Citrus Sinensis ID: 024555
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 266 | ||||||
| 224061591 | 337 | predicted protein [Populus trichocarpa] | 0.928 | 0.732 | 0.733 | 2e-98 | |
| 255573744 | 324 | expressed protein, putative [Ricinus com | 0.928 | 0.762 | 0.714 | 9e-96 | |
| 357463585 | 390 | BCCIP-like protein [Medicago truncatula] | 0.932 | 0.635 | 0.687 | 3e-95 | |
| 357463587 | 364 | BCCIP-like protein [Medicago truncatula] | 0.932 | 0.681 | 0.687 | 5e-95 | |
| 357463583 | 327 | BCCIP-like protein [Medicago truncatula] | 0.932 | 0.758 | 0.687 | 5e-95 | |
| 388520831 | 333 | unknown [Medicago truncatula] | 0.932 | 0.744 | 0.687 | 6e-95 | |
| 297744438 | 388 | unnamed protein product [Vitis vinifera] | 0.924 | 0.634 | 0.724 | 2e-94 | |
| 359474781 | 335 | PREDICTED: protein BCCIP homolog [Vitis | 0.924 | 0.734 | 0.724 | 2e-94 | |
| 357464815 | 323 | BCCIP-like protein [Medicago truncatula] | 0.932 | 0.767 | 0.683 | 5e-93 | |
| 356525072 | 333 | PREDICTED: protein BCCIP homolog [Glycin | 0.932 | 0.744 | 0.696 | 4e-88 |
| >gi|224061591|ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|222847814|gb|EEE85361.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/255 (73%), Positives = 218/255 (85%), Gaps = 8/255 (3%)
Query: 11 GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDN 70
G VQADF FFDPKPDDFHGVKILLQ+YLD+ +WDLSGFVDLIL QTTVGTVVKIE D+DN
Sbjct: 90 GEVQADFAFFDPKPDDFHGVKILLQSYLDNTEWDLSGFVDLILEQTTVGTVVKIEDDEDN 149
Query: 71 TPFSIVTALNLRRYKDHKCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVV 130
FS+V+ALNL RYKDHKCI +LKE+LLK+CLEK + DLR+ +GEQA++VGLLVS+RVV
Sbjct: 150 GLFSVVSALNLGRYKDHKCIADLKEYLLKLCLEKSIKGDLRVLLGEQAHNVGLLVSRRVV 209
Query: 131 NLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRN 190
NLPPQLLPPLYD+LFDE+SWATEDEPTEELRN FCF Y+LVSK+Y KHKNA++KN
Sbjct: 210 NLPPQLLPPLYDSLFDEISWATEDEPTEELRNSFCFNSYVLVSKMY--KHKNADKKN--- 264
Query: 191 LKRRSASDSGDEIVYIKPEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAA 250
R +SDS + I+Y+ PEDEIFHKLSLWSF+FP +QV +ELKNYR MGLVMAVEA
Sbjct: 265 ---RLSSDSEEAIIYVNPEDEIFHKLSLWSFNFPFHAEQVTARELKNYRPMGLVMAVEAD 321
Query: 251 KIPTFRQELQSLIVE 265
KI TFR++L+SLI E
Sbjct: 322 KISTFREQLRSLIDE 336
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255573744|ref|XP_002527793.1| expressed protein, putative [Ricinus communis] gi|223532828|gb|EEF34603.1| expressed protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|357463585|ref|XP_003602074.1| BCCIP-like protein [Medicago truncatula] gi|355491122|gb|AES72325.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357463587|ref|XP_003602075.1| BCCIP-like protein [Medicago truncatula] gi|355491123|gb|AES72326.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357463583|ref|XP_003602073.1| BCCIP-like protein [Medicago truncatula] gi|355491121|gb|AES72324.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|388520831|gb|AFK48477.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297744438|emb|CBI37700.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359474781|ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357464815|ref|XP_003602689.1| BCCIP-like protein [Medicago truncatula] gi|355491737|gb|AES72940.1| BCCIP-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356525072|ref|XP_003531151.1| PREDICTED: protein BCCIP homolog [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 266 | ||||||
| TAIR|locus:2050584 | 326 | AT2G44510 "AT2G44510" [Arabido | 0.860 | 0.702 | 0.610 | 5.5e-70 | |
| ASPGD|ASPL0000002569 | 290 | AN6865 [Emericella nidulans (t | 0.778 | 0.713 | 0.285 | 2.1e-20 | |
| POMBASE|SPCC613.08 | 282 | SPCC613.08 "CDK regulator, inv | 0.725 | 0.684 | 0.278 | 1.5e-19 | |
| UNIPROTKB|G4MUW7 | 289 | MGG_01709 "Uncharacterized pro | 0.793 | 0.730 | 0.287 | 1.4e-18 | |
| UNIPROTKB|Q9P287 | 314 | BCCIP "BRCA2 and CDKN1A-intera | 0.699 | 0.592 | 0.276 | 2.6e-16 | |
| UNIPROTKB|E1BUA8 | 303 | BCCIP "Uncharacterized protein | 0.703 | 0.617 | 0.273 | 1.4e-15 | |
| UNIPROTKB|Q2NL37 | 306 | BCCIP "BRCA2 and CDKN1A-intera | 0.695 | 0.604 | 0.280 | 6e-15 | |
| UNIPROTKB|F1SDM6 | 318 | BCCIP "Uncharacterized protein | 0.699 | 0.584 | 0.276 | 8.1e-14 | |
| MGI|MGI:1913415 | 316 | Bccip "BRCA2 and CDKN1A intera | 0.699 | 0.588 | 0.258 | 6.7e-13 | |
| CGD|CAL0001325 | 321 | orf19.6346 [Candida albicans ( | 0.781 | 0.647 | 0.269 | 6.2e-12 |
| TAIR|locus:2050584 AT2G44510 "AT2G44510" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 144/236 (61%), Positives = 177/236 (75%)
Query: 28 HGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDH 87
HGVKILLQ YLDD +WDLS FVD IL QTTVGTVVK+ D+D + F++VTALN+ R KD+
Sbjct: 97 HGVKILLQNYLDDKEWDLSSFVDCILEQTTVGTVVKVADDEDESVFALVTALNMARDKDN 156
Query: 88 KCIKELKEFLLKVCLEKDVIKDLRLFMGEQANDVGLLVSQRVVNXXXXXXXXXYDALFDE 147
KC +ELKEFL KVC EK++ +L + + ++A DVGLLVSQRV+N YD LFDE
Sbjct: 157 KCFRELKEFLRKVCSEKNIANNLEMLLEKKAQDVGLLVSQRVMNLPPQLLPPLYDGLFDE 216
Query: 148 VSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIK 207
VSWA EDEPTE+LR F FK YLLV+KIYKLK N Q+ K R + ++ V++K
Sbjct: 217 VSWAIEDEPTEKLRRSFRFKSYLLVTKIYKLK--NPKQR-----KPRHGEEDIEDTVFLK 269
Query: 208 PEDEIFHKLSLWSFSFPMQTQQVETQELKNYRLMGLVMAVEAAKIPTFRQELQSLI 263
PEDE+F +LS WSF+FPM++Q V +QE+KNY+LMGLVMAVEA KIP FRQ L SLI
Sbjct: 270 PEDELFLELSSWSFTFPMRSQLVTSQEMKNYQLMGLVMAVEANKIPKFRQMLNSLI 325
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| ASPGD|ASPL0000002569 AN6865 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| POMBASE|SPCC613.08 SPCC613.08 "CDK regulator, involved in ribosome export (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
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| UNIPROTKB|G4MUW7 MGG_01709 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9P287 BCCIP "BRCA2 and CDKN1A-interacting protein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BUA8 BCCIP "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2NL37 BCCIP "BRCA2 and CDKN1A-interacting protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SDM6 BCCIP "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1913415 Bccip "BRCA2 and CDKN1A interacting protein" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| CGD|CAL0001325 orf19.6346 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 266 | |||
| pfam13862 | 189 | pfam13862, BCIP, p21-C-terminal region-binding pro | 3e-72 |
| >gnl|CDD|222424 pfam13862, BCIP, p21-C-terminal region-binding protein | Back alignment and domain information |
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Score = 218 bits (559), Expect = 3e-72
Identities = 80/207 (38%), Positives = 116/207 (56%), Gaps = 21/207 (10%)
Query: 11 GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDN 70
V DF FFDP DFHG+K LL+ DA+ DLS DLIL Q T+G+V+K +++
Sbjct: 1 EEVNVDFEFFDPNDIDFHGIKNLLRQLFLDAEIDLSELADLILEQNTIGSVIKQSDGEED 60
Query: 71 TPFSIVTALNLRRYKDHKCIKELKEFLLKVCLE---KDVIKDLRLFMGEQANDVGLLVSQ 127
+ ++ LNL +YKD IK+L+E+LL + K+V+ L + + VGLL+++
Sbjct: 61 DVYGFLSVLNLTQYKDSPAIKQLREYLLDKAKKSADKEVLAKLEKLLSDSDKKVGLLINE 120
Query: 128 RVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFKCYLLVSKIYKLKHKNANQKN 187
R +N+PP+L+PPLY L +E+ WA EDE + F YL++SK+YK N K
Sbjct: 121 RFINMPPELVPPLYKMLLEEIEWAQEDE------KPYKFTHYLILSKVYKENDPNKKAKK 174
Query: 188 KRNLKRRSASDSGDEIVYIKPEDEIFH 214
K DE++Y PEDE
Sbjct: 175 K------------DELIYFNPEDEFLF 189
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This family of p21-binding proteins is important as a modulator of p21 activity. The domain binds the C-terminal region of p21 in a ternary complex with CDK2, which results in inhibition of the kinase activity of CDK2. Length = 189 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 266 | |||
| PF13862 | 194 | BCIP: p21-C-terminal region-binding protein | 100.0 | |
| KOG3034 | 308 | consensus Isoamyl acetate-hydrolyzing esterase and | 100.0 |
| >PF13862 BCIP: p21-C-terminal region-binding protein | Back alignment and domain information |
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Probab=100.00 E-value=5.9e-66 Score=450.23 Aligned_cols=191 Identities=48% Similarity=0.856 Sum_probs=170.3
Q ss_pred ceEEEEEEecCCCCCcHHHHHHHHHHhhccCCCChhhHHHHHHcCCCcceEEEeccCCCCCceEEEEeeecccccCchhH
Q 024555 11 GVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILAQTTVGTVVKIEGDDDNTPFSIVTALNLRRYKDHKCI 90 (266)
Q Consensus 11 e~v~vDFef~dp~~~DfhgIK~LL~qlf~~~~~~ls~LadlIi~Q~~vGtvVK~~~dde~dvyg~~SvLnl~~~k~~~~i 90 (266)
|+||||||||||+|.||||||+||+|||+.++||+++|||+|++|++||||||++|++|+|||||+|||||++|++++|+
T Consensus 1 e~V~vdFe~~dp~~~D~hgIk~LL~ql~~~~~~dl~~LadlIi~Q~~vGsvVK~~d~~e~dvyg~~Svlnl~~~k~~~~i 80 (194)
T PF13862_consen 1 EEVNVDFEFFDPNEIDFHGIKNLLQQLFLDAEIDLSELADLIIEQNNVGSVVKQADGDEDDVYGFLSVLNLTQHKDHPCI 80 (194)
T ss_pred CeEEEEEEeeCCChhhHHHHHHHHHHhccccCcCHHHHHHHHHcCCCCceEEEecCCCCCcceEEEEEEEcccccccHHH
Confidence 68999999999999999999999999999999999999999999999999999965678999999999999999999999
Q ss_pred HHHHHHHHhhcC---ChhHHHHHHHHhccCCCceEEEEeccccCCCccchHHHHHHHHHHHHHhhhcCChhhhcCccCcc
Q 024555 91 KELKEFLLKVCL---EKDVIKDLRLFMGEQANDVGLLVSQRVVNLPPQLLPPLYDALFDEVSWATEDEPTEELRNFFCFK 167 (266)
Q Consensus 91 ~~l~~yll~~~~---~~~~~~~l~~ll~~~~~~vGLlinER~iN~P~ql~ppl~~~L~eei~~a~~~~~~ee~~~~~~F~ 167 (266)
++|++||+++|+ +++..+.|+++|++++++|||||||||+|||+||+||||++|++||+||.+++ ++|+|+
T Consensus 81 ~~l~~yl~~k~~~~~~~~~~~~l~~~l~~~~~~vGLlinER~iN~P~ql~ppl~~~L~~ei~~a~~~~------~~~~f~ 154 (194)
T PF13862_consen 81 KQLRKYLLSKCSKSADKEVKKKLEKLLSSSNKNVGLLINERFINIPPQLAPPLYKMLLEEIEWAQEDE------KPFKFT 154 (194)
T ss_pred HHHHHHHHHHhhhccChhHHHHHHHHHhccCCCeEEEEehhhhcCCHHHHHHHHHHHHHHHHHHHhcC------CCCCCe
Confidence 999999999886 67788999999998889999999999999999999999999999999999875 679999
Q ss_pred EEEEEEeEEeeccccchhhhhhhhhccCCCCCCCceeccChhhhHHH
Q 024555 168 CYLLVSKIYKLKHKNANQKNKRNLKRRSASDSGDEIVYIKPEDEIFH 214 (266)
Q Consensus 168 ~~L~isk~y~~~~~~~~~k~~k~kk~~~~~~~~~~~~y~~pEDE~~~ 214 (266)
|||++||+|++..+..+++ ++| ....++++|+|||||+|+
T Consensus 155 ~yL~isk~y~~~~~~~~~~---~~~----~~~~~~~~~~~~Ede~~~ 194 (194)
T PF13862_consen 155 HYLIISKVYKEKKKKKRKK---KKK----KKKKDEIIYFNPEDEIFH 194 (194)
T ss_pred EEEEEEEEEeecccccccc---ccc----cCCcccceeCChhhhhcC
Confidence 9999999998632211111 111 123468999999999985
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| >KOG3034 consensus Isoamyl acetate-hydrolyzing esterase and related enzymes [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 266 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 9e-06
Identities = 41/219 (18%), Positives = 68/219 (31%), Gaps = 64/219 (29%)
Query: 5 SLLKKKGVVQADFVFFDPKPDDFHGVKILLQTYLDDAQWDLSGFVDLILA---------- 54
S+L K+ + D + D G L T L + + FV+ +L
Sbjct: 44 SILSKEEI---DHII--MSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI 98
Query: 55 -----QTTVGTVVKIEGDD----DNTPFSIVTALNLRRYKDHKCIKELKEFLL------- 98
Q ++ T + IE D DN F+ N+ R + +L++ LL
Sbjct: 99 KTEQRQPSMMTRMYIEQRDRLYNDNQVFA---KYNVSR---LQPYLKLRQALLELRPAKN 152
Query: 99 ----------KVCLEKDVIKDLRL--------F---MGEQANDVGLLVSQRVVNLPPQLL 137
K + DV ++ F + + +L + + L Q+
Sbjct: 153 VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVL--EMLQKLLYQID 210
Query: 138 PPLYDALFDEVSWATE-DEPTEELRNFFCFKCY---LLV 172
P + ELR K Y LLV
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00