Citrus Sinensis ID: 024578
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 265 | 2.2.26 [Sep-21-2011] | |||||||
| Q09893 | 226 | Uncharacterized protein C | yes | no | 0.792 | 0.929 | 0.340 | 4e-20 | |
| P53078 | 280 | Suppressor of disruption | yes | no | 0.698 | 0.660 | 0.283 | 3e-16 | |
| P40025 | 321 | Phosphate metabolism prot | no | no | 0.701 | 0.579 | 0.278 | 2e-12 |
| >sp|Q09893|YAI5_SCHPO Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24B11.05 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 110/241 (45%), Gaps = 31/241 (12%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
+ FDLD+ LYP S + I F S L I E R+ YR +G + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 75 GYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQRK--IIFTNADQKHAMEVLGRL 131
+E D ++ V LP EK +K D VLR +LL + ++ IFTNA HA VL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 132 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV-DP 190
G+EDCF DGI +++ ++ KP E E +R A V D
Sbjct: 127 GIEDCF-------------------DGITYCDYNAKD-LIAKPMPEMYERVMREAGVTDK 166
Query: 191 KKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPA-DHALNSIHNIKEAIPEIWEG 245
K IF DDS NI A+ G + G +P P A H + IH K + EI +G
Sbjct: 167 DKCIFVDDSYGNILGAREFGWKYTVQLVEHGDPLPQPQAGSHVIRDIHKFKHLLDEI-DG 225
Query: 246 E 246
E
Sbjct: 226 E 226
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|P53078|SDT1_YEAST Suppressor of disruption of TFIIS OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SDT1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 70
N + FD+D+ LY ST + +++I F HL + + + Y+E+G + G
Sbjct: 54 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRG 113
Query: 71 LKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQ-----RKIIFTNADQKHA 124
L + ++ + E++ V LP + LKPD LRN+LL + Q + +FTNA + HA
Sbjct: 114 L-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA 172
Query: 125 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184
+ L LG+ D F DG+ +S ++CKP ++A E A++
Sbjct: 173 IRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKPHVKAFEKAMK 213
Query: 185 IANVDPKKTIFF-DDSARNIASAKAAGLHTVI 215
+ + + +F DDS +NI + G+ T I
Sbjct: 214 ESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
|
Could be an enzyme that inactivates 6-azauracil by modifying it. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|P40025|PHM8_YEAST Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 26/212 (12%)
Query: 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK 72
+ FD+D+TLY ST L ++++ F L D+ E R+ Y+E+G ++ GL
Sbjct: 53 KVFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLI 112
Query: 73 AVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRN-------LLLSMPQRKIIFTNADQKHA 124
D +++ F+ LP + LKPD LR L + +FTN+ + HA
Sbjct: 113 KNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHA 172
Query: 125 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184
+ + LG+ D F+GI P IE + +CKP + ETA
Sbjct: 173 IRCVKILGIADLFDGITYCHYDRP----------IE-------EEFICKPDPKFFETAKL 215
Query: 185 IANVDP-KKTIFFDDSARNIASAKAAGLHTVI 215
+ + F DD+ N+ SA + G+ VI
Sbjct: 216 QSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247
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May be involved in phosphate metabolism. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 265 | ||||||
| 224130792 | 261 | predicted protein [Populus trichocarpa] | 0.984 | 1.0 | 0.773 | 1e-117 | |
| 224068304 | 302 | predicted protein [Populus trichocarpa] | 0.984 | 0.864 | 0.708 | 1e-116 | |
| 255548203 | 283 | catalytic, putative [Ricinus communis] g | 1.0 | 0.936 | 0.724 | 1e-114 | |
| 359807448 | 274 | uncharacterized protein LOC100814291 [Gl | 1.0 | 0.967 | 0.726 | 1e-110 | |
| 225437740 | 287 | PREDICTED: suppressor of disruption of T | 1.0 | 0.923 | 0.721 | 1e-109 | |
| 356572862 | 279 | PREDICTED: uncharacterized protein C24B1 | 0.996 | 0.946 | 0.685 | 1e-107 | |
| 356505699 | 279 | PREDICTED: uncharacterized protein C24B1 | 0.996 | 0.946 | 0.685 | 1e-107 | |
| 388509590 | 257 | unknown [Medicago truncatula] | 0.939 | 0.968 | 0.713 | 1e-106 | |
| 297744067 | 302 | unnamed protein product [Vitis vinifera] | 0.947 | 0.831 | 0.733 | 1e-103 | |
| 79456826 | 249 | haloacid dehalogenase-like hydrolase dom | 0.932 | 0.991 | 0.689 | 2e-99 |
| >gi|224130792|ref|XP_002320927.1| predicted protein [Populus trichocarpa] gi|222861700|gb|EEE99242.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/265 (77%), Positives = 226/265 (85%), Gaps = 4/265 (1%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MDT R YECLLFD+DDTLYP+S G NLACR+NIEEFM LHI+ESEVPRMCLEL
Sbjct: 1 MDTAERANGPKYECLLFDMDDTLYPMSLGLNLACRKNIEEFMLHKLHIEESEVPRMCLEL 60
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YREHGTTMAGLK +GYEFD+DEFHAFVHG+LPYE LKPDPVLRNLLLS+PQRKIIFTNAD
Sbjct: 61 YREHGTTMAGLKDLGYEFDDDEFHAFVHGRLPYETLKPDPVLRNLLLSLPQRKIIFTNAD 120
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 180
+ HA EVL R+GLEDCFEG+IC+ET+NP L+ A+N D ++N++ RILCKPSLEAIE
Sbjct: 121 KAHAAEVLKRMGLEDCFEGVICYETLNPPLENANNMDALDNDA----SRILCKPSLEAIE 176
Query: 181 TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 240
AI+IANVDPKKTIFFDDSARNIAS KAAGL TVIVGSSV VP ADH L +IHNIKEAIP
Sbjct: 177 AAIQIANVDPKKTIFFDDSARNIASGKAAGLRTVIVGSSVLVPGADHGLRNIHNIKEAIP 236
Query: 241 EIWEGEGEQLEQVIQPAAVETAVLA 265
EIWE EGEQ EQVIQ AVET V A
Sbjct: 237 EIWEDEGEQSEQVIQSTAVETVVHA 261
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224068304|ref|XP_002302699.1| predicted protein [Populus trichocarpa] gi|222844425|gb|EEE81972.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 422 bits (1085), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/292 (70%), Positives = 227/292 (77%), Gaps = 31/292 (10%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MD GR YECLLFD+DDTLYPLS G N+ACR+NIEEFM LHI+ESEVPRMCLEL
Sbjct: 10 MDAAGRANGPKYECLLFDMDDTLYPLSLGLNMACRKNIEEFMLHQLHIEESEVPRMCLEL 69
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YREHGTTMAGLKA+GYEFDNDEFHAFVHG+LP E LKPDPVLRN+LLS+PQRKIIFTNAD
Sbjct: 70 YREHGTTMAGLKALGYEFDNDEFHAFVHGRLPCETLKPDPVLRNILLSVPQRKIIFTNAD 129
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN------------------- 161
+ HA EVL R+GLEDCFEG+ICFET+NP L+ A+N D ++N
Sbjct: 130 KAHAAEVLKRMGLEDCFEGVICFETLNPPLENANNMDALDNDAVIAGGEPEPSDFDGTAA 189
Query: 162 ------------NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209
N FSS RILCKPSLEAIE AI+IANVDPKKTIFFDDSARNIAS KAA
Sbjct: 190 TGSKKILKNALDNGFSSKSRILCKPSLEAIEAAIQIANVDPKKTIFFDDSARNIASGKAA 249
Query: 210 GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVET 261
GLHTVIVGSSV VP AD+AL SIHNIKEAIPEIWE EGE++E VIQ VET
Sbjct: 250 GLHTVIVGSSVLVPGADNALRSIHNIKEAIPEIWEDEGEEMELVIQSTTVET 301
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255548203|ref|XP_002515158.1| catalytic, putative [Ricinus communis] gi|223545638|gb|EEF47142.1| catalytic, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/283 (72%), Positives = 229/283 (80%), Gaps = 18/283 (6%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
M+ R YECLLFD+DDTLYP+S+G NLACR+NIEEFM HL+I+ESEVPRMCLEL
Sbjct: 1 MEAERRANELKYECLLFDMDDTLYPMSSGLNLACRKNIEEFMLHHLNIEESEVPRMCLEL 60
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YRE+GTTMAGLKA+GYEFD+DEFHAF HG+LPYEKLKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 61 YREYGTTMAGLKAIGYEFDDDEFHAFAHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF---------------- 164
+ HA EVL RLGLEDCFEGIICFET+NP L A+ D ++++
Sbjct: 121 KAHAAEVLQRLGLEDCFEGIICFETLNPPLGTANYMDALDDDEVLASGEPQHSDLDDADT 180
Query: 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP 224
+S RILCKPSLEA+E AIRIA+VDPK+TIFFDDS RNIAS KAAGLHTVIVGSSV VP
Sbjct: 181 NSKPRILCKPSLEAMEAAIRIADVDPKRTIFFDDSVRNIASGKAAGLHTVIVGSSVLVPG 240
Query: 225 ADHALNSIHNIKEAIPEIWEGEGEQLEQVI--QPAAVETAVLA 265
ADH L+SIHNIKEAIPEIWEGEGE LEQVI +AVE VLA
Sbjct: 241 ADHVLSSIHNIKEAIPEIWEGEGEHLEQVIPSSASAVEALVLA 283
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359807448|ref|NP_001241392.1| uncharacterized protein LOC100814291 [Glycine max] gi|255645771|gb|ACU23378.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/274 (72%), Positives = 223/274 (81%), Gaps = 9/274 (3%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MDT RT YECLLFD+DDTLYPLS G NL CR+NI+E+M + LHI+ESEVP+MCL+L
Sbjct: 1 MDTSYRTGGVKYECLLFDMDDTLYPLSLGLNLFCRKNIQEYMLELLHIEESEVPKMCLDL 60
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YRE+GTTMAGLK +GYEFDNDEFHA+VHG+LPYEKLKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 61 YREYGTTMAGLKVLGYEFDNDEFHAYVHGRLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQ------PADN---TDGIENNSFSSNQRIL 171
HA++VL RLGLEDCFEGIICFET+NP Q P DN TD EN F+S+ +IL
Sbjct: 121 HAHAVKVLNRLGLEDCFEGIICFETLNPPKQINCMDVPNDNHVLTDLTENGCFNSHPQIL 180
Query: 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 231
CKPS+EA E AIRIANVDPKKTIFFDDS RN+ SAK GL+TV+VG S VP ADHALNS
Sbjct: 181 CKPSVEAFEAAIRIANVDPKKTIFFDDSVRNVESAKITGLNTVLVGHSDLVPGADHALNS 240
Query: 232 IHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 265
IHNIKEA+PEIWE E +Q IQP VET VLA
Sbjct: 241 IHNIKEALPEIWEIEDGNQQQKIQPPTVETMVLA 274
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437740|ref|XP_002280756.1| PREDICTED: suppressor of disruption of TFIIS-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/287 (72%), Positives = 231/287 (80%), Gaps = 22/287 (7%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MD + + A YECLLFD+DDTLYP+S+G NLACR+NIE++M QHL+I+ESEVPRMCLEL
Sbjct: 1 MDAVEGSNRAKYECLLFDMDDTLYPMSSGLNLACRKNIEDYMLQHLNIEESEVPRMCLEL 60
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YRE+GTTMAGLKA+GYEFD+DEFHA+VHG+LPYE LKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 61 YREYGTTMAGLKALGYEFDDDEFHAYVHGRLPYESLKPDPVLRNLLLSMPQRKIIFTNAD 120
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINP--------------------RLQPADN-TDGI 159
++HA +VL RLGLE CFEG+ICFET+NP +P DN D
Sbjct: 121 REHAAQVLNRLGLEGCFEGVICFETLNPPPEPTEYNEELEGNGVCKEGASEPEDNAADMA 180
Query: 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219
E+NSF ILCKPS+EAIE AIRIANVDPKKTIFFDDSARNI S KAAGLHTVIVGSS
Sbjct: 181 ESNSFRPRSPILCKPSVEAIEAAIRIANVDPKKTIFFDDSARNITSGKAAGLHTVIVGSS 240
Query: 220 VPVPPADHALNSIHNIKEAIPEIW-EGEGEQLEQVIQPAAVETAVLA 265
V VP ADHAL SIHNIKEA+PEIW EGEQLEQVIQ AVET VLA
Sbjct: 241 VLVPGADHALGSIHNIKEALPEIWEGEEGEQLEQVIQSTAVETVVLA 287
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356572862|ref|XP_003554584.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 229/280 (81%), Gaps = 16/280 (5%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MDT R Y+CLLFD+DDTLYPLSTG NLACR+NIEE+M +HLH++ESEVP++C++L
Sbjct: 1 MDTSRRIAGFKYDCLLFDMDDTLYPLSTGLNLACRKNIEEYMLKHLHMEESEVPKICVDL 60
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YRE+GTTMAGLKA G+EFDNDEFHA+VHG+LPY+KLKPDPVLRNLL SMPQRKI+FTNAD
Sbjct: 61 YREYGTTMAGLKAFGHEFDNDEFHAYVHGRLPYKKLKPDPVLRNLLFSMPQRKIVFTNAD 120
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINP---RLQPADN------------TDGIENNSFS 165
Q HA +VL RLGL++CF+ IICFET+NP P DN + +EN F+
Sbjct: 121 QAHAHQVLNRLGLKECFDSIICFETLNPPNYTNVPTDNLALTWSNSFNKDCNQVENRCFN 180
Query: 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA 225
S +ILCKPS+EAIE AI+IAN+DP+KT+FFDDSARNIAS KAAGL+TVIVG S VP A
Sbjct: 181 SKTQILCKPSVEAIEVAIQIANLDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGA 240
Query: 226 DHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 265
D+AL+SIHNIKEA+PEIWE EGE L+Q+IQ AVET VLA
Sbjct: 241 DYALSSIHNIKEALPEIWEVEGE-LQQMIQSPAVETMVLA 279
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356505699|ref|XP_003521627.1| PREDICTED: uncharacterized protein C24B11.05-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/280 (68%), Positives = 228/280 (81%), Gaps = 16/280 (5%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MDT R + Y+CLL D+DDTLYPLSTG NLACR+NIE +M +HL ++ESEVP++C++L
Sbjct: 1 MDTSRRISGFKYDCLLLDMDDTLYPLSTGLNLACRKNIEGYMLKHLLMEESEVPKLCVDL 60
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YRE+GTTMAGLKA GYEFDNDEFHA+VHG+LPYEKLKPDPVLR+LLLSMPQRKI+FTNAD
Sbjct: 61 YREYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYEKLKPDPVLRSLLLSMPQRKIVFTNAD 120
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINP---RLQPAD------------NTDGIENNSFS 165
Q HA +VL RLGL DCF+GIICFET+NP P D + + +E+ F+
Sbjct: 121 QAHAHQVLNRLGLNDCFDGIICFETLNPPNYTNVPTDTHLLTWSKSFNKDCNQVESGCFN 180
Query: 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPA 225
S +ILCKPS+EAIE AI+IANVDP+KT+FFDDSARNIAS KAAGL+TVIVG S VP A
Sbjct: 181 SKTQILCKPSVEAIEAAIQIANVDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGA 240
Query: 226 DHALNSIHNIKEAIPEIWEGEGEQLEQVIQPAAVETAVLA 265
D+ALNSIHNIKEA+P+IWE EGE L+Q+IQ AVET VLA
Sbjct: 241 DYALNSIHNIKEALPKIWEVEGE-LQQMIQSPAVETMVLA 279
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388509590|gb|AFK42861.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/265 (71%), Positives = 213/265 (80%), Gaps = 16/265 (6%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MDT R YECLLFD+DDTLYPLS G NLACR+NI+E+M +HLHI+ES+VP+MCL+L
Sbjct: 9 MDTQ-RIAGVKYECLLFDMDDTLYPLSLGINLACRKNIQEYMLEHLHIEESKVPKMCLDL 67
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
Y EHGTTMAG+KA+GYEFDND+FHA+VHG+LPYEKLKPD VLRNLLLSMPQRKIIFTNAD
Sbjct: 68 YLEHGTTMAGMKALGYEFDNDDFHAYVHGRLPYEKLKPDFVLRNLLLSMPQRKIIFTNAD 127
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 180
HA+EVL RLGLEDCFEGIICFET+NP +S QRILCKPS+EA E
Sbjct: 128 HTHAIEVLSRLGLEDCFEGIICFETLNP---------------INSYQRILCKPSVEAFE 172
Query: 181 TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 240
AIRI NVDPKKTIFFDDS RN+AS K AGLHTVIVG S VP ADHALNSIHNI+EA+P
Sbjct: 173 AAIRIVNVDPKKTIFFDDSVRNVASGKVAGLHTVIVGRSDLVPGADHALNSIHNIREALP 232
Query: 241 EIWEGEGEQLEQVIQPAAVETAVLA 265
EIWE E +Q+I+ AVE V A
Sbjct: 233 EIWEVEECNQQQMIRSLAVEATVHA 257
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297744067|emb|CBI37037.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/266 (73%), Positives = 220/266 (82%), Gaps = 15/266 (5%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MD + + A YECLLFD+DDTLYP+S+G NLACR+NIE++M QHL+I+ESEVPRMCLEL
Sbjct: 51 MDAVEGSNRAKYECLLFDMDDTLYPMSSGLNLACRKNIEDYMLQHLNIEESEVPRMCLEL 110
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
YRE+GTTMAGLKA+GYEFD+DEFHA+VHG+LPYE LKPDPVLRNLLLSMPQRKIIFTNAD
Sbjct: 111 YREYGTTMAGLKALGYEFDDDEFHAYVHGRLPYESLKPDPVLRNLLLSMPQRKIIFTNAD 170
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 180
++HA +VL RLGLE CFEG+ICFET+NP +P + + +E N AIE
Sbjct: 171 REHAAQVLNRLGLEGCFEGVICFETLNPPPEPTEYNEELEGNG--------------AIE 216
Query: 181 TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 240
AIRIANVDPKKTIFFDDSARNI S KAAGLHTVIVGSSV VP ADHAL SIHNIKEA+P
Sbjct: 217 AAIRIANVDPKKTIFFDDSARNITSGKAAGLHTVIVGSSVLVPGADHALGSIHNIKEALP 276
Query: 241 EIW-EGEGEQLEQVIQPAAVETAVLA 265
EIW EGEQLEQVIQ AVET VLA
Sbjct: 277 EIWEGEEGEQLEQVIQSTAVETVVLA 302
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79456826|ref|NP_191763.3| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gi|6899902|emb|CAB71911.1| putative protein [Arabidopsis thaliana] gi|38603864|gb|AAR24677.1| At3g62040 [Arabidopsis thaliana] gi|332646779|gb|AEE80300.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 184/267 (68%), Positives = 210/267 (78%), Gaps = 20/267 (7%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MD G ANYECL FD+DDTLYPLS G NLACR NI+EFM L I+ESEVP++CL+L
Sbjct: 1 MDGFG----ANYECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDL 56
Query: 61 YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNAD 120
Y+E+GTTMAGLK +GYEFDNDEFH +VHG+LPYEKLKPDP+LRNLLLSMP RKIIFTNAD
Sbjct: 57 YKEYGTTMAGLKVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNAD 116
Query: 121 QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE 180
+ HA L RLGLEDCFEGIICFET+NP S SN +ILCKPS+EA E
Sbjct: 117 KAHATRALNRLGLEDCFEGIICFETLNP--------------SSDSNTQILCKPSVEAFE 162
Query: 181 TAIRIAN-VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 239
AIRIA+ VDP+KTIFFDDS RNIASAKA GL TV VG SV VP AD+AL+SIHNIKEAI
Sbjct: 163 AAIRIADIVDPRKTIFFDDSIRNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAI 222
Query: 240 PEIWE-GEGEQLEQVIQPAAVETAVLA 265
P++WE + E+LE ++Q AAV T V A
Sbjct: 223 PDLWEDNKDEKLEPIVQQAAVATMVNA 249
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 265 | ||||||
| TAIR|locus:2079522 | 249 | AT3G62040 [Arabidopsis thalian | 0.913 | 0.971 | 0.701 | 8.1e-92 | |
| TAIR|locus:2185223 | 280 | AT5G02230 [Arabidopsis thalian | 0.984 | 0.932 | 0.516 | 6.1e-71 | |
| TAIR|locus:2148358 | 266 | AT5G59490 [Arabidopsis thalian | 0.943 | 0.939 | 0.542 | 3.3e-70 | |
| TAIR|locus:2148343 | 282 | AT5G59480 [Arabidopsis thalian | 0.966 | 0.907 | 0.511 | 5.5e-70 | |
| TAIR|locus:2045422 | 263 | AT2G32150 [Arabidopsis thalian | 0.837 | 0.844 | 0.465 | 1.2e-56 | |
| DICTYBASE|DDB_G0293862 | 249 | DDB_G0293862 "haloacid dehalog | 0.464 | 0.493 | 0.377 | 1.7e-27 | |
| POMBASE|SPAC24B11.05 | 226 | SPAC24B11.05 "pyrimidine 5'-nu | 0.471 | 0.553 | 0.403 | 8.2e-26 | |
| TIGR_CMR|SPO_1374 | 214 | SPO_1374 "pyrimidine 5'-nucleo | 0.554 | 0.686 | 0.281 | 1.8e-18 | |
| UNIPROTKB|G4MVR5 | 238 | MGG_01783 "Uncharacterized pro | 0.781 | 0.869 | 0.295 | 6.7e-17 | |
| SGD|S000003192 | 280 | SDT1 "Pyrimidine nucleotidase" | 0.698 | 0.660 | 0.292 | 3.7e-16 |
| TAIR|locus:2079522 AT3G62040 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 915 (327.2 bits), Expect = 8.1e-92, P = 8.1e-92
Identities = 181/258 (70%), Positives = 207/258 (80%)
Query: 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA 69
ANYECL FD+DDTLYPLS G NLACR NI+EFM L I+ESEVP++CL+LY+E+GTTMA
Sbjct: 6 ANYECLFFDMDDTLYPLSIGINLACRNNIQEFMLNQLGIEESEVPKLCLDLYKEYGTTMA 65
Query: 70 GLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLG 129
GLK +GYEFDNDEFH +VHG+LPYEKLKPDP+LRNLLLSMP RKIIFTNAD+ HA L
Sbjct: 66 GLKVMGYEFDNDEFHEYVHGRLPYEKLKPDPLLRNLLLSMPHRKIIFTNADKAHATRALN 125
Query: 130 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN-V 188
RLGLEDCFEGIICFET+NP S SN +ILCKPS+EA E AIRIA+ V
Sbjct: 126 RLGLEDCFEGIICFETLNP--------------SSDSNTQILCKPSVEAFEAAIRIADIV 171
Query: 189 DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE-GEG 247
DP+KTIFFDDS RNIASAKA GL TV VG SV VP AD+AL+SIHNIKEAIP++WE +
Sbjct: 172 DPRKTIFFDDSIRNIASAKATGLKTVFVGESVLVPGADYALSSIHNIKEAIPDLWEDNKD 231
Query: 248 EQLEQVIQPAAVETAVLA 265
E+LE ++Q AAV T V A
Sbjct: 232 EKLEPIVQQAAVATMVNA 249
|
|
| TAIR|locus:2185223 AT5G02230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 141/273 (51%), Positives = 192/273 (70%)
Query: 5 GRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH 64
G T+ Y+CLLFDLDDTLYPLS+G C NI+++M++ L I + ++ + LY+ +
Sbjct: 8 GLATSQKYDCLLFDLDDTLYPLSSGIARECGNNIKDYMTEKLGIPKDKIVELSDLLYKNY 67
Query: 65 GTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHA 124
GTTMAGL+A+GYEFD DE+H+FVHG+LPY+ +KPD VLR+LLLS+P RK+IFTNAD+ HA
Sbjct: 68 GTTMAGLRAIGYEFDYDEYHSFVHGRLPYDNIKPDLVLRSLLLSLPLRKVIFTNADRVHA 127
Query: 125 MEVLGRLGLEDCFEGIICFETIN-PRLQPADNTDGIEN--NSFSSNQRI--------LCK 173
+ L +LGLEDCFEGIICFET+N A N I + F+ ++ + +CK
Sbjct: 128 AKALKKLGLEDCFEGIICFETLNLMHTNAASNNSEIFDIVGHFNRSEPVGSLPKTPVVCK 187
Query: 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH 233
PS AIE A+ IAN+DP +T+FF+DS RN+ + K GL+TV+VG S V AD+AL +IH
Sbjct: 188 PSESAIEKALEIANIDPNRTLFFEDSVRNVQAGKRVGLYTVLVGKSTKVKGADYALENIH 247
Query: 234 NIKEAIPEIWEGEGEQLEQVIQ-PAAVETAVLA 265
N+KEAIPE+WE + + + AVET+V A
Sbjct: 248 NMKEAIPELWESDRKSSDVGYSGKVAVETSVRA 280
|
|
| TAIR|locus:2148358 AT5G59490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
Identities = 141/260 (54%), Positives = 184/260 (70%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 71
YECLLFDLDDTLYPLS+G + AC NI E+M + L IDE V + LY+++GT+MAGL
Sbjct: 11 YECLLFDLDDTLYPLSSGLSDACSNNIIEYMVEKLGIDEDGVVELNQILYKKYGTSMAGL 70
Query: 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 131
KAVGYEFDNDE+H +VHG+LPYE LKPDPVLR+LLL +P RK++F+N D+ H M+ L RL
Sbjct: 71 KAVGYEFDNDEYHRYVHGRLPYENLKPDPVLRSLLLGLPLRKLVFSNGDEVHVMKALTRL 130
Query: 132 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191
G+EDCFE II FET+NP + A+ + N ++CKP+ A E A IA ++P
Sbjct: 131 GIEDCFERIISFETLNPDINEAELS--CVTGHLPENP-VICKPTEIAFEKAFDIAQLNPH 187
Query: 192 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG------ 245
KT+FFDDS RNI + KA GLHTV+VG S + +D+AL SIHN+KEA PE+W
Sbjct: 188 KTLFFDDSTRNIQTGKAVGLHTVLVGKSEKIDGSDYALESIHNMKEAFPELWSESIINNK 247
Query: 246 EGEQLEQVIQPAAVETAVLA 265
E E+++ Q ++ET+V A
Sbjct: 248 ETERIDYASQ-ISIETSVQA 266
|
|
| TAIR|locus:2148343 AT5G59480 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 139/272 (51%), Positives = 192/272 (70%)
Query: 6 RTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG 65
+T+ A Y+CLLFD+DDTLYPLS+G + ++NI+E+M Q L I+E +V +CL LY+ +G
Sbjct: 9 QTSEAKYDCLLFDIDDTLYPLSSGLAMEVKKNIQEYMVQKLGIEEDKVQELCLSLYKIYG 68
Query: 66 TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAM 125
TTMAGLKAVGY+FD D+FH FVHG+LPY LKPDP+LRN++LS+P RK++FTNAD+ HA
Sbjct: 69 TTMAGLKAVGYDFDYDDFHRFVHGRLPYSTLKPDPILRNIILSLPIRKVVFTNADKAHAA 128
Query: 126 EVLGRLGLEDCFEGIICFETINPRLQ---PADN-TDGI-ENNSFSSNQ---------RIL 171
+++ RLGLE CFE II FET+NP + P D T I + S+ +N ++
Sbjct: 129 KIIARLGLEGCFEKIISFETLNPITKTESPVDTKTREIFDIISYMANPDSSIELPKTSVV 188
Query: 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 231
CKPS A E ++AN++PKKT+FFDDS RNI + K GLHTV VG+S D AL
Sbjct: 189 CKPSEGAFEQVFKMANINPKKTLFFDDSIRNIQTGKRVGLHTVWVGTSHREEGVDIALEH 248
Query: 232 IHNIKEAIPEIWEGEGEQLEQVI--QPAAVET 261
IHNI+EA+P++W+ ++ +++ Q A+ET
Sbjct: 249 IHNIREALPQLWDAVDDKAKEIRTRQKVAIET 280
|
|
| TAIR|locus:2045422 AT2G32150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 107/230 (46%), Positives = 161/230 (70%)
Query: 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA 73
CL+FDLDDTLYPL TG A ++NI++F+ + ES+ + +EL++ +G+T+AGL+A
Sbjct: 8 CLIFDLDDTLYPLKTGIAPAVKKNIDDFLVEKFGFSESKASSLRVELFKTYGSTLAGLRA 67
Query: 74 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 133
+G++ DE+H+FVHG+LPY ++P+ LRNLL + QRKIIFTN+D+ HA++VL +LGL
Sbjct: 68 LGHDVHPDEYHSFVHGRLPYGSIEPNNKLRNLLNKIKQRKIIFTNSDKNHAVKVLKKLGL 127
Query: 134 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT 193
EDCFE +ICFET+NP L + + ++ KPSL A++ IR+ANVDP++T
Sbjct: 128 EDCFEEMICFETMNPNL--------FGSTTRPDEYPVVLKPSLTAMDICIRVANVDPRRT 179
Query: 194 IFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243
+F DD+ NI + K+ GL T++VG + AD+A+ ++ I A+PEIW
Sbjct: 180 VFLDDNIHNITAGKSVGLRTILVGRAEKTKDADYAVETVTEIATAVPEIW 229
|
|
| DICTYBASE|DDB_G0293862 DDB_G0293862 "haloacid dehalogenase-like hydrolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 201 (75.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 48/127 (37%), Positives = 72/127 (56%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
LLFDLD+TLYP S G I ++MS L++ EV ++ Y+ +G T+ GL +
Sbjct: 24 LLFDLDNTLYPKSCGLAAQVSNRITQYMSIILNLPMEEVDKVRNHYYKTYGLTLKGLM-M 82
Query: 75 GYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQ--RKIIFTNADQKHAMEVLGRL 131
+E + D++ +VHG L + LKPD L L S+ +K+IF+NAD H V L
Sbjct: 83 NHEVNIDKYLDYVHGGLDLKSHLKPDARLHACLKSVKSGVKKVIFSNADIGHCKRVTREL 142
Query: 132 GLEDCFE 138
++DCF+
Sbjct: 143 EIDDCFD 149
|
|
| POMBASE|SPAC24B11.05 SPAC24B11.05 "pyrimidine 5'-nucleotidase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 194 (73.4 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 52/129 (40%), Positives = 69/129 (53%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
+ FDLD+ LYP S + I F S L I E R+ YR +G + GL +
Sbjct: 8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VL 66
Query: 75 GYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQR-KI-IFTNADQKHAMEVLGRL 131
+E D ++ V LP EK +K D VLR +LL + ++ K IFTNA HA VL L
Sbjct: 67 HHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYL 126
Query: 132 GLEDCFEGI 140
G+EDCF+GI
Sbjct: 127 GIEDCFDGI 135
|
|
| TIGR_CMR|SPO_1374 SPO_1374 "pyrimidine 5'-nucleotidase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 163 (62.4 bits), Expect = 1.8e-18, Sum P(2) = 1.8e-18
Identities = 42/149 (28%), Positives = 73/149 (48%)
Query: 4 MGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE 63
M R ++ +FDLD+TLYP + + ++ + L + +E R+ +R+
Sbjct: 1 MVREAFSHVTTWVFDLDNTLYPPAMRLFDQIEVRMTAYVMEALGVTRAEADRLRAHYWRQ 60
Query: 64 HGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKH 123
+GTT+AGL + D D + VH ++ + PD L + + ++P R+I++TN +
Sbjct: 61 YGTTLAGLMRE-HGLDPDPYLVAVH-EVDMSHMTPDTALASHIRALPGRRIVYTNGSAPY 118
Query: 124 AMEVLGRLGLEDCFEGIICFETINPRLQP 152
A VL GL F+ I E R +P
Sbjct: 119 AERVLAARGLTGLFDAIYGVEHAGYRPKP 147
|
|
| UNIPROTKB|G4MVR5 MGG_01783 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
Identities = 70/237 (29%), Positives = 112/237 (47%)
Query: 17 FDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGY 76
FD+D+ LYP S + I+++ ++HL + E R+ E Y+ +G + GL +
Sbjct: 21 FDIDNCLYPKSAKVHDRMADLIDKYFAEHLSLSWDEAVRLHKEYYQNYGLAIEGLVR-HH 79
Query: 77 EFDNDEFHAFVHGKLPYEKL-KPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLG 132
+ D E+++ V LP E + KP+P LR +L + + K+ +FTNA HA V+ L
Sbjct: 80 QIDPLEYNSKVDDALPLEGIIKPNPQLRKMLEDIDRSKVKLWLFTNAYVNHARRVVRLLE 139
Query: 133 LEDCFEGII-CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191
+ED F+GI C P L + D N A+ A + NVD
Sbjct: 140 IEDLFDGITYCDYAAQP-LVCKPHEDAFAN----------------AMRDA-GVENVDD- 180
Query: 192 KTIFFDDSARNIASAKAAGLHTV-IVGSSVPVP--PAD-HALNSIHNIKEAIPEIWE 244
F DD+ +N A G HT +V V VP PA H + S+ ++ P++++
Sbjct: 181 -CYFVDDNYQNCRKANEIGWHTAHLVEEGVKVPRTPASKHQIRSLEELRNVFPDVFK 236
|
|
| SGD|S000003192 SDT1 "Pyrimidine nucleotidase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 62/212 (29%), Positives = 103/212 (48%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 70
N + FD+D+ LY ST + +++I F HL + + + Y+E+G + G
Sbjct: 54 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRG 113
Query: 71 LKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQR-KI----IFTNADQKHA 124
L + ++ + E++ V LP + LKPD LRN+LL + Q KI +FTNA + HA
Sbjct: 114 L-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHA 172
Query: 125 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184
+ L LG+ D F DG+ +S ++CKP ++A E A++
Sbjct: 173 IRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKPHVKAFEKAMK 213
Query: 185 IANVDPKKTIFF-DDSARNIASAKAAGLHTVI 215
+ + + +F DDS +NI + G+ T I
Sbjct: 214 ESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.1.3.68 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 265 | |||
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 1e-91 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 4e-30 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 2e-22 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 1e-21 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-16 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 6e-12 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 8e-11 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 1e-08 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-07 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 2e-07 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 3e-05 | |
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 3e-04 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 4e-04 | |
| PRK09456 | 199 | PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Pro | 7e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 0.003 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 268 bits (687), Expect = 1e-91
Identities = 104/204 (50%), Positives = 132/204 (64%), Gaps = 21/204 (10%)
Query: 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK 72
+ FDLD+TLYP S G L RNI EF++ L + E + + Y+E+GTT+AGL
Sbjct: 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSPEEARVLRKDYYKEYGTTLAGLM 60
Query: 73 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLG 132
+ +E D DE+ +VHG+LPY+KLKPDP LRNLLL +P RKIIFTN D+ HA L RLG
Sbjct: 61 IL-HEIDADEYLRYVHGRLPYDKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALRRLG 119
Query: 133 LEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK 192
+EDCF+GI CF+T NP L L KPS +A E A+R A VDP++
Sbjct: 120 IEDCFDGIFCFDTANPDL--------------------LPKPSPQAYEKALREAGVDPER 159
Query: 193 TIFFDDSARNIASAKAAGLHTVIV 216
IFFDDSARNIA+ KA G+ TV+V
Sbjct: 160 AIFFDDSARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 4e-30
Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 34/207 (16%)
Query: 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-EHGTTMAGLK 72
+LFDLD L + R + L + E + L ++ ++G TM+
Sbjct: 1 AVLFDLDGVLVDTAHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTMSAED 60
Query: 73 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR---KIIFTNADQKHAMEVLG 129
A F LKP P +R LL ++ R + TN+ + A VL
Sbjct: 61 AQLLYK-----QLFYEALEKEG-LKPLPGVRALLEALRARGKKLALLTNSPRADAKLVL- 113
Query: 130 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 189
LGL F+ +I S+ L KP + A++ +
Sbjct: 114 ELGLRALFDVVID-----------------------SSDVGLGKPDPDIYLQALKKLGLK 150
Query: 190 PKKTIFFDDSARNIASAKAAGLHTVIV 216
P + +F DDS I +AKAAG+HTV+V
Sbjct: 151 PSECLFVDDSPAGIDAAKAAGMHTVLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 90.9 bits (226), Expect = 2e-22
Identities = 43/208 (20%), Positives = 82/208 (39%), Gaps = 38/208 (18%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA- 73
++FDLD TL F+ + + ++ L +D S + +A L
Sbjct: 1 IIFDLDGTLID----FDPVIFEALRDLAAERLGLDISAE-ELREAGGLPFDEALADLLRE 55
Query: 74 --VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ---RKIIFTNADQKHAMEVL 128
+ + + + +L+P P + LL + + +I +N ++ +L
Sbjct: 56 HPIDPDEILEALLEY----NLESRLEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLL 111
Query: 129 GRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV 188
+LGL D F+ + + + R KP EA E + +
Sbjct: 112 EKLGLLDLFDAVFTSDDVGAR-----------------------KPDPEAYERVLERLGL 148
Query: 189 DPKKTIFFDDSARNIASAKAAGLHTVIV 216
P++ +F DDS ++ +A+AAG+ TV V
Sbjct: 149 PPEEILFIDDSPEDLEAARAAGIKTVHV 176
|
Length = 176 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 90.0 bits (223), Expect = 1e-21
Identities = 57/243 (23%), Positives = 87/243 (35%), Gaps = 38/243 (15%)
Query: 15 LLFDLDDTLYPLSTGFNLAC-----RRNIEEFMSQH---LHIDESEVPRMCLELYREHGT 66
+LFDLD TL + A + E + + I++ E + E E+G
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 67 TMAGLKAVGYEFDNDEFHAFVHGKLP-YEKLKPDPVLRNLLLSMPQRK---IIFTNADQK 122
T+ L + DE V L KL PD L +K I TN +
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGARP 126
Query: 123 HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182
H L +LGL D F+ + E + + KP E E A
Sbjct: 127 HQERKLRQLGLLDYFDAVFISEDVG-----------------------VAKPDPEIFEYA 163
Query: 183 IRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV--GSSVPVPPADHALNSIHNIKEAI 239
+ V P++ +F DS N I A+A G+ TV + G + I ++ E +
Sbjct: 164 LEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELL 223
Query: 240 PEI 242
+
Sbjct: 224 DLL 226
|
Length = 229 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 75.1 bits (185), Expect = 2e-16
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 16 LFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAG---- 70
FDLDDTL ++G RRN E + + L++D E L+L +E+G+
Sbjct: 6 FFDLDDTLID-TSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDY 64
Query: 71 -LKAVGYEFDNDEFHAFV--HGKLPYEKLKPDPVLRNLLLSMPQ---RKIIFTNADQKHA 124
++ + E++ AFV + KL + L+ P +R+ L+ + + R I T+
Sbjct: 65 LIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQ 124
Query: 125 MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184
E L RLG+ D F+ +I E G+E KP + A++
Sbjct: 125 WEKLERLGVRDFFDAVITSEEE-----------GVE------------KPHPKIFYAALK 161
Query: 185 IANVDPKKTIFFDDSA-RNIASAKAAGLHTV 214
V P++ + D ++I AK G+ TV
Sbjct: 162 RLGVKPEEAVMVGDRLDKDIKGAKNLGMKTV 192
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 6e-12
Identities = 56/246 (22%), Positives = 90/246 (36%), Gaps = 35/246 (14%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 71
+ ++FD+D TL + + L R +E + I + E+ + + L
Sbjct: 2 IKAVIFDMDGTL--VDSEP-LHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKL 58
Query: 72 KAVGYEFDNDEFHA--FVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF---TNADQKHAME 126
A D E + L E LKP P + LL + R I +++ ++ A
Sbjct: 59 AAGEDPADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAER 118
Query: 127 VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 186
VL RLGL D F+ I+ D KP+ + A
Sbjct: 119 VLARLGLLDYFDVIV------------TADDVARG-----------KPAPDIYLLAAERL 155
Query: 187 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEA----IPEI 242
VDP++ + +DS I +AKAAG+ V V + P D + +P +
Sbjct: 156 GVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLLDLAELPAL 215
Query: 243 WEGEGE 248
E G
Sbjct: 216 LEARGI 221
|
Length = 221 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 8e-11
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 114 IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC- 172
+ TN ++ +E+L LGL+D F+ +I + F
Sbjct: 44 ALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYY--------PKEGLFLGGGPFDIG 95
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
KP+ + + A+++ VDP++ + DS +I AKAAG V V
Sbjct: 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-08
Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 26/131 (19%)
Query: 115 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174
I TN ++ +L LGL D F+ I+ + + P KP
Sbjct: 110 IVTNKPERELDILLKALGLADYFDVIVGGDDVPPP-----------------------KP 146
Query: 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADH-ALNS 231
E + + +DP++ + DS +I +AKAAG+ V V G + A A
Sbjct: 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVV 206
Query: 232 IHNIKEAIPEI 242
I ++ E + +
Sbjct: 207 IDSLAELLALL 217
|
Length = 220 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-07
Identities = 35/213 (16%), Positives = 61/213 (28%), Gaps = 40/213 (18%)
Query: 12 YECLLFDLDDTLYPLST--GFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA 69
+ ++FDLD TL A + + + E +
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRR---LL 57
Query: 70 GLKAVGYEFDNDEFHAFVHGKLPYEK---------LKPDPVLRNLLLSMPQRKI---IFT 117
G E + A + P R L + + I I T
Sbjct: 58 LRALAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILT 117
Query: 118 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 177
++ A + LGL F+ ++ + + KP +
Sbjct: 118 GDNRLTANAIARLLGL---FDALVSADLYGLV--------------------GVGKPDPK 154
Query: 178 AIETAIRIANVDPKKTIFFDDSARNIASAKAAG 210
E A+ V P++ + D +I +AKAAG
Sbjct: 155 IFELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 2e-07
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--------PVPP 224
KP+ + A+ VDP++ + DS +I +A+AAG+ T++V + V
Sbjct: 4 KPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVLTGVTTAEDLERAPGR 63
Query: 225 ADHALNSIHNI 235
D+ ++S+ ++
Sbjct: 64 PDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (104), Expect = 3e-05
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 25/112 (22%)
Query: 117 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176
TN +L LG+ D F +I +++ + KP
Sbjct: 116 TNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK-----------------------KPDP 152
Query: 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPAD 226
+ A +DP++ +F DS +I +A+AAG +V V G + P A
Sbjct: 153 APLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIAL 204
|
Length = 226 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 3e-04
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADH 227
KPS + A + NV+P + +DS + + KAAG+ + V S+P AD
Sbjct: 150 KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAV-PSIPKQTHLYSSADE 208
Query: 228 ALNSIHNIKEAIPEIW 243
+NS+ +++ PE W
Sbjct: 209 VINSLLDLQ---PEKW 221
|
Length = 382 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 4e-04
Identities = 39/201 (19%), Positives = 65/201 (32%), Gaps = 45/201 (22%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMS-----QHLHIDESEVPRMCLELYREHGTTMA 69
+LFD+D TL + A + EEF + L + + E
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTFEEFGLNPAAFKRLKALRGLAEELLWRIATEA----- 56
Query: 70 GLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLG 129
L+ + D A++ G +L L + + I +N + +L
Sbjct: 57 -LEELQGHIGYDAEEAYIPG--------AADLLPRLKEA-GIKLGIISNGSLRAQKLLLR 106
Query: 130 RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD 189
+ GL D FE I+ +D KP E A+ V
Sbjct: 107 KHGLGDYFELILG----------SDEIGS--------------KPEPEIFLAALESLGVP 142
Query: 190 PKKTIFFDDSARNIASAKAAG 210
P + + D+ +I A+ AG
Sbjct: 143 P-EVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|181872 PRK09456, PRK09456, ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 7e-04
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP 223
KP + ++ +FFDD+A NI +A A G+ +++V +P
Sbjct: 141 KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIP 191
|
Length = 199 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.003
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSV---------PV 222
KPS E A+ +D + + D I AKAAGL T++V + V V
Sbjct: 190 KPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEV 249
Query: 223 PPADHALNSIHNIKEAIPEI 242
P + ++S+ + A+ E+
Sbjct: 250 KP-TYVVDSLAELITALKEL 268
|
Length = 269 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 265 | |||
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.97 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.96 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.96 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.96 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.96 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.95 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.95 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.95 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.95 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 99.95 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.95 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.95 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.95 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.95 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.95 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.95 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.94 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.94 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.94 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.94 | |
| PLN02940 | 382 | riboflavin kinase | 99.94 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.93 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.93 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.93 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.93 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.92 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.92 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.91 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.91 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.91 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.91 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.9 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.89 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.89 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.88 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.88 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.88 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.88 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.87 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.86 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.85 | |
| PLN02811 | 220 | hydrolase | 99.84 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.84 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.84 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.83 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.82 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.82 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.81 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.81 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.8 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.78 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.78 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.77 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.76 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.76 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.75 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.75 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.74 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.74 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.7 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.7 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.7 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.69 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.69 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.68 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.67 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.66 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.64 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.63 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.63 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.63 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.62 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.61 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.61 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.6 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.59 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.58 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.58 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.57 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.57 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.56 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.54 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.54 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.54 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.53 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.53 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.5 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.47 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.46 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.45 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.43 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.41 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.4 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.4 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.39 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.38 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.37 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.37 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.37 | |
| PLN02887 | 580 | hydrolase family protein | 99.35 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.34 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.31 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.3 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.29 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.29 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.27 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 99.27 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.27 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.26 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.26 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.25 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.24 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.19 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.16 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.12 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.09 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.07 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.07 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.06 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.03 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.02 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.01 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.95 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 98.91 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.91 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 98.91 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.84 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.83 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 98.8 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.76 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.72 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 98.72 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.62 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.62 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.6 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.58 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.58 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.57 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.56 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.53 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.51 | |
| PLN02423 | 245 | phosphomannomutase | 98.4 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.38 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 98.38 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.35 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.34 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.33 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.29 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.13 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.13 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.1 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.05 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 97.99 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.96 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.9 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 97.89 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.87 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 97.8 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 97.8 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.78 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 97.75 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 97.73 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 97.67 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 97.62 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 97.58 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 97.58 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 97.54 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 97.53 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 97.49 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 97.49 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 97.46 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.43 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 97.39 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 97.36 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 97.34 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.33 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.3 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.25 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.25 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.24 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.14 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.01 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 96.97 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 96.96 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.85 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.71 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 96.68 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 96.65 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.64 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 96.37 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 96.26 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 96.11 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 96.07 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.0 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 95.98 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 95.83 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.21 | |
| PLN02151 | 354 | trehalose-phosphatase | 95.14 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 94.7 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 94.67 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 94.41 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 94.29 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 94.04 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 93.67 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 93.65 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 93.54 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 93.38 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 93.06 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 92.85 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 91.87 | |
| PLN02580 | 384 | trehalose-phosphatase | 91.73 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 90.11 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 89.26 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 88.93 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 88.72 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 87.82 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 86.93 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 84.47 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 83.87 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 83.49 | |
| PLN03017 | 366 | trehalose-phosphatase | 83.25 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 82.85 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 82.16 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 81.85 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 80.89 | |
| PF06014 | 62 | DUF910: Bacterial protein of unknown function (DUF | 80.54 |
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=201.88 Aligned_cols=221 Identities=59% Similarity=1.010 Sum_probs=205.7
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhc
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG 89 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (265)
+++++++||+|.||++....+...+.+.+.+|+.+++|++......+...+++.||...+++...+...+.++++++.++
T Consensus 13 ~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL~~~~~~~d~deY~~~V~~ 92 (244)
T KOG3109|consen 13 PNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGLKAVGYIFDADEYHRFVHG 92 (244)
T ss_pred ccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHHHhhc
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChhHHHHHhcCCCc-EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 90 KLPYEKLKPDPVLRNLLLSMPQR-KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 90 ~~~~~~~~~~p~~~~~l~~l~~~-~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
.++++.++|.|.++++|-.++.+ .++.||+...++...|+.+|+.++|+.|++.+...+. +-
T Consensus 93 ~LPlq~LkPD~~LRnlLL~l~~r~k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~-----------------~~ 155 (244)
T KOG3109|consen 93 RLPLQDLKPDPVLRNLLLSLKKRRKWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI-----------------EK 155 (244)
T ss_pred cCcHhhcCCCHHHHHHHHhCccccEEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC-----------------CC
Confidence 99999999999999999999866 9999999999999999999999999999998755421 12
Q ss_pred ccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHhcCCh
Q 024578 169 RILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGEG 247 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~~~ 247 (265)
..++||.+++++.+.+..|++ |++++||+||.++|..|++.||+++++........+++++.+.....+.+.++++.+.
T Consensus 156 ~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~~~~~~~d~~l~~ih~~k~a~p~l~~~~~ 235 (244)
T KOG3109|consen 156 TVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGREHKIKGVDYALEQIHNNKEALPELWEILE 235 (244)
T ss_pred ceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEeeecccchHHHHHHhhchhhhchHHhhccc
Confidence 356799999999999999997 9999999999999999999999999999988889999999999999999999987653
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-29 Score=202.68 Aligned_cols=199 Identities=17% Similarity=0.211 Sum_probs=148.4
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCChHHHHHHHh
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFDNDEFHAFVH 88 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (265)
|++|+|+||+||||+|+...+..++.+ ..+.++....... .+....|...... .... ....+.+...+.
T Consensus 1 m~~~~viFD~DGTL~ds~~~~~~a~~~-----~~~~~~~~~~~~~----~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~ 70 (214)
T PRK13288 1 MKINTVLFDLDGTLINTNELIISSFLH-----TLKTYYPNQYKRE----DVLPFIGPSLHDTFSKID-ESKVEEMITTYR 70 (214)
T ss_pred CCccEEEEeCCCcCccCHHHHHHHHHH-----HHHHhCCCCCCHH----HHHHHhCcCHHHHHHhcC-HHHHHHHHHHHH
Confidence 368999999999999988877777776 3444443221111 1222334433322 1111 111222222221
Q ss_pred cc---ccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 89 GK---LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 89 ~~---~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
.. .......++||+.++|+.+ +.+++|+||+....+...++.+|+..+|+.++++++....
T Consensus 71 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~------------- 137 (214)
T PRK13288 71 EFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHA------------- 137 (214)
T ss_pred HHHHHhhhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCC-------------
Confidence 11 1123467899999999887 4789999999999999999999999999999998887764
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIK 236 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~ 236 (265)
||+++.+++++++++++|+++++|||+.+|+.+|+++|+.++++.++.. ...++++++++.++.
T Consensus 138 ----------Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~ 207 (214)
T PRK13288 138 ----------KPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLL 207 (214)
T ss_pred ----------CCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHH
Confidence 9999999999999999999999999999999999999999999988743 346899999999999
Q ss_pred HHHHH
Q 024578 237 EAIPE 241 (265)
Q Consensus 237 ~~l~~ 241 (265)
+++..
T Consensus 208 ~~i~~ 212 (214)
T PRK13288 208 AIVGD 212 (214)
T ss_pred HHHhh
Confidence 87754
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=200.15 Aligned_cols=198 Identities=20% Similarity=0.148 Sum_probs=147.3
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCC---h----
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD---N---- 80 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~---- 80 (265)
..|+|+|+||+||||+|+...+..++.. .++.+|.+......... ..|...... ........ .
T Consensus 9 ~~~~k~viFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 79 (229)
T PRK13226 9 VRFPRAVLFDLDGTLLDSAPDMLATVNA-----MLAARGRAPITLAQLRP----VVSKGARAMLAVAFPELDAAARDALI 79 (229)
T ss_pred cccCCEEEEcCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhhhHHHHHHHHHhccCChHHHHHHH
Confidence 3467999999999999988877777765 66777765433222211 122222111 11111111 1
Q ss_pred HHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 81 DEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
..+...+.+.+ .....++||+.++|+.| +.+++|+||+........++.+++..+|+.++++++.+..
T Consensus 80 ~~~~~~~~~~~-~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-------- 150 (229)
T PRK13226 80 PEFLQRYEALI-GTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAER-------- 150 (229)
T ss_pred HHHHHHHHHhh-hhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCC--------
Confidence 22233332222 13468899999999887 4789999999999999999999999999999888876654
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-------CCCCCceec
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-------VPPADHALN 230 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-------~~~a~~~v~ 230 (265)
||+|+++.++++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++
T Consensus 151 ---------------KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~ 215 (229)
T PRK13226 151 ---------------KPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE 215 (229)
T ss_pred ---------------CCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC
Confidence 9999999999999999999999999999999999999999999987753 246999999
Q ss_pred CHhHHHHHH
Q 024578 231 SIHNIKEAI 239 (265)
Q Consensus 231 ~~~el~~~l 239 (265)
++.+|.+.+
T Consensus 216 ~~~el~~~~ 224 (229)
T PRK13226 216 QPQLLWNPA 224 (229)
T ss_pred CHHHHHHHh
Confidence 999998865
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=190.37 Aligned_cols=183 Identities=58% Similarity=0.961 Sum_probs=149.0
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhccccC
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY 93 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (265)
+|+||+||||+|+...+..++.+++.++....+|++..........++..+|.....+... .....+.+...+.+....
T Consensus 2 ~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 80 (184)
T TIGR01993 2 VWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAGLMIL-HEIDADEYLRYVHGRLPY 80 (184)
T ss_pred eEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHHHHHh-hCCCHHHHHHHHhccCCH
Confidence 6999999999999999999998888877778889877665554444455556544443322 234556677777664444
Q ss_pred CCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 94 EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
..+.++||+.++|+.++.+++|+||++...+...++.+|+..+|+.++++++.+.. ...+|
T Consensus 81 ~~~~~~~g~~~~L~~L~~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~-------------------~~~~K 141 (184)
T TIGR01993 81 EKLKPDPELRNLLLRLPGRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD-------------------YLLPK 141 (184)
T ss_pred HhCCCCHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc-------------------cCCCC
Confidence 56789999999999999899999999999999999999999999999999877641 00139
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
|+|++|+.+++++|++|+++++|||+..|+.+|+++|+.++++
T Consensus 142 P~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 142 PSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred CCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 9999999999999999999999999999999999999999875
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-28 Score=198.80 Aligned_cols=201 Identities=22% Similarity=0.256 Sum_probs=152.4
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHH--cCCC------CCh
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA--VGYE------FDN 80 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~ 80 (265)
+|+++.|+||+||||+|+...+..++.. ..+.++.+....... ....|........ .+.. ...
T Consensus 1 ~~~~~~iiFDlDGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~ig~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T COG0546 1 MMMIKAILFDLDGTLVDSAEDILRAFNA-----ALAELGLPPLDEEEI----RQLIGLGLDELIERLLGEADEEAAAELV 71 (220)
T ss_pred CCCCCEEEEeCCCccccChHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhcCCHHHHHHHHhccccchhHHHHH
Confidence 3678999999999999999888888775 677788775333221 2222332221111 1110 011
Q ss_pred HHHHHHHhccccCC-CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 81 DEFHAFVHGKLPYE-KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
+.+...+.+.+... ...++||+.++|+.+ +++++|+||.+...++..++.+|+..+|+.++++++...+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~------- 144 (220)
T COG0546 72 ERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPP------- 144 (220)
T ss_pred HHHHHHHHHHHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCC-------
Confidence 22222222222111 257899999999888 5899999999999999999999999999999996666554
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceec
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALN 230 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~ 230 (265)
||+|..+..+++++|++|++++||||+.+|+.+|++||+.++++.+|.. ...+++++.
T Consensus 145 ----------------KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~ 208 (220)
T COG0546 145 ----------------KPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID 208 (220)
T ss_pred ----------------CcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC
Confidence 9999999999999999988999999999999999999999999988752 567999999
Q ss_pred CHhHHHHHHHH
Q 024578 231 SIHNIKEAIPE 241 (265)
Q Consensus 231 ~~~el~~~l~~ 241 (265)
++.||...+..
T Consensus 209 ~~~el~~~l~~ 219 (220)
T COG0546 209 SLAELLALLAE 219 (220)
T ss_pred CHHHHHHHHhc
Confidence 99999987753
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=199.21 Aligned_cols=194 Identities=23% Similarity=0.274 Sum_probs=142.8
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCC----ChhhHHHHHHHHHHHhcccHHHH-HHcCC-CCC---
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHI----DESEVPRMCLELYREHGTTMAGL-KAVGY-EFD--- 79 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~--- 79 (265)
..++|+|+||+||||+|+...+..++.+. .+.+|. +... .... ....|...... ..... ...
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~-----~~~~g~~~g~~~~~-~~~~---~~~~G~~~~~~~~~~~~~~~~~~~ 89 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREM-----LQEINFNGGVPITE-EFFV---ENIAGKHNEDIALGLFPDDLERGL 89 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHH-----HHHhccccCCCCCH-HHHH---HHcCCCCHHHHHHHHcCcchhhHH
Confidence 44689999999999999988888788764 344432 2211 1111 11123222211 11100 000
Q ss_pred --hHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 80 --NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 80 --~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
...+...+.+.. .....++||+.++|+.| +++++|+||+....++..++++++..+|+.++++++....
T Consensus 90 ~~~~~~~~~y~~~~-~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~----- 163 (248)
T PLN02770 90 KFTDDKEALFRKLA-SEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHA----- 163 (248)
T ss_pred HHHHHHHHHHHHHH-HhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCC-----
Confidence 011122222211 14578899999999887 5899999999999999999999999999999999988764
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCcee
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHAL 229 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v 229 (265)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++
T Consensus 164 ------------------KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi 225 (248)
T PLN02770 164 ------------------KPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLI 225 (248)
T ss_pred ------------------CCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEe
Confidence 9999999999999999999999999999999999999999999987643 45799999
Q ss_pred cCHhHH
Q 024578 230 NSIHNI 235 (265)
Q Consensus 230 ~~~~el 235 (265)
+++.++
T Consensus 226 ~~~~e~ 231 (248)
T PLN02770 226 KDYEDP 231 (248)
T ss_pred ccchhh
Confidence 999993
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=194.88 Aligned_cols=198 Identities=20% Similarity=0.206 Sum_probs=144.4
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHHHHcCCCCChHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGLKAVGYEFDNDEFH 84 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 84 (265)
+.+|+|+||+||||+|+...+..++.+ ..+.+|++..... .... ..+... ......+.....+.+.
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~-~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVT-----MFAEFGITLSLEE-VFKR---FKGVKLYEIIDIISKEHGVTLAKAELE 72 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHH-----HHHHcCCCCCHHH-HHHH---hcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 458999999999999987777777665 5566776543211 1111 112211 1223345554445554
Q ss_pred HHHhccc---cCCCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccc-eeeecCCCCCCCCCCCCCCCcc
Q 024578 85 AFVHGKL---PYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 85 ~~~~~~~---~~~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd-~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
..+.+.+ ......++||+.++|+.++.+++|+||+....+...++++++..+|+ .++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~----------- 141 (221)
T PRK10563 73 PVYRAEVARLFDSELEPIAGANALLESITVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRW----------- 141 (221)
T ss_pred HHHHHHHHHHHHccCCcCCCHHHHHHHcCCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCC-----------
Confidence 4333211 12457889999999999999999999999999999999999999996 67777777764
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIK 236 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~ 236 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++..+.. ...++.++.++.||.
T Consensus 142 ------------KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (221)
T PRK10563 142 ------------KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLP 209 (221)
T ss_pred ------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998864322 223445566666666
Q ss_pred HHH
Q 024578 237 EAI 239 (265)
Q Consensus 237 ~~l 239 (265)
+.+
T Consensus 210 ~~~ 212 (221)
T PRK10563 210 ELW 212 (221)
T ss_pred HHH
Confidence 543
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-27 Score=196.86 Aligned_cols=203 Identities=13% Similarity=0.067 Sum_probs=146.4
Q ss_pred cCCccEEEEecCCCccCCcccH-HHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH---------------HHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGF-NLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLK 72 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~ 72 (265)
||++|+|+||+||||+|+.... ..++.+ +++.+|.+... ... ....|.... ...
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~ 70 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVE-----AFAQFGVEITL-EEA----RGPMGLGKWDHIRALLKMPRVAARWQA 70 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHH-----HHHHcCCCCCH-HHH----HHhcCCCHHHHHHHHHhcHHHHHHHHH
Confidence 4568999999999999975433 455554 44556664322 111 111221110 011
Q ss_pred HcCCCCChHHHH-------HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-ceee
Q 024578 73 AVGYEFDNDEFH-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGII 141 (265)
Q Consensus 73 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~ 141 (265)
..+.......+. ..+.+.+ .....++||+.++|+.| +++++|+||.....+...++.+++..+| +.++
T Consensus 71 ~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~ 149 (267)
T PRK13478 71 VFGRLPTEADVDALYAAFEPLQIAKL-ADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVV 149 (267)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHH-hhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEE
Confidence 223322222221 1111111 24568899999999888 4899999999999999999998887774 8899
Q ss_pred ecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 142 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
++++.... ||+|+.+..+++++|+. |++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 150 ~~~~~~~~-----------------------KP~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~ 206 (267)
T PRK13478 150 TTDDVPAG-----------------------RPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSG 206 (267)
T ss_pred cCCcCCCC-----------------------CCChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCc
Confidence 88887664 99999999999999996 6999999999999999999999999998764
Q ss_pred C-----------------------------CCCCCceecCHhHHHHHHHHHhcC
Q 024578 221 P-----------------------------VPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 221 ~-----------------------------~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
. ..+++++++++.+|.+++..+..+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~ 260 (267)
T PRK13478 207 NELGLSEEEYQALSAAELAARRERARARLRAAGAHYVIDTIADLPAVIADIEAR 260 (267)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHH
Confidence 3 457999999999999988766443
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=190.09 Aligned_cols=196 Identities=15% Similarity=0.171 Sum_probs=144.9
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-H----HcCCCC-ChHHH--
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-K----AVGYEF-DNDEF-- 83 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~-~~~~~-- 83 (265)
+|+|+||+||||+|+.+.+..++.+ +.+.+|.+....... .. ..|.....+ . ..+... ..+.+
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQ-----AVTAAGLSPTPEEVQ-SA---WMGQSKIEAIRALLALDGADEAEAQAAFA 71 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHH-----HHHHcCCCCCHHHHH-Hh---hcCCCHHHHHHHHHhccCCCHHHHHHHHH
Confidence 5899999999999988888777776 445567654332111 10 123322221 1 112211 11112
Q ss_pred --HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc--cccceeeecCCCCCCCCCCCCC
Q 024578 84 --HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 84 --~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~--~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.+.+.+.+......++||+.++|+.+ +++++|+||+....+...++.+++. .+|+.++++++....
T Consensus 72 ~~~~~~~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~------- 144 (220)
T TIGR03351 72 DFEERLAEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAG------- 144 (220)
T ss_pred HHHHHHHHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCC-------
Confidence 22222222223468999999999988 4889999999999999999999998 999999999987663
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceE-EEECCCCC------CCCCCce
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP------VPPADHA 228 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~------~~~a~~~ 228 (265)
||+|+++..+++++|+. |++|++|||+.+|+.+|+++|+.+ +++.++.. ...++++
T Consensus 145 ----------------KP~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~ 208 (220)
T TIGR03351 145 ----------------RPAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHV 208 (220)
T ss_pred ----------------CCCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCcee
Confidence 99999999999999997 799999999999999999999999 88877643 3568899
Q ss_pred ecCHhHHHHHH
Q 024578 229 LNSIHNIKEAI 239 (265)
Q Consensus 229 v~~~~el~~~l 239 (265)
+.++.+|.+++
T Consensus 209 i~~~~~l~~~~ 219 (220)
T TIGR03351 209 LDSVADLPALL 219 (220)
T ss_pred ecCHHHHHHhh
Confidence 99999987754
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=190.24 Aligned_cols=200 Identities=27% Similarity=0.363 Sum_probs=139.7
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChh--hHHHHHHHHHHHhccc-----HHHHHHcCCCCChHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES--EVPRMCLELYREHGTT-----MAGLKAVGYEFDNDEF 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 83 (265)
|+++|+||+||||+|+.+.+..++...... ...+|.+.. .............+.. .......+........
T Consensus 1 ~~~~viFDlDGTL~ds~~~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (221)
T TIGR02253 1 MIKAIFFDLDDTLIDTSGLAEKARRNAIEV--LIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLV 78 (221)
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHH--HHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHH
Confidence 378999999999999888777665543222 334444422 2211111111222111 1111112211111111
Q ss_pred HHHHhc--cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 84 HAFVHG--KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 84 ~~~~~~--~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
...... ......+.++||+.++|+.| +.+++|+||+....+...++.+|+..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~--------- 149 (221)
T TIGR02253 79 AAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVE--------- 149 (221)
T ss_pred HHHHHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCC---------
Confidence 111111 01123468899999999987 4789999999999999999999999999999999988774
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC-------CCCCCceec
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADHALN 230 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~-------~~~a~~~v~ 230 (265)
||+++.|+.+++++|++|+++++|||+. +|+.+|+++|+.++++.++.. ...+++++.
T Consensus 150 --------------KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~ 215 (221)
T TIGR02253 150 --------------KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEIS 215 (221)
T ss_pred --------------CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeC
Confidence 9999999999999999999999999998 899999999999999987643 235788888
Q ss_pred CHhHH
Q 024578 231 SIHNI 235 (265)
Q Consensus 231 ~~~el 235 (265)
++.+|
T Consensus 216 ~~~el 220 (221)
T TIGR02253 216 SLREL 220 (221)
T ss_pred cHHhh
Confidence 88776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=192.14 Aligned_cols=196 Identities=19% Similarity=0.183 Sum_probs=145.9
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-----HHcCC-CCChHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGY-EFDNDE 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~ 82 (265)
.+++|+|+||+||||+|+.+.+..++.+ +.+.+|.+....... ....|...... ...+. ......
T Consensus 4 ~~~~k~iiFD~DGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 74 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRREEL----PDTLGLRIDQVVDLWYARQPWNGPSRQE 74 (222)
T ss_pred cccCcEEEEcCCCCCCcCHHHHHHHHHH-----HHHHCCCCCCHHHHH----HHhhCCCHHHHHHHHHHhcCCCCCCHHH
Confidence 4468999999999999988777777765 566677654332221 12222222111 11111 112222
Q ss_pred HHH----HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 83 FHA----FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 83 ~~~----~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
+.. .+.+. ......++||+.++|+.+ +.+++|+||+....++..++.+++..+|+.++++++.+..
T Consensus 75 ~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------ 147 (222)
T PRK10826 75 VVQRIIARVISL-IEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYS------ 147 (222)
T ss_pred HHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCC------
Confidence 222 22111 124578999999999887 4899999999999999999999999999999999887664
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceec
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALN 230 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~ 230 (265)
||+++.++.+++++|++|++|++|||+.+|+.+|+++|+.++++..+.. ...++.++.
T Consensus 148 -----------------Kp~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~ 210 (222)
T PRK10826 148 -----------------KPHPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE 210 (222)
T ss_pred -----------------CCCHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc
Confidence 9999999999999999999999999999999999999999999987653 236888999
Q ss_pred CHhHHHH
Q 024578 231 SIHNIKE 237 (265)
Q Consensus 231 ~~~el~~ 237 (265)
++.||..
T Consensus 211 ~~~dl~~ 217 (222)
T PRK10826 211 SLTELTA 217 (222)
T ss_pred CHHHHhh
Confidence 9999864
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-27 Score=189.69 Aligned_cols=191 Identities=24% Similarity=0.279 Sum_probs=142.3
Q ss_pred EEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChH---HH---
Q 024578 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDND---EF--- 83 (265)
Q Consensus 15 iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~--- 83 (265)
|+||+||||+|+...+..++.. ..+.+|.+....... ....|.... .+...+...+.. .+
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~-----~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNM-----ALAALGLPPATLARV----IGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKL 71 (213)
T ss_pred CeecCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhcccHHHHHHHHhhccccccChHHHHHHHHH
Confidence 6899999999988777776654 556677653332221 122233221 112222222221 22
Q ss_pred -HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 84 -HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 84 -~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
...+.+.. .....++||+.++|+.+ +.+++|+||+....++..++++++..+|+.++++++....
T Consensus 72 ~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------- 140 (213)
T TIGR01449 72 FDRHYEEVA-GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQR---------- 140 (213)
T ss_pred HHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCC----------
Confidence 22222211 13468899999999887 4789999999999999999999999999999998877664
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHh
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 233 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~ 233 (265)
||+|+.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.
T Consensus 141 -------------Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~ 207 (213)
T TIGR01449 141 -------------KPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLN 207 (213)
T ss_pred -------------CCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHH
Confidence 9999999999999999999999999999999999999999999977643 356899999999
Q ss_pred HHHHH
Q 024578 234 NIKEA 238 (265)
Q Consensus 234 el~~~ 238 (265)
+|..+
T Consensus 208 ~l~~~ 212 (213)
T TIGR01449 208 ELPPL 212 (213)
T ss_pred HHHhh
Confidence 98764
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=192.56 Aligned_cols=194 Identities=13% Similarity=0.057 Sum_probs=141.2
Q ss_pred ccEEEEecCCCccCCccc-HHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH---------------HHHHcC
Q 024578 12 YECLLFDLDDTLYPLSTG-FNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA---------------GLKAVG 75 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 75 (265)
+|+|+||+||||+|+... +..++.+ ..+.+|.+... ... ....|.... .....+
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~-----~~~~~g~~~~~-~~~----~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVE-----AFAEFGVQITL-EEA----RGPMGLGKWDHIRALLKMPAVAERWRAKFG 71 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHH-----HHHHcCCCccH-HHH----HHhcCccHHHHHHHHhcCHHHHHHHHHHhC
Confidence 689999999999997553 3455554 34556654321 111 111121110 112223
Q ss_pred CCCChHHHH---HHHh----ccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-ceeeecC
Q 024578 76 YEFDNDEFH---AFVH----GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFE 144 (265)
Q Consensus 76 ~~~~~~~~~---~~~~----~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~~~~ 144 (265)
.....+.+. ..+. +.+ .....++||+.++|+.| +++++|+||.....++..++.+++..+| +.+++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~ 150 (253)
T TIGR01422 72 RLPTEADIEAIYEAFEPLQLAKL-AEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTD 150 (253)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-HhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccc
Confidence 322222221 1221 111 24578999999999888 4889999999999999999999999885 8999998
Q ss_pred CCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCCC--
Q 024578 145 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-- 221 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-- 221 (265)
+.... ||+|+.+..+++++|+. |++|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 151 ~~~~~-----------------------KP~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~ 207 (253)
T TIGR01422 151 DVPAG-----------------------RPAPWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNEL 207 (253)
T ss_pred cCCCC-----------------------CCCHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCccc
Confidence 87764 99999999999999995 99999999999999999999999999987653
Q ss_pred ---------------------------CCCCCceecCHhHHHHHH
Q 024578 222 ---------------------------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 222 ---------------------------~~~a~~~v~~~~el~~~l 239 (265)
..+++++++++.+|.+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 208 GLSEEEYRALDPAELEARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred CCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 356899999999987754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=188.92 Aligned_cols=192 Identities=21% Similarity=0.218 Sum_probs=140.1
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCCCChHHHHHHHh
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYEFDNDEFHAFVH 88 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (265)
|++|+|+||+||||+|+...+..++.+ .++.+|++.... ... ..|.... .+.........+.+.+.+.
T Consensus 1 M~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~---~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~ 69 (218)
T PRK11587 1 MRCKGFLFDLDGTLVDSLPAVERAWSN-----WADRHGIAPDEV---LNF---IHGKQAITSLRHFMAGASEAEIQAEFT 69 (218)
T ss_pred CCCCEEEEcCCCCcCcCHHHHHHHHHH-----HHHHcCCCHHHH---HHH---HcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 357999999999999988888787776 566777754211 111 1132222 1122211112222222111
Q ss_pred c-----cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 89 G-----KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 89 ~-----~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
. ........++||+.++|+.| +++++|+||+........++..++ .+|+.++++++....
T Consensus 70 ~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~~~~~~----------- 137 (218)
T PRK11587 70 RLEQIEATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAERVKRG----------- 137 (218)
T ss_pred HHHHHHHhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHHHhcCC-----------
Confidence 1 11124678899999999887 489999999998888888888887 457888888776654
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 236 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~ 236 (265)
||+|+.+..+++++|++|++|++|||+..|+.+|+++|+.++++.++.. ...++++++++.+|.
T Consensus 138 ------------KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 138 ------------KPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQLT 204 (218)
T ss_pred ------------CCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhee
Confidence 9999999999999999999999999999999999999999999987643 346889999988874
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.6e-26 Score=185.64 Aligned_cols=204 Identities=17% Similarity=0.217 Sum_probs=143.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhccc-----HHH-HHHcCCCCChHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-----MAG-LKAVGYEFDNDE 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~ 82 (265)
.+.+|+|+||+||||+|+... ...+.+...+.+.+..|.+...............+.. ... ....+.. ...
T Consensus 7 ~~~~k~vIFDlDGTL~d~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 83 (224)
T PRK14988 7 WQDVDTVLLDMDGTLLDLAFD-NYFWQKLVPETLGAQRGISPQEAQEYIRQEYHAVQHTLNWYCLDYWSERLGLD--ICA 83 (224)
T ss_pred cccCCEEEEcCCCCccchhhh-chHHHhhHHHHHHHHhCcCHHHHHHHHHHHHHHHcCccceecHHHHHHHhCCC--HHH
Confidence 456899999999999995311 2233333334455777876543322211111111110 011 1111111 111
Q ss_pred HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 83 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+... ......++||+.++|+.+ +.+++|+||+....+...++++|+..+|+.++++++.+..
T Consensus 84 ~~~~-----~~~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~---------- 148 (224)
T PRK14988 84 MTTE-----QGPRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYP---------- 148 (224)
T ss_pred HHHH-----HhccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCC----------
Confidence 1111 124578899999999888 4789999999999999999999999999999999988764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCC--CCCCCceecCHhHHH
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP--VPPADHALNSIHNIK 236 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~--~~~a~~~v~~~~el~ 236 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+++ +++.++.. ...+.....+++++.
T Consensus 149 -------------KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 215 (224)
T PRK14988 149 -------------KEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYR 215 (224)
T ss_pred -------------CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCccchhccCCCcHHHHH
Confidence 99999999999999999999999999999999999999975 66766554 345666778888888
Q ss_pred HHHHHHh
Q 024578 237 EAIPEIW 243 (265)
Q Consensus 237 ~~l~~~~ 243 (265)
+++..++
T Consensus 216 ~~~~~l~ 222 (224)
T PRK14988 216 RLIPSLM 222 (224)
T ss_pred HHhhhhc
Confidence 8877764
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=192.05 Aligned_cols=203 Identities=13% Similarity=0.167 Sum_probs=147.5
Q ss_pred CccEEEEecCCCccCCcccHH-HHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHc-CCCCChH---HHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFN-LACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-GYEFDND---EFH 84 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~---~~~ 84 (265)
.+|+|+|||||||+||...++ .++.+ +.+.+|++...... .....|...... ... ....... .+.
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~-----~~~~~G~~~~~~e~----~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~ 93 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRA-----LAEEEGKRPPPAFL----LKRAEGMKNEQAISEVLCWSRDFLQMKRLA 93 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhccCCCHHHHHHHH
Confidence 589999999999999865544 45554 66677776433211 112234332221 111 1111111 111
Q ss_pred HHHhc---cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 85 AFVHG---KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 85 ~~~~~---~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
..+.. ........++||+.++|+.| +++++|+||.....++..++++++..+|+.++++++....
T Consensus 94 ~~~~~~~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~--------- 164 (260)
T PLN03243 94 IRKEDLYEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRG--------- 164 (260)
T ss_pred HHHHHHHHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCC---------
Confidence 11111 11113467899999999888 4899999999999999999999999999999999988764
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHH
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNI 235 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el 235 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+... ...+++++.++.+|
T Consensus 165 --------------KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el 230 (260)
T PLN03243 165 --------------KPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDL 230 (260)
T ss_pred --------------CCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHH
Confidence 9999999999999999999999999999999999999999999963221 34589999999998
Q ss_pred HHHHHHHhcC
Q 024578 236 KEAIPEIWEG 245 (265)
Q Consensus 236 ~~~l~~~~~~ 245 (265)
......-++-
T Consensus 231 ~~~~~~~~~~ 240 (260)
T PLN03243 231 SVVDLKNLSD 240 (260)
T ss_pred HHHHHhhhhc
Confidence 8766555443
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=185.64 Aligned_cols=193 Identities=20% Similarity=0.256 Sum_probs=143.6
Q ss_pred EEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHH-HHHcCCCCC-hHHHHHHHhcccc
Q 024578 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-LKAVGYEFD-NDEFHAFVHGKLP 92 (265)
Q Consensus 15 iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ 92 (265)
|+||+||||+|+...+..++.+.+. +..+.+...... .....|..... +...+.... ...+.....+ .
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~----~~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 70 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYR----EVVGDGPAPFEE----YRRHLGRYFPDIMRIMGLPLEMEEPFVRESYR--L 70 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHH----HhcCCCCCCHHH----HHHHhCccHHHHHHHcCCCHHHHHHHHHHHHH--h
Confidence 6899999999988888888876322 223543222221 12222333222 222332211 1112111211 1
Q ss_pred CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 93 YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 93 ~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++++||+.++|+.+ +.+++|+||+....+...++++++..+|+.++++++....
T Consensus 71 ~~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-------------------- 130 (205)
T TIGR01454 71 AGEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRP-------------------- 130 (205)
T ss_pred hcccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCC--------------------
Confidence 24678999999999987 5889999999999999999999999999999998877654
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~~~l~ 240 (265)
||+++.+..+++++|++|++|++|||+.+|+.+|+++|+.++++.+|.. ...++++++++.+|..++.
T Consensus 131 ---KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 131 ---KPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred ---CCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999988753 4568999999999987654
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-26 Score=185.88 Aligned_cols=201 Identities=20% Similarity=0.238 Sum_probs=148.6
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHH-----HHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 83 (265)
.+++++|+||+||||+|+...+..++.+ ..+.++.+......... ..+..... +...+...+.+..
T Consensus 3 ~~~~~~iiFD~DGTL~d~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (226)
T PRK13222 3 FMDIRAVAFDLDGTLVDSAPDLAAAVNA-----ALAALGLPPAGEERVRT----WVGNGADVLVERALTWAGREPDEELL 73 (226)
T ss_pred CCcCcEEEEcCCcccccCHHHHHHHHHH-----HHHHCCCCCCCHHHHHH----HhCccHHHHHHHHHhhccCCccHHHH
Confidence 4668999999999999987776666654 45566765433222211 12222111 1111122222222
Q ss_pred H-------HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCC
Q 024578 84 H-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 153 (265)
Q Consensus 84 ~-------~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~ 153 (265)
. ..+.... .....++||+.++++.+ +.+++|+||+.....+..++.+++..+|+.++++++....
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---- 148 (226)
T PRK13222 74 EKLRELFDRHYAENV-AGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNK---- 148 (226)
T ss_pred HHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCC----
Confidence 2 2222111 13567899999999887 4789999999999999999999999999999988876653
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCc
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 227 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~ 227 (265)
||++++++.++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++
T Consensus 149 -------------------kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~ 209 (226)
T PRK13222 149 -------------------KPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDV 209 (226)
T ss_pred -------------------CcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCE
Confidence 9999999999999999999999999999999999999999999987653 346889
Q ss_pred eecCHhHHHHHHHHH
Q 024578 228 ALNSIHNIKEAIPEI 242 (265)
Q Consensus 228 ~v~~~~el~~~l~~~ 242 (265)
++.++.+|..++.+-
T Consensus 210 ~i~~~~~l~~~l~~~ 224 (226)
T PRK13222 210 VIDHFAELLPLLGLA 224 (226)
T ss_pred EECCHHHHHHHHHHh
Confidence 999999999987653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-26 Score=195.43 Aligned_cols=202 Identities=15% Similarity=0.205 Sum_probs=148.2
Q ss_pred CccEEEEecCCCccCCcccHHH-HHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHc-CCCCCh---HHH-
Q 024578 11 NYECLLFDLDDTLYPLSTGFNL-ACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-GYEFDN---DEF- 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~---~~~- 83 (265)
..++||||+||||+|+...+.. ++.+ +.+.+|.+...... .....|...... ... ...... +.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~-----l~~e~G~~~~~~e~----~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~ 200 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLT-----LAQEEGKSPPPAFI----LRRVEGMKNEQAISEVLCWSRDPAELRRMA 200 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHH-----HHHHcCCCCCHHHH----HHHhcCCCHHHHHHHHhhccCCHHHHHHHH
Confidence 5799999999999998775554 4443 55667775433211 122334433322 111 111111 112
Q ss_pred ---HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 84 ---HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 84 ---~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
.+.+.+.. .....++||+.++|+.| +++++|+||.....++..++.+|+..+|+.++++++....
T Consensus 201 ~~~~~~y~~~~-~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~-------- 271 (381)
T PLN02575 201 TRKEEIYQALQ-GGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRG-------- 271 (381)
T ss_pred HHHHHHHHHHh-ccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCC--------
Confidence 22222211 13467899999999888 5899999999999999999999999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhH
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHN 234 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~e 234 (265)
||+|++|..+++++|++|++|++|||+..|+.+|+++|+.++++.++.. ...++++++++.|
T Consensus 272 ---------------KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s~~E 336 (381)
T PLN02575 272 ---------------KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRRLDE 336 (381)
T ss_pred ---------------CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECCHHH
Confidence 9999999999999999999999999999999999999999999987543 3358899999999
Q ss_pred H-HHHHHHHhcC
Q 024578 235 I-KEAIPEIWEG 245 (265)
Q Consensus 235 l-~~~l~~~~~~ 245 (265)
| ...++.++..
T Consensus 337 L~~~~l~~l~~~ 348 (381)
T PLN02575 337 LSIVDLKNLADI 348 (381)
T ss_pred HHHHHHhhhhhc
Confidence 8 4445555443
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=188.99 Aligned_cols=198 Identities=16% Similarity=0.208 Sum_probs=147.2
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCCC-ChHHHHHHHh
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYEF-DNDEFHAFVH 88 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~ 88 (265)
++|+++||+||||+||.+.+..++.+ +.+.+|.+....... ....+.... .+...+... ..+.+...+.
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~~~~~~~~----~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 131 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANA-----HAPDFGYDPIDERDY----AQLRQWSSRTIVRRAGLSPWQQARLLQRVQ 131 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHHhCccHHHHHHHcCCCHHHHHHHHHHHH
Confidence 58999999999999988887777765 567777753322211 111222222 122223211 1112222111
Q ss_pred ccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 89 GKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 89 ~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
+.+ ....++++||+.++|+.| +++++|+||+....+...++.+|+..+|+.+++++..
T Consensus 132 ~~~~~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~----------------- 194 (273)
T PRK13225 132 RQLGDCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPI----------------- 194 (273)
T ss_pred HHHHhhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCC-----------------
Confidence 110 134678899999999988 4899999999999999999999999999998776543
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKE 237 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~~ 237 (265)
+++++.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.+|.+
T Consensus 195 ---------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~ 265 (273)
T PRK13225 195 ---------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQ 265 (273)
T ss_pred ---------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHH
Confidence 4557899999999999999999999999999999999999999988754 3479999999999999
Q ss_pred HHHHHh
Q 024578 238 AIPEIW 243 (265)
Q Consensus 238 ~l~~~~ 243 (265)
++.+++
T Consensus 266 ~~~~~~ 271 (273)
T PRK13225 266 AVTQLM 271 (273)
T ss_pred HHHHHh
Confidence 888775
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-25 Score=183.23 Aligned_cols=199 Identities=25% Similarity=0.268 Sum_probs=144.1
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHH--HH---HHHHHHHh--c-ccHH---------HHHHc
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RM---CLELYREH--G-TTMA---------GLKAV 74 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~--~-~~~~---------~~~~~ 74 (265)
+|+|+||+||||+|+...+..++.+ +.+.+|++..... .. ...++..+ + .... .....
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRL-----LFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEY 75 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHH-----HHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHh
Confidence 5899999999999988877766655 4455665432211 10 01111111 1 0000 12223
Q ss_pred CCCCChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
+.....+.+...+.+.. ....+++||+.++|+.++ .+++|+||+....+...++.+++..+||.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~--- 151 (224)
T TIGR02254 76 NTEADEALLNQKYLRFL-EEGHQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQ--- 151 (224)
T ss_pred CCCCcHHHHHHHHHHHH-hccCeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCC---
Confidence 33222222333332221 134678999999998884 789999999999999999999999999999999988765
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc-CCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----CCCCC
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPAD 226 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l-g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~~~a~ 226 (265)
||++.+++.+++++ |++|+++++|||+. +|+.+|+++|++++++.++.. ...++
T Consensus 152 --------------------KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~ 211 (224)
T TIGR02254 152 --------------------KPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPT 211 (224)
T ss_pred --------------------CCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCc
Confidence 99999999999999 99999999999998 799999999999999987532 34678
Q ss_pred ceecCHhHHHHHH
Q 024578 227 HALNSIHNIKEAI 239 (265)
Q Consensus 227 ~~v~~~~el~~~l 239 (265)
+++.++.||.++|
T Consensus 212 ~~~~~~~el~~~~ 224 (224)
T TIGR02254 212 YEIRSLEELYEIL 224 (224)
T ss_pred eEECCHHHHHhhC
Confidence 8999999998754
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=184.60 Aligned_cols=123 Identities=19% Similarity=0.241 Sum_probs=108.8
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
...++||+.++|+.| +.+++|+||+....++..++.+|+..+||.++++++.+..
T Consensus 93 ~~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~----------------------- 149 (224)
T PRK09449 93 ICTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVA----------------------- 149 (224)
T ss_pred cCccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCC-----------------------
Confidence 467899999999988 4889999999999999999999999999999999988775
Q ss_pred CCCHHHHHHHHHHcCCC-CCcEEEEcCCh-hcHHHHHHcCceEEEECCC-CC---CCCCCceecCHhHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVD-PKKTIFFDDSA-RNIASAKAAGLHTVIVGSS-VP---VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~-~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~-~~---~~~a~~~v~~~~el~~~l~ 240 (265)
||++++|..+++++|+. +++|++|||+. +|+.+|+++|+.++++.++ .. ...+++++.++.+|.+++.
T Consensus 150 KP~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 150 KPDVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred CCCHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 99999999999999985 58999999998 6999999999999999743 22 3458899999999988764
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.9e-26 Score=191.08 Aligned_cols=201 Identities=20% Similarity=0.251 Sum_probs=148.6
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHc-C-----CCCC---
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAV-G-----YEFD--- 79 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~-----~~~~--- 79 (265)
.++|+|+||+||||+|+...+..++.. +.+.+|.+....... ....+.....+ ... . ...+
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 81 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDR-----MLLELGRPPAGLEAV----RHWVGNGAPVLVRRALAGSIDHDGVDDEL 81 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhChhHHHHHHHHhcccccccCCCHHH
Confidence 468999999999999988887777765 667777764332221 11222221111 110 0 0111
Q ss_pred hHHHHHHHhcccc--CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 80 NDEFHAFVHGKLP--YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 80 ~~~~~~~~~~~~~--~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
.+.+.+.+.+.+. .....++||+.++|+.+ +.+++|+||.+...++..++.+++..+|+.++++++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~----- 156 (272)
T PRK13223 82 AEQALALFMEAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQK----- 156 (272)
T ss_pred HHHHHHHHHHHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCC-----
Confidence 1222222222111 13457899999999887 4789999999999999999999999999999998877654
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCce
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHA 228 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~ 228 (265)
||++++++.+++++|++|++|++|||+.+|+.+|+++|+.++++.+|.. ...++++
T Consensus 157 ------------------Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~v 218 (272)
T PRK13223 157 ------------------KPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALV 218 (272)
T ss_pred ------------------CCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEE
Confidence 9999999999999999999999999999999999999999999988643 3479999
Q ss_pred ecCHhHHHHHHHHH
Q 024578 229 LNSIHNIKEAIPEI 242 (265)
Q Consensus 229 v~~~~el~~~l~~~ 242 (265)
++++.+|.+++...
T Consensus 219 i~~l~el~~~~~~~ 232 (272)
T PRK13223 219 IDDLRALLPGCADP 232 (272)
T ss_pred ECCHHHHHHHHhcc
Confidence 99999998765543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-25 Score=195.74 Aligned_cols=196 Identities=19% Similarity=0.246 Sum_probs=148.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 83 (265)
...+|+|+||+||||+|+...+..++.. +++.+|.+..... .....|.... .+...+.....+++
T Consensus 8 ~~~ik~VIFDlDGTLvDt~~~~~~a~~~-----~~~~~G~~~~~~~-----~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 77 (382)
T PLN02940 8 KKLVSHVILDLDGTLLNTDGIVSDVLKA-----FLVKYGKQWDGRE-----AQKIVGKTPLEAAATVVEDYGLPCSTDEF 77 (382)
T ss_pred cccCCEEEECCcCcCCcCHHHHHHHHHH-----HHHHcCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 3458999999999999988777777765 5566776543211 1222232211 22333444444443
Q ss_pred HHHHhccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHh-HhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 84 HAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 84 ~~~~~~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~-~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
...+.+.+ ......++||+.++|+.| +.+++|+||.....+...++ .+++..+|+.++++++....
T Consensus 78 ~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~-------- 149 (382)
T PLN02940 78 NSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKG-------- 149 (382)
T ss_pred HHHHHHHHHHHHccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCC--------
Confidence 33222211 124578899999999888 48899999999999988887 78999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHh
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIH 233 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~ 233 (265)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.++.
T Consensus 150 ---------------KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~ 214 (382)
T PLN02940 150 ---------------KPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLL 214 (382)
T ss_pred ---------------CCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHh
Confidence 9999999999999999999999999999999999999999999987642 456889999999
Q ss_pred HHHH
Q 024578 234 NIKE 237 (265)
Q Consensus 234 el~~ 237 (265)
++..
T Consensus 215 el~~ 218 (382)
T PLN02940 215 DLQP 218 (382)
T ss_pred HcCH
Confidence 9764
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.9e-25 Score=177.26 Aligned_cols=174 Identities=19% Similarity=0.327 Sum_probs=128.2
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFH 84 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 84 (265)
.++|+|+||+||||+||...+..++.+ +.+.+|.+... .. .....|.... .....+.....+.+.
T Consensus 3 ~~~~~viFD~DGTLiDs~~~~~~a~~~-----~~~~~g~~~~~-~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (188)
T PRK10725 3 DRYAGLIFDMDGTILDTEPTHRKAWRE-----VLGRYGLQFDE-QA----MVALNGSPTWRIAQAIIELNQADLDPHALA 72 (188)
T ss_pred CcceEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-HH----HHHhcCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 458999999999999988877777765 45556665322 11 1112222211 112223333333333
Q ss_pred HHHh---ccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 85 AFVH---GKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 85 ~~~~---~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
.... .........++|+ .++|+.++ .+++|+||+....++..++++++..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~---------- 141 (188)
T PRK10725 73 REKTEAVKSMLLDSVEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHH---------- 141 (188)
T ss_pred HHHHHHHHHHHhccCCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCC----------
Confidence 2211 1111245677886 57888774 789999999999999999999999999999999988764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.
T Consensus 142 -------------KP~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 142 -------------KPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred -------------CCChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 999999999999999999999999999999999999999999875
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=177.35 Aligned_cols=124 Identities=26% Similarity=0.374 Sum_probs=112.9
Q ss_pred CCCCChhHHHHHhcCCCc--EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSMPQR--KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~~~--~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.++++|++.+.|+.++.+ ++|+||+....+...++.+|+.++||.++++++.+..
T Consensus 97 ~~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~----------------------- 153 (229)
T COG1011 97 LLPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVA----------------------- 153 (229)
T ss_pred hCccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccC-----------------------
Confidence 478999999999999755 9999999999999999999999999999999999875
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCCC-----CCCCceecCHhHHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV-----PPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~~-----~~a~~~v~~~~el~~~l~~ 241 (265)
||.+++|+.+++++|++|++++||||+. ||+.+|+++||+++|+..+... ..+++.+.++.++.+.+..
T Consensus 154 KP~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 154 KPDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred CCCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 9999999999999999999999999999 6889999999999999876532 4688899999999988764
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-25 Score=178.50 Aligned_cols=196 Identities=26% Similarity=0.314 Sum_probs=143.9
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcc----cHHHHHH-cCCC--CChHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT----TMAGLKA-VGYE--FDNDEF 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~--~~~~~~ 83 (265)
++|++||||||||+||...+.++|.+ +.+.+|+....... ....|. ....+.. .+.. ......
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLE-----ALKEYGIEISDEEI-----RELHGGGIARIIDLLRKLAAGEDPADLAEL 70 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHHCCChHHHHHHHHHHhcCCcccCHHHH
Confidence 47899999999999998888888876 67778876544221 111221 1111111 1111 122222
Q ss_pred HHHHhc--cccCCCCCCChhHHHHHhcCC---CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 84 HAFVHG--KLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 84 ~~~~~~--~~~~~~~~~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
.....+ ....+...+.||+.++|+.|+ .+++++|+.....++..++.+|+.++|+.++++++....
T Consensus 71 ~~~~~~~~~~~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~--------- 141 (221)
T COG0637 71 ERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARG--------- 141 (221)
T ss_pred HHHHHHHHHhhhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcC---------
Confidence 222221 122356889999999999995 889999999999999999999999999999999988774
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--------CCCCCceec
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VPPADHALN 230 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~ 230 (265)
||+|++|..+++++|++|++|+.|+|+.+.+.+++++||.++++.++.. ...++....
T Consensus 142 --------------KP~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~~~~~~~~~~~~~~~~~~ 207 (221)
T COG0637 142 --------------KPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAGHDRPHLDPLDAHGADTVLL 207 (221)
T ss_pred --------------CCCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecCCCCccccchhhhhhcchhhc
Confidence 9999999999999999999999999999999999999999999987433 223444555
Q ss_pred CHhHHHHHH
Q 024578 231 SIHNIKEAI 239 (265)
Q Consensus 231 ~~~el~~~l 239 (265)
++.++...+
T Consensus 208 ~~~~l~~~~ 216 (221)
T COG0637 208 DLAELPALL 216 (221)
T ss_pred cHHHHHHHH
Confidence 555554433
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-24 Score=176.64 Aligned_cols=201 Identities=15% Similarity=0.164 Sum_probs=136.2
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCCh---hhHHHHHHHHHHH--------h---ccc-HHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE---SEVPRMCLELYRE--------H---GTT-MAGLKA 73 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------~---~~~-~~~~~~ 73 (265)
+.++|+|+||+||||+|+.+.+..++.+.+...-........ .........+... . +.. ...+..
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD 86 (238)
T ss_pred CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence 446899999999999998887777776644332111111111 1111111100000 0 000 112233
Q ss_pred cCCCCChH-----HHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCC
Q 024578 74 VGYEFDND-----EFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETI 146 (265)
Q Consensus 74 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~ 146 (265)
.|...... .....+.. ....+.++||+.++|+.|+ .+++|+||++.. ++.+|+..+|+.++++++.
T Consensus 87 ~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~ 159 (238)
T PRK10748 87 AGLSAEEASAGADAAMINFAK--WRSRIDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH 159 (238)
T ss_pred cCCCHHHHHHHHHHHHHHHHH--HhhcCCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcHHhhceeEecccC
Confidence 44432211 11111211 1134688999999999984 789999998765 4778999999999999888
Q ss_pred CCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----
Q 024578 147 NPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP---- 221 (265)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~---- 221 (265)
+.. ||++++|..+++++|++|++|++|||+. .|+.+|+++|+.++++..+..
T Consensus 160 ~~~-----------------------KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~ 216 (238)
T PRK10748 160 GRS-----------------------KPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQ 216 (238)
T ss_pred CcC-----------------------CCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccc
Confidence 764 9999999999999999999999999995 999999999999999976432
Q ss_pred ----CCCCCceecCHhHHHHHH
Q 024578 222 ----VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 222 ----~~~a~~~v~~~~el~~~l 239 (265)
...++..+.++.||.++|
T Consensus 217 ~~~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 217 TWDSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred cccccCCCCEEECCHHHHHhhC
Confidence 135888999999998764
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-24 Score=193.89 Aligned_cols=203 Identities=14% Similarity=0.216 Sum_probs=144.4
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHh-CCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCC---hHH-
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD---NDE- 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~- 82 (265)
.+|+++|+||+||||+|+...+..++.+.+.++.... .+... ... .+....|...... ....-... .+.
T Consensus 238 ~~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~-~~~----~~~~~~G~~~~~~~~~l~~~~~~~~~~~~ 312 (459)
T PRK06698 238 NEMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVT-PID----KYREIMGVPLPKVWEALLPDHSLEIREQT 312 (459)
T ss_pred HHhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCC-CHH----HHHHHcCCChHHHHHHHhhhcchhHHHHH
Confidence 4568999999999999999999998888665532111 11111 111 1122233322211 11110000 112
Q ss_pred ---HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 83 ---FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 83 ---~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
+.+.+.+.+.....+++||+.++|+.+ +++++|+||+....+...++.+++..+|+.++++++...
T Consensus 313 ~~~~~~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~-------- 384 (459)
T PRK06698 313 DAYFLERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINS-------- 384 (459)
T ss_pred HHHHHHHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCC--------
Confidence 222222222123568899999999887 489999999999999999999999999999999987642
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCH
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSI 232 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~ 232 (265)
||||+.+..++++++ |++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++
T Consensus 385 ----------------~~kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l 446 (459)
T PRK06698 385 ----------------LNKSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDL 446 (459)
T ss_pred ----------------CCCcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCH
Confidence 677889999998874 68999999999999999999999999987643 34689999999
Q ss_pred hHHHHHHHHH
Q 024578 233 HNIKEAIPEI 242 (265)
Q Consensus 233 ~el~~~l~~~ 242 (265)
.++.+++..+
T Consensus 447 ~el~~~l~~~ 456 (459)
T PRK06698 447 LELKGILSTV 456 (459)
T ss_pred HHHHHHHHHH
Confidence 9999887654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-24 Score=171.68 Aligned_cols=104 Identities=21% Similarity=0.375 Sum_probs=96.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..+.++||+.++|+.+ +++++|+||++...+...++++|+..+|+.++++++++..
T Consensus 89 ~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~--------------------- 147 (198)
T TIGR01428 89 LRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAY--------------------- 147 (198)
T ss_pred hcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCC---------------------
Confidence 4567899999999888 4889999999999999999999999999999999988875
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
||++++|+.+++++|++|+++++|||+.+|+.+|+++|+.++++.++.
T Consensus 148 --KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 148 --KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred --CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999999999998754
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6e-24 Score=169.14 Aligned_cols=170 Identities=22% Similarity=0.334 Sum_probs=122.5
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHH-
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA- 85 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 85 (265)
+|+|+||+||||+|+...+..++.+ +.+.+|.+... ... ....|.... .+...+...+.+.+..
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~--~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKH-----LADKYGIEFDK--QYN---TSLGGLSREDILRAILKLRKPGLSLETIHQL 70 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHH-----HHHHcCCCCCH--HHH---HHcCCCCHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 5799999999999988766666665 45566665321 111 111222211 1122222233332221
Q ss_pred ------HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 86 ------FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 86 ------~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.+.+........++||+.++|+.+ +.+++++|++ ..++..++.+++..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~------- 141 (185)
T TIGR02009 71 AERKNELYRELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEG------- 141 (185)
T ss_pred HHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCC-------
Confidence 221111123478999999999887 5889999998 6678899999999999999999877664
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
||++++++.++++++++|+++++|||+.+|+.+|+++|+.++++
T Consensus 142 ----------------kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 142 ----------------KPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred ----------------CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 99999999999999999999999999999999999999998875
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=177.35 Aligned_cols=196 Identities=19% Similarity=0.284 Sum_probs=133.0
Q ss_pred CccEEEEecCCCccCCc-ccHHHHHHHHHHHHHHHhCCCCh-h-hHHHHHHHHHHHhcccHHH----HHHcCCC------
Q 024578 11 NYECLLFDLDDTLYPLS-TGFNLACRRNIEEFMSQHLHIDE-S-EVPRMCLELYREHGTTMAG----LKAVGYE------ 77 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~-~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~~~------ 77 (265)
.+++|+||+||||+|+. ..+..++.+ +++.+|++. . .... ...+.. .+..... +...+..
T Consensus 39 ~~k~VIFDlDGTLvDS~~~~~~~a~~~-----~l~~~G~~~~~~~~~~-~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 111 (286)
T PLN02779 39 LPEALLFDCDGVLVETERDGHRVAFND-----AFKEFGLRPVEWDVEL-YDELLN-IGGGKERMTWYFNENGWPTSTIEK 111 (286)
T ss_pred CCcEEEEeCceeEEccccHHHHHHHHH-----HHHHcCCCCCCCCHHH-HHHHHc-cCCChHHHHHHHHHcCCCcccccc
Confidence 47999999999999988 666777776 556667732 1 1111 111111 2211111 1111111
Q ss_pred --CCh---H----HHH----HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc---cc
Q 024578 78 --FDN---D----EFH----AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC---FE 138 (265)
Q Consensus 78 --~~~---~----~~~----~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~---fd 138 (265)
... + .+. ..+.+......+.++||+.++|+.+ +++++|+||.....+...++.++...+ |+
T Consensus 112 ~~~~~e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~ 191 (286)
T PLN02779 112 APKDEEERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLD 191 (286)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceE
Confidence 011 1 111 1121111112358899999999877 589999999999999988887743333 34
Q ss_pred eeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 139 GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
.+ ++++.+.. ||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++.+
T Consensus 192 ~v-~~~~~~~~-----------------------KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 247 (286)
T PLN02779 192 VF-AGDDVPKK-----------------------KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKS 247 (286)
T ss_pred EE-eccccCCC-----------------------CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEcc
Confidence 44 66666553 9999999999999999999999999999999999999999999987
Q ss_pred CCC----CCCCCceecCHhHHHH
Q 024578 219 SVP----VPPADHALNSIHNIKE 237 (265)
Q Consensus 219 ~~~----~~~a~~~v~~~~el~~ 237 (265)
+.. ...++++++++.++..
T Consensus 248 g~~~~~~l~~ad~vi~~~~~l~~ 270 (286)
T PLN02779 248 SYTADEDFSGADAVFDCLGDVPL 270 (286)
T ss_pred CCccccccCCCcEEECChhhcch
Confidence 643 2468999999998764
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.9e-24 Score=167.85 Aligned_cols=169 Identities=26% Similarity=0.314 Sum_probs=121.7
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHHHHcCCCCChHHHHH---
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGLKAVGYEFDNDEFHA--- 85 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--- 85 (265)
+|+||+||||+|+...+..++.+ +.+.+|++.... . ... ..+... ..+...+...+.+.+.+
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~-~-~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKA-----LADELGIPFDEE-F-NES---LKGVSREDSLERILDLGGKKYSEEEKEELAE 70 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHH-H-HHH---hcCCChHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 58999999999988877777765 556667653321 1 111 112111 11223344333332221
Q ss_pred ----HHhcccc-CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 86 ----FVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 86 ----~~~~~~~-~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
.+.+.+. .....++||+.++|+.+ +++++|+||+.. ....++.+++..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~-------- 140 (185)
T TIGR01990 71 RKNDYYVELLKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKG-------- 140 (185)
T ss_pred HHHHHHHHHHHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCC--------
Confidence 1221111 12357899999999888 488999998643 46789999999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
||+|+.|+.++++++++|++|++|||+.+|+.+|+++|+.+++++
T Consensus 141 ---------------kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 141 ---------------KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred ---------------CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 999999999999999999999999999999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-23 Score=165.76 Aligned_cols=173 Identities=19% Similarity=0.271 Sum_probs=121.9
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHH--HHHHHHHHH-------h----cccH---------HH
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RMCLELYRE-------H----GTTM---------AG 70 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-------~----~~~~---------~~ 70 (265)
|+|+||+||||+|+...+..++.+ +.+.+|++..... ......+.. + |... ..
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCE-----IARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDT 75 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHH
Confidence 589999999999988888888876 5566777543211 111111110 1 2221 11
Q ss_pred HHHcCCCCChHHHH---HHHhccc-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeec
Q 024578 71 LKAVGYEFDNDEFH---AFVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF 143 (265)
Q Consensus 71 ~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~ 143 (265)
+...+. .....+. ..+.+.+ ......++||+.++|+.+ +.+++|+||+... ....++.+++..+|+.++++
T Consensus 76 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 76 FGRAGV-PDPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred HHhcCC-CCchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEee
Confidence 122221 1111222 2111111 113457899999999887 4789999998765 47789999999999999999
Q ss_pred CCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEE
Q 024578 144 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI 215 (265)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~ 215 (265)
++.+.. ||+++++..+++++|++|+++++|||+. +|+.+|+++|+.+++
T Consensus 154 ~~~~~~-----------------------KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 154 YEVGAE-----------------------KPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred cccCCC-----------------------CCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 988774 9999999999999999999999999998 899999999999875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=165.05 Aligned_cols=168 Identities=29% Similarity=0.462 Sum_probs=122.4
Q ss_pred EEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHHHHhc
Q 024578 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHAFVHG 89 (265)
Q Consensus 15 iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 89 (265)
|+||+||||+++...+...+.+ .+.+.++.+.. ... +....+.... .+...+.. ...+.+.+.+
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~----~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 69 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQR----LALEEFGLEIS-AEE----LRELFGKSYEEALERLLERFGID--PEEIQELFRE 69 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHH----HHHHHTTHHHH-HHH----HHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred cEEECCCCcEeCHHHHHHHHHH----HHHHHhCCCCC-HHH----HHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhh
Confidence 7999999999966644444443 34555555421 111 1111111111 11111111 2233333333
Q ss_pred cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 90 KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 90 ~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
.......+++||+.++|+.+ +.+++++||++...+...++.+|+..+|+.++++++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~----------------- 132 (176)
T PF13419_consen 70 YNLESKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSR----------------- 132 (176)
T ss_dssp HHHHGGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSS-----------------
T ss_pred hhhhhccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhh-----------------
Confidence 22225678999999999888 4999999999999999999999999999999999988875
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
||+++.|+.+++++|++|+++++|||+..|+.+|+++|+.++++
T Consensus 133 ------Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 133 ------KPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp ------TTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEEE
T ss_pred ------hhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEeC
Confidence 99999999999999999999999999999999999999999986
|
... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-23 Score=163.93 Aligned_cols=183 Identities=15% Similarity=0.169 Sum_probs=122.7
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChH---HHHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDND---EFHAFV 87 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 87 (265)
|+|+|+||+||||+|+...+ . .+.+.+|++.... ............. ...+ .+.. ++.+.+
T Consensus 1 m~k~viFDlDGTLiD~~~~~----~-----~~~~~~g~~~~~~---~~~~g~~~~~~~~--~~~~--~~~~~~~~~~~~~ 64 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQSGL----P-----YFAQKYNIPTDHI---LKMIQDERFRDPG--ELFG--CDQELAKKLIEKY 64 (197)
T ss_pred CCcEEEEecCCceEchhhcc----H-----HHHHhcCCCHHHH---HHHHhHhhhcCHH--HHhc--ccHHHHHHHhhhh
Confidence 47999999999999954332 2 2456677754221 1111111111111 1111 1111 122222
Q ss_pred hccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCcc----ccceeeecCCCCCCCCCCCCCCCccc
Q 024578 88 HGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED----CFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~----~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
.+........++||+.++|+.|+ .+++++||.........++.+++.. +|+.+++++.
T Consensus 65 ~~~~~~~~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~---------------- 128 (197)
T PHA02597 65 NNSDFIRYLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGH---------------- 128 (197)
T ss_pred hHHHHHHhccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEecc----------------
Confidence 21112245678999999999984 5678889887776666777776654 4566666654
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc--CceEEEECCCCC--CCCCCceecCHhHHHH
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVP--VPPADHALNSIHNIKE 237 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a--G~~~i~~~~~~~--~~~a~~~v~~~~el~~ 237 (265)
.|||++.+..+++++| |++++||||+.+|+.+|+++ |+.++++.++.. .+.+++++.++.|+..
T Consensus 129 ----------~~~kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 129 ----------DESKEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGERDHIPKLAHRVKSWNDIEN 196 (197)
T ss_pred ----------CcccHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhhccccchhhhhccHHHHhc
Confidence 2778999999999999 89999999999999999999 999999988864 3467789999998864
|
2 hypothetical protein; Provisional |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-22 Score=160.32 Aligned_cols=102 Identities=22% Similarity=0.268 Sum_probs=87.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhH--HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKH--AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~--~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++||+.++|+.| +++++|+||+.... ....+...++..+||.++++++.+..
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~-------------------- 151 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLR-------------------- 151 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCC--------------------
Confidence 467899999999887 48899999986543 33344456777899999999887764
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||+|.+|..+++++|++|++|++|||+..|+.+|+++|+.++++.++
T Consensus 152 ---KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~ 198 (211)
T TIGR02247 152 ---KPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSDE 198 (211)
T ss_pred ---CCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999999999998764
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=7e-22 Score=192.23 Aligned_cols=195 Identities=19% Similarity=0.247 Sum_probs=145.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-----HHcCC-CCChHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-----KAVGY-EFDNDE 82 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~ 82 (265)
.+.+|+|+|||||||+|+...+..++.+ +.+++|++..... +....+.....+ ...+. ....+.
T Consensus 72 ~~~ikaVIFDlDGTLiDS~~~~~~a~~~-----~~~~~G~~it~e~-----~~~~~G~~~~~~~~~~~~~~~l~~~~~~~ 141 (1057)
T PLN02919 72 WGKVSAVLFDMDGVLCNSEEPSRRAAVD-----VFAEMGVEVTVED-----FVPFMGTGEANFLGGVASVKGVKGFDPDA 141 (1057)
T ss_pred CCCCCEEEECCCCCeEeChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHhCCCHHHHHHHHHHhcCCCCCCHHH
Confidence 4568999999999999988777777765 5566777543211 122223322211 11122 122222
Q ss_pred ----HHHHHhcccc-CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc-cccceeeecCCCCCCCCCC
Q 024578 83 ----FHAFVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPA 153 (265)
Q Consensus 83 ----~~~~~~~~~~-~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~-~~fd~i~~~~~~~~~~~~~ 153 (265)
+.+.+.+.+. .....++||+.++|+.| +++++|+||.....++..++++++. .+|+.++++++....
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~---- 217 (1057)
T PLN02919 142 AKKRFFEIYLEKYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENL---- 217 (1057)
T ss_pred HHHHHHHHHHHHhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccC----
Confidence 2222222211 11234799999999888 4899999999999999999999996 789999999988764
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCce
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHA 228 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~ 228 (265)
||+|++|..+++++|++|++|++|||+..|+.+|+++||+++++.++.. ..+++++
T Consensus 218 -------------------KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~v 278 (1057)
T PLN02919 218 -------------------KPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLI 278 (1057)
T ss_pred -------------------CCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEE
Confidence 9999999999999999999999999999999999999999999988754 4678999
Q ss_pred ecCHhHHH
Q 024578 229 LNSIHNIK 236 (265)
Q Consensus 229 v~~~~el~ 236 (265)
+.++.++.
T Consensus 279 i~~l~el~ 286 (1057)
T PLN02919 279 RKDIGNIS 286 (1057)
T ss_pred ECChHHCC
Confidence 99999974
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.4e-22 Score=160.74 Aligned_cols=198 Identities=16% Similarity=0.209 Sum_probs=123.7
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 83 (265)
++++|+++||+||||+++. .+.+ +.+.+|.+.... ......... ..... .+..+ .....+.+
T Consensus 11 ~~~~k~iiFD~DGTL~~~~-----~~~~-----l~~~~g~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~-~~~~~~~~ 77 (219)
T TIGR00338 11 LRSKKLVVFDMDSTLINAE-----TIDE-----IAKIAGVEEEVS-EITERAMRG-ELDFKASLRERVALL-KGLPVELL 77 (219)
T ss_pred hccCCEEEEeCcccCCCch-----HHHH-----HHHHhCCHHHHH-HHHHHHHcC-CCCHHHHHHHHHHHh-CCCCHHHH
Confidence 5678999999999999953 1221 344555532211 111111110 00111 11111 12223333
Q ss_pred HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 84 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
.... ....++||+.++++.+ +.+++|+||+....+..+++.+++..+|+..+..++.. +.+
T Consensus 78 ~~~~------~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~--------~~~-- 141 (219)
T TIGR00338 78 KEVR------ENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGK--------LTG-- 141 (219)
T ss_pred HHHH------hcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCE--------EEE--
Confidence 3333 3467899999998887 58899999999999999999999888776543322100 000
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceec--CHhHHHHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKEA 238 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~--~~~el~~~ 238 (265)
........++||+..++.++++++++|++|++|||+.+|+.+|+.+|+.+++.+...-...|++++. ++.+++.+
T Consensus 142 ---~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 142 ---LVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ---EecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCHHHHHhchhccCCCCHHHHHhh
Confidence 0000011247899999999999999999999999999999999999998654332222457888877 44555543
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-21 Score=155.33 Aligned_cols=121 Identities=17% Similarity=0.314 Sum_probs=98.5
Q ss_pred HcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCC
Q 024578 73 AVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINP 148 (265)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~ 148 (265)
..+...+.+.+...+.+.+ ..++||+.++|+.+ +.+++|+||++.......+.. .++..+|+.++++++++.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~----~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~ 139 (199)
T PRK09456 64 EMALSLSYEQFAHGWQAVF----VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGM 139 (199)
T ss_pred HhCCCCCHHHHHHHHHHHH----hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCC
Confidence 3444444455554443321 35789999999888 489999999988877665554 367788999999999887
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
. ||+|++|+.+++++|++|++|++|||+..|+.+|+++|+.++++.++.
T Consensus 140 ~-----------------------KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~ 188 (199)
T PRK09456 140 R-----------------------KPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQ 188 (199)
T ss_pred C-----------------------CCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCc
Confidence 5 999999999999999999999999999999999999999999998753
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=160.77 Aligned_cols=97 Identities=34% Similarity=0.556 Sum_probs=88.2
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.+++||+.++|+.+ +.+++|+||+.... ...+.++|+..+|+.++++++.+..
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~----------------------- 139 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRG----------------------- 139 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCC-----------------------
Confidence 68899999999887 57899999999888 6666669999999999999887764
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
||+++.|+.+++++|++|++|++|||+..|+.+|+++|+.++++
T Consensus 140 KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 140 KPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999999999999999999875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-21 Score=154.65 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=111.7
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCCh--hhHHHHHHHHHH-Hhc-----------ccHHHHHHcCCCCC
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE--SEVPRMCLELYR-EHG-----------TTMAGLKAVGYEFD 79 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~-----------~~~~~~~~~~~~~~ 79 (265)
+|+||+||||+|+...+..++.. +....+... .........+.. ..+ .........+....
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 75 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAA-----IAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAE 75 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHH-----hhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCC
Confidence 58999999999988777666654 222222110 000000111111 111 01112234455444
Q ss_pred hHHHHHHHhccccCCCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
.+... .+.+. +..+.++||+.++|+ +++|+||++...+...++++++..+|+.++++++.+..
T Consensus 76 ~~~~~-~~~~~--~~~~~~~~g~~~~L~----~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~---------- 138 (175)
T TIGR01493 76 PKYGE-RLRDA--YKNLPPWPDSAAALA----RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAY---------- 138 (175)
T ss_pred HHHHH-HHHHH--HhcCCCCCchHHHHH----HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCC----------
Confidence 43222 22111 145679999999999 47899999999999999999999999999999987764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++
T Consensus 139 -------------KP~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 139 -------------KPDPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred -------------CCCHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-20 Score=152.14 Aligned_cols=88 Identities=25% Similarity=0.326 Sum_probs=77.7
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 174 (265)
+.++..++|+.+ +++++|+||++...++..++.+|+..+|+.++++++... ||
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~------------------------KP 162 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPP------------------------KP 162 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCC------------------------Cc
Confidence 344446666655 689999999999999999999999999999999887653 99
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 175 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
+|+.+..+++++|++|++|++|||+.+|+.+|+++
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 99999999999999999999999999999999864
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=149.15 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=124.2
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHH-cC-CCCChHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKA-VG-YEFDNDEFHA 85 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~~~~~~~~ 85 (265)
.+++|+|+|||||||+++.. +. .+.+.+|.+...... ...+.. ...... .+.. ++ .....+.+..
T Consensus 9 ~~~~k~viFDfDGTL~~~~~-----~~-----~~~~~~g~~~~~~~~-~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 76 (224)
T PLN02954 9 WRSADAVCFDVDSTVCVDEG-----ID-----ELAEFCGAGEAVAEW-TAKAMG-GSVPFEEALAARLSLFKPSLSQVEE 76 (224)
T ss_pred HccCCEEEEeCCCcccchHH-----HH-----HHHHHcCChHHHHHH-HHHHHC-CCCCHHHHHHHHHHHcCCCHHHHHH
Confidence 35689999999999999522 21 256667664222111 111111 001111 1111 11 1122334444
Q ss_pred HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc--cccceeeecCCCCCCCCCCCCCCCcc
Q 024578 86 FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~--~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
.+.+ ....++||+.++++.+ +.+++|+|++....++..++.+|+. .+|+..+..+.-+. .
T Consensus 77 ~~~~----~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~-----------~ 141 (224)
T PLN02954 77 FLEK----RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE-----------Y 141 (224)
T ss_pred HHHH----ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc-----------E
Confidence 4432 1346889999998877 5889999999999999999999986 34543222111000 0
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCHhHH
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNI 235 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~~el 235 (265)
.+.......+.+++|++.++.++++++. +++++|||+.+|+.+++++|+.++...++.. ...++++++++.+|
T Consensus 142 ~g~~~~~~~~~~~~K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el 219 (224)
T PLN02954 142 AGFDENEPTSRSGGKAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDL 219 (224)
T ss_pred ECccCCCcccCCccHHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHH
Confidence 0000111112357889999999999885 6899999999999999998887665433221 34589999999999
Q ss_pred HHHH
Q 024578 236 KEAI 239 (265)
Q Consensus 236 ~~~l 239 (265)
.+++
T Consensus 220 ~~~~ 223 (224)
T PLN02954 220 IEVL 223 (224)
T ss_pred HHhh
Confidence 8754
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-20 Score=152.87 Aligned_cols=184 Identities=18% Similarity=0.198 Sum_probs=129.3
Q ss_pred cCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH----H-HHHcCCC--CChHHHHHHH---h
Q 024578 19 LDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA----G-LKAVGYE--FDNDEFHAFV---H 88 (265)
Q Consensus 19 lDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~--~~~~~~~~~~---~ 88 (265)
+||||+||...+..++.+ +.+.+|++... . ......|.... . ....+.. ...+.+.... .
T Consensus 1 ~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~-~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEK-----ILARYGKTFDW-S----LKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAML 70 (220)
T ss_pred CCCcceecHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 799999988877777775 55667765321 1 11222343321 1 1222332 1222222211 1
Q ss_pred ccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHH-HHhHhCCccccceeeecC--CCCCCCCCCCCCCCcccC
Q 024578 89 GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAME-VLGRLGLEDCFEGIICFE--TINPRLQPADNTDGIENN 162 (265)
Q Consensus 89 ~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~-~l~~~~~~~~fd~i~~~~--~~~~~~~~~~~~~~~~~~ 162 (265)
... .....++||+.++|+.| +++++|+||........ .++..++..+|+.+++++ +.+.
T Consensus 71 ~~~-~~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~-------------- 135 (220)
T PLN02811 71 QDL-FPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQ-------------- 135 (220)
T ss_pred HHH-HhhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccC--------------
Confidence 111 23567899999999887 58999999998765443 444456778999999998 6665
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC---CCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 235 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg---~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el 235 (265)
+||+|++|..++++++ ++|++|++|||+..|+.+|+++|+.++++.++.. ...+++++.++.++
T Consensus 136 ---------~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~ 206 (220)
T PLN02811 136 ---------GKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDF 206 (220)
T ss_pred ---------CCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhC
Confidence 4999999999999997 9999999999999999999999999999987642 33678888888875
Q ss_pred H
Q 024578 236 K 236 (265)
Q Consensus 236 ~ 236 (265)
.
T Consensus 207 ~ 207 (220)
T PLN02811 207 K 207 (220)
T ss_pred C
Confidence 4
|
|
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.9e-20 Score=141.87 Aligned_cols=151 Identities=21% Similarity=0.231 Sum_probs=108.9
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhccccC
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY 93 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (265)
+|+||+||||+|+...+..++.+. .+.++..... +....|.....+.... ...+++.. + .
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~-----~~~~~~~~~~-------~~~~~g~~~~~~~~~~--~~~~~~~~-----~-~ 60 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEET-----LEEFGEDFQA-------LKALRGLAEELLYRIA--TSFEELLG-----Y-D 60 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHH-----HHHhcccHHH-------HHHHHccChHHHHHHH--HHHHHHhC-----c-c
Confidence 489999999999877777777763 3444432211 1111222211111110 01111111 1 1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.....+||+.++|+.+ +.+++|+||+....+...++.+ +..+|+.++++++.+ .
T Consensus 61 ~~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~-~--------------------- 117 (154)
T TIGR01549 61 AEEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFG-A--------------------- 117 (154)
T ss_pred hhheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCC-C---------------------
Confidence 3445678999999887 4889999999999999999987 778899999988766 4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 210 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG 210 (265)
||+++.+..+++++|++| +|++|||+..|+.+|+++|
T Consensus 118 --Kp~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 118 --KPEPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --CcCHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 999999999999999999 9999999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=146.71 Aligned_cols=120 Identities=22% Similarity=0.245 Sum_probs=96.5
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeeecCC-----CCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFET-----INPRLQP 152 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~~~~-----~~~~~~~ 152 (265)
+.++||+.++|+.| +++++|+||... ..+...++.+++ .|+.++.+.. .+.
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~~~~~~---- 101 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPEDGCDC---- 101 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCCCCCcC----
Confidence 46889999999888 589999999863 234445666666 3777775432 233
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCC--
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPA-- 225 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a-- 225 (265)
+||+++++..+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...+
T Consensus 102 -------------------~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~ 162 (181)
T PRK08942 102 -------------------RKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPG 162 (181)
T ss_pred -------------------CCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCC
Confidence 49999999999999999999999999999999999999999999987643 2345
Q ss_pred CceecCHhHHHHHHH
Q 024578 226 DHALNSIHNIKEAIP 240 (265)
Q Consensus 226 ~~~v~~~~el~~~l~ 240 (265)
++++.++.++.+++.
T Consensus 163 ~~ii~~l~el~~~l~ 177 (181)
T PRK08942 163 TWVLDSLADLPQALK 177 (181)
T ss_pred ceeecCHHHHHHHHH
Confidence 899999999988764
|
|
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.8e-20 Score=147.49 Aligned_cols=185 Identities=16% Similarity=0.267 Sum_probs=126.6
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhh--HHHHHHHHHHH-------hcc-----cHHH---
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESE--VPRMCLELYRE-------HGT-----TMAG--- 70 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~-----~~~~--- 70 (265)
..+.+|+|+||++|||+...+.....+.+ +.+.+|++... ........+.. ++. ....
T Consensus 3 ~~~~iravtfD~~~tLl~~~~~~~~~y~~-----i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~ 77 (237)
T KOG3085|consen 3 ELMRIRAVTFDAGGTLLATLPPVMEVYCE-----IAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWP 77 (237)
T ss_pred cccceEEEEEeCCCceeecCCccHHHHHH-----HHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHH
Confidence 45679999999999999866666665554 67788887332 11111111110 010 0000
Q ss_pred --H-HHc---CCCCChHHHHHHHhccccC---CCCCCChhHHHHHhcCC---CcEEEEeCCChhHHHHHHhHhCCccccc
Q 024578 71 --L-KAV---GYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRLGLEDCFE 138 (265)
Q Consensus 71 --~-~~~---~~~~~~~~~~~~~~~~~~~---~~~~~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~~l~~~~~~~~fd 138 (265)
+ ..+ +.+........+..+.+.. ......+++.++++.++ ..++++||.+...- ..+..+++..+||
T Consensus 78 ~lv~~~f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~~~fD 156 (237)
T KOG3085|consen 78 KLVESTFGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLSAYFD 156 (237)
T ss_pred HHHHHHhccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHHHhhh
Confidence 0 011 1111111111111111111 24566778889988884 56778888876654 8888999999999
Q ss_pred eeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEEC
Q 024578 139 GIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVG 217 (265)
Q Consensus 139 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~ 217 (265)
.++.|.+.+.. ||+|.+|+.+++++++.|++|++|||+. ||+++|+++||+++.+.
T Consensus 157 ~vv~S~e~g~~-----------------------KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~ 213 (237)
T KOG3085|consen 157 FVVESCEVGLE-----------------------KPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD 213 (237)
T ss_pred hhhhhhhhccC-----------------------CCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc
Confidence 99999999986 9999999999999999999999999999 89999999999999998
Q ss_pred CCCC
Q 024578 218 SSVP 221 (265)
Q Consensus 218 ~~~~ 221 (265)
++..
T Consensus 214 ~~~~ 217 (237)
T KOG3085|consen 214 NSIT 217 (237)
T ss_pred cccc
Confidence 7654
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=145.52 Aligned_cols=112 Identities=14% Similarity=0.136 Sum_probs=88.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc--
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ-- 168 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 168 (265)
....++||+.++|+.+ +.+++|+|++....++.+++.+|+..+|+..+..++.+.. .+..
T Consensus 77 ~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~---------------~p~~~~ 141 (201)
T TIGR01491 77 KEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI---------------QPDGIV 141 (201)
T ss_pred HhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE---------------ecceee
Confidence 3467899999999887 5899999999999999999999988878776665543321 0000
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
....++|++.++.+++++|++++++++|||+.+|+.+++.+|+.++..+.+.
T Consensus 142 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 142 RVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred EEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 0012456688999999999999999999999999999999999877766543
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.5e-19 Score=142.18 Aligned_cols=121 Identities=16% Similarity=0.138 Sum_probs=94.4
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChh--------HHHHHHhHhCCccccceee-ecCCCCCCCCCCCCCCCcccCc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQK--------HAMEVLGRLGLEDCFEGII-CFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~--------~~~~~l~~~~~~~~fd~i~-~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
+.++||+.++|+.| +++++|+||.... .....++.+|+..+|.... ++++...
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~--------------- 91 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKHGDGCEC--------------- 91 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCCCCCCCC---------------
Confidence 45789999999888 5899999998642 2333466666554433222 2333344
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------------CCCCCceecC
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------------VPPADHALNS 231 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------------~~~a~~~v~~ 231 (265)
.||+++++.+++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ...+++++.+
T Consensus 92 --------~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~ 163 (173)
T PRK06769 92 --------RKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAEN 163 (173)
T ss_pred --------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhC
Confidence 49999999999999999999999999999999999999999999987642 2458899999
Q ss_pred HhHHHHHH
Q 024578 232 IHNIKEAI 239 (265)
Q Consensus 232 ~~el~~~l 239 (265)
+.|+.+.|
T Consensus 164 ~~el~~~l 171 (173)
T PRK06769 164 FEDAVNWI 171 (173)
T ss_pred HHHHHHHH
Confidence 99998865
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.9e-19 Score=150.98 Aligned_cols=130 Identities=15% Similarity=0.117 Sum_probs=93.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++||+.++++.+ +.+++|+|++.....+.+++++++...+...+...+- .+ .+... ...+
T Consensus 178 ~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg--------~l----tg~v~-g~iv 244 (322)
T PRK11133 178 ENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDG--------KL----TGNVL-GDIV 244 (322)
T ss_pred HhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECC--------EE----EeEec-CccC
Confidence 3467899999988777 5899999999999899999998876544321111000 00 00000 0112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKE 237 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~ 237 (265)
.+|||++.++.+++++|+++++|++|||+.||+.|++.+|+.+++.+.+.-+..|+++++ ..+|..
T Consensus 245 ~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~nAkp~Vk~~Ad~~i~-~~~l~~ 310 (322)
T PRK11133 245 DAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAYHAKPKVNEQAQVTIR-HADLMG 310 (322)
T ss_pred CcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEeCCCHHHHhhCCEEec-CcCHHH
Confidence 358999999999999999999999999999999999999998887333333678888886 334433
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=141.40 Aligned_cols=128 Identities=17% Similarity=0.155 Sum_probs=95.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.+.++||+.++|+.| +++++|+||.+. ......++.+++. |+.++.+.....
T Consensus 24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~-------- 93 (176)
T TIGR00213 24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPE-------- 93 (176)
T ss_pred HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCc--------
Confidence 356889999998888 589999999884 2334556666655 777665432211
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCC-----CCCCCceec
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALN 230 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~-----~~~a~~~v~ 230 (265)
.....+.....+||++++|..+++++|++|++|+||||+.+|+.+|+++|+.+ +++.++.. ...++++++
T Consensus 94 ----~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~ 169 (176)
T TIGR00213 94 ----GVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN 169 (176)
T ss_pred ----ccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec
Confidence 00001111223599999999999999999999999999999999999999998 78887753 246899999
Q ss_pred CHhHHH
Q 024578 231 SIHNIK 236 (265)
Q Consensus 231 ~~~el~ 236 (265)
++.+|.
T Consensus 170 ~~~el~ 175 (176)
T TIGR00213 170 SLADLP 175 (176)
T ss_pred cHHHhh
Confidence 999885
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.3e-19 Score=142.15 Aligned_cols=195 Identities=13% Similarity=0.089 Sum_probs=122.8
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHH-HHHHHHHhcccHHHHHHcCCCCChHHHHHHHhcc
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRM-CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 90 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (265)
+|+|+||+||||++ . .+. .+.+.+|.+....... ...+....+.....+... ..+.+.+....
T Consensus 1 ~~~v~FD~DGTL~~--~----~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~i~~~~--- 64 (205)
T PRK13582 1 MEIVCLDLEGVLVP--E----IWI-----AFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEH--GLGLADIQEVI--- 64 (205)
T ss_pred CeEEEEeCCCCChh--h----HHH-----HHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHc--CCCHHHHHHHH---
Confidence 47999999999983 1 222 1456666643210000 000111122222222222 23455555544
Q ss_pred ccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 91 LPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 91 ~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
...+++||+.++++.++ .+++|+|++....++..++++++..+|+..+..++-+.. ..
T Consensus 65 ---~~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i---------------~~-- 124 (205)
T PRK13582 65 ---ATLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMI---------------TG-- 124 (205)
T ss_pred ---HhCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeE---------------EC--
Confidence 45678999999998884 789999999999999999999998888765544321100 00
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCc-eecCHhHHHHHHHHHhcC
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH-ALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~-~v~~~~el~~~l~~~~~~ 245 (265)
..++++.....++++++..++++++||||.+|+.+++++|+... +..++. ...+++ +++++.+|.+++.+..++
T Consensus 125 --~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 201 (205)
T PRK13582 125 --YDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGIL-FRPPANVIAEFPQFPAVHTYDELLAAIDKASAR 201 (205)
T ss_pred --ccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEE-ECCCHHHHHhCCcccccCCHHHHHHHHHHHHhh
Confidence 00222333455566666677999999999999999999998654 443322 224454 899999999998887643
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.3e-19 Score=134.71 Aligned_cols=101 Identities=22% Similarity=0.278 Sum_probs=79.1
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccc--cceee-ecCCCCCCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDC--FEGII-CFETINPRLQPAD 154 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~--fd~i~-~~~~~~~~~~~~~ 154 (265)
++++||+.++|+.| +++++|+||.+. ..+...++++++... |..+. +++..+.
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~------ 99 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSC------ 99 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCC------
Confidence 35788888888877 589999999873 456667788887521 11111 1233333
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
.||++++++.++++++++|++|++|||+..|+++|+++|+.+++++.|
T Consensus 100 -----------------~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 100 -----------------RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred -----------------CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 399999999999999999999999999999999999999999999764
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-18 Score=141.43 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=91.2
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeec------CCCCCCCCCCCCCCCcccCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF------ETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~------~~~~~~~~~~~~~~~~~~~~~ 164 (265)
.+..++||+.++++.+ +.+++|+|++....++.+++.+ +.. +.++++ +.+..
T Consensus 71 ~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~---------------- 131 (219)
T PRK09552 71 ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITI---------------- 131 (219)
T ss_pred hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEE----------------
Confidence 4467899999999877 5899999999999999999998 643 334332 22111
Q ss_pred CcCcccCCCCCHHH----------HHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC--C--CCCCCCCceec
Q 024578 165 SSNQRILCKPSLEA----------IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS--S--VPVPPADHALN 230 (265)
Q Consensus 165 ~~~~~~~~kp~~~~----------~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~--~--~~~~~a~~~v~ 230 (265)
.||.+.. ...++++++.++++|++||||.+|+.+|+++|+.++ -.. . .....+.+.+.
T Consensus 132 -------~kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a-~~~l~~~~~~~~~~~~~~~ 203 (219)
T PRK09552 132 -------TWPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA-RDFLITKCEELGIPYTPFE 203 (219)
T ss_pred -------eccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee-HHHHHHHHHHcCCCccccC
Confidence 2443322 236788899999999999999999999999999433 110 0 12445777899
Q ss_pred CHhHHHHHHHHHhc
Q 024578 231 SIHNIKEAIPEIWE 244 (265)
Q Consensus 231 ~~~el~~~l~~~~~ 244 (265)
++.|+.+.|+++++
T Consensus 204 ~f~ei~~~l~~~~~ 217 (219)
T PRK09552 204 TFHDVQTELKHLLE 217 (219)
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999988764
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.1e-17 Score=134.65 Aligned_cols=194 Identities=19% Similarity=0.190 Sum_probs=143.8
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HH----HHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GL----KAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~ 83 (265)
...+.+++||+||||+|+...+...+.. ++.++|........ ....|.... .. .......+.+++
T Consensus 7 ~~~~~~~lfD~dG~lvdte~~y~~~~~~-----~~~~ygk~~~~~~~-----~~~mG~~~~eaa~~~~~~~~dp~s~ee~ 76 (222)
T KOG2914|consen 7 SLKVSACLFDMDGTLVDTEDLYTEAWQE-----LLDRYGKPYPWDVK-----VKSMGKRTSEAARLFVKKLPDPVSREEF 76 (222)
T ss_pred ccceeeEEEecCCcEEecHHHHHHHHHH-----HHHHcCCCChHHHH-----HHHcCCCHHHHHHHHHhhcCCCCCHHHH
Confidence 4457899999999999988777777765 77778774433221 122233221 11 233456677777
Q ss_pred HHHHhccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhC-Cccccceeee--cCCCCCCCCCCCC
Q 024578 84 HAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLG-LEDCFEGIIC--FETINPRLQPADN 155 (265)
Q Consensus 84 ~~~~~~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~-~~~~fd~i~~--~~~~~~~~~~~~~ 155 (265)
.....+.. ......+.||+.++++.| ++++.++|+.+.......+++++ +-..|+.++. ++++..
T Consensus 77 ~~e~~~~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~------- 149 (222)
T KOG2914|consen 77 NKEEEEILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN------- 149 (222)
T ss_pred HHHHHHHHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC-------
Confidence 65554422 235678899999999888 48999999999998888888887 5566888777 344544
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceec
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALN 230 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~ 230 (265)
+||+|++|..+++.+|.+| +.|++++|++..+++|+++||.+++++...- ...++.++.
T Consensus 150 ----------------gKP~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~ 213 (222)
T KOG2914|consen 150 ----------------GKPDPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILE 213 (222)
T ss_pred ----------------CCCCchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecc
Confidence 5999999999999999998 9999999999999999999999999987332 455666666
Q ss_pred CHhHH
Q 024578 231 SIHNI 235 (265)
Q Consensus 231 ~~~el 235 (265)
++.+.
T Consensus 214 ~~~~~ 218 (222)
T KOG2914|consen 214 SLEDF 218 (222)
T ss_pred ccccc
Confidence 65543
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.2e-17 Score=131.82 Aligned_cols=103 Identities=17% Similarity=0.212 Sum_probs=87.9
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...+++||+.++|+.+ |++++|+||++...++..+++. ++..+|+.++.. ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~-~~g-------------------- 150 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT-TVG-------------------- 150 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe-Ccc--------------------
Confidence 3567899999999988 5889999999999888888875 566677776632 222
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
.||+++.|..+++++|++|++++||||+..|+.+|+++|+.++++.++.+
T Consensus 151 ----~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g~ 200 (220)
T TIGR01691 151 ----LKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPGN 200 (220)
T ss_pred ----cCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCCC
Confidence 39999999999999999999999999999999999999999999977653
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.5e-18 Score=132.38 Aligned_cols=101 Identities=16% Similarity=0.323 Sum_probs=86.4
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeeec-----CCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICF-----ETINPRLQ 151 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~~-----~~~~~~~~ 151 (265)
.++++||+.++|+.| +++++|+||.+ ...+...++.+|+. |+.++.+ ++...
T Consensus 27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~~~~--- 101 (161)
T TIGR01261 27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDNCDC--- 101 (161)
T ss_pred HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCCCCC---
Confidence 357889999999888 48999999963 45677889999986 8766543 44444
Q ss_pred CCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 152 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.||++.++..++++++++|++++||||+.+|+.+|+++|+.++++.+++
T Consensus 102 --------------------~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~~ 150 (161)
T TIGR01261 102 --------------------RKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEEE 150 (161)
T ss_pred --------------------CCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChhh
Confidence 3999999999999999999999999999999999999999999998875
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-17 Score=132.39 Aligned_cols=192 Identities=11% Similarity=0.063 Sum_probs=117.3
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhcccc
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP 92 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (265)
++++||+||||++. .|. .+....|+............+..+......+... ...+.+.+.+.+
T Consensus 2 ~la~FDlD~TLi~~------~w~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~-~g~~~~~i~~~~----- 64 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWI-----AFAEKTGIDALKATTRDIPDYDVLMKQRLRILDE-HGLKLGDIQEVI----- 64 (203)
T ss_pred eEEEEeCCcccHHH------HHH-----HHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHH-CCCCHHHHHHHH-----
Confidence 57999999999973 122 2455666533221111111122222211222221 144455665555
Q ss_pred CCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 93 YEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 93 ~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++||+.++++.++ .+++|+|++....+..+++.+|+..+|......++.+.. .+...
T Consensus 65 -~~i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~-----------tG~~~----- 127 (203)
T TIGR02137 65 -ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-----------VGYQL----- 127 (203)
T ss_pred -HhCCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee-----------ECeee-----
Confidence 34678999999998773 689999999999999999999988777642222110000 00000
Q ss_pred CCCC-CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCC-ceecCHhHHHHHHHHH
Q 024578 171 LCKP-SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPAD-HALNSIHNIKEAIPEI 242 (265)
Q Consensus 171 ~~kp-~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~-~~v~~~~el~~~l~~~ 242 (265)
..++ |...++.+ ++.+. ++++||||.||+.+++.+|...++.+.+.. ...++ -++.++.||.+.+.+.
T Consensus 128 ~~~~~K~~~l~~l-~~~~~---~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 RQKDPKRQSVIAF-KSLYY---RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred cCcchHHHHHHHH-HhhCC---CEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 1133 44444444 56553 799999999999999999998777765543 22333 3778888888877654
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.6e-18 Score=134.00 Aligned_cols=104 Identities=17% Similarity=0.247 Sum_probs=90.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC-ChhHHHHHHhHhCCc---------cccceeeecCCCCCCCCCCCCCCCcc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLGLE---------DCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~-~~~~~~~~l~~~~~~---------~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
....++||+.++|+.| +.+++|+||. ....++..++.+++. .+|+.+++++....+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~----------- 110 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKA----------- 110 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchH-----------
Confidence 4567899999999888 4889999998 888889999999998 999999998865433
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHc--CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIA--NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~l--g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
||.+.+++.+.+.+ |++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 111 ------------kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 111 ------------KQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred ------------HHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 67777887777777 8999999999999999999999999999998874
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.74 E-value=2.8e-17 Score=123.62 Aligned_cols=94 Identities=21% Similarity=0.355 Sum_probs=79.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCC--------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNAD--------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFS 165 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~--------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (265)
.++|++.++|+.| +++++|+||+. ...+...++++++. ++.++.+. ..
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~~--~~----------------- 83 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYACP--HC----------------- 83 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEECC--CC-----------------
Confidence 5678888888776 58999999998 78888999999886 44444333 23
Q ss_pred cCcccCCCCCHHHHHHHHHHc-CCCCCcEEEEcC-ChhcHHHHHHcCceEEEEC
Q 024578 166 SNQRILCKPSLEAIETAIRIA-NVDPKKTIFFDD-SARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~l-g~~~~~~i~vGD-~~~Di~~a~~aG~~~i~~~ 217 (265)
.||+++.++.+++++ +++|++++|||| +.+|+.+|+.+|+.+++++
T Consensus 84 ------~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 84 ------RKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred ------CCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 499999999999999 599999999999 6899999999999999985
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.9e-17 Score=132.17 Aligned_cols=98 Identities=17% Similarity=0.144 Sum_probs=80.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC----ChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA----DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~----~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
....+.+++.++|+.+ |.+++++||. ....++.+++.+|+..+|+.+++++....+
T Consensus 111 ~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~----------------- 173 (237)
T TIGR01672 111 EFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQY----------------- 173 (237)
T ss_pred cCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCC-----------------
Confidence 3446677799998887 5889999998 666888899999999999998888766543
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||.+. .+++++++ ++||||+.+|+.+|+++|+.++.+.++..
T Consensus 174 ------Kp~~~---~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~~g~~ 215 (237)
T TIGR01672 174 ------QYTKT---QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRILRASN 215 (237)
T ss_pred ------CCCHH---HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEEecCC
Confidence 67654 35667776 79999999999999999999999987754
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.6e-16 Score=122.96 Aligned_cols=122 Identities=13% Similarity=0.097 Sum_probs=86.4
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
...+.+...+ ...+++||+.++++.+ +.+++|+|++....++..++.+++..+|+.+++++..... .+
T Consensus 59 ~~~~~~~~~~------~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~---~g 129 (188)
T TIGR01489 59 LKEDEILEVL------KSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN---DG 129 (188)
T ss_pred CCHHHHHHHH------HhCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC---CC
Confidence 3344555554 3367889999998877 5889999999999999999999999999999987653221 01
Q ss_pred CCCCcc-cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 155 NTDGIE-NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 155 ~~~~~~-~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
...+.. .+..+ .....+.+|++.++++.++. +++++||||+.+|+.+|+++++-
T Consensus 130 ~~~~~~~~~~~~-~~~~~g~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 130 RHIVWPHHCHGC-CSCPCGCCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred cEEEecCCCCcc-CcCCCCCCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCcc
Confidence 111100 00000 11233456788998888765 79999999999999999999753
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.5e-16 Score=127.31 Aligned_cols=183 Identities=14% Similarity=0.106 Sum_probs=121.0
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHH--hcccHHHHHHcCCCCChHHHHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE--HGTTMAGLKAVGYEFDNDEFHAFV 87 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 87 (265)
++.++++|||||||++ ...+. .+....|....-........... +..............+.+.+.+..
T Consensus 3 ~~~~L~vFD~D~TLi~-----~~~~~-----~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~l~g~~~~~v~~~~ 72 (212)
T COG0560 3 RMKKLAVFDLDGTLIN-----AELID-----ELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLKGLPVEVLEEVR 72 (212)
T ss_pred CccceEEEecccchhh-----HHHHH-----HHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4678999999999998 22221 24455555332211111111111 111111112223344455555555
Q ss_pred hccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 88 HGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
.+. .++.||+.++++.+ |.+++|+|++....++++.+.+|++..+...+..++ +. -++.
T Consensus 73 ~~~-----~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G~------------ltG~ 134 (212)
T COG0560 73 EEF-----LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-GK------------LTGR 134 (212)
T ss_pred Hhc-----CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-CE------------Eece
Confidence 321 67889999988776 699999999999999999999999888777666554 21 1122
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.-...+.++.|...++++++++|+++++++++|||.||+.|.+.+|...+..+.+.
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~ 190 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK 190 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH
Confidence 22233445788999999999999999999999999999999999998766655543
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.6e-17 Score=134.35 Aligned_cols=121 Identities=14% Similarity=0.203 Sum_probs=91.3
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
++++.+.++.+ +.+++++||.+.......+..++...+|+.+.++..... ...+||+
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~~~~~--------------------~~~gKP~ 181 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYATDTKA--------------------TVVGKPS 181 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHhCCCc--------------------eeecCCC
Confidence 45666655554 356677777776665555555666666666554432211 1236999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHHHHH
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l 239 (265)
+.+++.++++++++|++++||||+. +|+.+|+++|+.++++.+|.. ...++++++++.++.+++
T Consensus 182 p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 182 KTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred HHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999996 899999999999999988741 346899999999998765
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.7e-17 Score=125.63 Aligned_cols=93 Identities=20% Similarity=0.189 Sum_probs=77.0
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChh------------HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQK------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~------------~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++||+.++|+.| +++++|+||++.. .++..++.+|+. ++.+++++....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~--~~~ii~~~~~~~-------------- 106 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP--IQVLAATHAGLY-------------- 106 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC--EEEEEecCCCCC--------------
Confidence 678999998887 5899999998763 467788999985 355665554333
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC--CCCCcEEEEcCCh--------hcHHHHHHcCceEEE
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSA--------RNIASAKAAGLHTVI 215 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg--~~~~~~i~vGD~~--------~Di~~a~~aG~~~i~ 215 (265)
.||++..++.+++++| +++++++||||+. +|+.+|+++|+.+++
T Consensus 107 ---------~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 107 ---------RKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred ---------CCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 3999999999999999 9999999999996 699999999998764
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-16 Score=123.04 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=92.3
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.|+.-+.+++|+||.....+...++.+|+..+|+. .+||++.++.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~--------------------------------~~~k~~~~~~ 83 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG--------------------------------QSNKLIAFSD 83 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec--------------------------------ccchHHHHHH
Confidence 45666677899999999999999999999998766542 1788999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH---HHHHHHHHhcC
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEG 245 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e---l~~~l~~~~~~ 245 (265)
+++++|+++++|+||||+.+|+.+++.+|+. +.+.+... +..+++++.+..+ +.++++++++.
T Consensus 84 ~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~-~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~~~~ 151 (154)
T TIGR01670 84 ILEKLALAPENVAYIGDDLIDWPVMEKVGLS-VAVADAHPLLIPRADYVTRIAGGRGAVREVCELLLLA 151 (154)
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCe-EecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999997 66655433 5668888887754 88888887754
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.2e-16 Score=118.48 Aligned_cols=116 Identities=27% Similarity=0.362 Sum_probs=93.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++|++.++++.+ +.+++|+|++....++..++.+++...++.++++...... ..............
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~~~ 93 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIY-------YPKEGLFLGGGPFD 93 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhh-------cccccccccccccc
Confidence 5568889999998887 4789999999999999999999988788888876644321 01111222334455
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
.+||++..++.++++++.+++++++|||+.+|+.+++.+|+.++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 6699999999999999999999999999999999999999988864
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-16 Score=125.05 Aligned_cols=116 Identities=18% Similarity=0.263 Sum_probs=92.3
Q ss_pred HHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHH
Q 024578 104 NLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 183 (265)
Q Consensus 104 ~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~ 183 (265)
+.++..+++++|+|+.....+...++.+++..+|+. +++++..++.++
T Consensus 58 ~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~g--------------------------------~~~k~~~l~~~~ 105 (183)
T PRK09484 58 RCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQG--------------------------------QSNKLIAFSDLL 105 (183)
T ss_pred HHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCcHHHHHHHHH
Confidence 344556789999999999999999999998766541 277789999999
Q ss_pred HHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec------CHhHHHHHHHHHhcCChhhhhh
Q 024578 184 RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN------SIHNIKEAIPEIWEGEGEQLEQ 252 (265)
Q Consensus 184 ~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~------~~~el~~~l~~~~~~~~~~~~~ 252 (265)
+++|++|++++||||+.+|+.+++++|+.++ +.+... ...+++++. .+.++.+++....+.+.....|
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~-v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~~~~~~~~~ 181 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA-VADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQGKLDEAKGQ 181 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEe-cCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcCChhhhcCC
Confidence 9999999999999999999999999999844 544332 456889886 6788888777666655544433
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-16 Score=123.89 Aligned_cols=96 Identities=15% Similarity=0.133 Sum_probs=82.0
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 182 (265)
...|+..+++++|+|+.....++..++.+++..+|+. .||+|+.++.+
T Consensus 43 ~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~--------------------------------~kpkp~~~~~~ 90 (169)
T TIGR02726 43 VIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG--------------------------------IKKKTEPYAQM 90 (169)
T ss_pred HHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec--------------------------------CCCCHHHHHHH
Confidence 4567777899999999999999999999999877763 28889999999
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceec
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALN 230 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~ 230 (265)
++++++++++|++|||+.||+.+++.+|+..++-+.... +..+++++.
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTT 139 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcC
Confidence 999999999999999999999999999997666654433 566777765
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.3e-15 Score=124.06 Aligned_cols=128 Identities=12% Similarity=0.111 Sum_probs=85.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
...++||+.++++.+ +.+++|+|++....++.+++.++.. +.+++++..-.. +.+ ..
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~---~~i~~n~~~~~~----~~~-------------~~ 127 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK---DRIYCNEADFSN----EYI-------------HI 127 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc---ccEEeceeEeeC----Cee-------------EE
Confidence 467899999998887 5899999999999999999987543 333332211000 000 00
Q ss_pred CCCCHHHH----------HHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-----CCCCCCCceecCHhHHH
Q 024578 172 CKPSLEAI----------ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-----VPVPPADHALNSIHNIK 236 (265)
Q Consensus 172 ~kp~~~~~----------~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-----~~~~~a~~~v~~~~el~ 236 (265)
.+|.+..+ ..++++++..+++++|||||.+|+.+|+.+|+ ++.... .....+...+.++.|+.
T Consensus 128 ~~p~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~--~~ar~~l~~~~~~~~~~~~~~~~f~di~ 205 (214)
T TIGR03333 128 DWPHPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDL--CFARDYLLNECEELGLNHAPFQDFYDVR 205 (214)
T ss_pred eCCCCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCe--eEehHHHHHHHHHcCCCccCcCCHHHHH
Confidence 13322221 24566666688999999999999999999997 333221 12344667789999999
Q ss_pred HHHHHHhc
Q 024578 237 EAIPEIWE 244 (265)
Q Consensus 237 ~~l~~~~~ 244 (265)
+.|++.++
T Consensus 206 ~~l~~~~~ 213 (214)
T TIGR03333 206 KELENVKE 213 (214)
T ss_pred HHHHHHhc
Confidence 98887653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.5e-15 Score=124.09 Aligned_cols=70 Identities=20% Similarity=0.319 Sum_probs=60.4
Q ss_pred cCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC------C--CCCCceecCHhHH
Q 024578 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNI 235 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~------~--~~a~~~v~~~~el 235 (265)
.+....+||++.+++.+++.++++++++++|||+. +|+.+|+++|+.++++.+|.. . ..++++++++.++
T Consensus 171 ~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 171 VKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 34455689999999999999999999999999997 899999999999999988753 1 4688888887763
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.63 E-value=9.4e-15 Score=117.82 Aligned_cols=109 Identities=12% Similarity=0.091 Sum_probs=82.1
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccce-eeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++|++.++++.+ +.+++|+|++....++.+++.+|+..+|.. +...++ +. . .+......+.
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~-g~-----------~-~g~~~~~~~~ 152 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESED-GI-----------Y-TGNIDGNNCK 152 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCC-CE-----------E-eCCccCCCCC
Confidence 46789999998776 589999999999999999999998766554 222121 00 0 0111112234
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
+++|...+++++++.++++++++++|||.+|+.+++.+|..++..+
T Consensus 153 g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCC
Confidence 6888899999999999999999999999999999999997655443
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.6e-15 Score=118.47 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=78.3
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
+.+.+.||+.++++.+ +.+++|+|++....++..++.+|+...|...+..++-+. ..+...+..+.
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~-----------~~g~~~~~~~~ 138 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGL-----------LTGPIEGQVNP 138 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCE-----------EeCccCCcccC
Confidence 3456789999998877 588999999999999999999998766665544331111 00101111223
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
.+..|+..++.++++++++++++++||||.+|+.+++.+
T Consensus 139 ~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 139 EGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 457788999999999999999999999999999999764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-15 Score=131.32 Aligned_cols=72 Identities=17% Similarity=0.185 Sum_probs=64.1
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----------CCCCCceecCHhHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----------VPPADHALNSIHNIKEA 238 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----------~~~a~~~v~~~~el~~~ 238 (265)
.++||++.+++.+++++++++++++||||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|.++
T Consensus 227 ~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~~ 306 (311)
T PLN02645 227 VVGKPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLTL 306 (311)
T ss_pred cCCCChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHHH
Confidence 4579999999999999999999999999998 899999999999999988753 15689999999999886
Q ss_pred HHH
Q 024578 239 IPE 241 (265)
Q Consensus 239 l~~ 241 (265)
++.
T Consensus 307 ~~~ 309 (311)
T PLN02645 307 KAA 309 (311)
T ss_pred hhc
Confidence 653
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-14 Score=125.56 Aligned_cols=113 Identities=17% Similarity=0.302 Sum_probs=88.7
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC---------------ChhHHHHHHhHhCCccccceeeec-----CCCCCCC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRL 150 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~---------------~~~~~~~~l~~~~~~~~fd~i~~~-----~~~~~~~ 150 (265)
.+..++||+.++|+.| +.+++|+||. ....+..+++.+++. |+.++.+ ++...
T Consensus 27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~sd~~~~-- 102 (354)
T PRK05446 27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPEDNCSC-- 102 (354)
T ss_pred ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCcccCCC--
Confidence 4467899999999888 4889999995 234566677788774 7766543 23233
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceec
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 230 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~ 230 (265)
+||++.++..++++++++|++++||||+.+|+.+|+++|+.+++++.. --
T Consensus 103 ---------------------rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~---------~~ 152 (354)
T PRK05446 103 ---------------------RKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE---------TL 152 (354)
T ss_pred ---------------------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC---------CC
Confidence 499999999999999999999999999999999999999999999542 24
Q ss_pred CHhHHHHHHH
Q 024578 231 SIHNIKEAIP 240 (265)
Q Consensus 231 ~~~el~~~l~ 240 (265)
+++++.+.|.
T Consensus 153 ~~~~i~~~l~ 162 (354)
T PRK05446 153 NWDAIAEQLT 162 (354)
T ss_pred CHHHHHHHHh
Confidence 5666666644
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.61 E-value=1e-14 Score=114.32 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=76.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCC-hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~-~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.++|++.++|+.+ +.+++|+||++ ...+...++.+++..++ .. .
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~~-----------------------~ 90 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------HA-----------------------V 90 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------CC-----------------------C
Confidence 4567777777766 58899999998 56666666776654221 11 3
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||+++++..++++++++++++++|||+. .|+.+|+++|+.++++.++..
T Consensus 91 KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~ 140 (170)
T TIGR01668 91 KPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVH 140 (170)
T ss_pred CCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcC
Confidence 9999999999999999999999999998 799999999999999988754
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.8e-15 Score=127.99 Aligned_cols=117 Identities=21% Similarity=0.231 Sum_probs=79.9
Q ss_pred ChhHHHHHhcCC--CcEEEEeCCChhHHH-HHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 99 DPVLRNLLLSMP--QRKIIFTNADQKHAM-EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 99 ~p~~~~~l~~l~--~~~~i~s~~~~~~~~-~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
++++.++++.++ ..++|+||.+..... ..+...+...+|+.+..... ......+||+
T Consensus 145 y~~i~~~l~~L~~~g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g--------------------~~~~~~gKP~ 204 (279)
T TIGR01452 145 YAKLREACAHLREPGCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASG--------------------RQPLVVGKPS 204 (279)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhC--------------------CceeccCCCC
Confidence 566666666663 235677776653321 11223333344444432211 1112347999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------------CCCCCceecCHhHH
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------------VPPADHALNSIHNI 235 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------------~~~a~~~v~~~~el 235 (265)
+.++..+++++|++|++++||||+. .||.+|+++|+.++++.+|.. ...++++++++.+|
T Consensus 205 p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 205 PYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred HHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 9999999999999999999999995 899999999999999988853 13588888887764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.7e-14 Score=116.03 Aligned_cols=109 Identities=17% Similarity=0.203 Sum_probs=82.6
Q ss_pred hHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCC----hhHHHHHHhHhCC--ccccceeeecCCCCCCC
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNAD----QKHAMEVLGRLGL--EDCFEGIICFETINPRL 150 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~----~~~~~~~l~~~~~--~~~fd~i~~~~~~~~~~ 150 (265)
.+.+.+.+.+.. .....|+||+.++|+.+ +.+++++||.. ......+++.+|+ ..+|+.+++++.. .
T Consensus 98 ~~~fw~~y~~~~-~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~- 173 (237)
T PRK11009 98 NQKFWEKMNNGW-DEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--G- 173 (237)
T ss_pred hHHHHHHHHhcc-cccCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC--C-
Confidence 445555555442 24578899999999888 58899999964 4466777777999 7888888877643 1
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||.+.. .++++++ ++||||+.+|+.+|++||+.++.+.++..
T Consensus 174 ----------------------K~~K~~---~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~ 215 (237)
T PRK11009 174 ----------------------QYTKTQ---WLKKKNI----RIFYGDSDNDITAAREAGARGIRILRAAN 215 (237)
T ss_pred ----------------------CCCHHH---HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEecCCC
Confidence 555432 5556666 89999999999999999999999988754
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=111.60 Aligned_cols=132 Identities=16% Similarity=0.183 Sum_probs=93.9
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC-----CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM-----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l-----~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
...+++.+.+ ..+++.||+.++++.+ +..++|+|+++..+++.+|+++|+...|+.|+++...-..
T Consensus 58 vt~~~I~~~l------~~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~--- 128 (234)
T PF06888_consen 58 VTPEDIRDAL------RSIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDA--- 128 (234)
T ss_pred CCHHHHHHHH------HcCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecC---
Confidence 5567777766 5678899999999888 3779999999999999999999999999999998632211
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc---CCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
.|-..+.---.+.+..+...--|...++++++.. |+..++++|||||.||+..+...+-.-+.+++
T Consensus 129 ~G~l~v~pyh~h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 129 DGRLRVRPYHSHGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred CceEEEeCccCCCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence 1111111000011112222235678888888774 77889999999999999999987765444443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-14 Score=118.82 Aligned_cols=219 Identities=17% Similarity=0.184 Sum_probs=131.7
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhh--------HHHHHHHHHHHhcccHHHHHH-cCCCC
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESE--------VPRMCLELYREHGTTMAGLKA-VGYEF 78 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~ 78 (265)
.++.+++++||+||||++....+..+.. .+.. ++..|.+..- .....+. +.. .+.+.
T Consensus 4 ~~~~y~~~l~DlDGvl~~G~~~ipga~e-~l~~--L~~~g~~~iflTNn~~~s~~~~~~~-----------L~~~~~~~~ 69 (269)
T COG0647 4 VMDKYDGFLFDLDGVLYRGNEAIPGAAE-ALKR--LKAAGKPVIFLTNNSTRSREVVAAR-----------LSSLGGVDV 69 (269)
T ss_pred hhhhcCEEEEcCcCceEeCCccCchHHH-HHHH--HHHcCCeEEEEeCCCCCCHHHHHHH-----------HHhhcCCCC
Confidence 3567899999999999997776665443 2332 3444443221 1111111 112 12222
Q ss_pred ChH-------HHHHHHhccccCCCCCC--ChhHHHHHhcCCCc-----------EEEEeCCChhHHHHHHhHh-CCcccc
Q 024578 79 DND-------EFHAFVHGKLPYEKLKP--DPVLRNLLLSMPQR-----------KIIFTNADQKHAMEVLGRL-GLEDCF 137 (265)
Q Consensus 79 ~~~-------~~~~~~~~~~~~~~~~~--~p~~~~~l~~l~~~-----------~~i~s~~~~~~~~~~l~~~-~~~~~f 137 (265)
.++ .-..++.+.....++.. -++..+.++.+++. .+++.-......+.+.+.+ .+..-.
T Consensus 70 ~~~~i~TS~~at~~~l~~~~~~~kv~viG~~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~ 149 (269)
T COG0647 70 TPDDIVTSGDATADYLAKQKPGKKVYVIGEEGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGA 149 (269)
T ss_pred CHHHeecHHHHHHHHHHhhCCCCEEEEECCcchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCC
Confidence 221 22233333222122222 36788888887622 2333332222222222211 112225
Q ss_pred ceeeecCCCCCCCCCCCCCCCcc-------cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHc
Q 024578 138 EGIICFETINPRLQPADNTDGIE-------NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA 209 (265)
Q Consensus 138 d~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~a 209 (265)
..|.++.+...+.+.+-.++-.+ .++..+ ...|||.+.+++.+++.++.+++++++|||++ +||.+|+++
T Consensus 150 ~fI~tNpD~~~p~~~g~~pgaGai~~~~~~~tg~~~--~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~ 227 (269)
T COG0647 150 PFIATNPDLTVPTERGLRPGAGAIAALLEQATGREP--TVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAA 227 (269)
T ss_pred cEEEeCCCccccCCCCCccCcHHHHHHHHHhhCCcc--cccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHc
Confidence 56777777766644443333333 333332 57899999999999999999999999999999 699999999
Q ss_pred CceEEEECCCCC--------CCCCCceecCHhHHHHHHHHH
Q 024578 210 GLHTVIVGSSVP--------VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 210 G~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l~~~ 242 (265)
|+.+++|.+|.. ...+++++.++.++...+..+
T Consensus 228 G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~~~~~ 268 (269)
T COG0647 228 GLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITALKEL 268 (269)
T ss_pred CCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhhhhcc
Confidence 999999988864 467899999999988876653
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=118.63 Aligned_cols=68 Identities=25% Similarity=0.280 Sum_probs=61.5
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
....+||++.+++.+++.+++++++|+||||+. +|+.+|+++|+.++++.+|.. ...++++++++.+|
T Consensus 169 ~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 169 PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred ccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 445689999999999999999999999999997 899999999999999988854 35799999999887
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.8e-15 Score=121.92 Aligned_cols=72 Identities=15% Similarity=0.226 Sum_probs=58.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+.+|+.+++.+++.+|++++++++|||+.||++|++.+|+.+++-+.... +..+++++.+.++ +.+.|++++
T Consensus 155 ~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 155 GVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 57889999999999999999999999999999999999986555443332 5678888876555 777776653
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.56 E-value=2e-14 Score=107.40 Aligned_cols=85 Identities=19% Similarity=0.178 Sum_probs=73.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCC-ChhHHHHHHhHhC-------CccccceeeecCCCCCCCCCCCCCCCcccCcCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLG-------LEDCFEGIICFETINPRLQPADNTDGIENNSFS 165 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~-~~~~~~~~l~~~~-------~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (265)
+++||+.++|+.+ +.+++|+||. ........++.++ +..+|+.++++++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~-------------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYW-------------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCC--------------------
Confidence 4778899988887 5889999999 7888888889888 7788888887752
Q ss_pred cCcccCCCCCHHHHHHHHHHcC--CCCCcEEEEcCChhcHHHHHH
Q 024578 166 SNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKA 208 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~lg--~~~~~~i~vGD~~~Di~~a~~ 208 (265)
+|+++.+..+++++| ++|++|+||||+..|+...+.
T Consensus 89 -------~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 -------LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred -------CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 788999999999999 999999999999999876653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-14 Score=120.41 Aligned_cols=110 Identities=15% Similarity=0.108 Sum_probs=91.0
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
...++|++.++++.+ +.+++++|+.+....+..++++++.. +|+.+++.+.... +-....
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~----------------~~~~~~ 248 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMH----------------FQREQG 248 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhh----------------hcccCC
Confidence 346789999998887 58899999999999999999999886 8999888773110 000000
Q ss_pred CCCCCHHHHHHHHHHcCC-CCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 171 LCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.+||++..+..++++++. ++++|++|||+.+|+.+|+++|+.++++.+|.
T Consensus 249 ~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 249 DKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCCC
Confidence 149999999999999988 67999999999999999999999999998873
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-14 Score=121.15 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+..|+.+++.+++.+|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+.++ +.++|++++
T Consensus 197 ~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 197 GNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 35688999999999999999999999999999999999986544 34332 5678998877665 777776654
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.7e-14 Score=105.02 Aligned_cols=80 Identities=19% Similarity=0.338 Sum_probs=70.5
Q ss_pred hcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc
Q 024578 107 LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 186 (265)
Q Consensus 107 ~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l 186 (265)
+..+.+++|+||+....+....+.+|+. .++.+. ||.+..++++++++
T Consensus 59 k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A~----------------------------KP~~~~fr~Al~~m 106 (175)
T COG2179 59 KEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRAK----------------------------KPFGRAFRRALKEM 106 (175)
T ss_pred HhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeeccc----------------------------CccHHHHHHHHHHc
Confidence 3346889999999999999999999864 444433 99999999999999
Q ss_pred CCCCCcEEEEcCCh-hcHHHHHHcCceEEEECC
Q 024578 187 NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 187 g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~ 218 (265)
++++++|+||||.. +|+.++..+|+++|.|..
T Consensus 107 ~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 107 NLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred CCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 99999999999999 799999999999999954
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.53 E-value=4.5e-15 Score=113.75 Aligned_cols=93 Identities=16% Similarity=0.063 Sum_probs=81.8
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
.+.++||+.++|+.+ +++++|+|++....++..++++++.. +|+.++++++....
T Consensus 43 ~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~---------------------- 100 (148)
T smart00577 43 YVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFV---------------------- 100 (148)
T ss_pred EEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccccc----------------------
Confidence 457789999999998 48899999999999999999999864 56999998887653
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 213 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~ 213 (265)
||+ |.++++++|.+|++|++|||+.+|+.+++++|+..
T Consensus 101 -KP~---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 101 -KGK---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred -CCe---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEe
Confidence 886 88899999999999999999999999999998754
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.3e-14 Score=116.36 Aligned_cols=88 Identities=22% Similarity=0.311 Sum_probs=74.6
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++.|++.++++.| +++++++|+.+...+....+.+|+. +.++.+...
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~---~~~v~a~~~------------------------- 176 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF---DSIVFARVI------------------------- 176 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---SEEEEESHE-------------------------
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---ccccccccc-------------------------
Confidence 346779999998887 5789999999999999999999983 333333311
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG 210 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG 210 (265)
+||.+.++..+++.+++++++|+||||+.||+.++++||
T Consensus 177 ~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 177 GKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp TTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 299999999999999999999999999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-14 Score=117.32 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN 234 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e 234 (265)
+.+|+.+++++++++|++++++++|||+.||+.|++.+|+.+++-+.... +..|++++.+..+
T Consensus 147 ~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 147 GVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYG 210 (225)
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCC
Confidence 57889999999999999999999999999999999999986555443332 6678888765544
|
catalyze the same reaction as SPP. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-12 Score=100.98 Aligned_cols=122 Identities=18% Similarity=0.301 Sum_probs=93.7
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
+.+.|++.+.+..+ +++++++||.+ ...+...|+..|+. ||.++.+......
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~Cph~p~~-------- 99 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYCPHHPED-------- 99 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEECCCCCCC--------
Confidence 45677888877666 69999999942 33455666677764 8888887765431
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCH
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSI 232 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~ 232 (265)
.|..+||++.++..+++++++++...++|||+..|++.|.++|+..+.+.++.. ....++++.++
T Consensus 100 ----------~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (181)
T COG0241 100 ----------NCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSL 169 (181)
T ss_pred ----------CCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccH
Confidence 134469999999999999999999999999999999999999999887765533 22456777777
Q ss_pred hHHHH
Q 024578 233 HNIKE 237 (265)
Q Consensus 233 ~el~~ 237 (265)
.++..
T Consensus 170 ~~~~~ 174 (181)
T COG0241 170 AEFAN 174 (181)
T ss_pred HHHHH
Confidence 77763
|
|
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.7e-13 Score=91.53 Aligned_cols=65 Identities=31% Similarity=0.467 Sum_probs=59.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
++||++.++..++++++++++++++|||+ .+|+.+|+++|+.++++.+|.. ...++++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 47999999999999999999999999999 7999999999999999988754 36899999999885
|
... |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-12 Score=105.55 Aligned_cols=105 Identities=13% Similarity=0.041 Sum_probs=72.0
Q ss_pred CCCChhHHHHHh-cC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~-~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++||+.+.|+ .+ +.+++|+|+.....++..++.+++.. .+.+++++-... -++......|.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~------------~tg~~~g~~c~ 160 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRR------------YGGWVLTLRCL 160 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEE------------EccEECCccCC
Confidence 567999999994 33 57999999999999999999988532 455665542111 11222222334
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
|.-|...+++.+ +.+.+.+.+.|||.+|+.+...+|-. +.|+
T Consensus 161 g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~~-~~vn 202 (211)
T PRK11590 161 GHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQHR-WRVT 202 (211)
T ss_pred ChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHhCCCC-EEEC
Confidence 455554444444 66778899999999999999999954 4443
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.5e-13 Score=101.30 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=93.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.+.++.||+.++...| +.+++++|++....+..+...+|+. +..++.+... ++.++.+.++....++.
T Consensus 85 ~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~--~~n~yAN~l~-------fd~~Gk~~gfd~~~pts 155 (227)
T KOG1615|consen 85 QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP--KSNIYANELL-------FDKDGKYLGFDTNEPTS 155 (227)
T ss_pred CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc--Hhhhhhheee-------eccCCcccccccCCccc
Confidence 4678889999998877 5889999999999999999999987 4445544321 34456666666666666
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 235 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el 235 (265)
-+-.|++.+..+.+ +.+-+.++||||+.+|+++...+. +++..+.+ +..+.+.++++..|
T Consensus 156 dsggKa~~i~~lrk--~~~~~~~~mvGDGatDlea~~pa~---afi~~~g~~~r~~vk~nak~~~~~f~~L 221 (227)
T KOG1615|consen 156 DSGGKAEVIALLRK--NYNYKTIVMVGDGATDLEAMPPAD---AFIGFGGNVIREGVKANAKWYVTDFYVL 221 (227)
T ss_pred cCCccHHHHHHHHh--CCChheeEEecCCccccccCCchh---hhhccCCceEcHhhHhccHHHHHHHHHH
Confidence 67788999988877 778899999999999999887732 33333332 45566656555544
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.5e-12 Score=109.41 Aligned_cols=73 Identities=19% Similarity=0.215 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHhc
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIWE 244 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~~ 244 (265)
+..|..+++.+++++|++++++++|||+.||++|.+.+|.++++-+..+. +..|+++..+.++ +.+.|++++.
T Consensus 187 g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 187 GVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred CCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 67889999999999999999999999999999999999986665555333 5566665554443 7777777653
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-11 Score=106.06 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=60.1
Q ss_pred ccCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC-------CCCCCc
Q 024578 169 RILCKPSLEAIETAIRIA--------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-------VPPADH 227 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~l--------g~-----~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~-------~~~a~~ 227 (265)
..+|||++.+++.+++.+ +. ++++++||||+. +||.+|+++||.+++|.+|.. ...+++
T Consensus 229 ~~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~ 308 (321)
T TIGR01456 229 YTLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTL 308 (321)
T ss_pred EEcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCE
Confidence 577999999999988887 43 457999999999 899999999999999987632 235889
Q ss_pred eecCHhHHHHHH
Q 024578 228 ALNSIHNIKEAI 239 (265)
Q Consensus 228 ~v~~~~el~~~l 239 (265)
+++++.|+...|
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999988765
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.40 E-value=4.1e-12 Score=99.72 Aligned_cols=155 Identities=12% Similarity=0.138 Sum_probs=101.3
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
..+++.+.+ ..++..||+.++++.+ + +.++|+|..+..+++.+|+++++.++|..|++++..... .|
T Consensus 72 ~~~~ik~~~------r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da---~G 142 (256)
T KOG3120|consen 72 RIAEIKQVL------RSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDA---SG 142 (256)
T ss_pred CHHHHHHHH------hcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCC---CC
Confidence 355566555 5678999999998877 3 578999999999999999999999999999987632110 00
Q ss_pred CCCCc-----ccCcCCcCcccCCCCCHHHHHHHHHH---cCCCCCcEEEEcCChhcHHHHHHc-CceEEEECCCCC----
Q 024578 155 NTDGI-----ENNSFSSNQRILCKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAA-GLHTVIVGSSVP---- 221 (265)
Q Consensus 155 ~~~~~-----~~~~~~~~~~~~~kp~~~~~~~~~~~---lg~~~~~~i~vGD~~~Di~~a~~a-G~~~i~~~~~~~---- 221 (265)
---+. +++..|+...| |...+.++... -|+.-++++|||||.||+...... +..+++...++.
T Consensus 143 ~L~v~pyH~~hsC~~CPsNmC----Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~ 218 (256)
T KOG3120|consen 143 RLLVRPYHTQHSCNLCPSNMC----KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKL 218 (256)
T ss_pred cEEeecCCCCCccCcCchhhh----hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhh
Confidence 00000 12223333222 23444444433 378888999999999998776665 445555544554
Q ss_pred ------C-CCCCceecCHhHHHHHHHHHhcCC
Q 024578 222 ------V-PPADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 222 ------~-~~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
. ...-..-++-+|+.++|.+++..+
T Consensus 219 ~~~~p~~~kasV~~W~sg~d~~~~L~~lik~~ 250 (256)
T KOG3120|consen 219 ISANPMLLKASVLEWSSGEDLERILQQLIKTI 250 (256)
T ss_pred hhcCcceeeeeEEecccHHHHHHHHHHHHHHh
Confidence 1 112234567788888888886554
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.7e-13 Score=111.99 Aligned_cols=75 Identities=8% Similarity=0.048 Sum_probs=59.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCc--eecCHhH--HHHHHHHHhcCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADH--ALNSIHN--IKEAIPEIWEGE 246 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~--~v~~~~e--l~~~l~~~~~~~ 246 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+.... +..|++ ++.+.++ +.+.|++++..|
T Consensus 186 g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~~~ 265 (272)
T PRK15126 186 GCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYP 265 (272)
T ss_pred CCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhcCC
Confidence 56889999999999999999999999999999999999986555443332 555665 5655444 888888887543
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.38 E-value=3.8e-13 Score=109.58 Aligned_cols=61 Identities=13% Similarity=0.158 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 232 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~ 232 (265)
+..|..+++.+++.+|++++++++|||+.||++|++.+|+.+++-+.... +..|++++.+.
T Consensus 145 ~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam~na~~~~k~~A~~v~~~~ 206 (215)
T TIGR01487 145 GVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNP 206 (215)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEcCCccHHHHHhCCEEcCCC
Confidence 47889999999999999999999999999999999999987655544332 56678877643
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.2e-12 Score=108.70 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=59.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|+.+++-+.... +..|++++.+.++ +.+.|++++
T Consensus 194 gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 194 RVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 57889999999999999999999999999999999999986555544333 6778998876544 777777664
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.3e-12 Score=108.39 Aligned_cols=72 Identities=13% Similarity=0.132 Sum_probs=57.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCC--ceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPAD--HALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~--~~v~~~~e--l~~~l~~~~ 243 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|+..++-+.... +..|+ +++.+.++ +.+.|++++
T Consensus 188 gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 188 GVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 57889999999999999999999999999999999999987655554433 55555 66666554 777777664
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=103.25 Aligned_cols=73 Identities=19% Similarity=0.186 Sum_probs=57.1
Q ss_pred CCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEEEECCCCC-C----CCC-Ccee--cC--HhHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP-V----PPA-DHAL--NS--IHNIKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~----~~a-~~~v--~~--~~el~~~l~ 240 (265)
+ .|...++++++.+|+++ +++++|||+.||++|++.+|+.+++-+.... + ..+ +.+. .+ -+.+.+.|+
T Consensus 189 ~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 189 G-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred C-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 5 77889999999999999 9999999999999999999987666665544 3 233 4555 33 346888888
Q ss_pred HHhcC
Q 024578 241 EIWEG 245 (265)
Q Consensus 241 ~~~~~ 245 (265)
+++.+
T Consensus 268 ~~~~~ 272 (273)
T PRK00192 268 KLLSK 272 (273)
T ss_pred HHHhh
Confidence 87653
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.9e-11 Score=112.05 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=58.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|+++++-+..+. +..|++|+.+.++ +.+.|+++
T Consensus 505 gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~ 578 (580)
T PLN02887 505 GTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRY 578 (580)
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHh
Confidence 57889999999999999999999999999999999999986555554433 6778998876555 66666654
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.34 E-value=5.3e-12 Score=108.88 Aligned_cols=87 Identities=16% Similarity=0.171 Sum_probs=77.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhH----hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~----~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
++|++.++|+.+ |++++|+|+++...+...++. +++.++|+.+..+.
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~-------------------------- 85 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINW-------------------------- 85 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEec--------------------------
Confidence 477888888777 588999999999999999999 88888898876653
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
|||++.+..+++++|+++++++||||+..|+.++++++..
T Consensus 86 --~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 86 --GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPV 125 (320)
T ss_pred --CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999997754
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.5e-11 Score=97.58 Aligned_cols=121 Identities=16% Similarity=0.131 Sum_probs=84.6
Q ss_pred CCCChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 76 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
...+.+.+.....+ ..+.+.||+.++++.| +.+++|+|++....++.+++.+++.+.+..++++......
T Consensus 104 ~~~~~e~i~~~v~~----~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~--- 176 (277)
T TIGR01544 104 QAFPKAKIKEIVAE----SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDE--- 176 (277)
T ss_pred CCCCHHHHHHHHhh----cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECC---
Confidence 34456677766643 4678999999999887 5899999999999999999999987777777665422110
Q ss_pred CCCCCCcccCcCCcCcccCCCCCH-HHHHHHHHHcC--CCCCcEEEEcCChhcHHHHHHc
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSL-EAIETAIRIAN--VDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~-~~~~~~~~~lg--~~~~~~i~vGD~~~Di~~a~~a 209 (265)
++...+ + +.+.+-.-.|. ..++...+.++ .++++|++||||.+|+.||..+
T Consensus 177 ----dGvltG-~-~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 177 ----DGVLKG-F-KGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ----CCeEeC-C-CCCcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 011111 1 11111112223 56667888898 8999999999999999998666
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.9e-12 Score=96.34 Aligned_cols=97 Identities=21% Similarity=0.293 Sum_probs=78.0
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
....+..++.++.|+|+.....++...+.+|+...|.. - +.|...++.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG----~----------------------------~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQG----I----------------------------SDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeec----h----------------------------HhHHHHHHH
Confidence 35678888999999999999999999999998644333 2 677899999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCceec
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALN 230 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v~ 230 (265)
+++++++.+++|.|+||..+|+.....+|..++..+... -...++++.+
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~ 140 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTS 140 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhh
Confidence 999999999999999999999999999998655443321 1444555444
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.2e-10 Score=104.95 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=75.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++.+|++.+.++.+ |.+++|+|+.+...++..++++|+ ||.++++++...
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~~---------------------- 123 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTTN---------------------- 123 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCccc----------------------
Confidence 3456779999999887 588999999999999999999987 899999886543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+||++.. +.+.+.++ .+++.++||+.+|+.+++.+| +.+.++.+.
T Consensus 124 -~kg~~K~-~~l~~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~ 168 (479)
T PRK08238 124 -LKGAAKA-AALVEAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP 168 (479)
T ss_pred -cCCchHH-HHHHHHhC--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH
Confidence 2554432 23445555 356899999999999999999 677776553
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.5e-11 Score=102.33 Aligned_cols=73 Identities=11% Similarity=0.056 Sum_probs=59.1
Q ss_pred CCCCHHHHHHHHHHcCC---CCCcEEEEcCChhcHHHHHHcCceEEEECCC-C------CCCCCCceecCHh--HHHHHH
Q 024578 172 CKPSLEAIETAIRIANV---DPKKTIFFDDSARNIASAKAAGLHTVIVGSS-V------PVPPADHALNSIH--NIKEAI 239 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~---~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~------~~~~a~~~v~~~~--el~~~l 239 (265)
+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|+.+++-+.. . .+..++++..... .+.+.|
T Consensus 185 g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l 264 (271)
T PRK03669 185 SAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGL 264 (271)
T ss_pred CCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHH
Confidence 57889999999999999 9999999999999999999999876666433 1 1335777776655 688888
Q ss_pred HHHhc
Q 024578 240 PEIWE 244 (265)
Q Consensus 240 ~~~~~ 244 (265)
+.++.
T Consensus 265 ~~~~~ 269 (271)
T PRK03669 265 DHFFS 269 (271)
T ss_pred HHHHh
Confidence 87764
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.2e-11 Score=111.90 Aligned_cols=89 Identities=25% Similarity=0.273 Sum_probs=73.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCCh------------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQ------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~------------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++||+.+.|+.| +++++|+||... ..+..+++.+|+. |+.+++.+....
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~~~~~~-------------- 261 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAIGAGFY-------------- 261 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeCCCCCC--------------
Confidence 578888888887 699999999766 3577888888875 887776654444
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC----CCCCcEEEEcCChhcHHHHHHcCc
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg----~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
+||++.++..++++++ +++++++||||+..|+..++.+|-
T Consensus 262 ---------RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 262 ---------RKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred ---------CCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 4999999999999985 899999999999999988777764
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.5e-11 Score=89.55 Aligned_cols=204 Identities=12% Similarity=0.094 Sum_probs=120.8
Q ss_pred EEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHc--CCCCChHHHHHHHhccc
Q 024578 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV--GYEFDNDEFHAFVHGKL 91 (265)
Q Consensus 14 ~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 91 (265)
.|+.|+|||+.-.. ... ++.+.+|.+... .+...+....-.....+..+ .+..+.++..+.+
T Consensus 5 vi~sDFDGTITl~D--s~~--------~itdtf~~~e~k--~l~~~vls~tiS~rd~~g~mf~~i~~s~~Eile~l---- 68 (220)
T COG4359 5 VIFSDFDGTITLND--SND--------YITDTFGPGEWK--ALKDGVLSKTISFRDGFGRMFGSIHSSLEEILEFL---- 68 (220)
T ss_pred EEEecCCCceEecc--hhH--------HHHhccCchHHH--HHHHHHhhCceeHHHHHHHHHHhcCCCHHHHHHHH----
Confidence 45669999996311 111 256666665433 23333333222222222111 1223346666666
Q ss_pred cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccce--eeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 92 PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 92 ~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~--i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
..++.+.||..++++++ +.+.+|+|++....+..+++.+.-.+..+. +++.+..-. +-+.|.+.+...
T Consensus 69 -lk~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih---~dg~h~i~~~~d--- 141 (220)
T COG4359 69 -LKDIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIH---IDGQHSIKYTDD--- 141 (220)
T ss_pred -HhhcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEc---CCCceeeecCCc---
Confidence 25578899999999888 489999999999999999999864433222 222221111 123444444221
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE---EECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV---IVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i---~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
...+..|| . .++.+.-+++.++|+|||..|+++|+....-++ +++...++.....-+.++.|++..+++++
T Consensus 142 s~fG~dK~--~----vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK~~L~nyc~eqn~~f~~fe~F~eIlk~iekvl 215 (220)
T COG4359 142 SQFGHDKS--S----VIHELSEPNESIFYCGDSVSDLSAAKLSDLLFAKDDLLNYCREQNLNFLEFETFYEILKEIEKVL 215 (220)
T ss_pred cccCCCcc--h----hHHHhhcCCceEEEecCCcccccHhhhhhhHhhHHHHHHHHHHcCCCCcccccHHHHHHHHHHHH
Confidence 22222344 3 445555577889999999999999999875333 22333345556667788888888888877
Q ss_pred cCC
Q 024578 244 EGE 246 (265)
Q Consensus 244 ~~~ 246 (265)
+.+
T Consensus 216 ~~~ 218 (220)
T COG4359 216 EVQ 218 (220)
T ss_pred hhh
Confidence 543
|
|
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.3e-10 Score=87.32 Aligned_cols=197 Identities=18% Similarity=0.215 Sum_probs=120.0
Q ss_pred CCccEEEEecCCCccCCc---ccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH------HHHH---cCCC
Q 024578 10 ANYECLLFDLDDTLYPLS---TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA------GLKA---VGYE 77 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~ 77 (265)
.|.|+++.|+.||+..-. .....-..+.+.+++.+..+-+. ............|.... .+.+ .+..
T Consensus 2 ~m~kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e~~~--v~~~v~~v~~e~g~~~s~E~lva~~~~wiaed~K 79 (229)
T COG4229 2 VMVKAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTEDSE--VKKIVDEVLSEFGIANSEEALVALLLEWIAEDSK 79 (229)
T ss_pred cchhhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhccCCh--hhHHHHHHHHHhCccchHHHHHHHHHHHHhcccc
Confidence 345899999999997521 22233344456665555554332 11122233333333321 0101 1111
Q ss_pred CCh-HHHHH-HHhccccC--CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCC
Q 024578 78 FDN-DEFHA-FVHGKLPY--EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETIN 147 (265)
Q Consensus 78 ~~~-~~~~~-~~~~~~~~--~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~ 147 (265)
... ..+.- .|.+.+.- -+.+++|++.+.+++. +++++|.|+++....+-.+.+- ++..+|+..+-. .++
T Consensus 80 ~t~lK~lQG~iWa~Gy~sgelkahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDt-tiG 158 (229)
T COG4229 80 DTPLKALQGMIWAHGYESGELKAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDT-TIG 158 (229)
T ss_pred cchHHHHHhHHHHhccccCccccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeec-ccc
Confidence 111 11111 12222211 1467899999999875 6999999999988877776643 233445444322 223
Q ss_pred CCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCC-
Q 024578 148 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD- 226 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~- 226 (265)
.|....-|.++++..|++|.+++|+.|.++.+.+|+.+|+.+..+.+..+.+.+|
T Consensus 159 ------------------------~KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~ 214 (229)
T COG4229 159 ------------------------KKRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDG 214 (229)
T ss_pred ------------------------ccccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCC
Confidence 2778889999999999999999999999999999999999999987755433333
Q ss_pred ---ceecCHh
Q 024578 227 ---HALNSIH 233 (265)
Q Consensus 227 ---~~v~~~~ 233 (265)
.++.+++
T Consensus 215 ~~~~~~~sf~ 224 (229)
T COG4229 215 QGFLVYKSFE 224 (229)
T ss_pred cCceeeechh
Confidence 3555554
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.26 E-value=1e-10 Score=96.53 Aligned_cols=50 Identities=26% Similarity=0.476 Sum_probs=46.3
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcE-EEEcCCh-hcHHHHHHcCceEEEECCC
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKT-IFFDDSA-RNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~-i~vGD~~-~Di~~a~~aG~~~i~~~~~ 219 (265)
..+||++.+++.++++++++++++ +||||+. +|+.+|+++|+.++++.+|
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~G 236 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLTG 236 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEecC
Confidence 467999999999999999998887 9999998 7999999999999999764
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-11 Score=95.77 Aligned_cols=76 Identities=21% Similarity=0.390 Sum_probs=64.2
Q ss_pred cCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh-cHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHH
Q 024578 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK 236 (265)
Q Consensus 166 ~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~ 236 (265)
.+...+|||.+..|+.+++.+|++|++++||||..+ |+-.|+.+||..+.|..|.- +..++..++++.|-.
T Consensus 174 ~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AV 253 (262)
T KOG3040|consen 174 CEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAV 253 (262)
T ss_pred ceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHH
Confidence 455678999999999999999999999999999996 89999999999999976531 456777888887777
Q ss_pred HHHHH
Q 024578 237 EAIPE 241 (265)
Q Consensus 237 ~~l~~ 241 (265)
++|-+
T Consensus 254 d~I~q 258 (262)
T KOG3040|consen 254 DLIIQ 258 (262)
T ss_pred HHHHh
Confidence 66544
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.2e-10 Score=94.30 Aligned_cols=105 Identities=14% Similarity=0.050 Sum_probs=71.2
Q ss_pred CCCChhHHHHHh-cC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLL-SM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~-~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++|++.+.|+ .+ |.+++|+|+.....++++.+..++.. .+.+++.+-... .++.....+|.
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~------------~gg~~~g~~c~ 159 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERG------------NGGWVLPLRCL 159 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEe------------CCceEcCccCC
Confidence 467999999995 33 68999999999999999998865433 245555541111 11222333344
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
|.-|...+++.+ +.+.+.+.+.|||.+|+.|...+|-. +.|+
T Consensus 160 g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred ChHHHHHHHHHh---CCChhheEEecCCcccHHHHHhCCCc-EEEC
Confidence 555555555444 55667889999999999999999964 4443
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.9e-11 Score=97.52 Aligned_cols=43 Identities=16% Similarity=0.068 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
+-.|+.+++.+++++|++++++++|||+.||++|.+.+|..++
T Consensus 177 ~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va 219 (221)
T TIGR02463 177 SSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVV 219 (221)
T ss_pred CCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEE
Confidence 4567889999999999999999999999999999999998655
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.2e-10 Score=93.64 Aligned_cols=79 Identities=24% Similarity=0.282 Sum_probs=68.3
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh-cHHHHHHcCceEEEECCCCC------------CCCCCc
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP------------VPPADH 227 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-Di~~a~~aG~~~i~~~~~~~------------~~~a~~ 227 (265)
....-+++.++|||.+.+++.++++++++|++|+||||+.+ ||.-++++|++++++.+|.. +..+||
T Consensus 212 ~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDy 291 (306)
T KOG2882|consen 212 KFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDY 291 (306)
T ss_pred HHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCch
Confidence 56677788999999999999999999999999999999995 99999999999999977643 345888
Q ss_pred eecCHhHHHHHH
Q 024578 228 ALNSIHNIKEAI 239 (265)
Q Consensus 228 ~v~~~~el~~~l 239 (265)
.++++.++.+.+
T Consensus 292 y~~~l~d~~~~~ 303 (306)
T KOG2882|consen 292 YADSLGDLLPLL 303 (306)
T ss_pred HHhhHHHHhhhc
Confidence 888888877654
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.16 E-value=4.2e-11 Score=92.77 Aligned_cols=98 Identities=19% Similarity=0.340 Sum_probs=68.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC-ChhHHHHHHhHhCCc----------cccceeeecCCCCCCCCCCCCCCCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA-DQKHAMEVLGRLGLE----------DCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~-~~~~~~~~l~~~~~~----------~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+.+.++|++.++|+.+ +.+++++|.. ....+++.|+.+++. ++|+..-...
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~--------------- 106 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYP--------------- 106 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESS---------------
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheec---------------
Confidence 5678899999988887 5899999965 456899999999988 6666533222
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
-+|..-++.+.++.|++.++++||+|...++...+..|+.++.+.+|
T Consensus 107 -------------gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 107 -------------GSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp -------------S-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred -------------CchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 46789999999999999999999999999999999999999999987
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.1e-10 Score=88.40 Aligned_cols=52 Identities=23% Similarity=0.229 Sum_probs=47.6
Q ss_pred ccCCCCCHHH--H--HHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 169 RILCKPSLEA--I--ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 169 ~~~~kp~~~~--~--~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.++.||.+++ | +++++++|+.|++|+||+|+..++.+|+++|++++.+..++
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 3556999999 8 99999999999999999999999999999999999997653
|
|
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.2e-09 Score=89.96 Aligned_cols=124 Identities=17% Similarity=0.172 Sum_probs=83.5
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C-------CccccceeeecCCCC---CCCCCCCCCCCcc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G-------LEDCFEGIICFETIN---PRLQPADNTDGIE 160 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~-------~~~~fd~i~~~~~~~---~~~~~~~~~~~~~ 160 (265)
.+.+.||+.++|+.+ +.+++|+||.+...+...++.+ + +.++||.|+++..=. ....+=+..+...
T Consensus 182 yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 182 YVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred HhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 456789999999887 5889999999999999999996 6 779999998875311 1111111111111
Q ss_pred cCcCCcCcccCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHH-HcCceEEEECC
Q 024578 161 NNSFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 218 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~-~aG~~~i~~~~ 218 (265)
..-.......+.+.+ .--...+.+.+|+++++++||||+. .|+..++ .+||.++++-.
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 100111100000100 1234567788899999999999999 6999998 99999998853
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.5e-09 Score=90.50 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=44.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+.+|+.+++.+++.+|++++++++|||+.||+.|++.++..++.+.+..
T Consensus 165 ~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~ 213 (249)
T TIGR01485 165 GSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQ 213 (249)
T ss_pred CCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCCH
Confidence 5899999999999999999999999999999999999766677887664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.6e-10 Score=90.94 Aligned_cols=95 Identities=19% Similarity=0.309 Sum_probs=62.5
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCH
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 176 (265)
|++.++++.+ +.+++|+|++....++.+++.+++.. +.++++.. ... + +....+...+... + .|.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~--~~v~~~~~-~~~----~--~~~~~~~~~~~~~--~-~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDD--DNVIGNEL-FDN----G--GGIFTGRITGSNC--G-GKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSE--GGEEEEEE-ECT----T--CCEEEEEEEEEEE--S-HHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEEEEEee-eec----c--cceeeeeECCCCC--C-cHH
Confidence 5666888665 79999999999999999999988763 23444443 110 0 0000001111000 0 267
Q ss_pred HHHHHH---HHHcCCCCCcEEEEcCChhcHHHHH
Q 024578 177 EAIETA---IRIANVDPKKTIFFDDSARNIASAK 207 (265)
Q Consensus 177 ~~~~~~---~~~lg~~~~~~i~vGD~~~Di~~a~ 207 (265)
..++.+ ... +.+++.+++||||.+|+.+++
T Consensus 160 ~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 777777 445 888999999999999999985
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.9e-10 Score=96.17 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=50.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIH 233 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~ 233 (265)
+-.|..+++.+++.+|++++++++|||+.||+.|++.+|+.+++.+.... +..|++++.+.+
T Consensus 186 ~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 186 GVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNN 248 (256)
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCC
Confidence 57889999999999999999999999999999999999987666433222 556777776644
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.5e-09 Score=89.62 Aligned_cols=69 Identities=17% Similarity=0.064 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCC----ceecCH--hHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPAD----HALNSI--HNIKEAIPE 241 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~----~~v~~~--~el~~~l~~ 241 (265)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|...+ +.+... +..++ +++.+. +.+.+.|.+
T Consensus 157 ~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~ia-v~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 157 RASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVV-VGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEE-EcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 5899999999999999999999999999999999999997654 554433 34455 555432 236665544
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.1e-09 Score=88.18 Aligned_cols=87 Identities=14% Similarity=0.090 Sum_probs=69.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHH--HHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAM--EVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~--~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.++||+.++|+.+ +.+++++||....... ..++.+|+.. +|+.|+++.+..
T Consensus 24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~----------------------- 80 (242)
T TIGR01459 24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIA----------------------- 80 (242)
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHH-----------------------
Confidence 4677888887776 5889999998887665 7889999987 899999877432
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
...+..++++++.+++++++|||+..|+.....+|.
T Consensus 81 -----~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 81 -----VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 246667778889999999999999999887765553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.01 E-value=5.4e-09 Score=87.04 Aligned_cols=83 Identities=13% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChh---HHHHHHhHhCCccc-cceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDC-FEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l~~~~~~~~-fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
....++||+.++++.+ |.+++++||.... .....|+.+|+... ++.++..++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~--------------------- 173 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKD--------------------- 173 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCC---------------------
Confidence 3457899999999866 6889999998744 45577888888753 466665542
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASA 206 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a 206 (265)
.++|+...+.+.+.+++ +++|||+.+|+..+
T Consensus 174 -----~~~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~ 204 (266)
T TIGR01533 174 -----KSSKESRRQKVQKDYEI----VLLFGDNLLDFDDF 204 (266)
T ss_pred -----CCCcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence 25677888888887776 89999999999653
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.4e-09 Score=87.99 Aligned_cols=71 Identities=15% Similarity=0.134 Sum_probs=54.0
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEcCChhcHHHHHHcCceEEEECCCC---C-CCC--C-CceecCH--hHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSSV---P-VPP--A-DHALNSI--HNIKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~--~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~---~-~~~--a-~~~v~~~--~el~~~l~ 240 (265)
+-.|...++++++.+|++ ++++++|||+.||+.|.+.+|..+++-+... . +.. + +++..+. +.+.+.|+
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 478899999999999999 9999999999999999999998766655542 2 333 3 3666443 33666666
Q ss_pred HH
Q 024578 241 EI 242 (265)
Q Consensus 241 ~~ 242 (265)
++
T Consensus 254 ~~ 255 (256)
T TIGR01486 254 HL 255 (256)
T ss_pred Hh
Confidence 54
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.2e-09 Score=90.63 Aligned_cols=95 Identities=20% Similarity=0.176 Sum_probs=68.5
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccccee--eecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGI--ICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+|++.++++.+ +.++ |+||.+.......+..++...+|..+ .+.+.. ..+|
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~~~~-----------------------~~gK 195 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGGKVI-----------------------YSGK 195 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCCcEe-----------------------cCCC
Confidence 56776666654 3444 77777766665555555555445443 222221 2379
Q ss_pred CCHHHHHHHHHHcCCC-CCcEEEEcCC-hhcHHHHHHcCceEEEEC
Q 024578 174 PSLEAIETAIRIANVD-PKKTIFFDDS-ARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~-~~~~i~vGD~-~~Di~~a~~aG~~~i~~~ 217 (265)
|++++++.++++++.. +++++||||+ .+|+.+|+++|+.++++.
T Consensus 196 P~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~ 241 (242)
T TIGR01459 196 PYPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALVL 241 (242)
T ss_pred CCHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEEe
Confidence 9999999999999975 6789999999 599999999999999885
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2e-09 Score=89.12 Aligned_cols=62 Identities=26% Similarity=0.338 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN 234 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e 234 (265)
+-.|..+++.+++.+|++++++++|||+.||++|.+.+|.. +.+.++.. +..|++++++..+
T Consensus 184 ~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~-~am~na~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 184 GVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYS-VAMGNATPELKKAADYITPSNND 247 (254)
T ss_dssp TSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEE-EEETTS-HHHHHHSSEEESSGTC
T ss_pred CCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeE-EEEcCCCHHHHHhCCEEecCCCC
Confidence 46789999999999999999999999999999999999976 55554433 5667787777665
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.9e-08 Score=77.67 Aligned_cols=76 Identities=18% Similarity=0.281 Sum_probs=56.2
Q ss_pred cEEEEeCCC-------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHH
Q 024578 112 RKIIFTNAD-------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184 (265)
Q Consensus 112 ~~~i~s~~~-------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~ 184 (265)
++.|+||+. ...++..-+.+|+. .+.... .|| ..++.+++
T Consensus 79 ~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp----vl~h~~---------------------------kKP--~~~~~i~~ 125 (168)
T PF09419_consen 79 RVLIVSNSAGSSDDPDGERAEALEKALGIP----VLRHRA---------------------------KKP--GCFREILK 125 (168)
T ss_pred eEEEEECCCCcccCccHHHHHHHHHhhCCc----EEEeCC---------------------------CCC--ccHHHHHH
Confidence 689999983 55666677777743 222211 266 55566666
Q ss_pred HcCC-----CCCcEEEEcCCh-hcHHHHHHcCceEEEECCCC
Q 024578 185 IANV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 185 ~lg~-----~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~ 220 (265)
.++. +|+++++|||.. +|+.++...|+.++++..|.
T Consensus 126 ~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~gv 167 (168)
T PF09419_consen 126 YFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDGV 167 (168)
T ss_pred HHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecCc
Confidence 6654 599999999999 79999999999999998763
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.6e-08 Score=83.71 Aligned_cols=72 Identities=19% Similarity=0.243 Sum_probs=61.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc----CceEEEECCCCCCCCCCceecCHhHHHHHHHHHhcCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a----G~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
+..|..+++++++.+|++.+++++|||+.||..|.+.+ |. ++.+.++ ...|.+.+++.+++..+|..+....
T Consensus 172 g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~-~vavg~a--~~~A~~~l~~~~~v~~~L~~l~~~~ 247 (266)
T PRK10187 172 GTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGI-SVKVGTG--ATQASWRLAGVPDVWSWLEMITTAQ 247 (266)
T ss_pred CCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCe-EEEECCC--CCcCeEeCCCHHHHHHHHHHHHHhh
Confidence 46889999999999999999999999999999999988 54 5555544 4668899999999999999987543
|
|
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.83 E-value=9e-09 Score=82.24 Aligned_cols=119 Identities=18% Similarity=0.245 Sum_probs=70.7
Q ss_pred HHHHHHHhccccCCCCCCChhHHHHHhcCC---CcEEEEeCCChh-------HHHHHHhHh-CCccccceeeecCCCCCC
Q 024578 81 DEFHAFVHGKLPYEKLKPDPVLRNLLLSMP---QRKIIFTNADQK-------HAMEVLGRL-GLEDCFEGIICFETINPR 149 (265)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~---~~~~i~s~~~~~-------~~~~~l~~~-~~~~~fd~i~~~~~~~~~ 149 (265)
+.+...+.+.-.+..++|+||+.+++++|. ..++++|+.... .....++++ +. ..++.++.+.+
T Consensus 57 ~~~~~~~~~~~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---- 131 (191)
T PF06941_consen 57 EKLWRFYEEPGFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---- 131 (191)
T ss_dssp HHHHHHHTSTTTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS----
T ss_pred HHHHHHHhChhhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC----
Confidence 344455555444678999999999999983 356666654432 344555554 32 12334333221
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCC-CCce
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-ADHA 228 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~-a~~~ 228 (265)
|. .++.+ ++|+|++..+..+...|+..+++..+.+... .-..
T Consensus 132 -----------------------K~----------~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~~~~R 174 (191)
T PF06941_consen 132 -----------------------KT----------LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDESNFPR 174 (191)
T ss_dssp -----------------------GG----------GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT--TSEE
T ss_pred -----------------------CC----------eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCCCCcc
Confidence 31 12222 8999999999999999999999987766333 4779
Q ss_pred ecCHhHHHHHHHH
Q 024578 229 LNSIHNIKEAIPE 241 (265)
Q Consensus 229 v~~~~el~~~l~~ 241 (265)
+.+++|+.+.+-.
T Consensus 175 v~~W~ei~~~i~~ 187 (191)
T PF06941_consen 175 VNNWEEIEDLILS 187 (191)
T ss_dssp E-STTSHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 9999999988743
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=98.80 E-value=5e-09 Score=80.99 Aligned_cols=89 Identities=20% Similarity=0.310 Sum_probs=57.4
Q ss_pred hhHHHHHhcC---CCcEEEEeCCC---h-----------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 100 PVLRNLLLSM---PQRKIIFTNAD---Q-----------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~---~-----------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
|++.+.|+.+ +++++|+||.. . ..+..+++.+++. + .++++.....
T Consensus 32 ~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a~~~d~-------------- 94 (159)
T PF08645_consen 32 PGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAAPHKDP-------------- 94 (159)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEECGCSST--------------
T ss_pred hhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEecCCCCC--------------
Confidence 4566666665 78999999852 1 2234455556554 2 3333332222
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC----CCCCcEEEEcCC-----------hhcHHHHHHcCceE
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDS-----------ARNIASAKAAGLHT 213 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg----~~~~~~i~vGD~-----------~~Di~~a~~aG~~~ 213 (265)
.+||++-+++.+++.++ ++.++++||||. -.|..-|.++|+.+
T Consensus 95 --------~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f 152 (159)
T PF08645_consen 95 --------CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKF 152 (159)
T ss_dssp --------TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--E
T ss_pred --------CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCcc
Confidence 25999999999999987 499999999996 46899999999864
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.5e-08 Score=91.88 Aligned_cols=112 Identities=16% Similarity=0.251 Sum_probs=84.4
Q ss_pred CCCCChhHHHHHhcC---CC-cEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---PQ-RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~-~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.-.++||+.+.++.| |. +++++|+.+...++..++++|+..+|..+..
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p---------------------------- 411 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP---------------------------- 411 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc----------------------------
Confidence 346789999998888 57 8999999999999999999999776643211
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
.+|.. ++++++...++++||||+.||+.+++++|+...+-..+.. ...+|.++ +++.+|.+.+.
T Consensus 412 --~~K~~----~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 412 --EDKLE----IVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred --HHHHH----HHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHH
Confidence 33444 4555555568999999999999999999974444322222 55789988 88998877553
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.8e-08 Score=91.21 Aligned_cols=110 Identities=14% Similarity=0.241 Sum_probs=82.3
Q ss_pred CCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
+..++||+.+.++.| + .+++++|+.+...++..++++|+.++|..+..
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~p---------------------------- 433 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELLP---------------------------- 433 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCCH----------------------------
Confidence 357789999998887 6 78999999999999999999999766654311
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
++|.+. +++++..+++++||||+.||+.+++++|+...+- ++.. ...+|+++. ++..+.+++
T Consensus 434 --~~K~~~----v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i 499 (556)
T TIGR01525 434 --EDKLAI----VKELQEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAI 499 (556)
T ss_pred --HHHHHH----HHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHH
Confidence 334444 4444446779999999999999999999654443 2222 457888887 677766654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=98.72 E-value=5e-08 Score=81.31 Aligned_cols=104 Identities=18% Similarity=0.201 Sum_probs=69.8
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc-----cCcCCcCcc-c
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE-----NNSFSSNQR-I 170 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~ 170 (265)
||+.++|+.| |.+++|+|++....+...++.+|+..+|+.++++++.......+...|-.+ ..++..... .
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~ 228 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDG 228 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCC
Confidence 6666666666 688999999999999999999999999999999987765432222223333 222222221 1
Q ss_pred CCCCC-HHHHHHHHHHcCCCC-CcEEEEcCCh-hcH
Q 024578 171 LCKPS-LEAIETAIRIANVDP-KKTIFFDDSA-RNI 203 (265)
Q Consensus 171 ~~kp~-~~~~~~~~~~lg~~~-~~~i~vGD~~-~Di 203 (265)
-.-|| |..+...+++.|+.- +.+-.|+|=. ||+
T Consensus 229 ~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 229 KRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred CcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 12244 577778888999853 4556677766 554
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-07 Score=86.56 Aligned_cols=45 Identities=11% Similarity=0.076 Sum_probs=40.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE--cCChhcHHHHHHcCceEEEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFF--DDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~v--GD~~~Di~~a~~aG~~~i~~ 216 (265)
+-.|..+++.+++.++++.++++.| ||+.||+.|.+.+|+.+++-
T Consensus 611 gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~ 657 (694)
T PRK14502 611 GNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQ 657 (694)
T ss_pred CCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEc
Confidence 4688999999999999999999999 99999999999999866653
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.4e-07 Score=76.52 Aligned_cols=104 Identities=18% Similarity=0.213 Sum_probs=68.1
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc-----cCcCCcCcc-c
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE-----NNSFSSNQR-I 170 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~ 170 (265)
|++.++|+.| |.+++|+|++....+...++.+|+..+|+.++++++......-+...|-.+ ..++..... .
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~ 230 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDV 230 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcc
Confidence 4555555555 689999999999999999999999999999999987654321112222222 222222221 1
Q ss_pred CCCCC-HHHHHHHHHHcCCC-CCcEEEEcCCh-hcH
Q 024578 171 LCKPS-LEAIETAIRIANVD-PKKTIFFDDSA-RNI 203 (265)
Q Consensus 171 ~~kp~-~~~~~~~~~~lg~~-~~~~i~vGD~~-~Di 203 (265)
-.-|| |..+...+++.|+. .+.+-.|+|=. ||+
T Consensus 231 ~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~Nn~ 266 (303)
T PHA03398 231 KNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY 266 (303)
T ss_pred cCCCCCCeehHHHHHHcCcceeccEEEeccCcccCc
Confidence 12344 57777889999985 34566677766 555
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.8e-08 Score=77.15 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=80.3
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
+...||+.++|+.+. +.++|.|++...+++.+++.++... +|+.+++.+.....
T Consensus 41 v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~----------------------- 97 (162)
T TIGR02251 41 VFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFT----------------------- 97 (162)
T ss_pred EEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEe-----------------------
Confidence 466799999999984 7899999999999999999999775 88999887754432
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
+|+ +.+.++.+|.+++++++|||+..|+.++.+.|+.+....
T Consensus 98 ~~~---~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 98 NGK---YVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred CCC---EEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCC
Confidence 444 556788889999999999999999999999988766554
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.9e-07 Score=76.54 Aligned_cols=43 Identities=12% Similarity=0.145 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~--~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
+-.|+.+++.+++.+++ +++++++|||+.||+.|.+.+|+..+
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~ 223 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFL 223 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEe
Confidence 46778899999999876 67799999999999999999998654
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.8e-06 Score=72.29 Aligned_cols=46 Identities=15% Similarity=0.161 Sum_probs=36.6
Q ss_pred CCCHHHHHHHHHHcCCC--CCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 173 KPSLEAIETAIRIANVD--PKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~--~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
-+|..+++.+.+.+.-. +-.++.+|||+||+.|...+.+.. .+.+.
T Consensus 207 ~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~v-vi~~~ 254 (302)
T PRK12702 207 LPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKV-VLPSP 254 (302)
T ss_pred CCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeE-EecCC
Confidence 57888999998887653 448999999999999999999754 44443
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.57 E-value=5.6e-07 Score=65.26 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=89.6
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
-.+++.+.+.++.|. ..++|.|+.....+.+.++..|+. .+.++..
T Consensus 29 Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~~gi~--~~rv~a~------------------------------ 76 (152)
T COG4087 29 GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEFVGIP--VERVFAG------------------------------ 76 (152)
T ss_pred cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHHcCCc--eeeeecc------------------------------
Confidence 356677777777774 788999999999999999999876 4454442
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~~~l~~~ 242 (265)
.+++.-..+++.++-+-+.|+||||+.||+.+.+++....+-+..... -..||+++.+..|+.+++...
T Consensus 77 a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 77 ADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 235566788888887779999999999999999999887666654332 356999999999999887654
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.1e-07 Score=85.16 Aligned_cols=108 Identities=16% Similarity=0.216 Sum_probs=79.2
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.++.|++.++++.+ +++++++|+.+...++..++.+|++ ++ ++. . .
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~-~~~-~------------------------p 452 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VR-AEV-L------------------------P 452 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EE-ccC-C------------------------h
Confidence 46789998888777 5889999999999999999999984 22 111 0 1
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
++|.+.++.+. .++++|+||||+.||+.+++++|+...+- ++.. ...+|+++. ++.+|.+++
T Consensus 453 ~~K~~~v~~l~----~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i 518 (562)
T TIGR01511 453 DDKAALIKELQ----EKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAI 518 (562)
T ss_pred HHHHHHHHHHH----HcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHH
Confidence 44555554443 36789999999999999999999854433 3322 557888884 777777655
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.1e-06 Score=78.25 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=55.4
Q ss_pred CCCCHHHHHHHHHHc---CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CC--------CCCceec---CHhHH
Q 024578 172 CKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VP--------PADHALN---SIHNI 235 (265)
Q Consensus 172 ~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~--------~a~~~v~---~~~el 235 (265)
+-.|..+++.+++++ |++++++++|||+.||++|.+.+|...+.+.+... +. .++++.. .-+.+
T Consensus 173 g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI 252 (413)
T PLN02382 173 GAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGI 252 (413)
T ss_pred CCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHH
Confidence 467899999999999 99999999999999999999999954566655543 11 2233322 34568
Q ss_pred HHHHHHHhcC
Q 024578 236 KEAIPEIWEG 245 (265)
Q Consensus 236 ~~~l~~~~~~ 245 (265)
.+.|.++.-.
T Consensus 253 ~~al~~f~l~ 262 (413)
T PLN02382 253 IQAIGHFNLG 262 (413)
T ss_pred HHHHHHhCCC
Confidence 8888877644
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.9e-07 Score=88.08 Aligned_cols=137 Identities=16% Similarity=0.207 Sum_probs=98.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+....+.+|+...++.++++.+....+. ..-.-...+..+.+.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~-------~~l~~~~~~~~Vfar 600 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDD-------QQLSQIVPKVAVFAR 600 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCH-------HHHHHHhhcCeEEEE
Confidence 6678999888877 689999999999999999999999877777766654432100 000001122234456
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
..|+--..+++.++-..+.+.|+||+.||..+++.|+++..+-..+.. +..+|+++ +++..+...+.
T Consensus 601 ~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 601 ASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 777777778887776778999999999999999999986554222322 56789999 56888877654
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=98.40 E-value=4.7e-06 Score=69.18 Aligned_cols=54 Identities=11% Similarity=0.089 Sum_probs=43.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..+++.++ +++++++||| +.||++|.+.-|+.++- |++++|+.+.+.+++
T Consensus 187 gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~-------------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 187 GWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHT-------------VTSPDDTREQCTALF 244 (245)
T ss_pred CCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEE-------------eCCHHHHHHHHHHhc
Confidence 567788888888 8999999999 79999999887876654 455677777777664
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.38 E-value=2.5e-07 Score=76.94 Aligned_cols=48 Identities=19% Similarity=0.293 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+-.|..+++++++++++++++++++|||.||+.|. ..+...+.|.+..
T Consensus 163 ~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~Na~ 210 (247)
T PF05116_consen 163 GASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGNAQ 210 (247)
T ss_dssp T-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TTS-
T ss_pred CCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcCCC
Confidence 35679999999999999999999999999999999 6667888887753
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.5e-06 Score=72.18 Aligned_cols=71 Identities=13% Similarity=0.131 Sum_probs=62.8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc-------CceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-------GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a-------G~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
-.|+..++.++++++++++++++|||+.||+.|++.+ |..++.+..+..+..|++++++.+++.++|..+.
T Consensus 166 ~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 166 VNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred CCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 4567999999999999999999999999999999999 6677778767777889999999999999987764
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.35 E-value=1.6e-05 Score=72.22 Aligned_cols=100 Identities=11% Similarity=0.052 Sum_probs=61.8
Q ss_pred CChhHHHHHhcCCCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCH
Q 024578 98 PDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176 (265)
Q Consensus 98 ~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~ 176 (265)
+.|...+.++..+.. +|+|......++..++. +| +|.+++.+.... .++-+.+......++.|.-|.
T Consensus 111 l~~~a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LG----id~VIgTeLev~-------~~G~~TG~i~g~~~c~Ge~Kv 178 (497)
T PLN02177 111 VHPETWRVFNSFGKR-YIITASPRIMVEPFVKTFLG----ADKVLGTELEVS-------KSGRATGFMKKPGVLVGDHKR 178 (497)
T ss_pred cCHHHHHHHHhCCCE-EEEECCcHHHHHHHHHHcCC----CCEEEecccEEC-------cCCEEeeeecCCCCCccHHHH
Confidence 667788888777654 99999999999999976 66 456666552110 011111111111122333344
Q ss_pred HHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE
Q 024578 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 213 (265)
Q Consensus 177 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~ 213 (265)
..++ +.+|.+... ++.|||.+|..+...|+-..
T Consensus 179 ~rl~---~~~g~~~~~-~aYgDS~sD~plL~~a~e~y 211 (497)
T PLN02177 179 DAVL---KEFGDALPD-LGLGDRETDHDFMSICKEGY 211 (497)
T ss_pred HHHH---HHhCCCCce-EEEECCccHHHHHHhCCccE
Confidence 4443 556654444 89999999999999998543
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=2.2e-06 Score=83.26 Aligned_cols=110 Identities=13% Similarity=0.199 Sum_probs=80.6
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
-++.|++.+.++.+ +++++++|+.+....+..++.+|+..+|..+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~~~~~-------------------------------- 696 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEVIAGV-------------------------------- 696 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEEEeCC--------------------------------
Confidence 35678988888777 5889999999999999999999987544321
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCc--eecCHhHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH--ALNSIHNIKEAIP 240 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~--~v~~~~el~~~l~ 240 (265)
.| +.-..++++++..+++++||||+.||+.+++++|+..++- ++.. ...+|. ..+++.+|..++.
T Consensus 697 ~p--~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 697 LP--DGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALA 765 (834)
T ss_pred CH--HHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHH
Confidence 11 1223466667777889999999999999999999955444 3322 334454 4467888877765
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.4e-07 Score=76.16 Aligned_cols=44 Identities=11% Similarity=-0.045 Sum_probs=37.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~ 218 (265)
.+-.|..+++.+++. ++++++||| +.||++|.+.++.....+.+
T Consensus 185 ~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 185 KGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred CCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 367889999999998 599999999 89999999988776566654
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=8.7e-06 Score=66.22 Aligned_cols=98 Identities=10% Similarity=0.061 Sum_probs=63.7
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
.+.++.|++.++++.+ |.+++++|+.+... +...|...|+..+ +.++....-..
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~-~~LiLR~~~d~------------------- 176 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW-KHLILRGLEDS------------------- 176 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc-CeeeecCCCCC-------------------
Confidence 4557899999998876 68999999998766 6677777786643 55555431111
Q ss_pred cccCCCC----CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKP----SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp----~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
+++ |.+..+++.+ -|. .=+..|||..+|+.+. .+|.+++-++++
T Consensus 177 ----~~~~~~yKs~~R~~l~~-~GY--rIv~~iGDq~sDl~G~-~~~~RtFKLPNP 224 (229)
T TIGR01675 177 ----NKTVVTYKSEVRKSLME-EGY--RIWGNIGDQWSDLLGS-PPGRRTFKLPNP 224 (229)
T ss_pred ----CchHhHHHHHHHHHHHh-CCc--eEEEEECCChHHhcCC-CccCceeeCCCC
Confidence 122 3344444443 233 2368899999999653 666666666554
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.13 E-value=7.5e-06 Score=59.48 Aligned_cols=86 Identities=14% Similarity=0.168 Sum_probs=60.8
Q ss_pred CCCCCChhHHHHHhcCCCc---EEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSMPQR---KIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~~~---~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++|.+.++++.++.. +..+|=+....+.+.|+.+++..+|+.++.-+.-
T Consensus 38 ~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~ViePhP------------------------ 93 (164)
T COG4996 38 REVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIEPHP------------------------ 93 (164)
T ss_pred eEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEecCCC------------------------
Confidence 3467899999999998644 4455556677788899999999999998763311
Q ss_pred CCCCCHHHHHHHHHHc------CCCCCcEEEEcCChhcHHHH
Q 024578 171 LCKPSLEAIETAIRIA------NVDPKKTIFFDDSARNIASA 206 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~l------g~~~~~~i~vGD~~~Di~~a 206 (265)
-|..++-++++.. .+.|.+++|++|..--+.-.
T Consensus 94 ---~K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~I 132 (164)
T COG4996 94 ---YKFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNI 132 (164)
T ss_pred ---hhHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHH
Confidence 1134555555443 46899999999998544333
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.13 E-value=3.1e-06 Score=69.46 Aligned_cols=99 Identities=11% Similarity=0.058 Sum_probs=59.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChh---HHHHHHhHhCCccccceeeecCCCC-CCCCCCCCCCCcccCcCCcCcc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFETIN-PRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l~~~~~~~~fd~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
.++|++.++++.+ |..++++|+.+.. ....-|...|...+ +.++....-. .. .
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr~~~~~~~------------~------- 174 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILRPDKDPSK------------K------- 174 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEEEESSTSS--------------------
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhcccccccccc------------c-------
Confidence 6788899888766 7999999997655 45556777786543 4544333211 10 0
Q ss_pred cCCCCCHHHHHHHHHH-cCCCCCcEEEEcCChhcHHHHHHc---CceEEEECCC
Q 024578 170 ILCKPSLEAIETAIRI-ANVDPKKTIFFDDSARNIASAKAA---GLHTVIVGSS 219 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di~~a~~a---G~~~i~~~~~ 219 (265)
....-|.+-.+.+.++ +.+ +++|||..+|+..++.. |-+.+.++++
T Consensus 175 ~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~~~~~~~~~~r~f~lPNp 224 (229)
T PF03767_consen 175 SAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSGAKTAGARAERWFKLPNP 224 (229)
T ss_dssp -----SHHHHHHHHHTTEEE----EEEEESSGGGCHCTHHHHHHHTTEEE-TTS
T ss_pred cccccchHHHHHHHHcCCcE----EEEeCCCHHHhhcccccccccceEEEcCCC
Confidence 0001245555555555 444 89999999999884433 3456666553
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.9e-05 Score=77.39 Aligned_cols=136 Identities=12% Similarity=0.136 Sum_probs=89.4
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc----cceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC----FEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~----fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
++.|++.+.++.+ +++++++|+.....+....+.+|+... ....+.+.+.... +.......+.+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~-------~~~~~~~~~~~~~ 609 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM-------GPAKQRAACRSAV 609 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC-------CHHHHHHhhhcCe
Confidence 4568888887776 699999999999999999999998531 1122332221110 0000001112222
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIP 240 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l~ 240 (265)
+.++..|+--.++++.++-..+.+.|+||+.||+.+.+.|+++..+- ++.. +..+|+++.+ +..+.+.+.
T Consensus 610 v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 610 LFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVE 683 (917)
T ss_pred EEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHH
Confidence 33455565556777777766788899999999999999999965543 4432 5679999987 777777653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.00044 Score=57.54 Aligned_cols=116 Identities=21% Similarity=0.182 Sum_probs=70.6
Q ss_pred hhHHHHHhcCCCcEEEEeCCChhHHHH---HHhHhCCccccceee-ecCCCC--CCCCCCCCCCCcccCc-CCcCcccCC
Q 024578 100 PVLRNLLLSMPQRKIIFTNADQKHAME---VLGRLGLEDCFEGII-CFETIN--PRLQPADNTDGIENNS-FSSNQRILC 172 (265)
Q Consensus 100 p~~~~~l~~l~~~~~i~s~~~~~~~~~---~l~~~~~~~~fd~i~-~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 172 (265)
|.+.+.++.-+.+++.+|......... .|+.+|++ |+... ..+..- ....+...-.+.+..| .+ +-+
T Consensus 87 ~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf----t~~ 160 (252)
T PF11019_consen 87 PNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILF----TGG 160 (252)
T ss_pred HHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEE----eCC
Confidence 445555555578899999887665554 44455655 33321 111100 0000111222223222 22 225
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHH----cCceEEEECCCCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA----AGLHTVIVGSSVP 221 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~----aG~~~i~~~~~~~ 221 (265)
-+|++++..++.+.|..|+.++||+|+..++....+ .|+.+.++.+...
T Consensus 161 ~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 161 QDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHYTGA 213 (252)
T ss_pred CccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEEcch
Confidence 788999999999999999999999999987665444 5888888876543
|
The function is not known. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.1e-05 Score=74.17 Aligned_cols=106 Identities=18% Similarity=0.268 Sum_probs=73.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.| +++++++|+.+...++.+.+.+|+..++. .. + .
T Consensus 568 ~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~~~------~~--p-----------------------~ 616 (741)
T PRK11033 568 TLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFRAG------LL--P-----------------------E 616 (741)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCeecC------CC--H-----------------------H
Confidence 6678999988777 68999999999999999999999852221 00 0 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l 239 (265)
-|+..+ ++++ .++.++||||+.||..+++.+++..++- ++.. ...+|.++ +++..|.+.+
T Consensus 617 ~K~~~v----~~l~-~~~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i 680 (741)
T PRK11033 617 DKVKAV----TELN-QHAPLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMI 680 (741)
T ss_pred HHHHHH----HHHh-cCCCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHH
Confidence 234444 4444 3468999999999999999999766554 3322 34566655 4565655443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00015 Score=55.97 Aligned_cols=100 Identities=13% Similarity=0.104 Sum_probs=57.8
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCChhHHH---HHHhHh---CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~~~~~---~~l~~~---~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
.|++.++++++ +.+++++|+.+..... ..+..+ +..-....++++...... ...+..
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~---------~~~~e~----- 94 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFA---------ALHREV----- 94 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchh---------hhhccc-----
Confidence 46777777665 5889999999877764 566662 211112345554421110 000000
Q ss_pred cCCCC---CHHHHHHHHHHcCCCCCcE-EEEcCChhcHHHHHHcCce
Q 024578 170 ILCKP---SLEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 170 ~~~kp---~~~~~~~~~~~lg~~~~~~-i~vGD~~~Di~~a~~aG~~ 212 (265)
...+| |.+.++.+.+.+.-..-.. ..+||+.+|+.+=+++|+.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 11234 5667777777664222233 4588889999999999983
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.90 E-value=9e-05 Score=59.76 Aligned_cols=94 Identities=17% Similarity=0.230 Sum_probs=61.7
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhH----HHHHHhHhCCcccc-ceeeecCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKH----AMEVLGRLGLEDCF-EGIICFETINPR 149 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~----~~~~l~~~~~~~~f-d~i~~~~~~~~~ 149 (265)
+.++.+...... ....+.||+.+++... |.+++.+||...+. ...-|++.|+.... ++++.-.+
T Consensus 107 f~pe~Wd~wV~a----~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~llkk~---- 178 (274)
T COG2503 107 FTPETWDKWVQA----KKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHLLLKKD---- 178 (274)
T ss_pred CCccchHHHHhh----cccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccceEEeeC----
Confidence 334444444433 4568999999999987 58899999987665 44566667766433 33333221
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHH
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 205 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~ 205 (265)
.|+|..-.+.+-+.+ +-++.|||+..|+..
T Consensus 179 ----------------------~k~Ke~R~~~v~k~~----~iVm~vGDNl~DF~d 208 (274)
T COG2503 179 ----------------------KKSKEVRRQAVEKDY----KIVMLVGDNLDDFGD 208 (274)
T ss_pred ----------------------CCcHHHHHHHHhhcc----ceeeEecCchhhhcc
Confidence 267776666666544 458999999988643
|
|
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.4e-05 Score=68.36 Aligned_cols=122 Identities=19% Similarity=0.207 Sum_probs=65.6
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C--------CccccceeeecCC---CCCCCCCCCCCCCcc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G--------LEDCFEGIICFET---INPRLQPADNTDGIE 160 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~--------~~~~fd~i~~~~~---~~~~~~~~~~~~~~~ 160 (265)
+...|.+..+|+.+ |.+++++||.+...+...+..+ | ..++||.|++... .-....+-+.++...
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 44567888887776 5789999999999999888864 2 3478999988531 000000111111111
Q ss_pred cCcCCcC-cccCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHc-CceEEEEC
Q 024578 161 NNSFSSN-QRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAA-GLHTVIVG 217 (265)
Q Consensus 161 ~~~~~~~-~~~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~a-G~~~i~~~ 217 (265)
....... ...+.+.+ .--...+.+.+|....+++||||+. .||...+.. ||+++++-
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii 324 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAII 324 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEe
Confidence 1111110 00111110 1234466777888889999999999 697766665 99999884
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.87 E-value=9.2e-05 Score=56.24 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=74.0
Q ss_pred ChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCc-cccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCC
Q 024578 99 DPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175 (265)
Q Consensus 99 ~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~-~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~ 175 (265)
..++...|..++ .+++.+|.......+..-..+... ..++++...+..+ |
T Consensus 74 ~q~v~~~L~~~~e~~~L~~itar~~dl~~iT~~~l~~q~ih~~~l~i~g~h~-------------------------K-- 126 (194)
T COG5663 74 AQLVKQVLPSLKEEHRLIYITARKADLTRITYAWLFIQNIHYDHLEIVGLHH-------------------------K-- 126 (194)
T ss_pred HHHHHHHhHHHHhhceeeeeehhhHHHHHHHHHHHHHhccchhhhhhhcccc-------------------------c--
Confidence 345666666663 677888877666555444444322 2355544333221 2
Q ss_pred HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCCCC---CCCceecCHhHHHHHHHHHhcCC
Q 024578 176 LEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPVP---PADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 176 ~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~~~---~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
-.+++...++ +++.|+. |-.+.|+++|+..+.+++..+.. .+-..+.++.+-.+.+...++++
T Consensus 127 ----V~~vrth~id----lf~ed~~~na~~iAk~~~~~vilins~ynRkp~~~niiR~~~w~e~y~~vd~~~kR~ 193 (194)
T COG5663 127 ----VEAVRTHNID----LFFEDSHDNAGQIAKNAGIPVILINSPYNRKPAAKNIIRANNWAEAYEWVDSRLKRS 193 (194)
T ss_pred ----chhhHhhccC----ccccccCchHHHHHHhcCCcEEEecCcccccchHHHHHHHHhHHHHHHHHHHHhccC
Confidence 2467778886 6999999 56888888999999999877633 23345678888888888777654
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00018 Score=51.18 Aligned_cols=48 Identities=21% Similarity=0.232 Sum_probs=30.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~ 144 (265)
.++||+.++++.+ +.+++++||++... ....|+.+|+.-..+.|+++.
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~ 67 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG 67 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH
Confidence 4677888877766 68899999986443 445567788775556676654
|
... |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0004 Score=57.68 Aligned_cols=104 Identities=9% Similarity=0.056 Sum_probs=60.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...++.|++.++.+.+ |.+++++|+.+... ...-|...|...+ +.++..+.-... ..
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~-~~LiLR~~~D~~-----------~~----- 204 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW-EKLILKDPQDNS-----------AE----- 204 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc-ceeeecCCCCCc-----------cc-----
Confidence 4567889999988776 68999999997654 4455556676543 555554321110 00
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
...+-|....+++.+ -|. .=+..|||..+|+.+....+-+++-++++
T Consensus 205 --~av~yKs~~R~~li~-eGY--rIv~~iGDq~sDl~G~~~g~~RtFKLPNP 251 (275)
T TIGR01680 205 --NAVEYKTAARAKLIQ-EGY--NIVGIIGDQWNDLKGEHRGAIRSFKLPNP 251 (275)
T ss_pred --hhHHHHHHHHHHHHH-cCc--eEEEEECCCHHhccCCCccCcceecCCCc
Confidence 000122333333332 333 23688999999996554223466666655
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.78 E-value=2.5e-05 Score=62.84 Aligned_cols=43 Identities=19% Similarity=0.198 Sum_probs=40.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
+.+|+.+++.++++++++++++++|||+.||+.|++.+|+..+
T Consensus 161 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~va 203 (204)
T TIGR01484 161 GVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVA 203 (204)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceE
Confidence 5899999999999999999999999999999999999998765
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00017 Score=67.86 Aligned_cols=108 Identities=11% Similarity=0.080 Sum_probs=77.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.+++| |++++++|+.+...+....+.+|+.++| + .
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~v~----A------------------------------~ 486 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDRFV----A------------------------------E 486 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCceEE----c------------------------------C
Confidence 5668888888777 6899999999999999999999986432 1 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l 239 (265)
-.|+--.++++.++-.-+.+.|+||+.||..+.+.|.++.++- +|.. +..+|.+. +++..|.+.+
T Consensus 487 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 487 CKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 1234444555555544567999999999999999999876655 4432 56677766 3455555544
|
|
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=97.73 E-value=8.7e-06 Score=62.92 Aligned_cols=84 Identities=23% Similarity=0.225 Sum_probs=57.9
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCC-ccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGL-EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~-~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
.+...||+.++|+.+. +.++|.|.+....+..+++.+.. ..+|+.+++.+.....
T Consensus 34 ~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~---------------------- 91 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFD---------------------- 91 (159)
T ss_dssp EEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEE----------------------
T ss_pred eEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhcccccccccccccccc----------------------
Confidence 3456799999999884 89999999999999999999987 4678888877644221
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 204 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~ 204 (265)
+. . . .+-++.+|-+++++++|+|++.-..
T Consensus 92 -~~-~-~-~KdL~~l~~~~~~vvivDD~~~~~~ 120 (159)
T PF03031_consen 92 -KG-S-Y-IKDLSKLGRDLDNVVIVDDSPRKWA 120 (159)
T ss_dssp -TT-E-E-E--GGGSSS-GGGEEEEES-GGGGT
T ss_pred -cc-c-c-ccchHHHhhccccEEEEeCCHHHee
Confidence 10 0 0 1345555778899999999997543
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00012 Score=56.24 Aligned_cols=78 Identities=18% Similarity=0.182 Sum_probs=50.5
Q ss_pred cCCCcEEEEeCCChhHHHH----HHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHH--H
Q 024578 108 SMPQRKIIFTNADQKHAME----VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIE--T 181 (265)
Q Consensus 108 ~l~~~~~i~s~~~~~~~~~----~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~--~ 181 (265)
+-|..++.+|+.....+.. +.+.+.+......++.++ ||++.-+. .
T Consensus 128 ~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd----------------------------k~k~~qy~Kt~ 179 (237)
T COG3700 128 RRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD----------------------------KPKPGQYTKTQ 179 (237)
T ss_pred hcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC----------------------------CCCcccccccH
Confidence 3468899999876554333 333444544444455555 44443332 3
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
.+..-++ -++.|||-+||.+|+++|++.+-+-
T Consensus 180 ~i~~~~~----~IhYGDSD~Di~AAkeaG~RgIRil 211 (237)
T COG3700 180 WIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred HHHhcCc----eEEecCCchhhhHHHhcCccceeEE
Confidence 4555555 4899999999999999999888663
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00032 Score=66.01 Aligned_cols=109 Identities=11% Similarity=0.127 Sum_probs=75.4
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+....+.+|++++| +.- . ..
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~v~----a~~--~------------------------Pe 495 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFI----AEA--T------------------------PE 495 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCEEE----cCC--C------------------------HH
Confidence 5568888888777 6899999999999999999999986432 211 0 12
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l~ 240 (265)
.|.+.++.+.+ ..+.+.|+||+.||..+.+.+++..++- .+.. +..+|.+.- ++..+.+.++
T Consensus 496 dK~~~v~~lq~----~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 496 DKIALIRQEQA----EGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHHHHHHHHHH----cCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 33445544433 3357999999999999999999876654 4332 455666653 4555555443
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00019 Score=70.79 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=87.0
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.....+..+.+.+|+...-..++.+.+.....++ .-.....+..+++.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~-------el~~~i~~~~Vfar 651 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYE-------EMDPILPKLRVLAR 651 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHH-------HHHHHhccCeEEEE
Confidence 4557888777766 6999999999999999999999986432345554433211000 00001111122234
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCceec--CHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v~--~~~el~~~l 239 (265)
-.|+--.++.+.+.-.-+.+.|+|||.||..+.++|.++.++-.++. .+..||+++. ++..+...+
T Consensus 652 ~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 652 SSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 44554455555554445679999999999999999998766542433 2667889887 666666655
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00056 Score=64.53 Aligned_cols=110 Identities=11% Similarity=0.164 Sum_probs=78.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.| |++++++|+.+...+....+.+|++++ ++ .
T Consensus 445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~v----~A------------------------------~ 490 (679)
T PRK01122 445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDF----LA------------------------------E 490 (679)
T ss_pred cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcEE----Ec------------------------------c
Confidence 4568888887777 689999999999999999999998642 22 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAIPE 241 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l~~ 241 (265)
-.|+--.+++++++-.-+-+.|+||+.||..+.+.|.++.++- +|.. +..+|.+.- ++..|.+.++.
T Consensus 491 ~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~ 561 (679)
T PRK01122 491 ATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEI 561 (679)
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHH
Confidence 1233333445555444466999999999999999999876665 4433 566777664 46666665543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00027 Score=68.97 Aligned_cols=133 Identities=11% Similarity=0.134 Sum_probs=84.0
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+....+.+|+.. +.++.+.+....+. ..-.....+..++..
T Consensus 515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~~-------~el~~~~~~~~vfAr 585 (867)
T TIGR01524 515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELSD-------EELARELRKYHIFAR 585 (867)
T ss_pred CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCCH-------HHHHHHhhhCeEEEE
Confidence 4557888877776 68999999999999999999999852 23444433221100 000001111122234
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
-.|+--.++.+.+.-.-+.+.|+||+.||..+.+.|.++.++. ++.. +..+|.++- ++..+...+
T Consensus 586 ~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 586 LTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGV 654 (867)
T ss_pred CCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHH
Confidence 4455555555555545567999999999999999999976655 4432 667888774 455554444
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00026 Score=70.27 Aligned_cols=136 Identities=11% Similarity=0.040 Sum_probs=85.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc----------ceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF----------EGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f----------d~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
++.|++.+.++.+ |++++++|+.....+..+.+.+|+.... ..++++.+...... ..-.-
T Consensus 646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~-------~~l~~ 718 (1053)
T TIGR01523 646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSD-------EEVDD 718 (1053)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhcCH-------HHHHH
Confidence 4567777777766 6999999999999999999999985321 13444433221100 00000
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCceecC--HhHHHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v~~--~~el~~~l 239 (265)
......+++.-.|+--..+.+.+.-..+.+.|+||+.||..+.+.|.++.++-.++. .+..+|+++.+ +..+...+
T Consensus 719 ~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i 798 (1053)
T TIGR01523 719 LKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAI 798 (1053)
T ss_pred HhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHH
Confidence 011112333445555555566555455679999999999999999998766532333 26678888865 66666654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00029 Score=68.90 Aligned_cols=133 Identities=16% Similarity=0.179 Sum_probs=86.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+|.|++.+.++.| |++++++|+.+...+..+.+.+|+.. +.++++.+....+ -..-.....+..++.+
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~-------~~el~~~~~~~~VfAr 620 (902)
T PRK10517 550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLS-------DDELANLAERTTLFAR 620 (902)
T ss_pred cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCC-------HHHHHHHHhhCcEEEE
Confidence 4457888877766 68999999999999999999999852 3455554432110 0000001111122334
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
-.|+--.++.+.+.-..+.+.|+||+.||..+.+.|.++.++- ++.. +..+|.++- ++..+.+.+
T Consensus 621 ~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai 689 (902)
T PRK10517 621 LTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGV 689 (902)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHH
Confidence 5565556666666555577999999999999999999876665 4432 677888874 455555444
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00046 Score=65.30 Aligned_cols=109 Identities=17% Similarity=0.301 Sum_probs=74.8
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|+..+.++.| |++++++|+.+....+.+.+.+|+++++-.+.. .
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~AellP------------------------------e 586 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELLP------------------------------E 586 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCCc------------------------------H
Confidence 5567777776666 688999999999999999999998655433221 2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-CCCCCCCceecC--HhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-VPVPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~~~~~a~~~v~~--~~el~~~l 239 (265)
-|.+.+ +++.-.-+.+.||||+.||-.+...+.++.++-... -....+|.++-+ +..+.+.+
T Consensus 587 dK~~~V----~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai 651 (713)
T COG2217 587 DKAEIV----RELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAI 651 (713)
T ss_pred HHHHHH----HHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHH
Confidence 233444 444333367999999999999999998865555422 225567776543 55555433
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.00072 Score=66.28 Aligned_cols=134 Identities=12% Similarity=0.121 Sum_probs=87.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+.. +.++++.+....+ -..-.....+..++..
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~-------~~el~~~v~~~~VfAr 620 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMD-------DAALAREVEERTVFAK 620 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCC-------HHHHHHHhhhCCEEEE
Confidence 4557888887776 68999999999999999999999852 2344444332110 0000001111123334
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
-.|+--.++.+.+.-.-+.+.|+||+.||..+.+.|.++.++- +|.. +..||.++ +++..+...+.
T Consensus 621 ~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 621 LTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred eCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHH
Confidence 5566666666666555577999999999999999999876554 4432 67788887 45665555443
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0043 Score=49.83 Aligned_cols=149 Identities=13% Similarity=0.147 Sum_probs=82.4
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccc--cceeeecCCCCCCCCCC-----CCCCCcc-----
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPA-----DNTDGIE----- 160 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~--fd~i~~~~~~~~~~~~~-----~~~~~~~----- 160 (265)
..++.||+.+.++.++ .+-+|+|.....+++......|+... ...-..-+++..+ +.+ +.++...
T Consensus 81 sa~lvPgA~etm~~l~~~~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~P-eeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 81 SAKLVPGAEETMATLQERWTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVP-EEEREELLSIIDVIASLSGE 159 (315)
T ss_pred hcccCCChHHHHHHHhccCCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCC-hHHHHHHHHhcCccccccHH
Confidence 3678999999999996 46789999989999999998886421 1111111112222 111 1222111
Q ss_pred -----------------cCcCCcCcccCCC-CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc-Cce--EEEE-CC
Q 024578 161 -----------------NNSFSSNQRILCK-PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA-GLH--TVIV-GS 218 (265)
Q Consensus 161 -----------------~~~~~~~~~~~~k-p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a-G~~--~i~~-~~ 218 (265)
-+-++...-.+|- -|..+++..++.-+++. ..++||||.+|++|.+.+ |-+ .+.+ .+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~-sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDF-SAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCc-ceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1112222222222 33455555555555554 489999999999999886 222 2223 33
Q ss_pred CCCCCCCCcee--cCHhHHHHHHHHHhcC
Q 024578 219 SVPVPPADHAL--NSIHNIKEAIPEIWEG 245 (265)
Q Consensus 219 ~~~~~~a~~~v--~~~~el~~~l~~~~~~ 245 (265)
.+.-+.||..+ ++...+..+|.-+++.
T Consensus 239 eYal~eAdVAvisp~~~a~~pvielf~e~ 267 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIELFMER 267 (315)
T ss_pred cccccccceEEeccchhhhhHHHHHHHHH
Confidence 34445555544 4445555555555443
|
|
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0011 Score=53.19 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=84.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCC-------ccccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGL-------EDCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~-------~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
+.++++..+++.. +++++|.|+++....+.++..-+- ..|||. .++.
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt-----~iG~------------------ 179 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDT-----TIGL------------------ 179 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhc-----cccc------------------
Confidence 6678888888876 589999999998888777665432 233343 2222
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCC------CCceecCHhHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ADHALNSIHNIK 236 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~------a~~~v~~~~el~ 236 (265)
|-....|..+.+..|.++.+++|..|-+....+|+.+|+.+..+.++.+.+. .-.++.++..|.
T Consensus 180 ------K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l~ 249 (254)
T KOG2630|consen 180 ------KVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEILE 249 (254)
T ss_pred ------eehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhhh
Confidence 7778899999999999999999999999999999999999999877655211 234566666554
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00053 Score=66.03 Aligned_cols=138 Identities=15% Similarity=0.090 Sum_probs=82.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+..+.+.+|+... ++++++.....+.+ ..+.+.-.....+..++.+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRD-DLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchh-hCCHHHHHHHHHhCCEEEe
Confidence 5568888877766 689999999999999999999998642 22222221100000 0000000000111112234
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l 239 (265)
-.|+--..+.+.+.-.-+.+.|+||+.||..+.+.|.++.++- ++.. +..||.++-+ +..+...+
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai 586 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAI 586 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHH
Confidence 4455555666666555678999999999999999999876654 4432 5667776643 44444433
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00067 Score=52.24 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=60.5
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCc-ccc-ceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~-~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.+.++||+.++|+.+. +.++|+|++....+..+++.++.. .+| +.+++.++....
T Consensus 56 ~v~~rPgv~efL~~l~~~yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~~~--------------------- 114 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKLYEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISRDESGSP--------------------- 114 (156)
T ss_pred EEEECCCHHHHHHHHHhhcEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEeccCCCC---------------------
Confidence 4678899999999983 789999999999999999999988 478 556666543211
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARN 202 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~D 202 (265)
..| .+-..++.+.+.++.|+|++.-
T Consensus 115 ~~K-------dL~~i~~~d~~~vvivDd~~~~ 139 (156)
T TIGR02250 115 HTK-------SLLRLFPADESMVVIIDDREDV 139 (156)
T ss_pred ccc-------cHHHHcCCCcccEEEEeCCHHH
Confidence 012 1223457788999999999853
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0006 Score=66.95 Aligned_cols=127 Identities=13% Similarity=0.131 Sum_probs=84.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
+|.|++.+.++.| |+++.++|+.....+....+.+|+...- +.++.+.+.....++ .---.+.+..++
T Consensus 547 ppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~-------el~~~~~~~~Vf 619 (917)
T COG0474 547 PPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDE-------ELAELVEELSVF 619 (917)
T ss_pred CCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHH-------HHHHHhhhCcEE
Confidence 5667777777666 7999999999999999999999977544 336666554332000 000111122233
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN 230 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~ 230 (265)
++-.|+--.++.+.+.-.-+-+.|+|||.||..+.+.|.++..+...|.. +..+|.+..
T Consensus 620 ARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 620 ARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred EEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEee
Confidence 45556666666666655567899999999999999999998777765543 445655443
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00067 Score=65.17 Aligned_cols=70 Identities=11% Similarity=0.034 Sum_probs=56.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..+++.+++ +++++.++++||+.||..|.+.++.....+..+..+..|++++++.+++.++|+.+.
T Consensus 655 ~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~ 724 (726)
T PRK14501 655 GVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPGESRARYRLPSQREVRELLRRLL 724 (726)
T ss_pred CCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECCCCCcceEeCCCHHHHHHHHHHHh
Confidence 4678999999998 778899999999999999999974323334334456789999999999999888775
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0013 Score=57.84 Aligned_cols=71 Identities=15% Similarity=0.129 Sum_probs=58.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCc---EEEEcCChhcHHHHHH-----cCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKK---TIFFDDSARNIASAKA-----AGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~---~i~vGD~~~Di~~a~~-----aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..+++.+++.++++..+ .++|||..||..|.+. .|+ .|.+.++...-.|.+.+.+..++.++|..+.
T Consensus 299 g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~-~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~ 377 (384)
T PLN02580 299 DWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGY-GILVSSVPKESNAFYSLRDPSEVMEFLKSLV 377 (384)
T ss_pred CCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCce-EEEEecCCCCccceEEcCCHHHHHHHHHHHH
Confidence 357899999999999987663 3899999999999986 354 4566665556678999999999999998875
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.00076 Score=63.48 Aligned_cols=134 Identities=12% Similarity=0.121 Sum_probs=89.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccc----eeeecCCCCCCCCCCCCCCCcc---cCcCCc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE----GIICFETINPRLQPADNTDGIE---NNSFSS 166 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd----~i~~~~~~~~~~~~~~~~~~~~---~~~~~~ 166 (265)
+|.|++.+.++.+ |+++..+|+.+...+....++.|+...-+ ..+++.+ ||-.. ..-.+.
T Consensus 584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~e----------fD~ls~~~~~~~~~ 653 (972)
T KOG0202|consen 584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSE----------FDDLSDEELDDAVR 653 (972)
T ss_pred CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhh----------hhcCCHHHHHHHhh
Confidence 6678888877766 79999999999999999999999654433 2333332 22222 112223
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhHHHHHHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~el~~~l~~ 241 (265)
...++.+-.|.--.++.+.|+-..+-+.|-||+.||-.+.+.|.++.++--+|.. +..+|.+..+ +++..++..
T Consensus 654 ~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~D-DnFstIvaA 729 (972)
T KOG0202|consen 654 RVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLAD-DNFSTIVAA 729 (972)
T ss_pred cceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEec-CcHHHHHHH
Confidence 3333334445555566666666667789999999999999999998777755543 6677877765 444444433
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0019 Score=64.14 Aligned_cols=136 Identities=10% Similarity=0.078 Sum_probs=84.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc-cc-----------------------eeeecCCCCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC-FE-----------------------GIICFETINPR 149 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~-fd-----------------------~i~~~~~~~~~ 149 (265)
++.|++.+.++.+ |++++++|+.....+....+.+|+-.. .+ .++.+.+....
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l 647 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM 647 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhC
Confidence 4457887777766 689999999999999999999987421 00 12222222110
Q ss_pred CCCCCCCCCcccCcCCc--CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCC
Q 024578 150 LQPADNTDGIENNSFSS--NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPA 225 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~--~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a 225 (265)
.++ .-..... ...++++-.|+--.++.+.+.-..+.+.++||+.||+.+.+.|.++.++-..|. .+..|
T Consensus 648 ~~~-------el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aA 720 (997)
T TIGR01106 648 TSE-------QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 720 (997)
T ss_pred CHH-------HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhh
Confidence 000 0000000 011344555655555666655455679999999999999999998766543333 26678
Q ss_pred CceecC--HhHHHHHH
Q 024578 226 DHALNS--IHNIKEAI 239 (265)
Q Consensus 226 ~~~v~~--~~el~~~l 239 (265)
|+++.+ +..+.+.+
T Consensus 721 DivL~dd~f~~Iv~ai 736 (997)
T TIGR01106 721 DMILLDDNFASIVTGV 736 (997)
T ss_pred ceEEecCCHHHHHHHH
Confidence 888876 65555544
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0021 Score=47.48 Aligned_cols=45 Identities=11% Similarity=0.109 Sum_probs=29.0
Q ss_pred CChhHHHHHhc---CCCcEEEEeCCChh---------------HHHHHHhHhCCccccceeeecC
Q 024578 98 PDPVLRNLLLS---MPQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 98 ~~p~~~~~l~~---l~~~~~i~s~~~~~---------------~~~~~l~~~~~~~~fd~i~~~~ 144 (265)
+.+++.+.++. .+..++++|+.+.. .+..+|.++++. +|.++.+-
T Consensus 25 ~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~~k 87 (126)
T TIGR01689 25 PILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYVGK 87 (126)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEeCC
Confidence 44555666643 35778888877554 455677777766 67777654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0099 Score=52.94 Aligned_cols=82 Identities=20% Similarity=0.165 Sum_probs=61.3
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHH
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 185 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 185 (265)
|..-|.-++|+|-++...++.++..+. +.++.-+++... .+-.-||.+-++.++++
T Consensus 267 l~kqGVlLav~SKN~~~da~evF~khp-----~MiLkeedfa~~-------------------~iNW~~K~eNirkIAkk 322 (574)
T COG3882 267 LKKQGVLLAVCSKNTEKDAKEVFRKHP-----DMILKEEDFAVF-------------------QINWDPKAENIRKIAKK 322 (574)
T ss_pred HHhccEEEEEecCCchhhHHHHHhhCC-----CeEeeHhhhhhh-------------------eecCCcchhhHHHHHHH
Confidence 344467788999999999999988874 233333322210 01137999999999999
Q ss_pred cCCCCCcEEEEcCChhcHHHHHHcCc
Q 024578 186 ANVDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 186 lg~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
+++..+.++|++|++..-+-.+.-+-
T Consensus 323 lNlg~dSmvFiDD~p~ErE~vk~~~~ 348 (574)
T COG3882 323 LNLGLDSMVFIDDNPAERELVKRELP 348 (574)
T ss_pred hCCCccceEEecCCHHHHHHHHhcCc
Confidence 99999999999999988888877764
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0034 Score=50.00 Aligned_cols=38 Identities=21% Similarity=0.243 Sum_probs=33.0
Q ss_pred CCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCc
Q 024578 97 KPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLE 134 (265)
Q Consensus 97 ~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~ 134 (265)
...|++.++|+.+ .+.++|.|.+...++..++..+++.
T Consensus 45 ~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~~~ 84 (195)
T TIGR02245 45 LMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELGVL 84 (195)
T ss_pred EeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhccc
Confidence 3568999999988 4889999999999999999988753
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.011 Score=49.19 Aligned_cols=99 Identities=19% Similarity=0.194 Sum_probs=62.5
Q ss_pred HHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc-----cCcCCcCc-ccCCCCC-HH
Q 024578 105 LLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE-----NNSFSSNQ-RILCKPS-LE 177 (265)
Q Consensus 105 ~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~kp~-~~ 177 (265)
-|+..+..+++=|-|+.+++...++.+++..+||.+++++............|-.+ ..++.... ...+-|| |.
T Consensus 153 ~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPr 232 (297)
T PF05152_consen 153 ELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPR 232 (297)
T ss_pred HHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCe
Confidence 34444567889999999999999999999999999999874433211111222222 22222222 1122344 67
Q ss_pred HHHHHHHHcCCCC-CcEEEEcCCh-hcH
Q 024578 178 AIETAIRIANVDP-KKTIFFDDSA-RNI 203 (265)
Q Consensus 178 ~~~~~~~~lg~~~-~~~i~vGD~~-~Di 203 (265)
.....+++.|+.. +.+-.|+|=. ||+
T Consensus 233 VVL~yL~k~gvny~KtiTLVDDL~~Nn~ 260 (297)
T PF05152_consen 233 VVLWYLRKKGVNYFKTITLVDDLKSNNY 260 (297)
T ss_pred ehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 7778899999863 4556677766 555
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0064 Score=52.38 Aligned_cols=87 Identities=17% Similarity=0.137 Sum_probs=61.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHH---HHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHA---MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~---~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.++||+.++++.+ +.+++++||++.... ...++.+|+...++.|+++.
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~-------------------------- 97 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSS-------------------------- 97 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehH--------------------------
Confidence 3568888887766 688999999884443 34456778766666666543
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEE
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI 215 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~ 215 (265)
......++..+......++++++..+...++.+|+.++.
T Consensus 98 ------~~~~~~l~~~~~~~~~~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 98 ------FAAAAYLKSINFPKDKKVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred ------HHHHHHHHhhccCCCCEEEEEcCHHHHHHHHHCCCEEec
Confidence 244456666666555568888888999999999997654
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.024 Score=45.49 Aligned_cols=42 Identities=12% Similarity=-0.001 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHcC-CCCC-cEEEEcCChhcHHHHHHcCceEEEEC
Q 024578 175 SLEAIETAIRIAN-VDPK-KTIFFDDSARNIASAKAAGLHTVIVG 217 (265)
Q Consensus 175 ~~~~~~~~~~~lg-~~~~-~~i~vGD~~~Di~~a~~aG~~~i~~~ 217 (265)
|..+.+.+++.+. ..+. -++.+|||+||+.+. +++...+.|.
T Consensus 192 Kg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~-ev~d~AfiV~ 235 (274)
T COG3769 192 KGQAANWLLETYRRLGGARTTLGLGDGPNDAPLL-EVMDYAFIVK 235 (274)
T ss_pred ccHHHHHHHHHHHhcCceeEEEecCCCCCcccHH-Hhhhhheeec
Confidence 3445555665542 2333 489999999999988 4555555554
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.01 Score=56.59 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=67.4
Q ss_pred CCChhHHHH---HhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNL---LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~---l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
.+.|++... |++++++++++|+.+...++...+..| ++.|++.- . ..
T Consensus 723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev--~------------------------P~ 772 (951)
T KOG0207|consen 723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV--L------------------------PE 772 (951)
T ss_pred ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc--C------------------------ch
Confidence 344666555 455579999999999999999999998 55666532 0 12
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCcee
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHAL 229 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v 229 (265)
-|.+.++++.+. ...+.||||+.||-.+...+.++.++..... ....+|.+.
T Consensus 773 ~K~~~Ik~lq~~----~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVL 825 (951)
T KOG0207|consen 773 QKAEKIKEIQKN----GGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVL 825 (951)
T ss_pred hhHHHHHHHHhc----CCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEE
Confidence 234455555443 3669999999999988888877655554432 245566644
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.02 Score=57.37 Aligned_cols=144 Identities=15% Similarity=0.138 Sum_probs=83.7
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCC----------CCC---------C
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRL----------QPA---------D 154 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~----------~~~---------~ 154 (265)
++.|++.+.++.+ +++++++|+.+...+..+.+.+|+-..-+.++..+...... .+. -
T Consensus 656 ~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 735 (1054)
T TIGR01657 656 PLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEI 735 (1054)
T ss_pred CCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccc
Confidence 4567777777666 69999999999999999999999853222222211000000 000 0
Q ss_pred CC---------------CCcccC---------------cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHH
Q 024578 155 NT---------------DGIENN---------------SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIA 204 (265)
Q Consensus 155 ~~---------------~~~~~~---------------~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~ 204 (265)
.. +..-.+ -.+.+..++.+-.|+--..+.+.+.-...-+.|+|||.||..
T Consensus 736 ~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ 815 (1054)
T TIGR01657 736 PYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCG 815 (1054)
T ss_pred cCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 00 000000 011122344455555555666666555567999999999999
Q ss_pred HHHHcCceEEEECCCCCCCCCCcee--cCHhHHHHHHHH
Q 024578 205 SAKAAGLHTVIVGSSVPVPPADHAL--NSIHNIKEAIPE 241 (265)
Q Consensus 205 ~a~~aG~~~i~~~~~~~~~~a~~~v--~~~~el~~~l~~ 241 (265)
+.+.|.++.++... +....|+++. +++.-+..++.+
T Consensus 816 ALK~AdVGIam~~~-das~AA~f~l~~~~~~~I~~~I~e 853 (1054)
T TIGR01657 816 ALKQADVGISLSEA-EASVAAPFTSKLASISCVPNVIRE 853 (1054)
T ss_pred HHHhcCcceeeccc-cceeecccccCCCcHHHHHHHHHH
Confidence 99999887665433 3344566663 456656555543
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0055 Score=59.61 Aligned_cols=74 Identities=8% Similarity=-0.020 Sum_probs=58.5
Q ss_pred CCCCHHHHHHHHHH---cCCCCCcEEEEcCChhcHHHHHHcCce-----------EEEECCCCCCCCCCceecCHhHHHH
Q 024578 172 CKPSLEAIETAIRI---ANVDPKKTIFFDDSARNIASAKAAGLH-----------TVIVGSSVPVPPADHALNSIHNIKE 237 (265)
Q Consensus 172 ~kp~~~~~~~~~~~---lg~~~~~~i~vGD~~~Di~~a~~aG~~-----------~i~~~~~~~~~~a~~~v~~~~el~~ 237 (265)
+-.|+.+++.+++. +|.+++.+++|||+.||..|.+.++-. .+.+.-|...-.|.+.+++.+|+.+
T Consensus 760 gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~ 839 (854)
T PLN02205 760 GVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVR 839 (854)
T ss_pred CCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECCCCccCeEecCCHHHHHH
Confidence 46788999999754 689999999999999999999988621 1333334456678899999999999
Q ss_pred HHHHHhcC
Q 024578 238 AIPEIWEG 245 (265)
Q Consensus 238 ~l~~~~~~ 245 (265)
+|..+.+.
T Consensus 840 lL~~L~~~ 847 (854)
T PLN02205 840 LMQGLASV 847 (854)
T ss_pred HHHHHHhc
Confidence 99888753
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.011 Score=59.20 Aligned_cols=49 Identities=16% Similarity=0.254 Sum_probs=38.9
Q ss_pred CCcEEEEcCChhcHHHHHHcCceEEEECCCC---CCCCCCceecCHhHHHHHH
Q 024578 190 PKKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEAI 239 (265)
Q Consensus 190 ~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~---~~~~a~~~v~~~~el~~~l 239 (265)
...+.++|||.||+.|.++|.++. ++...+ ....+|+++.++..|.++|
T Consensus 768 ~~~vl~iGDG~ND~~mlk~AdVGI-gi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 768 GKTTLAIGDGANDVSMIQEADVGV-GISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred CCeEEEEeCCCccHHHHhhcCeee-EecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 467999999999999999998765 554433 2557999999988887766
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.011 Score=52.24 Aligned_cols=114 Identities=20% Similarity=0.204 Sum_probs=83.0
Q ss_pred hHHHHHHHhccccCCCCCCChh--HHHHHhcC---CCcEEEEeCC--ChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPV--LRNLLLSM---PQRKIIFTNA--DQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~--~~~~l~~l---~~~~~i~s~~--~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
+..+.+...-+...++..++|. ..++++.+ +.+++++|+. +...++..|..+|.+-+--.++.+.+....
T Consensus 80 p~~f~~~~~lEI~tEKevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S~e~rl~--- 156 (635)
T COG5610 80 PLSFQELMKLEINTEKEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMSSEFRLK--- 156 (635)
T ss_pred cHHHHHHhceeeccceeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeecceeehh---
Confidence 4455554443333444445543 44566655 4788999996 455677888888876443346777766653
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEE
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIV 216 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~ 216 (265)
|.....+..+++.-+++|.+.+.|||+. .|+.+++..|+.+.+.
T Consensus 157 --------------------KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 157 --------------------KNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred --------------------cccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 8889999999999999999999999999 5999999999977654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.032 Score=51.32 Aligned_cols=94 Identities=14% Similarity=0.139 Sum_probs=65.3
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ +.+++++|+..........+.+|+ + + .
T Consensus 347 ~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~-~-----------------------------~ 389 (499)
T TIGR01494 347 PLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------F-A-----------------------------R 389 (499)
T ss_pred CCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------e-e-----------------------------c
Confidence 5567777776665 688999999999999999999885 1 1 1
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecC
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 231 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~ 231 (265)
-.|+.-..+++.+.-....+.++||+.||..+.+.+++...+. ....+|.++.+
T Consensus 390 ~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~----a~~~adivl~~ 443 (499)
T TIGR01494 390 VTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG----AKAAADIVLLD 443 (499)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc----hHHhCCeEEec
Confidence 1122222344443333367999999999999999998764443 34567887765
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.07 Score=48.32 Aligned_cols=97 Identities=9% Similarity=0.003 Sum_probs=55.6
Q ss_pred ChhHHHHHhcCCCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHH
Q 024578 99 DPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 177 (265)
Q Consensus 99 ~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~ 177 (265)
.|...+.....+ +.+|+|..+..+++..++. +| +|.|++.+..-. +...-.|... ++...+
T Consensus 98 ~~e~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG----~D~VvGTEL~v~--------~~G~~TG~~~-----G~n~~e 159 (498)
T PLN02499 98 DMEAWKVFSSCD-KRVVVTRMPRVMVERFAKEHLR----ADEVIGSELVVN--------RFGFATGFIR-----GTDVDQ 159 (498)
T ss_pred CHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcC----CceEEeeeEEEe--------eccEEEEEEe-----cCccHH
Confidence 355667777766 9999999999999999998 65 455554431100 0000111111 233333
Q ss_pred H-HHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 178 A-IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 178 ~-~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
. .+.+.+.+| +....+-+||+..|-.-..-+. -.++
T Consensus 160 k~~~rl~~~~g-~~~~~vg~~~~~~~~~f~~~ck--~~~~ 196 (498)
T PLN02499 160 SVANRVANLFV-DERPQLGLGRISASSSFLSLCK--EQIH 196 (498)
T ss_pred HHHHHHHHHhC-ccCceecccCCcccchhhhhCc--eEEe
Confidence 3 445555566 3345788888887755555443 4444
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.019 Score=57.84 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=39.9
Q ss_pred CcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHHHHH
Q 024578 191 KKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 191 ~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~~l~ 240 (265)
.-+++||||.||+.|.++|.++. ++...+. ...+|+.+..+.-|.++|-
T Consensus 872 ~vtlaIGDGaNDv~mIq~AdVGI-GIsG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 872 DMTLAIGDGANDVSMIQMADVGV-GISGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred cEEEEECCCcchHHHHHhcCeee-eecCchhHHHHHhhccchhhhHHHHHHHH
Confidence 56899999999999999998754 6554442 5679999999999888764
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.05 Score=44.39 Aligned_cols=79 Identities=11% Similarity=0.047 Sum_probs=60.3
Q ss_pred EEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCC
Q 024578 114 IIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191 (265)
Q Consensus 114 ~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 191 (265)
++||++..--....+-.++++..| +.|+++.. ..|...++++.+++|-+.-
T Consensus 179 vLVTs~qLVPaLaKcLLy~L~~~f~ieNIYSa~k---------------------------vGK~~cFe~I~~Rfg~p~~ 231 (274)
T TIGR01658 179 VLVTSGQLIPSLAKCLLFRLDTIFRIENVYSSIK---------------------------VGKLQCFKWIKERFGHPKV 231 (274)
T ss_pred EEEEcCccHHHHHHHHHhccCCccccccccchhh---------------------------cchHHHHHHHHHHhCCCCc
Confidence 577777655444444455666555 55666654 3458899999999999788
Q ss_pred cEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 192 KTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 192 ~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
..++|||+...=.+|+..+|.++-++..
T Consensus 232 ~f~~IGDG~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 232 RFCAIGDGWEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred eEEEeCCChhHHHHHHhcCCCeEEeecC
Confidence 9999999999999999999999888654
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.031 Score=46.00 Aligned_cols=116 Identities=13% Similarity=0.066 Sum_probs=59.5
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
..+.+.+...+ ..+.+.+|+.++++.| ++|+.|+|.|-...++.++++.+....=-.|+++.-.
T Consensus 76 ~k~~i~~~V~~----s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~--------- 142 (246)
T PF05822_consen 76 TKSEIEEAVKE----SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMD--------- 142 (246)
T ss_dssp BGGGHHHHHHC----S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EE---------
T ss_pred CHHHHHHHHHh----cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEE---------
Confidence 35566666654 4567888888888777 5899999999999999999998644221223433211
Q ss_pred CCCcc--cCcCCcCcccCCCCCHHHHH--HHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 156 TDGIE--NNSFSSNQRILCKPSLEAIE--TAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 156 ~~~~~--~~~~~~~~~~~~kp~~~~~~--~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
||-.+ .++.-+-++...|... .+. ...+.+. ...+++..||+..|+.|+..+
T Consensus 143 Fd~~g~l~gF~~~lIH~~NKn~~-~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 143 FDEDGVLVGFKGPLIHTFNKNES-ALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp E-TTSBEEEE-SS---TT-HHHH-HHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred ECCcceEeecCCCceEEeeCCcc-cccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence 11100 1111111122233322 221 1122222 457899999999999998766
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.12 Score=45.25 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=55.5
Q ss_pred CCCHHHHHHHHHHcCCCC---CcEEEEcCChhcHHHHHHcC----ceEEEECCCCCCCCCCceecCHhHHHHHHHHHhc
Q 024578 173 KPSLEAIETAIRIANVDP---KKTIFFDDSARNIASAKAAG----LHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~---~~~i~vGD~~~Di~~a~~aG----~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
-.|+.+++.+++.++... .-.+|+||..+|-.+++.+. -..|.|......-.|.+.+.+..++.++|..+..
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~ 360 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVE 360 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 577999999999998753 35899999999977777652 2345555333456789999999999999988864
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.091 Score=45.79 Aligned_cols=71 Identities=17% Similarity=0.158 Sum_probs=54.6
Q ss_pred CCCHHHHHHHHHHcCCCCC---cEEEEcCChhcHHHHHHc-----CceEEEECCCCCCCCCCceecCHhHHHHHHHHHhc
Q 024578 173 KPSLEAIETAIRIANVDPK---KTIFFDDSARNIASAKAA-----GLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~---~~i~vGD~~~Di~~a~~a-----G~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
-.|+.+++.+++.++.... -.+|+||..+|-.+++.+ |+ .+.|..+...-.|.+.+.+.+++.++|..+..
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~-gI~Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~ 346 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGL-GILVSKYAKETNASYSLQEPDEVMEFLERLVE 346 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCc-cEEeccCCCCCcceEeCCCHHHHHHHHHHHHH
Confidence 4679999999999886532 379999999997777654 33 34555434455799999999999999988863
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.061 Score=39.97 Aligned_cols=104 Identities=17% Similarity=0.236 Sum_probs=61.5
Q ss_pred CCCCCCChhHHHHHhcC--CCcEEEEeCC--ChhHHHH----HHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 93 YEKLKPDPVLRNLLLSM--PQRKIIFTNA--DQKHAME----VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 93 ~~~~~~~p~~~~~l~~l--~~~~~i~s~~--~~~~~~~----~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
+.++...|++.++++.| .+.++|+|.. ....... +.+.+..-++=..|+|+.
T Consensus 64 FRnL~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-------------------- 123 (180)
T COG4502 64 FRNLGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-------------------- 123 (180)
T ss_pred hhhcCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC--------------------
Confidence 35677889999999998 4788888876 2222222 333333323323344443
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC-CCCCCCCCceecCHhHHHHHHHH
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS-SVPVPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~-~~~~~~a~~~v~~~~el~~~l~~ 241 (265)
|. +. .-=++|+|++..++..+ |.. +++.. ......-...+.++.|+.+.+-+
T Consensus 124 --------Kn-------iv-------kaDilIDDnp~nLE~F~--G~k-IlFdA~HN~nenRF~Rv~~W~e~eq~ll~ 176 (180)
T COG4502 124 --------KN-------IV-------KADILIDDNPLNLENFK--GNK-ILFDAHHNKNENRFVRVRDWYEAEQALLE 176 (180)
T ss_pred --------CC-------eE-------EeeEEecCCchhhhhcc--Cce-EEEecccccCccceeeeccHHHHHHHHHH
Confidence 21 11 11268999999988875 443 34433 33344555678899988865543
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.093 Score=43.92 Aligned_cols=68 Identities=19% Similarity=0.159 Sum_probs=43.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcC---ceEEEECCCCCCCCCCceecCHhHHHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAG---LHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG---~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~ 242 (265)
..|+..++++.++.+....-+++.||...|=.++..+. -.++-+..+. -.+++...........+.++
T Consensus 181 ~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~--t~a~~~~~~~~~~~~~l~~~ 251 (266)
T COG1877 181 VSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGS--TQAKFRLAGVYGFLRSLYKL 251 (266)
T ss_pred cchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhccCCCceEEecCCc--ccccccccccHHHHHHHHHH
Confidence 45789999999998887677999999999988887775 3344444332 23333333333333333333
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.39 Score=36.80 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=23.6
Q ss_pred HHHHHHHHHcC-CCCCcEEEEcCChhcHHHHHHcCc
Q 024578 177 EAIETAIRIAN-VDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 177 ~~~~~~~~~lg-~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
..++.+...+. ....=...+|.+.+|+.+=+++|+
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGi 140 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGI 140 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCC
Confidence 44444444443 222335668999999999999998
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.29 E-value=0.1 Score=49.88 Aligned_cols=137 Identities=9% Similarity=0.039 Sum_probs=83.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccc--eeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
+..||+.+.++.| |+++-.+|+.+-..++.....+|+-..=+ ..+.+.+.....+++ -.-..++..++
T Consensus 647 PvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee-------~~~i~pkl~Vl 719 (1034)
T KOG0204|consen 647 PVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEE-------RDKIWPKLRVL 719 (1034)
T ss_pred CCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHH-------HHhhhhhheee
Confidence 3458888888777 58888999999999999999998653222 222222222110000 11133444444
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEE-cCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhHHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~v-GD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~el~~~l~~~ 242 (265)
....|.--..+.+.+. ...++++| ||+.||-.+.++|.++.++--.|-. +..+|.|+-+ +.+..+++.+
T Consensus 720 ARSSP~DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~D-DNFssIVk~v 791 (1034)
T KOG0204|consen 720 ARSSPNDKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILD-DNFSSIVKAV 791 (1034)
T ss_pred ecCCCchHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEc-CchHHHHHHH
Confidence 4444433333333333 33456665 9999999999999998876654433 7788888765 5555555544
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=94.04 E-value=1.6 Score=38.19 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=34.0
Q ss_pred CCHHHHHHHHHHc----CCCCCcEEEEcCCh-----hcHHHHHHcCceEEEECCCC
Q 024578 174 PSLEAIETAIRIA----NVDPKKTIFFDDSA-----RNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 174 p~~~~~~~~~~~l----g~~~~~~i~vGD~~-----~Di~~a~~aG~~~i~~~~~~ 220 (265)
.|..+++.+.+.+ ++.+++|+.|||.. ||++ |+.++ .++|++++.
T Consensus 349 dKs~GV~~lQ~y~~~~~~i~~~~tLHVGDQF~s~GaNDfk-aR~a~-~t~WIasP~ 402 (408)
T PF06437_consen 349 DKSLGVRALQKYFDPEGGIKPSETLHVGDQFLSAGANDFK-ARLAC-TTAWIASPQ 402 (408)
T ss_pred CcHHhHHHHHHHHHhccCCCccceeeehhhhhccCCcchh-hhhhc-eeeEecCHH
Confidence 3467777777777 89999999999954 7775 44555 589998764
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.65 Score=39.02 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=37.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHH---HHHhH-hCCccccceeeecC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGR-LGLEDCFEGIICFE 144 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~---~~l~~-~~~~~~fd~i~~~~ 144 (265)
...+++||+.++|+.+ +.+++++||++...-+ ..|+. .+++...+.|+++.
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~ 78 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSG 78 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHH
Confidence 5568899999999877 5899999998766444 44555 55656677788765
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=93.65 E-value=0.058 Score=43.17 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=20.8
Q ss_pred EEEEecCCCccCCc-ccHHHHHHHHHHH
Q 024578 14 CLLFDLDDTLYPLS-TGFNLACRRNIEE 40 (265)
Q Consensus 14 ~iiFDlDGTLld~~-~~~~~~~~~~~~~ 40 (265)
+++||+||||+++. ..+.....+++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~ 28 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALER 28 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHH
Confidence 47899999999865 5666777776666
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.54 E-value=0.22 Score=46.74 Aligned_cols=128 Identities=8% Similarity=0.100 Sum_probs=73.8
Q ss_pred CChhHHHHHhcCC---CcEEEEeCCChhHHHHHHhHh--CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 98 PDPVLRNLLLSMP---QRKIIFTNADQKHAMEVLGRL--GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 98 ~~p~~~~~l~~l~---~~~~i~s~~~~~~~~~~l~~~--~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
-..++..-|..++ ....++++.+.+......+.- .+......++++.-..
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctP------------------------- 766 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTP------------------------- 766 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecCh-------------------------
Confidence 3456666666664 334566776666655544432 1222234445433110
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHHHHHHHhcCChhh
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAIPEIWEGEGEQ 249 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~~l~~~~~~~~~~ 249 (265)
.-|..+.+.+.++-| ..+.+|||+-||+.|.++|.++ +++...+. .-.||+-++.+.-+.++|.-.=-..+++
T Consensus 767 tQKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~A~~G-iGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkr 842 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQAADVG-IGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKR 842 (1051)
T ss_pred hHHHHHHHHHHHhhC---ceEEEEcCCCccchheeecccc-eeeecccccccchhccccHHHHHHHHHHhhccccchHHH
Confidence 223445554555545 6799999999999999988764 44433332 4568998888888887664332234455
Q ss_pred hhhhc
Q 024578 250 LEQVI 254 (265)
Q Consensus 250 ~~~~~ 254 (265)
+..+.
T Consensus 843 sa~la 847 (1051)
T KOG0210|consen 843 SAKLA 847 (1051)
T ss_pred HHHHH
Confidence 44443
|
|
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.38 E-value=2.2 Score=37.63 Aligned_cols=117 Identities=17% Similarity=0.105 Sum_probs=70.0
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCCCC---CCCCCCCCCcc---cCcCCcCc-ccC
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPR---LQPADNTDGIE---NNSFSSNQ-RIL 171 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~-~~~ 171 (265)
....++..|.++.+.||............+ +...+||.++....-... ...-+..+... ..+.+..+ -+.
T Consensus 206 ~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~~~p~e~~ 285 (424)
T KOG2469|consen 206 LLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDNTGPLEQG 285 (424)
T ss_pred chHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeeccccccccccccCCcchhc
Confidence 445556667788999998877777666653 344678887765311000 00000111111 11111111 233
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChh-c-HHHHHHcCceEEEECC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSAR-N-IASAKAAGLHTVIVGS 218 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-D-i~~a~~aG~~~i~~~~ 218 (265)
+.+.+-....+.+.++....+++++||+.. | +..-+.-|+.++.+..
T Consensus 286 ~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 286 GVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred ccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 455666777788888888899999999995 6 4556778998888753
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.28 Score=44.50 Aligned_cols=85 Identities=13% Similarity=0.244 Sum_probs=63.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 174 (265)
.-||+.|-+.++ +++.+.+|+.+........+..|++++... ++|
T Consensus 448 vK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe--------------------------------atP 495 (681)
T COG2216 448 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE--------------------------------ATP 495 (681)
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc--------------------------------CCh
Confidence 348888876665 689999999999988889889998754322 243
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 175 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
+---.++++.+-.-.-+.|.||+.||..+..++.+..++.
T Consensus 496 --EdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN 535 (681)
T COG2216 496 --EDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN 535 (681)
T ss_pred --HHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc
Confidence 3334566666666677999999999999999998765544
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=92.85 E-value=0.28 Score=40.35 Aligned_cols=119 Identities=10% Similarity=0.016 Sum_probs=63.5
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHH---hcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLL---LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l---~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
+...+.+...+ ..+.+..|..+++ +...+++.|.|.+-...++.++.+-.....+-.+++..... .
T Consensus 124 ~k~~I~~~Va~----s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F-------~ 192 (298)
T KOG3128|consen 124 SKNAIDDIVAE----SNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDF-------D 192 (298)
T ss_pred CHHHHHHHHHH----hhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhh-------c
Confidence 34444444433 2333445555554 45569999999999888888877654443333333322100 0
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCC--CCCcEEEEcCChhcHHHHHHc
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANV--DPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~--~~~~~i~vGD~~~Di~~a~~a 209 (265)
+++--+++--+-+..+.|. ...++...+.+.. ...++++.||+..|+.|+..+
T Consensus 193 edg~l~gF~~~Lihtfnkn-~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv 247 (298)
T KOG3128|consen 193 EDGNLCGFSQPLIHTFNKN-SSVLQNESEYFHQLAGRVNVILLGDSIGDLHMADGV 247 (298)
T ss_pred ccchhhhhhHHHHHHHccc-hHHHHhhhHHHhhccCCceEEEeccccccchhhcCC
Confidence 0000011111111122232 3444454555532 567899999999999998765
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.92 Score=38.34 Aligned_cols=84 Identities=20% Similarity=0.212 Sum_probs=50.7
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCChh---HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
++||+.++|+.+ +.+++++||++.. .....++.+|+....+.++++.
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~--------------------------- 71 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSA--------------------------- 71 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHH---------------------------
Confidence 566777777666 5889999997643 3335667777754444454432
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
......+++.......++++|+.. ....++..|+..+
T Consensus 72 -----~~~~~~l~~~~~~~~~v~~iG~~~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 72 -----LCAARLLRQPPDAPKAVYVIGEEG-LRAELDAAGIRLA 108 (279)
T ss_pred -----HHHHHHHHhhCcCCCEEEEEcCHH-HHHHHHHCCCEEe
Confidence 233344455434456788899752 3344566777643
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.44 Score=42.10 Aligned_cols=35 Identities=11% Similarity=0.166 Sum_probs=27.3
Q ss_pred CCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhH
Q 024578 96 LKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGR 130 (265)
Q Consensus 96 ~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~ 130 (265)
..+.|++.+.|+.+ ..+++|+|+.+...+...+..
T Consensus 140 A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 140 ALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred ccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 34567788888877 367999999999988877754
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.11 E-value=0.76 Score=39.67 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=65.3
Q ss_pred hhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C--CccccceeeecCCCCCCCCCCC-CCCCcccC-c--CCcCcc
Q 024578 100 PVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G--LEDCFEGIICFETINPRLQPAD-NTDGIENN-S--FSSNQR 169 (265)
Q Consensus 100 p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~--~~~~fd~i~~~~~~~~~~~~~~-~~~~~~~~-~--~~~~~~ 169 (265)
|....+++.| |.+++++||.+..++..=...+ | ..+.||.|+.--+-..--++++ -|.--... + ...+..
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~wdkv~ 322 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLLWDKVD 322 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchhhhhhh
Confidence 5666666666 5789999999988877655543 2 2356888876321111000000 01000000 0 000000
Q ss_pred cCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHH-HcCceEEEE
Q 024578 170 ILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIV 216 (265)
Q Consensus 170 ~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~-~aG~~~i~~ 216 (265)
-+-|.| .-.+...++.-|..-.+++++||+. +|+.... ..||++..+
T Consensus 323 klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAI 374 (510)
T KOG2470|consen 323 KLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAI 374 (510)
T ss_pred hcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccc
Confidence 001111 1234566777788889999999999 6987776 789987665
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=89.26 E-value=4.3 Score=33.75 Aligned_cols=73 Identities=21% Similarity=0.282 Sum_probs=49.4
Q ss_pred CCcEEEEeCCChhH---HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHc
Q 024578 110 PQRKIIFTNADQKH---AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIA 186 (265)
Q Consensus 110 ~~~~~i~s~~~~~~---~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~l 186 (265)
.++++|||..+... +...|+.+|+. +|..+.-. |-+|.. +++.+
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFLg---------------------------G~~K~~----vL~~~ 232 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFLG---------------------------GLPKGP----VLKAF 232 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHhC---------------------------CCchhH----HHHhh
Confidence 47889999876554 44455566765 44444333 244444 45555
Q ss_pred CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 187 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 187 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+-. +|++|...-+..|. .++.+..|++|.
T Consensus 233 ~ph----IFFDDQ~~H~~~a~-~~vps~hVP~gv 261 (264)
T PF06189_consen 233 RPH----IFFDDQDGHLESAS-KVVPSGHVPYGV 261 (264)
T ss_pred CCC----EeecCchhhhhHhh-cCCCEEeccCCc
Confidence 443 89999999999997 778888888774
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.93 E-value=0.21 Score=47.69 Aligned_cols=30 Identities=13% Similarity=0.257 Sum_probs=26.9
Q ss_pred CcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 191 KKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 191 ~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
-.++|+||+.||+-+.++|.++.+..++.+
T Consensus 807 y~TLMCGDGTNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 807 YVTLMCGDGTNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred eEEEEecCCCcchhhhhhcccceehhcCCh
Confidence 468999999999999999999989888765
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.72 E-value=0.54 Score=35.61 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=30.4
Q ss_pred CCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC
Q 024578 188 VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 188 ~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~ 221 (265)
.+++|++||||.. .||-+|...|--.+|...|.+
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~ 171 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVR 171 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEeccccc
Confidence 5899999999999 799999999999999987653
|
|
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.82 E-value=2.6 Score=36.88 Aligned_cols=78 Identities=17% Similarity=0.117 Sum_probs=55.1
Q ss_pred EEEeCCChhHHHHHHhHhCCccc--cceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCC
Q 024578 114 IIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191 (265)
Q Consensus 114 ~i~s~~~~~~~~~~l~~~~~~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~ 191 (265)
+++|+...-.....+-.+|+... .+.|+++..+ .|...|+++.++||- .-
T Consensus 374 VlvTttqLipalaKvLL~gLg~~fpiENIYSa~ki---------------------------GKescFerI~~RFg~-K~ 425 (468)
T KOG3107|consen 374 VLVTTTQLIPALAKVLLYGLGSSFPIENIYSATKI---------------------------GKESCFERIQSRFGR-KV 425 (468)
T ss_pred EEEeccchhHHHHHHHHHhcCCcccchhhhhhhhc---------------------------cHHHHHHHHHHHhCC-ce
Confidence 56776654443333334455433 4667776643 447899999999997 45
Q ss_pred cEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 192 KTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 192 ~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
..+.|||+...-.+|++..|.+.-+...
T Consensus 426 ~yvvIgdG~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 426 VYVVIGDGVEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred EEEEecCcHHHHHHHHhhCCceEeeccC
Confidence 6788999999999999999988777653
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=86.93 E-value=0.84 Score=45.06 Aligned_cols=35 Identities=17% Similarity=0.366 Sum_probs=26.4
Q ss_pred CCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHh
Q 024578 97 KPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRL 131 (265)
Q Consensus 97 ~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~ 131 (265)
.+.|++.+.|+.| +..++|+|+.+...++.++...
T Consensus 622 ~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~ 660 (934)
T PLN03064 622 RLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF 660 (934)
T ss_pred CCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC
Confidence 4667777777777 3678888988888888877654
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=84.47 E-value=1.9 Score=42.19 Aligned_cols=79 Identities=6% Similarity=-0.116 Sum_probs=56.3
Q ss_pred CCCCHHHHHHHHHHc------CCCCCcEEEEcCCh-hcHHHHHHcCce------------------------------EE
Q 024578 172 CKPSLEAIETAIRIA------NVDPKKTIFFDDSA-RNIASAKAAGLH------------------------------TV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~l------g~~~~~~i~vGD~~-~Di~~a~~aG~~------------------------------~i 214 (265)
+..|+.+++.+++++ +..++=++++||.. .|=.|++..+-. ++
T Consensus 676 gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 755 (797)
T PLN03063 676 GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYF 755 (797)
T ss_pred CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceE
Confidence 346788899999876 33567799999975 476666655421 12
Q ss_pred EECCCCCCCCCCceecCHhHHHHHHHHHhcCChhhh
Q 024578 215 IVGSSVPVPPADHALNSIHNIKEAIPEIWEGEGEQL 250 (265)
Q Consensus 215 ~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~~~~~~ 250 (265)
.+.-|...-.|.+.+++..|+.++|..+.....+..
T Consensus 756 ~v~VG~~~s~A~y~l~~~~eV~~lL~~l~~~~~~~~ 791 (797)
T PLN03063 756 SCAIGQARTKARYVLDSSNDVVSLLHKLAVANTTMT 791 (797)
T ss_pred EEEECCCCccCeecCCCHHHHHHHHHHHhccCcccc
Confidence 333444567899999999999999999987655443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.87 E-value=1.1 Score=44.89 Aligned_cols=48 Identities=17% Similarity=0.189 Sum_probs=33.6
Q ss_pred CCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHH
Q 024578 189 DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKE 237 (265)
Q Consensus 189 ~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~ 237 (265)
.+..+++|||+.||+.|.+.|.++ +++...+. ...+|+.+..+.=|..
T Consensus 793 ~~~~TLAIGDGANDVsMIQ~AhVG-VGIsG~EGmQAvmsSD~AIaqFrfL~r 843 (1151)
T KOG0206|consen 793 LKAVTLAIGDGANDVSMIQEAHVG-VGISGQEGMQAVMSSDFAIAQFRFLER 843 (1151)
T ss_pred CCceEEEeeCCCccchheeeCCcC-eeeccchhhhhhhcccchHHHHHHHhh
Confidence 446799999999999999988764 55554333 4457776666554444
|
|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=83.49 E-value=8.8 Score=38.58 Aligned_cols=42 Identities=14% Similarity=0.233 Sum_probs=34.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcE-EEEcCChh-cHHHHHHcCceEE
Q 024578 172 CKPSLEAIETAIRIANVDPKKT-IFFDDSAR-NIASAKAAGLHTV 214 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~-i~vGD~~~-Di~~a~~aG~~~i 214 (265)
+-.|+.+++++..++|++.+++ +++|||-| |++.. -.|.+..
T Consensus 954 ~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~L-l~G~~~t 997 (1050)
T TIGR02468 954 LASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGL-LGGLHKT 997 (1050)
T ss_pred CCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHH-hCCceeE
Confidence 4678999999999999999999 55999999 98877 4455433
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=83.25 E-value=1.1 Score=39.47 Aligned_cols=28 Identities=21% Similarity=0.300 Sum_probs=19.6
Q ss_pred cEEEEecCCCcc---C-Ccc-cHHHHHHHHHHH
Q 024578 13 ECLLFDLDDTLY---P-LST-GFNLACRRNIEE 40 (265)
Q Consensus 13 k~iiFDlDGTLl---d-~~~-~~~~~~~~~~~~ 40 (265)
.+|+||+||||+ + ... .+.....+++..
T Consensus 112 ~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~ 144 (366)
T PLN03017 112 IVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKK 144 (366)
T ss_pred eEEEEecCCcCcCCcCCcccccCCHHHHHHHHH
Confidence 577789999999 3 333 466667666666
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=82.85 E-value=0.68 Score=38.31 Aligned_cols=29 Identities=17% Similarity=0.207 Sum_probs=18.5
Q ss_pred ccEEEEecCCCccCCc-----ccHHHHHHHHHHH
Q 024578 12 YECLLFDLDDTLYPLS-----TGFNLACRRNIEE 40 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~-----~~~~~~~~~~~~~ 40 (265)
-++++||+||||++.. ......+.+.+..
T Consensus 3 ~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~ 36 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQK 36 (244)
T ss_pred cEEEEEecCccccCCcCCCcccCCCHHHHHHHHH
Confidence 3689999999999632 1233455555554
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.16 E-value=1.6 Score=34.66 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=22.4
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHH
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEE 40 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~ 40 (265)
-+++||+||||......+...+.+.+.+
T Consensus 12 ~l~lfdvdgtLt~~r~~~~~e~~~~l~~ 39 (252)
T KOG3189|consen 12 TLCLFDVDGTLTPPRQKVTPEMLEFLQK 39 (252)
T ss_pred eEEEEecCCccccccccCCHHHHHHHHH
Confidence 4788999999998777777777765555
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.85 E-value=0.87 Score=38.84 Aligned_cols=20 Identities=20% Similarity=0.197 Sum_probs=15.6
Q ss_pred cEEEEecCCCccCCcccHHH
Q 024578 13 ECLLFDLDDTLYPLSTGFNL 32 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~ 32 (265)
-+++||+||+|+.....+..
T Consensus 36 fgfafDIDGVL~RG~~~i~~ 55 (389)
T KOG1618|consen 36 FGFAFDIDGVLFRGHRPIPG 55 (389)
T ss_pred eeEEEecccEEEecCCCCcc
Confidence 48999999999976655544
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=80.89 E-value=1.8 Score=35.50 Aligned_cols=59 Identities=15% Similarity=0.145 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHcCCC---CCcEEEEcCChhcHHHHHHcCce-----EEEECCCC---CCCCCCceecC
Q 024578 173 KPSLEAIETAIRIANVD---PKKTIFFDDSARNIASAKAAGLH-----TVIVGSSV---PVPPADHALNS 231 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~---~~~~i~vGD~~~Di~~a~~aG~~-----~i~~~~~~---~~~~a~~~v~~ 231 (265)
..|..+++.+++.++.. ++-++|+||..+|-.+.+.+.-. .+.+.... ..-.|.|.+++
T Consensus 164 ~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 164 VNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred CChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 45899999999999875 78899999999998888876443 45554432 34456666554
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function | Back alignment and domain information |
|---|
Probab=80.54 E-value=0.86 Score=28.89 Aligned_cols=25 Identities=12% Similarity=0.311 Sum_probs=16.4
Q ss_pred HHHHHHHcCCCCCcEEEEcCChhcHHHHH
Q 024578 179 IETAIRIANVDPKKTIFFDDSARNIASAK 207 (265)
Q Consensus 179 ~~~~~~~lg~~~~~~i~vGD~~~Di~~a~ 207 (265)
++++++++|+ .+++||...|+++..
T Consensus 7 VqQLLK~fG~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKFGI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTTS---------S-HHHHHHHHH
T ss_pred HHHHHHHCCE----EEEeCChHHHHHHHH
Confidence 5688999998 799999999998875
|
; PDB: 2NN4_A. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 265 | ||||
| 3nuq_A | 282 | Structure Of A Putative Nucleotide Phosphatase From | 3e-17 | ||
| 3onn_A | 263 | Crystal Structure Of 5'-Nucleotidase Sdt1 From Sacc | 3e-17 | ||
| 3opx_A | 263 | Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt | 3e-16 |
| >pdb|3NUQ|A Chain A, Structure Of A Putative Nucleotide Phosphatase From Saccharomyces Cerevisiae Length = 282 | Back alignment and structure |
|
| >pdb|3ONN|A Chain A, Crystal Structure Of 5'-Nucleotidase Sdt1 From Saccharomyces Cerevisiae Length = 263 | Back alignment and structure |
|
| >pdb|3OPX|A Chain A, Crystal Structure Of Pyrimidine 5 -Nucleotidase Sdt1 From Saccharomyces Cerevisiae Complexed With Uridine 5'-Monophosphate Length = 263 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 166 bits (420), Expect = 2e-50
Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 34/256 (13%)
Query: 2 DTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELY 61
D N + FD+D+ LY ST + +++I F HL + + + Y
Sbjct: 47 DISATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYY 106
Query: 62 REHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYE-KLKPDPVLRNLLLSMPQ-----RKII 115
+E+G + G + ++ + E++ V LP + LKPD LRN+LL + Q + +
Sbjct: 107 KEYGLAIRG-LVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWL 165
Query: 116 FTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175
FTNA + HA+ L LG+ D F+G+ + ++CKP
Sbjct: 166 FTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD-------------------TLVCKPH 206
Query: 176 LEAIETAIRIANVDPKKT-IFFDDSARNIASAKAAGLHTVIVGSSVPV-------PPADH 227
++A E A++ + + + F DDS +NI + G+ T I V P
Sbjct: 207 VKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAI 266
Query: 228 ALNSIHNIKEAIPEIW 243
++ I + + +++
Sbjct: 267 VISDILELPHVVSDLF 282
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 4e-21
Identities = 56/260 (21%), Positives = 101/260 (38%), Gaps = 39/260 (15%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG- 70
+ + FDLDDTL S +A + IE + L +D +EL +E+G+
Sbjct: 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYH 61
Query: 71 ----LKAVGYEFDNDEFHAFVHG--KLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQ 121
L+ + ++ A V + L+ P R +L+ + + I T+ +
Sbjct: 62 FDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121
Query: 122 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181
E + RL L+D FE +I + G++ KP + +
Sbjct: 122 VKQWEKILRLELDDFFEHVIISDFE-----------GVK------------KPHPKIFKK 158
Query: 182 AIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----GSSVPVPPADHALNSIHNIK 236
A++ NV P++ + D + I AK G+ TV S + +A I N++
Sbjct: 159 ALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLE 218
Query: 237 EAIPEIWEGEGEQLEQVIQP 256
+ E+ E ++V P
Sbjct: 219 S-LLEVLARESSSNKKVHPP 237
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 4e-19
Identities = 34/278 (12%), Positives = 78/278 (28%), Gaps = 58/278 (20%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
M + + + + FD DDTL+ + A E +S +L + +S + + L +
Sbjct: 2 MTPIAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEAD-FEAILSGYLDLGDSRMQQHLLAV 60
Query: 61 ----YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYE-----------KLKPDPVLRNL 105
+ G G+ E + A + + ++ +R
Sbjct: 61 ERRNLKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREA 120
Query: 106 LLSMPQ--RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163
+ ++ ++ T D H + + + GL D F I
Sbjct: 121 VAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS------------------- 161
Query: 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGS---- 218
+ + + ++ ++ + +S ++ A G +
Sbjct: 162 ---------EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTW 212
Query: 219 ---SVPVPPADHA----LNSIHNIKEAIPEIWEGEGEQ 249
AD + A+ + G Q
Sbjct: 213 AHEQDHGVAADEPRLREVPDPSGWPAAVRALDAQAGRQ 250
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-16
Identities = 53/249 (21%), Positives = 75/249 (30%), Gaps = 42/249 (16%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEF---MSQHLHIDESEVPRMCLELYREHGTT 67
Y LLFD+DDT+ LA R E+ ++ + + + + E T
Sbjct: 6 RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMT 65
Query: 68 M---------AGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL--LSMPQRKIIF 116
A LK GYE D L E + +L+ L I
Sbjct: 66 RDEVVNTRFSALLKEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIV 124
Query: 117 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176
TN + L GL F+ I E G + KP
Sbjct: 125 TNGVSHTQYKRLRDSGLFPFFKDIFVSEDT-----------GFQ------------KPMK 161
Query: 177 EAIETAI-RIANVDPKKTIFFDDSARN-IASAKAAGLHTV-IVGSSVPVPPADHALNSIH 233
E RI + T+ DS I + AGL T + P P I
Sbjct: 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIR 221
Query: 234 NIKEAIPEI 242
++E + I
Sbjct: 222 KLEE-LYHI 229
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 2e-15
Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 64/271 (23%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP------ 54
M + FDLD+TL + I+ S++ + +E+E+
Sbjct: 13 MGLS------RVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQV 66
Query: 55 RMCLELYREHGTTMAG---------LKAVGYEFDNDE-----FHAFVHGKLPYEKLKPD- 99
++ E + + T + ++ DN + + + +L + L D
Sbjct: 67 KLSKECFHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDV 126
Query: 100 -PVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155
+L L ++++ + TN D++ E + + F+ I+
Sbjct: 127 KAMLTEL-----RKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQ--------- 172
Query: 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTV 214
E KP+ + V P + D+ I AGL
Sbjct: 173 --KEE------------KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKAT 218
Query: 215 I---VGSSVPVPPADHALNSIHNIKEAIPEI 242
+ VP+ + + ++ E +P +
Sbjct: 219 VWINKSGRVPLTSSPMPHYMVSSVLE-LPAL 248
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 3e-15
Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 36/209 (17%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 71
+ L +D+ L L+ G++ R ++ + EL T L
Sbjct: 4 IKALFWDIGGVL--LTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYL 61
Query: 72 KAV----GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQR-KI-IFTNADQKHAM 125
+ V +F ++F A + E+ +P P + L + QR ++ N +
Sbjct: 62 EQVVFYQPRDFTPEDFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNE 116
Query: 126 EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 185
+ GL + S+ + KP+ + +
Sbjct: 117 YRIRTFGLGEFLLAFFT-----------------------SSALGVMKPNPAMYRLGLTL 153
Query: 186 ANVDPKKTIFFDDSARNIASAKAAGLHTV 214
A V P++ + DD +N+ +A+A G+H V
Sbjct: 154 AQVRPEEAVMVDDRLQNVQAARAVGMHAV 182
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 2e-14
Identities = 34/254 (13%), Positives = 76/254 (29%), Gaps = 44/254 (17%)
Query: 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEF--MSQHLHIDESEVPRMCLELYREHGTT 67
+ + FD+ +TL L+ + + + + + EV ++ +
Sbjct: 2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASED 61
Query: 68 -----MAGLKAVGYEFDNDE---FHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IF 116
+A+ + D A L ++ + L + +R + +
Sbjct: 62 PRKVLTGSQEALAGKLKVDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVI 121
Query: 117 TNAD---QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173
N + +L R GL + + + + K
Sbjct: 122 GNVMFWPGSYTRLLLERFGLMEFIDKTFFADEV-----------LSY------------K 158
Query: 174 PSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----GSSVPVPPADHA 228
P E E + V P++++ D+ A+ G+ V + +
Sbjct: 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFE 218
Query: 229 LNSIHNIKEAIPEI 242
+ SI N+K+ I I
Sbjct: 219 IPSIANLKDVIELI 232
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 69.3 bits (170), Expect = 3e-14
Identities = 42/258 (16%), Positives = 87/258 (33%), Gaps = 54/258 (20%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE-----SEVPRMCLELYREHGTTMA 69
+ FD TL + + E L+ ++ R Y
Sbjct: 5 VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPL 64
Query: 70 G----------LKAVGYEFDNDEFHAFVHGKLPYEKLKPD--PVLRNLLLSMPQRKI--- 114
+ G+++ + + + Y +L P+ VL++L + K
Sbjct: 65 RDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSL-----KGKYHVG 119
Query: 115 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174
+ T++D + AM L LG++D F+ I E G KP
Sbjct: 120 MITDSDTEQAMAFLDALGIKDLFDSITTSEEA-----------GFF------------KP 156
Query: 175 SLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV-GSSVPVPPADHALNSI 232
E A++ A V ++ ++ D+ +K G+ ++++ D +
Sbjct: 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV 216
Query: 233 HNIKEAIPEI---WEGEG 247
+++E + +I G+G
Sbjct: 217 SDLRE-VIKIVDELNGQG 233
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 66.3 bits (162), Expect = 4e-13
Identities = 45/257 (17%), Positives = 81/257 (31%), Gaps = 54/257 (21%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-- 68
Y+ L FDLDDT++ S +++ LY+ T +
Sbjct: 4 KYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHY----YTLYQRRNTELWL 59
Query: 69 ------------------AGLKAVGYEFD--NDEFHAFVHGKLPYEKLKPDPVLRNLL-- 106
L+AVG E + + F +P K P + +L
Sbjct: 60 EYGEGKVTKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIP-TKSGLMPHAKEVLEY 118
Query: 107 LSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166
L+ I +N ++ + G++ F+ II E + G+
Sbjct: 119 LAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDL-----------GVL------ 161
Query: 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPPA 225
KP E A+ + ++++ DS I A G+H +
Sbjct: 162 ------KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFP 215
Query: 226 DHALNSIHNIKEAIPEI 242
IH++KE + +
Sbjct: 216 FQPTYHIHSLKE-LMNL 231
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 8e-13
Identities = 32/265 (12%), Positives = 74/265 (27%), Gaps = 60/265 (22%)
Query: 8 TAANYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE 63
+ +FDLD D++Y + A +++ + + +R+
Sbjct: 2 SLRPQTSFIFDLDGTLTDSVYQNVAAWKEALDA-------ENIPLAMWRI-------HRK 47
Query: 64 HGTTMAG-----LKAVGYEFDNDEFHAFVHGKLPY-----EKLKPDPVLRNLLLSMPQRK 113
G + + G +++ ++ P LL ++ +
Sbjct: 48 IGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQAYERLQHQIIALPGAVELLETLDKEN 107
Query: 114 I---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170
+ I T+ A L L L+ I+ + ++
Sbjct: 108 LKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSYG--------------------- 146
Query: 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ 224
KP + A + + + D+ ++ +A+ V + S
Sbjct: 147 --KPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAG 204
Query: 225 ADHALNSIHNIKEAIPEIWEGEGEQ 249
A ++ + EI EG
Sbjct: 205 ALRVYEDPLDLLNHLDEIASREGHH 229
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 1e-12
Identities = 34/256 (13%), Positives = 73/256 (28%), Gaps = 54/256 (21%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE-------SEVPRMCLELYRE 63
+ + FD DDTL+ F ++ + + + E +E+ + + Y
Sbjct: 7 LIKVIAFDADDTLWSNEPFFQEVEKQ-YTDLLKPYGTSKEISAALFQTEMNNLQILGYGA 65
Query: 64 HGTTM----AGLKAVGYEFDNDE----FHAFVHGKLPYEKLKPD--PVLRNLLLSMPQRK 113
T+ L+ + D +L P L+ L + +
Sbjct: 66 KAFTISMVETALQISNGKIAADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKL 125
Query: 114 IIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173
++ T D L R GL F+ I
Sbjct: 126 VVATKGDLLDQENKLERSGLSPYFDHIEVMS----------------------------D 157
Query: 174 PSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV------GSSVPVPPAD 226
+ + + I + P + + +S ++ I + G + V + V A
Sbjct: 158 KTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAH 217
Query: 227 HALNSIHNIKEAIPEI 242
L + + + + +
Sbjct: 218 ERLKQVKRLDD-LLSL 232
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 2e-12
Identities = 30/246 (12%), Positives = 65/246 (26%), Gaps = 46/246 (18%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYR-------- 62
Y+ +L D +TL GF + + + + +D +V R +
Sbjct: 3 YKAVLVDFGNTLV----GFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDED 58
Query: 63 --EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFT 117
EH L +G + + L + + +
Sbjct: 59 GLEHVDPKDFLYILGIYPSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVS 118
Query: 118 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 177
NA +L + L+ F+ + I KP+ +
Sbjct: 119 NASP-RVKTLLEKFDLKKYFDALALSYEI-----------KAV------------KPNPK 154
Query: 178 AIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK 236
A+ + D AK + + +++ P + ++
Sbjct: 155 IFGFALAKVGYP---AVHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLREAL 211
Query: 237 EAIPEI 242
+ I E+
Sbjct: 212 QKIEEM 217
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 3e-12
Identities = 43/272 (15%), Positives = 82/272 (30%), Gaps = 64/272 (23%)
Query: 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEVPRMCLELYREHGTT----- 67
L +D+ DTL H L ++ S + + + YR +
Sbjct: 3 LLTWDVKDTLLR----LRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYG 58
Query: 68 ---------------MAGLKAVGY---EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 109
+ G + + + L
Sbjct: 59 LSHGLTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLREC 118
Query: 110 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166
R + + +N D+ +LG LGL + F+ ++ E G
Sbjct: 119 RTRGLRLAVISNFDR-RLEGILGGLGLREHFDFVLTSEAA-----------GWP------ 160
Query: 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSVPVPP- 224
KP + A+R+A+++P D+ +A G+H+ +V + P
Sbjct: 161 ------KPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPV 214
Query: 225 ------ADHALNSIHNIKEAIPEIWEGEGEQL 250
+H L S+ ++ A+ + EG E L
Sbjct: 215 VRDSVPKEHILPSLAHLLPAL-DCLEGSAENL 245
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 6e-12
Identities = 39/227 (17%), Positives = 72/227 (31%), Gaps = 56/227 (24%)
Query: 10 ANYECLLFDLDDTLYPLSTGFNLACRR-------NIEEFMSQHLH-----------IDES 51
A ++FDL L L+ + RR +IEE + +L E
Sbjct: 3 AMIRNIVFDLGGVLIHLN--REESIRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEE 60
Query: 52 EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQ 111
E + +G E + + + G L + + S+
Sbjct: 61 E----FRTELSRY---------IGKELTYQQVYDALLGFLEE----ISAEKFDYIDSLRP 103
Query: 112 --RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169
R + +N + + L F+ + ++S Q
Sbjct: 104 DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKV-----------------YASCQM 146
Query: 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
KP+ + I + + P++T+F DD N+A+A+ G HT
Sbjct: 147 GKYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP 193
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 61.8 bits (150), Expect = 1e-11
Identities = 44/222 (19%), Positives = 66/222 (29%), Gaps = 48/222 (21%)
Query: 11 NYECLLFDLDDTLYPLS-----TGFNLACRRNIEEFMSQHLH-----------IDESEVP 54
+ LL DL L L F +NIEE H I +E
Sbjct: 27 GIKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAE-- 84
Query: 55 RMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI 114
+ RE +G + + A + L + + L L
Sbjct: 85 --FRDGIREM---------MGKMVSDKQIDAAWNSFLV--DIPTYKLDLLLKLREKYVVY 131
Query: 115 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174
+ +N + H V F+ FE + S + + KP
Sbjct: 132 LLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKT-----------------YLSYEMKMAKP 174
Query: 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
E + A +DPK+T F DDS N A+ G+ T
Sbjct: 175 EPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP 216
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-11
Identities = 22/136 (16%), Positives = 39/136 (28%), Gaps = 26/136 (19%)
Query: 97 KPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 153
+ RNLL + + + I +N + L + ++
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLL----------- 66
Query: 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT 213
S + + KP A + A ++ + + DDS N+ A AGL
Sbjct: 67 ------------SGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVG 114
Query: 214 VIVGSSVPVPPADHAL 229
V L
Sbjct: 115 VYYQQFDRAVVEIVGL 130
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 61.4 bits (150), Expect = 2e-11
Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 77/268 (28%)
Query: 12 YECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHIDE 50
Y +LFDLD D+ ++ + + ++ ++ + DE
Sbjct: 4 YNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYYNFDE 63
Query: 51 SEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP 110
++ YR++ ++ F Y+ ++ LL S+
Sbjct: 64 ETATVA-IDYYRDY-----------FK-AKGMFENK-----VYDGIEA------LLSSLK 99
Query: 111 QRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167
+ T+ + ++L L F+ I+
Sbjct: 100 DYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGKL------------------ 141
Query: 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVP 223
+ I A+ N+ I D ++ A L ++ V GS +
Sbjct: 142 -----STKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELK 196
Query: 224 P--ADHALNSIHNIKEAIPEIWEGEGEQ 249
A++ +NS+ + + I E+ EG
Sbjct: 197 NAGANYIVNSVDELHKKILELREGHHHH 224
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 4e-11
Identities = 37/230 (16%), Positives = 66/230 (28%), Gaps = 70/230 (30%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHID 49
Y LFD D D+ + T F R+ +EE S I
Sbjct: 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGIT 64
Query: 50 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 109
+++ + Y + + + + P L +
Sbjct: 65 DADQLESFRQEYSKE-----------ADIYMNANTI------LFPDTLP------TLTHL 101
Query: 110 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166
++ I I + + + L +D F+ II E +
Sbjct: 102 KKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTHH----------------- 144
Query: 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
KP E + AI P++ ++ DS + +A AAG+ V
Sbjct: 145 ------KPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGV 188
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 59.6 bits (145), Expect = 7e-11
Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 56/259 (21%)
Query: 10 ANYECLLFDLDDTLY---PLSTGFNLACRRNIEEFMSQH-LHIDESEV---------PRM 56
+ ++ ++FD D L + + +++ I E+ +
Sbjct: 2 SGFDLIIFDCDGVLVDSEII-------AAQVESRLLTEAGYPISVEEMGERFAGMTWKNI 54
Query: 57 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF 116
L++ E ++ D+ + +L +K ++ L + + I
Sbjct: 55 LLQVESEASIPLS------ASLL-DKSEKLLDMRLE-RDVKIIDGVKFALSRLTTPRCIC 106
Query: 117 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176
+N+ +L ++GL+ F I + G + KP
Sbjct: 107 SNSSSHRLDMMLTKVGLKPYFAPHIY----------SAKDLGADRV----------KPKP 146
Query: 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADH-------AL 229
+ V P + + +DS I A+AAG+ + + P+ A
Sbjct: 147 DIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAE 206
Query: 230 NSIHNIKEAIPEIWEGEGE 248
I +++ +P + E
Sbjct: 207 TVISRMQD-LPAVIAAMAE 224
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 60.2 bits (145), Expect = 9e-11
Identities = 39/260 (15%), Positives = 77/260 (29%), Gaps = 26/260 (10%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT--- 67
N + L LD+ + + +EEF + LH+ ++ + + L+
Sbjct: 129 NEQLPLQFLDNVKVGKNNIY-----AALEEFATTELHVSDATLFSLKGALWTLAQEVYQE 183
Query: 68 -MAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQRKI---IFTNADQK 122
G K F G + E L+P ++ LL + I T
Sbjct: 184 WYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243
Query: 123 HAMEVLGRLGLEDCFEG---IICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 179
+ LGL FE + + + N FS + +
Sbjct: 244 ETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYE 303
Query: 180 ETAI-RIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---------ADHAL 229
+ V+ DS ++ SA+ G + + + AD+ +
Sbjct: 304 SYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVI 363
Query: 230 NSIHNIKEAIPEIWEGEGEQ 249
N + ++ + + E
Sbjct: 364 NHLGELRGVLDNLLEHHHHH 383
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 58.8 bits (143), Expect = 1e-10
Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 37/186 (19%)
Query: 71 LKAVGYEFDNDEFHAFVHGKLPY-----EKLKPDPVL---RNLLLSMPQRKI---IFTNA 119
L + +EF K + + P V LL + KI + + +
Sbjct: 57 LDLADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS 116
Query: 120 DQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAI 179
K+ +L R+ L F+ I PA+ KP+ +
Sbjct: 117 --KNGPFLLERMNLTGYFDAIAD---------PAEVAAS--------------KPAPDIF 151
Query: 180 ETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EA 238
A V P ++I +DS I + K +G + VG + + + E
Sbjct: 152 IAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEF 211
Query: 239 IPEIWE 244
+ E+W
Sbjct: 212 LKEVWL 217
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 2e-10
Identities = 37/250 (14%), Positives = 74/250 (29%), Gaps = 47/250 (18%)
Query: 3 TMGRTTAANYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCL 58
T G + ++FD DT + + + L
Sbjct: 16 TQGPGSMKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMG-------------YKNIDL 62
Query: 59 ELYREHGTTMAGLKAVGYEFDN--DEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 114
+ + +G + + + + + LL ++ + I
Sbjct: 63 DSIPNSTIPKYLITLLGKRWKEATILYENSLEKSQKSDNFMLNDGAIELLDTLKENNITM 122
Query: 115 -IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173
I +N + + + L F+ II K
Sbjct: 123 AIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTI-----------------------K 159
Query: 174 PSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSI 232
PS E + A+ N++P K F DS +I SA AG + GS+ + + +
Sbjct: 160 PSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNIIKD-ILSFKNF 218
Query: 233 HNIKEAIPEI 242
++I+ I ++
Sbjct: 219 YDIRNFICQL 228
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 5e-10
Identities = 28/224 (12%), Positives = 61/224 (27%), Gaps = 64/224 (28%)
Query: 15 LLFDLDDTLYPLSTGFNLACRR-------NIEEFMSQHLH-----------IDESEVPRM 56
+FDL + + + FN + I +
Sbjct: 10 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAF--- 64
Query: 57 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 114
E + ++F + P + ++ + ++
Sbjct: 65 -AEALCHE---------MALPLSYEQFSHGWQAVF----VALRPEVIAIMHKLREQGHRV 110
Query: 115 -IFTNADQKHAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172
+ +N ++ H + D + I S + +
Sbjct: 111 VVLSNTNRLHTTFWPEEYPEIRDAADHIY----------------------LSQDLG-MR 147
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
KP + ++ P T+FFDD+A NI A G+ +++V
Sbjct: 148 KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 56.0 bits (136), Expect = 1e-09
Identities = 33/250 (13%), Positives = 65/250 (26%), Gaps = 65/250 (26%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH-G 65
Y+ L+FD+D ++ +T P + +
Sbjct: 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATY--------------GKPFSPAQAQKTFPM 48
Query: 66 TTMAGLKAVGYEFDNDEFHAFV-----HGKLPYEKLKP----DPVLRNLLLSMPQRKI-- 114
+ +G EF F Y++++ + L ++
Sbjct: 49 AAEQAMTELG--IAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQL-----PSELRL 101
Query: 115 -IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173
I T+ + + I + R K
Sbjct: 102 GIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR-----------------------K 138
Query: 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPADHAL 229
P + TA+ NV P+ +F DS + +A+AA + + + H
Sbjct: 139 PDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF 198
Query: 230 NSIHNIKEAI 239
+I E
Sbjct: 199 QKPLDILELF 208
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 2e-09
Identities = 28/235 (11%), Positives = 64/235 (27%), Gaps = 76/235 (32%)
Query: 1 MDTMGRTTAANYECLLFDLD----DTLYPLSTGFNLAC------------RRNIEEFMSQ 44
M M Y ++DL D + F + ++
Sbjct: 1 MKGM------KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF 54
Query: 45 HLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRN 104
+ + LE Y+E+ + + F + +
Sbjct: 55 AIETFAPNLENF-LEKYKEN-----------EARELEHPILF-------------EGVSD 89
Query: 105 LLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 161
LL + + + ++ + +E+L + + F ++ + R
Sbjct: 90 LLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFKR------------ 136
Query: 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
KP+ E++ + + D +I + +AAGL T +
Sbjct: 137 -----------KPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHLF 178
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 54.9 bits (133), Expect = 3e-09
Identities = 36/230 (15%), Positives = 68/230 (29%), Gaps = 71/230 (30%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRRN----------------IEEFMSQHLHIDE 50
NYE +LFDLD D ++ + + + ++ ++
Sbjct: 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEYYKFED 87
Query: 51 SEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP 110
+ +E YRE+ + D F Y ++ +L +
Sbjct: 88 KKAKEA-VEKYREY-----------FA-DKGIFEN-----KIY------ENMKEILEMLY 123
Query: 111 QRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167
+ + T+ A +L ++ F+ I R
Sbjct: 124 KNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTR------------------ 165
Query: 168 QRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIV 216
E I+ + + NV D K I D +I AK G+ ++ V
Sbjct: 166 -----VNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGV 210
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 5e-09
Identities = 35/218 (16%), Positives = 74/218 (33%), Gaps = 49/218 (22%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH-G 65
+ +LFDLD D+ ++ + + + ++ G
Sbjct: 2 SLRVILFDLDGTLIDSAKDIALALEKTLKEL--------------GLEEYYPDNVTKYIG 47
Query: 66 TTMAGL--KAVGYEFDNDEFHAFVH--GKLPYEKLKPDPVLRNLLLSMPQRKI---IFTN 118
+ L K + +F + F + P KP P + L ++ + + +N
Sbjct: 48 GGVRALLEKVLKDKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSN 107
Query: 119 ADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 178
++ + ++L L L F+ I+ +T + KPS
Sbjct: 108 KLEELSKKILDILNLSGYFDLIVGGDTFGEK-----------------------KPSPTP 144
Query: 179 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
+ + I +P+K + D+ +I + K AG T +
Sbjct: 145 VLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALA 182
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 6e-09
Identities = 31/230 (13%), Positives = 67/230 (29%), Gaps = 73/230 (31%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHID 49
++DLD D+ + +G + +++ + + D
Sbjct: 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLL-VRVAED 61
Query: 50 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM 109
+ + L R ++ P R +L
Sbjct: 62 RNLDVEV-LNQVRAQ-----------------------SLAEKNAQVVLMPGAREVLAWA 97
Query: 110 PQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSS 166
+ I I+T+ +A +L LG+E F I+ ++ R
Sbjct: 98 DESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVR----------------- 139
Query: 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
KPS EA + ++ T + D ++ A+ +G+ ++
Sbjct: 140 ------KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF 183
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 7e-09
Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 29/131 (22%)
Query: 115 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174
+ TN KH +L G++ F ++ +++ KP
Sbjct: 135 VVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI-----------------------KP 171
Query: 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV------GSSVPVPPADHA 228
+ PK+ +F DS +I +A +AG V + + D
Sbjct: 172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWI 231
Query: 229 LNSIHNIKEAI 239
+ +I +
Sbjct: 232 FDDFADILKIT 242
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 7e-09
Identities = 44/278 (15%), Positives = 87/278 (31%), Gaps = 63/278 (22%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLY---PLSTGFNLACRRNIEEFMSQHLHIDESEVPRMC 57
M + + LFD+D T+ P +F + D V
Sbjct: 24 MPLTTKPLSLKINAALFDVDGTIIISQPAI-------AAFWRDFGKDKPYFDAEHV---- 72
Query: 58 LELYREHG-TTMAGLKAVGYEFDNDEFHAFVHGKLPY---EKLKPDPVLRNLLLSMPQRK 113
++ HG T + +F ++E+ + G++P E P L ++
Sbjct: 73 --IHISHGWRTYDAIAKFAPDFADEEYVNKLEGEIPEKYGEHSIEVPGAVKLCNALNALP 130
Query: 114 I----IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169
+ T+ + A + L ++ E I D G
Sbjct: 131 KEKWAVATSGTRDMAKKWFDILKIKR-PEYFITAN---------DVKQG----------- 169
Query: 170 ILCKPS-------LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV 222
KP + I + K + F+D+ IA+ KAAG V + ++ +
Sbjct: 170 ---KPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDL 226
Query: 223 PP-----ADHALNSIHNIKEAIPEIWEGEGEQLEQVIQ 255
D + + +I+ + E +++E +
Sbjct: 227 DFLKEKGCDIIVKNHESIR---VGEYNAETDEVELIFD 261
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 53.5 bits (129), Expect = 9e-09
Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 24/124 (19%)
Query: 122 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181
++A ++L RL + D F I+ P G KP + T
Sbjct: 118 RNAPKILRRLAIIDDFHAIVD---------PTTLAKG--------------KPDPDIFLT 154
Query: 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIP 240
A + +V P +D+ I++ K+AG+ V VG P+ AD + ++ E +
Sbjct: 155 AAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLELLH 214
Query: 241 EIWE 244
E WE
Sbjct: 215 EEWE 218
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 53.0 bits (127), Expect = 1e-08
Identities = 28/221 (12%), Positives = 57/221 (25%), Gaps = 56/221 (25%)
Query: 15 LLFDLDDTLYPLSTGFNLACRR---NIEEFMSQ---------------HLHIDESEVPRM 56
+FD TL + + + E H + D ++
Sbjct: 17 CVFDAYGTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDE 76
Query: 57 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 114
L + + D + Y++L P L +
Sbjct: 77 ALT------FALRTYHLEDRKGLKDRLMSA------YKELSAYPDAAETLEKLKSAGYIV 124
Query: 115 -IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173
I +N + + L L+ + + + + + K
Sbjct: 125 AILSNGNDEMLQAALKASKLDRVLDSCLSADDLK-----------------------IYK 161
Query: 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214
P + A V+P + F +A ++ A G +TV
Sbjct: 162 PDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTV 202
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-08
Identities = 36/263 (13%), Positives = 70/263 (26%), Gaps = 51/263 (19%)
Query: 1 MDTMGRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL 60
MD M E ++F T + G +E F + + I E + L
Sbjct: 1 MDRM------KIEAVIFAWAGTT--VDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLL 52
Query: 61 YREHGTTMAGLKAV--------GYEFDNDEFHAFVHGKLPY------EKLKPDPVLRNLL 106
+H + + + + P ++ ++
Sbjct: 53 KIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVI 112
Query: 107 LSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163
S+ +R I T ++ V L+ + P D G
Sbjct: 113 ASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLV--------TPDDVPAG----- 159
Query: 164 FSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIV---GSS 219
+P V P I D+ ++ + AG+ TV V S
Sbjct: 160 ---------RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSE 210
Query: 220 VPVPPADHALNSIHNIKEAIPEI 242
+ + + ++E I +
Sbjct: 211 LGLTEEEVENMDSVELREKIEVV 233
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 52.2 bits (125), Expect = 2e-08
Identities = 32/258 (12%), Positives = 71/258 (27%), Gaps = 53/258 (20%)
Query: 15 LLFDLDDTLYPLSTGFNLACR---RNIEEFMSQ---------------HLHIDESEVPRM 56
+ FDL TL+ + + E + + +++ +
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 66
Query: 57 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF 116
L T L P+ ++ L + I
Sbjct: 67 ALR------FTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSL---RELKRRGLKLAIL 117
Query: 117 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176
+N + V+ GL D F+ ++ + + KP
Sbjct: 118 SNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY-----------------------KPDN 154
Query: 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIHN 234
E A + +D +F +A + A+ G T + +V + +
Sbjct: 155 RVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS 214
Query: 235 IKEAIPEIWEGEGEQLEQ 252
++ + E++E + E+
Sbjct: 215 LRA-VVELFETAAGKAEK 231
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 51.1 bits (122), Expect = 7e-08
Identities = 37/220 (16%), Positives = 63/220 (28%), Gaps = 56/220 (25%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNI----EEFMSQ---------------HLHIDESEVPR 55
++FD TL+ + + + A R E + D V R
Sbjct: 5 VVFDAYGTLFDVQSVAD-ATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 56 MCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDP-VLRNLLLSMPQRKI 114
L L +G E D Y +L P P + L P ++
Sbjct: 64 EALA--------YT-LGTLGLEPDESFLADMAQA---YNRLTPYPDAAQCLAELAPLKRA 111
Query: 115 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174
I +N ++ GL D F+ +I + F KP
Sbjct: 112 ILSNGAPDMLQALVANAGLTDSFDAVISVDAKR---------------VF--------KP 148
Query: 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV 214
++ + V P + +F + ++ AK G
Sbjct: 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVA 188
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 8e-08
Identities = 27/197 (13%), Positives = 59/197 (29%), Gaps = 37/197 (18%)
Query: 71 LKAVGYEFDNDEFHAFVHGKL-PYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHA-- 124
+ +G + + H L Y ++ + L + Q I +N
Sbjct: 7 IWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEV 66
Query: 125 -MEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAI 183
VL G+ D F+ I + +E KP + +
Sbjct: 67 IKRVLTNFGIIDYFDFIYASNSELQPG-------KME------------KPDKTIFDFTL 107
Query: 184 RIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV----------GSSVPVPPADHALNSI 232
+D + + ++ + I A AG+H + + + PP + +
Sbjct: 108 NALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDL 167
Query: 233 HNIKEAIPEIWEGEGEQ 249
++ EA+ + +
Sbjct: 168 ADVPEALLLLKKISEGH 184
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-07
Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 26/126 (20%)
Query: 117 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176
+++ + L L+ F+ ++ + + + KP+
Sbjct: 112 SSSVKADIFRALEENRLQGFFDIVLS----------GEE---FKES----------KPNP 148
Query: 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP---ADHALNSIH 233
E TA++ NV + + +DS + IA+ AA + + + A L+S+
Sbjct: 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLT 208
Query: 234 NIKEAI 239
++ + I
Sbjct: 209 DVLDLI 214
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-07
Identities = 39/260 (15%), Positives = 81/260 (31%), Gaps = 53/260 (20%)
Query: 11 NYECLLFDLDDTLY---PLST--GFNLACRRNI---EEFMSQHLHIDESEVPRMCLELYR 62
+ + +LFD+D L+ P + R E H + + R
Sbjct: 22 DLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRER 81
Query: 63 EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNA 119
H T +KA+ +EF+ K P + P +L + + + T +
Sbjct: 82 GHDATEEEIKAIYQAK-TEEFN-----KCPKAERMPG--ALEVLTKIKSEGLTPMVVTGS 133
Query: 120 DQKHAMEVLG-RLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 178
Q ++ L ++ + + KP+ E
Sbjct: 134 GQTSLLDRLNHNFPGIFQANLMVTAFDV-------------KYG----------KPNPEP 170
Query: 179 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------ADHALNSI 232
A++ P + + +++ + + AAG+ T+ V + A+ +S+
Sbjct: 171 YLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSM 230
Query: 233 HNIKEAIPEIWEGEGEQLEQ 252
+ WE L+Q
Sbjct: 231 ----PDFNKNWETLQSALKQ 246
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 3e-07
Identities = 38/248 (15%), Positives = 78/248 (31%), Gaps = 61/248 (24%)
Query: 1 MDTMGRTTAANYECLLFDLD----DTLYPLSTGFNLACRRNIEEFMSQH-LHIDESEV-- 53
+M A ++ +LFDLD ++ + + +++ LH+D +E+
Sbjct: 20 FQSM---PDAPFDAVLFDLDGVLVESEG--------IIAQVWQSVLAERGLHLDLTEIAM 68
Query: 54 -------PRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL 106
+ L ++H E F+A + G + L
Sbjct: 69 YFTGQRFDGVLAYLAQQHDFVPPPDFLDVLE---TRFNAAMTG------VTAIEGAAETL 119
Query: 107 LSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163
++ + I +N+++ L GL + I
Sbjct: 120 RALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHI---------------------- 157
Query: 164 FSSNQRILC-KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTV-IVGSSVP 221
+ + KP + A + + P++ + +DS A+ AAG ++ P
Sbjct: 158 YDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHP 217
Query: 222 VPPADHAL 229
P AL
Sbjct: 218 HPDGAAAL 225
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 3e-07
Identities = 17/131 (12%), Positives = 45/131 (34%), Gaps = 30/131 (22%)
Query: 115 IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174
+ +N + ++ L F+ + ++ R KP
Sbjct: 131 VVSNKPNEAVQVLVEEL-FPGSFDFALGEKSGIRR-----------------------KP 166
Query: 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV------GSSVPVPPADHA 228
+ + +++ V K ++ DS +I +A+ + + + V + A
Sbjct: 167 APDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVI 226
Query: 229 LNSIHNIKEAI 239
+++ ++EAI
Sbjct: 227 VDTAEKLEEAI 237
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-07
Identities = 33/256 (12%), Positives = 80/256 (31%), Gaps = 49/256 (19%)
Query: 5 GRTTAANYECLLFDLDDTLY---PLST--GFNLACRRNI---EEFMSQHLHIDESEVPRM 56
G + +LFD+D L+ P + + + E H + +
Sbjct: 17 GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINI 76
Query: 57 CLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI-- 114
+ T ++++ +E + F+ P + P LL + +
Sbjct: 77 VFQRELGKEATQEEIESIYHEK-SILFN-----SYPEAERMPG--AWELLQKVKSEGLTP 128
Query: 115 -IFTNADQKHAME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172
+ T + Q +E + E ++ A + ++
Sbjct: 129 MVVTGSGQLSLLERLEHNFPGMFHKELMVT----------AFD---VKYG---------- 165
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP------AD 226
KP+ E A++ + + + +++ + + AG+ T+ V + AD
Sbjct: 166 KPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGAD 225
Query: 227 HALNSIHNIKEAIPEI 242
S+ + ++ I
Sbjct: 226 LLFPSMQTLCDSWDTI 241
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-07
Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 26/130 (20%)
Query: 122 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181
+A +L L L + F + + KP E
Sbjct: 121 LNAPTILAALELREFFTFCAD---------ASQLKNS--------------KPDPEIFLA 157
Query: 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIP 240
A V P+ I +D+ I + A+G+ +V +G+ + A L S ++ +
Sbjct: 158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGA--GLTGAQLLLPSTESLTWPRLS 215
Query: 241 EIWEGEGEQL 250
W+ E L
Sbjct: 216 AFWQNVAENL 225
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 5e-07
Identities = 36/221 (16%), Positives = 62/221 (28%), Gaps = 45/221 (20%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRR---------NIEEFMSQHLHIDESEVPRMCLELY 61
+++ L FD TL TG A + +E + + + LY
Sbjct: 5 DFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALY 64
Query: 62 RE--HGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI--IFT 117
++ K G E D E F + P L + + I +
Sbjct: 65 QDILRAVYDRIAKEWGLEPDAAEREEFGTS---VKNWPAFPDTVEALQYLKKHYKLVILS 121
Query: 118 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS-- 175
N D L L F+ I ++ KP+
Sbjct: 122 NID--RNEFKLSNAKLGVEFDHI-----------------------ITAQDVGSYKPNPN 156
Query: 176 -LEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTV 214
+ A+ A ++ K + +S + A AGL +
Sbjct: 157 NFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-07
Identities = 19/124 (15%), Positives = 42/124 (33%), Gaps = 28/124 (22%)
Query: 117 TNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSL 176
+ + +VL L D F+ + + + + KP
Sbjct: 117 SASPLHMLEKVLTMFDLRDSFDALAS-------------AEKLPYS----------KPHP 153
Query: 177 EAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP-----ADHALNS 231
+ VDP + +DS + ++KAA + +++V + A+ L+S
Sbjct: 154 QVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 213
Query: 232 IHNI 235
+ +
Sbjct: 214 LTEL 217
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 1e-06
Identities = 32/231 (13%), Positives = 66/231 (28%), Gaps = 26/231 (11%)
Query: 7 TTAANYECLLFDLDDTLYPLS----TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR 62
+ A +L D++ T P++ F N++E++ H +E E + L +
Sbjct: 5 SVPAEVTVILLDIEGTTTPIAFVKDILFPYI-EENVKEYLQTH--WEEEECQQDVSLLRK 61
Query: 63 EHG----TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---- 114
+ A D+ + + + + L Q +
Sbjct: 62 QAEEDAHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAA 121
Query: 115 -------IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD--GIENNSFS 165
AD A+ G++ E + D + + F
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFD 181
Query: 166 SNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
+ K E+ +F D R ++A+ A +H +V
Sbjct: 182 TKIGH--KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVV 230
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 46.7 bits (112), Expect = 1e-06
Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 84/234 (35%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRRN-----------------IEEFMSQHLHID 49
+ + FDLD D+ + F + +E + L
Sbjct: 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCL--S 60
Query: 50 ESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY-------EKLKPDPVL 102
+ ++ +++YR + Y+ + A + E+L
Sbjct: 61 KDQISEA-VQIYRSY-----------YK-AKGIYEA-----QLFPQIIDLLEELS----- 97
Query: 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162
+ L I T D A ++ L + F+GI P
Sbjct: 98 SSYPLY------ITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPH------------- 138
Query: 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
K + I A++ + P++ I D+ ++ A+ G+ + +
Sbjct: 139 ----------KA--DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAI 180
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 46.2 bits (109), Expect = 2e-06
Identities = 30/203 (14%), Positives = 54/203 (26%), Gaps = 68/203 (33%)
Query: 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA 73
+FDLD TL+P ++ + + + R LY E + L++
Sbjct: 29 LAVFDLDYTLWPFWVDTHV--DPPFHKSSDGTVRDRRGQDVR----LYPEVPEVLKRLQS 82
Query: 74 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 133
+G + R ++ + A ++L L
Sbjct: 83 LGV-----------------------------PGAAASR-----TSEIEGANQLLELFDL 108
Query: 134 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKT 193
F I P + E + + +
Sbjct: 109 FRYF----VHREIYP------------------------GSKITHFERLQQKTGIPFSQM 140
Query: 194 IFFDDSARNIASAKAAGLHTVIV 216
IFFDD RNI G+ + +
Sbjct: 141 IFFDDERRNIVDVSKLGVTCIHI 163
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 2e-06
Identities = 37/204 (18%), Positives = 69/204 (33%), Gaps = 44/204 (21%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHL---HIDESEVPRMCLELYREHGTTMAGL 71
L FD+ T+ ST + +E + +++ E+ ++ L L
Sbjct: 4 LAFDIFGTVLDTSTVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLR--------YI-L 54
Query: 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLL-LSMPQRKIIFTNADQKHAMEVLGR 130
K G E DE ++ LK + L +S +N + L R
Sbjct: 55 KVRGEESKFDEELNK------WKNLKAYEDTKYLKEISEIAEVYALSNGSINEVKQHLER 108
Query: 131 LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 190
GL F+GI E++ KPS + + + ++
Sbjct: 109 NGLLRYFKGIFSAESVK-----------------------EYKPSPKVYKYFLD--SIGA 143
Query: 191 KKTIFFDDSARNIASAKAAGLHTV 214
K+ +A ++ AK AG+ ++
Sbjct: 144 KEAFLVSSNAFDVIGAKNAGMRSI 167
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 45.7 bits (108), Expect = 5e-06
Identities = 37/248 (14%), Positives = 61/248 (24%), Gaps = 46/248 (18%)
Query: 1 MDTMGRTTAANYECLLFDLD----DT--LYPLSTGFNLACRRNIE---EFMSQHLHIDES 51
M A E L+ D D L P+ L + IE + + ++S
Sbjct: 3 MLKANVFCAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKS 62
Query: 52 EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPY------EKLKPDPVLRNL 105
E R L R A L G + ++ P ++ + P + +
Sbjct: 63 EHIRRMLGNSR---IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEV 119
Query: 106 LLSMPQRKI---IFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIEN 161
+ + I T L + + +
Sbjct: 120 FDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVRG------------ 167
Query: 162 NSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220
+P + V I DD+ I AG+ TV V S
Sbjct: 168 -----------RPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSG 216
Query: 221 PVPPADHA 228
D
Sbjct: 217 NEVGLDRE 224
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 6e-06
Identities = 39/244 (15%), Positives = 71/244 (29%), Gaps = 60/244 (24%)
Query: 8 TAANYECLLFDLDDTLYPLSTGFNLACRRN-----IEEFMSQHLHIDESEVPRMCLELYR 62
+ + + +FD+D TL + A R E+ + HL ++
Sbjct: 2 SLSEIKHWVFDMDGTL--TIAVHDFAAIREALSIPAEDDILTHLAALPADESAAKHAWLL 59
Query: 63 EHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNA 119
EH +A + +P P L+ + R I T
Sbjct: 60 EHERDLA------------------------QGSRPAPGAVELVRELAGRGYRLGILTRN 95
Query: 120 DQKHAMEVLGRLGLEDCFEG-IICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEA 178
++ A L +GL DCF + P KP
Sbjct: 96 ARELAHVTLEAIGLADCFAEADVLGRDEAPP-----------------------KPHPGG 132
Query: 179 IETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIHNIK 236
+ +V P + + D ++ +AAG TV+V + D ++
Sbjct: 133 LLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLR 192
Query: 237 EAIP 240
+ +
Sbjct: 193 DLLS 196
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 6e-06
Identities = 27/221 (12%), Positives = 58/221 (26%), Gaps = 38/221 (17%)
Query: 11 NYECLLFDLD----DTLYPLSTGFNLACRR-----NIEEFMSQHLHIDESEVPRMCLELY 61
+ +LFD+D A +D + + + +
Sbjct: 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVG 62
Query: 62 REHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIF----T 117
E + + A + E + +R LL ++ R + T
Sbjct: 63 LERAEIADKFDKAK-----ETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLT 117
Query: 118 NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLE 177
+ L G++ F + R + +LE
Sbjct: 118 GNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPH-------------------IALE 158
Query: 178 AIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218
+ AN P + + D+ +I A+ ++ V +
Sbjct: 159 RAR-RMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVAT 198
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-05
Identities = 36/268 (13%), Positives = 78/268 (29%), Gaps = 76/268 (28%)
Query: 30 FNLACRRN---IEEFMSQHLHID----------ESEVPRMCLELYREHGTTMAGLKAVGY 76
F + +++F+ + L I+ E P M +Y E +
Sbjct: 68 FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYN------ 121
Query: 77 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM-PQRKIIFTNADQKHAM---------- 125
DN F K +L+P LR LL + P + ++ +
Sbjct: 122 --DNQVF-----AKYNVSRLQPYLKLRQALLELRPAKNVLI------DGVLGSGKTWVAL 168
Query: 126 EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN--NSFSSNQRILCKPS------LE 177
+V ++ + I + + P + ++ N S +
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIH 228
Query: 178 AIETAIR--------------IANVDPKKTI-FFDDSARNIASAKAAGLHTVIVGSSVPV 222
+I+ +R + NV K F+ S + + + + + + ++
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 223 PPADHALNSIHNIKEAIPEIWEGEGEQL 250
DH ++ E + L
Sbjct: 289 ISLDHHSMTLT----------PDEVKSL 306
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 4e-05
Identities = 29/217 (13%), Positives = 61/217 (28%), Gaps = 65/217 (29%)
Query: 13 ECLLFDLDDTLYP-LSTGFNLACR-----RNI---------------------------- 38
CLL L + FNL+C+ R
Sbjct: 245 NCLL-VLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 39 EEFMSQHLHIDESEVPR-----------MCLELYREHGTTMAGLKAVGYEFDNDEFHAFV 87
+ + ++L ++PR + E R+ T K V D+ +
Sbjct: 304 KSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC----DKLTTII 359
Query: 88 HGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFE 144
+ L+P R + + +F +L + ++ ++ +
Sbjct: 360 --ESSLNVLEPA-EYRKMFDRL----SVF-PPSAHIPTILLSLIWFDVIKSDVMVVVN-K 410
Query: 145 TINPRL---QPADNTDGIENNSFSSNQRILCKPSLEA 178
L QP ++T I + ++ + +L
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHR 447
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 41.3 bits (96), Expect = 1e-04
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
K ++ +R + +F D+ + +A G+ T +
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLA 230
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 3e-04
Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 36/185 (19%)
Query: 71 LKAVGYEFDNDEFHAFVHGKLP--YEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAM 125
+ + +E KL + P L++ + + I + T++
Sbjct: 84 IDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFD 143
Query: 126 EVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIR 184
R F I+ D+ + +++ KP + +
Sbjct: 144 MKTSRHKEFFSLFSHIVL----------GDDPE-VQHG----------KPDPDIFLACAK 182
Query: 185 IANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----ADHALNSIHNIKEA 238
+ P +K + F+D+ + +A AAG+ V+V A LNS+ + +
Sbjct: 183 RFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQ-- 240
Query: 239 IPEIW 243
PE++
Sbjct: 241 -PELF 244
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 39.4 bits (91), Expect = 6e-04
Identities = 29/172 (16%), Positives = 50/172 (29%), Gaps = 19/172 (11%)
Query: 5 GRTTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH 64
T + LFD D+TL + M + + + + L E
Sbjct: 4 ATTATPHDIVFLFDCDNTLL----DNDHVLADLRAHMMREFGAQNSARYWEIFETLRTEL 59
Query: 65 G--TTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPD--PVLRNLL--LSMPQRKIIFTN 118
G + L+ E D + L P N L L +I ++
Sbjct: 60 GYADYLGALQRYRLEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARGPTVILSD 119
Query: 119 ADQKHAMEVLGRLGLEDCFEGIIC--------FETINPRLQPADNTDGIENN 162
D + R GL D EG + + + PA + +++
Sbjct: 120 GDVVFQPRKIARSGLWDEVEGRVLIYIHKELMLDQVMECY-PARHYVMVDDK 170
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 265 | |||
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.97 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.96 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 99.96 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.96 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.96 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.96 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 99.96 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.96 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.96 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 99.96 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.95 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.95 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 99.95 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.95 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.95 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 99.95 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 99.95 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.95 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.95 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.95 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.95 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.95 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.95 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.95 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.95 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.95 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.95 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.95 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.95 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.95 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.94 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.94 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.94 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.94 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.94 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.94 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.94 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.94 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.94 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.94 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.93 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.93 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.93 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.93 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.93 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.92 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.92 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.92 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.91 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.91 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.91 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.9 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.9 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.9 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.9 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.9 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.89 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.88 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.88 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.87 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.87 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.87 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.86 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.85 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.85 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.85 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.84 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.83 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.83 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.82 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.82 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.82 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.82 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.81 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.81 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.8 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.8 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.8 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.8 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.8 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.79 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.78 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.78 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.78 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.77 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.76 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.76 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.76 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.75 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.75 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.75 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.75 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.75 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.75 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.75 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.74 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.74 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.74 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.74 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.73 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.72 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.72 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.72 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.72 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.71 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.7 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.69 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.69 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.67 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.67 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.65 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.63 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.63 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.62 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.61 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.61 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.38 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.58 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.51 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.49 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.47 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.46 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.46 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.39 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.39 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.36 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.35 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.34 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.31 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.15 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.13 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.05 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.04 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.97 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 98.84 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 98.76 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.65 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.55 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 98.46 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.38 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.26 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.09 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.07 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 97.99 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.97 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 97.96 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 97.92 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 97.76 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 97.63 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 97.57 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 97.53 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.45 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.25 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.25 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.11 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.0 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.92 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 96.77 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.63 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.53 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 95.91 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.74 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 95.38 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 94.98 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 92.16 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 88.93 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 84.43 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 81.62 |
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=205.98 Aligned_cols=198 Identities=26% Similarity=0.325 Sum_probs=148.0
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHHH
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHAF 86 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 86 (265)
+|+|+||+||||+|+.+.+..++.+ +++.+|.+...... ....+.... ...........+.+...
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRR-----VAESYGKPYTEDLH-----RRIMGVPEREGLPILMEALEIKDSLENFKKR 70 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHH-----HHHHTTCCCCHHHH-----HHHTTSCHHHHHHHHHHHTTCCSCHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhccchhhhhhhhhhcccchhhHHHHHHH
Confidence 5899999999999988888777765 56677776543211 111222211 12223333333333332
Q ss_pred Hhcc---ccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 87 VHGK---LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 87 ~~~~---~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
+.+. .......++||+.++++.+ +.+++++||++...+...++.+|+..+||.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~----------- 139 (216)
T 3kbb_A 71 VHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNG----------- 139 (216)
T ss_dssp HHHHHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSC-----------
T ss_pred HHHHHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCC-----------
Confidence 2221 1123467899999998776 6899999999999999999999999999999999988875
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEE-ECCCCC------CCCCCceecCHh
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVI-VGSSVP------VPPADHALNSIH 233 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~-~~~~~~------~~~a~~~v~~~~ 233 (265)
||+|++|+.+++++|++|++|+||||+.+|+.+|+++||.+++ +.++.. ..+++ .+.++.
T Consensus 140 ------------KP~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~-~i~~~~ 206 (216)
T 3kbb_A 140 ------------KPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAV-ALVKPE 206 (216)
T ss_dssp ------------TTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCS-EEECGG
T ss_pred ------------cccHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCc-EECCHH
Confidence 9999999999999999999999999999999999999999985 666654 23344 455789
Q ss_pred HHHHHHHHHh
Q 024578 234 NIKEAIPEIW 243 (265)
Q Consensus 234 el~~~l~~~~ 243 (265)
++.+.|++++
T Consensus 207 eli~~l~eLL 216 (216)
T 3kbb_A 207 EILNVLKEVL 216 (216)
T ss_dssp GHHHHHHHHC
T ss_pred HHHHHHHHHC
Confidence 9999988874
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-28 Score=203.69 Aligned_cols=215 Identities=27% Similarity=0.506 Sum_probs=169.9
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHh
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVH 88 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (265)
..++|+|+||+||||+++...+...+.+++..++.+..+++..........++..++.....+... .......+...+.
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~ 132 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMF-HKVNALEYNRLVD 132 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHT-TSSCHHHHHHHHT
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHH-cCCCHHHHHHHHh
Confidence 456899999999999999988888898888887788888887766655555555565555444322 2345666666665
Q ss_pred cccc-CCCCCCChhHHHHHhcC---CC--cEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 89 GKLP-YEKLKPDPVLRNLLLSM---PQ--RKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 89 ~~~~-~~~~~~~p~~~~~l~~l---~~--~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
.... .....++||+.++|+.+ +. +++|+||+....+...++.+|+..+|+.+++++.....
T Consensus 133 ~~~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~------------- 199 (282)
T 3nuq_A 133 DSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD------------- 199 (282)
T ss_dssp TTSCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS-------------
T ss_pred hhhhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCc-------------
Confidence 5332 24578899999998887 57 99999999999999999999999999999988754321
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCc-eEEEECCCCC------CCCCCceecCHhH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGL-HTVIVGSSVP------VPPADHALNSIHN 234 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~-~~i~~~~~~~------~~~a~~~v~~~~e 234 (265)
...+||++++++.+++++|++| ++|++|||+.+|+.+|+++|+ .++++..+.. ...++++++++.|
T Consensus 200 ------~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~e 273 (282)
T 3nuq_A 200 ------TLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILE 273 (282)
T ss_dssp ------SCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGG
T ss_pred ------ccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHH
Confidence 1125999999999999999999 999999999999999999999 5566665543 4578999999999
Q ss_pred HHHHHHHHh
Q 024578 235 IKEAIPEIW 243 (265)
Q Consensus 235 l~~~l~~~~ 243 (265)
|.++|++++
T Consensus 274 l~~~l~~lf 282 (282)
T 3nuq_A 274 LPHVVSDLF 282 (282)
T ss_dssp GGGTSGGGC
T ss_pred HHHHhhhhC
Confidence 999887654
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=8.2e-29 Score=199.66 Aligned_cols=196 Identities=16% Similarity=0.194 Sum_probs=142.6
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCC-ChHHHHHHHh
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEF-DNDEFHAFVH 88 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 88 (265)
|++|+|+||+||||+|+...+..++.+ .++.+|++...... +....|............. ....+.+.+.
T Consensus 2 M~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (210)
T 2ah5_A 2 TSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKT----IRGFMGPPLESSFATCLSKDQISEAVQIYR 72 (210)
T ss_dssp TTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHH----HHHTSSSCHHHHHHTTSCGGGHHHHHHHHH
T ss_pred CCCCEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHcCccHHHHHHHHcCHHHHHHHHHHHH
Confidence 458999999999999988777776665 44455654322221 1122233222221111111 1122222222
Q ss_pred ccc---cCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 89 GKL---PYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 89 ~~~---~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
+.+ ......++||+.++|+.+ +++++|+||++...++..++.+|+..+|+.+++++ +.
T Consensus 73 ~~~~~~~~~~~~~~~g~~~~l~~L~~~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--~~--------------- 135 (210)
T 2ah5_A 73 SYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS--PE--------------- 135 (210)
T ss_dssp HHHHHTGGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--SS---------------
T ss_pred HHHHHhccCCCCCCCCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC--CC---------------
Confidence 111 123467889999988765 68999999999999999999999999999999887 44
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKE 237 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~~ 237 (265)
+||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.|+.+
T Consensus 136 --------~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 136 --------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp --------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred --------CCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 49999999999999999999999999999999999999999999988653 2469999999999987
Q ss_pred HH
Q 024578 238 AI 239 (265)
Q Consensus 238 ~l 239 (265)
+|
T Consensus 208 ~l 209 (210)
T 2ah5_A 208 YF 209 (210)
T ss_dssp HT
T ss_pred Hh
Confidence 54
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-29 Score=203.52 Aligned_cols=202 Identities=19% Similarity=0.280 Sum_probs=151.9
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHH-HHcCCCCChH
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGL-KAVGYEFDND 81 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~ 81 (265)
.||++|+|+||+||||+++...+..++.+ .++.+|+....... ....+... ..+ ...+.....+
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQ-----VMKTHGLDLSREEA-----YMHEGRTGASTINIVFQRELGKEATQE 89 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCHHHH-----HHHhCCCHHHHHHHHHHHHhCCCCCHH
Confidence 46679999999999999988877777765 44556665433211 11112111 111 1234444444
Q ss_pred HHHHHHhcc---c-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCC
Q 024578 82 EFHAFVHGK---L-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQP 152 (265)
Q Consensus 82 ~~~~~~~~~---~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~ 152 (265)
.+...+... + ......++|++.++++.+ +.+++++||.....+...++. ++..+| +.++++++...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~---- 164 (243)
T 3qxg_A 90 EIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY---- 164 (243)
T ss_dssp HHHHHHHHHHHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----
Confidence 443332211 0 123567899999998877 589999999999888888988 999999 88999988776
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCC
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPAD 226 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~ 226 (265)
+||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...++
T Consensus 165 -------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad 225 (243)
T 3qxg_A 165 -------------------GKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGAD 225 (243)
T ss_dssp -------------------CTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCS
T ss_pred -------------------CCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCC
Confidence 49999999999999999999999999999999999999999999988764 24799
Q ss_pred ceecCHhHHHHHHHHHh
Q 024578 227 HALNSIHNIKEAIPEIW 243 (265)
Q Consensus 227 ~~v~~~~el~~~l~~~~ 243 (265)
++++++.||.++|.++.
T Consensus 226 ~v~~s~~el~~~l~~li 242 (243)
T 3qxg_A 226 LLFPSMQTLCDSWDTIM 242 (243)
T ss_dssp EEESCHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHhhh
Confidence 99999999999998864
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.6e-29 Score=203.60 Aligned_cols=204 Identities=16% Similarity=0.262 Sum_probs=152.0
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HH-HHcCCCCChH
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GL-KAVGYEFDND 81 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~ 81 (265)
.++++|+|+||+||||+++...+..++.+ .++.+|+....... ....+.... .+ ...+...+.+
T Consensus 19 ~~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~g~~~~~~~~~~~~~~~~~~~~~~ 88 (247)
T 3dv9_A 19 ESIDLKAVLFDMDGVLFDSMPNHAESWHK-----IMKRFGFGLSREEA-----YMHEGRTGASTINIVSRRERGHDATEE 88 (247)
T ss_dssp SCCCCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHTTTSCHHHHHHHHHHHHHSSCCCHH
T ss_pred CCCCCCEEEECCCCccCcCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhCCChHHHHHHHHHHhcCCCCCHH
Confidence 35678999999999999988777777765 44556665433211 111122111 11 1234444444
Q ss_pred HHHHHHhcc---c-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCC
Q 024578 82 EFHAFVHGK---L-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQP 152 (265)
Q Consensus 82 ~~~~~~~~~---~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~ 152 (265)
.+...+... + ......++||+.++++.+ +.+++|+||+....+...++. ++..+| +.++++++.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~---- 163 (247)
T 3dv9_A 89 EIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY---- 163 (247)
T ss_dssp HHHHHHHHHHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS----
T ss_pred HHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC----
Confidence 443332211 1 123467889999998877 589999999999988888998 999999 88999988776
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCC
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPAD 226 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~ 226 (265)
+||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...++
T Consensus 164 -------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad 224 (247)
T 3dv9_A 164 -------------------GKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGAN 224 (247)
T ss_dssp -------------------CTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCS
T ss_pred -------------------CCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCC
Confidence 49999999999999999999999999999999999999999999988754 35899
Q ss_pred ceecCHhHHHHHHHHHhcC
Q 024578 227 HALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 227 ~~v~~~~el~~~l~~~~~~ 245 (265)
++++++.||.++|.++.+.
T Consensus 225 ~v~~~~~el~~~l~~~~~~ 243 (247)
T 3dv9_A 225 LLFHSMPDFNKNWETLQSA 243 (247)
T ss_dssp EEESSHHHHHHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHH
Confidence 9999999999999988754
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=195.44 Aligned_cols=204 Identities=22% Similarity=0.236 Sum_probs=155.5
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHH-H----HHHHHHh--cc----------cHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRM-C----LELYREH--GT----------TMAGL 71 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~--~~----------~~~~~ 71 (265)
||++|+|+||+||||+++...+..++.+ .++.+|++....... . ......+ +. .....
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRL-----LFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALL 78 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence 4678999999999999987777776665 455567664332111 1 1111111 00 01123
Q ss_pred HHcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCC
Q 024578 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 149 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~ 149 (265)
...+.......+...+.+... ....++|++.++++.++ .+++++||+....+...++.+++..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~ 157 (238)
T 3ed5_A 79 KEYGYEADGALLEQKYRRFLE-EGHQLIDGAFDLISNLQQQFDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTGFQ 157 (238)
T ss_dssp HHTTCCCCHHHHHHHHHHHHT-TCCCBCTTHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTTSC
T ss_pred HHcCCCCcHHHHHHHHHHHHH-hcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccCCC
Confidence 445555555555555544332 45788999999988774 789999999999999999999999999999999987764
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcC-CCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----CC
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN-VDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VP 223 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg-~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~~ 223 (265)
||++.+++.+++++| ++|++|++|||+. +|+.+|+.+|+.+++++++.. +.
T Consensus 158 -----------------------kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~ 214 (238)
T 3ed5_A 158 -----------------------KPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEI 214 (238)
T ss_dssp -----------------------TTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCC
T ss_pred -----------------------CCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccC
Confidence 999999999999999 9999999999998 999999999999999988643 56
Q ss_pred CCCceecCHhHHHHHHHH
Q 024578 224 PADHALNSIHNIKEAIPE 241 (265)
Q Consensus 224 ~a~~~v~~~~el~~~l~~ 241 (265)
.++++++++.||.++|..
T Consensus 215 ~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 215 IPTYEIRKLEELYHILNI 232 (238)
T ss_dssp CCSEEESSGGGHHHHHTC
T ss_pred CCCeEECCHHHHHHHHHh
Confidence 799999999999988754
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.7e-29 Score=206.55 Aligned_cols=201 Identities=21% Similarity=0.286 Sum_probs=142.0
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhccc----HHHH-HHcCC--CCChH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT----MAGL-KAVGY--EFDND 81 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~--~~~~~ 81 (265)
..|+|+|+||+||||+||.+.+..++.+ +++.+|++...... . ...+.. ...+ ..... .....
T Consensus 23 ~~MIKaViFDlDGTLvDs~~~~~~a~~~-----~~~~~g~~~~~~~~--~---~~~g~~~~~~~~~~~~~~~~~~~~~~~ 92 (250)
T 4gib_A 23 NAMIEAFIFDLDGVITDTAYYHYMAWRK-----LAHKVGIDIDTKFN--E---SLKGISRMESLDRILEFGNKKYSFSEE 92 (250)
T ss_dssp -CCCCEEEECTBTTTBCCHHHHHHHHHH-----HHHTTTCCCCTTGG--G---GTTTCCHHHHHHHHHHHTTCTTTSCHH
T ss_pred cchhheeeecCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH--H---HHhCcchHHHHHHhhhhhcCCCCCCHH
Confidence 4579999999999999987776666655 56667765332100 0 000100 0000 00111 11111
Q ss_pred H-------HHHHHhccc-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCC
Q 024578 82 E-------FHAFVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRL 150 (265)
Q Consensus 82 ~-------~~~~~~~~~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~ 150 (265)
. ....+.... ......++||+.++++.+ +.+++++|+. ......++.+|+.++||.++++++.+..
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~--~~~~~~L~~~gl~~~Fd~i~~~~~~~~~- 169 (250)
T 4gib_A 93 EKVRMAEEKNNYYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSAS--KNAINVLNHLGISDKFDFIADAGKCKNN- 169 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSC--TTHHHHHHHHTCGGGCSEECCGGGCCSC-
T ss_pred HHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHhccccccccccc--chhhhHhhhcccccccceeecccccCCC-
Confidence 1 111111100 123456789999998877 4666665554 3456789999999999999999998875
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceec
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN 230 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~ 230 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++++.+....||++++
T Consensus 170 ----------------------KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~~~~~~ad~vi~ 227 (250)
T 4gib_A 170 ----------------------KPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNYENLKKANLVVD 227 (250)
T ss_dssp ----------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCTTTTTTSSEEES
T ss_pred ----------------------CCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECChhHhccCCEEEC
Confidence 9999999999999999999999999999999999999999999988777778999999
Q ss_pred CHhHH-HHHHHHHhc
Q 024578 231 SIHNI-KEAIPEIWE 244 (265)
Q Consensus 231 ~~~el-~~~l~~~~~ 244 (265)
++.|| .+.|.+.+.
T Consensus 228 ~l~eL~~~~i~~~~n 242 (250)
T 4gib_A 228 STNQLKFEYIQEKYN 242 (250)
T ss_dssp SGGGCCHHHHHHHHH
T ss_pred ChHhCCHHHHHHHHH
Confidence 99998 677776653
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-28 Score=198.25 Aligned_cols=200 Identities=17% Similarity=0.191 Sum_probs=148.5
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHH-HHHHHHHHHHhCCCChhhHH-----HHHHHHHHHhcccHHHHHHcCCCCChH
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLAC-RRNIEEFMSQHLHIDESEVP-----RMCLELYREHGTTMAGLKAVGYEFDND 81 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (265)
.|+++|+|+||+||||+++...+..++ .+ .++..|.+..... .....+....+...... ..
T Consensus 21 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~ 87 (231)
T 3kzx_A 21 SMKQPTAVIFDWYNTLIDTSINIDRTTFYQ-----VLDQMGYKNIDLDSIPNSTIPKYLITLLGKRWKEA--------TI 87 (231)
T ss_dssp CCCCCSEEEECTBTTTEETTSSCCHHHHHH-----HHHHTTCCCCCCTTSCTTTHHHHHHHHHGGGHHHH--------HH
T ss_pred ccCCCCEEEECCCCCCcCCchhHHHHHHHH-----HHHHcCCCHHHHHHHhCccHHHHHHHHhCchHHHH--------HH
Confidence 466799999999999999888887777 65 3444444321100 00011111112111111 12
Q ss_pred HHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCC
Q 024578 82 EFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDG 158 (265)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~ 158 (265)
.+...+..........++|++.++++.+ +.+++|+||.....+...++.+++..+|+.++++++.+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~--------- 158 (231)
T 3kzx_A 88 LYENSLEKSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTI--------- 158 (231)
T ss_dssp HHHHHHHHCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSCC---------
T ss_pred HHHHHHhhhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCCC---------
Confidence 2333333122235678899999998877 5899999999999999999999999999999999987764
Q ss_pred cccCcCCcCcccCCCCCHHHHHHHHHHcCCCCC-cEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHH
Q 024578 159 IENNSFSSNQRILCKPSLEAIETAIRIANVDPK-KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKE 237 (265)
Q Consensus 159 ~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~-~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~ 237 (265)
||++++++.+++++|++|+ ++++|||+.+|+.+|+++|+.++++.++.. ..+++++.++.||.+
T Consensus 159 --------------Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-~~~~~~~~~~~el~~ 223 (231)
T 3kzx_A 159 --------------KPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-IKDILSFKNFYDIRN 223 (231)
T ss_dssp --------------TTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC------CCEEESSHHHHHH
T ss_pred --------------CCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-CCCceeeCCHHHHHH
Confidence 9999999999999999999 999999999999999999999999976644 578899999999999
Q ss_pred HHHHHhc
Q 024578 238 AIPEIWE 244 (265)
Q Consensus 238 ~l~~~~~ 244 (265)
+|.++++
T Consensus 224 ~l~~~l~ 230 (231)
T 3kzx_A 224 FICQLIN 230 (231)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9998864
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-28 Score=196.61 Aligned_cols=201 Identities=19% Similarity=0.249 Sum_probs=149.3
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChH-------H
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDND-------E 82 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 82 (265)
+|+|+|+||+||||+++...+..++.+ .++..|.+...... +....|................ .
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (226)
T 3mc1_A 2 SLYNYVLFDLDGTLTDSAEGITKSVKY-----SLNKFDIQVEDLSS----LNKFVGPPLKTSFMEYYNFDEETATVAIDY 72 (226)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHTTTCCCSCGGG----GGGGSSSCHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHcCCCCCCHHH----HHHHhCcCHHHHHHHHhCCCHHHHHHHHHH
Confidence 468999999999999988777777765 45556665321111 0111122111110000011111 1
Q ss_pred HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 83 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+...+.+. ......++||+.++++.+ +.+++|+|++....++..++.+++..+|+.+++++..+.
T Consensus 73 ~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------- 140 (226)
T 3mc1_A 73 YRDYFKAK-GMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLDGK----------- 140 (226)
T ss_dssp HHHHHTTT-GGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSS-----------
T ss_pred HHHHHHHh-CcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCCCC-----------
Confidence 22222221 224568899999999888 589999999999999999999999999999999988776
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHh
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 233 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~ 233 (265)
+||++.+++.+++++|++|++|++|||+.||+.||+.+|+.++++.++.. +..+++++.++.
T Consensus 141 ------------~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~ 208 (226)
T 3mc1_A 141 ------------LSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVD 208 (226)
T ss_dssp ------------SCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHH
T ss_pred ------------CCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHH
Confidence 49999999999999999999999999999999999999999999997754 367999999999
Q ss_pred HHHHHHHHHh
Q 024578 234 NIKEAIPEIW 243 (265)
Q Consensus 234 el~~~l~~~~ 243 (265)
||.+++.+.-
T Consensus 209 el~~~~~~~~ 218 (226)
T 3mc1_A 209 ELHKKILELR 218 (226)
T ss_dssp HHHHHHHTC-
T ss_pred HHHHHHHHHh
Confidence 9999877554
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=200.35 Aligned_cols=205 Identities=16% Similarity=0.089 Sum_probs=150.2
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 83 (265)
|+++|+|+||+||||+++...+..++.+ .++..|++..... +....+.... .....+...+...+
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 72 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKE-----ALDAENIPLAMWR-----IHRKIGMSGGLMLKSLSRETGMSITDEQA 72 (233)
T ss_dssp --CCCEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTSCHHHHHHHHHHC----CCHHHH
T ss_pred CCcCcEEEEcCCCccccChHHHHHHHHH-----HHHHcCCCCCHHH-----HHHHcCCcHHHHHHHHHHhcCCCCCHHHH
Confidence 4578999999999999987776666665 4555666543321 1112233211 11222333333332
Q ss_pred HHHHh---ccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 84 HAFVH---GKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 84 ~~~~~---~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
..... +.+ ......++|++.++++.+ +.+++|+|++....++..++.+++..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~------- 145 (233)
T 3s6j_A 73 ERLSEKHAQAYERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVSY------- 145 (233)
T ss_dssp HHHHHHHHHHHHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSSC-------
T ss_pred HHHHHHHHHHHHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCCC-------
Confidence 22211 110 123467889999998877 589999999999999999999999999999999998776
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCcee
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHAL 229 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v 229 (265)
+||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...+++++
T Consensus 146 ----------------~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~ 209 (233)
T 3s6j_A 146 ----------------GKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVY 209 (233)
T ss_dssp ----------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEE
T ss_pred ----------------CCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEE
Confidence 49999999999999999999999999999999999999999999987643 34699999
Q ss_pred cCHhHHHHHHHHHhcCC
Q 024578 230 NSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 230 ~~~~el~~~l~~~~~~~ 246 (265)
+++.||.++|.+.-..+
T Consensus 210 ~~~~el~~~l~~~~~~~ 226 (233)
T 3s6j_A 210 EDPLDLLNHLDEIASRE 226 (233)
T ss_dssp SSHHHHHHTGGGTCC--
T ss_pred CCHHHHHHHHHHHhhhc
Confidence 99999999887665443
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=196.76 Aligned_cols=201 Identities=17% Similarity=0.179 Sum_probs=145.9
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCCCChHHHHHHH-
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYEFDNDEFHAFV- 87 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 87 (265)
||+|+|+||+||||+++...+..++.+ .++..|.+...... ............. .....+.......+...+
T Consensus 3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (214)
T 3e58_A 3 AMVEAIIFDMDGVLFDTEKYYYDRRAS-----FLGQKGISIDHLPP-SFFIGGNTKQVWENILRDEYDKWDVSTLQEEYN 76 (214)
T ss_dssp -CCCEEEEESBTTTBCCHHHHHHHHHH-----HHHHTTCCCTTSCH-HHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHH
T ss_pred ccccEEEEcCCCCccccHHHHHHHHHH-----HHHHcCCCCCHHHH-HHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHH
Confidence 468999999999999988777777665 44445554322110 0000000111111 112222333333333322
Q ss_pred ---hccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCccc
Q 024578 88 ---HGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 88 ---~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
.+........++|++.++++.+ +.+++++||+....++..++.+++..+|+.++++++.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------------ 144 (214)
T 3e58_A 77 TYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKES------------ 144 (214)
T ss_dssp HHHHHSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSSC------------
T ss_pred HHHHHhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccCC------------
Confidence 2222112346889999998877 5899999999999999999999999999999999987764
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC---CCCCCCceecCHhHHHHH
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV---PVPPADHALNSIHNIKEA 238 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~---~~~~a~~~v~~~~el~~~ 238 (265)
||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.+++++++. ....++++++++.||.++
T Consensus 145 -----------kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 145 -----------KPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp -----------TTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGGG
T ss_pred -----------CCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999998753 257899999999998765
Q ss_pred H
Q 024578 239 I 239 (265)
Q Consensus 239 l 239 (265)
|
T Consensus 214 i 214 (214)
T 3e58_A 214 I 214 (214)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-27 Score=196.52 Aligned_cols=213 Identities=16% Similarity=0.224 Sum_probs=152.5
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHH-Hhc-------ccHH---------H
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-EHG-------TTMA---------G 70 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~---------~ 70 (265)
..+++|+|+||+||||+|+...+..++.+.+.. +...+|++.. .......... ..+ .... .
T Consensus 14 ~~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~-~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (260)
T 2gfh_A 14 GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEE-AEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEA 91 (260)
T ss_dssp ECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTH-HHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHH
T ss_pred ccccceEEEEcCCCCCCCCHHHHHHHHHHHHHH-HHHhcCCcHH-HHHHHHHHHHHHHhhccccccccHHHHHHHHHHHH
Confidence 456799999999999999887777777664443 3345666542 1111111111 111 1111 1
Q ss_pred HHH-cCCCCChHHHHH---HHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecC
Q 024578 71 LKA-VGYEFDNDEFHA---FVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 71 ~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~ 144 (265)
+.. .+.......... .+.+. ....+.++||+.++|+.+ +.+++|+||++...+...++.+|+..+|+.+++++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~ 170 (260)
T 2gfh_A 92 IQETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG 170 (260)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG
T ss_pred HHHhcCccchHHHHHHHHHHHHHH-HHhcCCCCcCHHHHHHHHHcCCcEEEEECcChHHHHHHHHhcCHHhhhheEEecC
Confidence 111 111112221111 11111 123568899999999887 48899999999999999999999999999999998
Q ss_pred CCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCc-eEEEECCCCC-
Q 024578 145 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGL-HTVIVGSSVP- 221 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~-~~i~~~~~~~- 221 (265)
+.+.. ||+|++|..+++++|++|++|++|||+ .+|+.+|+++|+ .++++.++..
T Consensus 171 ~~~~~-----------------------KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~ 227 (260)
T 2gfh_A 171 EQKEE-----------------------KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRV 227 (260)
T ss_dssp GSSSC-----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCC
T ss_pred CCCCC-----------------------CCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCC
Confidence 87764 999999999999999999999999996 899999999999 7999976532
Q ss_pred ----CCCCCceecCHhHHHHHHHHHhcCC
Q 024578 222 ----VPPADHALNSIHNIKEAIPEIWEGE 246 (265)
Q Consensus 222 ----~~~a~~~v~~~~el~~~l~~~~~~~ 246 (265)
...+++++.++.||.++|..+...+
T Consensus 228 ~~~~~~~~~~~i~~~~el~~~l~~~~~~~ 256 (260)
T 2gfh_A 228 PLTSSPMPHYMVSSVLELPALLQSIDCKV 256 (260)
T ss_dssp CSSCCCCCSEEESSGGGHHHHHHHHTTCC
T ss_pred cCcccCCCCEEECCHHHHHHHHHHHhhCC
Confidence 3568999999999999998776433
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.6e-28 Score=199.11 Aligned_cols=195 Identities=16% Similarity=0.215 Sum_probs=143.4
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCC-hhhHHHHHHHHHHHhcccHHHH----H------------H
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID-ESEVPRMCLELYREHGTTMAGL----K------------A 73 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~------------~ 73 (265)
|+|+|+||+||||+|+...+..++.+ +++.+|++ ....... ....|...... . .
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 73 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNY-----AFEQTGHRHDFTVEDI----KNFFGSGVVVAVTRALAYEAGSSRESLVA 73 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTSCCCCCHHHH----HHHCSSCHHHHHHHHHHHHTTCCHHHHTT
T ss_pred cccEEEEecCCCCccCHHHHHHHHHH-----HHHHcCCCCCCCHHHH----HHhcCccHHHHHHHHHHhccccccccccc
Confidence 58999999999999988877777766 45556665 2221111 11122211100 0 0
Q ss_pred c-------CCCCChHH-------HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc
Q 024578 74 V-------GYEFDNDE-------FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC 136 (265)
Q Consensus 74 ~-------~~~~~~~~-------~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~ 136 (265)
. +....... +.+.+.+. ......++||+.++|+.+ +++++|+||++...++..++.+++. +
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~ 151 (240)
T 2hi0_A 74 FGTKDEQIPEAVTQTEVNRVLEVFKPYYADH-CQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-S 151 (240)
T ss_dssp TTSTTCCCCTTCCHHHHHHHHHHHHHHHHHT-SSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-T
T ss_pred ccccccccCCCCCHHHHHHHHHHHHHHHHHh-hhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-c
Confidence 0 11112222 12222221 124567899999998876 5899999999999999999999998 9
Q ss_pred cceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 137 FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 137 fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
|+.++++++... +||+|+++..+++++|++|++|++|||+.+|+.+|+++|+.++++
T Consensus 152 f~~~~~~~~~~~-----------------------~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v 208 (240)
T 2hi0_A 152 FDFALGEKSGIR-----------------------RKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAV 208 (240)
T ss_dssp CSEEEEECTTSC-----------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred eeEEEecCCCCC-----------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 999999987766 499999999999999999999999999999999999999999999
Q ss_pred CCCCC------CCCCCceecCHhHHHHHH
Q 024578 217 GSSVP------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 217 ~~~~~------~~~a~~~v~~~~el~~~l 239 (265)
.++.. ...+++++.++.|+.+.|
T Consensus 209 ~~~~~~~~~~~~~~a~~~~~~~~el~~~l 237 (240)
T 2hi0_A 209 NWGFRSVPFLQKHGATVIVDTAEKLEEAI 237 (240)
T ss_dssp SSSSSCHHHHHHTTCCCEECSHHHHHHHH
T ss_pred CCCCCchhHHHhcCCCEEECCHHHHHHHh
Confidence 87753 246999999999988765
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-27 Score=198.82 Aligned_cols=210 Identities=14% Similarity=0.070 Sum_probs=152.5
Q ss_pred CCcccCccCCccEEEEecCCCccCCcccH-HHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH------------
Q 024578 2 DTMGRTTAANYECLLFDLDDTLYPLSTGF-NLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM------------ 68 (265)
Q Consensus 2 ~~~~~~~~~~~k~iiFDlDGTLld~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 68 (265)
..|....|+++|+|+||+||||+++...+ ..++.+ .++..|++...... ....+...
T Consensus 4 ~~~~~~~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 73 (277)
T 3iru_A 4 LKANVFCAGPVEALILDWAGTTIDFGSLAPVYAFME-----LFKQEGIEVTQAEA-----REPMGTEKSEHIRRMLGNSR 73 (277)
T ss_dssp CCCCCCCCCCCCEEEEESBTTTBSTTCCHHHHHHHH-----HHHTTTCCCCHHHH-----HTTTTSCHHHHHHHHTTSHH
T ss_pred cccchhhhccCcEEEEcCCCCcccCCcccHHHHHHH-----HHHHhCCCCCHHHH-----HHHhcCchHHHHHHhccchH
Confidence 33444445679999999999999977666 455544 45556665322110 11111110
Q ss_pred ---HHHHHcCCCCChHHHHHHHhc---c---ccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc
Q 024578 69 ---AGLKAVGYEFDNDEFHAFVHG---K---LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC 136 (265)
Q Consensus 69 ---~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~ 136 (265)
......+.......+...+.. . .......++||+.++++.+ +.+++|+||.....+...++.+++..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~ 153 (277)
T 3iru_A 74 IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGY 153 (277)
T ss_dssp HHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccC
Confidence 011223344433333222111 0 0113467899999998877 589999999999999999999998888
Q ss_pred -cceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEE
Q 024578 137 -FEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTV 214 (265)
Q Consensus 137 -fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i 214 (265)
|+.++++++... +||++.+++.+++++|++| ++|++|||+.||+.+|+.+|+.++
T Consensus 154 ~~~~~~~~~~~~~-----------------------~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v 210 (277)
T 3iru_A 154 TPASTVFATDVVR-----------------------GRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTV 210 (277)
T ss_dssp CCSEEECGGGSSS-----------------------CTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEE
T ss_pred CCceEecHHhcCC-----------------------CCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEE
Confidence 899999988776 4999999999999999999 999999999999999999999999
Q ss_pred EECCCCC-----------------------------CCCCCceecCHhHHHHHHHHHhc
Q 024578 215 IVGSSVP-----------------------------VPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 215 ~~~~~~~-----------------------------~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
++.++.. ...++++++++.||.++|..+..
T Consensus 211 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~~~~~ 269 (277)
T 3iru_A 211 GVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVITDVNR 269 (277)
T ss_dssp EECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHHHHHHH
T ss_pred EEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHHHHHHH
Confidence 9998842 24699999999999999987753
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-28 Score=197.73 Aligned_cols=200 Identities=18% Similarity=0.166 Sum_probs=147.3
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHH--cCCCCCh---HH
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA--VGYEFDN---DE 82 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~ 82 (265)
..+++|+|+||+||||+++...+..++.+ .++.+|..... . .+....+........ .+..... ..
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPAAIATITAE-----VLAAMGTAVSR-G----AILSTVGRPLPASLAGLLGVPVEDPRVAE 84 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCH-H----HHHHHTTSCHHHHHHHHHTSCTTSHHHHH
T ss_pred CcccCCEEEEcCCCCCcCCHHHHHHHHHH-----HHHHcCCCCCH-H----HHHHhcCccHHHHHHHHhCCCCCHHHHHH
Confidence 35679999999999999988777777765 44445522211 1 111222322221111 1111111 11
Q ss_pred H----HHHHhccccC--CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCC
Q 024578 83 F----HAFVHGKLPY--EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 153 (265)
Q Consensus 83 ~----~~~~~~~~~~--~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~ 153 (265)
+ ...+.+. .. ....++||+.++++.+ +.+++|+||.....++..++.+++..+|+.++++++.+.
T Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----- 158 (237)
T 4ex6_A 85 ATEEYGRRFGAH-VRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER----- 158 (237)
T ss_dssp HHHHHHHHHHHH-HHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS-----
T ss_pred HHHHHHHHHHHh-cccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC-----
Confidence 1 1111111 11 4467899999998887 588999999999999999999999999999999998776
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCc
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 227 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~ 227 (265)
+||++++++.+++++|++|++|++|||+.+|+.||+.+|+.++++.++.. ...+++
T Consensus 159 ------------------~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~ 220 (237)
T 4ex6_A 159 ------------------GKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADT 220 (237)
T ss_dssp ------------------CTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSE
T ss_pred ------------------CCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCE
Confidence 49999999999999999999999999999999999999999999988754 247999
Q ss_pred eecCHhHHHHHHHH
Q 024578 228 ALNSIHNIKEAIPE 241 (265)
Q Consensus 228 ~v~~~~el~~~l~~ 241 (265)
++.++.||.++|.+
T Consensus 221 v~~~~~el~~~l~~ 234 (237)
T 4ex6_A 221 VVDSFPAAVTAVLD 234 (237)
T ss_dssp EESSHHHHHHHHHH
T ss_pred EECCHHHHHHHHHc
Confidence 99999999998865
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.4e-27 Score=190.03 Aligned_cols=145 Identities=17% Similarity=0.277 Sum_probs=121.7
Q ss_pred HHcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCC
Q 024578 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP 148 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~ 148 (265)
...+.............. +....++|++.++++.+ +.+++++||.+...+...++.+++..+|+.++++++.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~ 150 (230)
T 3um9_A 74 GSLGLALDADGEAHLCSE---YLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVRL 150 (230)
T ss_dssp HHHTCCCCHHHHHHHHHH---TTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTTC
T ss_pred HHcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhccc
Confidence 345555555444433322 25678899999998877 589999999999999999999999999999999988776
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CC
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VP 223 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~ 223 (265)
. ||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. +.
T Consensus 151 ~-----------------------kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~ 207 (230)
T 3um9_A 151 F-----------------------KPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGV 207 (230)
T ss_dssp C-----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSC
T ss_pred C-----------------------CCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccC
Confidence 4 9999999999999999999999999999999999999999999987643 45
Q ss_pred CCCceecCHhHHHHHHHHH
Q 024578 224 PADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 224 ~a~~~v~~~~el~~~l~~~ 242 (265)
.++++++++.||.++|.++
T Consensus 208 ~~~~~~~~~~el~~~l~~~ 226 (230)
T 3um9_A 208 VPDIVVSDVGVLASRFSPV 226 (230)
T ss_dssp CCSEEESSHHHHHHTCCC-
T ss_pred CCcEEeCCHHHHHHHHHHh
Confidence 7999999999999877654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.95 E-value=7.4e-28 Score=199.69 Aligned_cols=201 Identities=15% Similarity=0.075 Sum_probs=152.7
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 83 (265)
+|++|+|+||+||||+++...+..++.+ .++.+|.+...... .....+.... .....+.......+
T Consensus 25 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 95 (259)
T 4eek_A 25 DAPFDAVLFDLDGVLVESEGIIAQVWQS-----VLAERGLHLDLTEI----AMYFTGQRFDGVLAYLAQQHDFVPPPDFL 95 (259)
T ss_dssp CCCCSEEEEESBTTTEECHHHHHHHHHH-----HHHHTTCCCCHHHH----HHHTTTCCHHHHHHHHHHHHCCCCCTTHH
T ss_pred hcCCCEEEECCCCCcccCHHHHHHHHHH-----HHHHhCCCCCHHHH----HHHHhCCCHHHHHHHHHHHcCCCCCHHHH
Confidence 4679999999999999988777766665 45556665432211 1111122211 11233443333222
Q ss_pred ---HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccce-eeecCCCC-CCCCCCCC
Q 024578 84 ---HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG-IICFETIN-PRLQPADN 155 (265)
Q Consensus 84 ---~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~-i~~~~~~~-~~~~~~~~ 155 (265)
.+.+.+.+ ....++|++.++++.+ +.+++|+||.....++..++.+++..+|+. ++++++.+ .
T Consensus 96 ~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~~~------- 166 (259)
T 4eek_A 96 DVLETRFNAAM--TGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVGGR------- 166 (259)
T ss_dssp HHHHHHHHHHH--TTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGTTC-------
T ss_pred HHHHHHHHHHh--ccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcCcC-------
Confidence 22222222 5578899999999887 589999999999999999999999999999 88888776 5
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----------CCCC
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------VPPA 225 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----------~~~a 225 (265)
+||++++++.+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ...+
T Consensus 167 ----------------~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~a 230 (259)
T 4eek_A 167 ----------------GKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGA 230 (259)
T ss_dssp ----------------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTC
T ss_pred ----------------CCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCc
Confidence 49999999999999999999999999999999999999999999987633 2469
Q ss_pred CceecCHhHHHHHHHHHh
Q 024578 226 DHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 226 ~~~v~~~~el~~~l~~~~ 243 (265)
++++.++.||.++|....
T Consensus 231 d~vi~~l~el~~~l~~~~ 248 (259)
T 4eek_A 231 ARVLTSHAELRAALAEAG 248 (259)
T ss_dssp SEEECSHHHHHHHHHHTT
T ss_pred chhhCCHHHHHHHHHhcc
Confidence 999999999999998754
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.4e-28 Score=200.65 Aligned_cols=186 Identities=18% Similarity=0.200 Sum_probs=130.0
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhH----------HHHHHHHHHHhcccHHHHHHcCCCC
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEV----------PRMCLELYREHGTTMAGLKAVGYEF 78 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (265)
+|++|+|+||+||||+||.+.+..++.+ +++.+|++.... ......+....+... ..
T Consensus 2 ~MkiKaViFDlDGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~ 68 (243)
T 4g9b_A 2 VMKLQGVIFDLDGVITDTAHLHFQAWQQ-----IAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEG--------DF 68 (243)
T ss_dssp CCCCCEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGG--------GC
T ss_pred CccCcEEEEcCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhccc--------ch
Confidence 4568999999999999987777777665 555666653221 011111111111100 01
Q ss_pred ChHHHHH-------HHhcc-ccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCC
Q 024578 79 DNDEFHA-------FVHGK-LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETIN 147 (265)
Q Consensus 79 ~~~~~~~-------~~~~~-~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~ 147 (265)
....... .+... .......++||+.++++.+ +++++++|+... ....++.+|+..+|+.++++++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~ 146 (243)
T 4g9b_A 69 NSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLK 146 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccccccccccccc
Confidence 1111110 01000 0112346789999998877 588888888653 567899999999999999999988
Q ss_pred CCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCc
Q 024578 148 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADH 227 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~ 227 (265)
.. ||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.+|+|.++.. .++.
T Consensus 147 ~~-----------------------KP~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~--~ad~ 201 (243)
T 4g9b_A 147 NS-----------------------KPDPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLT--GAQL 201 (243)
T ss_dssp SC-----------------------TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCC--SCSE
T ss_pred CC-----------------------CCcHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCC--cHHH
Confidence 74 9999999999999999999999999999999999999999999998853 3455
Q ss_pred eecCHhH
Q 024578 228 ALNSIHN 234 (265)
Q Consensus 228 ~v~~~~e 234 (265)
.+++..+
T Consensus 202 ~~~~~~~ 208 (243)
T 4g9b_A 202 LLPSTES 208 (243)
T ss_dssp EESSGGG
T ss_pred hcCChhh
Confidence 5555443
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-28 Score=200.43 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=148.9
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 83 (265)
++++|+|+||+||||+++...+..++.+ .++.+|+...... .....+... ......+.......+
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 96 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQE-----ICNRYDKKYSWDV-----KSLVMGKKALEAAQIIIDVLQLPMSKEEL 96 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHH-----HHHHTTCCHHHHHHHHHHHHTCSSCHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHHH-----HHHhcCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 3568999999999999977766666665 4555666533211 111112211 122334544444444
Q ss_pred HHHHhccc--cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhH-hCCccccceeeecC--CCCCCCCCCCC
Q 024578 84 HAFVHGKL--PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFE--TINPRLQPADN 155 (265)
Q Consensus 84 ~~~~~~~~--~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~--~~~~~~~~~~~ 155 (265)
...+.+.+ ......++||+.++++.+ +.+++|+||+....+...+.. +++..+|+.+++++ +...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~------- 169 (250)
T 3l5k_A 97 VEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQH------- 169 (250)
T ss_dssp HHHHHHHHHHHGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCS-------
T ss_pred HHHHHHHHHHHhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccC-------
Confidence 43332211 124578899999998877 589999999998887777754 57888999999988 6666
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCC--CcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCcee
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHAL 229 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~--~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v 229 (265)
+||++++++.+++++|++| ++|++|||+.+|+.+|+++|+.++++.++.. +..+++++
T Consensus 170 ----------------~Kp~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~ 233 (250)
T 3l5k_A 170 ----------------GKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVL 233 (250)
T ss_dssp ----------------CTTSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEEC
T ss_pred ----------------CCCChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEee
Confidence 4999999999999999998 9999999999999999999999999988763 57899999
Q ss_pred cCHhHHHHHHHHH
Q 024578 230 NSIHNIKEAIPEI 242 (265)
Q Consensus 230 ~~~~el~~~l~~~ 242 (265)
+++.||.+.|..+
T Consensus 234 ~sl~el~~~l~~l 246 (250)
T 3l5k_A 234 NSLQDFQPELFGL 246 (250)
T ss_dssp SCGGGCCGGGGTC
T ss_pred cCHHHhhHHHhcC
Confidence 9999987766543
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.1e-27 Score=192.64 Aligned_cols=201 Identities=17% Similarity=0.227 Sum_probs=147.2
Q ss_pred CccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHH-------Hh--cc-----------
Q 024578 7 TTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYR-------EH--GT----------- 66 (265)
Q Consensus 7 ~~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~----------- 66 (265)
+.+|++|+|+||+||||+++...+..++.+ .++..|++........ .+.. .+ +.
T Consensus 10 m~~~~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (254)
T 3umg_A 10 STGRNVRAVLFDTFGTVVDWRTGIATAVAD-----YAARHQLEVDAVAFAD-RWRARYQPSMDAILSGAREFVTLDILHR 83 (254)
T ss_dssp TTCSBCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHHHH-HHHTTHHHHHHHHHTTSSCCCCHHHHHH
T ss_pred CCCCCceEEEEeCCCceecCchHHHHHHHH-----HHHHhcCCCCHHHHHH-HHHHhHHHHHHHHHhcCCCCCCHHHHHH
Confidence 345679999999999999977776666665 4555566543321111 1000 00 00
Q ss_pred -c-HHHHHHcCC---CCChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccce
Q 024578 67 -T-MAGLKAVGY---EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEG 139 (265)
Q Consensus 67 -~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~ 139 (265)
. .......+. ............. +....++|++.++++.++ .+++++||.....+...++.+++. |+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~--f~~ 158 (254)
T 3umg_A 84 ENLDFVLRESGIDPTNHDSGELDELARA---WHVLTPWPDSVPGLTAIKAEYIIGPLSNGNTSLLLDMAKNAGIP--WDV 158 (254)
T ss_dssp HHHHHHHHHTTCCGGGSCHHHHHHHHGG---GGSCCBCTTHHHHHHHHHHHSEEEECSSSCHHHHHHHHHHHTCC--CSC
T ss_pred HHHHHHHHHhCCCcCcCCHHHHHHHHHH---HhhCcCCcCHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHhCCCC--eeE
Confidence 0 011223333 2333333332221 256788999999988874 889999999999999999999986 899
Q ss_pred eeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC--
Q 024578 140 IICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG-- 217 (265)
Q Consensus 140 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~-- 217 (265)
+++++..+.. ||++.+++.+++++|++|++|++|||+.||+.+|+.+|+.+++++
T Consensus 159 ~~~~~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 215 (254)
T 3umg_A 159 IIGSDINRKY-----------------------KPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRP 215 (254)
T ss_dssp CCCHHHHTCC-----------------------TTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCT
T ss_pred EEEcCcCCCC-----------------------CCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecC
Confidence 9988877664 999999999999999999999999999999999999999999998
Q ss_pred --CCC-------CCCCCCceecCHhHHHHHHHH
Q 024578 218 --SSV-------PVPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 218 --~~~-------~~~~a~~~v~~~~el~~~l~~ 241 (265)
++. ....++++++++.||.++|..
T Consensus 216 ~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~ 248 (254)
T 3umg_A 216 VEHGPHQTDDLAPTGSWDISATDITDLAAQLRA 248 (254)
T ss_dssp TTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHH
T ss_pred CcCCCCccccccccCCCceEECCHHHHHHHhcC
Confidence 443 246789999999999998865
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=188.99 Aligned_cols=200 Identities=21% Similarity=0.262 Sum_probs=147.4
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCCh---hhHHHHHHHH-------HHHh--c-c---------c
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE---SEVPRMCLEL-------YREH--G-T---------T 67 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-------~~~~--~-~---------~ 67 (265)
|++|+|+||+||||+++...+..++.+ .++.+|++. ... .....+ +..+ + . .
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEE-----VYQKYSFDRYFDSFD-HYYTLYQRRNTELWLEYGEGKVTKEELNRQRF 76 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHH-----HHHHTTGGGTSSSHH-HHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHH-----HHHHcCCCcccCCHH-HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 468999999999999977766666655 445556543 111 111111 1111 0 0 0
Q ss_pred HHHHHHcCCCCChHHH---HHHHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeee
Q 024578 68 MAGLKAVGYEFDNDEF---HAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 142 (265)
Q Consensus 68 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~ 142 (265)
...+...+.. ..... ...+.+.. .....++|++.++++.+ +.+++|+||+........++.+++..+|+.+++
T Consensus 77 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~ 154 (240)
T 3qnm_A 77 FYPLQAVGVE-DEALAERFSEDFFAII-PTKSGLMPHAKEVLEYLAPQYNLYILSNGFRELQSRKMRSAGVDRYFKKIIL 154 (240)
T ss_dssp HHHHHHTTCC-CHHHHHHHHHHHHHHG-GGCCCBSTTHHHHHHHHTTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEE
T ss_pred HHHHHHcCCC-cHHHHHHHHHHHHHHh-hhcCCcCccHHHHHHHHHcCCeEEEEeCCchHHHHHHHHHcChHhhceeEEE
Confidence 1122333443 22211 12222211 24568899999998877 478999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC
Q 024578 143 FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~ 221 (265)
+++.+.. ||++.+++.+++++|++|++|++|||++ +|+.+|+.+|+.+++++++..
T Consensus 155 ~~~~~~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~ 211 (240)
T 3qnm_A 155 SEDLGVL-----------------------KPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER 211 (240)
T ss_dssp GGGTTCC-----------------------TTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC
T ss_pred eccCCCC-----------------------CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC
Confidence 9987764 9999999999999999999999999996 999999999999999988763
Q ss_pred ---CCCCCceecCHhHHHHHHH
Q 024578 222 ---VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 222 ---~~~a~~~v~~~~el~~~l~ 240 (265)
...|+++++++.|+.++.+
T Consensus 212 ~~~~~~~d~vi~sl~e~~~~~~ 233 (240)
T 3qnm_A 212 TVFPFQPTYHIHSLKELMNLLE 233 (240)
T ss_dssp CCCSSCCSEEESSTHHHHHHTC
T ss_pred CCcCCCCceEECCHHHHHHHHh
Confidence 5689999999999998764
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.3e-27 Score=190.41 Aligned_cols=202 Identities=19% Similarity=0.191 Sum_probs=148.3
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHH---h-----c---------ccHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYRE---H-----G---------TTMAGL 71 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~---------~~~~~~ 71 (265)
++++|+|+||+||||+++...+..++.+ .++..|++...... ...+... . + ......
T Consensus 3 ~~~~k~i~fD~DGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (240)
T 3smv_A 3 LTDFKALTFDCYGTLIDWETGIVNALQP-----LAKRTGKTFTSDEL-LEVFGRNESPQQTETPGALYQDILRAVYDRIA 76 (240)
T ss_dssp GGGCSEEEECCBTTTBCHHHHHHHHTHH-----HHHHHTCCCCHHHH-HHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHH
T ss_pred CccceEEEEeCCCcCcCCchhHHHHHHH-----HHHHhCCCCCHHHH-HHHHHHHHHHHHhhCCCCChhHHHHHHHHHHH
Confidence 4678999999999999977777766665 33445655332211 1111110 0 0 001122
Q ss_pred HHcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCC
Q 024578 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPR 149 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~ 149 (265)
...+.......... +... .....++|++.++++.+ +.+++++||.+.......++. +..+|+.++++++++..
T Consensus 77 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~~l~~~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~~~~~~ 151 (240)
T 3smv_A 77 KEWGLEPDAAEREE-FGTS--VKNWPAFPDTVEALQYLKKHYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQDVGSY 151 (240)
T ss_dssp HHTTCCCCHHHHHH-HHTG--GGGCCBCTTHHHHHHHHHHHSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHHHHTSC
T ss_pred HHhCCCCCHHHHHH-HHHH--HhcCCCCCcHHHHHHHHHhCCeEEEEeCCChhHHHHHHHh--cCCccCEEEEccccCCC
Confidence 34455544433332 2222 24568899999998887 488999999999988888887 45789999999988764
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH---HHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCC------
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETA---IRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSS------ 219 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~---~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~------ 219 (265)
||++.+|+.+ ++++|++|++|++|||+. +|+.+|+.+|+++++++++
T Consensus 152 -----------------------KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~ 208 (240)
T 3smv_A 152 -----------------------KPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGY 208 (240)
T ss_dssp -----------------------TTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC----
T ss_pred -----------------------CCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCC
Confidence 9999999999 899999999999999997 9999999999999999764
Q ss_pred -----C-CCCCCCceecCHhHHHHHHHHHhc
Q 024578 220 -----V-PVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 220 -----~-~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
. ....++++++++.||.++|.+++.
T Consensus 209 g~~~~~~~~~~ad~v~~~~~el~~~l~~~l~ 239 (240)
T 3smv_A 209 GATHVPSRMPNVDFRFNSMGEMAEAHKQALK 239 (240)
T ss_dssp ---CCCSSCCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCcCCCCCCEEeCCHHHHHHHHHHHhc
Confidence 1 147899999999999999988753
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.95 E-value=6.9e-27 Score=192.81 Aligned_cols=200 Identities=15% Similarity=0.198 Sum_probs=147.2
Q ss_pred CccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcc--------------------
Q 024578 7 TTAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGT-------------------- 66 (265)
Q Consensus 7 ~~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 66 (265)
...|++|+|+||+||||+++...+..++.+ .++..|++........ .+......
T Consensus 17 ~~~m~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (254)
T 3umc_A 17 LYFQGMRAILFDVFGTLVDWRSSLIEQFQA-----LERELGGTLPCVELTD-RWRQQYKPAMDRVRNGQAPWQHLDQLHR 90 (254)
T ss_dssp CCSSSCCEEEECCBTTTEEHHHHHHHHHHH-----HHHHSSSCCCHHHHHH-HHHHHTHHHHHHHHTTSSCCCCHHHHHH
T ss_pred ccccCCcEEEEeCCCccEecCccHHHHHHH-----HHHHhcCCCCHHHHHH-HHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 345679999999999999977776666665 5555666533221111 11100000
Q ss_pred --cHHHHHHcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeee
Q 024578 67 --TMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 142 (265)
Q Consensus 67 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~ 142 (265)
....+...+.............. +....++|++.++++.++ .+++++||.....+...++.+++. |+.+++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~ 165 (254)
T 3umc_A 91 QSLEALAGEFGLALDEALLQRITGF---WHRLRPWPDTLAGMHALKADYWLAALSNGNTALMLDVARHAGLP--WDMLLC 165 (254)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHGG---GGSCEECTTHHHHHHHHTTTSEEEECCSSCHHHHHHHHHHHTCC--CSEECC
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHH---HhcCCCCccHHHHHHHHHhcCeEEEEeCCCHHHHHHHHHHcCCC--cceEEe
Confidence 01112233444443333332221 245678999999998874 788999999999999999999986 999999
Q ss_pred cCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEEC----C
Q 024578 143 FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVG----S 218 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~----~ 218 (265)
++..+. +||++.+++.+++++|++|++|++|||+.||+.||+.+|+.+++++ +
T Consensus 166 ~~~~~~-----------------------~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~ 222 (254)
T 3umc_A 166 ADLFGH-----------------------YKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEY 222 (254)
T ss_dssp HHHHTC-----------------------CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTT
T ss_pred eccccc-----------------------CCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCcc
Confidence 887766 4999999999999999999999999999999999999999999998 4
Q ss_pred CCC-------CCCCCceecCHhHHHHHHH
Q 024578 219 SVP-------VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 219 ~~~-------~~~a~~~v~~~~el~~~l~ 240 (265)
+.. ...||++++++.||.++|.
T Consensus 223 g~~~~~~l~~~~~ad~v~~~l~el~~~l~ 251 (254)
T 3umc_A 223 GPGQSQDLAAEQDWDLIASDLLDLHRQLA 251 (254)
T ss_dssp CTTCCSSSSCSSCCSEEESSHHHHHHHHH
T ss_pred CCCCCcccccCCCCcEEECCHHHHHHHhc
Confidence 431 4579999999999998774
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.2e-26 Score=188.86 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=121.3
Q ss_pred HHcCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCC
Q 024578 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP 148 (265)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~ 148 (265)
...+.............. +....++|++.++++.+ +.+++|+||.+...+...++.+++..+|+.++++++.+.
T Consensus 77 ~~~g~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~ 153 (233)
T 3umb_A 77 ARLNLPLGNHAEATLMRE---YACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL 153 (233)
T ss_dssp HHTTCCCCHHHHHHHHHH---HHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC
T ss_pred HHcCCCCCHHHHHHHHHH---HhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC
Confidence 345555554444433322 23567899999998877 489999999999999999999999999999999988776
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CC
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VP 223 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~ 223 (265)
. ||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. +.
T Consensus 154 ~-----------------------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~ 210 (233)
T 3umb_A 154 Y-----------------------KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDV 210 (233)
T ss_dssp C-----------------------TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSC
T ss_pred C-----------------------CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccC
Confidence 4 9999999999999999999999999999999999999999999987653 44
Q ss_pred CCCceecCHhHHHHHHHH
Q 024578 224 PADHALNSIHNIKEAIPE 241 (265)
Q Consensus 224 ~a~~~v~~~~el~~~l~~ 241 (265)
.++++++++.||.++|.+
T Consensus 211 ~~~~v~~~~~el~~~l~~ 228 (233)
T 3umb_A 211 APAAAGHDMRDLLQFVQA 228 (233)
T ss_dssp CCSEEESSHHHHHHHHHC
T ss_pred CCCEEECCHHHHHHHHHH
Confidence 699999999999998764
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-28 Score=195.35 Aligned_cols=199 Identities=20% Similarity=0.245 Sum_probs=145.5
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HH----cCCCCChHHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KA----VGYEFDNDEFHA 85 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~ 85 (265)
++|+|+||+||||+|+...+..++.+ +++.+|++....... ...+|...... .. .........+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEK-----TLKELGLEEYYPDNV----TKYIGGGVRALLEKVLKDKFREEYVEVFRK 72 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHH-----HHHHTTCGGGCCSCG----GGGCSSCHHHHHHHHHGGGCCTHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHH----HHHhCcCHHHHHHHHhChHHHHHHHHHHHH
Confidence 58999999999999988777766665 444555541110000 01112111111 00 011100122333
Q ss_pred HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 86 FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
.+.+.. .....++||+.++|+.+ +.+++|+||+....++..++.+|+..+|+.++++++.+..
T Consensus 73 ~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~------------- 138 (222)
T 2nyv_A 73 HYLENP-VVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFGEK------------- 138 (222)
T ss_dssp HHHHCS-CSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSCTT-------------
T ss_pred HHHHhc-cccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCCCC-------------
Confidence 332221 25678899999998877 5899999999999999999999999999999999887764
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHHHHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~~~l 239 (265)
||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...++++++++.++.+++
T Consensus 139 ----------Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 139 ----------KPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNSQIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp ----------CCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCCCCCSEEESSTTHHHHHH
T ss_pred ----------CCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccccCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999987643 257899999999998877
Q ss_pred HHH
Q 024578 240 PEI 242 (265)
Q Consensus 240 ~~~ 242 (265)
.+.
T Consensus 209 ~~~ 211 (222)
T 2nyv_A 209 DNH 211 (222)
T ss_dssp HTT
T ss_pred HHh
Confidence 543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-26 Score=189.89 Aligned_cols=209 Identities=23% Similarity=0.284 Sum_probs=147.5
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhc----ccHH-HHHHc-CCCCC--hHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG----TTMA-GLKAV-GYEFD--NDE 82 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~-~~~~~--~~~ 82 (265)
|+|+|+||+||||+|+...+..++.+.+..+........................ .... ..... +.... ...
T Consensus 1 m~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (241)
T 2hoq_A 1 MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISA 80 (241)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCCHHHHHH
T ss_pred CccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCccchHHHH
Confidence 3789999999999998877777776655553221122221111111100000000 0011 12222 32221 122
Q ss_pred HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 83 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+...+.+.. .....++||+.++++.+ +.+++|+||+....+...++.+++..+|+.++++++.+..
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~---------- 149 (241)
T 2hoq_A 81 GVIAYHNTK-FAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVK---------- 149 (241)
T ss_dssp HHHHHHHHH-HHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC----------
T ss_pred HHHHHHHHH-HhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCCC----------
Confidence 222222211 13456889999999887 5889999999999999999999999999999999887764
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----C---CCCCceecC
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----V---PPADHALNS 231 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~---~~a~~~v~~ 231 (265)
||++++++.+++++|++|++|++|||+. ||+.+|+.+|+.++++.++.. . ..+++++++
T Consensus 150 -------------Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~ 216 (241)
T 2hoq_A 150 -------------KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDN 216 (241)
T ss_dssp -------------TTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESS
T ss_pred -------------CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECC
Confidence 9999999999999999999999999998 999999999999999977653 1 268999999
Q ss_pred HhHHHHHHHHHh
Q 024578 232 IHNIKEAIPEIW 243 (265)
Q Consensus 232 ~~el~~~l~~~~ 243 (265)
+.||.++|.+..
T Consensus 217 ~~el~~~l~~~~ 228 (241)
T 2hoq_A 217 LESLLEVLARES 228 (241)
T ss_dssp TTHHHHHHHHCC
T ss_pred HHHHHHHHHHHh
Confidence 999999887653
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.6e-27 Score=189.30 Aligned_cols=194 Identities=19% Similarity=0.260 Sum_probs=144.6
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCCCChHHHH----
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYEFDNDEFH---- 84 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---- 84 (265)
|++|+|+||+||||+++...+..++.+ .++.+|...... .+....|.... .+...+.. ...+.
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~ 69 (209)
T 2hdo_A 2 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPA-----QAQKTFPMAAEQAMTELGIA--ASEFDHFQA 69 (209)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHH-----HHHHHTTSCHHHHHHHTTCC--GGGHHHHHH
T ss_pred CcccEEEEcCCCCCcCCHHHHHHHHHH-----HHHHhCCCCCHH-----HHHHHcCCcHHHHHHHcCCC--HHHHHHHHH
Confidence 458999999999999988777766665 455566643221 11222333322 22333332 12221
Q ss_pred HHHhccc-cCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCccc
Q 024578 85 AFVHGKL-PYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 85 ~~~~~~~-~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
..+.... ......++|++.++++.++ .+++|+||+....++..++.+|+..+|+.++++++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~------------ 137 (209)
T 2hdo_A 70 QYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR------------ 137 (209)
T ss_dssp HHHHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCC------------
T ss_pred HHHHHHhhhcccCCcCCCHHHHHHHHHhcCcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCcCCCC------------
Confidence 1111100 1245678999999999885 688999999999999999999999999999999887664
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCHhHHH
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIK 236 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~~el~ 236 (265)
||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.+++++++.. +. +++++.++.||.
T Consensus 138 -----------KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~ 205 (209)
T 2hdo_A 138 -----------KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDIL 205 (209)
T ss_dssp -----------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGG
T ss_pred -----------CCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHH
Confidence 9999999999999999999999999999999999999999999986542 23 999999999987
Q ss_pred HHH
Q 024578 237 EAI 239 (265)
Q Consensus 237 ~~l 239 (265)
++|
T Consensus 206 ~~l 208 (209)
T 2hdo_A 206 ELF 208 (209)
T ss_dssp GGC
T ss_pred Hhh
Confidence 654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-27 Score=190.45 Aligned_cols=202 Identities=16% Similarity=0.194 Sum_probs=148.9
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHH--
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDE-- 82 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~-- 82 (265)
+++|+|+||+||||+++...+...+.+ .++.+|.+....... ....+.... .....+.......
T Consensus 2 ~~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 72 (229)
T 2fdr_A 2 SGFDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEMG----ERFAGMTWKNILLQVESEASIPLSASLLD 72 (229)
T ss_dssp -CCSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHHH----HHHTTCCHHHHHHHHHHHHCCCCCTHHHH
T ss_pred CCccEEEEcCCCCcCccHHHHHHHHHH-----HHHHhCCCCCHHHHH----HHHhCCCHHHHHHHHHHHcCCCCCHHHHH
Confidence 458999999999999987776666655 445566654321111 111122111 1122333322222
Q ss_pred -HHHHHhccccCCCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCcccc-ceeeecCCCCCCCCCCCCCCCcc
Q 024578 83 -FHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 83 -~~~~~~~~~~~~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
+...+.+.. .....++|++.++++.++.+++++|+.....+...++.+++..+| +.+++++..+.
T Consensus 73 ~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~------------ 139 (229)
T 2fdr_A 73 KSEKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA------------ 139 (229)
T ss_dssp HHHHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT------------
T ss_pred HHHHHHHHHh-hcCCccCcCHHHHHHHhCCCEEEEECCChhHHHHHHHhCChHHhccceEEecccccc------------
Confidence 222221111 134678899999999998899999999999999999999999999 88888876544
Q ss_pred cCcCCcCcccCC--CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCC----------CCCCce
Q 024578 161 NNSFSSNQRILC--KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV----------PPADHA 228 (265)
Q Consensus 161 ~~~~~~~~~~~~--kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~----------~~a~~~ 228 (265)
+ ||++.+++.+++++|++|+++++|||+.||+.|++.+|+.++++.++... ..++++
T Consensus 140 -----------~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v 208 (229)
T 2fdr_A 140 -----------DRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETV 208 (229)
T ss_dssp -----------TCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEE
T ss_pred -----------CCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCcee
Confidence 6 99999999999999999999999999999999999999999999886542 139999
Q ss_pred ecCHhHHHHHHHHHhc
Q 024578 229 LNSIHNIKEAIPEIWE 244 (265)
Q Consensus 229 v~~~~el~~~l~~~~~ 244 (265)
+.++.|+.++|..++.
T Consensus 209 ~~~~~el~~~l~~~~~ 224 (229)
T 2fdr_A 209 ISRMQDLPAVIAAMAE 224 (229)
T ss_dssp ESCGGGHHHHHHHHTC
T ss_pred ecCHHHHHHHHHHhhh
Confidence 9999999999988753
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=193.58 Aligned_cols=195 Identities=21% Similarity=0.261 Sum_probs=145.7
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChH-------HH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDND-------EF 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 83 (265)
|+|+|+||+||||+++...+..++.+ .++..|.+... .. +....+................ .+
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~-~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQY-----SLNSFGIKEDL-EN----LDQFIGPPLHDTFKEYYKFEDKKAKEAVEKY 97 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCG-GG----GGGGSSSCHHHHHHHTSCCCHHHHHHHHHHH
T ss_pred hccEEEEecCCcCccCHHHHHHHHHH-----HHHHcCCCCCH-HH----HHHHhCccHHHHHHHHhCCCHHHHHHHHHHH
Confidence 57999999999999988777777765 44555555211 10 0111122211111111122221 12
Q ss_pred HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 84 HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
.+.+.+. ......++||+.++++.+ +.+++|+|++....++..++.+++..+|+.++++++.+..
T Consensus 98 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------- 165 (240)
T 3sd7_A 98 REYFADK-GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDGTR----------- 165 (240)
T ss_dssp HHHHHHT-GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTSCC-----------
T ss_pred HHHHHHh-cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccCCC-----------
Confidence 2222221 124567899999998877 5899999999999999999999999999999999887764
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHh
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 233 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~ 233 (265)
||++.+++.+++++|++ |++|++|||+.+|+.+|+.+|+.++++.++.. +..++++++++.
T Consensus 166 ------------kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~ 233 (240)
T 3sd7_A 166 ------------VNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVE 233 (240)
T ss_dssp ------------CCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSST
T ss_pred ------------CCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHH
Confidence 99999999999999999 99999999999999999999999999997754 367999999999
Q ss_pred HHHHHH
Q 024578 234 NIKEAI 239 (265)
Q Consensus 234 el~~~l 239 (265)
||.++|
T Consensus 234 el~~~l 239 (240)
T 3sd7_A 234 SIKDIL 239 (240)
T ss_dssp THHHHH
T ss_pred HHHHHh
Confidence 998875
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.4e-26 Score=193.03 Aligned_cols=212 Identities=18% Similarity=0.227 Sum_probs=150.4
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHH--HHHHH----HHHHh-------cccH---------H
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP--RMCLE----LYREH-------GTTM---------A 69 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~-------~~~~---------~ 69 (265)
+|+|+||+||||+++...+..++.+ +++.+|+...... ..... +...+ |... .
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 75 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYAT-----KARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQ 75 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHH-----HHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHH
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHH-----HHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHH
Confidence 5799999999999988777776665 5666777533211 11111 11111 1111 1
Q ss_pred HHHHcCCCCChHHH----HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeee
Q 024578 70 GLKAVGYEFDNDEF----HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIIC 142 (265)
Q Consensus 70 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~ 142 (265)
.+...+. .....+ ...+........+.++||+.++|+.+ +.+++|+||.... +...++.+|+..+|+.+++
T Consensus 76 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~ 153 (263)
T 3k1z_A 76 TFHLAGV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLT 153 (263)
T ss_dssp HHHHTTC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEE
T ss_pred HHHHcCC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEe
Confidence 1222333 223332 22222222223457899999998877 5899999998764 6889999999999999999
Q ss_pred cCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC
Q 024578 143 FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~ 221 (265)
+++.+.. ||++.+++.+++++|++|++|++|||+. +|+.+|+++|+.+++++++..
T Consensus 154 ~~~~~~~-----------------------Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~ 210 (263)
T 3k1z_A 154 SEAAGWP-----------------------KPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQA 210 (263)
T ss_dssp HHHHSSC-----------------------TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSC
T ss_pred ecccCCC-----------------------CCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCC
Confidence 9887764 9999999999999999999999999997 999999999999999998764
Q ss_pred C-------CCCCceecCHhHHHHHHHHHhcCChhhhhhh
Q 024578 222 V-------PPADHALNSIHNIKEAIPEIWEGEGEQLEQV 253 (265)
Q Consensus 222 ~-------~~a~~~v~~~~el~~~l~~~~~~~~~~~~~~ 253 (265)
. ..+++++.++.||.++|.++.........+.
T Consensus 211 ~~~~~~~~~~ad~v~~~l~el~~~l~~~~~~~~~~~~~~ 249 (263)
T 3k1z_A 211 LDPVVRDSVPKEHILPSLAHLLPALDCLEGSAENLYFQS 249 (263)
T ss_dssp CCHHHHHHSCGGGEESSGGGHHHHHHHHHHC--------
T ss_pred CchhhcccCCCceEeCCHHHHHHHHHHHHhcCCCCcccc
Confidence 2 2799999999999999999986655544433
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.7e-26 Score=187.84 Aligned_cols=203 Identities=14% Similarity=0.150 Sum_probs=143.0
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHH-HHHHH----HHH---hcccHH-------H-HHHc
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPR-MCLEL----YRE---HGTTMA-------G-LKAV 74 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~---~~~~~~-------~-~~~~ 74 (265)
|+|+|+||+||||+++...+...+.+ +++..|........ ..... ... .|.... . ....
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 77 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQ-----LAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKL 77 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHH-----HHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHh
Confidence 47999999999999977666666655 34444554332110 00000 000 022111 1 1122
Q ss_pred CCCC-ChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCC---hhHHHHHHhHhCCccccceeeecCCCC
Q 024578 75 GYEF-DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLEDCFEGIICFETIN 147 (265)
Q Consensus 75 ~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~---~~~~~~~l~~~~~~~~fd~i~~~~~~~ 147 (265)
+... ....+...+.+.+ ....++|++.++++.+ +.+++++||.. ...+...++.+++..+|+.++++++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~ 155 (235)
T 2om6_A 78 KVDVELVKRATARAILNV--DESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL 155 (235)
T ss_dssp TCCHHHHHHHHHHHHHHC--CGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT
T ss_pred CCCHHHHHHHHHHHHHhc--cccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC
Confidence 3221 0111112221111 2224689999988776 58899999999 888899999999999999999988776
Q ss_pred CCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----C
Q 024578 148 PRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----V 222 (265)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~ 222 (265)
.. ||++++++.+++++|++|++|++|||+. ||+.||+.+|+.+++++++.. .
T Consensus 156 ~~-----------------------kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~ 212 (235)
T 2om6_A 156 SY-----------------------KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKL 212 (235)
T ss_dssp CC-----------------------TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEE
T ss_pred CC-----------------------CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccC
Confidence 64 9999999999999999999999999999 999999999999999987643 2
Q ss_pred CCCCceecCHhHHHHHHHHHh
Q 024578 223 PPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 223 ~~a~~~v~~~~el~~~l~~~~ 243 (265)
..++++++++.||.++|.++.
T Consensus 213 ~~~~~~~~~~~el~~~l~~~~ 233 (235)
T 2om6_A 213 EERGFEIPSIANLKDVIELIS 233 (235)
T ss_dssp ETTEEEESSGGGHHHHHHHTC
T ss_pred CCCcchHhhHHHHHHHHHHHh
Confidence 347899999999999887653
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-27 Score=189.25 Aligned_cols=189 Identities=20% Similarity=0.261 Sum_probs=139.8
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHh
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVH 88 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (265)
++++|+|+||+||||+++...+.. +++..|++...... ..+ ... ....... ...+...+.
T Consensus 3 ~~~~k~iifDlDGTL~d~~~~~~~---------~~~~~g~~~~~~~~--~~~-~~~--~~~~~~~------~~~~~~~~~ 62 (205)
T 3m9l_A 3 LSEIKHWVFDMDGTLTIAVHDFAA---------IREALSIPAEDDIL--THL-AAL--PADESAA------KHAWLLEHE 62 (205)
T ss_dssp GGGCCEEEECTBTTTEEEEECHHH---------HHHHTTCCTTSCHH--HHH-HHS--CHHHHHH------HHHHHHHTH
T ss_pred cccCCEEEEeCCCcCcccHHHHHH---------HHHHhCCCchHHHH--HHH-hcC--ChHHHHH------HHHHHHHHH
Confidence 567899999999999997665542 35556765432111 111 111 1100000 001111111
Q ss_pred ccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 89 GKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 89 ~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
+.. .....++|++.++++.+ +.+++|+||+....++..++.+|+..+| +.+++++. +.
T Consensus 63 ~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~~--------------- 125 (205)
T 3m9l_A 63 RDL-AQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-AP--------------- 125 (205)
T ss_dssp HHH-EEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-SC---------------
T ss_pred HHH-hhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-CC---------------
Confidence 111 24567889999998877 5899999999999999999999999999 77777665 44
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhHHHHHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~el~~~l~~ 241 (265)
+||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. +..++++++++.||.+.++.
T Consensus 126 --------~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 126 --------PKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPDNPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp --------CTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSSCSCGGGCSEECSSHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCCCcccccCCEEeCCHHHHHHHHHh
Confidence 49999999999999999999999999999999999999999999988765 45699999999999998876
Q ss_pred H
Q 024578 242 I 242 (265)
Q Consensus 242 ~ 242 (265)
-
T Consensus 198 ~ 198 (205)
T 3m9l_A 198 E 198 (205)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.2e-26 Score=186.56 Aligned_cols=129 Identities=18% Similarity=0.254 Sum_probs=110.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++|++.++++.+ +.+++|+||.....+...++.+++..+|+.++++++.+..
T Consensus 92 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------------- 150 (232)
T 1zrn_A 92 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY--------------------- 150 (232)
T ss_dssp GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCC---------------------
T ss_pred ccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccCCC---------------------
Confidence 3467889999998876 5899999999999999999999999999999998877664
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCHhHHHHHHHHHhcC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...++++++++.|+.++|.+...+
T Consensus 151 --Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~ 228 (232)
T 1zrn_A 151 --KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELFETAAGK 228 (232)
T ss_dssp --TTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC------
T ss_pred --CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHHHhhccc
Confidence 9999999999999999999999999999999999999999999987643 356899999999999887665433
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=186.99 Aligned_cols=207 Identities=16% Similarity=0.241 Sum_probs=146.7
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHH-----HHHhccc------------HHHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL-----YREHGTT------------MAGLKA 73 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~------------~~~~~~ 73 (265)
|+|+|+||+||||+++...+...... +.+ .++..|++........... ....+.. ......
T Consensus 1 Mik~i~fDlDGTL~d~~~~~~~~~~~-~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 78 (234)
T 3u26_A 1 MIRAVFFDSLGTLNSVEGAAKSHLKI-MEE-VLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEK 78 (234)
T ss_dssp CCCEEEECSTTTTBCHHHHHHHHHHH-HHH-HCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCccccccchhHHHHHH-HHH-HHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHH
Confidence 47999999999999976543332222 222 3455666643322211111 1111111 011222
Q ss_pred cCCCCChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCC
Q 024578 74 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 151 (265)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~ 151 (265)
.+.............. . .....++|++.++++.++ .+++|+||+....+...++.+++..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~~-- 154 (234)
T 3u26_A 79 YGFKYPENFWEISLRM-S-QRYGELYPEVVEVLKSLKGKYHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAGFF-- 154 (234)
T ss_dssp HTCCCCTTHHHHHHHH-H-HHHCCBCTTHHHHHHHHTTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHTBC--
T ss_pred cCchHHHHHHHHHHHH-H-HhhCCcCcCHHHHHHHHHhCCcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccCCC--
Confidence 3332222222111100 0 134678899999988875 788999999999999999999999999999999877664
Q ss_pred CCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----CCCCC
Q 024578 152 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPAD 226 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~~~a~ 226 (265)
||++.+++.+++++|++|++|++|||+. ||+.+|+.+|+.++++.++.. ...++
T Consensus 155 ---------------------kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~ 213 (234)
T 3u26_A 155 ---------------------KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCD 213 (234)
T ss_dssp ---------------------TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCS
T ss_pred ---------------------CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCC
Confidence 9999999999999999999999999998 999999999999999988754 23799
Q ss_pred ceecCHhHHHHHHHHHhc
Q 024578 227 HALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 227 ~~v~~~~el~~~l~~~~~ 244 (265)
++++++.||.++|.++..
T Consensus 214 ~~~~~~~el~~~l~~~~~ 231 (234)
T 3u26_A 214 FIVSDLREVIKIVDELNG 231 (234)
T ss_dssp EEESSTHHHHHHHHHHC-
T ss_pred EeeCCHHHHHHHHHHHhh
Confidence 999999999999988753
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-26 Score=188.26 Aligned_cols=127 Identities=17% Similarity=0.218 Sum_probs=112.2
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++||+.++++.+ +.+++|+||+....+...++.+|+..+|+.++++++.+..
T Consensus 102 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------------- 160 (240)
T 2no4_A 102 KELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIY--------------------- 160 (240)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTCC---------------------
T ss_pred hcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCCC---------------------
Confidence 3467899999998877 5899999999999999999999999999999999887764
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCC-CceecCHhHHHHHHHHHh
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPA-DHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a-~~~v~~~~el~~~l~~~~ 243 (265)
||++.+++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. ...+ +++++++.||.++|.+++
T Consensus 161 --Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 236 (240)
T 2no4_A 161 --KPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLAKNV 236 (240)
T ss_dssp --TTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHHCC--
T ss_pred --CCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999987643 2457 999999999998876554
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=191.08 Aligned_cols=199 Identities=18% Similarity=0.237 Sum_probs=145.6
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHH----cCCCC
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKA----VGYEF 78 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~~ 78 (265)
...++|+|+||+||||+|+...+..++.+ +++.+|++........ ...+.... .+.. .+...
T Consensus 19 ~~~~~k~iiFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~ 89 (243)
T 2hsz_A 19 GMTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVM----TWIGNGADVLSQRAVDWACKQAEKEL 89 (243)
T ss_dssp CCSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHH----HHCSSCHHHHHHHHHHHHHHHHTCCC
T ss_pred CCccCCEEEEcCCCcCCCCHHHHHHHHHH-----HHHHcCCCCCCHHHHH----HHhCchHHHHHHHHhhhhhccccccC
Confidence 45678999999999999987777666655 4556666533222111 11111110 0000 12222
Q ss_pred ChHHH-------HHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCC
Q 024578 79 DNDEF-------HAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINP 148 (265)
Q Consensus 79 ~~~~~-------~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~ 148 (265)
....+ .+.+.... .....++||+.++|+.+ +.+++|+||.....++..++.+|+..+|+.++++++...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~ 168 (243)
T 2hsz_A 90 TEDEFKYFKRQFGFYYGENL-CNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE 168 (243)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS
T ss_pred CHHHHHHHHHHHHHHHHHhc-cccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC
Confidence 22221 22222211 24567889999998877 588999999999999999999999999999999887766
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------C
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------V 222 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~ 222 (265)
. ||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++.. .
T Consensus 169 ~-----------------------Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~ 225 (243)
T 2hsz_A 169 I-----------------------KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQ 225 (243)
T ss_dssp C-----------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGG
T ss_pred C-----------------------CcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhh
Confidence 4 9999999999999999999999999999999999999999999987642 3
Q ss_pred CCCCceecCHhHHHHHH
Q 024578 223 PPADHALNSIHNIKEAI 239 (265)
Q Consensus 223 ~~a~~~v~~~~el~~~l 239 (265)
..+++++.++.+|.++|
T Consensus 226 ~~ad~vi~~~~el~~~l 242 (243)
T 2hsz_A 226 SKPDWIFDDFADILKIT 242 (243)
T ss_dssp GCCSEEESSGGGGGGGT
T ss_pred CCCCEEECCHHHHHHHh
Confidence 46899999999987654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-26 Score=184.52 Aligned_cols=193 Identities=16% Similarity=0.197 Sum_probs=139.9
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhc-ccHH----HHH-HcCCC-CChHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG-TTMA----GLK-AVGYE-FDNDE 82 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~-~~~~~-~~~~~ 82 (265)
||+|+|+||+||||+++...+...+.+. .+.+|+...... .. ...+ .... .+. ..... .....
T Consensus 2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~-----~~~~g~~~~~~~-~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (207)
T 2go7_A 2 MQKTAFIWDLDGTLLDSYEAILSGIEET-----FAQFSIPYDKEK-VR----EFIFKYSVQDLLVRVAEDRNLDVEVLNQ 71 (207)
T ss_dssp --CCEEEECTBTTTEECHHHHHHHHHHH-----HHHHTCCCCHHH-HH----HHHHHSCHHHHHHHHHHHHTCCHHHHHH
T ss_pred CcccEEEEeCCCcccccHHHHHHHHHHH-----HHHcCCCCCHHH-HH----HHHccccHHHHHHHhhchhhccHHHHHH
Confidence 3589999999999999877776666653 334455322211 11 1111 1111 111 11110 00112
Q ss_pred HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 83 FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
+...+.+. ......++|++.++++.+ +.+++++|+....... .++.+++..+|+.++++++.+..
T Consensus 72 ~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~---------- 139 (207)
T 2go7_A 72 VRAQSLAE-KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGFVR---------- 139 (207)
T ss_dssp HHHHHHTT-CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCCCC----------
T ss_pred HHHHHHHh-ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCCCC----------
Confidence 22222222 224567889999998877 5889999999998888 99999999999999998877664
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHH
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 239 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l 239 (265)
||+++.++.+++++|++|+++++|||+.||+.|++.+|+.++++.++. . .+++++.++.|+.++|
T Consensus 140 -------------Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 140 -------------KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-EGNHRIQALADISRIF 204 (207)
T ss_dssp -------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-TTEEECSSTTHHHHHT
T ss_pred -------------CCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-CCCEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999998877 5 8999999999998765
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-27 Score=191.32 Aligned_cols=191 Identities=21% Similarity=0.263 Sum_probs=127.4
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCC--CCChHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGY--EFDNDEF 83 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~~~ 83 (265)
++|+|+||+||||+++...+..++.+ +++.+|++.... .+....|.... .....+. ..+...+
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKH-----IAEQIDIPFDRD-----MNERLKGISREESLESILIFGGAETKYTNAEK 70 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHH-----HHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHH-----HHHHcCCCCCHH-----HHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHH
Confidence 37899999999999987777666665 445567663321 11112222211 1222333 2333222
Q ss_pred HH-------HHhccc-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 84 HA-------FVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 84 ~~-------~~~~~~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
.. .+.+.. ......++||+.++++.+ +.+++|+||+.. ....++.+++..+|+.++++++.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~~~---- 144 (233)
T 3nas_A 71 QELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTLAK---- 144 (233)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC---------
T ss_pred HHHHHHHHHHHHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhCCC----
Confidence 21 111111 012234799999998877 589999999855 7889999999999999999988776
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCH
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSI 232 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~ 232 (265)
+||++++++.+++++|++|++|++|||+.||+.||+++|+.++++++......|+++++++
T Consensus 145 -------------------~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~ad~v~~s~ 205 (233)
T 3nas_A 145 -------------------GKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQT 205 (233)
T ss_dssp -----------------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-------CSEECSSG
T ss_pred -------------------CCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCccccccCCEEeCCh
Confidence 4999999999999999999999999999999999999999999998876655899999999
Q ss_pred hHHH
Q 024578 233 HNIK 236 (265)
Q Consensus 233 ~el~ 236 (265)
.|+.
T Consensus 206 ~el~ 209 (233)
T 3nas_A 206 SDLT 209 (233)
T ss_dssp GGCC
T ss_pred HhCC
Confidence 9875
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.6e-25 Score=183.56 Aligned_cols=202 Identities=11% Similarity=0.090 Sum_probs=144.6
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCCh---hh--HHHHHHHHHHHhcccHHHH---------HHcCC
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDE---SE--VPRMCLELYREHGTTMAGL---------KAVGY 76 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~---------~~~~~ 76 (265)
++|+|+||+||||+|+...+..++.+.+.. ++..|+.. .. ............|.....+ ...+.
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 89 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAI--LSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEA 89 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHH--HTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTT
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHH--HHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCC
Confidence 589999999999999888777777654433 35566654 11 0000001011233332211 12233
Q ss_pred CCChHH---HHHHHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCC
Q 024578 77 EFDNDE---FHAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 151 (265)
Q Consensus 77 ~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~ 151 (265)
...... +...+.+. ......++|++.++++.+ +.+++|+||+....+...++.+++..+|+.++++.
T Consensus 90 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~~------- 161 (251)
T 2pke_A 90 RIEARDIQRIVEIGRAT-LQHPVEVIAGVREAVAAIAADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVVS------- 161 (251)
T ss_dssp CCCHHHHHHHHHHHHHH-HTCCCCBCTTHHHHHHHHHTTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEES-------
T ss_pred CCChHHHHHHHHHHHHH-HhccCCcCccHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeeeC-------
Confidence 333222 22222221 125577899999998876 58899999999999999999999999999988743
Q ss_pred CCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC---------
Q 024578 152 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------- 221 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------- 221 (265)
||++++++.+++++|++|++|++|||+. ||+.+|+.+|+.++++.++..
T Consensus 162 ---------------------kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~ 220 (251)
T 2pke_A 162 ---------------------EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGV 220 (251)
T ss_dssp ---------------------CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-----------
T ss_pred ---------------------CCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCcccccccccc
Confidence 9999999999999999999999999999 999999999999999976542
Q ss_pred -CCCCCc-eecCHhHHHHHHHHHh
Q 024578 222 -VPPADH-ALNSIHNIKEAIPEIW 243 (265)
Q Consensus 222 -~~~a~~-~v~~~~el~~~l~~~~ 243 (265)
...+++ +++++.||.++|..+.
T Consensus 221 ~~~~~~~~~i~~~~el~~~l~~~~ 244 (251)
T 2pke_A 221 AADEPRLREVPDPSGWPAAVRALD 244 (251)
T ss_dssp --CCTTEEECSSGGGHHHHHHHHH
T ss_pred ccCCCCeeeeCCHHHHHHHHHHhC
Confidence 246887 9999999999888765
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-25 Score=181.88 Aligned_cols=127 Identities=17% Similarity=0.334 Sum_probs=114.6
Q ss_pred CCCCCChhHHHHHhcC-CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 94 EKLKPDPVLRNLLLSM-PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l-~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
....++||+.++++.+ +.+++|+||.+...+...++.+|+..+|+.++++++.+..
T Consensus 90 ~~~~~~~~~~~~l~~l~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~----------------------- 146 (253)
T 1qq5_A 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF----------------------- 146 (253)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------
T ss_pred hcCCCCccHHHHHHHHcCCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccCCC-----------------------
Confidence 4567899999999887 6889999999999999999999999999999999887764
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC-----------------------CC-----CCCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS-----------------------SV-----PVPP 224 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~-----------------------~~-----~~~~ 224 (265)
||++.+++.+++++|++|++|++|||+.+|+.+|+++|+.++++++ +. ....
T Consensus 147 Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~ 226 (253)
T 1qq5_A 147 KPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA 226 (253)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCC
T ss_pred CCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999999999987 21 1457
Q ss_pred CCceecCHhHHHHHHHHHh
Q 024578 225 ADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 225 a~~~v~~~~el~~~l~~~~ 243 (265)
++++++++.||.++|.++.
T Consensus 227 ~~~~~~~~~el~~~l~~~~ 245 (253)
T 1qq5_A 227 PDFVVPALGDLPRLVRGMA 245 (253)
T ss_dssp CSEEESSGGGHHHHHHHHC
T ss_pred CCeeeCCHHHHHHHHHHhc
Confidence 9999999999999988765
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-25 Score=180.14 Aligned_cols=197 Identities=14% Similarity=0.161 Sum_probs=138.5
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHH---HHhcccHH---------HHHHcCCCCC
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELY---REHGTTMA---------GLKAVGYEFD 79 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~---------~~~~~~~~~~ 79 (265)
+|+|+||+||||+++...+..+..+.+.. +...|.............. ...+.... .....+....
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDL--LKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIA 85 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHH--TGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCC
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCC
Confidence 89999999999999887666665443332 3334422111111111000 11122111 1122233344
Q ss_pred hHHHHH---HHhccccCCCCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCC
Q 024578 80 NDEFHA---FVHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152 (265)
Q Consensus 80 ~~~~~~---~~~~~~~~~~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~ 152 (265)
.+.... .+.+.+ .....++|++.++++.+ + .+++++||+....+...++.+++..+|+.++++.
T Consensus 86 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~-------- 156 (234)
T 3ddh_A 86 ADIIRQIVDLGKSLL-KMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVMS-------- 156 (234)
T ss_dssp HHHHHHHHHHHHHHT-TCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEES--------
T ss_pred HHHHHHHHHHHHHHh-hccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeecC--------
Confidence 433332 222222 25678899999998877 5 8999999999999999999999999999988754
Q ss_pred CCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCC----C-----C
Q 024578 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSV----P-----V 222 (265)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~----~-----~ 222 (265)
||++.+++.+++++|++|++|++|||+. ||+.+|+.+|+.++++.++. . .
T Consensus 157 --------------------kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~ 216 (234)
T 3ddh_A 157 --------------------DKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFA 216 (234)
T ss_dssp --------------------CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCC
T ss_pred --------------------CCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccccc
Confidence 9999999999999999999999999997 99999999999999995442 2 2
Q ss_pred CCCCceecCHhHHHHHH
Q 024578 223 PPADHALNSIHNIKEAI 239 (265)
Q Consensus 223 ~~a~~~v~~~~el~~~l 239 (265)
..++++++++.||.++|
T Consensus 217 ~~~d~v~~~l~el~~~l 233 (234)
T 3ddh_A 217 HERLKQVKRLDDLLSLL 233 (234)
T ss_dssp CTTEEECSSGGGHHHHC
T ss_pred CCCceecccHHHHHHhc
Confidence 34599999999998865
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=185.12 Aligned_cols=203 Identities=17% Similarity=0.168 Sum_probs=142.7
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCC-----
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFD----- 79 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----- 79 (265)
|++|+|+||+||||+|+...+..++.+.+.+. +|.+... . +....|.... .+...+....
T Consensus 2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~----~g~~~~~--~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 71 (234)
T 2hcf_A 2 MSRTLVLFDIDGTLLKVESMNRRVLADALIEV----YGTEGST--G----SHDFSGKMDGAIIYEVLSNVGLERAEIADK 71 (234)
T ss_dssp -CCEEEEECCBTTTEEECTHHHHHHHHHHHHH----HSCCCCC---------CCTTCCHHHHHHHHHHTTTCCHHHHHHH
T ss_pred CcceEEEEcCCCCcccCccchHHHHHHHHHHH----hCCCCcc--c----hhhhcCCChHHHHHHHHHHcCCCcccchhH
Confidence 35899999999999998887777776644331 2332220 0 0001111111 1111121111
Q ss_pred ----hHHHHHHHhccccCCCCCCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCC
Q 024578 80 ----NDEFHAFVHGKLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQ 151 (265)
Q Consensus 80 ----~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~ 151 (265)
...+...+.+........++||+.++++.+ +.+++|+||+....+...++.+++..+|+.++++++....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~-- 149 (234)
T 2hcf_A 72 FDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR-- 149 (234)
T ss_dssp HHHHHHHHHHHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG--
T ss_pred HHHHHHHHHHHHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCcCc--
Confidence 111112222211114457789999988776 4678999999999999999999999999987777765432
Q ss_pred CCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcC--CCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CC
Q 024578 152 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIAN--VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VP 223 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg--~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~ 223 (265)
+||++.+++.+++++| ++|++|++|||+.||+.+|+.+|+.++++.++.. ..
T Consensus 150 --------------------~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~ 209 (234)
T 2hcf_A 150 --------------------NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARH 209 (234)
T ss_dssp --------------------GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTT
T ss_pred --------------------cchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhC
Confidence 3688999999999999 9999999999999999999999999999988754 23
Q ss_pred CCCceecCHhHHHHHHHHHhc
Q 024578 224 PADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 224 ~a~~~v~~~~el~~~l~~~~~ 244 (265)
.+++++.++.||.++|.++..
T Consensus 210 ~a~~v~~~~~el~~~l~~~~~ 230 (234)
T 2hcf_A 210 KPGTLFKNFAETDEVLASILT 230 (234)
T ss_dssp CCSEEESCSCCHHHHHHHHHC
T ss_pred CCCEEeCCHHhHHHHHHHHhc
Confidence 599999999999999988763
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-25 Score=185.16 Aligned_cols=201 Identities=10% Similarity=0.050 Sum_probs=143.8
Q ss_pred CCccEEEEecCCCccCCcc-cHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH---------------HHHHH
Q 024578 10 ANYECLLFDLDDTLYPLST-GFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM---------------AGLKA 73 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 73 (265)
|++|+|+||+||||+++.. .+..++.+ .++.+|+...... +....|... .....
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~-----~l~~~G~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFME-----IFHKRGVAITAEE-----ARKPMGLLKIDHVRALTEMPRIASEWNRV 73 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHH-----HHHTTTCCCCHHH-----HHTTTTSCHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHH-----HHHHcCCCCCHHH-----HHHHhccchHHHHHHhcccHHHHHHHHHH
Confidence 4589999999999999877 66776665 3444565432110 001111110 00112
Q ss_pred cCCCCChHHHHHH---Hhc---cccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-ceeeec
Q 024578 74 VGYEFDNDEFHAF---VHG---KLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICF 143 (265)
Q Consensus 74 ~~~~~~~~~~~~~---~~~---~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~~~ 143 (265)
.+.......+... +.+ ........++|++.++++.+ +.+++++|+.....+...++.+++..+| +.++++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~ 153 (267)
T 1swv_A 74 FRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTP 153 (267)
T ss_dssp HSSCCCHHHHHHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCG
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecC
Confidence 2333333222211 111 11124567889999888776 5889999999999999999998887775 888888
Q ss_pred CCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEEEECCCCC-
Q 024578 144 ETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP- 221 (265)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~- 221 (265)
+.... +||++.++..+++++|++| ++|++|||+.||+.|++.+|+.++++.++..
T Consensus 154 ~~~~~-----------------------~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~ 210 (267)
T 1swv_A 154 DDVPA-----------------------GRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSE 210 (267)
T ss_dssp GGSSC-----------------------CTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTT
T ss_pred CccCC-----------------------CCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCc
Confidence 77665 4999999999999999999 9999999999999999999999999988754
Q ss_pred ----------------------------CCCCCceecCHhHHHHHHHHHh
Q 024578 222 ----------------------------VPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 222 ----------------------------~~~a~~~v~~~~el~~~l~~~~ 243 (265)
...|++++.++.+|.++|..+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~~~ 260 (267)
T 1swv_A 211 LGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIE 260 (267)
T ss_dssp TCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHT
T ss_pred cCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHHHHHh
Confidence 2459999999999999887654
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.93 E-value=2e-26 Score=186.05 Aligned_cols=200 Identities=21% Similarity=0.203 Sum_probs=139.2
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHc--CCCCChHH-----
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV--GYEFDNDE----- 82 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----- 82 (265)
|++|+|+||+||||+++...+...+.+ .++..|........ +....|......... +.. ....
T Consensus 4 M~~k~v~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~ 73 (225)
T 3d6j_A 4 MKYTVYLFDFDYTLADSSRGIVTCFRS-----VLERHGYTGITDDM----IKRTIGKTLEESFSILTGIT-DADQLESFR 73 (225)
T ss_dssp -CCSEEEECCBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHH----HHTTTTSCHHHHHHHHHCCC-CHHHHHHHH
T ss_pred CCCCEEEEeCCCCCCCCHHHHHHHHHH-----HHHHhCCCCCCHHH----HHHHhCCcHHHHHHHHcCCC-CHHHHHHHH
Confidence 458999999999999987777766665 44455554322111 111222222211111 111 1111
Q ss_pred --HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 83 --FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 83 --~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
+...+.+. ......+.|++.++++.+ +.+++++|+.........++.+++..+|+.++++++...
T Consensus 74 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 143 (225)
T 3d6j_A 74 QEYSKEADIY-MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVTH--------- 143 (225)
T ss_dssp HHHHHHHHHH-TGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCSS---------
T ss_pred HHHHHHHHHh-ccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcCC---------
Confidence 11111111 123456789999988776 588999999999999999999999999999998887665
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecC
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNS 231 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~ 231 (265)
+||++.++..+++++|++|+++++|||+.||+.|++.+|+.++++.++.. ...+++++.+
T Consensus 144 --------------~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~ 209 (225)
T 3d6j_A 144 --------------HKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIIST 209 (225)
T ss_dssp --------------CTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESS
T ss_pred --------------CCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECC
Confidence 39999999999999999999999999999999999999999999987653 2248999999
Q ss_pred HhHHHHHHHHHh
Q 024578 232 IHNIKEAIPEIW 243 (265)
Q Consensus 232 ~~el~~~l~~~~ 243 (265)
+.|+.++|+.+.
T Consensus 210 ~~el~~~l~~~~ 221 (225)
T 3d6j_A 210 LGQLISVPEDKS 221 (225)
T ss_dssp GGGGC-------
T ss_pred HHHHHHhhhhhc
Confidence 999999887765
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-26 Score=185.06 Aligned_cols=200 Identities=13% Similarity=0.138 Sum_probs=136.9
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhccc-------------HHHHHHcCCC
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-------------MAGLKAVGYE 77 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 77 (265)
++|+|+||+||||+|+...+..++.+ .+..+|++.... .....+....|.. ...+...+..
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~-~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~ 75 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQ-----VLKDNGYDLDLR-KVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIY 75 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHH-----HHHHTTCCCCHH-HHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCC
T ss_pred CceEEEEcCCCceecccccHHHHHHH-----HHHHhCCCCCHH-HHHHHHHHHhhhccCCCccccccccHHHHHHHcCCC
Confidence 57999999999999988877777665 455667654322 1222222222211 2233444554
Q ss_pred CChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 78 FDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
...+................++||+.++|+.+ +.+++|+||++. .+...++.+|+..+|+.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~~~~----- 149 (220)
T 2zg6_A 76 PSERLVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEIKAV----- 149 (220)
T ss_dssp CCHHHHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-------------
T ss_pred CcHHHHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEeccccCCC-----
Confidence 43333333333222223567899999998877 588999999976 478899999999999999999887764
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh-cHHHHHHcCceEEEECCCCCCCCCCceecCHh
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVPVPPADHALNSIH 233 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~ 233 (265)
||++++++.+++++|++| ++|||+.+ |+.+|+++|+.++++.++......+++++++.
T Consensus 150 ------------------Kp~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~i~~l~ 208 (220)
T 2zg6_A 150 ------------------KPNPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDVRDRVKNLR 208 (220)
T ss_dssp ---------------------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTCCSCBSSHH
T ss_pred ------------------CCCHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCcceEECCHH
Confidence 999999999999999988 99999998 99999999999999976532222267899999
Q ss_pred HHHHHHHHHh
Q 024578 234 NIKEAIPEIW 243 (265)
Q Consensus 234 el~~~l~~~~ 243 (265)
|+.++|.+++
T Consensus 209 el~~~l~~~~ 218 (220)
T 2zg6_A 209 EALQKIEEMN 218 (220)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999887764
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.1e-25 Score=178.91 Aligned_cols=120 Identities=23% Similarity=0.349 Sum_probs=107.0
Q ss_pred CCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 94 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
....++|++.++++.++ .+++++||++.. ++.+++..+|+.++++++.+..
T Consensus 102 ~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~~~---------------------- 154 (230)
T 3vay_A 102 HQVQIFPEVQPTLEILAKTFTLGVITNGNAD-----VRRLGLADYFAFALCAEDLGIG---------------------- 154 (230)
T ss_dssp TCCCBCTTHHHHHHHHHTTSEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHTCC----------------------
T ss_pred ccCccCcCHHHHHHHHHhCCeEEEEECCchh-----hhhcCcHHHeeeeEEccccCCC----------------------
Confidence 45788999999988873 788999998765 7888999999999999877764
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~~~l~~ 241 (265)
||++.+++.+++++|++|++|++|||+. +|+.+|+.+|+.++++.++.. ...++++++++.||.++|.+
T Consensus 155 -kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l~~ 228 (230)
T 3vay_A 155 -KPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVLAR 228 (230)
T ss_dssp -TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHHHT
T ss_pred -CcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHHHh
Confidence 9999999999999999999999999998 999999999999999987654 45799999999999998865
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=179.87 Aligned_cols=194 Identities=18% Similarity=0.170 Sum_probs=138.8
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCC-CChHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYE-FDNDEFH 84 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~ 84 (265)
++|+|+||+||||+++...+...+.+ +++.+|.+...... +....|.... .....+.. .....+.
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~-----~~~~~g~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNE----LPDTLGLRIDMVVDLWYARQPWNGPSRQEVV 78 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGG----SCCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHH-----HHHHcCCCCChHHH----HHHHhCCCHHHHHHHHHHHcCCCccCHHHHH
Confidence 58999999999999987777666655 44455554331000 0000111111 01111111 1122222
Q ss_pred HH----HhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 85 AF----VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 85 ~~----~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
.. +.+.+ .....++|++.++++.+ +.+++++|+.....++..++.+++..+|+.++++++.+..
T Consensus 79 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------- 149 (226)
T 1te2_A 79 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS-------- 149 (226)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCC--------
T ss_pred HHHHHHHHHHH-hccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccCCC--------
Confidence 11 11111 13457789998888766 5889999999999999999999999999999998877654
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCH
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSI 232 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~ 232 (265)
||++.+++.+++++|++++++++|||+.||+.|++.+|+.++++.++.+ +..|++++.++
T Consensus 150 ---------------kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~ 214 (226)
T 1te2_A 150 ---------------KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSL 214 (226)
T ss_dssp ---------------TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred ---------------CCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCH
Confidence 9999999999999999999999999999999999999999999987653 45699999999
Q ss_pred hHHHH
Q 024578 233 HNIKE 237 (265)
Q Consensus 233 ~el~~ 237 (265)
.||.+
T Consensus 215 ~el~~ 219 (226)
T 1te2_A 215 TELTA 219 (226)
T ss_dssp GGCCH
T ss_pred HHHhH
Confidence 99866
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=179.84 Aligned_cols=122 Identities=21% Similarity=0.279 Sum_probs=107.9
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
...++||+.+ ++.++ .+++|+||.+...++..++.+|+..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~~-l~~l~~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~----------------------- 127 (201)
T 2w43_A 72 NLKAYEDTKY-LKEISEIAEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKEY----------------------- 127 (201)
T ss_dssp TCEECGGGGG-HHHHHHHSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------
T ss_pred ccccCCChHH-HHHHHhCCeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCCC-----------------------
Confidence 3677888888 77664 789999999999999999999999999999999877664
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCHhHHHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~~el~~~l~~~ 242 (265)
||++++++.+++++| |++|++|||+.+|+.+|+++|+.++++.++.. ...++++++++.|+.++|.++
T Consensus 128 Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~ 200 (201)
T 2w43_A 128 KPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEWILRY 200 (201)
T ss_dssp TTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHHHHhc
Confidence 999999999999999 99999999999999999999999999987543 346899999999999888654
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=178.15 Aligned_cols=117 Identities=13% Similarity=0.146 Sum_probs=101.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
....++||+.++|+.+ +.+++|+||++....+..++.+ ++..+|+.++++ +++ .
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~~~-~------------------ 186 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-KIG-H------------------ 186 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-GGC-C------------------
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-CCC-C------------------
Confidence 4568899999999887 5899999999999888888854 588999999988 666 5
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCC------CCCCceecCHhHH
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPV------PPADHALNSIHNI 235 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~------~~a~~~v~~~~el 235 (265)
||+|++|+.+++++|++|++|++|||+.+|+.+|+++|+.++++.++... ..++++++++.+|
T Consensus 187 -----KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el 255 (261)
T 1yns_A 187 -----KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 255 (261)
T ss_dssp -----TTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred -----CCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHh
Confidence 99999999999999999999999999999999999999999999764332 2467888888876
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=171.61 Aligned_cols=176 Identities=20% Similarity=0.314 Sum_probs=127.4
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHh--c-ccHHH-HHHc----CCCCChH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH--G-TTMAG-LKAV----GYEFDND 81 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~~~~----~~~~~~~ 81 (265)
|++|+|+||+||||+++.. ....+.+ .++.+|++..............+ + ..... +... +......
T Consensus 2 M~~k~viFDlDGTL~d~~~-~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (200)
T 3cnh_A 2 MTIKALFWDIGGVLLTNGW-DREQRAD-----VAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPE 75 (200)
T ss_dssp CCCCEEEECCBTTTBCCSS-CHHHHHH-----HHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHH
T ss_pred CCceEEEEeCCCeeECCCc-chHHHHH-----HHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHH
Confidence 3589999999999999764 3344433 45566776543332222222211 1 11111 1111 1122333
Q ss_pred HHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCc
Q 024578 82 EFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGI 159 (265)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~ 159 (265)
.+.+.+. ....++|++.++++.++ .+++|+||.+...+...++.+++..+|+.++++++.+.
T Consensus 76 ~~~~~~~-----~~~~~~~~~~~~l~~l~~~g~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~~----------- 139 (200)
T 3cnh_A 76 DFRAVME-----EQSQPRPEVLALARDLGQRYRMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALGV----------- 139 (200)
T ss_dssp HHHHHHH-----HTCCBCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHSC-----------
T ss_pred HHHHHHH-----hcCccCccHHHHHHHHHHcCCEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccCC-----------
Confidence 3443332 33458999999988772 28999999999999999999999999999999887665
Q ss_pred ccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 160 ENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 160 ~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
+||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.++++.++
T Consensus 140 ------------~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 140 ------------MKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp ------------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred ------------CCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 399999999999999999999999999999999999999999999875
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.92 E-value=3.6e-25 Score=178.47 Aligned_cols=189 Identities=17% Similarity=0.214 Sum_probs=133.5
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCC-hhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHH
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHID-ESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA 85 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 85 (265)
+|+|+||+||||+++...+..++.+ .++.+|.. ..... .....|.... .....+...+......
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQF-----NEQLKGVSREDSLQKILDLADKKVSAEEFKE 71 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCSHHH-----HTTTTTCCHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHH-----HHHHcCCCCCCHHH-----HHHhCCCCHHHHHHHHHHHhCCCCChHHHHH
Confidence 7899999999999977777666655 34445554 21110 0111122111 1122232233222211
Q ss_pred -------HHhcccc-CCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 86 -------FVHGKLP-YEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 86 -------~~~~~~~-~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
.+.+... .....++|++.++++.+ +.+++++|+. ......++.+++..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~~----- 144 (221)
T 2wf7_A 72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAAS----- 144 (221)
T ss_dssp HHHHHHHHHHHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSSC-----
T ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCCC-----
Confidence 1111111 12456789999988776 5889999998 5567788899999999999998877664
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhH
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHN 234 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~e 234 (265)
||++++++.+++++|++|++|++|||+.||+.||+.+|+.+++++.......+++++.++.+
T Consensus 145 ------------------Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~a~~v~~~~~e 206 (221)
T 2wf7_A 145 ------------------KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSH 206 (221)
T ss_dssp ------------------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGG
T ss_pred ------------------CCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEECCHHHhccccchhcCHHh
Confidence 99999999999999999999999999999999999999999999764432389999999999
Q ss_pred H
Q 024578 235 I 235 (265)
Q Consensus 235 l 235 (265)
+
T Consensus 207 l 207 (221)
T 2wf7_A 207 Y 207 (221)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-24 Score=182.68 Aligned_cols=190 Identities=18% Similarity=0.166 Sum_probs=136.0
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCC-CChhhHHHHHHHHHHHhcccHHHH-HHcCC-CCChHH---HH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLH-IDESEVPRMCLELYREHGTTMAGL-KAVGY-EFDNDE---FH 84 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~---~~ 84 (265)
++|+|+||+||||+++...+..++.+ +.+.+| ..... ......|...... ..... ...... +.
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~-----~~~~~g~~~~~~------~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 102 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRD-----FGKDKPYFDAEH------VIHISHGWRTYDAIAKFAPDFADEEYVNKLE 102 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHH-----HHTTCTTCCHHH------HHHHCTTCCHHHHHHHHCGGGCCHHHHHHHH
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHH-----HHHHcCCCCHHH------HHHHhcCCCHHHHHHHHhccCCcHHHHHHHH
Confidence 47999999999999988776666654 455566 22111 1111123322211 11110 011111 11
Q ss_pred HHHhccccCCCCCCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 85 AFVHGKLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 85 ~~~~~~~~~~~~~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
..+.+. ......++||+.++++.+ +.+++|+|+.....+...++.+++. .|+.++++++...
T Consensus 103 ~~~~~~-~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~~~~~------------ 168 (275)
T 2qlt_A 103 GEIPEK-YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITANDVKQ------------ 168 (275)
T ss_dssp HTHHHH-HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGGGCSS------------
T ss_pred HHHHHH-HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcccCCC------------
Confidence 111111 124567889999988766 4679999999999999999999886 4888888887665
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCC-------CCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCce
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANV-------DPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHA 228 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~-------~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~ 228 (265)
+||++++++.+++++|+ +|++|++|||+.||+.||+.+|+.++++.++.. +..|+++
T Consensus 169 -----------~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v 237 (275)
T 2qlt_A 169 -----------GKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDII 237 (275)
T ss_dssp -----------CTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEE
T ss_pred -----------CCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEE
Confidence 49999999999999999 999999999999999999999999999988754 3469999
Q ss_pred ecCHhHHH
Q 024578 229 LNSIHNIK 236 (265)
Q Consensus 229 v~~~~el~ 236 (265)
+.++.+|.
T Consensus 238 ~~~~~el~ 245 (275)
T 2qlt_A 238 VKNHESIR 245 (275)
T ss_dssp ESSGGGEE
T ss_pred ECChHHcC
Confidence 99998864
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=166.87 Aligned_cols=125 Identities=15% Similarity=0.259 Sum_probs=110.5
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCCh---hHHHHHHhHhCCccccceeeecCCC----CCCCCCCCCCCCcccCc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLEDCFEGIICFETI----NPRLQPADNTDGIENNS 163 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~---~~~~~~l~~~~~~~~fd~i~~~~~~----~~~~~~~~~~~~~~~~~ 163 (265)
....++||+.++|+.| +++++|+||++. ..+...++.+|+..+|+.++++++. +.
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~--------------- 95 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKM--------------- 95 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCC---------------
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCC---------------
Confidence 4468999999998887 589999999987 8899999999999999999999875 33
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCC--------CCCCCceec--CH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALN--SI 232 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~--~~ 232 (265)
+||++++|+.+++++|++|++|++|||+ .+|+.+|+++|+.++++.++.. ...++++++ ++
T Consensus 96 --------~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l 167 (189)
T 3ib6_A 96 --------EKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDL 167 (189)
T ss_dssp --------CTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSG
T ss_pred --------CCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccH
Confidence 4999999999999999999999999999 6999999999999999987653 127899999 99
Q ss_pred hHHHHHHHH
Q 024578 233 HNIKEAIPE 241 (265)
Q Consensus 233 ~el~~~l~~ 241 (265)
.+|.++|.-
T Consensus 168 ~~l~~~l~l 176 (189)
T 3ib6_A 168 ADVPEALLL 176 (189)
T ss_dssp GGHHHHHHH
T ss_pred HhHHHHHHH
Confidence 999987643
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-23 Score=171.49 Aligned_cols=177 Identities=23% Similarity=0.246 Sum_probs=127.3
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHH---HHHHHHh--cc-cHH-----HHHHcCCCC
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMC---LELYREH--GT-TMA-----GLKAVGYEF 78 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~-~~~-----~~~~~~~~~ 78 (265)
+++|+|+||+||||+++.. ..+.+ .++..|++........ ...+..+ |. ... .....+...
T Consensus 26 ~~ik~viFD~DGTL~d~~~---~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 97 (229)
T 4dcc_A 26 KGIKNLLIDLGGVLINLDR---ERCIE-----NFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMV 97 (229)
T ss_dssp CCCCEEEECSBTTTBCBCH---HHHHH-----HHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCC
T ss_pred CCCCEEEEeCCCeEEeCCh---HHHHH-----HHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCC
Confidence 4589999999999999663 22222 3344555422211000 0111111 11 111 122345566
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHH------hHhCCccccceeeecCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVL------GRLGLEDCFEGIICFETINPRL 150 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l------~~~~~~~~fd~i~~~~~~~~~~ 150 (265)
..+.+.+.+.+.. ..++||+.++++.++ .+++|+||++.......+ +.+++..+|+.++++++.+..
T Consensus 98 ~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~- 172 (229)
T 4dcc_A 98 SDKQIDAAWNSFL----VDIPTYKLDLLLKLREKYVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMA- 172 (229)
T ss_dssp CHHHHHHHHHTTB----CCCCHHHHHHHHHHTTTSEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCC-
T ss_pred CHHHHHHHHHHHH----HhccHHHHHHHHHHHhcCcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCC-
Confidence 6666666665422 246799999998875 788999999999888555 778888999999999887764
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
||++++|+.+++++|++|++|++|||+.+|+.+|+++|+.+++++++..
T Consensus 173 ----------------------KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~~ 221 (229)
T 4dcc_A 173 ----------------------KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGED 221 (229)
T ss_dssp ----------------------TTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTCC
T ss_pred ----------------------CCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHHH
Confidence 9999999999999999999999999999999999999999999988753
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=167.57 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=103.9
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++||+.++|+.| +++++|+||.........+. .+|+.++++++....
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-----~~~d~v~~~~~~~~~--------------------- 86 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-----PVNDWMIAAPRPTAG--------------------- 86 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-----TTTTTCEECCCCSSC---------------------
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-----ccCCEEEECCcCCCC---------------------
Confidence 4467899999999888 58999999998877644333 468999998887664
Q ss_pred CCCCCHHHHHHHHHHcCCCC-CcEEEEcCChhcHHHHHHcCceEEEECCCCC----------------------------
Q 024578 171 LCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------------------------- 221 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~-~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---------------------------- 221 (265)
||+|+++..+++++|+.+ ++|++|||+.+|+.+|+++|+.++++.++..
T Consensus 87 --KP~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l 164 (196)
T 2oda_A 87 --WPQPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKL 164 (196)
T ss_dssp --TTSTHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred --CCChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHH
Confidence 999999999999999975 8999999999999999999999999988753
Q ss_pred -CCCCCceecCHhHHHHHHHHHh
Q 024578 222 -VPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 222 -~~~a~~~v~~~~el~~~l~~~~ 243 (265)
...++++++++.||.++|..+.
T Consensus 165 ~~~~~d~vi~~~~eL~~~l~~~~ 187 (196)
T 2oda_A 165 YSLGVHSVIDHLGELESCLADIA 187 (196)
T ss_dssp HHTTCSEEESSGGGHHHHHHHHH
T ss_pred HHcCCCEEeCCHHHHHHHHHHHH
Confidence 2468999999999999887654
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.90 E-value=9.5e-23 Score=160.75 Aligned_cols=173 Identities=16% Similarity=0.163 Sum_probs=121.3
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH-HHcCCCCC-hHHHHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL-KAVGYEFD-NDEFHAFV 87 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~ 87 (265)
|++|+|+||+||||+|+...+..++.+ .++.+|+...... ....+. +.....+ ...+.... ...+...+
T Consensus 4 M~~k~i~fDlDGTL~d~~~~~~~~~~~-----~~~~~g~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (190)
T 2fi1_A 4 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDS-VYQALK---VSTPFAIETFAPNLENFLEKYKENE 74 (190)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHH-HHHHHH---HCHHHHHHHHCTTCTTHHHHHHHHH
T ss_pred CcccEEEEeCCCCcCCCHHHHHHHHHH-----HHHHhCCCCCHHH-HHHHHc---cccHHHHHHHhhhHHHHHHHHHHHH
Confidence 458999999999999977766666655 4455566533211 111111 1111111 11111100 11222222
Q ss_pred hccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 88 HGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 88 ~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
.+.. ....++|++.++++.+ +.+++++||... .+...++.+++..+|+.++++++...
T Consensus 75 ~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~~---------------- 135 (190)
T 2fi1_A 75 AREL--EHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGFK---------------- 135 (190)
T ss_dssp HHHT--TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCCC----------------
T ss_pred HHhc--CcCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccCC----------------
Confidence 2221 2233889999998877 588999999864 67888999999999999999887766
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
+||+++.++.+++++|++ +|++|||+.||+.+++.+|+.+++++++
T Consensus 136 -------~kp~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 136 -------RKPNPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp -------CTTSCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred -------CCCCHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 499999999999999998 9999999999999999999999999875
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-22 Score=165.82 Aligned_cols=115 Identities=12% Similarity=0.210 Sum_probs=96.1
Q ss_pred CCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHh--C---------CccccceeeecCCC-CCCCCCCCCCCCcccC
Q 024578 95 KLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL--G---------LEDCFEGIICFETI-NPRLQPADNTDGIENN 162 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~--~---------~~~~fd~i~~~~~~-~~~~~~~~~~~~~~~~ 162 (265)
...++||+.++|+. +.+++|+||++...++..++.. | +..+|+.++.+ .+ +
T Consensus 123 ~~~~~pgv~e~L~~-g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~-~~~g--------------- 185 (253)
T 2g80_A 123 KAPVYADAIDFIKR-KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI-NTSG--------------- 185 (253)
T ss_dssp CBCCCHHHHHHHHH-CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH-HHHC---------------
T ss_pred cCCCCCCHHHHHHc-CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee-eccC---------------
Confidence 46789999999999 9999999999999999998876 3 55667666544 22 2
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-CCC---CCCCceecCHhHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-VPV---PPADHALNSIHNI 235 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~~~---~~a~~~v~~~~el 235 (265)
+||+|++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.+. ... ..++.+++++.||
T Consensus 186 ---------~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 186 ---------KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp ---------CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred ---------CCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 299999999999999999999999999999999999999999999763 321 2277888888764
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=167.49 Aligned_cols=173 Identities=19% Similarity=0.243 Sum_probs=123.0
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHH-----HH--Hhcc-cHH-----HHHHcCC
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLEL-----YR--EHGT-TMA-----GLKAVGY 76 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~-~~~-----~~~~~~~ 76 (265)
+|+|+|+||+||||+|+...+. .. ....+|.+... .....+ .. ..+. ... .....+.
T Consensus 3 ~m~k~iiFDlDGTL~d~~~~~~---~~-----~~~~~g~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 72 (211)
T 2i6x_A 3 AMIRNIVFDLGGVLIHLNREES---IR-----RFKAIGVADIE--EMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGK 72 (211)
T ss_dssp CCCSEEEECSBTTTEEECHHHH---HH-----HHHHTTCTTHH--HHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTS
T ss_pred ccceEEEEeCCCeeEecchHHH---HH-----HHHHhCCchHH--HHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCC
Confidence 4589999999999999776543 11 23444544221 000000 00 0010 000 1122233
Q ss_pred CCChHHHHHHHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhH------hCCccccceeeecCCCCC
Q 024578 77 EFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGR------LGLEDCFEGIICFETINP 148 (265)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~------~~~~~~fd~i~~~~~~~~ 148 (265)
......+...+.. ....++|++.++++.+ +.+++|+||.....+...++. +++..+|+.++++++.+.
T Consensus 73 ~~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~~ 148 (211)
T 2i6x_A 73 ELTYQQVYDALLG----FLEEISAEKFDYIDSLRPDYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMGK 148 (211)
T ss_dssp CCCHHHHHHHHGG----GEEEECHHHHHHHHHHTTTSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHTC
T ss_pred CCCHHHHHHHHHH----hhcccChHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccCC
Confidence 3333344333322 2246789999998877 588999999999999999998 799999999999887766
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
. ||++++++.+++++|++|++|++|||+.+|+.+|+.+|+.+++++++
T Consensus 149 ~-----------------------Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 149 Y-----------------------KPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp C-----------------------TTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred C-----------------------CCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 4 99999999999999999999999999999999999999999999876
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=162.78 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=102.4
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeee-----cCCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIIC-----FETINPRLQ 151 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~-----~~~~~~~~~ 151 (265)
.++++||+.++|+.| +++++|+||++. ..+...++.+| .+|+.++. +++...
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~~~~~~~--- 99 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGPDDGCAC--- 99 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCTTSCCSS---
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCCCCCCCC---
Confidence 457889999998887 589999999986 56677888887 44666553 344443
Q ss_pred CCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--------CC
Q 024578 152 PADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--------VP 223 (265)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--------~~ 223 (265)
+||++.+++.+++++|++|++|++|||+.+|+.+|+++|+.++++.++.. ..
T Consensus 100 --------------------~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~ 159 (179)
T 3l8h_A 100 --------------------RKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLP 159 (179)
T ss_dssp --------------------STTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCC
T ss_pred --------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccC
Confidence 49999999999999999999999999999999999999999999998863 26
Q ss_pred CCCceecCHhHHHHHHHH
Q 024578 224 PADHALNSIHNIKEAIPE 241 (265)
Q Consensus 224 ~a~~~v~~~~el~~~l~~ 241 (265)
.++++++++.||.++|.+
T Consensus 160 ~~d~v~~~l~el~~~l~~ 177 (179)
T 3l8h_A 160 EGTRVCEDLAAVAEQLLQ 177 (179)
T ss_dssp TTEEEESSHHHHHHHHHH
T ss_pred CCcEEecCHHHHHHHHHh
Confidence 789999999999988753
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=168.73 Aligned_cols=128 Identities=15% Similarity=0.171 Sum_probs=99.9
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
...++||+.++++.+ +.+++|+||+....++..++.+|+..+|+.++..++... .+..+.....
T Consensus 73 ~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------~~~~~~~~~~ 139 (217)
T 3m1y_A 73 SLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVENDAL-------------NGLVTGHMMF 139 (217)
T ss_dssp TCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE-------------EEEEEESCCS
T ss_pred cCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeCCEE-------------EeeeccCCCC
Confidence 367899999998877 478999999999999999999999999999875543110 0001111223
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCceecCHhHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNSIHNIKE 237 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v~~~~el~~ 237 (265)
+|||+++++.+++++|++|++|++|||+.+|+.+|+.+|+.+++ +... -+..|++++++. +|.+
T Consensus 140 ~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~~~~l~~~ad~v~~~~-dl~~ 204 (217)
T 3m1y_A 140 SHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHCINEP-DLAL 204 (217)
T ss_dssp TTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SCCHHHHTTCSEEECSS-BGGG
T ss_pred CCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-CccHHHHHhcceeeccc-CHHH
Confidence 69999999999999999999999999999999999999998877 3222 266789988753 4444
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-23 Score=168.07 Aligned_cols=197 Identities=19% Similarity=0.160 Sum_probs=133.6
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHH-HHHHHHHHHhccc--HHHHHHc----CCCCChHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVP-RMCLELYREHGTT--MAGLKAV----GYEFDNDE 82 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~ 82 (265)
.++|+|+||+||||+|+...+..++.+ .++.+|++..... .....+....|.. ...+... ........
T Consensus 9 ~~~k~viFDlDGTL~ds~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (231)
T 2p11_A 9 PHDIVFLFDCDNTLLDNDHVLADLRAH-----MMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLL 83 (231)
T ss_dssp CCSEEEEECCBTTTBCHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGG
T ss_pred CCCeEEEEcCCCCCEecHHHHHHHHHH-----HHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHH
Confidence 468899999999999987777766665 3444454322110 0011222222222 1111111 11111222
Q ss_pred HHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcc
Q 024578 83 FHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIE 160 (265)
Q Consensus 83 ~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~ 160 (265)
+...+... .....++||+.++|+.++ .+++|+||++...++..++.+|+..+|+.++...
T Consensus 84 ~~~~~~~~--~~~~~~~~g~~~~l~~l~~~g~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~~---------------- 145 (231)
T 2p11_A 84 MSSFLIDY--PFASRVYPGALNALRHLGARGPTVILSDGDVVFQPRKIARSGLWDEVEGRVLIY---------------- 145 (231)
T ss_dssp GHHHHHHC--CGGGGBCTTHHHHHHHHHTTSCEEEEEECCSSHHHHHHHHTTHHHHTTTCEEEE----------------
T ss_pred HHHHHHHH--HHhCCcCccHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEec----------------
Confidence 33333221 245678999999998772 2899999999999999999999998888765422
Q ss_pred cCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh---cHHHHHHcCceEEEECCCCC--------CC-CCCce
Q 024578 161 NNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSAR---NIASAKAAGLHTVIVGSSVP--------VP-PADHA 228 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~---Di~~a~~aG~~~i~~~~~~~--------~~-~a~~~ 228 (265)
++|+..++.+++ +++|++|++|||+.+ |+.+|+++|+.++++.++.. .. .++++
T Consensus 146 ------------~~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~ 211 (231)
T 2p11_A 146 ------------IHKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVT 211 (231)
T ss_dssp ------------SSGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEE
T ss_pred ------------CChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCcee
Confidence 444667777776 789999999999999 99999999999999988732 12 48999
Q ss_pred ecCHhHHHHHHHHHh
Q 024578 229 LNSIHNIKEAIPEIW 243 (265)
Q Consensus 229 v~~~~el~~~l~~~~ 243 (265)
++++.||.++|.+++
T Consensus 212 i~~~~el~~~l~~~~ 226 (231)
T 2p11_A 212 VERIGDLVEMDAEWL 226 (231)
T ss_dssp ESSGGGGGGCGGGGC
T ss_pred ecCHHHHHHHHHHHH
Confidence 999999988877654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.6e-23 Score=167.39 Aligned_cols=102 Identities=21% Similarity=0.394 Sum_probs=90.8
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..++|++.++++.+ +.+++|+||++.......++. +|+..+|+.++++++.+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~---------------------- 147 (206)
T 2b0c_A 90 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR---------------------- 147 (206)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccCCC----------------------
Confidence 56889999998876 589999999988877776766 7888889999998877664
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
||+++++..+++++|++|+++++|||+.+|+.+|+.+|+.+++++++.
T Consensus 148 -Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 148 -KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred -CCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 999999999999999999999999999999999999999999998763
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.8e-22 Score=163.84 Aligned_cols=195 Identities=11% Similarity=0.111 Sum_probs=124.1
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHH-Hc-CCCCChHHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLK-AV-GYEFDNDEFHAF 86 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~ 86 (265)
++++|+|+||+||||+|+.. +.+ +++.+|.+................ ....+. .. ......+.+.+.
T Consensus 11 ~~~~k~viFD~DGTLvd~~~-----~~~-----~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (225)
T 1nnl_A 11 FYSADAVCFDVDSTVIREEG-----IDE-----LAKICGVEDAVSEMTRRAMGGAVP-FKAALTERLALIQPSREQVQRL 79 (225)
T ss_dssp HHHCSEEEEETBTTTBSSCH-----HHH-----HHHHTTCTTTC------------C-HHHHHHHHHHHHCCCHHHHHHH
T ss_pred HhhCCEEEEeCccccccccc-----HHH-----HHHHhCCcHHHHHHHHHHHcCCcc-HHHHHHHHHHHhcCCHHHHHHH
Confidence 34689999999999999753 121 455566543211111111100000 000000 00 011223334443
Q ss_pred HhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc--cccceee--------ecCCCCCCCCCC
Q 024578 87 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGII--------CFETINPRLQPA 153 (265)
Q Consensus 87 ~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~--~~fd~i~--------~~~~~~~~~~~~ 153 (265)
+.. ...+++||+.++|+.+ +.+++|+||+....++..++.+|+. .+|+.++ ++.+...
T Consensus 80 ~~~----~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~----- 150 (225)
T 1nnl_A 80 IAE----QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQ----- 150 (225)
T ss_dssp HHH----SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTS-----
T ss_pred HHh----ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcCCCcEecCCCCC-----
Confidence 322 2467899999998877 5899999999999999999999987 3777664 2222211
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCcee
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHAL 229 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v 229 (265)
..+.++|||+.++.+++++|+ ++|++|||+.+|+.+|+++|+ +++++.... ...+++++
T Consensus 151 --------------~~~~~~~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~ 213 (225)
T 1nnl_A 151 --------------PTAESGGKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYI 213 (225)
T ss_dssp --------------GGGSTTHHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEE
T ss_pred --------------cccCCCchHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeee
Confidence 011136888999999999998 789999999999999999999 777765432 23589999
Q ss_pred cCHhHHHHHHH
Q 024578 230 NSIHNIKEAIP 240 (265)
Q Consensus 230 ~~~~el~~~l~ 240 (265)
.++.|+.++|.
T Consensus 214 ~~~~el~~~l~ 224 (225)
T 1nnl_A 214 TDFVELLGELE 224 (225)
T ss_dssp SCGGGGCC---
T ss_pred cCHHHHHHHHh
Confidence 99999877653
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-22 Score=161.05 Aligned_cols=131 Identities=8% Similarity=0.011 Sum_probs=103.8
Q ss_pred CCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCcccc-ceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++||+.++++.++ .+++|+||+....++..++.+|+..+| +.++++++.... .
T Consensus 66 ~~~~~~~g~~~~l~~l~~~~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~~--------------------~ 125 (206)
T 1rku_A 66 ATLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV--------------------G 125 (206)
T ss_dssp TTCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEE--------------------E
T ss_pred HhcCCCccHHHHHHHHHhcCcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCceEE--------------------e
Confidence 45678999999998874 789999999999999999999999999 566665543210 0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCce-ecCHhHHHHHHHHHhcC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA-LNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~-v~~~~el~~~l~~~~~~ 245 (265)
..+|+|..+..++++++.+|++|++|||+.+|+.+|+.+|+.+++ ..... ...++++ ++++.++.++|.+++..
T Consensus 126 ~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 202 (206)
T 1rku_A 126 YQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKASSR 202 (206)
T ss_dssp EECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCSS
T ss_pred eecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CCcHHHHHHHhhhccccchHHHHHHHHHHhcc
Confidence 014888999999999999999999999999999999999998664 32211 2345665 89999999999877643
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=157.91 Aligned_cols=134 Identities=18% Similarity=0.185 Sum_probs=105.6
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
...++||+.++|+.| +++++|+||+. ...+...++.+|+. |+.++.+......
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~~------- 118 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG------- 118 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC-------
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCCC-------
Confidence 357889999998877 58999999999 47788899999987 8877654321100
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCCC-----CCCCceec
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVPV-----PPADHALN 230 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~~-----~~a~~~v~ 230 (265)
..+.+......+||++.+++.+++++|++|++|++|||+.+|+.+|+++|+.+ +++.++... ..++++++
T Consensus 119 ----~~~~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~ 194 (211)
T 2gmw_A 119 ----SVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLN 194 (211)
T ss_dssp ----SSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEES
T ss_pred ----cccccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeC
Confidence 00001112234699999999999999999999999999999999999999999 999887542 35899999
Q ss_pred CHhHHHHHHHH
Q 024578 231 SIHNIKEAIPE 241 (265)
Q Consensus 231 ~~~el~~~l~~ 241 (265)
++.||.++|..
T Consensus 195 ~l~el~~~l~~ 205 (211)
T 2gmw_A 195 SLADLPQAIKK 205 (211)
T ss_dssp CGGGHHHHHHC
T ss_pred CHHHHHHHHHh
Confidence 99999987754
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.86 E-value=9.3e-24 Score=172.99 Aligned_cols=65 Identities=26% Similarity=0.298 Sum_probs=59.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCC-----C---CCCCceecCHhHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP-----V---PPADHALNSIHNIK 236 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~-----~---~~a~~~v~~~~el~ 236 (265)
+|||+.+++.+++++|++|++|++|||+ .||+.|++.+|+.++++.++.. + ..++++++++.||.
T Consensus 175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el~ 248 (250)
T 2c4n_A 175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEID 248 (250)
T ss_dssp STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGCC
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHhh
Confidence 6999999999999999999999999999 6999999999999999987653 1 47999999998864
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.9e-22 Score=168.21 Aligned_cols=201 Identities=10% Similarity=0.087 Sum_probs=128.4
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHh-c--ccHHHHHHcCCCCChHHHH
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH-G--TTMAGLKAVGYEFDNDEFH 84 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~ 84 (265)
.++.+|+|+||+||||+++... . .+.+.+|....... ......... . ...............+.+.
T Consensus 104 ~~~~~kaviFDlDGTLid~~~~-----~-----~la~~~g~~~~~~~-~~~~~~~g~~~~~~~l~~~~~~l~~~~~~~i~ 172 (317)
T 4eze_A 104 PLPANGIIAFDMDSTFIAEEGV-----D-----EIARELGMSTQITA-ITQQAMEGKLDFNASFTRRIGMLKGTPKAVLN 172 (317)
T ss_dssp SCCCSCEEEECTBTTTBSSCHH-----H-----HHHHHTTCHHHHHH-HHHHHHTTSSCHHHHHHHHHHTTTTCBHHHHH
T ss_pred cCCCCCEEEEcCCCCccCCccH-----H-----HHHHHhCCcHHHHH-HHHHHhcCCCCHHHHHHHHHHHhcCCCHHHHH
Confidence 3567899999999999996532 1 13445555322211 111111000 0 0000011111122333343
Q ss_pred HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCccc
Q 024578 85 AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 85 ~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
... ..+.++||+.++++.+ +.+++|+||+....++..++.+|+..+|+.++..++...
T Consensus 173 ~~~------~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~dg~~------------- 233 (317)
T 4eze_A 173 AVC------DRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRDNVL------------- 233 (317)
T ss_dssp HHH------HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEETTEE-------------
T ss_pred HHH------hCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeCCee-------------
Confidence 333 3467899999998877 599999999999999999999999999988776443110
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCce--ecCHhHHHHH
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHA--LNSIHNIKEA 238 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~--v~~~~el~~~ 238 (265)
.+........+|||++.++.+++++|++|+++++|||+.+|+.+++.+|+.+++ +... ....++.+ ..++.++.++
T Consensus 234 tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~~~~~~~~a~~~i~~~~L~~ll~~ 312 (317)
T 4eze_A 234 TDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KAKPVVREKIHHQINYHGFELLLFL 312 (317)
T ss_dssp EEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SCCHHHHHHCCEEESSSCGGGGGGG
T ss_pred eeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CCCHHHHHhcCeeeCCCCHHHHHHH
Confidence 000111122359999999999999999999999999999999999999998777 3221 13334444 3467766655
Q ss_pred H
Q 024578 239 I 239 (265)
Q Consensus 239 l 239 (265)
|
T Consensus 313 L 313 (317)
T 4eze_A 313 I 313 (317)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-23 Score=172.77 Aligned_cols=121 Identities=15% Similarity=0.124 Sum_probs=98.2
Q ss_pred CCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccc---eeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFE---GIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
.++|++.++++.+ +.++ ++||.+.......+...++..+|+ .++++++...
T Consensus 122 ~~~~~~~~~l~~l~~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------- 177 (259)
T 2ho4_A 122 FHYQLLNQAFRLLLDGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVV----------------------- 177 (259)
T ss_dssp CBHHHHHHHHHHHHTTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTCCCEEC-----------------------
T ss_pred CCHHHHHHHHHHHHCCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCCCceEe-----------------------
Confidence 3678888887765 5777 889887766555566677777776 4455555544
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l~~ 241 (265)
+||++.+++.+++++|++|++|++|||+. +|+.+|+++|+.++++.++.. ...++++++++.++.+++.+
T Consensus 178 ~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~ 256 (259)
T 2ho4_A 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQ 256 (259)
T ss_dssp STTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHHHHH
Confidence 49999999999999999999999999999 999999999999999988732 35689999999999887764
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5.6e-21 Score=152.67 Aligned_cols=129 Identities=15% Similarity=0.175 Sum_probs=93.7
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
..+.|++.++++.+ +.+++++|+.....++..++.+++..+|+.++...+... . +........+
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~ 141 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKL------------T-GDVEGEVLKE 141 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE------------E-EEEECSSCST
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEECCEE------------c-CCcccCccCC
Confidence 45678988888776 588999999988888888899888766665443221000 0 0000001124
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCceecC--HhHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNS--IHNIKEA 238 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v~~--~~el~~~ 238 (265)
++|+..+..+++++|++|++|++|||+.||+.|++.+|+.++ +.... .+..|++++.+ +.+|.++
T Consensus 142 ~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~-~~~~~~~~~~a~~v~~~~~~~~l~~~ 209 (211)
T 1l7m_A 142 NAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA-FCAKPILKEKADICIEKRDLREILKY 209 (211)
T ss_dssp THHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEE-ESCCHHHHTTCSEEECSSCGGGGGGG
T ss_pred ccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEE-ECCCHHHHhhcceeecchhHHHHHHh
Confidence 678999999999999999999999999999999999999754 44221 25578999988 8887654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-21 Score=151.70 Aligned_cols=121 Identities=14% Similarity=0.164 Sum_probs=92.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....+.|++.++++.+ +.+++|+|++....+... +.+++..+++.+.+.+.....
T Consensus 76 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------------- 133 (201)
T 4ap9_A 76 EKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDGKFQG--------------------- 133 (201)
T ss_dssp GGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETTEEEE---------------------
T ss_pred HhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCCceEC---------------------
Confidence 4468899999998877 589999999988888888 889988776666554432110
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~ 242 (265)
.+|.+.....+++++ +|++|++|||+.||+.+++.+|+. +++.++.. .+++++.++.|+.++|+++
T Consensus 134 -~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~-v~~~~~~~--~ad~v~~~~~el~~~l~~l 199 (201)
T 4ap9_A 134 -IRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMG-IAVGREIP--GADLLVKDLKELVDFIKNL 199 (201)
T ss_dssp -EECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEE-EEESSCCT--TCSEEESSHHHHHHHHHTC
T ss_pred -CcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCce-EEECCCCc--cccEEEccHHHHHHHHHHh
Confidence 144443344556666 899999999999999999999997 55555444 8999999999999988765
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=167.36 Aligned_cols=201 Identities=14% Similarity=0.064 Sum_probs=125.6
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHH---HHcCCCCChHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL---KAVGYEFDNDEFHA 85 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 85 (265)
..++|+|+||+||||+++.. + . .+.+..|...... ..........-.....+ .........+.+..
T Consensus 182 ~~~~k~viFD~DgTLi~~~~-~----~-----~la~~~g~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~ 250 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEV-I----E-----MLAAKAGAEGQVA-AITDAAMRGELDFAQSLQQRVATLAGLPATVIDE 250 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCH-H----H-----HHHHHTTCHHHHH-HHHHHHHTTCSCHHHHHHHHHHTTTTCBTHHHHH
T ss_pred ccCCcEEEEcCcccCcCCch-H----H-----HHHHHcCCcHHHH-HHHHHHhcCCcCHHHHHHHHHHHhcCCCHHHHHH
Confidence 56789999999999999652 1 1 2344455532211 11111111000001111 11111233333333
Q ss_pred HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 86 FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 86 ~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
.. ..+.++||+.++++.+ |.+++|+||+....++..++.+|+..+|+..+...+... .
T Consensus 251 ~~------~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg~~-------------t 311 (415)
T 3p96_A 251 VA------GQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDGTL-------------T 311 (415)
T ss_dssp HH------HHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETTEE-------------E
T ss_pred HH------HhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCCEE-------------E
Confidence 33 3357899999998877 589999999999999999999999877765442211000 0
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceec--CHhHHHHHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~--~~~el~~~l 239 (265)
+........+|||++.++.+++++|++|+++++|||+.+|+.+++.+|+.+++.........+++++. ++.++..++
T Consensus 312 g~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~~~~~ad~~i~~~~l~~ll~~l 390 (415)
T 3p96_A 312 GRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNAKPALREVADASLSHPYLDTVLFLL 390 (415)
T ss_dssp EEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEESCCHHHHHHCSEEECSSCTTHHHHHT
T ss_pred eeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEECCCHHHHHhCCEEEccCCHHHHHHHh
Confidence 00001112259999999999999999999999999999999999999998877211111445777755 555655544
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.83 E-value=5.1e-21 Score=156.72 Aligned_cols=131 Identities=12% Similarity=0.086 Sum_probs=98.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....++||+.++|+.+ +++++|+||+....++..++ ++..+ +.+++++..... +.. ...
T Consensus 74 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~------------~~~---~~~ 135 (236)
T 2fea_A 74 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN------------DYI---HID 135 (236)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS------------SBC---EEE
T ss_pred cCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC------------Cce---EEe
Confidence 3468899999999888 58999999999999998888 76554 888888754321 000 000
Q ss_pred CCCCCHHH-HH-------HHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CC-CCCceecCHhHHHHHH
Q 024578 171 LCKPSLEA-IE-------TAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VP-PADHALNSIHNIKEAI 239 (265)
Q Consensus 171 ~~kp~~~~-~~-------~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~-~a~~~v~~~~el~~~l 239 (265)
..||++.. ++ .++++++++|+++++|||+.+|+.+|+++|+.++....... .. .+++++.++.+|.++|
T Consensus 136 ~~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 136 WPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp CTTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred cCCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechHHHHHHHHCCCCeeecCCHHHHHHHH
Confidence 13777773 44 78899999999999999999999999999998763211111 23 3889999999999988
Q ss_pred HHH
Q 024578 240 PEI 242 (265)
Q Consensus 240 ~~~ 242 (265)
..+
T Consensus 216 ~~~ 218 (236)
T 2fea_A 216 ENV 218 (236)
T ss_dssp HTS
T ss_pred HHh
Confidence 765
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.9e-20 Score=169.87 Aligned_cols=102 Identities=22% Similarity=0.309 Sum_probs=86.4
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCC--ChhHHHHHHhHh--CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNA--DQKHAMEVLGRL--GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~--~~~~~~~~l~~~--~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...++||+.++|+.| +++++|+||+ ........+... ++..+||.++++++++..
T Consensus 98 ~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~------------------ 159 (555)
T 3i28_A 98 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV------------------ 159 (555)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC------------------
T ss_pred hcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCC------------------
Confidence 367899999998877 5899999998 222223333333 677889999999988874
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||++++|..+++++|++|++|++|||+.+|+.+|+++|+.++++.++
T Consensus 160 -----KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~ 206 (555)
T 3i28_A 160 -----KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 206 (555)
T ss_dssp -----TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSH
T ss_pred -----CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999999999999999999999999999999765
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.6e-20 Score=150.86 Aligned_cols=138 Identities=13% Similarity=0.178 Sum_probs=106.1
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
..+++||+.++|+.+ +++++|+||+.. ..+...++.+|+. |+.++.+.... . +.+
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~----~-g~~ 126 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHE----A-GVG 126 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCT----T-CCS
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCC----C-Cce
Confidence 356889999998887 589999999988 6888899999875 66654332110 0 000
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCC-----CCCCCceec
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHALN 230 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~-----~~~a~~~v~ 230 (265)
- ........+||++.+++.+++++|++|+++++|||+.+|+.+|+++|+.+ +++.++.. ...++++++
T Consensus 127 ~------~~~~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~ 200 (218)
T 2o2x_A 127 P------LAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSS 200 (218)
T ss_dssp T------TCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHH
T ss_pred e------ecccCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecc
Confidence 0 00111234699999999999999999999999999999999999999999 99988754 235888999
Q ss_pred CHhHHHHHHHHHhcC
Q 024578 231 SIHNIKEAIPEIWEG 245 (265)
Q Consensus 231 ~~~el~~~l~~~~~~ 245 (265)
++.+|.+++.++...
T Consensus 201 ~l~el~~~l~~~~~~ 215 (218)
T 2o2x_A 201 ELGDLLAAIETLGRD 215 (218)
T ss_dssp HHHHHHHHHHHTCCC
T ss_pred cHHHHHHHHHHHhcc
Confidence 999999988876543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-21 Score=160.55 Aligned_cols=119 Identities=18% Similarity=0.166 Sum_probs=92.7
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhH--HHH-HHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKH--AME-VLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~--~~~-~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++|++.++++.+ +.++ |+||.+... ... .++..++..+|+.+++++..+.
T Consensus 124 ~~~~~~~~~~~l~~l~~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~--------------------- 181 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQKGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYI--------------------- 181 (264)
T ss_dssp TTCCHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEEC---------------------
T ss_pred CCcCHHHHHHHHHHHhCCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCcccc---------------------
Confidence 456789999888776 4665 889987643 111 2233345567888887776544
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCCC--------CCCCceecCHhHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIKE 237 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~~--------~~a~~~v~~~~el~~ 237 (265)
+||++.+|+.+++++|++|++|++|||+ .+|+.+|+++|+.++++.++... ..|+++++++.|+.+
T Consensus 182 --~KP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 182 --GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp --STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred --CCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 4999999999999999999999999999 59999999999999999876531 168999999988653
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=144.46 Aligned_cols=124 Identities=8% Similarity=0.018 Sum_probs=90.2
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCc--cccceeee--cCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLE--DCFEGIIC--FETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~--~~fd~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
..++|++.++++.+ +.+++|+|++....++..++.+++. .+|...+. .+.... .
T Consensus 81 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~------ 141 (219)
T 3kd3_A 81 NLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSFK-------------E------ 141 (219)
T ss_dssp TTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBEE-------------E------
T ss_pred ccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCcee-------------c------
Confidence 45789999988776 5899999999999999999999984 34543222 221100 0
Q ss_pred ccCCCCCHH-HHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHHHHHH
Q 024578 169 RILCKPSLE-AIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 169 ~~~~kp~~~-~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el~~~l 239 (265)
....+|.+. .++.+.+.+|++|+++++|||+.||+.|+ ++|+.++++..+.. +..++++++++.||.++|
T Consensus 142 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 142 LDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp EECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred cCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 001255543 55555666799999999999999999998 68998777765432 345999999999998865
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=145.73 Aligned_cols=107 Identities=7% Similarity=-0.006 Sum_probs=82.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
.++||+.++|+.+ +.+++|+|++....++..++.+|+...|...+...+... .+......+.++
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-------------~g~~~~~~~~~~ 158 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIATDPEYRDGRY-------------TGRIEGTPSFRE 158 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEECEEEEETTEE-------------EEEEESSCSSTH
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEcceEEECCEE-------------eeeecCCCCcch
Confidence 5699999998877 589999999999999999999998766655433221000 000001122357
Q ss_pred CCHHHHHHHHHHcC---CCCCcEEEEcCChhcHHHHHHcCceEEEE
Q 024578 174 PSLEAIETAIRIAN---VDPKKTIFFDDSARNIASAKAAGLHTVIV 216 (265)
Q Consensus 174 p~~~~~~~~~~~lg---~~~~~~i~vGD~~~Di~~a~~aG~~~i~~ 216 (265)
+|+..++.+++++| ++|++|++||||.+|+.+++.+|+.+++.
T Consensus 159 ~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 159 GKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp HHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred HHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 88999999999999 99999999999999999999999877653
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-21 Score=161.56 Aligned_cols=120 Identities=13% Similarity=0.155 Sum_probs=91.3
Q ss_pred CCCChhHHHHHhcC--CCcEEEEeCCChhHHHH---HHhHhCCccccceeeecCC-CCCCCCCCCCCCCcccCcCCcCcc
Q 024578 96 LKPDPVLRNLLLSM--PQRKIIFTNADQKHAME---VLGRLGLEDCFEGIICFET-INPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 96 ~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~---~l~~~~~~~~fd~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
..++|++.+.++.+ +.++ ++||........ .++..++..+|+.+++.+. ...
T Consensus 136 ~~~~~~~~~~l~~l~~~~~~-i~tn~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------------- 193 (271)
T 1vjr_A 136 TLTYERLKKACILLRKGKFY-IATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIA--------------------- 193 (271)
T ss_dssp TCCHHHHHHHHHHHTTTCEE-EESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEEC---------------------
T ss_pred CcCHHHHHHHHHHHHCCCeE-EEECCCccccCCCCccccccHHHHHHHHHhCCCCcccC---------------------
Confidence 35568887777665 3555 888876443221 2233344556676666555 444
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCCC--------CCCCceecCHhHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------PPADHALNSIHNIKEAI 239 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~~--------~~a~~~v~~~~el~~~l 239 (265)
+||++.+++.+++++|++|++|++|||+. ||+.||+.+|+.++++.++... ..++++++++.|+.++|
T Consensus 194 --~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~~l 270 (271)
T 1vjr_A 194 --GKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAV 270 (271)
T ss_dssp --STTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHh
Confidence 59999999999999999999999999995 9999999999999999887541 37999999999998765
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-20 Score=151.44 Aligned_cols=111 Identities=14% Similarity=0.176 Sum_probs=90.0
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.|+..+++++|+|+.....++..++.+|+..+|+. .|||++.++.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~--------------------------------~k~K~~~l~~ 131 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQG--------------------------------QSDKLVAYHE 131 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECS--------------------------------CSSHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhcc--------------------------------cCChHHHHHH
Confidence 56777788999999999999999999999998766653 2788999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCceecCH------hHHHHHHHHHhc
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNSI------HNIKEAIPEIWE 244 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v~~~------~el~~~l~~~~~ 244 (265)
+++++|++|++|++|||+.||+.+++.+|+.+++.+... .+..+++++.+. .++.+.+.....
T Consensus 132 ~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~~~~~~Ad~v~~~~~~~G~v~e~~~~ll~~~~ 201 (211)
T 3ij5_A 132 LLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAHYVTRIKGGRGAVREVCDLILLAQD 201 (211)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccHHHHhhCCEEEeCCCCCcHHHHHHHHHHHHcC
Confidence 999999999999999999999999999998766544322 256789998875 455555544333
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-20 Score=145.11 Aligned_cols=110 Identities=13% Similarity=0.080 Sum_probs=89.0
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.++..+.+++|+||.+...++..++.+|+..+|+. .||+++.++.
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~--------------------------------~kpk~~~~~~ 86 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG--------------------------------VVDKLSAAEE 86 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS--------------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc--------------------------------cCChHHHHHH
Confidence 46677777899999999999999999999998766654 2999999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHh---HHHHHHHHHh
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIH---NIKEAIPEIW 243 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~---el~~~l~~~~ 243 (265)
++++++++|+++++|||+.+|+.+++.+|+.+++.+.... +..+++++.+.. .+.++++.++
T Consensus 87 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~~~g~~~e~~~~ll 152 (164)
T 3e8m_A 87 LCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLSTIFLEKRGGEGVFREFVEKVL 152 (164)
T ss_dssp HHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCTTSCHHHHTTCSSCCCCCTTTTHHHHHHHHHT
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcCChHHHHHHhCcEEeccCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999997665443222 556888888732 1555555554
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.80 E-value=3.8e-19 Score=140.53 Aligned_cols=99 Identities=16% Similarity=0.238 Sum_probs=89.1
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCC-hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNAD-QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~-~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
....++||+.++|+.+ +.+++|+||++ ...++..++.+++..+|+.++...
T Consensus 65 ~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~~------------------------- 119 (187)
T 2wm8_A 65 QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYP------------------------- 119 (187)
T ss_dssp CEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEESS-------------------------
T ss_pred cccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEEe-------------------------
Confidence 3567899999999887 58999999999 689999999999999999875533
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+|+++.++.+++++|++|++|++|||+.+|+.+|+++|+.++++.++.
T Consensus 120 ---~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~~g~ 167 (187)
T 2wm8_A 120 ---GSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGM 167 (187)
T ss_dssp ---SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSSC
T ss_pred ---CchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEECCCC
Confidence 778899999999999999999999999999999999999999999874
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-20 Score=146.95 Aligned_cols=106 Identities=10% Similarity=0.097 Sum_probs=87.2
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.++..+++++|+|+.....++..++.+|+. ++.+ .|||+..++.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~----------------------------~~~k~~~l~~ 93 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG----------------------------IDRKDLALKQ 93 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES----------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC----------------------------CCChHHHHHH
Confidence 567777888999999999999999999999976 2322 2999999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC------HhHHHHHHHH
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIPE 241 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~------~~el~~~l~~ 241 (265)
+++++|++++++++|||+.||+.+++.+|+.+++ .++.. +..+++++.+ +.++.++|..
T Consensus 94 ~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 94 WCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDVVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred HHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999986554 33322 4568899988 6777766643
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.80 E-value=2.6e-20 Score=143.77 Aligned_cols=109 Identities=19% Similarity=0.209 Sum_probs=86.8
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 182 (265)
.+.++..+.+++|+||.+...++..++.+|+..+|+. +||++..++.+
T Consensus 45 l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~--------------------------------~kp~~~~~~~~ 92 (162)
T 2p9j_A 45 IKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG--------------------------------SYKKLEIYEKI 92 (162)
T ss_dssp HHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC--------------------------------C--CHHHHHHH
T ss_pred HHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC--------------------------------CCCCHHHHHHH
Confidence 3444455789999999999999999999998766643 29999999999
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH---HHHHHHHHhc
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWE 244 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e---l~~~l~~~~~ 244 (265)
+++++++|+++++|||+.+|+.+|+.+|+.+++. ++.. ...+++++.++.+ +.++++.+++
T Consensus 93 ~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~~~~~~~~~ 158 (162)
T 2p9j_A 93 KEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALREVAELIHF 158 (162)
T ss_dssp HHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHHHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999986644 3322 3458999999876 5566666653
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.79 E-value=7.1e-20 Score=136.77 Aligned_cols=91 Identities=18% Similarity=0.198 Sum_probs=82.6
Q ss_pred HhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHH
Q 024578 106 LLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRI 185 (265)
Q Consensus 106 l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~ 185 (265)
++..+.+++|+||++...++..++.+++..+|+.++++++.+.. ||+++.++.++++
T Consensus 30 L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-----------------------Kp~~~~~~~~~~~ 86 (137)
T 2pr7_A 30 AKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELGVE-----------------------KPEEAAFQAAADA 86 (137)
T ss_dssp HHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHSCC-----------------------TTSHHHHHHHHHH
T ss_pred HHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCCCC-----------------------CCCHHHHHHHHHH
Confidence 34447899999999999999999999999999999998876654 9999999999999
Q ss_pred cCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 186 ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 186 lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
+|++|+++++|||+.+|+.+|+++|+.++++.++
T Consensus 87 ~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 87 IDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp TTCCGGGEEEEESCHHHHHHHHHHTCEEEECSCH
T ss_pred cCCCcccEEEEcCCHHHHHHHHHCCCEEEEeCCh
Confidence 9999999999999999999999999999998765
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.5e-19 Score=150.67 Aligned_cols=135 Identities=15% Similarity=0.137 Sum_probs=100.8
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++||+.++++.+ +.+++|+||+....++.+++.+|+..+|+..+...+... .+.+.....
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~d~~~-------------tg~~~~~~~ 241 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKL-------------TGQVLGEVV 241 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEE-------------EEEEESCCC
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEeeCCee-------------eeeeccccc
Confidence 3467899999998877 689999999999999999999999887776542211000 000011112
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHHHHh
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIPEIW 243 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~~~~ 243 (265)
.+|||+++++.+++++|++|++|++|||+.||+.|++.+|+.+++ ++.. +..+++++ .++.++..+|...+
T Consensus 242 ~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l 316 (335)
T 3n28_A 242 SAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAAL 316 (335)
T ss_dssp CHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHH
T ss_pred ChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHH
Confidence 259999999999999999999999999999999999999998777 3322 44556544 56777777777665
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.1e-20 Score=155.07 Aligned_cols=74 Identities=16% Similarity=0.308 Sum_probs=65.3
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHHHHH
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAI 239 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l 239 (265)
...+|||+.+++.+++++|++|++|++|||+. ||+.|++.+|+.++++.++.. ...++++++++.|+.+.|
T Consensus 186 ~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~l 265 (271)
T 2x4d_A 186 EVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLL 265 (271)
T ss_dssp EEESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHHH
T ss_pred eeccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHHH
Confidence 34579999999999999999999999999998 999999999999999988732 245899999999999887
Q ss_pred HHH
Q 024578 240 PEI 242 (265)
Q Consensus 240 ~~~ 242 (265)
.+.
T Consensus 266 ~~~ 268 (271)
T 2x4d_A 266 LQH 268 (271)
T ss_dssp HHH
T ss_pred Hhh
Confidence 654
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.78 E-value=4.9e-20 Score=146.05 Aligned_cols=107 Identities=13% Similarity=0.201 Sum_probs=88.3
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.++..+++++|+|+.....++..++.+|+..+|+.+ ++|++.++.
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~--------------------------------~~K~~~~~~ 101 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR--------------------------------EDKLVVLDK 101 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC--------------------------------SCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc--------------------------------CChHHHHHH
Confidence 567777888999999999999999999999988777652 556799999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC------HhHHHHHHHH
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIPE 241 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~------~~el~~~l~~ 241 (265)
+++++|++|++|++|||+.||+.+++.+|+.+++. ++.. ...+++++.+ +.++.+.+..
T Consensus 102 ~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~ 168 (189)
T 3mn1_A 102 LLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILS 168 (189)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHH
T ss_pred HHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999875543 3322 4568898888 5666666544
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-19 Score=141.60 Aligned_cols=102 Identities=19% Similarity=0.340 Sum_probs=84.9
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCC---------------ChhHHHHHHhHhCCccccceeeec-----CCCCCCC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNA---------------DQKHAMEVLGRLGLEDCFEGIICF-----ETINPRL 150 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~---------------~~~~~~~~l~~~~~~~~fd~i~~~-----~~~~~~~ 150 (265)
....++||+.++|+.| +++++|+||+ ....+...++.+++. |+.++.+ ++.+.
T Consensus 39 ~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~~~~~~~-- 114 (176)
T 2fpr_A 39 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPADECDC-- 114 (176)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGGCCSS--
T ss_pred HHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCCcccccc--
Confidence 3467899999998877 5889999998 567788899999987 8888754 55554
Q ss_pred CCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 151 QPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+||++++|+.+++++|++|++++||||+.+|+.+|+++|+.++++.++.
T Consensus 115 ---------------------~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~~ 163 (176)
T 2fpr_A 115 ---------------------RKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 163 (176)
T ss_dssp ---------------------STTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred ---------------------cCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCCc
Confidence 4999999999999999999999999999999999999999999998773
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-19 Score=150.95 Aligned_cols=121 Identities=18% Similarity=0.123 Sum_probs=95.3
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHH--HHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHA--MEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~--~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++|++.++++.+ +.++ |+||.+.... ...+.. .++..+|+.+++++....
T Consensus 128 ~~~~~~~~~~~l~~L~~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~--------------------- 185 (263)
T 1zjj_A 128 PDLTYEKLKYATLAIRNGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVEPIII--------------------- 185 (263)
T ss_dssp TTCBHHHHHHHHHHHHTTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEEC---------------------
T ss_pred CCCCHHHHHHHHHHHHCCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCCccEe---------------------
Confidence 356789999988766 4666 9999877544 223333 445567888887776544
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC------C--CCCCceecCHhHHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP------V--PPADHALNSIHNIKEAIP 240 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~------~--~~a~~~v~~~~el~~~l~ 240 (265)
+||++.+|+.++++ ++|++++||||+. +|+.+|+++|+.++++.++.. . ..++++++++.++.++|.
T Consensus 186 --~KP~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l~ 261 (263)
T 1zjj_A 186 --GKPNEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYLK 261 (263)
T ss_dssp --STTSHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGGC
T ss_pred --cCCCHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHHh
Confidence 59999999999999 9999999999996 999999999999999988754 1 279999999999987664
Q ss_pred H
Q 024578 241 E 241 (265)
Q Consensus 241 ~ 241 (265)
+
T Consensus 262 ~ 262 (263)
T 1zjj_A 262 T 262 (263)
T ss_dssp -
T ss_pred h
Confidence 3
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.3e-19 Score=149.31 Aligned_cols=71 Identities=27% Similarity=0.418 Sum_probs=62.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCC-----CC---CCCceecCHhHHHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP-----VP---PADHALNSIHNIKEAIPE 241 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~-----~~---~a~~~v~~~~el~~~l~~ 241 (265)
.+||++.+++.+++++|++++++++|||+ .||+.|++.+|+.++++.+|.. +. .||++++++.||.+-++.
T Consensus 181 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v~~~~~el~~~~~~ 260 (266)
T 3pdw_A 181 IGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHAIDSLTEWIPYIEG 260 (266)
T ss_dssp CSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEEESSGGGGHHHHHH
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEeCCHHHHHHHhhc
Confidence 36999999999999999999999999999 7999999999999999997753 22 599999999999887654
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.76 E-value=3.4e-18 Score=148.91 Aligned_cols=137 Identities=20% Similarity=0.199 Sum_probs=111.8
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccc--eeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE--GIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
...++||+.++|+.| +++++|+||++...+...++.+|+..+|+ .++++++.... +..++...
T Consensus 213 ~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~------------~~~~~~~k 280 (384)
T 1qyi_A 213 ILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA------------ENMYPQAR 280 (384)
T ss_dssp BSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH------------HHHSTTSC
T ss_pred CCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc------------cccccccc
Confidence 467899999999887 58999999999999999999999999999 88887764310 00000000
Q ss_pred cCCCCCHHHHHHHHHHcC--------------CCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---------CCCCC
Q 024578 170 ILCKPSLEAIETAIRIAN--------------VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------VPPAD 226 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg--------------~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---------~~~a~ 226 (265)
..+||+|++|..+++++| ++|++|++|||+.+|+.+|+++|+.++++.++.. ...++
T Consensus 281 p~~KP~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad 360 (384)
T 1qyi_A 281 PLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHAD 360 (384)
T ss_dssp CCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCS
T ss_pred CCCCCCHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCC
Confidence 014999999999999999 8999999999999999999999999999988752 24799
Q ss_pred ceecCHhHHHHHHHHHh
Q 024578 227 HALNSIHNIKEAIPEIW 243 (265)
Q Consensus 227 ~~v~~~~el~~~l~~~~ 243 (265)
++++++.+|.++|...+
T Consensus 361 ~vi~sl~eL~~~l~~~~ 377 (384)
T 1qyi_A 361 YVINHLGELRGVLDNLL 377 (384)
T ss_dssp EEESSGGGHHHHHSCTT
T ss_pred EEECCHHHHHHHHHHHH
Confidence 99999999998775544
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.75 E-value=8e-19 Score=139.64 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=89.0
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 182 (265)
.+.|+..+++++|+||.....++..++.+|+..+|+. .|||+..++.+
T Consensus 61 l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~--------------------------------~k~k~~~~~~~ 108 (195)
T 3n07_A 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG--------------------------------QDDKVQAYYDI 108 (195)
T ss_dssp HHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS--------------------------------CSSHHHHHHHH
T ss_pred HHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC--------------------------------CCCcHHHHHHH
Confidence 5667777899999999999999999999998765542 29999999999
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCH------hHHHHHHHHHhcCCh
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI------HNIKEAIPEIWEGEG 247 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~------~el~~~l~~~~~~~~ 247 (265)
++++|++|+++++|||+.||+.+++.+|+.+++ .++.. +..+++++.+. .++.+.+......+.
T Consensus 109 ~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~~~~~~ad~v~~~~~~~G~~~~~~~~il~~~~~~~ 180 (195)
T 3n07_A 109 CQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHPLLAQRANYVTHIKGGHGAVREVCDLILQARNELD 180 (195)
T ss_dssp HHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCHHHHHHCSEECSSCTTTTHHHHHHHHHHHHTTSSC
T ss_pred HHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHHHHHHhCCEEEcCCCCCCHHHHHHHHHHHhcccHH
Confidence 999999999999999999999999999987554 33322 45688888763 455555555444333
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-20 Score=149.64 Aligned_cols=175 Identities=16% Similarity=0.103 Sum_probs=116.9
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhccc
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKL 91 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (265)
.|+|+||+||||+|+...+..++.+ .++ |.+............. ..+... .....+.+.+.+.+..
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~-----~~~--g~~~~~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~ 67 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRR-----RFP--EEPHVPLEQRRGFLAR------EQYRAL-RPDLADKVASVYEAPG 67 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHH-----HST--TSCCCCGGGCCSSCHH------HHHHHH-CTTHHHHHHHHHTSTT
T ss_pred CcEEEEECCCcCccchhHHHHHHHH-----Hhc--CCCCCCHHHHHHhhHH------HHHHHH-hHHHHHHHHHHHHhcC
Confidence 4799999999999987777666654 222 4331110000000000 001111 1111234444454432
Q ss_pred cCCCCCCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 92 PYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 92 ~~~~~~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
......++||+.++|+.+ +.+++|+||+....++..++.+|+ |+.++++
T Consensus 68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~------------------------ 120 (193)
T 2i7d_A 68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP------------------------ 120 (193)
T ss_dssp TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH------------------------
T ss_pred ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH------------------------
Confidence 234678899999998876 467999999999888899999887 7776642
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhc----HHHHH-HcCceEEEECCCCCCC---CCCc-eecCH-hHHHH
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN----IASAK-AAGLHTVIVGSSVPVP---PADH-ALNSI-HNIKE 237 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~D----i~~a~-~aG~~~i~~~~~~~~~---~a~~-~v~~~-~el~~ 237 (265)
.+++++|++|++|++|||+.+| +.+|+ ++|+.++++.++.+.. .+++ ++.++ +++.+
T Consensus 121 -------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 187 (193)
T 2i7d_A 121 -------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWSDNWRE 187 (193)
T ss_dssp -------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTTSCHHH
T ss_pred -------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHHHHHHH
Confidence 2678899999999999999998 99999 9999999998754321 2344 68999 66766
Q ss_pred HHH
Q 024578 238 AIP 240 (265)
Q Consensus 238 ~l~ 240 (265)
+|.
T Consensus 188 ~~~ 190 (193)
T 2i7d_A 188 ILD 190 (193)
T ss_dssp HHH
T ss_pred Hhh
Confidence 654
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=8e-18 Score=132.20 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=82.7
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.++..+.+++|+|+.+...+...++.+++..+|+. +|||+..++.
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~--------------------------------~k~k~~~~~~ 90 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG--------------------------------KLEKETACFD 90 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES--------------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC--------------------------------CCCcHHHHHH
Confidence 44555666899999999999999999999998765532 2999999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHh
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIH 233 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~ 233 (265)
+++++|++|+++++|||+.||+.+++.+|+.+++.+.... +..+++++.+..
T Consensus 91 ~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~~~~~~~~~~ad~v~~~~~ 143 (180)
T 1k1e_A 91 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 143 (180)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCT
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeCCccHHHHhhCCEEecCCC
Confidence 9999999999999999999999999999998775432211 467899988753
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=3.6e-19 Score=151.39 Aligned_cols=124 Identities=19% Similarity=0.201 Sum_probs=96.8
Q ss_pred CCCCChhHHHHHhcCC--CcEEEEeCCChhHH--H-HHHhHhC-CccccceeeecCCCCCCCCCCCCCCCcccCcCCcCc
Q 024578 95 KLKPDPVLRNLLLSMP--QRKIIFTNADQKHA--M-EVLGRLG-LEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQ 168 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~--~-~~l~~~~-~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (265)
...++|++.++++.++ ..++++||.+.... . ..+..+| +..+|+.+++++....
T Consensus 154 ~~~~~~~~~~~l~~l~~~g~~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-------------------- 213 (306)
T 2oyc_A 154 EHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVV-------------------- 213 (306)
T ss_dssp TTCCHHHHHHHHHHHTSTTSEEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCCCEEC--------------------
T ss_pred CCCCHHHHHHHHHHHHcCCCEEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCCceee--------------------
Confidence 4456789998888763 23889999876543 1 2333444 5566777777766544
Q ss_pred ccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCCC--------------CCCCceecCHh
Q 024578 169 RILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVPV--------------PPADHALNSIH 233 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~~--------------~~a~~~v~~~~ 233 (265)
+||++.+++.+++++|++|++|++|||+. +|+.+|+.+|+.++++.+|... ..++++++++.
T Consensus 214 ---~KP~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~ 290 (306)
T 2oyc_A 214 ---GKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIA 290 (306)
T ss_dssp ---STTSTHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGG
T ss_pred ---CCCCHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHH
Confidence 59999999999999999999999999997 9999999999999999887541 46899999999
Q ss_pred HHHHHHHH
Q 024578 234 NIKEAIPE 241 (265)
Q Consensus 234 el~~~l~~ 241 (265)
||.+.+++
T Consensus 291 el~~~l~~ 298 (306)
T 2oyc_A 291 DLTEGLED 298 (306)
T ss_dssp GGGGGC--
T ss_pred HHHHHHHh
Confidence 98876543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.75 E-value=1.4e-18 Score=146.38 Aligned_cols=125 Identities=10% Similarity=0.076 Sum_probs=94.2
Q ss_pred CCChhHHHHHhcC----CCcEEEEeCC---------------------ChhHHHHHHhHhCCcccccee----------e
Q 024578 97 KPDPVLRNLLLSM----PQRKIIFTNA---------------------DQKHAMEVLGRLGLEDCFEGI----------I 141 (265)
Q Consensus 97 ~~~p~~~~~l~~l----~~~~~i~s~~---------------------~~~~~~~~l~~~~~~~~fd~i----------~ 141 (265)
.+.+++.++++.+ +.++.+.|+. ....+...++.+|+..+|..+ +
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 201 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCce
Confidence 4567888887766 6677777766 455667777888876665543 2
Q ss_pred ecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 142 CFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
+.+... .+++|+..++.+++++|++|++|++|||+.||+.+++.+|+. +.+.++..
T Consensus 202 ~~~~~~-----------------------~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~-~~~~~~~~ 257 (289)
T 3gyg_A 202 DVDFIP-----------------------IGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNG-YLLKNATQ 257 (289)
T ss_dssp EEEEEE-----------------------SCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEE-EECTTCCH
T ss_pred EEEEEe-----------------------CCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcE-EEECCccH
Confidence 333222 258999999999999999999999999999999999999965 44444432
Q ss_pred --CCCCCceecCHhH--HHHHHHHHhcC
Q 024578 222 --VPPADHALNSIHN--IKEAIPEIWEG 245 (265)
Q Consensus 222 --~~~a~~~v~~~~e--l~~~l~~~~~~ 245 (265)
+..+++++.+..+ +.+.|.++++.
T Consensus 258 ~~~~~a~~v~~~~~~~gv~~~~~~~~~~ 285 (289)
T 3gyg_A 258 EAKNLHNLITDSEYSKGITNTLKKLIGF 285 (289)
T ss_dssp HHHHHCCCBCSSCHHHHHHHHHHHHTCC
T ss_pred HHHHhCCEEcCCCCcCHHHHHHHHHHHH
Confidence 4458899988877 88888888764
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=2.3e-18 Score=136.60 Aligned_cols=113 Identities=16% Similarity=0.237 Sum_probs=90.8
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 182 (265)
.+.|+..+++++|+||.+...+...++.+|+..+|+. .|||++.++.+
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~--------------------------------~kpk~~~~~~~ 102 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKG--------------------------------QVDKRSAYQHL 102 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECS--------------------------------CSSCHHHHHHH
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeC--------------------------------CCChHHHHHHH
Confidence 4566777899999999999999999999998766553 28999999999
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC------HhHHHHHHHHHhcCChh
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS------IHNIKEAIPEIWEGEGE 248 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~------~~el~~~l~~~~~~~~~ 248 (265)
++++|++|+++++|||+.||+.+++.+|+.++ +.++.. ...+++++.+ +.++.+.+......+..
T Consensus 103 ~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~-~~~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~ 175 (191)
T 3n1u_A 103 KKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVA-VSNAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAEL 175 (191)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHH
T ss_pred HHHhCCCHHHEEEECCCHHHHHHHHHCCCEEE-eCCccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHH
Confidence 99999999999999999999999999999864 444332 4568888888 55666666554444333
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=145.57 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=90.2
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
...++||+.++|+.| +.+++|+||.+...+...++.+|+..+|+.++.
T Consensus 161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~----------------------------- 211 (287)
T 3a1c_A 161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP----------------------------- 211 (287)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT-----------------------------
T ss_pred ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh-----------------------------
Confidence 457899999998877 589999999999999999999999888876541
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
++| ..++++++.. ++|++|||+.+|+.+++++|+. +.+.++.. ...+++++ +++.++.+++.
T Consensus 212 -~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~-v~~~~~~~~~~~~ad~v~~~~~~~~l~~~l~ 277 (287)
T 3a1c_A 212 -HQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLG-IAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 277 (287)
T ss_dssp -TCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEE-EEECCCSCCSSCCSSEEESSSCTHHHHHHHH
T ss_pred -HHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCee-EEeCCCCHHHHhhCCEEEeCCCHHHHHHHHH
Confidence 332 5678889998 9999999999999999999997 44444322 55789999 99999887664
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.6e-20 Score=153.49 Aligned_cols=114 Identities=18% Similarity=0.144 Sum_probs=91.9
Q ss_pred CChhHHHHHhcCCCcEEEEeCCChhHH--H--HHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 98 PDPVLRNLLLSMPQRKIIFTNADQKHA--M--EVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 98 ~~p~~~~~l~~l~~~~~i~s~~~~~~~--~--~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
.++++.+.|+..+.+ +|+||.+.... . ..++..++..+|+.++++++... +|
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~-----------------------~K 204 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRF-----------------------GK 204 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEE-----------------------ST
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEe-----------------------cC
Confidence 455666666666788 99999987655 3 22356677788999888877655 49
Q ss_pred CCHHHHHHHHHHc----CCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC-----C-------CCCCceecCHhHH
Q 024578 174 PSLEAIETAIRIA----NVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP-----V-------PPADHALNSIHNI 235 (265)
Q Consensus 174 p~~~~~~~~~~~l----g~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~-----~-------~~a~~~v~~~~el 235 (265)
|++.+|+.+++++ |++|++|+||||+. +|+.+|+++|+.++++.++.. . ..++++++++.||
T Consensus 205 P~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 205 PDSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp TSSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred CCHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 9999999999999 99999999999996 999999999999999988753 1 4678888887764
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-19 Score=144.49 Aligned_cols=175 Identities=15% Similarity=0.115 Sum_probs=118.3
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCC-CChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhc
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLH-IDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHG 89 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (265)
++|+|+||+||||+|+...+..++.+.+ +.++ ......... .... .+.... ....+.+...+.+
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~-------~~~~~~-~~~~~~~~~~~~~ 67 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARF-----PDQPFIALEDRRGF--WVSE-------QYGRLR-PGLSEKAISIWES 67 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHC-----TTSCCCCGGGCCSS--CHHH-------HHHHHS-TTHHHHHHHHHTS
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHH-----hcCCCCCHHHhcCC--cHHH-------HHHhcC-HHHHHHHHHHHHh
Confidence 4689999999999998877777776533 3322 111110000 0000 011010 1111233334433
Q ss_pred cccCCCCCCChhHHHHHhcC----CCcEEEEeCCChhHHHHHHhHhCCcc-ccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 90 KLPYEKLKPDPVLRNLLLSM----PQRKIIFTNADQKHAMEVLGRLGLED-CFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 90 ~~~~~~~~~~p~~~~~l~~l----~~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
........++||+.++|+.| +++++|+||+....++..++.+++.. +|+ .
T Consensus 68 ~~~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~---------~---------------- 122 (197)
T 1q92_A 68 KNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG---------P---------------- 122 (197)
T ss_dssp TTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC---------G----------------
T ss_pred hhhhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch---------H----------------
Confidence 32234678999999998876 46899999999888888899888877 776 1
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhc----HHHHH-HcCceEEEECCCCCCC---CCCc-eecCH-hH
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARN----IASAK-AAGLHTVIVGSSVPVP---PADH-ALNSI-HN 234 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~D----i~~a~-~aG~~~i~~~~~~~~~---~a~~-~v~~~-~e 234 (265)
.+++++|++|++|++|||+..| +.+|+ ++|+.++++.++.+.. .+++ ++.++ ++
T Consensus 123 ----------------~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~ 186 (197)
T 1q92_A 123 ----------------DFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADD 186 (197)
T ss_dssp ----------------GGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSC
T ss_pred ----------------HHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHH
Confidence 3667889999999999999998 99999 9999999998765422 2334 79999 58
Q ss_pred HHHHHHH
Q 024578 235 IKEAIPE 241 (265)
Q Consensus 235 l~~~l~~ 241 (265)
+.++|..
T Consensus 187 l~~~l~~ 193 (197)
T 1q92_A 187 WKAILDS 193 (197)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 8887763
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.2e-18 Score=140.33 Aligned_cols=96 Identities=20% Similarity=0.219 Sum_probs=76.2
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCC---CCCCCCCCCCCCCcccCcCCcCccc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFET---INPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.+.|++.++++.+ +++++|+||.........++. +..+|+.++.+.+ ...
T Consensus 88 ~~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~~~~~---------------------- 143 (211)
T 2b82_A 88 IPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPVIFAG---------------------- 143 (211)
T ss_dssp EECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCCEECC----------------------
T ss_pred CCcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchhhhcC----------------------
Confidence 3578888888877 589999999987665555555 4456777643221 222
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP 221 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~ 221 (265)
.||+++.+..+++++|+ |++|||+.+|+.+|+++|+.++++.++..
T Consensus 144 -~KP~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 144 -DKPGQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp -CCTTCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred -CCCCHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 39999999999999998 99999999999999999999999988754
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-17 Score=129.86 Aligned_cols=99 Identities=16% Similarity=0.213 Sum_probs=83.4
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
+.+.++..+.+++|+||.+...++..++.+|+..+|+. +|||+..++.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~~~--------------------------------~kpk~~~~~~ 108 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQG--------------------------------QSNKLIAFSD 108 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEECS--------------------------------CSCSHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceeecC--------------------------------CCCCHHHHHH
Confidence 55667777899999999999999999999998765532 3999999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCH
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSI 232 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~ 232 (265)
+++++|++|+++++|||+.+|+.+++.+|+.+++.+.... ...+++++.+.
T Consensus 109 ~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~~~~~~~~~~ad~v~~~~ 160 (188)
T 2r8e_A 109 LLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA 160 (188)
T ss_dssp HHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECTTSCTTTGGGSSEECSSC
T ss_pred HHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEecCcCHHHHhcCCEEEeCC
Confidence 9999999999999999999999999999998765433222 44689999886
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.73 E-value=1.5e-17 Score=135.76 Aligned_cols=107 Identities=18% Similarity=0.161 Sum_probs=78.8
Q ss_pred EEEe-CCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCc
Q 024578 114 IIFT-NADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKK 192 (265)
Q Consensus 114 ~i~s-~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 192 (265)
.+++ +.....+...++.++ ..|+.+ ++... .+....++||+..++.+++++|+++++
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~-------------------~ei~~~~~~K~~~~~~~~~~~~~~~~~ 171 (231)
T 1wr8_A 114 VIMRETINVETVREIINELN--LNLVAV-DSGFA-------------------IHVKKPWINKGSGIEKASEFLGIKPKE 171 (231)
T ss_dssp EECTTTSCHHHHHHHHHHTT--CSCEEE-ECSSC-------------------EEEECTTCCHHHHHHHHHHHHTSCGGG
T ss_pred EEECCCCCHHHHHHHHHhcC--CcEEEE-ecCcE-------------------EEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 4555 446667777777764 446655 33211 001112599999999999999999999
Q ss_pred EEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 193 TIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 193 ~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+++|||+.||+.|++.+|+. +.+.++.. +..|++++.+..+ +.+.|++++
T Consensus 172 ~~~iGD~~nD~~~~~~ag~~-v~~~~~~~~~~~~a~~v~~~~~e~Gv~~~l~~~~ 225 (231)
T 1wr8_A 172 VAHVGDGENDLDAFKVVGYK-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHIL 225 (231)
T ss_dssp EEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred EEEECCCHHHHHHHHHcCCe-EEecCCCHHHHhhCCEEecCCCcchHHHHHHHHH
Confidence 99999999999999999997 55665543 4578999998876 888887765
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.72 E-value=7.2e-18 Score=141.15 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=60.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEG 245 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~~ 245 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+.++ +.+.|++++..
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 4dw8_A 195 GIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLTNDEDGVAEAIERIFNV 271 (279)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCGGGTHHHHHHHHHC--
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCCCCCcHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999999975444 44332 5568999988776 88888888654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.1e-18 Score=145.25 Aligned_cols=67 Identities=16% Similarity=0.298 Sum_probs=60.0
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIK 236 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~ 236 (265)
..+||++.+++.+++++|++|+++++|||+ .+|+.+|+.+|+.++++.+|.. ...++++++++.+|.
T Consensus 179 ~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~~~~l~~l~ 254 (264)
T 3epr_A 179 FIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWT 254 (264)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEEESCGGGCC
T ss_pred cCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHh
Confidence 346999999999999999999999999999 6999999999999999988753 127999999998875
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.6e-18 Score=142.59 Aligned_cols=111 Identities=20% Similarity=0.254 Sum_probs=86.7
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
.++||+.++++.+ +.+++|+|+.....++..++.+|+..+|+.+++.+
T Consensus 144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~~----------------------------- 194 (280)
T 3skx_A 144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPHE----------------------------- 194 (280)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGGG-----------------------------
T ss_pred CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHHH-----------------------------
Confidence 6789999988776 58999999999999999999999999888877543
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-CCCCCCCcee--cCHhHHHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-VPVPPADHAL--NSIHNIKEAIPEI 242 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~~~~~a~~~v--~~~~el~~~l~~~ 242 (265)
|....+...+.+ ++++|||+.||+.|++.+|+.+++.+.. .....+++++ +++.++.+++..-
T Consensus 195 -k~~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~ 260 (280)
T 3skx_A 195 -KAEKVKEVQQKY-----VTAMVGDGVNDAPALAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELS 260 (280)
T ss_dssp -HHHHHHHHHTTS-----CEEEEECTTTTHHHHHHSSEEEECSCCSSSCCCSSSEECSSCCTHHHHHHHHHH
T ss_pred -HHHHHHHHHhcC-----CEEEEeCCchhHHHHHhCCceEEecCCcHHHHhhCCEEEeCCCHHHHHHHHHHH
Confidence 244444555443 7899999999999999999855543322 2255678877 8999999887643
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-17 Score=140.49 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEG 245 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~~ 245 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+.++ +.+.|++++..
T Consensus 200 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~s~~edGv~~~i~~~~~~ 276 (290)
T 3dnp_A 200 GVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVTRSNDEQGVAYMMKEYFRM 276 (290)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCTTTTHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEECCCCCccHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999985544 44332 6679999999888 99999888753
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.71 E-value=5.4e-17 Score=127.27 Aligned_cols=168 Identities=13% Similarity=0.132 Sum_probs=106.4
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHHHhcc
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGK 90 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (265)
|+|+|+||+||||+|+.+.+..++.+ .+|.+..... . .+...... ++ ...+.+.+.+...
T Consensus 3 m~~~viFD~DGtL~Ds~~~~~~~~~~--------~~g~~~~~~~-~-------~g~~~~~~--~~--~~~~~~~~~~~~~ 62 (180)
T 3bwv_A 3 TRQRIAIDMDEVLADTLGAVVKAVNE--------RADLNIKMES-L-------NGKKLKHM--IP--EHEGLVMDILKEP 62 (180)
T ss_dssp CCCEEEEETBTTTBCHHHHHHHHHHH--------HSCCCCCGGG-C-------TTCCC------------CHHHHHHHST
T ss_pred cccEEEEeCCCcccccHHHHHHHHHH--------HhCCCCCHHH-H-------cCccHHHH--CC--chHHHHHHHHhCc
Confidence 45899999999999977766665542 4455322110 0 01111100 01 1122333333322
Q ss_pred ccCCCCCCChhHHHHHhcCC--CcEEEEeCC---Chh--HHHHHHhH-hCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 91 LPYEKLKPDPVLRNLLLSMP--QRKIIFTNA---DQK--HAMEVLGR-LGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 91 ~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~---~~~--~~~~~l~~-~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
......+++||+.++|+.|+ ++++|+||. ... .....+.. ++...+|+.++++++
T Consensus 63 ~~~~~~~~~pg~~e~L~~L~~~~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~----------------- 125 (180)
T 3bwv_A 63 GFFRNLDVMPHAQEVVKQLNEHYDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK----------------- 125 (180)
T ss_dssp TGGGSCCBCTTHHHHHHHHTTTSEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG-----------------
T ss_pred chhccCCCCcCHHHHHHHHHhcCCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc-----------------
Confidence 22346789999999999884 789999998 322 22444555 455566777777652
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhHHHHHHHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~el~~~l~~ 241 (265)
. ++ ++|++|||+.+++. .++| .+++++++.+ ...++++++++.||.++|.+
T Consensus 126 -----------~----------~l----~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~~~~~~~i~~~~el~~~l~~ 177 (180)
T 3bwv_A 126 -----------N----------II----LADYLIDDNPKQLE--IFEG-KSIMFTASHNVYEHRFERVSGWRDVKNYFNS 177 (180)
T ss_dssp -----------G----------GB----CCSEEEESCHHHHH--HCSS-EEEEECCGGGTTCCSSEEECSHHHHHHHHHH
T ss_pred -----------C----------ee----cccEEecCCcchHH--HhCC-CeEEeCCCcccCCCCceecCCHHHHHHHHHH
Confidence 0 11 77999999999985 5689 9999986543 35688999999999998876
Q ss_pred Hh
Q 024578 242 IW 243 (265)
Q Consensus 242 ~~ 243 (265)
+.
T Consensus 178 ~~ 179 (180)
T 3bwv_A 178 IE 179 (180)
T ss_dssp HC
T ss_pred hh
Confidence 53
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.70 E-value=5e-18 Score=141.30 Aligned_cols=71 Identities=30% Similarity=0.422 Sum_probs=63.2
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCC-hhcHHHHHHcCceEEEECCCCCC------------CCCCceecCHhHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDS-ARNIASAKAAGLHTVIVGSSVPV------------PPADHALNSIHNIK 236 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~-~~Di~~a~~aG~~~i~~~~~~~~------------~~a~~~v~~~~el~ 236 (265)
..+||++.+++.+++++|++|+++++|||+ .+|+.+|+.+|+.++++.++... ..++++++++.+|.
T Consensus 184 ~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el~ 263 (268)
T 3qgm_A 184 VVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDMV 263 (268)
T ss_dssp ECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHHH
T ss_pred ecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHHH
Confidence 457999999999999999999999999999 59999999999999999887542 26999999999998
Q ss_pred HHHH
Q 024578 237 EAIP 240 (265)
Q Consensus 237 ~~l~ 240 (265)
++|.
T Consensus 264 ~~l~ 267 (268)
T 3qgm_A 264 EALE 267 (268)
T ss_dssp HTC-
T ss_pred HHHh
Confidence 8764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.69 E-value=5.7e-17 Score=135.08 Aligned_cols=71 Identities=20% Similarity=0.154 Sum_probs=59.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
+++|+.+++.+++++|++++++++|||+.||++|++.+|+.+++-+.... +..|++++.+.++ +.+.|+++
T Consensus 198 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~edGv~~~l~~~ 271 (274)
T 3fzq_A 198 DFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQQLKDIATSICEDIFDNGIYKELKRR 271 (274)
T ss_dssp TCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCHHHHHHCSEEECCGGGTHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccHHHHHhhhheeCCCchhHHHHHHHHh
Confidence 58999999999999999999999999999999999999976554333222 5678999988876 77777665
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.69 E-value=9.3e-17 Score=124.50 Aligned_cols=114 Identities=12% Similarity=0.080 Sum_probs=84.9
Q ss_pred HHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHH
Q 024578 102 LRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181 (265)
Q Consensus 102 ~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~ 181 (265)
..+.|+..+++++|+|+. ..++..++.+.+. ++ ++.+ +++|++.++.
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lg--i~-~~~g----------------------------~~~K~~~l~~ 90 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTLSALKLD--CK-TEVS----------------------------VSDKLATVDE 90 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCC--CC-EECS----------------------------CSCHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCC--cE-EEEC----------------------------CCChHHHHHH
Confidence 356777889999999999 6777788843222 23 2321 2788999999
Q ss_pred HHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH---HHHHHHHHhcCChhh
Q 024578 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN---IKEAIPEIWEGEGEQ 249 (265)
Q Consensus 182 ~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e---l~~~l~~~~~~~~~~ 249 (265)
+++++|++|+++++|||+.||+.+++.+|+.++ +.+... +..+++++.+..+ +.++++.++....++
T Consensus 91 ~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a-~~na~~~~k~~Ad~v~~~~~~~G~~~~~~~~il~~~~~~ 162 (168)
T 3ewi_A 91 WRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAV-PADACSGAQKAVGYICKCSGGRGAIREFAEHIFLLIEKV 162 (168)
T ss_dssp HHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEE-CTTCCHHHHTTCSEECSSCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEE-eCChhHHHHHhCCEEeCCCCCccHHHHHHHHHHHhhhhh
Confidence 999999999999999999999999999998754 554433 6778998887543 556666666544333
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.9e-16 Score=134.39 Aligned_cols=74 Identities=14% Similarity=0.097 Sum_probs=62.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhcCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGE 246 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~~~ 246 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.++ +.++.. +..|++++.+.++ +.+.|++++..+
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~va-m~na~~~~k~~Ad~v~~~~~edGv~~~l~~~~~~~ 303 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYA-MANAPKNVKAAANYQAKSNDESGVLDVIDNYLASI 303 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEE-CTTSCHHHHHHCSEECCCGGGTHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEE-cCCcCHHHHHhccEEcCCCCcchHHHHHHHHHHhc
Confidence 4788999999999999999999999999999999999997544 444433 6679999999888 999999887543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.6e-16 Score=132.18 Aligned_cols=70 Identities=16% Similarity=0.242 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+. +.+.++.. +..|++++.+.++ +.+.|+++
T Consensus 209 ~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~-vam~na~~~~k~~A~~v~~s~~edGv~~~l~~~ 282 (283)
T 3dao_A 209 GVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGIS-YAVSNARQEVIAAAKHTCAPYWENGVLSVLKSF 282 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE-EEETTSCHHHHHHSSEEECCGGGTHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCE-EEcCCCCHHHHHhcCeECCCCCCChHHHHHHHh
Confidence 57899999999999999999999999999999999999975 44454433 6679999998887 88877765
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=9.5e-18 Score=140.42 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=50.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-CCCCCceecCHhH--HHHHHHHHhcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-VPPADHALNSIHN--IKEAIPEIWEG 245 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-~~~a~~~v~~~~e--l~~~l~~~~~~ 245 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++-+.... +..|++++.+.++ +.+.|++++..
T Consensus 195 ~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~~k~~A~~v~~~~~e~Gv~~~i~~~~~~ 271 (279)
T 3mpo_A 195 RASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDEVKEAAQAVTLTNAENGVAAAIRKYALN 271 (279)
T ss_dssp SCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCHHHHHCSCBC------CHHHHHC-----
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHHHHHhcceeccCCCccHHHHHHHHHhcc
Confidence 46689999999999999999999999999999999999976544433332 5678998887766 88888777644
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.63 E-value=3.5e-17 Score=135.88 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=64.8
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAI 239 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l 239 (265)
.+-+....++||+.+++.+++++|++++++++|||+.||+.|++.+|+.+++ .++.. +..|++++.+..+ +.+.|
T Consensus 177 ~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~dGv~~~l 255 (261)
T 2rbk_A 177 AFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDEDGISKAM 255 (261)
T ss_dssp TCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGGTHHHHHH
T ss_pred CeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCchhhHHHHH
Confidence 3344455679999999999999999999999999999999999999986544 44332 4568999999999 99988
Q ss_pred HHH
Q 024578 240 PEI 242 (265)
Q Consensus 240 ~~~ 242 (265)
+++
T Consensus 256 ~~~ 258 (261)
T 2rbk_A 256 KHF 258 (261)
T ss_dssp HHH
T ss_pred HHh
Confidence 775
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=8.7e-16 Score=135.80 Aligned_cols=94 Identities=23% Similarity=0.287 Sum_probs=82.0
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCC------------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNAD------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~------------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++||+.++|+.| +++++|+||.+ ...+...++.+|+. |+.++++++....
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~~~~~~------------- 152 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGLNR------------- 152 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSTTS-------------
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECCCCCCC-------------
Confidence 789999998877 69999999965 22377788899985 9999999887764
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC----CCCCcEEEEcCCh-----------------hcHHHHHHcCceEEEE
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSA-----------------RNIASAKAAGLHTVIV 216 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg----~~~~~~i~vGD~~-----------------~Di~~a~~aG~~~i~~ 216 (265)
||++.++..+++++| ++|++|+||||+. +|+.+|+++|+.++..
T Consensus 153 ----------KP~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 153 ----------KPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp ----------TTSSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred ----------CCCHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence 999999999999997 9999999999997 7999999999998744
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.9e-16 Score=131.25 Aligned_cols=71 Identities=13% Similarity=0.163 Sum_probs=56.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCc--eecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH--ALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~--~v~~~~e--l~~~l~~~~ 243 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.+ .+.++.. +..|++ ++.+.++ +.+.|++++
T Consensus 207 ~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~v-Am~Na~~~vk~~A~~~~v~~sn~edGva~~i~~~~ 283 (285)
T 3pgv_A 207 GVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGC-IMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLY 283 (285)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEE-ECTTSCHHHHHHCTTSEECCCGGGTHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEE-EccCCCHHHHHhCCCCEecccCCcchHHHHHHHHh
Confidence 478999999999999999999999999999999999999754 4444433 445654 6666655 787777765
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-15 Score=125.89 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=58.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
+.+|+.+++.+++++|++++++++|||+.||++|++.+|+.++ +.++.. +..|++++.+.++ +.+.|+++
T Consensus 192 ~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~va-m~na~~~~k~~Ad~v~~~~~edGv~~~l~~~ 265 (268)
T 3r4c_A 192 GTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVA-MGNASEKVQSVADFVTDTVDNSGLYKALKHF 265 (268)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEE-CTTSCHHHHHTCSEECCCTTTTHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEE-eCCCcHHHHHhcCEeeCCCCcCHHHHHHHHh
Confidence 5788999999999999999999999999999999999997644 444433 5679999988766 77777665
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.9e-16 Score=127.04 Aligned_cols=75 Identities=17% Similarity=0.179 Sum_probs=61.5
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
....+-+|+.+++.+++++|++++++++|||+.||++|++.+|+.+++ .++.. +..|++++.+.++ +.+.|+++.
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~~~dGva~~i~~~~ 255 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPVDKEGIWYGLKQLQ 255 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCGGGTHHHHHHHHTT
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCCCcchHHHHHHHhC
Confidence 334467889999999999999999999999999999999999997664 44433 5669999988766 777777654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=8e-17 Score=134.04 Aligned_cols=112 Identities=17% Similarity=0.247 Sum_probs=90.6
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..+++||+.++++.| +++++++||.+...++.+++.+|+..+|+.++.
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p----------------------------- 184 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP----------------------------- 184 (263)
Confidence 456889999999888 478999999999999999999999888877551
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC-CCCCCCCcee--cCHhHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS-VPVPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~-~~~~~a~~~v--~~~~el~~~l~ 240 (265)
. .+..++++++.++++|+||||+.||+.+++++|+..++.... .....+|+++ +++.+|.+++.
T Consensus 185 -~----~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g~~~~~~~~~ad~v~~~~~l~~l~~~l~ 251 (263)
T 2yj3_A 185 -E----DKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMGNGVDISKNVADIILVSNDIGTLLGLIK 251 (263)
Confidence 1 234688889999999999999999999999999876554321 1255789999 88888877654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=4.6e-15 Score=123.75 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhc
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWE 244 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~ 244 (265)
+++|+.+++.+++++|++++++++|||+.||+.|++.+|+.+ .+.++.. +..|++++.+.++ +.+.|++++.
T Consensus 189 ~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~v-a~~na~~~~k~~a~~v~~~~~~dGVa~~l~~~~~ 264 (271)
T 1rlm_A 189 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSF-AMGNAAENIKQIARYATDDNNHEGALNVIQAVLD 264 (271)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE-ECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeE-EeCCccHHHHHhCCeeCcCCCCChHHHHHHHHHh
Confidence 589999999999999999999999999999999999999864 4555433 4568999988766 8888888764
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.49 E-value=2.5e-14 Score=116.35 Aligned_cols=73 Identities=7% Similarity=0.008 Sum_probs=58.7
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
..+.+|+..++.+++++|++++++++|||+.||+.|++.+|+. +.+.++.. +..|++++.+..+ +.+.|++++
T Consensus 149 ~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~-va~~n~~~~~k~~a~~v~~~~~~~Gv~~~l~~~~ 225 (227)
T 1l6r_A 149 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANATDNIKAVSDFVSDYSYGEEIGQIFKHFE 225 (227)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSCHHHHHHCSEECSCCTTHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCce-EEecCchHHHHHhCCEEecCCCCcHHHHHHHHHh
Confidence 3457899999999999999999999999999999999999985 55555433 3458888877644 777776654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.47 E-value=4.5e-14 Score=118.51 Aligned_cols=75 Identities=20% Similarity=0.266 Sum_probs=61.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhcCCh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGEG 247 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~~~~ 247 (265)
+-+|+.+++.+++++|++++++++|||+.||+.|++.+|+ .+.+.++.. +..|++++.+..+ +.+.|++++....
T Consensus 196 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~n~~~~~~~~a~~v~~~~~~dGV~~~l~~~~~~~~ 274 (282)
T 1rkq_A 196 RVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGV-GVAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYVLNEG 274 (282)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHTTC--
T ss_pred CCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCc-EEEecCCcHHHHhhCCEEecCCCcchHHHHHHHHHhcCC
Confidence 5688999999999999999999999999999999999998 455655433 3468899888665 9999988875443
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-14 Score=120.74 Aligned_cols=78 Identities=15% Similarity=0.119 Sum_probs=61.7
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAI 239 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l 239 (265)
.+-+....+-+|+.+++.+++.+|++++++++|||+.||+.|++.+|+ .+.+.++.. +..|++++.+..+ +.+.|
T Consensus 206 ~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~-~va~~~~~~~~~~~a~~v~~~~~~dGVa~~i 284 (288)
T 1nrw_A 206 HNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK-GVAMGNAREDIKSIADAVTLTNDEHGVAHMM 284 (288)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE-EEECTTCCHHHHHHCSEECCCGGGTHHHHHH
T ss_pred CcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc-EEEEcCCCHHHHhhCceeecCCCcChHHHHH
Confidence 344445556789999999999999999999999999999999999998 566666543 3458888888765 66666
Q ss_pred HHH
Q 024578 240 PEI 242 (265)
Q Consensus 240 ~~~ 242 (265)
+++
T Consensus 285 ~~~ 287 (288)
T 1nrw_A 285 KHL 287 (288)
T ss_dssp HHT
T ss_pred HHh
Confidence 554
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-13 Score=114.51 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=70.7
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCC---hhHHHHHHhHhCCc--cccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNAD---QKHAMEVLGRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~---~~~~~~~l~~~~~~--~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
...++||+.++|+.+ |++++|+||.+ ...+...|+.+|+. .+|+.+++.++.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~-------------------- 158 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE-------------------- 158 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------------------
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------------------
Confidence 356889999998877 68999999988 45677788888988 667777665532
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHH-------H---------cCceEEEECCCC
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAK-------A---------AGLHTVIVGSSV 220 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~-------~---------aG~~~i~~~~~~ 220 (265)
.||.+ ...++ ..+. ..+++|||+.+|+.+|. + +|+.++.++++.
T Consensus 159 -----~K~~~--~~~~~-~~~~--~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 159 -----KGKEK--RRELV-SQTH--DIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp -----CSSHH--HHHHH-HHHE--EEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred -----CCcHH--HHHHH-HhCC--CceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 14433 33333 3343 44999999999999983 4 799999998874
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.39 E-value=3.9e-12 Score=107.66 Aligned_cols=74 Identities=14% Similarity=0.186 Sum_probs=60.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec-CHhH--HHHHHHHHhcC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN-SIHN--IKEAIPEIWEG 245 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~-~~~e--l~~~l~~~~~~ 245 (265)
.+-+|+.+++.+++.+|++++++++|||+.||+.|++.+|+. +.+.++.. +..|++++. +..+ +.+.|++++..
T Consensus 221 ~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~~~k~~a~~v~~~~~~~dGVa~~l~~~~~~ 299 (301)
T 2b30_A 221 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 299 (301)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCe-EEEcCCcHHHHhhCCEEEccCCCCcHHHHHHHHHHhc
Confidence 356889999999999999999999999999999999999985 55665543 346888887 6554 88888887654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.39 E-value=3e-13 Score=112.60 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=57.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|+.. .+.++.. +..|++++.+..+ +.+.|++++
T Consensus 188 ~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v-~~~n~~~~~~~~a~~v~~~~~~dGv~~~i~~~~ 262 (268)
T 1nf2_A 188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRV-AMENAIEKVKEASDIVTLTNNDSGVSYVLERIS 262 (268)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEE-ECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBC
T ss_pred CCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEE-EecCCCHHHHhhCCEEEccCCcchHHHHHHHHH
Confidence 478899999999999999999999999999999999999854 4444332 3358888887554 777776654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=5.4e-12 Score=108.76 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=62.1
Q ss_pred cccCCCCCHHHHHHHHHHc----------------------CC-----CCCcEEEEcCCh-hcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIA----------------------NV-----DPKKTIFFDDSA-RNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~l----------------------g~-----~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~ 219 (265)
...+|||.+.+|+.+.+.+ |+ ++++++||||+. +||.+|+++|+.++++.+|
T Consensus 241 ~~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G 320 (352)
T 3kc2_A 241 DYTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTG 320 (352)
T ss_dssp CEECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSS
T ss_pred ceEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccC
Confidence 4679999999999887654 22 679999999999 5999999999999999876
Q ss_pred CC-------CCCCCceecCHhHHHHHHHH
Q 024578 220 VP-------VPPADHALNSIHNIKEAIPE 241 (265)
Q Consensus 220 ~~-------~~~a~~~v~~~~el~~~l~~ 241 (265)
.. ...++++++++.|+.+++.+
T Consensus 321 ~~~~~~~~~~~~pd~vi~~l~el~~~il~ 349 (352)
T 3kc2_A 321 VYNEGDDLKECKPTLIVNDVFDAVTKTLE 349 (352)
T ss_dssp SCCTTCCCTTCCCSEECSSHHHHHHHHHH
T ss_pred CCCcccccccCCCCEEECCHHHHHHHHHH
Confidence 42 35789999999999987743
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.35 E-value=3.9e-13 Score=115.39 Aligned_cols=57 Identities=19% Similarity=0.155 Sum_probs=45.8
Q ss_pred CCCCCc----EEEEcCChhcHHHHHHc----CceEEEECCCCC--CCCCCceecC--HhHHHHHHHHHhcC
Q 024578 187 NVDPKK----TIFFDDSARNIASAKAA----GLHTVIVGSSVP--VPPADHALNS--IHNIKEAIPEIWEG 245 (265)
Q Consensus 187 g~~~~~----~i~vGD~~~Di~~a~~a----G~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l~~~~~~ 245 (265)
|+++++ |++|||+.||++|++.+ |+.+++ ++.. +..|++++.+ .+.+.++|++++..
T Consensus 214 gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~~~~ 282 (332)
T 1y8a_A 214 GYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELFMER 282 (332)
T ss_dssp HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHHHHH
T ss_pred ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHHHHc
Confidence 677888 99999999999999999 997665 4432 5679999877 66688888887643
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=4e-14 Score=117.27 Aligned_cols=73 Identities=16% Similarity=0.095 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHcCCCC--CcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHh--HHHHHHHHHhcCCh
Q 024578 173 KPSLEAIETAIRIANVDP--KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIH--NIKEAIPEIWEGEG 247 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~--~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~--el~~~l~~~~~~~~ 247 (265)
++|+.+++.+++++|+++ +++++|||+.||+.|++.+|+. +.+.+... -.++++..+.. .+.+.+..++....
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~na~~-~~~~~~~~~~~~~gv~~~~~~~~~~~~ 251 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLA-VYVGRGDP-PEGVLATPAPGPEGFRYAVERYLLPRL 251 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEE-EECSSSCC-CTTCEECSSCHHHHHHHHHHHHTTTC-
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCe-EEeCChhh-cCCcEEeCCCCchHHHHHHHHHHHhCc
Confidence 788999999999999999 9999999999999999999986 55544444 46777766543 38888888875543
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.31 E-value=5.2e-12 Score=106.76 Aligned_cols=98 Identities=10% Similarity=0.017 Sum_probs=82.5
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhH--------hCCccccceeeecCCCCCCCCCCCCCCCccc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGR--------LGLEDCFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~--------~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
..++||+.++|+.| |.+++|+||..... +...|+. +|+ +|+.++++++..
T Consensus 187 ~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~-------------- 250 (301)
T 1ltq_A 187 DVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQGD-------------- 250 (301)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCTTC--------------
T ss_pred cCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccCCC--------------
Confidence 45789999999877 58999999987543 4566777 788 489988877542
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCc-EEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
.||+|+.+..++++++.++.+ +++|||+.+|+.+|+++|+.++++.+|
T Consensus 251 ----------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 251 ----------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp ----------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ----------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 299999999999999887655 799999999999999999999999987
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=94.88 Aligned_cols=96 Identities=8% Similarity=0.116 Sum_probs=68.6
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh----hHHHHHHhHhCCccccc-eeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ----KHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~----~~~~~~l~~~~~~~~fd-~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
..+++||+.++++.+ |++++|+||.+. ..+...|+.+|+..+++ .++.....
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-------------------- 158 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKKDK-------------------- 158 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEESSC--------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecCCC--------------------
Confidence 467899999988776 699999999865 48888999999987664 45544321
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHH--------HHH---------cCceEEEECCC
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS--------AKA---------AGLHTVIVGSS 219 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~--------a~~---------aG~~~i~~~~~ 219 (265)
..|...++.+. ..|. ..+++|||+.+|+.+ .++ -|-+.|.++++
T Consensus 159 ------~~K~~~r~~L~-~~gy--~iv~~iGD~~~Dl~~~~~~~~~~~r~a~v~~~~~~fG~~~ivlPNp 219 (260)
T 3pct_A 159 ------SNKSVRFKQVE-DMGY--DIVLFVGDNLNDFGDATYKKSNAERRDFVAKNSKAFGKKFIVLPNT 219 (260)
T ss_dssp ------SSSHHHHHHHH-TTTC--EEEEEEESSGGGGCGGGTTCCHHHHHHHHHHTGGGBTTTEEECCCC
T ss_pred ------CChHHHHHHHH-hcCC--CEEEEECCChHHcCcccccCCHHHHHHHHHHHHHHhCCCEEEeCCC
Confidence 33455555544 4354 449999999999987 343 46667777665
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3.6e-11 Score=98.81 Aligned_cols=82 Identities=10% Similarity=0.133 Sum_probs=61.0
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh----hHHHHHHhHhCCccccc-eeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ----KHAMEVLGRLGLEDCFE-GIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~----~~~~~~l~~~~~~~~fd-~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
...++||+.++++.+ |++++|+||.+. ..+...|+.+|+..+++ .++..+..
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~~~-------------------- 158 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKKDK-------------------- 158 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEESSC--------------------
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccCCC--------------------
Confidence 457899999988776 689999999865 57888999999976663 55554321
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHH
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIAS 205 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~ 205 (265)
..|...++.+.+. |. ..+++|||+.+|+.+
T Consensus 159 ------~~K~~~r~~l~~~-Gy--~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 159 ------SAKAARFAEIEKQ-GY--EIVLYVGDNLDDFGN 188 (262)
T ss_dssp ------SCCHHHHHHHHHT-TE--EEEEEEESSGGGGCS
T ss_pred ------CChHHHHHHHHhc-CC--CEEEEECCChHHhcc
Confidence 4456666666554 44 349999999999987
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.05 E-value=1.7e-10 Score=94.82 Aligned_cols=62 Identities=11% Similarity=-0.072 Sum_probs=50.0
Q ss_pred CCCCHHHHHHHHHHcCC-CCCcEEEEcCChhcHHHHHHcCceEEEECCCC-C--CCCCCceecCHhH
Q 024578 172 CKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-P--VPPADHALNSIHN 234 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~-~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~--~~~a~~~v~~~~e 234 (265)
+-.|+.+++.+++.+|+ +++++++|||+.||++|++.+|+. +.+.++. . +..|++++++..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~-va~gna~~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKHKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCCTTEEEESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE-EEeCCCCccccchhceEEeccccc
Confidence 57889999999999998 999999999999999999999986 5555543 2 3357777666543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.04 E-value=1.4e-10 Score=96.69 Aligned_cols=72 Identities=15% Similarity=0.115 Sum_probs=43.2
Q ss_pred CCCCHHHHHHHHHHcC-CCCCc--EEEEcCChhcHHHHHHcCceEEEECCCC---C--CC--CCC-ceecCHhH--HHHH
Q 024578 172 CKPSLEAIETAIRIAN-VDPKK--TIFFDDSARNIASAKAAGLHTVIVGSSV---P--VP--PAD-HALNSIHN--IKEA 238 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg-~~~~~--~i~vGD~~~Di~~a~~aG~~~i~~~~~~---~--~~--~a~-~~v~~~~e--l~~~ 238 (265)
+.+|+.+++.+++.+| +++++ +++|||+.||+.|++.+|+. +.+.++. . +. .|+ +++.+..+ +.+.
T Consensus 187 ~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~-va~~n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~~ 265 (275)
T 1xvi_A 187 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYA-VIVKGLNREGVHLHDEDPARVWRTQREGPEGWREG 265 (275)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEE-EECCCCC----------------------------
T ss_pred CCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCce-EEecCCCccchhhccccCCceeEccCCCchHHHHH
Confidence 5788999999999999 99999 99999999999999999985 6776654 2 21 367 77765543 7777
Q ss_pred HHHHhc
Q 024578 239 IPEIWE 244 (265)
Q Consensus 239 l~~~~~ 244 (265)
|++++.
T Consensus 266 l~~~l~ 271 (275)
T 1xvi_A 266 LDHFFS 271 (275)
T ss_dssp ------
T ss_pred HHHHHH
Confidence 776653
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.97 E-value=3.2e-09 Score=89.42 Aligned_cols=108 Identities=13% Similarity=0.053 Sum_probs=66.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
...++.||+.++++.| +.+++++|++....++..++.+|+......+++....... +........+....
T Consensus 138 ~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~-------~~~~~~~~~~~i~~ 210 (297)
T 4fe3_A 138 SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE-------NGVLKGFKGELIHV 210 (297)
T ss_dssp SCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECT-------TSBEEEECSSCCCT
T ss_pred cCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcc-------cceeEeccccccch
Confidence 3567889999988777 6999999999999999999999987444445544321110 00000000011111
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKA 208 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~ 208 (265)
..|+.+..-......+.-..++++++|||.||+.|++.
T Consensus 211 ~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~ 248 (297)
T 4fe3_A 211 FNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADG 248 (297)
T ss_dssp TCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTT
T ss_pred hhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhC
Confidence 22333322223333444466889999999999999763
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.84 E-value=2.2e-10 Score=90.65 Aligned_cols=117 Identities=14% Similarity=0.069 Sum_probs=90.1
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+.+.||+.++|+.+. ++++|+|++....++.+++.++...+|+.+++.++.... |
T Consensus 67 v~~RPgv~efL~~l~~~~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~~-----------------------k 123 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFH-----------------------R 123 (195)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEEE-----------------------T
T ss_pred EEeCcCHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccceec-----------------------C
Confidence 467899999999884 899999999999999999999999999999988765431 3
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHhcC
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
..+.+.++.+|.++++|++|||+..++.++.++|+.+..... ...| ..+.+|..+|+.+...
T Consensus 124 ---~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~~~~~----~~~D---~eL~~L~~~L~~l~~~ 185 (195)
T 2hhl_A 124 ---GNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQSWFD----DMTD---TELLDLIPFFEGLSRE 185 (195)
T ss_dssp ---TEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECCCCSS----CTTC---CHHHHHHHHHHHHHC-
T ss_pred ---CceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEeeecC----CCCh---HHHHHHHHHHHHHHhC
Confidence 345567888999999999999999999999999986533322 1122 2344566666665543
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=98.76 E-value=5.2e-10 Score=87.45 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=88.6
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+.+.||+.++|+.+. +.++|+|++....+..+++.++...+|+.+++.++.... |
T Consensus 54 v~~rPg~~efL~~l~~~~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~~-----------------------k 110 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-----------------------R 110 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEEE-----------------------T
T ss_pred EEeCCCHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCceec-----------------------C
Confidence 567899999999884 899999999999999999999999999999988765321 2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
..+.+.++.+|.++++|++|||+..++.++.++|+.. ..+.. ...| ..+.+|..+|+.+.
T Consensus 111 ---~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i--~~~~~--~~~D---~eL~~l~~~L~~l~ 170 (181)
T 2ght_A 111 ---GNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV--ASWFD--NMSD---TELHDLLPFFEQLS 170 (181)
T ss_dssp ---TEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC--CCCSS--CTTC---CHHHHHHHHHHHHT
T ss_pred ---CcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe--ccccC--CCCh---HHHHHHHHHHHHhC
Confidence 2345567888999999999999999999999999874 33321 1122 33455666665554
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.65 E-value=4.4e-08 Score=85.37 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=68.3
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc--cceeeecCCCCCCCCCCCCCCCcccCcCCc-Ccc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSS-NQR 169 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 169 (265)
++++|++.++++.| |++++|||++....++.+.+.+|+... -+.|+++..... -|+...+.... .+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~-------~dG~~tg~~~~~~p~ 292 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKD-------DEGKILPKFDKDFPI 292 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEEC-------TTCCEEEEECTTSCC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEe-------cCCceeeeecCccce
Confidence 34789999998877 699999999999999999999886432 255666542100 00111111100 011
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
+.+..|...++.+++. ......++++|||.+|+.|.+..
T Consensus 293 ~~~~gK~~~i~~~~~~-~~~~~~i~a~GDs~~D~~ML~~~ 331 (385)
T 4gxt_A 293 SIREGKVQTINKLIKN-DRNYGPIMVGGDSDGDFAMLKEF 331 (385)
T ss_dssp CSTHHHHHHHHHHTCC-TTEECCSEEEECSGGGHHHHHHC
T ss_pred eCCCchHHHHHHHHHh-cCCCCcEEEEECCHhHHHHHhcC
Confidence 2234456666665543 24456699999999999999974
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.55 E-value=2.3e-07 Score=86.13 Aligned_cols=108 Identities=14% Similarity=0.183 Sum_probs=81.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...++...+.+|+...|..+. ..
T Consensus 457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~------------------------------P~ 506 (645)
T 3j08_A 457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL------------------------------PH 506 (645)
T ss_dssp CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC------------------------------TT
T ss_pred CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEeCC------------------------------HH
Confidence 4568888877666 69999999999999999999999864332211 14
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v--~~~~el~~~l~ 240 (265)
.|.+.++.+.+ . ++++||||+.||+.|.+.+|+..++- ++. .+..+|+++ +++..+.+.+.
T Consensus 507 ~K~~~v~~l~~----~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~ 571 (645)
T 3j08_A 507 QKSEEVKKLQA----K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 571 (645)
T ss_dssp CHHHHHHHHTT----T-CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSCCTTHHHHHHH
T ss_pred hHHHHHHHHhh----C-CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecCCHHHHHHHHH
Confidence 55555555543 3 88999999999999999999865554 333 367899998 77888877664
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=4.1e-07 Score=81.39 Aligned_cols=122 Identities=16% Similarity=0.097 Sum_probs=76.5
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-C-------------CccccceeeecCCCCCCCCCCCCCC-
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-G-------------LEDCFEGIICFETINPRLQPADNTD- 157 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~-------------~~~~fd~i~~~~~~~~~~~~~~~~~- 157 (265)
+...|++...|+.+ | +++++||+....+...++.+ | ..++||.|++...=...-....-|.
T Consensus 245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~~~~pfr~ 323 (555)
T 2jc9_A 245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQ 323 (555)
T ss_dssp BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGTTCCCEEE
T ss_pred cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCcccCCCcceE
Confidence 45667888887776 6 99999999999999988887 6 2367999776432110000000000
Q ss_pred CcccCcCCcCcccCC-CCCHHH-----HHHHHHHcCCCCCcEEEEcCCh-hcHHHHH-HcCceEEEECC
Q 024578 158 GIENNSFSSNQRILC-KPSLEA-----IETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVGS 218 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~-kp~~~~-----~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~-~aG~~~i~~~~ 218 (265)
+....+...-....+ ..++.. +..+++.+|+.+++++||||.. .||..++ .+||.+++|-.
T Consensus 324 Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 324 VDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp EETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred eecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 000000000000000 011112 4788899999999999999999 7999996 89999999953
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.38 E-value=8.3e-07 Score=83.49 Aligned_cols=108 Identities=14% Similarity=0.183 Sum_probs=79.8
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+..+.+.+|+...|..+. ..
T Consensus 535 ~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~~~~~~~------------------------------P~ 584 (723)
T 3j09_A 535 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL------------------------------PH 584 (723)
T ss_dssp CSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCC------------------------------TT
T ss_pred CcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcEEEccCC------------------------------HH
Confidence 4567877777666 68999999999999999999999763322111 14
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v--~~~~el~~~l~ 240 (265)
.|.+.++.+.+ . ++++||||+.||+.|.+.+|++.++- ++. .+..+|+++ +++..+.+.+.
T Consensus 585 ~K~~~v~~l~~----~-~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~~~~~i~~~i~ 649 (723)
T 3j09_A 585 QKSEEVKKLQA----K-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 649 (723)
T ss_dssp CHHHHHHHHTT----T-CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSCCTTHHHHHHH
T ss_pred HHHHHHHHHhc----C-CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 45555555443 3 88999999999999999999865544 433 367899998 77888777664
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.7e-07 Score=74.51 Aligned_cols=70 Identities=23% Similarity=0.255 Sum_probs=56.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CC-------CCCceecCHhH--HHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VP-------PADHALNSIHN--IKEAIP 240 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~-------~a~~~v~~~~e--l~~~l~ 240 (265)
+-+|+.+++.+++++|++++++++|||+.||+.|++.+|+. +.+.++.. +. .+++++.+..+ +.+.|+
T Consensus 160 ~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~-va~~na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~ 238 (244)
T 1s2o_A 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARG-VIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEE-EECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcE-EEEcCCcHHHHHHHhcccccceeecCCcchhHHHHHHH
Confidence 57899999999999999999999999999999999999985 55555433 22 37788877655 677666
Q ss_pred HH
Q 024578 241 EI 242 (265)
Q Consensus 241 ~~ 242 (265)
++
T Consensus 239 ~~ 240 (244)
T 1s2o_A 239 HF 240 (244)
T ss_dssp HT
T ss_pred Hh
Confidence 54
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.09 E-value=3.8e-06 Score=81.83 Aligned_cols=132 Identities=14% Similarity=0.105 Sum_probs=80.9
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc----ceeeecCCCCCCCCCCCCCCCcccCcCCcC--
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF----EGIICFETINPRLQPADNTDGIENNSFSSN-- 167 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f----d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 167 (265)
++.|++.+.++.| |++++++|+.....+..+.+.+|+.... +.++.+++..... .........+
T Consensus 603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~-------~~~~~~~~~~~~ 675 (995)
T 3ar4_A 603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLP-------LAEQREACRRAC 675 (995)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSC-------HHHHHHHHHHCC
T ss_pred CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCC-------HHHHHHHHhhCc
Confidence 4557888877666 6999999999999999999999986432 2233332211100 0000000000
Q ss_pred cccC--CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 168 QRIL--CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 168 ~~~~--~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
.... .+.|..+++.+.+ ..+.++++||+.||+.|.+.|+++.++ .++.. +..+|+++ +++..+.+.+.
T Consensus 676 v~~r~~P~~K~~~v~~l~~----~g~~v~~~GDG~ND~~alk~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~i~ 749 (995)
T 3ar4_A 676 CFARVEPSHKSKIVEYLQS----YDEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVE 749 (995)
T ss_dssp EEESCCSSHHHHHHHHHHT----TTCCEEEEECSGGGHHHHHHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHHH----CCCEEEEEcCCchhHHHHHHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHH
Confidence 0000 1233444444433 347899999999999999999987665 34432 55789988 45777777653
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.07 E-value=4.7e-06 Score=78.33 Aligned_cols=109 Identities=13% Similarity=0.179 Sum_probs=76.4
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
++.|++.+.++.+ |++++++|+.+...+..+.+.+|+...+..+. ..
T Consensus 554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~v~a~~~------------------------------P~ 603 (736)
T 3rfu_A 554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKKVVAEIM------------------------------PE 603 (736)
T ss_dssp CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCCEECSCC------------------------------HH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCEEEEecC------------------------------HH
Confidence 4557777777766 69999999999999999999999764221110 02
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCcee--cCHhHHHHHHH
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHAL--NSIHNIKEAIP 240 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v--~~~~el~~~l~ 240 (265)
.|.+.++.+.+ ..+.++||||+.||+.|.+.+|++.++- ++.. +..+|+++ +++..+.+.++
T Consensus 604 ~K~~~v~~l~~----~g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~~~~~~i~~ai~ 669 (736)
T 3rfu_A 604 DKSRIVSELKD----KGLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARR 669 (736)
T ss_dssp HHHHHHHHHHH----HSCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECSCCSTTHHHHHH
T ss_pred HHHHHHHHHHh----cCCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEccCCHHHHHHHHH
Confidence 23444444433 4578999999999999999999865554 4433 55688887 45666665543
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.7e-06 Score=74.65 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=60.6
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCcc-ccce-eeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLED-CFEG-IICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
.+...||+.++|+.+ .+.++|.|++...++..+++.++... +|.. +++.++.+..
T Consensus 73 ~v~~RPg~~eFL~~l~~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~~~g~~--------------------- 131 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL--------------------- 131 (372)
T ss_dssp EEEECTTHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTTTSSCS---------------------
T ss_pred EEEECcCHHHHHHHHhcCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEecCCCCc---------------------
Confidence 356789999999998 48899999999999999999999886 7874 5545432210
Q ss_pred CCCCCHHHHHHHHHHc-CCCCCcEEEEcCChhcH
Q 024578 171 LCKPSLEAIETAIRIA-NVDPKKTIFFDDSARNI 203 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~l-g~~~~~~i~vGD~~~Di 203 (265)
..| -++.+ |.+++.|++|+|+..-.
T Consensus 132 ~~K--------dL~~L~~~dl~~viiiDd~~~~~ 157 (372)
T 3ef0_A 132 AQK--------SLRRLFPCDTSMVVVIDDRGDVW 157 (372)
T ss_dssp SCC--------CGGGTCSSCCTTEEEEESCSGGG
T ss_pred cee--------cHHHhcCCCCceEEEEeCCHHHc
Confidence 013 24443 88999999999999644
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.97 E-value=7.3e-06 Score=66.53 Aligned_cols=66 Identities=20% Similarity=0.133 Sum_probs=54.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc--CceEEEECCCCCCCCCCceecC---HhHHHHHHHHHhcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA--GLHTVIVGSSVPVPPADHALNS---IHNIKEAIPEIWEG 245 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a--G~~~i~~~~~~~~~~a~~~v~~---~~el~~~l~~~~~~ 245 (265)
+-.|..+++.+++++| +++|||+.||++|.+.+ |.. +.+.+. +..|++++.+ -+.+.+.|++++..
T Consensus 158 ~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~-vam~Na--~~~A~~v~~~~~~~~gV~~~l~~~~~~ 228 (239)
T 1u02_A 158 GVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALT-IKVGEG--ETHAKFHVADYIEMRKILKFIEMLGVQ 228 (239)
T ss_dssp TCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEE-EEESSS--CCCCSEEESSHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcE-EEECCC--CCcceEEeCCCCCHHHHHHHHHHHHHh
Confidence 4678999999999998 99999999999999999 975 555554 5678999988 67788888887643
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00012 Score=62.06 Aligned_cols=47 Identities=13% Similarity=0.037 Sum_probs=36.9
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh----CCccccceeeecC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL----GLEDCFEGIICFE 144 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~----~~~~~fd~i~~~~ 144 (265)
..++|++.++++.+ |++++|||++....++.+.+.. |+. =++|+++.
T Consensus 142 ~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp--~e~ViG~~ 195 (327)
T 4as2_A 142 PRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAK--PENVIGVT 195 (327)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCC--GGGEEEEC
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCC--HHHeEeee
Confidence 35789999998887 6999999999999999998874 333 25666653
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=97.92 E-value=9.6e-05 Score=65.29 Aligned_cols=120 Identities=14% Similarity=0.086 Sum_probs=72.2
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---------CCccccceeeecCCCCC---CCCCCCCCCCcc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFETINP---RLQPADNTDGIE 160 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---------~~~~~fd~i~~~~~~~~---~~~~~~~~~~~~ 160 (265)
+...|.+...|+.+ |.+++++||.+...+...+..+ ...++||.|++...=.. ...+-...+.
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~-- 262 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNP-- 262 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECT--
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEEC--
Confidence 34467788877776 5789999999999988877753 24478999988531000 0000000000
Q ss_pred cCcCCcCcccCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHH-HcCceEEEEC
Q 024578 161 NNSFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASAK-AAGLHTVIVG 217 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~-~aG~~~i~~~ 217 (265)
.++.........+|+ .--...+.+.+|....+++||||+. .||..++ ..||++++|-
T Consensus 263 ~~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii 324 (470)
T 4g63_A 263 ENGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVV 324 (470)
T ss_dssp TTCCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEEC
T ss_pred CCCcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEh
Confidence 111111111111111 1123456677899999999999999 6976665 5799999885
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=97.76 E-value=9.6e-05 Score=72.17 Aligned_cols=137 Identities=10% Similarity=0.080 Sum_probs=79.1
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc------------------------ceeeecCCCCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF------------------------EGIICFETINPR 149 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f------------------------d~i~~~~~~~~~ 149 (265)
++.|++.+.++.+ |++++++|+.....+..+.+.+|+...- ..++.+.+....
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~ 678 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDL 678 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTC
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhC
Confidence 3457877777666 7999999999999999999999875210 111111111000
Q ss_pred CCCCCCCCCcccC--cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCC
Q 024578 150 LQPADNTDGIENN--SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPA 225 (265)
Q Consensus 150 ~~~~~~~~~~~~~--~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a 225 (265)
. +-.... ..+ ...+.....|+--..+.+.+.-..+.++++||+.||+.|.+.|+++.++-.++.. +..+
T Consensus 679 ~------~~~l~~~~~~~-~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aA 751 (1028)
T 2zxe_A 679 S------TEVLDDILHYH-TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAA 751 (1028)
T ss_dssp C------HHHHHHHHHHC-SEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHHHHHHC
T ss_pred C------HHHHHHHHhhC-CcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHHHHHhc
Confidence 0 000000 000 0012223334433333333322236799999999999999999997765434433 4568
Q ss_pred CceecC--HhHHHHHHH
Q 024578 226 DHALNS--IHNIKEAIP 240 (265)
Q Consensus 226 ~~~v~~--~~el~~~l~ 240 (265)
|+++.+ +..+.+.+.
T Consensus 752 D~Vl~~~~~~~I~~~i~ 768 (1028)
T 2zxe_A 752 DMILLDDNFASIVTGVE 768 (1028)
T ss_dssp SEEETTCCTHHHHHHHH
T ss_pred CEEecCCCHHHHHHHHH
Confidence 888754 666666553
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00023 Score=69.63 Aligned_cols=138 Identities=13% Similarity=0.094 Sum_probs=77.4
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccc------------------------eeeecCCCCCC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFE------------------------GIICFETINPR 149 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd------------------------~i~~~~~~~~~ 149 (265)
++.|++.+.++.+ |++++++|+.+...+..+.+.+|+...-. .++.+.+....
T Consensus 604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 683 (1034)
T 3ixz_A 604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683 (1034)
T ss_pred CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhC
Confidence 4557777777766 69999999999999999999998742110 01111100000
Q ss_pred CCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCc
Q 024578 150 LQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADH 227 (265)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~ 227 (265)
..-.....-..+ ....+..-.|+--..+.+.+.-..+.++++||+.||+.|.+.||++.++-.++.. +..||+
T Consensus 684 ----~~~~l~~~~~~~-~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~ 758 (1034)
T 3ixz_A 684 ----DPSELVEALRTH-PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADM 758 (1034)
T ss_pred ----CHHHHHHHHHhC-CceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCE
Confidence 000000000000 0011222233333334443333346799999999999999999997666524432 677898
Q ss_pred eecC--HhHHHHHH
Q 024578 228 ALNS--IHNIKEAI 239 (265)
Q Consensus 228 ~v~~--~~el~~~l 239 (265)
++.+ +..+...+
T Consensus 759 Vl~~~~~~gI~~ai 772 (1034)
T 3ixz_A 759 ILLDDNFASIVTGV 772 (1034)
T ss_pred EeccCCchHHHHHH
Confidence 8865 33344444
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00012 Score=54.24 Aligned_cols=36 Identities=25% Similarity=0.303 Sum_probs=24.6
Q ss_pred ChhHHHHHhcC---CCcEEEEeCCCh---hHHHHHHhHhCCc
Q 024578 99 DPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLGRLGLE 134 (265)
Q Consensus 99 ~p~~~~~l~~l---~~~~~i~s~~~~---~~~~~~l~~~~~~ 134 (265)
.|++.++|+.+ |.+++|+|+.+. ..+...++.+++.
T Consensus 26 ~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 26 IPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp CTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45666766665 689999999874 4455566666664
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00012 Score=70.37 Aligned_cols=129 Identities=16% Similarity=0.055 Sum_probs=78.0
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-c---eeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-E---GIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+.... + .++.+++. . +...-...+.+..
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~~~--------~-~~~el~~~~~~~~ 605 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGD--------M-PGSEVYDFVEAAD 605 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBCCC--------G-GGGGGGTTTTTTS
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCccc--------C-CHHHHHHHHhhCe
Confidence 4568888888777 6999999999999999999999985311 1 01111100 0 0000000011111
Q ss_pred cC--C--CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceec--CHhHHHHHH
Q 024578 170 IL--C--KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 170 ~~--~--kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~--~~~el~~~l 239 (265)
+. . .-|..+++.+.+. .+.+.|+||+.||..+.+.|+++.++ .++.. +..+|+++. ++..+.+.+
T Consensus 606 V~arv~P~~K~~iV~~Lq~~----g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai 678 (920)
T 1mhs_A 606 GFAEVFPQHKYNVVEILQQR----GYLVAMTGDGVNDAPSLKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDAL 678 (920)
T ss_dssp CEESCCSTHHHHHHHHHHTT----TCCCEECCCCGGGHHHHHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHH
T ss_pred EEEEeCHHHHHHHHHHHHhC----CCeEEEEcCCcccHHHHHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHH
Confidence 11 1 2344555444332 37899999999999999999987665 44432 456888774 455555544
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=2e-05 Score=64.74 Aligned_cols=46 Identities=9% Similarity=-0.039 Sum_probs=39.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECCC
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~~ 219 (265)
.+-.|..+++.+ +|++++++++||| +.||++|.+.+|...+.+.+.
T Consensus 194 ~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA 243 (262)
T 2fue_A 194 EGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSP 243 (262)
T ss_dssp TTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSH
T ss_pred CCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCC
Confidence 356788999888 9999999999999 999999999999755666543
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.25 E-value=1.3e-05 Score=67.69 Aligned_cols=97 Identities=18% Similarity=0.229 Sum_probs=62.5
Q ss_pred CCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccc--cceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 97 KPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDC--FEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 97 ~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~--fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
...||+.+||+.+. +.++|.|.+...++..+++.++.... |...+..+....- .. ..
T Consensus 164 ~~RP~l~eFL~~l~~~yeivIfTas~~~ya~~vld~Ld~~~~~~~~~~~~r~~~~~~-------~~------------~~ 224 (320)
T 3shq_A 164 LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMI-------SV------------HV 224 (320)
T ss_dssp HBCTTHHHHHHHHHHHEEEEEECSSCHHHHHHHHHHTTCTTCSSCCCCEEECGGGCE-------EE------------EE
T ss_pred EeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCcceeEEEEEcCCccc-------cc------------cc
Confidence 35689999999994 88999999999999999999987654 3333332211000 00 00
Q ss_pred CCCHHHHHHHHHHc-----CCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 173 KPSLEAIETAIRIA-----NVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 173 kp~~~~~~~~~~~l-----g~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
+..+..+.+-++.+ |.+++++++|+|++.-+.+....|+.
T Consensus 225 ~~~g~~~vKdLs~Lw~~~p~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 225 PERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp TTTEEEEECCHHHHHHHCTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred cCCCCEEEEEhHHhhcccCCCChhHEEEEeCChHHhccCcCceEE
Confidence 00010111234444 78899999999999888776666543
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00017 Score=58.78 Aligned_cols=55 Identities=13% Similarity=0.046 Sum_probs=41.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCC----hhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDS----ARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~----~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|+.+++.+++ +++++++|||+ .||++|.+.+|.-.+.+. +..|....+..++
T Consensus 185 gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-------------n~~~~~~~~~~~~ 243 (246)
T 3f9r_A 185 GWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-------------SYKDTIAEVEKII 243 (246)
T ss_dssp TCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-------------SHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-------------CHHHHHHHHHHHh
Confidence 4677888888887 89999999995 999999998875444443 4456666666554
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.11 E-value=0.00013 Score=69.94 Aligned_cols=132 Identities=11% Similarity=0.061 Sum_probs=76.2
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccc-c-ceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDC-F-EGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~-f-d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
++.|++.+.++.| |++++++|+.+...+..+.+.+|+... + +.++.+.+.... .-+..-. ....+..+.
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~-----~~~~~l~-~~~~~~~v~ 561 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDAN-----LASIPVE-ELIEKADGF 561 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTT-----SCCSCHH-HHHHTSCCE
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccc-----cchhHHH-HHHhhCcEE
Confidence 4458888877766 689999999999999999999998531 1 111221111000 0000000 000000111
Q ss_pred CC----CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHH
Q 024578 172 CK----PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 172 ~k----p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l 239 (265)
.. -|..+++.+.++ | +.+.|+||+.||..+.+.|+++.++- ++.. +..+|+++.+ +..+.+.+
T Consensus 562 arv~P~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai 632 (885)
T 3b8c_A 562 AGVFPEHKYEIVKKLQER-K---HIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAV 632 (885)
T ss_dssp ECCCHHHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHH
T ss_pred EEECHHHHHHHHHHHHHC-C---CeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHH
Confidence 22 234455444432 3 67999999999999999999876654 3322 5568887754 55444433
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00052 Score=49.77 Aligned_cols=17 Identities=41% Similarity=0.495 Sum_probs=14.7
Q ss_pred ccEEEEecCCCccCCcc
Q 024578 12 YECLLFDLDDTLYPLST 28 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~ 28 (265)
+|+|+||+||||+++..
T Consensus 1 ik~i~~DlDGTL~~~~~ 17 (126)
T 1xpj_A 1 MKKLIVDLDGTLTQANT 17 (126)
T ss_dssp CCEEEECSTTTTBCCCC
T ss_pred CCEEEEecCCCCCCCCC
Confidence 47999999999998654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00046 Score=55.87 Aligned_cols=45 Identities=13% Similarity=0.037 Sum_probs=36.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~~ 219 (265)
+-.|..+++.+ +|++++++++||| +.||++|.+.+|.-.+.+.+.
T Consensus 186 ~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na 234 (246)
T 2amy_A 186 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAP 234 (246)
T ss_dssp TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSH
T ss_pred CCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCC
Confidence 46778888888 8999999999999 999999999998755666553
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.00016 Score=56.97 Aligned_cols=91 Identities=11% Similarity=0.039 Sum_probs=69.6
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCc-cccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLE-DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~-~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
+...||+.++|+.+. +.++|.|++....+..+++.++.. .+|+..++.+.....
T Consensus 58 v~~RPgl~eFL~~l~~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~----------------------- 114 (204)
T 3qle_A 58 TAKRPGADYFLGYLSQYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYK----------------------- 114 (204)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEE-----------------------
T ss_pred EEeCCCHHHHHHHHHhCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEE-----------------------
Confidence 456799999999984 789999999999999999999987 478887776543221
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCce
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 212 (265)
.. .+.+.++.+|.++++|++|+|+.+-+..-...|+.
T Consensus 115 ~g---~y~KdL~~Lgrdl~~vIiIDDsp~~~~~~p~N~I~ 151 (204)
T 3qle_A 115 DG---VHIKDLSKLNRDLSKVIIIDTDPNSYKLQPENAIP 151 (204)
T ss_dssp TT---EEECCGGGSCSCGGGEEEEESCTTTTTTCGGGEEE
T ss_pred CC---eeeecHHHhCCChHHEEEEECCHHHHhhCccCceE
Confidence 00 12345667789999999999999988665555543
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.00044 Score=56.00 Aligned_cols=32 Identities=22% Similarity=0.222 Sum_probs=26.4
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEE 40 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~ 40 (265)
.|.+|+|+||+||||+++...+.....+++.+
T Consensus 3 ~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~ 34 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPRQKITKEMDDFLQK 34 (246)
T ss_dssp -CCSEEEEEESBTTTBCTTSCCCHHHHHHHHH
T ss_pred CCCceEEEEECCCCcCCCCcccCHHHHHHHHH
Confidence 45689999999999999887787777777776
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0012 Score=54.02 Aligned_cols=32 Identities=22% Similarity=0.288 Sum_probs=25.0
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEE 40 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~ 40 (265)
+.++|+|+||+||||+++...+.....+++.+
T Consensus 10 ~~~~kli~~DlDGTLl~~~~~is~~~~~al~~ 41 (262)
T 2fue_A 10 RKERVLCLFDVDGTLTPARQKIDPEVAAFLQK 41 (262)
T ss_dssp ---CEEEEEESBTTTBSTTSCCCHHHHHHHHH
T ss_pred ccCeEEEEEeCccCCCCCCCcCCHHHHHHHHH
Confidence 44689999999999999887777777777766
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=95.91 E-value=0.0023 Score=51.96 Aligned_cols=31 Identities=32% Similarity=0.295 Sum_probs=27.0
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEE 40 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~ 40 (265)
|++|+|+||+||||+++...+.....+++..
T Consensus 2 M~~kli~~DlDGTLl~~~~~i~~~~~~~l~~ 32 (246)
T 3f9r_A 2 MKRVLLLFDVDGTLTPPRLCQTDEMRALIKR 32 (246)
T ss_dssp CCSEEEEECSBTTTBSTTSCCCHHHHHHHHH
T ss_pred CCceEEEEeCcCCcCCCCCccCHHHHHHHHH
Confidence 4689999999999999888888888887776
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.74 E-value=0.07 Score=42.75 Aligned_cols=78 Identities=14% Similarity=0.143 Sum_probs=61.6
Q ss_pred EEEEeCCChhHHHHHHhHhCCcccc--ceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCC
Q 024578 113 KIIFTNADQKHAMEVLGRLGLEDCF--EGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 190 (265)
Q Consensus 113 ~~i~s~~~~~~~~~~l~~~~~~~~f--d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~ 190 (265)
-++||++..-....++-.+++...| +.|+++..+ .|...++++.+++| +.
T Consensus 179 NVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa~ki---------------------------GKesCFerI~~RFG-~k 230 (274)
T 3geb_A 179 NVLVTTTQLIPALAKVLLYGLGSVFPIENIYSATKT---------------------------GKESCFERIMQRFG-RK 230 (274)
T ss_dssp EEEEESSCHHHHHHHHHHTTCTTTSCGGGEEETTTT---------------------------CHHHHHHHHHHHHC-TT
T ss_pred EEEEecCchHHHHHHHHHhhcccceecccccchhhc---------------------------CHHHHHHHHHHHhC-CC
Confidence 4688888776666666677777766 557776643 45899999999998 55
Q ss_pred CcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 191 KKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 191 ~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
-..++|||+...=.+|+..+|.+.-+..
T Consensus 231 ~~yvvIGDG~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 231 AVYVVIGDGVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp SEEEEEESSHHHHHHHHHTTCCEEECCS
T ss_pred ceEEEECCCHHHHHHHHHcCCCeEEeec
Confidence 7888999999999999999998877654
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=95.38 E-value=0.0087 Score=48.12 Aligned_cols=29 Identities=21% Similarity=0.317 Sum_probs=20.0
Q ss_pred ccEEEEecCCCccCC-----cccHHHHHHHHHHH
Q 024578 12 YECLLFDLDDTLYPL-----STGFNLACRRNIEE 40 (265)
Q Consensus 12 ~k~iiFDlDGTLld~-----~~~~~~~~~~~~~~ 40 (265)
+|+|+||+||||++. ...+.....+++..
T Consensus 1 ikli~~DlDGTLl~~~~~~~~~~i~~~~~~al~~ 34 (239)
T 1u02_A 1 MSLIFLDYDGTLVPIIMNPEESYADAGLLSLISD 34 (239)
T ss_dssp -CEEEEECBTTTBCCCSCGGGCCCCHHHHHHHHH
T ss_pred CeEEEEecCCCCcCCCCCcccCCCCHHHHHHHHH
Confidence 579999999999973 22455556665555
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=94.98 E-value=0.011 Score=47.72 Aligned_cols=15 Identities=33% Similarity=0.237 Sum_probs=13.1
Q ss_pred cEEEEecCCCccCCc
Q 024578 13 ECLLFDLDDTLYPLS 27 (265)
Q Consensus 13 k~iiFDlDGTLld~~ 27 (265)
.+|+||+||||+++.
T Consensus 4 ~li~~DlDGTLl~~~ 18 (244)
T 1s2o_A 4 LLLISDLDNTWVGDQ 18 (244)
T ss_dssp EEEEECTBTTTBSCH
T ss_pred eEEEEeCCCCCcCCH
Confidence 389999999999865
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=92.16 E-value=0.082 Score=46.34 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=58.8
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCcc-ccce-eeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLED-CFEG-IICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~-~fd~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
+...||+.++|+.+. +.++|.|.+...++..+++.++... +|.. +++.++.+.. .
T Consensus 82 V~~RPgl~eFL~~ls~~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~sRd~cg~~---------------------~ 140 (442)
T 3ef1_A 82 IKFRPGLAQFLQKISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGSL---------------------A 140 (442)
T ss_dssp EEECTTHHHHHHHHTTTEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEECTTTSSCS---------------------S
T ss_pred EEeCCCHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhccCCccccceEEEecCCCCc---------------------e
Confidence 566799999999984 7899999999999999999998876 6877 4444432210 0
Q ss_pred CCCCHHHHHHHHHH-cCCCCCcEEEEcCChhcH
Q 024578 172 CKPSLEAIETAIRI-ANVDPKKTIFFDDSARNI 203 (265)
Q Consensus 172 ~kp~~~~~~~~~~~-lg~~~~~~i~vGD~~~Di 203 (265)
.|. +.+ +|.+.+.+++|+|+..-.
T Consensus 141 ~Kd--------L~~ll~rdl~~vvIIDd~p~~~ 165 (442)
T 3ef1_A 141 QKS--------LRRLFPCDTSMVVVIDDRGDVW 165 (442)
T ss_dssp CCC--------GGGTCSSCCTTEEEEESCSGGG
T ss_pred eee--------hHHhcCCCcceEEEEECCHHHh
Confidence 132 232 488899999999998533
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=88.93 E-value=0.15 Score=44.02 Aligned_cols=28 Identities=21% Similarity=0.414 Sum_probs=20.7
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHH
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEE 40 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~ 40 (265)
+|.|+||+|||+++....+..+ .-++..
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d~~-~ltv~~ 28 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFDVS-ALTVYE 28 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH-HHHHHH
T ss_pred CceEEEecCceeechhhhccHH-HHHHHH
Confidence 5799999999999966666655 334444
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=84.43 E-value=1.9 Score=36.65 Aligned_cols=48 Identities=21% Similarity=0.190 Sum_probs=32.7
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCCh---hHHHHHHh-HhCCccccceeeecC
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQ---KHAMEVLG-RLGLEDCFEGIICFE 144 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~---~~~~~~l~-~~~~~~~fd~i~~~~ 144 (265)
.+.|++.++++.+ +.+++++||++. ......|. .+|+.-..+.|+++.
T Consensus 29 ~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~ 83 (352)
T 3kc2_A 29 KPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSH 83 (352)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTT
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehH
Confidence 3557777776555 689999999863 33334444 688876677788765
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.62 E-value=0.42 Score=37.03 Aligned_cols=18 Identities=39% Similarity=0.628 Sum_probs=15.1
Q ss_pred CCccEEEEecCCCccCCc
Q 024578 10 ANYECLLFDLDDTLYPLS 27 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~ 27 (265)
...+++++|+||||+++.
T Consensus 26 ~~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 26 YGKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TTCCEEEECCBTTTEEEE
T ss_pred CCCeEEEEccccceEccc
Confidence 357899999999999854
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 265 | ||||
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 7e-14 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-10 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 2e-09 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 1e-08 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 2e-08 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-08 | |
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 2e-08 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 2e-07 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 4e-07 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 7e-07 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 2e-06 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 3e-06 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 5e-06 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 7e-06 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 9e-06 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 1e-05 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 3e-05 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 4e-05 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 8e-05 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 1e-04 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 7e-04 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 7e-04 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 0.003 |
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 66.8 bits (161), Expect = 7e-14
Identities = 31/248 (12%), Positives = 63/248 (25%), Gaps = 46/248 (18%)
Query: 11 NYECLLFDLDDTLYPLS----TGFNLACRRNIEEFMSQHLHIDESE-------------V 53
NY L D++ T+ P+S T F + + + Q +
Sbjct: 2 NYSTYLLDIEGTVCPISFVKETLFPYF-TNKVPQLVQQDTRDSPVSNILSQFHIDNKEQL 60
Query: 54 PRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLP---YEKLKPDPVLRNLLLSMP 110
LEL + + GY + + + + + +K +
Sbjct: 61 QAHILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSV 120
Query: 111 QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170
+ + + Q L L +G T
Sbjct: 121 KAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK---------------------- 158
Query: 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPAD-HAL 229
K ++ +R + +F D+ + +A G+ T + P D
Sbjct: 159 --KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKY 216
Query: 230 NSIHNIKE 237
N +
Sbjct: 217 QVYKNFET 224
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 57.2 bits (136), Expect = 2e-10
Identities = 37/234 (15%), Positives = 70/234 (29%), Gaps = 19/234 (8%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 71
++ +LFDLD + + A + EE ++ + + + RE
Sbjct: 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEI---GINGVDRQFNEQLKGVSREDSLQKILD 58
Query: 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 131
A + Y K+ D ++ + Q + K A
Sbjct: 59 LADKKVSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIA------- 111
Query: 132 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191
+ P L N G + + KP+ + A V P
Sbjct: 112 --------LASASKNGPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPS 163
Query: 192 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIK-EAIPEIWE 244
++I +DS I + K +G + VG + + + E + E+W
Sbjct: 164 ESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSHYTLEFLKEVWL 217
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (130), Expect = 2e-09
Identities = 33/248 (13%), Positives = 70/248 (28%), Gaps = 21/248 (8%)
Query: 10 ANYECLLFDLDDTLYPLS----TGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHG 65
A +L D++ T P++ F N++E++ H +E + L E
Sbjct: 5 AEVTVILLDIEGTTTPIAFVKDILFPYI-EENVKEYLQTHWEEEECQQDVSLLRKQAEED 63
Query: 66 TTMAGLKAV--GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQK- 122
+ G + D+ + + + + L Q +
Sbjct: 64 AHLDGAVPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGR 123
Query: 123 -------HAMEVLGRLGLEDCFEGIIC---FETINPRLQPADNTDGIENNSFSSNQRILC 172
+ + + I E + D +E + +I
Sbjct: 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGH 183
Query: 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV---GSSVPVPPADHAL 229
K E+ +F D R ++A+ A +H +V G++
Sbjct: 184 KVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYY 243
Query: 230 NSIHNIKE 237
+ I + E
Sbjct: 244 SLITSFSE 251
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.7 bits (122), Expect = 1e-08
Identities = 31/208 (14%), Positives = 54/208 (25%), Gaps = 10/208 (4%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
FDLD L A RR + L + + + E T +
Sbjct: 3 AAFDLDGVL--ALPSIAGAFRR-----SEEALALPRDFLLGAYQTEFPEGPTEQLMKGKI 55
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134
+ + N A L + G
Sbjct: 56 TFSQWVPLMDESYRKSSKACGANLPENFSISQIFSQAMAARSINRPMLQAAIALKKKGFT 115
Query: 135 DCFEGIICFETINPRLQPADNTDGIEN---NSFSSNQRILCKPSLEAIETAIRIANVDPK 191
C + + R A + S Q + KP + + P
Sbjct: 116 TCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPN 175
Query: 192 KTIFFDDSARNIASAKAAGLHTVIVGSS 219
+ +F DD N+ A+ G+ T++V ++
Sbjct: 176 EVVFLDDFGSNLKPARDMGMVTILVHNT 203
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 51.4 bits (121), Expect = 2e-08
Identities = 29/243 (11%), Positives = 65/243 (26%), Gaps = 32/243 (13%)
Query: 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGL 71
++ ++FD D L R + E I E+ + ++
Sbjct: 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEA---GYPISVEEMGERFAGMTWKNILLQVES 58
Query: 72 KAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRL 131
+A + + + E+ LS + H ++++
Sbjct: 59 EASIPLSASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTK 118
Query: 132 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191
+ + S KP + V P
Sbjct: 119 VGLKPYFAPHIY-------------------SAKDLGADRVKPKPDIFLHGAAQFGVSPD 159
Query: 192 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----------ADHALNSIHNIKEAIPE 241
+ + +DS I A+AAG+ + + P A+ ++ + ++ I
Sbjct: 160 RVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVIAA 219
Query: 242 IWE 244
+ E
Sbjct: 220 MAE 222
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 52.1 bits (124), Expect = 2e-08
Identities = 34/236 (14%), Positives = 71/236 (30%), Gaps = 27/236 (11%)
Query: 33 ACRRNIEEFMSQHLHIDESE-------VPRMCLELYREHGTTMAGLKAVGYEFDNDEF-H 84
+EEF + LH+ ++ + + E+Y+E + V + F
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKT 205
Query: 85 AFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRLGLEDCFEGII 141
+++ ++ L+P ++ LL + I T + LGL FE
Sbjct: 206 GYIYQEII---LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADF 262
Query: 142 CF---ETINPRLQPADNTDGIENNSFSSNQ-RILCKPSLEAIETAIRIANVDPKKTIFFD 197
+ + + N FS + V+
Sbjct: 263 IATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVG 322
Query: 198 DSARNIASAKAAGLHTVIV----GSSVPVPP-----ADHALNSIHNIKEAIPEIWE 244
DS ++ SA+ G + AD+ +N + ++ + + E
Sbjct: 323 DSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVLDNLLE 378
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 50.5 bits (119), Expect = 2e-08
Identities = 27/208 (12%), Positives = 58/208 (27%), Gaps = 20/208 (9%)
Query: 16 LFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVG 75
+FDL + + + + + + + + + +
Sbjct: 4 IFDLGNVIVDI----------DFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEIS 53
Query: 76 YEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLED 135
E + + L YE+ Q + + M L G
Sbjct: 54 DEAFAEALCHEMALPLSYEQF----------SHGWQAVFVALRPEVIAIMHKLREQGHRV 103
Query: 136 CFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIF 195
+ ++ + S + KP + ++ P T+F
Sbjct: 104 VVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 163
Query: 196 FDDSARNIASAKAAGLHTVIVGSSVPVP 223
FDD+A NI A G+ +++V +P
Sbjct: 164 FDDNADNIEGANQLGITSILVKDKTTIP 191
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (114), Expect = 2e-07
Identities = 32/221 (14%), Positives = 57/221 (25%), Gaps = 42/221 (19%)
Query: 15 LLFDLDDTLY---------------PLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLE 59
+FDLD L L G + + + +
Sbjct: 5 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIP 64
Query: 60 LYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNA 119
L E+ + V + F + +P +L I TN
Sbjct: 65 LMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNT 124
Query: 120 DQKHAMEVLGR----LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS 175
E G L+ F+ +I + KP
Sbjct: 125 WLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV-----------------------KPE 161
Query: 176 LEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV 216
+ + + P + +F DD N+ A+ G+ T++V
Sbjct: 162 PQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILV 202
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 47.5 bits (111), Expect = 4e-07
Identities = 20/202 (9%), Positives = 49/202 (24%), Gaps = 16/202 (7%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
++FD TL+ + + + R + ++ L +
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134
+ + L ++ + + A L
Sbjct: 65 ALAYTLGTLGLEPD----------ESFLADMAQAYNRLTPYPDAAQCLA------ELAPL 108
Query: 135 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 194
+ L + S + + + KP ++ + V P + +
Sbjct: 109 KRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVL 168
Query: 195 FFDDSARNIASAKAAGLHTVIV 216
F + ++ AK G V
Sbjct: 169 FVSSNGFDVGGAKNFGFSVARV 190
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 46.2 bits (108), Expect = 7e-07
Identities = 28/232 (12%), Positives = 59/232 (25%), Gaps = 46/232 (19%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 70
Y ++DL TL A + + + D V + T A
Sbjct: 2 KYHDYIWDLGGTLLDNYETSTAAFVETLALY---GITQDHDSVYQALKVSTPFAIETFAP 58
Query: 71 LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR 130
E + + + +E + D +
Sbjct: 59 NLENFLEKYKENEARELEHPILFEGVSDL------------------LEDISNQG----- 95
Query: 131 LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 190
+ + + +S+ KP+ E++ +
Sbjct: 96 ----GRHFLVSHRNDQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS 151
Query: 191 KKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 242
+ D +I + +AAGL T + SI N+++ + +I
Sbjct: 152 --GLVIGDRPIDIEAGQAAGLDTHLF-------------TSIVNLRQ-VLDI 187
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 45.2 bits (105), Expect = 2e-06
Identities = 26/226 (11%), Positives = 60/226 (26%), Gaps = 27/226 (11%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
++DLD TL +F + D+ +V + +
Sbjct: 4 FIWDLDGTLLDSYEAILSGIEETFAQF---SIPYDKEKVREFIFKYSVQDLLVRVAEDRN 60
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134
++ A ++ P R +L + I K
Sbjct: 61 LDVEVLNQVRAQ-SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF------- 112
Query: 135 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 194
+ + +S + KPS EA + ++ T
Sbjct: 113 --------------TILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTY 158
Query: 195 FFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIP 240
+ D ++ A+ +G+ ++ +H + ++ +I
Sbjct: 159 YIGDRTLDVEFAQNSGIQSINFLE--STYEGNHRIQALADISRIFE 202
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 44.9 bits (104), Expect = 3e-06
Identities = 40/244 (16%), Positives = 67/244 (27%), Gaps = 38/244 (15%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 70
++ + FDLD TL L+ +++ +
Sbjct: 3 QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWA 62
Query: 71 LKAVGYEFDNDEFHAFVHGKLPYEKLKPDP-------VLRNL--LLSMPQRKIIFTNADQ 121
K E DEF F Y V L L + + TN
Sbjct: 63 CKQAEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPT 122
Query: 122 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181
KH +L G++ F ++ KP
Sbjct: 123 KHVQPILTAFGIDHLFSEMLG-----------------------GQSLPEIKPHPAPFYY 159
Query: 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIV--GSSVPVP----PADHALNSIHNI 235
+ PK+ +F DS +I +A +AG V + G + +P D + +I
Sbjct: 160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219
Query: 236 KEAI 239
+
Sbjct: 220 LKIT 223
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 44.1 bits (102), Expect = 5e-06
Identities = 34/244 (13%), Positives = 74/244 (30%), Gaps = 22/244 (9%)
Query: 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEV------PRMCLELYRE 63
+ + FDLD+TL + I+ S++ + +E+E+ ++ E +
Sbjct: 4 SRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHP 63
Query: 64 HGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKH 123
+ T + ++ +E E + E+ + Q I+
Sbjct: 64 YSTCITDVRTSHWEEAIQETKGGADNRKLAEEC-----YFLWKSTRLQHMILA-----DD 113
Query: 124 AMEVLGRLGLEDCFEGIIC-FETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182
+L L E + A + ++ KP+
Sbjct: 114 VKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHC 173
Query: 183 IRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIV---GSSVPVPPADHALNSIHNIKEA 238
+ V P + D+ I AGL + VP+ + + ++ E
Sbjct: 174 CDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLE- 232
Query: 239 IPEI 242
+P +
Sbjct: 233 LPAL 236
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 43.7 bits (101), Expect = 7e-06
Identities = 29/235 (12%), Positives = 65/235 (27%), Gaps = 15/235 (6%)
Query: 14 CLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKA 73
+ FD TL + + E ++ + +L RE + AG
Sbjct: 4 AVFFDFVGTLLSVEGEAKTHLKIMEEVL--GDYPLNPKTLLDEYEKLTREAFSNYAGK-- 59
Query: 74 VGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGL 133
Y D + K + L M QR +EVL L
Sbjct: 60 -PYRPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYP----EVVEVLKSLKG 114
Query: 134 EDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPS--LEAIETAIRIANVDPK 191
+ I +T +S ++++ + +
Sbjct: 115 KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEE 174
Query: 192 KTIFFDDSARNIASAKAAGLHTVIVGSSVPVPP----ADHALNSIHNIKEAIPEI 242
D+ ++ +K G+ ++++ D ++ + + + + E+
Sbjct: 175 AVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 42.5 bits (99), Expect = 9e-06
Identities = 18/110 (16%), Positives = 32/110 (29%), Gaps = 2/110 (1%)
Query: 122 KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIET 181
EVLGRL + + + + + I + E
Sbjct: 49 PEVPEVLGRLQSLGVPVAAAS--RTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFER 106
Query: 182 AIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 231
V + +FFDD RNI G+ + + + + L +
Sbjct: 107 LHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLET 156
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 42.9 bits (99), Expect = 1e-05
Identities = 29/226 (12%), Positives = 69/226 (30%), Gaps = 25/226 (11%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
+FD+D L ++ A + + I EL G +
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELDVMASL---GVDISRRN------ELPDTLGLRI------ 50
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134
+ + +++ + R + L R ++ + + G L
Sbjct: 51 -DMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGL 109
Query: 135 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 194
+ ++ + + S+ + KP + VDP +
Sbjct: 110 ASA----SPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCV 165
Query: 195 FFDDSARNIASAKAAGLHTVIVGSSVPVPP-----ADHALNSIHNI 235
+DS + ++KAA + +++V + A+ L+S+ +
Sbjct: 166 ALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTEL 211
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 41.4 bits (95), Expect = 3e-05
Identities = 35/231 (15%), Positives = 67/231 (29%), Gaps = 31/231 (13%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG 70
Y+ L+FD+D TL + R + + ++ + + E T G
Sbjct: 2 TYQALMFDIDGTLTNSQPAYTTVMREVLATY---GKPFSPAQAQKT-FPMAAEQAMTELG 57
Query: 71 LKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGR 130
+ A ++ ++ + +L P L R I T+ + +
Sbjct: 58 IAASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRS 117
Query: 131 LGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP 190
I + KP + TA+ NV P
Sbjct: 118 YPFMMRMAVTISADDTPK-----------------------RKPDPLPLLTALEKVNVAP 154
Query: 191 KKTIFFDDSARNIASAKAAGLHTVIV----GSSVPVPPADHALNSIHNIKE 237
+ +F DS + +A+AA + + + H +I E
Sbjct: 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 41.4 bits (95), Expect = 4e-05
Identities = 24/230 (10%), Positives = 58/230 (25%), Gaps = 17/230 (7%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
+ FDL TL+ + R E F + I + +
Sbjct: 5 IAFDLYGTLFD----VHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQ 60
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134
E + L L + ++ + G
Sbjct: 61 ATEDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSP 120
Query: 135 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 194
+ ++ + + D ++ + L + +L +D +
Sbjct: 121 QSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQAL----------GLDRSAIL 170
Query: 195 FFDDSARNIASAKAAGLHTVIV--GSSVPVPPADHALNSIHNIKEAIPEI 242
F +A + A+ G T + +V + +++ + E+
Sbjct: 171 FVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRA-VVEL 219
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 8e-05
Identities = 28/234 (11%), Positives = 61/234 (26%), Gaps = 30/234 (12%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
++ D D T+ NI M + + L + + +
Sbjct: 7 IICDFDGTI---------TMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGL 57
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKI---IFTNADQKHAMEVLGRL 131
+E +FV E K R + + + +I + + +L +
Sbjct: 58 LPSSLKEEITSFVL-----EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI 112
Query: 132 GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPK 191
+D + D I + S + + I + +
Sbjct: 113 VEKDRIYCNHAS----------FDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQ 162
Query: 192 KTIFFDDSARNIASAKAAGLHTVIVGSSVPV---PPADHALNSIHNIKEAIPEI 242
I DS ++ +AK + L + I++ I +
Sbjct: 163 YIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENV 216
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 40.2 bits (92), Expect = 1e-04
Identities = 24/234 (10%), Positives = 56/234 (23%), Gaps = 18/234 (7%)
Query: 15 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAV 74
+LFD+D TL + + + E + + GL+
Sbjct: 5 VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERA 64
Query: 75 GYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLE 134
D+ + L E+ + + + + + + +
Sbjct: 65 EIADKFDKAKET-YIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGR 123
Query: 135 DCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTI 194
+ D D E + + AN P + +
Sbjct: 124 HKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTG-----------ANYSPSQIV 172
Query: 195 FFDDSARNIASAKAAGLHTVIVGS------SVPVPPADHALNSIHNIKEAIPEI 242
D+ +I A+ ++ V + + + E + I
Sbjct: 173 IIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVLASI 226
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 37.7 bits (86), Expect = 7e-04
Identities = 37/253 (14%), Positives = 72/253 (28%), Gaps = 28/253 (11%)
Query: 11 NYECLLFDLDDTLYPLSTGFNLACR--RNIEE------FMSQHLHIDESEVPRMCLEL-- 60
+Y+ L DLD T+Y R ++E F++ + V +
Sbjct: 1 DYQGYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFD 60
Query: 61 --YREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEKLKPDPVLRNLLLSMPQRKII--- 115
A L + Y + + + P ++
Sbjct: 61 IHVPASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLD 120
Query: 116 --FTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173
+ A + + L T L A + + + + K
Sbjct: 121 TELSYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGK 180
Query: 174 PSLEAIETAIRIANVDPKKTIFFDDSARN-IASAKAAGLHTVIVGSSV---------PVP 223
P +E AI V+ ++ I D+ I S G+ +++V S P P
Sbjct: 181 PKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTP 240
Query: 224 PADHALNSIHNIK 236
P + ++S+
Sbjct: 241 P-TYVVDSLDEWT 252
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 37.6 bits (86), Expect = 7e-04
Identities = 8/53 (15%), Positives = 20/53 (37%)
Query: 187 NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 239
+D ++++ D ++ + K AGL + A+ + + E
Sbjct: 143 ALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELG 195
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 35.2 bits (80), Expect = 0.003
Identities = 17/126 (13%), Positives = 44/126 (34%), Gaps = 2/126 (1%)
Query: 93 YEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQP 152
++KL +P + LL + + + + + + F+G Q
Sbjct: 26 FDKLAFEPGVIPQLLKLQKAGYKLVM--ITNQDGLGTQSFPQADFDGPHNLMMQIFTSQG 83
Query: 153 ADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLH 212
+ + +++ KP ++ +E + +D + D A +I A+ G++
Sbjct: 84 VQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGIN 143
Query: 213 TVIVGS 218
+
Sbjct: 144 GLRYDR 149
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 265 | |||
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 99.97 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.96 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.96 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.95 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.95 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.95 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.95 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.95 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.95 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.95 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.94 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.94 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.92 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.87 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.86 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.86 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.85 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.84 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.82 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.8 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.79 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.78 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.77 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.77 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.75 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.74 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.72 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.7 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.66 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.57 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.55 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.53 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.44 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.39 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.35 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.33 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.27 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.25 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.25 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.23 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 99.08 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 98.97 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.94 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.86 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 98.8 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.8 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.72 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.71 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.48 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.42 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.02 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 97.98 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 97.97 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.63 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 97.19 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 95.77 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 95.08 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 93.37 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 92.5 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 89.34 |
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=99.97 E-value=4.6e-30 Score=204.66 Aligned_cols=196 Identities=19% Similarity=0.236 Sum_probs=151.9
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhccc-HHHHHHcCCCCC-hHHHHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT-MAGLKAVGYEFD-NDEFHAFV 87 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~ 87 (265)
|++|+|+||+||||+||.+.+..++.+ +++.+|.+...... .+.++.. ...+...+.... .+.+...+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMRE-----VLATYGKPFSPAQA-----QKTFPMAAEQAMTELGIAASEFDHFQAQY 70 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHH-----HHHTTTCCCCHHHH-----HHHTTSCHHHHHHHTTCCGGGHHHHHHHH
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHH-----HHHHcCCCCCHHHH-----HHHhcchhhhhhhccccchhhHHHHHHHh
Confidence 568999999999999988777777765 67777876544322 2233333 223333333222 22333322
Q ss_pred hccc--cCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 88 HGKL--PYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 88 ~~~~--~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
.+.+ ....++++||+.++|+.+ +.+++|+||+....+...++++++..+|+.++++++.+..
