Citrus Sinensis ID: 024587

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVVRDSEKRHTK
Secondary Structure (PSIPRED)
cEEEEEccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccHHHHHHccccccccccEEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEccccccccccccEEcccccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccEEEHccccccHHHHHHHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLaafhcpgasplvlwgsyplvgkgdlenytfchycskpksprthhcrscgmcvldmdhhcpfigncvgaaNHRYFILFLISAVVSTIYVAIMSVTAGlhiwsplsirshapsnvvgtDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLshlnsqggdgadqkDCQNIlrffgcpysvsrylpvvrdsekrhtk
Flexible Loop (DISEMBL)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFgcpysvsrylpvvrdsekrhtk
Low Complexity Region (SEG)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVVRDSEKRHTK
Disordered region (IsUnstruct)
**FVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVV*********
Disordered Region (DISOPRED)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLW**********LENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQ*********CQNILRFFGCPYSVSRYLP***********
Disordered Region (DISEMBL)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSK********CRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVV*********
Disordered Region (DISPRO)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVVR********
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVVRDSEKRHTK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q9LIH7	345	Probable S-acyltransferas	yes	no	0.992	0.762	0.597	4e-90
Q4R7E2	377	Probable palmitoyltransfe	N/A	no	0.679	0.477	0.285	1e-17
Q969W1	377	Probable palmitoyltransfe	yes	no	0.679	0.477	0.285	2e-17
Q58CU4	377	Probable palmitoyltransfe	yes	no	0.645	0.453	0.28	3e-16
Q9ESG8	361	Probable palmitoyltransfe	yes	no	0.618	0.454	0.285	3e-16
Q86A83	446	Putative ZDHHC-type palmi	no	no	0.498	0.295	0.308	9e-16
Q5REH2	413	Palmitoyltransferase ZDHH	no	no	0.501	0.322	0.357	2e-15
Q9H6R6	413	Palmitoyltransferase ZDHH	no	no	0.501	0.322	0.357	2e-15
Q2HJ95	413	Palmitoyltransferase ZDHH	no	no	0.501	0.322	0.342	9e-15
Q555N7	358	Putative ZDHHC-type palmi	no	no	0.245	0.181	0.569	1e-14

>sp|Q9LIH7|ZDHC7_ARATH Probable S-acyltransferase At3g18620 OS=Arabidopsis thaliana GN=At3g18620 PE=2 SV=1

 Score =  331 bits (848), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 160/268 (59%), Positives = 201/268 (75%), Gaps = 5/268 (1%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M FVICGG+WA +PV+FS+S  CGIFH V    L++STLS F L AF C G    +L+G+
Sbjct: 76  MLFVICGGIWAAYPVLFSISLACGIFHSVTTATLAISTLSTFILVAFKCAGKPTNILYGT 135

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           +P VG G L NYTFC+YCSKPKSPRTHHCR+CGMCVLDMDHHCPFIGNCVGA NH+YFI 
Sbjct: 136 HPGVGNGALNNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIA 195

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVV----GTDLA-MRFVKEIIIALL 175
           FLISAV+ST Y A+M V   +HI  P+   +   S+V     G  ++ +R VK I +  +
Sbjct: 196 FLISAVISTSYAAVMCVYTLIHILPPIEKGAAYASDVAHVAHGNSISILRVVKNICLTYI 255

Query: 176 NSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKD 235
            +A+ +S R L+LVYLFV+S+SV +GLSVLLWQQL YIYEGKTYLSHL+SQG +   +K 
Sbjct: 256 ANAVFISVRSLVLVYLFVASVSVAIGLSVLLWQQLSYIYEGKTYLSHLSSQGTEEDGEKS 315

Query: 236 CQNILRFFGCPYSVSRYLPVVRDSEKRH 263
           C+N+L FFGCP+S+ R+LP +R+  KRH
Sbjct: 316 CRNLLTFFGCPHSIERHLPTIRNLRKRH 343

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -

>sp|Q4R7E2|ZDH16_MACFA Probable palmitoyltransferase ZDHHC16 OS=Macaca fascicularis GN=ZDHHC16 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 9/189 (4%)

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHRYF  
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFS 202

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           F     +  +Y +  S       ++ +        N +   +A +   +    + +    
Sbjct: 203 FCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKLQA-VANQTYHQTPPPIFSFRER 261

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQGGDGADQKDCQNI 239
           M+ + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +     +++  Q  
Sbjct: 262 MTHKSLVYLWFLCSSVALALG-ALTVWHAVL-ISRGETSIERHINKK-----ERRRLQAK 314

Query: 240 LRFFGCPYS 248
            R F  PY+
Sbjct: 315 GRVFRNPYN 323

May be involved in apoptosis regulation.

