
Q Consensus       160 ~~~d~yCC~G~~~~p~~C~pt~ys~~FK~~CP~AYsya~DD~ts~ftC~~--~~Y~VtFCP~~  220 (266)
                      |++|||||+     +++|+|++||++||++||+||||||||++|+|||++  ++|+|||||.+
T Consensus       151 ~~~~~~CCt-----~~~C~pt~ys~~FK~~CP~AYsYa~Dd~sstftC~~g~~~Y~VtFCP~g  208 (208)
T d1auna_         151 FGGQQYCCT-----QGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCPYG  208 (208)
T ss_dssp             TCSHHHHCT-----TSCCCCCHHHHHHHHHCTTSBCSTTCCTTTCEEEETTSCCEEEEESTTC
T ss_pred             cCCCccccC-----CCcCCCchHHHHHHhhCCcccccCcCCCCcceEcCCCCCCEEEEeCCCC
Confidence            999999997     468999999999999999999999999999999975  68999999975



>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure