Citrus Sinensis ID: 024555


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260------
MICPSLLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIVET
cccccccccccEEEEEEEEcccccccHHHHHHHHHHHHccccccHHHHHHHHHcccccEEEEEEccccccccEEEEEEEccccccccHHHHHHHHHHHHHcccccHHHHHHHHHccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHcccccHHHHcccccEEEEEEEEEEEcccccHHHHHHHHHHHcccccccccccccccHHHHHHHccEEEEEEEcccccccHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHcc
cccccHcccccEEEEEEEEccccccHHHHHHHHHHHHHHcccccHHHHHHHHHccccEEEEEEEccccccccEEEEEEEEcHHccccHHHHHHHHHHHHHccccHHHHHHHHHHccccccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccHHHHcccccccEEEEEEEEEEEEcccccccccccccccccccccccEEEccHHHHHHHHHcEEEEEEEccccccccccccccccccEEEEEcHHHHHHHHHHHHHHHccc
micpsllkkkgvvqadfvffdpkpddfhGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVkiegdddntpfSIVTAlnlrrykdHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQrvvnlppqllpplydALFDEvswatedepteelrnfFCFKCYLLVSKIYKLKHKNAnqknkrnlkrrsasdsgdeivyikpedeiFHKLslwsfsfpmqtqQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIVET
micpsllkkkgvvqADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVvkiegdddntpfsivtalnlrrykdHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKhknanqknkrnlkrrsasdsgdeivYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIVET
MICPSLLKKKGVVQAdfvffdpkpddfHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNlppqllpplYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIVET
*****LLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLK***********************IVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQEL*******
*******KKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLK******************ANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATED****ELRNFFCFKCYLLVSK*****************************VYIKPEDEIFHKLSLWSFSF***************RLMGLVMAVEAAKIPTFRQELQSLI***
MICPSLLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNA****************GDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIVET
MICPSLLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHK*******************DEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIV**
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MICPSLLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLIVET
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query266 2.2.26 [Sep-21-2011]
O64885326 Protein BCCIP homolog OS= yes no 0.917 0.748 0.657 6e-84
Q4WVS2291 Protein bcp1 OS=Neosartor yes no 0.770 0.704 0.347 1e-31
Q2U600290 Protein bcp1 OS=Aspergill yes no 0.736 0.675 0.370 6e-30
O74907282 Protein bcp1 OS=Schizosac yes no 0.770 0.726 0.331 1e-27
Q5AXW5290 Protein bcp1 OS=Emericell yes no 0.902 0.827 0.307 2e-27
Q4HZK7285 Protein BCP1 OS=Gibberell yes no 0.860 0.803 0.289 7e-24
Q2H137291 Protein BCP1 OS=Chaetomiu N/A no 0.898 0.821 0.285 7e-23
Q7S8R3293 Protein bcp-1 OS=Neurospo N/A no 0.879 0.798 0.299 2e-22
Q6BII5307 Protein BCP1 OS=Debaryomy yes no 0.642 0.557 0.321 8e-21
Q6C7K5302 Protein BCP1 OS=Yarrowia yes no 0.781 0.688 0.284 6e-20
>sp|O64885|BCCIP_ARATH Protein BCCIP homolog OS=Arabidopsis thaliana GN=At2g44510 PE=1 SV=2 Back     alignment and function desciption
 Score =  310 bits (794), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 165/251 (65%), Positives = 198/251 (78%), Gaps = 7/251 (2%)

Query: 13  VQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTP 72
           VQADF FFDPKP DFHGVKILLQ YLDD +WDLS FVD IL QTTVGTVVK+  D+D + 
Sbjct: 82  VQADFEFFDPKPTDFHGVKILLQNYLDDKEWDLSSFVDCILEQTTVGTVVKVADDEDESV 141

Query: 73  FSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNL 132
           F++VTALN+ R KD+KC +ELKEFL KVC EK++  +L + + ++A DVGLLVSQRV+NL
Sbjct: 142 FALVTALNMARDKDNKCFRELKEFLRKVCSEKNIANNLEMLLEKKAQDVGLLVSQRVMNL 201

Query: 133 PPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRNLK 192
           PPQLLPPLYD LFDEVSWA EDEPTE+LR  F FK YLLV+KIYKL       KN +  K
Sbjct: 202 PPQLLPPLYDGLFDEVSWAIEDEPTEKLRRSFRFKSYLLVTKIYKL-------KNPKQRK 254

Query: 193 RRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKI 252
            R   +  ++ V++KPEDE+F +LS WSF+FPM++Q V +QE+KNY+LMGLVMAVEA KI
Sbjct: 255 PRHGEEDIEDTVFLKPEDELFLELSSWSFTFPMRSQLVTSQEMKNYQLMGLVMAVEANKI 314

Query: 253 PTFRQELQSLI 263
           P FRQ L SLI
Sbjct: 315 PKFRQMLNSLI 325





Arabidopsis thaliana (taxid: 3702)
>sp|Q4WVS2|BCP1_ASPFU Protein bcp1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=bcp1 PE=3 SV=2 Back     alignment and function description
>sp|Q2U600|BCP1_ASPOR Protein bcp1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=bcp1 PE=3 SV=1 Back     alignment and function description
>sp|O74907|BCP1_SCHPO Protein bcp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bcp1 PE=3 SV=2 Back     alignment and function description
>sp|Q5AXW5|BCP1_EMENI Protein bcp1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bcp1 PE=3 SV=1 Back     alignment and function description
>sp|Q4HZK7|BCP1_GIBZE Protein BCP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=BCP1 PE=3 SV=1 Back     alignment and function description
>sp|Q2H137|BCP1_CHAGB Protein BCP1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=BCP1 PE=3 SV=1 Back     alignment and function description
>sp|Q7S8R3|BCP1_NEUCR Protein bcp-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=bcp-1 PE=3 SV=1 Back     alignment and function description
>sp|Q6BII5|BCP1_DEBHA Protein BCP1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=BCP1 PE=3 SV=1 Back     alignment and function description
>sp|Q6C7K5|BCP1_YARLI Protein BCP1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BCP1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
224061591337 predicted protein [Populus trichocarpa] 0.928 0.732 0.733 2e-98
255573744324 expressed protein, putative [Ricinus com 0.928 0.762 0.714 9e-96
357463585 390 BCCIP-like protein [Medicago truncatula] 0.932 0.635 0.687 3e-95
357463587364 BCCIP-like protein [Medicago truncatula] 0.932 0.681 0.687 5e-95
357463583327 BCCIP-like protein [Medicago truncatula] 0.932 0.758 0.687 5e-95
388520831333 unknown [Medicago truncatula] 0.932 0.744 0.687 6e-95
297744438 388 unnamed protein product [Vitis vinifera] 0.924 0.634 0.724 2e-94
359474781335 PREDICTED: protein BCCIP homolog [Vitis 0.924 0.734 0.724 2e-94
357464815323 BCCIP-like protein [Medicago truncatula] 0.932 0.767 0.683 5e-93
356525072333 PREDICTED: protein BCCIP homolog [Glycin 0.932 0.744 0.696 4e-88
>gi|224061591|ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|222847814|gb|EEE85361.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 187/255 (73%), Positives = 218/255 (85%), Gaps = 8/255 (3%)

Query: 11  GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDN 70
           G VQADF FFDPKPDDFHGVKILLQ+YLD+ +WDLSGFVDLIL QTTVGTVVKIE D+DN
Sbjct: 90  GEVQADFAFFDPKPDDFHGVKILLQSYLDNTEWDLSGFVDLILEQTTVGTVVKIEDDEDN 149

Query: 71  TPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVV 130
             FS+V+ALNL RYKDHKCI +LKE+LLK+CLEK +  DLR+ +GEQA++VGLLVS+RVV
Sbjct: 150 GLFSVVSALNLGRYKDHKCIADLKEYLLKLCLEKSIKGDLRVLLGEQAHNVGLLVSRRVV 209

Query: 131 NLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRN 190
           NLPPQLLPPLYD+LFDE+SWATEDEPTEELRN FCF  Y+LVSK+Y  KHKNA++KN   
Sbjct: 210 NLPPQLLPPLYDSLFDEISWATEDEPTEELRNSFCFNSYVLVSKMY--KHKNADKKN--- 264

Query: 191 LKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAA 250
              R +SDS + I+Y+ PEDEIFHKLSLWSF+FP   +QV  +ELKNYR MGLVMAVEA 
Sbjct: 265 ---RLSSDSEEAIIYVNPEDEIFHKLSLWSFNFPFHAEQVTARELKNYRPMGLVMAVEAD 321

Query: 251 KIPTFRQELQSLIVE 265
           KI TFR++L+SLI E
Sbjct: 322 KISTFREQLRSLIDE 336




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255573744|ref|XP_002527793.1| expressed protein, putative [Ricinus communis] gi|223532828|gb|EEF34603.1| expressed protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357463585|ref|XP_003602074.1| BCCIP-like protein [Medicago truncatula] gi|355491122|gb|AES72325.1| BCCIP-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357463587|ref|XP_003602075.1| BCCIP-like protein [Medicago truncatula] gi|355491123|gb|AES72326.1| BCCIP-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|357463583|ref|XP_003602073.1| BCCIP-like protein [Medicago truncatula] gi|355491121|gb|AES72324.1| BCCIP-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|388520831|gb|AFK48477.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|297744438|emb|CBI37700.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359474781|ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vinifera] Back     alignment and taxonomy information
>gi|357464815|ref|XP_003602689.1| BCCIP-like protein [Medicago truncatula] gi|355491737|gb|AES72940.1| BCCIP-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356525072|ref|XP_003531151.1| PREDICTED: protein BCCIP homolog [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query266
TAIR|locus:2050584326 AT2G44510 "AT2G44510" [Arabido 0.860 0.702 0.610 5.5e-70
ASPGD|ASPL0000002569290 AN6865 [Emericella nidulans (t 0.778 0.713 0.285 2.1e-20
POMBASE|SPCC613.08282 SPCC613.08 "CDK regulator, inv 0.725 0.684 0.278 1.5e-19
UNIPROTKB|G4MUW7289 MGG_01709 "Uncharacterized pro 0.793 0.730 0.287 1.4e-18
UNIPROTKB|Q9P287314 BCCIP "BRCA2 and CDKN1A-intera 0.699 0.592 0.276 2.6e-16
UNIPROTKB|E1BUA8303 BCCIP "Uncharacterized protein 0.703 0.617 0.273 1.4e-15
UNIPROTKB|Q2NL37306 BCCIP "BRCA2 and CDKN1A-intera 0.695 0.604 0.280 6e-15
UNIPROTKB|F1SDM6318 BCCIP "Uncharacterized protein 0.699 0.584 0.276 8.1e-14
MGI|MGI:1913415316 Bccip "BRCA2 and CDKN1A intera 0.699 0.588 0.258 6.7e-13
CGD|CAL0001325321 orf19.6346 [Candida albicans ( 0.781 0.647 0.269 6.2e-12
TAIR|locus:2050584 AT2G44510 "AT2G44510" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
 Identities = 144/236 (61%), Positives = 177/236 (75%)

Query:    28 HGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDH 87
             HGVKILLQ YLDD +WDLS FVD IL QTTVGTVVK+  D+D + F++VTALN+ R KD+
Sbjct:    97 HGVKILLQNYLDDKEWDLSSFVDCILEQTTVGTVVKVADDEDESVFALVTALNMARDKDN 156

Query:    88 KCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNXXXXXXXXXYDALFDE 147
             KC +ELKEFL KVC EK++  +L + + ++A DVGLLVSQRV+N         YD LFDE
Sbjct:   157 KCFRELKEFLRKVCSEKNIANNLEMLLEKKAQDVGLLVSQRVMNLPPQLLPPLYDGLFDE 216

Query:   148 VSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIK 207
             VSWA EDEPTE+LR  F FK YLLV+KIYKLK  N  Q+     K R   +  ++ V++K
Sbjct:   217 VSWAIEDEPTEKLRRSFRFKSYLLVTKIYKLK--NPKQR-----KPRHGEEDIEDTVFLK 269

Query:   208 PEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLI 263
             PEDE+F +LS WSF+FPM++Q V +QE+KNY+LMGLVMAVEA KIP FRQ L SLI
Sbjct:   270 PEDELFLELSSWSFTFPMRSQLVTSQEMKNYQLMGLVMAVEANKIPKFRQMLNSLI 325




GO:0003674 "molecular_function" evidence=ND
GO:0008150 "biological_process" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0005730 "nucleolus" evidence=IDA
ASPGD|ASPL0000002569 AN6865 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPCC613.08 SPCC613.08 "CDK regulator, involved in ribosome export (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|G4MUW7 MGG_01709 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
UNIPROTKB|Q9P287 BCCIP "BRCA2 and CDKN1A-interacting protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BUA8 BCCIP "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q2NL37 BCCIP "BRCA2 and CDKN1A-interacting protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SDM6 BCCIP "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1913415 Bccip "BRCA2 and CDKN1A interacting protein" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
CGD|CAL0001325 orf19.6346 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5AXW5BCP1_EMENINo assigned EC number0.30760.90220.8275yesno
O64885BCCIP_ARATHNo assigned EC number0.65730.91720.7484yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
pfam13862189 pfam13862, BCIP, p21-C-terminal region-binding pro 3e-72
>gnl|CDD|222424 pfam13862, BCIP, p21-C-terminal region-binding protein Back     alignment and domain information
 Score =  218 bits (559), Expect = 3e-72
 Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 21/207 (10%)

Query: 11  GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDN 70
             V  DF FFDP   DFHG+K LL+    DA+ DLS   DLIL Q T+G+V+K    +++
Sbjct: 1   EEVNVDFEFFDPNDIDFHGIKNLLRQLFLDAEIDLSELADLILEQNTIGSVIKQSDGEED 60

Query: 71  TPFSIVTALNLRRYKDHKCIKELKEFLLKVCLE---KDVIKDLRLFMGEQANDVGLLVSQ 127
             +  ++ LNL +YKD   IK+L+E+LL    +   K+V+  L   + +    VGLL+++
Sbjct: 61  DVYGFLSVLNLTQYKDSPAIKQLREYLLDKAKKSADKEVLAKLEKLLSDSDKKVGLLINE 120

Query: 128 RVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKN 187
           R +N+PP+L+PPLY  L +E+ WA EDE        + F  YL++SK+YK    N   K 
Sbjct: 121 RFINMPPELVPPLYKMLLEEIEWAQEDE------KPYKFTHYLILSKVYKENDPNKKAKK 174

Query: 188 KRNLKRRSASDSGDEIVYIKPEDEIFH 214
           K            DE++Y  PEDE   
Sbjct: 175 K------------DELIYFNPEDEFLF 189


This family of p21-binding proteins is important as a modulator of p21 activity. The domain binds the C-terminal region of p21 in a ternary complex with CDK2, which results in inhibition of the kinase activity of CDK2. Length = 189

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 266
PF13862194 BCIP: p21-C-terminal region-binding protein 100.0
KOG3034308 consensus Isoamyl acetate-hydrolyzing esterase and 100.0
>PF13862 BCIP: p21-C-terminal region-binding protein Back     alignment and domain information
Probab=100.00  E-value=5.9e-66  Score=450.23  Aligned_cols=191  Identities=48%  Similarity=0.856  Sum_probs=170.3

Q ss_pred             ceEEEEEEecCCCCCcHHHHHHHHHHhhccCCCChhhHHHHHHcCCCcceEEEeccCCCCCceEEEEeeecccccCchhH
Q 024555           11 GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCI   90 (266)
Q Consensus        11 e~v~vDFef~dp~~~DfhgIK~LL~qlf~~~~~~ls~LadlIi~Q~~vGtvVK~~~dde~dvyg~~SvLnl~~~k~~~~i   90 (266)
                      |+||||||||||+|.||||||+||+|||+.++||+++|||+|++|++||||||++|++|+|||||+|||||++|++++|+
T Consensus         1 e~V~vdFe~~dp~~~D~hgIk~LL~ql~~~~~~dl~~LadlIi~Q~~vGsvVK~~d~~e~dvyg~~Svlnl~~~k~~~~i   80 (194)
T PF13862_consen    1 EEVNVDFEFFDPNEIDFHGIKNLLQQLFLDAEIDLSELADLIIEQNNVGSVVKQADGDEDDVYGFLSVLNLTQHKDHPCI   80 (194)
T ss_pred             CeEEEEEEeeCCChhhHHHHHHHHHHhccccCcCHHHHHHHHHcCCCCceEEEecCCCCCcceEEEEEEEcccccccHHH
Confidence            68999999999999999999999999999999999999999999999999999965678999999999999999999999


Q ss_pred             HHHHHHHHhhcC---ChhHHHHHHHHhccCCCceEEEEeccccCCCccchHHHHHHHHHHHHHhhhcCChhhhcCccCcc
Q 024555           91 KELKEFLLKVCL---EKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFK  167 (266)
Q Consensus        91 ~~l~~yll~~~~---~~~~~~~l~~ll~~~~~~vGLlinER~iN~P~ql~ppl~~~L~eei~~a~~~~~~ee~~~~~~F~  167 (266)
                      ++|++||+++|+   +++..+.|+++|++++++|||||||||+|||+||+||||++|++||+||.+++      ++|+|+
T Consensus        81 ~~l~~yl~~k~~~~~~~~~~~~l~~~l~~~~~~vGLlinER~iN~P~ql~ppl~~~L~~ei~~a~~~~------~~~~f~  154 (194)
T PF13862_consen   81 KQLRKYLLSKCSKSADKEVKKKLEKLLSSSNKNVGLLINERFINIPPQLAPPLYKMLLEEIEWAQEDE------KPFKFT  154 (194)
T ss_pred             HHHHHHHHHHhhhccChhHHHHHHHHHhccCCCeEEEEehhhhcCCHHHHHHHHHHHHHHHHHHHhcC------CCCCCe
Confidence            999999999886   67788999999998889999999999999999999999999999999999875      679999


Q ss_pred             EEEEEEeEEeeccccchhhhhhhhhccCCCCCCCceeccChhhhHHH
Q 024555          168 CYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFH  214 (266)
Q Consensus       168 ~~L~isk~y~~~~~~~~~k~~k~kk~~~~~~~~~~~~y~~pEDE~~~  214 (266)
                      |||++||+|++..+..+++   ++|    ....++++|+|||||+|+
T Consensus       155 ~yL~isk~y~~~~~~~~~~---~~~----~~~~~~~~~~~~Ede~~~  194 (194)
T PF13862_consen  155 HYLIISKVYKEKKKKKRKK---KKK----KKKKDEIIYFNPEDEIFH  194 (194)
T ss_pred             EEEEEEEEEeecccccccc---ccc----cCCcccceeCChhhhhcC
Confidence            9999999998632211111   111    123468999999999985



>KOG3034 consensus Isoamyl acetate-hydrolyzing esterase and related enzymes [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query266
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 45.6 bits (107), Expect = 9e-06
 Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 64/219 (29%)

Query: 5   SLLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILA---------- 54
           S+L K+ +   D +      D   G   L  T L   +  +  FV+ +L           
Sbjct: 44  SILSKEEI---DHII--MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98

Query: 55  -----QTTVGTVVKIEGDD----DNTPFSIVTALNLRRYKDHKCIKELKEFLL------- 98
                Q ++ T + IE  D    DN  F+     N+ R    +   +L++ LL       
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFA---KYNVSR---LQPYLKLRQALLELRPAKN 152

Query: 99  ----------KVCLEKDVIKDLRL--------F---MGEQANDVGLLVSQRVVNLPPQLL 137
                     K  +  DV    ++        F   +    +   +L  + +  L  Q+ 
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL--EMLQKLLYQID 210

Query: 138 PPLYDALFDEVSWATE-DEPTEELRNFFCFKCY---LLV 172
           P          +          ELR     K Y   LLV
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00