T Consensus 71 ~~~~~~~~~~~~~~~g~~~~L~~l~~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-------------- 136 (207)
T d2hdoa1 71 EDVMASHYDQIELYPGITSLFEQLPSELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKR-------------- 136 (207)
T ss_dssp HHHHTTCGGGCEECTTHHHHHHHSCTTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCC--------------
T ss_pred hhhhcccccccccccchhhhhhhhcccccccccccccccccccccccccccccccccccccccccc--------------
Confidence 2211 124678899999999999 4788999999999999999999999999999999988774
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHHHH
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEA 238 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~~~ 238 (265)
||+|++++.+++++|++|++|++|||+.+|+.+|+++|+.++++.+|.. ...+++++.++.||.++
T Consensus 137 ---------KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~l 206 (207)
T d2hdoa1 137 ---------KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILEL 206 (207)
T ss_dssp ---------TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGGG
T ss_pred ---------hhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHhh
Confidence 9999999999999999999999999999999999999999999987654 45688999999988763
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.96 E-value=3e-29 Score=201.57 Aligned_cols=202 Identities=17% Similarity=0.218 Sum_probs=149.2
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHh----cccHH-HHHHcCCCCChHHH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH----GTTMA-GLKAVGYEFDNDEF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~ 83 (265)
|..+|+|+||+||||+|+.+.+..++.+ .++.+|.+............... ..... .............+
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINS-----ALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEF 75 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHH-----HHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHH
Confidence 4579999999999999987777666665 56667765444332211110000 00000 11111112222111
Q ss_pred H-------HHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCC
Q 024578 84 H-------AFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPA 153 (265)
Q Consensus 84 ~-------~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~ 153 (265)
. ....+ .......++||+.++|+.| +.+++|+||.....++..++.+|+..+|+.++++++.+..
T Consensus 76 ~~~~~~~~~~~~~-~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~---- 150 (224)
T d2hsza1 76 KYFKRQFGFYYGE-NLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEI---- 150 (224)
T ss_dssp HHHHHHHHHHHHH-HTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSC----
T ss_pred HHHHHHHHHHHHH-hhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccccccccccccc----
Confidence 1 11111 1234667899999998887 5899999999999999999999999999999999988775
Q ss_pred CCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCc
Q 024578 154 DNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADH 227 (265)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~ 227 (265)
||+|+.+..++++++++|++|++|||+.+|+.+|+++|+.++++.++.. ..++++
T Consensus 151 -------------------kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~ 211 (224)
T d2hsza1 151 -------------------KPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDW 211 (224)
T ss_dssp -------------------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSE
T ss_pred -------------------cccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCE
Confidence 9999999999999999999999999999999999999999999987654 456899
Q ss_pred eecCHhHHHHHH
Q 024578 228 ALNSIHNIKEAI 239 (265)
Q Consensus 228 ~v~~~~el~~~l 239 (265)
+++++.||.++|
T Consensus 212 ~v~~l~dL~~ii 223 (224)
T d2hsza1 212 IFDDFADILKIT 223 (224)
T ss_dssp EESSGGGGGGGT
T ss_pred EECCHHHHHHhh
Confidence 999999998875
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=7.7e-30 Score=203.50 Aligned_cols=196 Identities=16% Similarity=0.213 Sum_probs=147.9
Q ss_pred cCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHHHHHcCCC-CChH----HH
Q 024578 9 AANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYE-FDND----EF 83 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~ 83 (265)
|.++|+|+||+||||+|+...+..++.+ +++.+|++....... ....+............ ...+ .+
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTY-----TFKELGVPSPDAKTI----RGFMGPPLESSFATCLSKDQISEAVQIY 71 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHH-----HHHHHTCCCCCHHHH----HHTSSSCHHHHHHTTSCGGGHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHH-----HHHHCCCCCCCHHHH----HHhhhcchhhhccccccchhhHHHHHHH
Confidence 4578999999999999988777777765 455566654443321 22223332222111111 1111 11
Q ss_pred HHHHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCccc
Q 024578 84 HAFVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIEN 161 (265)
Q Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~ 161 (265)
...+... ......++|++.++++.+ +.+++|+||++...++..++.+|+..+|+.++++++.
T Consensus 72 ~~~~~~~-~~~~~~~~~~~~~~l~~l~~~~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~--------------- 135 (210)
T d2ah5a1 72 RSYYKAK-GIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPE--------------- 135 (210)
T ss_dssp HHHHHHT-GGGSCEECTTHHHHHHHHHTTSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSS---------------
T ss_pred HHHHHhh-hhhcccchhHHHHHHhhhhcccchhhcccccchhhhHHHHhhccccccccccccccc---------------
Confidence 2222222 124567899999999988 4788999999999999999999999999999988764
Q ss_pred CcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHH
Q 024578 162 NSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 235 (265)
Q Consensus 162 ~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el 235 (265)
+||+|..+..+++++|++|+++++|||+.+|+.+|+++|++++++.+|.. ..+|+++++++.||
T Consensus 136 ----------~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el 205 (210)
T d2ah5a1 136 ----------APHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEV 205 (210)
T ss_dssp ----------CCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHH
T ss_pred ----------ccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHH
Confidence 38889999999999999999999999999999999999999999988754 56799999999999
Q ss_pred HHHH
Q 024578 236 KEAI 239 (265)
Q Consensus 236 ~~~l 239 (265)
.++|
T Consensus 206 ~~~l 209 (210)
T d2ah5a1 206 LAYF 209 (210)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 8875
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=2.4e-28 Score=195.90 Aligned_cols=193 Identities=17% Similarity=0.167 Sum_probs=141.1
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHHH-----HHHcCC-CCChHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAG-----LKAVGY-EFDNDEFH 84 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~ 84 (265)
.+|+++||+||||+|+.+.+..++.+ +++.+|++....... ....+..... ...... ......+.
T Consensus 2 ~i~a~iFD~DGTL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (218)
T d1te2a_ 2 QILAAIFDMDGLLIDSEPLWDRAELD-----VMASLGVDISRRNEL----PDTLGLRIDMVVDLWYARQPWNGPSRQEVV 72 (218)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHH-----HHHHTTCCGGGGGGS----CCCTTCCHHHHHHHHHHHSCCSSSCHHHHH
T ss_pred cceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHHH----HHHhCCCccchhhhhhhcccccchhHHHHH
Confidence 58999999999999977766666654 556667654432111 1111111110 111111 11121222
Q ss_pred H----HHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCC
Q 024578 85 A----FVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTD 157 (265)
Q Consensus 85 ~----~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~ 157 (265)
+ ...... .....++||+.++|+.| +++++|+||++...+...++.+|+.++|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~-~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~-------- 143 (218)
T d1te2a_ 73 ERVIARAISLV-EETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYS-------- 143 (218)
T ss_dssp HHHHHHHHHHH-HHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCC--------
T ss_pred HHHHHHHHHhh-hccccccchHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccc--------
Confidence 1 111111 13456789999998877 5999999999999999999999999999999999988764
Q ss_pred CcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCH
Q 024578 158 GIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSI 232 (265)
Q Consensus 158 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~ 232 (265)
||++++|+.+++++|++|+++++|||+.+|+.+|+++|+.++++.++.. ...++++++++
T Consensus 144 ---------------Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l 208 (218)
T d1te2a_ 144 ---------------KPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSL 208 (218)
T ss_dssp ---------------TTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCG
T ss_pred ---------------hhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECCh
Confidence 9999999999999999999999999999999999999999999977543 34689999999
Q ss_pred hHHH
Q 024578 233 HNIK 236 (265)
Q Consensus 233 ~el~ 236 (265)
.||.
T Consensus 209 ~el~ 212 (218)
T d1te2a_ 209 TELT 212 (218)
T ss_dssp GGCC
T ss_pred hhCC
Confidence 9973
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=1e-27 Score=193.94 Aligned_cols=125 Identities=19% Similarity=0.316 Sum_probs=113.9
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
...++||+.++|+.+ +++++++||++...+...++.+|+.++||.++++++.+..
T Consensus 98 ~~~~~p~~~~~L~~l~~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~----------------------- 154 (230)
T d1x42a1 98 YGELYPEVVEVLKSLKGKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFF----------------------- 154 (230)
T ss_dssp HCCBCTTHHHHHHHHBTTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBC-----------------------
T ss_pred hCcccccHHHHHHHhhccCceeeeeccccccchhhhccccccccccccccccccccc-----------------------
Confidence 357899999999987 4889999999999999999999999999999999988764
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHHHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el~~~l~~~ 242 (265)
||++++|+.+++++|++|++|++|||+. +|+.+|+++|+.+++++++.. ...+++++.++.||.++|+++
T Consensus 155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~l 229 (230)
T d1x42a1 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVDEL 229 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHHHHH
T ss_pred chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHHHHc
Confidence 9999999999999999999999999996 799999999999999976543 447899999999999999875
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.95 E-value=4.2e-28 Score=194.92 Aligned_cols=201 Identities=15% Similarity=0.174 Sum_probs=149.9
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccH-----HHHHHcCCCCChHHHHHH
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTM-----AGLKAVGYEFDNDEFHAF 86 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 86 (265)
+|+|+||+||||+||...+..++.+ .++.+|++...... ... ..+... ......+.......+...
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~-----~~~~~g~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESR-----LLTEAGYPISVEEM-GER---FAGMTWKNILLQVESEASIPLSASLLDKS 72 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHH-----HHHHTTCCCCHHHH-HHH---HTTCCHHHHHHHHHHHHCCCCCTHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHH-----HHHHcCCCCCHHHH-HHH---HhhhccccccccccccccccccccchhHH
Confidence 7999999999999987766666655 56667776543221 111 112221 122334444443332222
Q ss_pred ---HhccccCCCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeec-CCCCCCCCCCCCCCCcccC
Q 024578 87 ---VHGKLPYEKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF-ETINPRLQPADNTDGIENN 162 (265)
Q Consensus 87 ---~~~~~~~~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~-~~~~~~~~~~~~~~~~~~~ 162 (265)
+.... .....++||+.++++.++.+.+|+|+.....+...++.+++..+|+.++++ ++.+..
T Consensus 73 ~~~~~~~~-~~~~~~~~g~~~~L~~l~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~------------- 138 (222)
T d2fdra1 73 EKLLDMRL-ERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGAD------------- 138 (222)
T ss_dssp HHHHHHHH-HHHCCBCTTHHHHHHHCCSCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTT-------------
T ss_pred HHHHHHHh-hhccchhhhHHHHhhhccccceeeeecchhhhhhhhcccccccccceeeccccccccc-------------
Confidence 21111 135688999999999999999999999999999999999999999986654 332211
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----------CCCCCceecCH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------VPPADHALNSI 232 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----------~~~a~~~v~~~ 232 (265)
.+||+++.|..+++++|++|++|++|||+..|+.+|+++|+.++++.++.. ..+|+++++++
T Consensus 139 --------~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l 210 (222)
T d2fdra1 139 --------RVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRM 210 (222)
T ss_dssp --------CCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCG
T ss_pred --------ccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCH
Confidence 149999999999999999999999999999999999999999999988753 23599999999
Q ss_pred hHHHHHHHHHh
Q 024578 233 HNIKEAIPEIW 243 (265)
Q Consensus 233 ~el~~~l~~~~ 243 (265)
.||..+|..+.
T Consensus 211 ~eL~~ll~~l~ 221 (222)
T d2fdra1 211 QDLPAVIAAMA 221 (222)
T ss_dssp GGHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999998875
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.95 E-value=4.8e-27 Score=191.68 Aligned_cols=212 Identities=16% Similarity=0.242 Sum_probs=148.5
Q ss_pred ccCCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHh--------cccH---------HH
Q 024578 8 TAANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREH--------GTTM---------AG 70 (265)
Q Consensus 8 ~~~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~---------~~ 70 (265)
.|..+|+|+||+||||+++......++.+.+.. +...++....... ......... .... ..
T Consensus 2 ~m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (247)
T d2gfha1 2 GLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKL-LQSKYHYKEEAEI-ICDKVQVKLSKECFHPYSTCITDVRTSHWEEA 79 (247)
T ss_dssp ECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHH-HHHTTCCCTHHHH-HHHHHHHHHHTCCCC----CHHHHHHHHHHHH
T ss_pred CCCCCcEEEEcCCCCcCcChHHHHHHHHHHHHH-hccccCcHHHHHH-HHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHH
Confidence 467899999999999999776666666655444 3333333322111 111111100 0000 01
Q ss_pred HHHcCCCCChHHHHH----HHhccccCCCCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecC
Q 024578 71 LKAVGYEFDNDEFHA----FVHGKLPYEKLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFE 144 (265)
Q Consensus 71 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~ 144 (265)
+...+.......+.+ .+... ......++||+.++|+.| +++++|+||++...+...++.+|+..+||.+++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~L~~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~ 158 (247)
T d2gfha1 80 IQETKGGADNRKLAEECYFLWKST-RLQHMILADDVKAMLTELRKEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG 158 (247)
T ss_dssp HHHHHCSSCCHHHHHHHHHHHHHH-HHHTCCCCHHHHHHHHHHHTTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG
T ss_pred HHHhccccchHHHHHHHHHHHHHh-hhccCccCccHHHHHHHhhcccceEEeecccchhhhhhhhhcccccccccccccc
Confidence 111222222222211 11111 124567899999999887 58899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEE-ECCCCC-
Q 024578 145 TINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVI-VGSSVP- 221 (265)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~-~~~~~~- 221 (265)
+.+.. ||++++|+.+++++|++|++|++|||+. +|+.+|+.+|+++++ +.....
T Consensus 159 ~~~~~-----------------------KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~ 215 (247)
T d2gfha1 159 EQKEE-----------------------KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRV 215 (247)
T ss_dssp GSSSC-----------------------TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCC
T ss_pred ccccc-----------------------hhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCC
Confidence 88764 9999999999999999999999999997 799999999998654 433221
Q ss_pred ----CCCCCceecCHhHHHHHHHHHhcC
Q 024578 222 ----VPPADHALNSIHNIKEAIPEIWEG 245 (265)
Q Consensus 222 ----~~~a~~~v~~~~el~~~l~~~~~~ 245 (265)
...+++++.++.||.++|+++-..
T Consensus 216 ~~~~~~~p~~~i~~l~eL~~ll~~i~~~ 243 (247)
T d2gfha1 216 PLTSSPMPHYMVSSVLELPALLQSIDCK 243 (247)
T ss_dssp CSSCCCCCSEEESSGGGHHHHHHHHTTC
T ss_pred cccccCCCCEEECCHHHHHHHHHHHhhh
Confidence 467899999999999999988544
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.95 E-value=5e-27 Score=192.87 Aligned_cols=204 Identities=11% Similarity=0.031 Sum_probs=144.7
Q ss_pred CccEEEEecCCCccCCcccH-HHHHHHHHHHHHHHhCCCChhhHHH----------HHHHHHHHhcccHHHHHHcCCCCC
Q 024578 11 NYECLLFDLDDTLYPLSTGF-NLACRRNIEEFMSQHLHIDESEVPR----------MCLELYREHGTTMAGLKAVGYEFD 79 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~ 79 (265)
.+|+|+||+||||+|+.... ..++.+ ..+.+|++...... ....+..............+....
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~-----~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFME-----IFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPT 75 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHH-----HHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCC
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHH-----HHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCC
Confidence 47999999999999976543 444444 44556654322110 000111111111111111222222
Q ss_pred hHH-------HHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc-ceeeecCCCCC
Q 024578 80 NDE-------FHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF-EGIICFETINP 148 (265)
Q Consensus 80 ~~~-------~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f-d~i~~~~~~~~ 148 (265)
... +.+.+...+ .....++||+.++|+.| +++++|+||.+...++..++.+++..+| |.++++++.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~ 154 (257)
T d1swva_ 76 EADIQEMYEEFEEILFAIL-PRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPA 154 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHG-GGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSC
T ss_pred HHHHHHHHHHHHHHHHHHh-hccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhcccccccccccccccc
Confidence 221 222222222 23467899999999887 5889999999999999999999999877 88889888776
Q ss_pred CCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCC-CCcEEEEcCChhcHHHHHHcCceEEEECCCCC------
Q 024578 149 RLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVD-PKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------ 221 (265)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------ 221 (265)
. ||+|++|..+++++|+. +++|++|||+.+|+.+|+++|+.++++.+|..
T Consensus 155 ~-----------------------KP~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~ 211 (257)
T d1swva_ 155 G-----------------------RPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTE 211 (257)
T ss_dssp C-----------------------TTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCH
T ss_pred c-----------------------ccChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCH
Confidence 4 99999999999999995 58999999999999999999999999988753
Q ss_pred -----------------------CCCCCceecCHhHHHHHHHHHh
Q 024578 222 -----------------------VPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 222 -----------------------~~~a~~~v~~~~el~~~l~~~~ 243 (265)
..+||++++++.||.++|..+-
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi~~l~eL~~ii~~~~ 256 (257)
T d1swva_ 212 EEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVMEHIE 256 (257)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHHHHHT
T ss_pred HHHhhCCHHHHHHHHHHHHHHHHhCCCCEEECCHHHHHHHHHHHh
Confidence 2359999999999999998763
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.95 E-value=1.1e-27 Score=190.14 Aligned_cols=192 Identities=17% Similarity=0.231 Sum_probs=140.1
Q ss_pred cEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhccc--HH-HHHHcCCCCChHHHHHHHhc
Q 024578 13 ECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTT--MA-GLKAVGYEFDNDEFHAFVHG 89 (265)
Q Consensus 13 k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~ 89 (265)
++++||+||||+|+...+..++.+ +.+.+|++...... ...+. ..+.. .. .....+ ...+.+......
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 72 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEE-----TFAQFSIPYDKEKV-REFIF-KYSVQDLLVRVAEDRN--LDVEVLNQVRAQ 72 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHH-----HHHHHTCCCCHHHH-HHHHH-HSCHHHHHHHHHHHHT--CCHHHHHHHHHH
T ss_pred EEEEEcCCCcCccCHHHHHHHHHH-----HHHHcCCCCCHHHH-HHhhc-ccccccccccccchhh--hhHHHHHHHHHH
Confidence 589999999999988777777765 45666765443221 11111 11110 01 111112 122222222211
Q ss_pred c--ccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcC
Q 024578 90 K--LPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSF 164 (265)
Q Consensus 90 ~--~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~ 164 (265)
. .......++||+.++|+.+ +++++|+||... .....++++|+..+|+.++++++.+..
T Consensus 73 ~~~~~~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~--------------- 136 (204)
T d2go7a1 73 SLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVR--------------- 136 (204)
T ss_dssp HHTTCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCC---------------
T ss_pred HHHhhcccCcccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccccccccccccc---------------
Confidence 1 1124578899999998877 589999999876 456789999999999999999888775
Q ss_pred CcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHH
Q 024578 165 SSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 239 (265)
Q Consensus 165 ~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l 239 (265)
||++++|+.+++++|++|++|++|||+.+|+.+|+++|+.++++.++. ..+++.+.++.||.+++
T Consensus 137 --------Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~--~~~~~~~~~~~dl~~l~ 201 (204)
T d2go7a1 137 --------KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLEST--YEGNHRIQALADISRIF 201 (204)
T ss_dssp --------TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCS--CTTEEECSSTTHHHHHT
T ss_pred --------chhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCC--CCcCeecCCHHHHHHHh
Confidence 999999999999999999999999999999999999999999998763 46788899999988765
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.95 E-value=2.6e-26 Score=186.73 Aligned_cols=126 Identities=17% Similarity=0.357 Sum_probs=114.5
Q ss_pred CCCCCChhHHHHHhcC-CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 94 EKLKPDPVLRNLLLSM-PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l-~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
....++|++.+.|+++ +..++++||.+...+...++.+++..+||.++++++.+..
T Consensus 90 ~~~~~~~~~~~~L~~l~~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~----------------------- 146 (245)
T d1qq5a_ 90 NRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVF----------------------- 146 (245)
T ss_dssp GSCCBCTTHHHHHHHHTTSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCC-----------------------
T ss_pred cccccchhhhHHHHHHhhhceeEEeccchHHHHHHHhhccccccccccccccccccc-----------------------
Confidence 4568899999999997 5788999999999999999999999999999999988875
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----------------------------CCC
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----------------------------VPP 224 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----------------------------~~~ 224 (265)
||+|++|..+++++|++|++|++|||+.+|+.+|+++||+++++++... ...
T Consensus 147 KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (245)
T d1qq5a_ 147 KPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEA 226 (245)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCC
T ss_pred CccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCC
Confidence 9999999999999999999999999999999999999999999975320 346
Q ss_pred CCceecCHhHHHHHHHHH
Q 024578 225 ADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 225 a~~~v~~~~el~~~l~~~ 242 (265)
+|++++++.||.++|+.+
T Consensus 227 pd~~i~~l~el~~lv~~~ 244 (245)
T d1qq5a_ 227 PDFVVPALGDLPRLVRGM 244 (245)
T ss_dssp CSEEESSGGGHHHHHHHH
T ss_pred CCEEECCHHHHHHHHHhh
Confidence 999999999999999875
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.95 E-value=2e-27 Score=191.92 Aligned_cols=208 Identities=14% Similarity=0.139 Sum_probs=147.8
Q ss_pred ccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChh-----hHHHHHHHHHHHhcccHHHHHHcCCCCChHHHHHH
Q 024578 12 YECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDES-----EVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAF 86 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (265)
.|+|+||+||||+++...+..++.+++.+........... .............+......... +....+.+...
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 80 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSNVGLERAEIADK-FDKAKETYIAL 80 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC---CCTTCCHHHHHHHHHHTTTCCHHHHHHH-HHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHHHHhcCchHHHHHHHHHHhCCChHHHHHH-HHHHHHHHHHH
Confidence 5799999999999988888887777655532111111000 01111112222222222211100 00012233333
Q ss_pred HhccccCCCCCCChhHHHHHhcC---C-CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 87 VHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 87 ~~~~~~~~~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
+.+........++||+.++|+.+ + .+++|+||+....+...++.+|+..+||.++++++...+
T Consensus 81 ~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------- 147 (228)
T d2hcfa1 81 FRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR------------- 147 (228)
T ss_dssp HHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG-------------
T ss_pred HHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccc-------------
Confidence 33333335668899999999887 3 578899999999999999999999999999999887664
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHc---CCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHh
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIA---NVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIH 233 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~l---g~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~ 233 (265)
||+|..+...+..+ +++|++|+||||+.+|+.+|+++|+.++++.+|.. ..+|+++++++.
T Consensus 148 ----------k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~ 217 (228)
T d2hcfa1 148 ----------NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFA 217 (228)
T ss_dssp ----------GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSC
T ss_pred ----------cchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHH
Confidence 89888877666665 78999999999999999999999999999987753 568999999999
Q ss_pred HHHHHHHHHh
Q 024578 234 NIKEAIPEIW 243 (265)
Q Consensus 234 el~~~l~~~~ 243 (265)
||.++|..++
T Consensus 218 el~~~l~~l~ 227 (228)
T d2hcfa1 218 ETDEVLASIL 227 (228)
T ss_dssp CHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999886
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.94 E-value=2.7e-27 Score=190.06 Aligned_cols=198 Identities=17% Similarity=0.213 Sum_probs=137.2
Q ss_pred CccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-----HHHHcCCCCChHHHHH
Q 024578 11 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-----GLKAVGYEFDNDEFHA 85 (265)
Q Consensus 11 ~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 85 (265)
|+|+|+||+||||+|+...+..++.+ +++.+|++........ ...+.... .....+.......+..
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~-----~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKA-----LAEEIGINGVDRQFNE----QLKGVSREDSLQKILDLADKKVSAEEFKE 71 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHH-----HHHHTTCCCCCHHHHT----TTTTCCHHHHHHHHHTTSSSCCCHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHH-----HHHHcCCCCChHHHHH----HHhhccchhhhhhccccccccchhhhhhh
Confidence 68999999999999976666666654 5566666543322110 00111111 1111122333333221
Q ss_pred -------HHhccc-cCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 86 -------FVHGKL-PYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 86 -------~~~~~~-~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
.+.+.. ......++||+.++|+.+ +.+++++||.. .....++..++..+|+.++++++.+..
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~~i~~~~~~~~~----- 144 (221)
T d1o08a_ 72 LAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFDAIADPAEVAAS----- 144 (221)
T ss_dssp HHHHHHHHHHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCSEECCTTTSSSC-----
T ss_pred HHHHHHhhccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhcccccccccccccccccc-----
Confidence 111111 123567899999999887 47888888864 467899999999999999999887764
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhH
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHN 234 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~e 234 (265)
||++++|+.+++++|++|++|++|||+.+|+.+|+++|+++++++++.....++.+++++.+
T Consensus 145 ------------------KP~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 206 (221)
T d1o08a_ 145 ------------------KPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPEDLGDDIVIVPDTSH 206 (221)
T ss_dssp ------------------TTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHHHHCSSSEEESSGGG
T ss_pred ------------------ccChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECChhhcccccEEcCCccc
Confidence 99999999999999999999999999999999999999999999886554455556666655
Q ss_pred H-HHHHHHH
Q 024578 235 I-KEAIPEI 242 (265)
Q Consensus 235 l-~~~l~~~ 242 (265)
+ .+.|.++
T Consensus 207 ~~~~~l~el 215 (221)
T d1o08a_ 207 YTLEFLKEV 215 (221)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 3 3444444
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.94 E-value=1.2e-25 Score=179.99 Aligned_cols=121 Identities=19% Similarity=0.294 Sum_probs=108.5
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
...++|++.++++.+ +.+++++||+.....+..++..++..+||.++++++.+..
T Consensus 91 ~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~---------------------- 148 (220)
T d1zrna_ 91 RLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVY---------------------- 148 (220)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCC----------------------
T ss_pred cccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeecc----------------------
Confidence 456788888887776 5889999999999999999999999999999999988775
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC-----CCCCCceecCHhHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP-----VPPADHALNSIHNIKEA 238 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~-----~~~a~~~v~~~~el~~~ 238 (265)
||.|+.|+.+++++|++|++|+||||+..|+.+|+++|+.++++.++.. ...||++++++.+|.++
T Consensus 149 -KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~l 219 (220)
T d1zrna_ 149 -KPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVEL 219 (220)
T ss_dssp -TTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTT
T ss_pred -ccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHhh
Confidence 9999999999999999999999999999999999999999999976543 45689999999999864
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.92 E-value=4.2e-25 Score=173.04 Aligned_cols=172 Identities=16% Similarity=0.178 Sum_probs=124.8
Q ss_pred CCccEEEEecCCCccCCcccHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHhcccHH-HHHHcCCC--CChHHHHHH
Q 024578 10 ANYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMA-GLKAVGYE--FDNDEFHAF 86 (265)
Q Consensus 10 ~~~k~iiFDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~ 86 (265)
|.+|+|+||+||||+|+...+..++.+ +.+.+|++...... ....+.... .+...... ...+.+.+.
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~-----~~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVE-----TLALYGITQDHDSV-----YQALKVSTPFAIETFAPNLENFLEKYKEN 70 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHH-----HHHHTTCCCCHHHH-----HHHHHHCHHHHHHHHCTTCTTHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHH-----HHHHcCCCccHHHH-----HhhhhccchhhhhhhhHHHHHHHHHHHHH
Confidence 569999999999999977766666654 56677876543221 111121111 12222111 112223222
Q ss_pred HhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCc
Q 024578 87 VHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNS 163 (265)
Q Consensus 87 ~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~ 163 (265)
.... .....++||+.++|+.+ +.+++|+||.+.... ..++++++..+|+.++++++....
T Consensus 71 ~~~~--~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~-------------- 133 (187)
T d2fi1a1 71 EARE--LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKR-------------- 133 (187)
T ss_dssp HHHH--TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCC--------------
T ss_pred HHHH--hhcCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhcccccccccccccccccc--------------
Confidence 2221 24668899999998766 699999999877655 578999999999999999987765
Q ss_pred CCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 164 FSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 164 ~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||+|++++.+++++++ ++|++|||+.+|+.+|+++|+.++++.++
T Consensus 134 ---------KP~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 134 ---------KPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp ---------TTSCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred ---------CCCHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999986 56999999999999999999999999764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.4e-23 Score=168.83 Aligned_cols=119 Identities=13% Similarity=0.097 Sum_probs=101.3
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeec-CCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICF-ETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
....++||+.++++.+ +++++|+||++....+..++..++.++|+..... +....
T Consensus 124 ~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------------- 182 (253)
T d1zs9a1 124 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIG--------------------- 182 (253)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGC---------------------
T ss_pred cccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccccc---------------------
Confidence 4567899999999887 5999999999999999999999998888865544 33332
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC------CCCCCceecCHhHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP------VPPADHALNSIHNI 235 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~------~~~a~~~v~~~~el 235 (265)
+||++.+|..+++++|++|++|+||||+.+|+.+|+++||+++++.++.. ...++.+++|+.||
T Consensus 183 --~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 183 --HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp --CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred --cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 49999999999999999999999999999999999999999999976433 23456789999886
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.87 E-value=5e-22 Score=152.19 Aligned_cols=112 Identities=15% Similarity=0.232 Sum_probs=94.4
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChh-HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQK-HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~-~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
+.+.++||+.++|+.| |++++|+|+++.. ..+..++.+++..+|+.+....
T Consensus 43 ~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~------------------------- 97 (164)
T d1u7pa_ 43 QNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYP------------------------- 97 (164)
T ss_dssp CEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESS-------------------------
T ss_pred cccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeeccc-------------------------
Confidence 4578999999999888 5899999987664 5677788999888888876544
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
||++..+..+++++|++|++|+||||+..|+.+|+++|+.++++.+|. +.+++.+.+..+.
T Consensus 98 ---kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G~----------~~~~~~~~l~~f~ 158 (164)
T d1u7pa_ 98 ---GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGM----------SLQTLTQGLETFA 158 (164)
T ss_dssp ---SCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSCC----------CHHHHHHHHHHHH
T ss_pred ---CCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCC----------ChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999873 3455555555543
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=1.1e-22 Score=162.55 Aligned_cols=102 Identities=18% Similarity=0.210 Sum_probs=89.8
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCC----hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNAD----QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~----~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...++|++.++|..+ +.+++++|++. .......+..+++..+||.++++++++..
T Consensus 95 ~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~------------------ 156 (222)
T d1cr6a1 95 ARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMI------------------ 156 (222)
T ss_dssp TCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCC------------------
T ss_pred cCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhccCC------------------
Confidence 467899999999888 48899999753 33456667788899999999999987764
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||++++|+.++++++++|++|+||||+..|+.+|+++|+.+++|.++
T Consensus 157 -----KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~ 203 (222)
T d1cr6a1 157 -----KPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNT 203 (222)
T ss_dssp -----TTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSS
T ss_pred -----CCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999999999999999999775
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.86 E-value=1.2e-21 Score=156.44 Aligned_cols=117 Identities=13% Similarity=0.178 Sum_probs=92.5
Q ss_pred CCCCCChhHHHHHhcCCCcEEEEeCCChhHHHHH-----------HhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 94 EKLKPDPVLRNLLLSMPQRKIIFTNADQKHAMEV-----------LGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l~~~~~i~s~~~~~~~~~~-----------l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
....+++++.+.+.... ..++.++......... ++.+++..+|+.+++++....
T Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~~-------------- 158 (225)
T d2g80a1 94 IKAPVYADAIDFIKRKK-RVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSGK-------------- 158 (225)
T ss_dssp CCBCCCHHHHHHHHHCS-CEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHCC--------------
T ss_pred ccccchhhHHHHHhhHH-hhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccCC--------------
Confidence 34567899999888764 3567777665544433 345678889999998875442
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC----CCCCCceecCHhHH
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP----VPPADHALNSIHNI 235 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~----~~~a~~~v~~~~el 235 (265)
||++++|..+++++|++|++|+||||+.+|+.+|+++|++++++.+... ...+..++.+++||
T Consensus 159 ----------KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 159 ----------KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp ----------TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred ----------CCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 9999999999999999999999999999999999999999999976432 33455678888774
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=1.1e-21 Score=156.31 Aligned_cols=102 Identities=19% Similarity=0.189 Sum_probs=87.1
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhH----HHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKH----AMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSN 167 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~----~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (265)
...++|++.+++..+ +.+++++||..... ........++..+||.++++++.+..
T Consensus 97 ~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~------------------ 158 (225)
T d1zd3a1 97 ARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMV------------------ 158 (225)
T ss_dssp HCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCC------------------
T ss_pred cCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccccc------------------
Confidence 457889999998877 58999999875543 33344455677899999999987764
Q ss_pred cccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 168 QRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 168 ~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||++++|+.+++++|++|++|++|||+..|+.+|+++|+.++++.++
T Consensus 159 -----KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 159 -----KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp -----TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred -----hhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999999999999999998764
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=9.7e-22 Score=153.11 Aligned_cols=101 Identities=21% Similarity=0.405 Sum_probs=88.9
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh-CCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL-GLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~-~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
..+++++.+++..+ +.+++++||++.......+..+ ++..+|+.++++++.+..
T Consensus 83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~---------------------- 140 (197)
T d2b0ca1 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMR---------------------- 140 (197)
T ss_dssp EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCC----------------------
T ss_pred cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeeccccccc----------------------
Confidence 46778888887666 5889999998877777667765 788899999999888775
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
||++++++.+++++|++|++|++|||+.+|+.+|+++|++++++..+
T Consensus 141 -Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~ 187 (197)
T d2b0ca1 141 -KPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK 187 (197)
T ss_dssp -TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred -ccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999999999999999999999999999999999765
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=1.6e-20 Score=146.08 Aligned_cols=135 Identities=18% Similarity=0.167 Sum_probs=96.4
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChh---------------HHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQK---------------HAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~---------------~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
+.++++||+.++|+.| +++++++||.+.. .....+...+.. ++.+..+......
T Consensus 24 ~~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~cp~~p~~------ 95 (182)
T d2gmwa1 24 DNFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQG------ 95 (182)
T ss_dssp GGCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTTC------
T ss_pred HHeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc--ccceeeccccccc------
Confidence 3467889999998887 6999999997631 122222333332 4444433322110
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceE-EEECCCCC-----CCCCCcee
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHT-VIVGSSVP-----VPPADHAL 229 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~-i~~~~~~~-----~~~a~~~v 229 (265)
........+..+||+|.++..++++++++|++++||||+.+|+.+|+++|+.+ +++.++.. +..|++++
T Consensus 96 -----~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~ 170 (182)
T d2gmwa1 96 -----SVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL 170 (182)
T ss_dssp -----SSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE
T ss_pred -----ccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEE
Confidence 11122333445799999999999999999999999999999999999999965 66776654 34599999
Q ss_pred cCHhHHHHHHHH
Q 024578 230 NSIHNIKEAIPE 241 (265)
Q Consensus 230 ~~~~el~~~l~~ 241 (265)
+++.|+.++|++
T Consensus 171 ~~l~dl~~~ikk 182 (182)
T d2gmwa1 171 NSLADLPQAIKK 182 (182)
T ss_dssp SCGGGHHHHHHC
T ss_pred CCHHHHHHHhcC
Confidence 999999998863
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.80 E-value=9.2e-20 Score=144.48 Aligned_cols=124 Identities=13% Similarity=0.177 Sum_probs=88.1
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCCh---------------hHHHHHHhHhCCccccceeeecCCCCCCCCCCCCC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQ---------------KHAMEVLGRLGLEDCFEGIICFETINPRLQPADNT 156 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~---------------~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~ 156 (265)
.++++||+.++|+.| +++++|+||.+. ..+...++..|.. ++.++.+......
T Consensus 46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~------- 116 (209)
T d2o2xa1 46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAG------- 116 (209)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTC-------
T ss_pred HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceEEEecccccc-------
Confidence 357889999999888 699999998531 1223334444432 5555554422210
Q ss_pred CCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecC
Q 024578 157 DGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNS 231 (265)
Q Consensus 157 ~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~ 231 (265)
........+..+||++.++..+++++++++++|+||||+.+|+.+|++||+.++++.++.....+++.+.+
T Consensus 117 ----~~~~~~~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~~~~~~~~~ 187 (209)
T d2o2xa1 117 ----VGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRP 187 (209)
T ss_dssp ----CSTTCCSSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEE
T ss_pred ----cccccccccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCCCcccCCccccC
Confidence 11222233445699999999999999999999999999999999999999999999888764444554444
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.79 E-value=1.1e-19 Score=145.57 Aligned_cols=141 Identities=13% Similarity=0.043 Sum_probs=99.3
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
..++++||+.++++.+ +.+++++|++....++..++++++.++| ++.+..... +.....+.......
T Consensus 72 ~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~---~an~~~~~~-------~~~~~~~~~~~~~~ 141 (226)
T d2feaa1 72 EDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRI---YCNHASFDN-------DYIHIDWPHSCKGT 141 (226)
T ss_dssp HHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGE---EEEEEECSS-------SBCEEECTTCCCTT
T ss_pred hccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccce---eeeeEEEeC-------Ccceeccccccccc
Confidence 3467899999998887 5899999999999999999999876554 222110000 00001111122233
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCC---CCCCCCCceecCHhHHHHHHHHHhc
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSS---VPVPPADHALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~---~~~~~a~~~v~~~~el~~~l~~~~~ 244 (265)
.+++++.....+++.+++++++++|||||.+|+.||++||+.++..... .+...+...+.++.|+...|+++.+
T Consensus 142 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 218 (226)
T d2feaa1 142 CSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKE 218 (226)
T ss_dssp CCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEECCSSHHHHHHHHHTSHH
T ss_pred cccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecchHHHHHHcCCCeeecCCHHHHHHHHHHHHH
Confidence 4578889999999999999999999999999999999999744322211 1133455678899999888887753
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.78 E-value=3.2e-19 Score=140.50 Aligned_cols=131 Identities=16% Similarity=0.223 Sum_probs=96.2
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
....+++++.+.++.+ +..++++|+..........+..+....+......+..... ........
T Consensus 72 ~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 138 (210)
T d1j97a_ 72 KRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLT-------------GDVEGEVL 138 (210)
T ss_dssp HTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTEEE-------------EEEECSSC
T ss_pred hhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccccc-------------cccccccc
Confidence 3456778888887776 5888999999999999999988877766555544322110 01111122
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAI 239 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l 239 (265)
.+++++..+..+++.++++++++++||||.||+.|++.||+..++ ++.. +..|++++++ +.++.++|
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 139 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred ccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 257788999999999999999999999999999999999997665 3332 5679999984 45666554
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.77 E-value=2.1e-19 Score=146.60 Aligned_cols=65 Identities=26% Similarity=0.307 Sum_probs=58.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
.+||++.+++.+++++|++|++|+||||++ +||.+|+++||.+++|.+|.. ...||++++++.||
T Consensus 174 ~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~sl~eL 247 (250)
T d2c4na1 174 VGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred cccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEECCHHHh
Confidence 469999999999999999999999999997 599999999999999988743 34689999999986
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=6.5e-19 Score=140.66 Aligned_cols=131 Identities=11% Similarity=0.075 Sum_probs=91.2
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRIL 171 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (265)
...++||+.++++.+ |.+++|+|++....++.+++.+|+..+ .+++++-.. ..++...+.....++.-
T Consensus 80 ~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~~~~-------~~~G~~~g~~~~~p~~~ 150 (217)
T d1nnla_ 80 PPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKF-------YFNGEYAGFDETQPTAE 150 (217)
T ss_dssp CCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEE-------CTTSCEEEECTTSGGGS
T ss_pred ccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeeeeee-------eehhccccceeeeeeec
Confidence 457889999998887 599999999999999999999998743 344332100 01111122222222233
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---CCCCCceecCHhHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---VPPADHALNSIHNIK 236 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---~~~a~~~v~~~~el~ 236 (265)
+..|...++.+.+.+ ++++|++||||.+|+.|++.+|..+++-++... ...+++++.++.||+
T Consensus 151 ~~~K~~~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 151 SGGKGKVIKLLKEKF--HFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp TTHHHHHHHHHHHHH--CCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred cchHHHHHHHHHhcc--CccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHhc
Confidence 455677887776655 568999999999999999999986554444332 346899999998874
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.75 E-value=9.3e-19 Score=142.93 Aligned_cols=66 Identities=20% Similarity=0.291 Sum_probs=58.8
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChh-cHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSAR-NIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~-Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
.+|||.|.+++.+++++|++|++|+||||+++ ||.+|+++||++++|.+|.. ...||++++++.||
T Consensus 177 ~~gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 177 IIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp ECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred EeccCCcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 45799999999999999999999999999985 99999999999999987642 34579999999885
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=3.9e-19 Score=135.09 Aligned_cols=107 Identities=19% Similarity=0.325 Sum_probs=75.6
Q ss_pred CCCCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 94 EKLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 94 ~~~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
+.+.++||+.++|+.| +++++++||.+ .......+...++. ++.++.+......
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~~~------ 98 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLPAD------ 98 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCGGG------
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeeccccccc------
Confidence 4467889999998887 69999999965 12234455555554 3444333221110
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
.+..+||+|.++.++++++|++|++++||||+..|+.+|+++|+.+++++.+.
T Consensus 99 ------------~~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~~ 151 (161)
T d2fpwa1 99 ------------ECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRET 151 (161)
T ss_dssp ------------CCSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTTT
T ss_pred ------------cccccccccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCCC
Confidence 01124999999999999999999999999999999999999999999997653
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.72 E-value=4.8e-18 Score=139.08 Aligned_cols=70 Identities=14% Similarity=0.252 Sum_probs=63.5
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHHHHHHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNIKEAIP 240 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el~~~l~ 240 (265)
.+||++.++..+++++|++|++++||||++ +||.+|+++|+.+++|.+|.. ...||++++++.||.++|+
T Consensus 183 ~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~l~ 261 (261)
T d1vjra_ 183 AGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ 261 (261)
T ss_dssp CSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHHHC
T ss_pred cCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHHhC
Confidence 369999999999999999999999999997 699999999999999988753 4468999999999998873
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.70 E-value=1.5e-18 Score=141.62 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=58.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHHHHcCceEEEECCCCC--------CCCCCceecCHhHH
Q 024578 171 LCKPSLEAIETAIRIANVDPKKTIFFDDSA-RNIASAKAAGLHTVIVGSSVP--------VPPADHALNSIHNI 235 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a~~aG~~~i~~~~~~~--------~~~a~~~v~~~~el 235 (265)
.+||++.+++++++++|++|++|+||||+. +||.+|+++|+++++|.+|.. ...||++++++.|+
T Consensus 178 ~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~sl~e~ 251 (253)
T d1yv9a1 178 IGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEW 251 (253)
T ss_dssp CSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGC
T ss_pred ecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEECCHHHc
Confidence 469999999999999999999999999997 599999999999999977632 34579999999886
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=1.5e-16 Score=124.55 Aligned_cols=130 Identities=8% Similarity=0.018 Sum_probs=91.6
Q ss_pred CCCCChhHHHHHhcC--CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCC
Q 024578 95 KLKPDPVLRNLLLSM--PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILC 172 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l--~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (265)
.....++....+..+ +.+.+++|.+...........++....+............ ....
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------------------~~~~ 127 (206)
T d1rkua_ 67 TLKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV-------------------VGYQ 127 (206)
T ss_dssp TCCCCTTHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCE-------------------EEEE
T ss_pred hccccchHHHHHHHhhcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeeccccc-------------------cccc
Confidence 345566666665544 5788999999999888888888876554443322211110 0112
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCce-ecCHhHHHHHHHHHhc
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHA-LNSIHNIKEAIPEIWE 244 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~-v~~~~el~~~l~~~~~ 244 (265)
.+++......++.++++++++++||||.||++|++.||++.++ +.++. +..++++ ..+.+|+.+.+.+.-.
T Consensus 128 ~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (206)
T d1rkua_ 128 LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLKREFLKASS 201 (206)
T ss_dssp CCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHHHHHHHHCS
T ss_pred ccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHHHHHHHHhh
Confidence 4455566788899999999999999999999999999997776 54433 4567774 6789999988876643
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.57 E-value=1.4e-15 Score=130.89 Aligned_cols=137 Identities=20% Similarity=0.211 Sum_probs=105.9
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccce--eeecCCCCCCCCCCCCCCCcccCcCCcCccc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEG--IICFETINPRLQPADNTDGIENNSFSSNQRI 170 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~--i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (265)
++|.||+.++|+.| |++++++||.+...++..++.+|+.++|+. ++++++... ..........
T Consensus 214 i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~------------~~~~~~~~~~ 281 (380)
T d1qyia_ 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE------------AENMYPQARP 281 (380)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH------------HHHHSTTSCC
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhh------------hhhhcccccc
Confidence 34667988888877 699999999999999999999999999975 444432100 0000000111
Q ss_pred CCCCCHHHHHHHHHH--------------cCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC---------CCCCCc
Q 024578 171 LCKPSLEAIETAIRI--------------ANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP---------VPPADH 227 (265)
Q Consensus 171 ~~kp~~~~~~~~~~~--------------lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~---------~~~a~~ 227 (265)
.+||+|..+..++.. ++.++++|+||||+.||+.+|+++|+.++++.+|.. +.+||+
T Consensus 282 ~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ 361 (380)
T d1qyia_ 282 LGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADY 361 (380)
T ss_dssp CCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSE
T ss_pred ccCCChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCE
Confidence 259999999888754 457789999999999999999999999999987754 347999
Q ss_pred eecCHhHHHHHHHHHhc
Q 024578 228 ALNSIHNIKEAIPEIWE 244 (265)
Q Consensus 228 ~v~~~~el~~~l~~~~~ 244 (265)
+++++.||.++|..+++
T Consensus 362 ii~~~~el~~il~~l~~ 378 (380)
T d1qyia_ 362 VINHLGELRGVLDNLLE 378 (380)
T ss_dssp EESSGGGHHHHHSCTTT
T ss_pred EECCHHHHHHHHHHHHh
Confidence 99999999999877764
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.55 E-value=5.9e-15 Score=110.10 Aligned_cols=101 Identities=9% Similarity=-0.031 Sum_probs=69.9
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCChhH---HHHHHhHhC------CccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNADQKH---AMEVLGRLG------LEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~---~~~~l~~~~------~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
...++|++.++++.+ |.+++++||.+... +...++.++ ....++.......-.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 98 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGD--------------- 98 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTC---------------
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecccccc---------------
Confidence 357899999998887 69999999976432 223333221 112233333333222
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcCCCCCc-EEEEcCChhcHHHHHHcCceEEEECCC
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIANVDPKK-TIFFDDSARNIASAKAAGLHTVIVGSS 219 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~-~i~vGD~~~Di~~a~~aG~~~i~~~~~ 219 (265)
.+|+.......+..+..++.+ +++|||+..|+++++++|+.++.|.+|
T Consensus 99 ---------~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 99 ---------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp ---------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred ---------cCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 267777777888887666555 467899999999999999999999887
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.53 E-value=5.8e-15 Score=117.39 Aligned_cols=72 Identities=24% Similarity=0.221 Sum_probs=59.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHh--HHHHHHHHHhc
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--NIKEAIPEIWE 244 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~--el~~~l~~~~~ 244 (265)
+.+|+.+++.+++++|++++++++|||+.||+.|++.+|+. +.+.++.. +..|++++.+.. .+.+.|.+++.
T Consensus 150 ~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~-vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l~ 225 (230)
T d1wr8a_ 150 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYK-VAVAQAPKILKENADYVTKKEYGEGGAEAIYHILE 225 (230)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHTTCSEECSSCHHHHHHHHHHHHHH
T ss_pred CcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeE-EEECCCCHHHHHhCCEEECCCCcCHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999975 55555433 667999987643 47777777663
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.44 E-value=1.2e-14 Score=115.86 Aligned_cols=70 Identities=7% Similarity=0.067 Sum_probs=56.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCH--hHHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSI--HNIKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~--~el~~~l~~~ 242 (265)
+..|..+++++++++|++++++++||||.||+.|++.+|.. +.+.++.. +..|++++.+. +.+.++++++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~-vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~~ 222 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRK-ACPANATDNIKAVSDFVSDYSYGEEIGQIFKHF 222 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEE-EECTTSCHHHHHHCSEECSCCTTHHHHHHHHHT
T ss_pred ccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeE-EEECCCcHHHHHhCCEEECCCCcCHHHHHHHHh
Confidence 35779999999999999999999999999999999999974 55555443 55688888655 5677776665
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.39 E-value=5.9e-13 Score=109.27 Aligned_cols=69 Identities=17% Similarity=0.180 Sum_probs=56.6
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHH
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
-.|..+++++++++|++++++++|||+.||+.|++.+|.. +.+.++.. +..|++++.+.++ +.+.|+++
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~s-vam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKG-VAMGNAREDIKSIADAVTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEE-EECTTCCHHHHHHCSEECCCGGGTHHHHHHHHT
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeE-EEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHh
Confidence 5789999999999999999999999999999999999965 56655543 5678888887553 77777665
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.35 E-value=9.1e-14 Score=113.51 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=59.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhc
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWE 244 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~ 244 (265)
+-.|..+++.+++++|++++++++|||+.||+.|.+.+|.. +.+.++.. +..|++++.+.++ +.++|++++.
T Consensus 188 ~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~s-va~~na~~~~k~~A~~i~~~~~~~Gva~~i~~ll~ 263 (267)
T d1nf2a_ 188 NVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLR-VAMENAIEKVKEASDIVTLTNNDSGVSYVLERIST 263 (267)
T ss_dssp TCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHTTBCB
T ss_pred CCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcE-EEeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999975 55555443 6678999887766 7777777654
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=3.8e-13 Score=109.65 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHh
Q 024578 173 KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIW 243 (265)
Q Consensus 173 kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~ 243 (265)
-.|..+++.++++++++++++++|||+.||+.|.+.+|.. +.+.++.. +..|++++.+..+ +.+.|++++
T Consensus 196 ~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~-~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~~~~ 269 (271)
T d1rkqa_ 196 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVG-VAVDNAIPSVKEVANFVTKSNLEDGVAFAIEKYV 269 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEE-EECTTSCHHHHHHCSEECCCTTTTHHHHHHHHHT
T ss_pred CCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcE-EEeCCCCHHHHHhCCEEcCCCCcChHHHHHHHHh
Confidence 4678999999999999999999999999999999999965 55555433 5668888887665 888887765
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=3.7e-11 Score=97.56 Aligned_cols=74 Identities=14% Similarity=0.168 Sum_probs=61.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHHhcCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEIWEGE 246 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~~~~~ 246 (265)
+-.|..+++++++++|++++++++||||.||++|.+.+|..+ .+.++.. +..|++++.+.++ +.+.|+++++..
T Consensus 188 ~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~v-am~Na~~~lk~~A~~v~~~~~~~Gva~~i~~~l~~~ 265 (269)
T d1rlma_ 188 GLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSF-AMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNT 265 (269)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE-ECTTCCHHHHHHCSEECCCGGGTHHHHHHHHHHHTC
T ss_pred chHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEE-EeCCCCHHHHHhCCEEcCCCCccHHHHHHHHHHhcC
Confidence 356899999999999999999999999999999999999754 4555443 6678999888766 889998887653
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.25 E-value=8.8e-12 Score=99.43 Aligned_cols=68 Identities=16% Similarity=0.097 Sum_probs=52.6
Q ss_pred ccCCCCCHHHHHHHHHHcC-CCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHH
Q 024578 169 RILCKPSLEAIETAIRIAN-VDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAI 239 (265)
Q Consensus 169 ~~~~kp~~~~~~~~~~~lg-~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l 239 (265)
...+-.|..+++.++++++ ++++++++|||+.||++|.+.+|.. +.+.++.. ...-.++++.|+.+++
T Consensus 174 ~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~-va~~Na~~--~~~~~~~~i~~~~~~i 242 (243)
T d1wzca1 174 VHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV-FIVGSLKH--KKAQNVSSIIDVLEVI 242 (243)
T ss_dssp EECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE-EEESSCCC--TTCEEESCHHHHHHHH
T ss_pred hhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcE-EEeCCCCh--HHHhhhhHHHHHHHhh
Confidence 3445678999999999995 8999999999999999999999964 55555432 2333577788877765
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.25 E-value=7.6e-12 Score=102.11 Aligned_cols=73 Identities=12% Similarity=0.180 Sum_probs=58.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHh--H-HHHHHHHHhcC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIH--N-IKEAIPEIWEG 245 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~--e-l~~~l~~~~~~ 245 (265)
+..|..+++.+++.++++++++++|||+.||+.|.+.+|.. +.+.++.. +..|++++.+-. + +.++|++++..
T Consensus 205 ~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~-va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 205 GHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS-FAVANATDSAKSHAKCVLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp TCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE-EECTTCCHHHHHHSSEECSSCTTTTHHHHHHHHHHTT
T ss_pred cchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcE-EEeCCCCHHHHHhCCEEECCcCCCcHHHHHHHHHHcC
Confidence 46789999999999999999999999999999999999975 55555543 566788886432 2 78888887653
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.23 E-value=1.1e-11 Score=100.56 Aligned_cols=70 Identities=21% Similarity=0.326 Sum_probs=57.2
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecCHhH--HHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNSIHN--IKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~~~e--l~~~l~~~ 242 (265)
+-.|..+++.+++++|++++++++||||.||+.|.+.+|. ++.+.++.. +..|++++.+.++ +.+.|+++
T Consensus 184 ~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~-svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~~ 257 (260)
T d2rbka1 184 GDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAI-GVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHF 257 (260)
T ss_dssp TCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEECTTSCHHHHHHSSEECCCGGGTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCe-EEEeCCCCHHHHHhCCEEeCCCCccHHHHHHHHh
Confidence 4678999999999999999999999999999999999997 466666543 5667888887544 77776654
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.08 E-value=4e-10 Score=92.29 Aligned_cols=119 Identities=11% Similarity=0.044 Sum_probs=73.7
Q ss_pred ChHHHHHHHhccccCCCCCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCC
Q 024578 79 DNDEFHAFVHGKLPYEKLKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADN 155 (265)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~ 155 (265)
..+.+.+...+ ..+.+.||+.++++.| +.+++|+|++....++.+++++++...--.|+++...... +.
T Consensus 121 ~~~~i~~~v~~----~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~----~~ 192 (291)
T d2bdua1 121 PKAKLKEIVAD----SDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE----NG 192 (291)
T ss_dssp BGGGHHHHHHH----SCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT----TS
T ss_pred CHHHHHHHHHh----cCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC----Ce
Confidence 34555555543 3567899999999888 5999999999999999999999876322245665421110 11
Q ss_pred CCCcccCcCCcCcccCCCCCHHHHHHHHHH--cCCCCCcEEEEcCChhcHHHHHHcC
Q 024578 156 TDGIENNSFSSNQRILCKPSLEAIETAIRI--ANVDPKKTIFFDDSARNIASAKAAG 210 (265)
Q Consensus 156 ~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~--lg~~~~~~i~vGD~~~Di~~a~~aG 210 (265)
+.+...+.. .-...|.......... ..-+.++++++|||.+|+.||..+.
T Consensus 193 ~~~~~~~~~-----i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~ 244 (291)
T d2bdua1 193 VLKGFKGEL-----IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVA 244 (291)
T ss_dssp BEEEECSSC-----CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCS
T ss_pred eEeeccCCc-----cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCc
Confidence 111111111 0112223333333332 2336688999999999999998654
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.97 E-value=6.3e-10 Score=85.62 Aligned_cols=92 Identities=23% Similarity=0.272 Sum_probs=66.6
Q ss_pred CChhHHHHHhcC---CCcEEEEeCCC--------hh----HHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccC
Q 024578 98 PDPVLRNLLLSM---PQRKIIFTNAD--------QK----HAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENN 162 (265)
Q Consensus 98 ~~p~~~~~l~~l---~~~~~i~s~~~--------~~----~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~ 162 (265)
++|++.+.|+.| ++.++|+||.+ .+ ....+++.++.. +...++...-.
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~~i~~~~~~~~--------------- 113 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATHAGL--------------- 113 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--CEEEEECSSSS---------------
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--ccEEEecCccc---------------
Confidence 468888888887 68999999963 22 233455555543 33333322222
Q ss_pred cCCcCcccCCCCCHHHHHHHHHHcC----CCCCcEEEEcCCh-----------------hcHHHHHHcCceEE
Q 024578 163 SFSSNQRILCKPSLEAIETAIRIAN----VDPKKTIFFDDSA-----------------RNIASAKAAGLHTV 214 (265)
Q Consensus 163 ~~~~~~~~~~kp~~~~~~~~~~~lg----~~~~~~i~vGD~~-----------------~Di~~a~~aG~~~i 214 (265)
.+||++-++..++++++ ++.++++||||.. .|+..|.++|+.+.
T Consensus 114 --------~RKP~~GM~~~~~~~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 114 --------NRKPVSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp --------SSTTSTHHHHHHHHTSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred --------cCCCccHHHHHHHHHhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 25999999999999975 8899999999954 89999999999854
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.94 E-value=1.9e-09 Score=81.99 Aligned_cols=112 Identities=13% Similarity=0.198 Sum_probs=87.5
Q ss_pred HHHHhcCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCCCHHHHHHH
Q 024578 103 RNLLLSMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETA 182 (265)
Q Consensus 103 ~~~l~~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~ 182 (265)
...++..+..++++|+.....+....+.+++.. ++.. .++|...++.+
T Consensus 41 i~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~----~~~~----------------------------~~~K~~~l~~~ 88 (177)
T d1k1ea_ 41 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKL----FFLG----------------------------KLEKETACFDL 88 (177)
T ss_dssp HHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE----EEES----------------------------CSCHHHHHHHH
T ss_pred HHHHhhhcEEEEEecCCchhHHHHHHhhhcccc----cccc----------------------------cccHHHHHHHH
Confidence 456777889999999999999999888887643 2222 27888999999
Q ss_pred HHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC-CCCCCCceecC------HhHHHHHHHHHhcCC
Q 024578 183 IRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV-PVPPADHALNS------IHNIKEAIPEIWEGE 246 (265)
Q Consensus 183 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~-~~~~a~~~v~~------~~el~~~l~~~~~~~ 246 (265)
++++++++++++||||+.||+++.+.+|+..+..+... .+..|+++..+ +.|+.++|......+
T Consensus 89 ~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~ 159 (177)
T d1k1ea_ 89 MKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKS 159 (177)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCT
T ss_pred HHHhcCCcceeEEecCCccHHHHHhhCCeEEEcCCccHHHHHhCCEEeCCCCCCchHHHHHHHHHHHCCCh
Confidence 99999999999999999999999999997544443322 26778888877 667777766665543
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=2.9e-09 Score=83.57 Aligned_cols=46 Identities=15% Similarity=0.066 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHH---HcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 172 CKPSLEAIETAIR---IANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 172 ~kp~~~~~~~~~~---~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
+..|...++.+++ ++|++++++++|||+.||++|.+.+|. .+.|.+
T Consensus 182 ~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~-~vaV~n 230 (232)
T d1xvia_ 182 SAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDY-AVIVKG 230 (232)
T ss_dssp TCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSE-EEECCC
T ss_pred CchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCe-EEEEeC
Confidence 3567777777776 469999999999999999999999996 566654
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=98.80 E-value=1.6e-08 Score=77.89 Aligned_cols=91 Identities=16% Similarity=0.215 Sum_probs=61.6
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChh---HHHHHH-hHhCCc--cccceeeecCCCCCCCCCCCCCCCcccCcCCc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQK---HAMEVL-GRLGLE--DCFEGIICFETINPRLQPADNTDGIENNSFSS 166 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~---~~~~~l-~~~~~~--~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (265)
..|.||+.++++.+ |.+++.+||.... ....-| +.+|+. ..-+.++..+.-.
T Consensus 85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~------------------- 145 (209)
T d2b82a1 85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPG------------------- 145 (209)
T ss_dssp CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTT-------------------
T ss_pred cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCCCC-------------------
Confidence 45789999998877 6999999997543 333444 446764 2223334433211
Q ss_pred CcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECC
Q 024578 167 NQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 167 ~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~ 218 (265)
|.. -+..++++++ ++++||..+|+.+|.++|++.+-+-+
T Consensus 146 ------K~~---rr~~Ik~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 146 ------QNT---KSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp ------CCC---SHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred ------chH---HHHHHHHcCe----EEEecCCHHHHhHHHHcCCCceEeec
Confidence 211 2334466777 78999999999999999999998844
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.80 E-value=8.6e-09 Score=82.00 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=41.9
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV 220 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~ 220 (265)
+..|..+++.+++++|++++++++|||+.||+.|.+.+|. .+.+.+..
T Consensus 160 ~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~-~vav~na~ 207 (244)
T d1s2oa1 160 RSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSAR-GVIVRNAQ 207 (244)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSE-EEECTTCC
T ss_pred ccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCc-EEEeCCCC
Confidence 4567899999999999999999999999999999999995 55665543
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=3.9e-08 Score=75.68 Aligned_cols=114 Identities=17% Similarity=0.162 Sum_probs=72.3
Q ss_pred HHHhccccCCCCCCChhHHHHHhcC---C-CcEEEEeCCChh------HHHHHHhHhCCccccceeeecCCCCCCCCCCC
Q 024578 85 AFVHGKLPYEKLKPDPVLRNLLLSM---P-QRKIIFTNADQK------HAMEVLGRLGLEDCFEGIICFETINPRLQPAD 154 (265)
Q Consensus 85 ~~~~~~~~~~~~~~~p~~~~~l~~l---~-~~~~i~s~~~~~------~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~ 154 (265)
..+.....+..++|+||+.++++.| + ..+.++|..... .....|+++......+.++.+.+
T Consensus 62 ~~~~~~~ff~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~~~~~~t~~--------- 132 (195)
T d1q92a_ 62 SIWESKNFFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFLEQIVLTRD--------- 132 (195)
T ss_dssp HHHTSTTTTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGGGGEEECSC---------
T ss_pred HHhhhhhHHhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCccEEEEccc---------
Confidence 3333333457899999999998887 2 346778876432 23345555532222333333221
Q ss_pred CCCCcccCcCCcCcccCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCC----CCCceec
Q 024578 155 NTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVP----PADHALN 230 (265)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~----~a~~~v~ 230 (265)
|. .+.. -++|+|++..+..+..+|+.++.+..++++. .....+.
T Consensus 133 ------------------K~----------~~~~----d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~ 180 (195)
T d1q92a_ 133 ------------------KT----------VVSA----DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLH 180 (195)
T ss_dssp ------------------ST----------TSCC----SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEEC
T ss_pred ------------------cc----------eecC----eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeC
Confidence 31 1111 2899999999999999999999998776642 2346799
Q ss_pred CHhHHHHHH
Q 024578 231 SIHNIKEAI 239 (265)
Q Consensus 231 ~~~el~~~l 239 (265)
++.|+.+.+
T Consensus 181 ~W~e~~~~i 189 (195)
T d1q92a_ 181 SWADDWKAI 189 (195)
T ss_dssp CTTSCHHHH
T ss_pred CHHHHHHHH
Confidence 999976554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.71 E-value=1.6e-09 Score=85.63 Aligned_cols=56 Identities=11% Similarity=0.043 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcC----ChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHHh
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDD----SARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEIW 243 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD----~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~~ 243 (265)
+-.|..++++++ +++++++++||| |.||++|.+.+|...+++ .+++|..++++.++
T Consensus 183 ~vsKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v-------------~~~~~~~~~~~~l~ 242 (243)
T d2amya1 183 GWDKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-------------TAPEDTRRICELLF 242 (243)
T ss_dssp TCSGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-------------SSHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe-------------CCHHHHHHHHHHHh
Confidence 355566666653 679999999999 669999999999655544 44566666665553
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=3.8e-09 Score=83.22 Aligned_cols=44 Identities=9% Similarity=-0.044 Sum_probs=35.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCCh----hcHHHHHHcCceEEEECC
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSA----RNIASAKAAGLHTVIVGS 218 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~----~Di~~a~~aG~~~i~~~~ 218 (265)
+-.|..+++.+++ .+++++++|||+. ||++|.+.+|...+.|.+
T Consensus 183 ~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 183 GWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred hccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 5677888888774 5889999999975 999999999965666554
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.42 E-value=1.8e-06 Score=62.02 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=70.1
Q ss_pred CChhHHHHHh---cCCCcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCCC
Q 024578 98 PDPVLRNLLL---SMPQRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKP 174 (265)
Q Consensus 98 ~~p~~~~~l~---~l~~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kp 174 (265)
+.|++.+.++ .+++++.++|+........+.+.+|++. +++. -
T Consensus 22 lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~----v~~~------------------------------~ 67 (135)
T d2b8ea1 22 LKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----VIAE------------------------------V 67 (135)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE----EECS------------------------------C
T ss_pred CCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh----hccc------------------------------c
Confidence 4456655554 4579999999999999999999999753 3321 1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCC--CCCCCCceec--CHhHHHHHH
Q 024578 175 SLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSV--PVPPADHALN--SIHNIKEAI 239 (265)
Q Consensus 175 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~--~~~~a~~~v~--~~~el~~~l 239 (265)
.|+-...+++.+.-. ..+.|+||+.||..+.+.+++..++. ++. .+..+|.++. ++..|.+.+
T Consensus 68 ~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI 134 (135)
T d2b8ea1 68 LPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAI 134 (135)
T ss_dssp CHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHH
T ss_pred chhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHh
Confidence 233334555555543 67999999999999999999875544 433 2678888884 455555443
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.02 E-value=2.4e-06 Score=66.11 Aligned_cols=65 Identities=14% Similarity=0.075 Sum_probs=52.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCCCCCCCceecCHhHHHHHHHHH
Q 024578 172 CKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVPVPPADHALNSIHNIKEAIPEI 242 (265)
Q Consensus 172 ~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~~~~a~~~v~~~~el~~~l~~~ 242 (265)
+-.|..+++.+++ .+++++|||+.||+.|.+.+|.. +.+..|..+..|.+.+++.+|+.++|+.+
T Consensus 157 g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~-~av~~g~~~~~A~~~~~~~~ev~~~l~~l 221 (229)
T d1u02a_ 157 GVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDA-LTIKVGEGETHAKFHVADYIEMRKILKFI 221 (229)
T ss_dssp TCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTS-EEEEESSSCCCCSEEESSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCe-EEEEeCCCCccCeEEcCCHHHHHHHHHHH
Confidence 4567888888875 36899999999999999999864 34444555678999999999988877766
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.98 E-value=2.3e-05 Score=58.17 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=81.5
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHhCCcccc----ceeeecCCCCCCCCCCCCCCCcccCcCCcCcc
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRLGLEDCF----EGIICFETINPRLQPADNTDGIENNSFSSNQR 169 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~~~~~~f----d~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (265)
+|.|++.+.++.| ++++.++|+.+...+..+.+.+|+...- +..+.+.++... ..........+..
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 92 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDL-------PLAEQREACRRAC 92 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHS-------CHHHHHHHHHHCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchh-------hHHHHhhhhhhhh
Confidence 3456776666555 7999999999999999999999975321 111221111000 0000000011111
Q ss_pred cCCCCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCceEEEECCCCC--CCCCCceecC--HhHHHHHHH
Q 024578 170 ILCKPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGLHTVIVGSSVP--VPPADHALNS--IHNIKEAIP 240 (265)
Q Consensus 170 ~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~~~~~~~--~~~a~~~v~~--~~el~~~l~ 240 (265)
.+..-.|+--..+.+.+.-....+.|+||+.||..+.+.+.++... ..+.. +..+|+++.+ +..+.++|+
T Consensus 93 v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~-~~gt~~a~~aAdivl~~~~l~~v~~~I~ 166 (168)
T d1wpga2 93 CFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVE 166 (168)
T ss_dssp EEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHTCSEEETTCCTHHHHHHHH
T ss_pred hhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-ccccHHHHHhCCEEEccCCHHHHHHHHH
Confidence 2234445555555555554457799999999999999999986544 44432 4568887665 666666654
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=97.97 E-value=0.00011 Score=62.56 Aligned_cols=121 Identities=14% Similarity=0.072 Sum_probs=72.8
Q ss_pred CCCChhHHHHHhcC---CCcEEEEeCCChhHHHHHHhHh---------CCccccceeeecCC---CCCCCCCCCCCCCcc
Q 024578 96 LKPDPVLRNLLLSM---PQRKIIFTNADQKHAMEVLGRL---------GLEDCFEGIICFET---INPRLQPADNTDGIE 160 (265)
Q Consensus 96 ~~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~~~l~~~---------~~~~~fd~i~~~~~---~~~~~~~~~~~~~~~ 160 (265)
+...|.+...|+.+ |.+++++||.+...+...+..+ ...++||.||+.-. ......+=...+..
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~- 262 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPE- 262 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTT-
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCC-
Confidence 44467888887776 5789999999999988777753 24478999988521 00000000000100
Q ss_pred cCcCCcCcccCCCCC---HHHHHHHHHHcCCCCCcEEEEcCCh-hcHHHH-HHcCceEEEECC
Q 024578 161 NNSFSSNQRILCKPS---LEAIETAIRIANVDPKKTIFFDDSA-RNIASA-KAAGLHTVIVGS 218 (265)
Q Consensus 161 ~~~~~~~~~~~~kp~---~~~~~~~~~~lg~~~~~~i~vGD~~-~Di~~a-~~aG~~~i~~~~ 218 (265)
++...+.....+|+ .--...+.+.+|....+++||||+. .||... +..||++++|-.
T Consensus 263 -~g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 263 -NGTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp -TCCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred -CCccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 01111111111111 1124566777899989999999999 696666 568999999853
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.63 E-value=9.8e-05 Score=51.59 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=35.5
Q ss_pred CCCCChhHHHHHhcC---CCcEEEEeCCC---------------hhHHHHHHhHhCCccccceeee
Q 024578 95 KLKPDPVLRNLLLSM---PQRKIIFTNAD---------------QKHAMEVLGRLGLEDCFEGIIC 142 (265)
Q Consensus 95 ~~~~~p~~~~~l~~l---~~~~~i~s~~~---------------~~~~~~~l~~~~~~~~fd~i~~ 142 (265)
...|.+++.+.+..+ |.+++|.|+.. ...+...|+.+|+. ||.++.
T Consensus 22 ~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~ 85 (124)
T d1xpja_ 22 NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILV 85 (124)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEE
T ss_pred ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEE
Confidence 346888999988877 78999999874 24577788888985 677765
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.19 E-value=0.00053 Score=52.84 Aligned_cols=157 Identities=11% Similarity=0.075 Sum_probs=88.4
Q ss_pred hHHHHHHHhccccCCCCCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCC----CCCCCCCC
Q 024578 80 NDEFHAFVHGKLPYEKLKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFET----INPRLQPA 153 (265)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~----~~~~~~~~ 153 (265)
.+.+.++.. .++.+.||+.+.++.++ .+.+|+|.....+++.+.++.|+. +. +++.+. +..+.+.+
T Consensus 69 ~edL~~fSE-----~~~~lvpgA~~~lk~l~~~m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ee~ 140 (308)
T d1y8aa1 69 NRDVERIAE-----LSAKFVPDAEKAMATLQERWTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPEGLR 140 (308)
T ss_dssp HHHHHHHHH-----HHCCBCTTHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCHHHH
T ss_pred HHHHHHHhh-----hceeecCCHHHHHHHHHhhCCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCChHHH
Confidence 445554442 35688999999999996 889999999999999999999874 33 222210 11000000
Q ss_pred ----CCC----CCcc---------------cCcCCcCcccCC-CCCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHc
Q 024578 154 ----DNT----DGIE---------------NNSFSSNQRILC-KPSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAA 209 (265)
Q Consensus 154 ----~~~----~~~~---------------~~~~~~~~~~~~-kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~a 209 (265)
+.. +.+. .+.++.+.-.+| --|..+.+..++..++++. ++||||.+|+++.+.+
T Consensus 141 e~ll~i~~~~~d~~~eel~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~--~~VGDSITDve~Lr~~ 218 (308)
T d1y8aa1 141 EELLSIIDVIASLSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFP--VVVGDSISDYKMFEAA 218 (308)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSC--EEEECSGGGHHHHHHH
T ss_pred HHHHHHhhhccCccHHHHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCcc--eeccCccccHHHHHHH
Confidence 000 0000 112222221122 2234566777777888664 9999999999988776
Q ss_pred ----CceEEEECCCCCCCCCCceec--CHhHHHHHHHHHhcCC
Q 024578 210 ----GLHTVIVGSSVPVPPADHALN--SIHNIKEAIPEIWEGE 246 (265)
Q Consensus 210 ----G~~~i~~~~~~~~~~a~~~v~--~~~el~~~l~~~~~~~ 246 (265)
|+...+.++.+.-+.|+..+- +.--+..++.-+.+..
T Consensus 219 r~~gGlaIsFNGN~Yal~eA~VaiiS~~~~a~~~i~dlf~~~~ 261 (308)
T d1y8aa1 219 RGLGGVAIAFNGNEYALKHADVVIISPTAMSEAKVIELFMERK 261 (308)
T ss_dssp HHTTCEEEEESCCHHHHTTCSEEEECSSTHHHHHHHHHHHHHG
T ss_pred hcCCCeeEEecCccccccccceEEeccchhHHHHHHHHHhcCc
Confidence 333222233333455555444 4444555444444443
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.77 E-value=0.0079 Score=41.43 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=30.6
Q ss_pred CCChhHHHHHhcC---CCcEEEEeCCChhHHH---HHHhHhCCccccceee
Q 024578 97 KPDPVLRNLLLSM---PQRKIIFTNADQKHAM---EVLGRLGLEDCFEGII 141 (265)
Q Consensus 97 ~~~p~~~~~l~~l---~~~~~i~s~~~~~~~~---~~l~~~~~~~~fd~i~ 141 (265)
.|.|++.+.|+.+ |..+++.|+....... ..|+..++. |+.+.
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i~ 69 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAAN 69 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEES
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceehh
Confidence 4788999998887 5889999998776544 455555554 55543
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.08 E-value=0.0044 Score=46.81 Aligned_cols=27 Identities=22% Similarity=0.341 Sum_probs=19.6
Q ss_pred EEEEecCCCccCC-----cccHHHHHHHHHHH
Q 024578 14 CLLFDLDDTLYPL-----STGFNLACRRNIEE 40 (265)
Q Consensus 14 ~iiFDlDGTLld~-----~~~~~~~~~~~~~~ 40 (265)
+|+||+||||++. ...+.....+++.+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~ 33 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISD 33 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHH
T ss_pred EEEEEecCCCCCCCCChhhCCCCHHHHHHHHH
Confidence 6899999999962 33466666666665
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.37 E-value=0.0056 Score=45.37 Aligned_cols=90 Identities=16% Similarity=0.141 Sum_probs=64.5
Q ss_pred CCCChhHHHHHhcCC--CcEEEEeCCChhHHHHHHhHhCCccccceeeecCCCCCCCCCCCCCCCcccCcCCcCcccCCC
Q 024578 96 LKPDPVLRNLLLSMP--QRKIIFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCK 173 (265)
Q Consensus 96 ~~~~p~~~~~l~~l~--~~~~i~s~~~~~~~~~~l~~~~~~~~fd~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 173 (265)
+...||+.++|+.+. +.++|.|.+...++..+++.+.....|...++.+..... .
T Consensus 54 v~~RP~l~eFL~~l~~~yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~~-----------------------~ 110 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVFH-----------------------R 110 (181)
T ss_dssp EEECTTHHHHHHHHHHHSEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEEE-----------------------T
T ss_pred EecCCCHHHHHHHHHhceEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeeec-----------------------C
Confidence 456799999999994 889999999999999999999877667666655432211 0
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEcCChhcHHHHHHcCc
Q 024578 174 PSLEAIETAIRIANVDPKKTIFFDDSARNIASAKAAGL 211 (265)
Q Consensus 174 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 211 (265)
+ .+.+-++.+|-+.+.+++|+|+..-...-..-|+
T Consensus 111 ~---~~~KdL~~l~~~l~~vvivDd~~~~~~~~~~N~I 145 (181)
T d1ta0a_ 111 G---NYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAV 145 (181)
T ss_dssp T---EEECCGGGSCSCGGGEEEECSCGGGGTTCGGGBC
T ss_pred C---cccccHhhcCCCHHHeEEEcCChhhhhcCccCee
Confidence 0 0112345567788999999999986654333444
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=92.50 E-value=0.027 Score=41.35 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=15.4
Q ss_pred cCCccEEEEecCCCccCC
Q 024578 9 AANYECLLFDLDDTLYPL 26 (265)
Q Consensus 9 ~~~~k~iiFDlDGTLld~ 26 (265)
...+|+++||+||||+|.
T Consensus 2 ~~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 2 LENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGGCCEEEEECTTTTSCS
T ss_pred cccCeEEEEccCCcccCC
Confidence 356899999999999874
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=89.34 E-value=0.063 Score=44.22 Aligned_cols=22 Identities=23% Similarity=0.501 Sum_probs=18.0
Q ss_pred ccEEEEecCCCccCCcccHHHH
Q 024578 12 YECLLFDLDDTLYPLSTGFNLA 33 (265)
Q Consensus 12 ~k~iiFDlDGTLld~~~~~~~~ 33 (265)
+|.|+||+||+|++....+..+
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~s 22 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDVS 22 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEeCCcEEEcceeecchH
Confidence 5789999999999977766543
|