Macaca fascicularis (taxid: 9541)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q969W1|ZDH16_HUMAN Probable palmitoyltransferase ZDHHC16 OS=Homo sapiens GN=ZDHHC16 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 9/189 (4%)

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHRYF  
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFS 202

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           F     +  +Y +  S       ++ +        N +   +A +   +      +    
Sbjct: 203 FCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKLQA-VANQTYHQTPPPTFSFRER 261

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQGGDGADQKDCQNI 239
           M+ + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +     +++  Q  
Sbjct: 262 MTHKSLVYLWFLCSSVALALG-ALTVWHAVL-ISRGETSIERHINKK-----ERRRLQAK 314

Query: 240 LRFFGCPYS 248
            R F  PY+
Sbjct: 315 GRVFRNPYN 323

May be involved in apoptosis regulation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q58CU4|ZDH16_BOVIN Probable palmitoyltransferase ZDHHC16 OS=Bos taurus GN=ZDHHC16 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 4/175 (2%)

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHRYF  
Sbjct: 143 YPPQGRNDMTTVSICKKCINPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFS 202

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           F     +  +Y +  S       ++ +        N +   +A +   +      +    
Sbjct: 203 FCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKLQA-VANQTYHQTPPPTFSFRER 261

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQGGDGADQK 234
           ++ + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +       K
Sbjct: 262 VTHKSLVYLWFLCSSVALALG-ALTIWHAVL-ISRGETSIERHINKKERQRLQAK 314

May be involved in apoptosis regulation.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ESG8|ZDH16_MOUSE Probable palmitoyltransferase ZDHHC16 OS=Mus musculus GN=Zdhhc16 PE=1 SV=2

 Score = 85.5 bits (210), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 25/189 (13%)

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHRYF  
Sbjct: 143 YPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFS 202

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           F     +  +Y +  S       ++ +      P           F + I          
Sbjct: 203 FCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFS------FRERI---------- 246

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQGGDGADQKDCQNI 239
            + + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +     +++  Q  
Sbjct: 247 -THKSLVYLWFLCSSVALALG-ALTMWHAVL-ISRGETSIERHINKK-----ERRRLQAK 298

Query: 240 LRFFGCPYS 248
            R F  PY+
Sbjct: 299 GRVFRNPYN 307

May be involved in apoptosis regulation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q86A83|ZDHC2_DICDI Putative ZDHHC-type palmitoyltransferase 2 OS=Dictyostelium discoideum GN=DDB_G0274739 PE=2 SV=2

 Score = 84.3 bits (207), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 4/136 (2%)

Query: 24  GIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSY----PLVGKGDLENYTFCHYCS 79
           G  H  I++ L +  L  + L +   PG+    +  SY    P+      ++  +C+ C+
Sbjct: 208 GKIHSFISMALVIQMLCNYYLCSTTDPGSFKDTISPSYYLLHPISSTDSNDHKKWCNKCN 267

Query: 80  KPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTA 139
             K  R HHCR C  CVL MDHHC ++ NC+G  N +YF+LFL    +S IY   + +  
Sbjct: 268 HQKPERAHHCRYCNRCVLRMDHHCQWLQNCIGLFNQKYFVLFLFYTSISIIYFFTLLIKR 327

Query: 140 GLHIWSPLSIRSHAPS 155
            + + +  ++    PS
Sbjct: 328 SIELVTKYTMEKTLPS 343

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q5REH2|ZDHC6_PONAB Palmitoyltransferase ZDHHC6 OS=Pongo abelii GN=ZDHHC6 PE=3 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 24  GIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKS 83
           G  + ++ I  +V  L  +  A F  PG  PL   G  P + + D     +C  C   K+
Sbjct: 54  GSVNFIMLINWTVMILYNYFNAMFVGPGFVPL---GWKPEISQ-DTMYLQYCKVCQAYKA 109

Query: 84  PRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHI 143
           PR+HHCR C  CV+ MDHHCP+I NC G  NH  F LFL+ A +  I+ A + V   + +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFV---MTM 166

Query: 144 WSPLSIRSHAPSNVVGTDLA 163
           ++ L  R     N V  D++
Sbjct: 167 YTQLYHRLSFGWNTVKIDMS 186

Pongo abelii (taxid: 9601)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q9H6R6|ZDHC6_HUMAN Palmitoyltransferase ZDHHC6 OS=Homo sapiens GN=ZDHHC6 PE=1 SV=1

 Score = 83.2 bits (204), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 72/140 (51%), Gaps = 7/140 (5%)

Query: 24  GIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKS 83
           G  + ++ I  +V  L  +  A F  PG  PL   G  P + + D     +C  C   K+
Sbjct: 54  GSVNFIMLINWTVMILYNYFNAMFVGPGFVPL---GWKPEISQ-DTMYLQYCKVCQAYKA 109

Query: 84  PRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHI 143
           PR+HHCR C  CV+ MDHHCP+I NC G  NH  F LFL+ A +  I+ A + V   + +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFV---MTM 166

Query: 144 WSPLSIRSHAPSNVVGTDLA 163
           ++ L  R     N V  D++
Sbjct: 167 YTQLYHRLSFGWNTVKIDMS 186

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q2HJ95|ZDHC6_BOVIN Palmitoyltransferase ZDHHC6 OS=Bos taurus GN=ZDHHC6 PE=2 SV=1

 Score = 80.9 bits (198), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 7/140 (5%)

Query: 24  GIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKS 83
           G  + ++ I  +V  L  +  A F  PG  PL     +      D     +C  C   K+
Sbjct: 54  GSVNFIMLINWTVMILYNYFNAMFVGPGFVPL----GWKPENSQDSVYLQYCKVCQAYKA 109

Query: 84  PRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHI 143
           PR+HHCR C  CV+ MDHHCP+I NC G  NH  F LFL+ A +  I+ A + V   + +
Sbjct: 110 PRSHHCRKCNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFV---MTM 166

Query: 144 WSPLSIRSHAPSNVVGTDLA 163
           ++ L  R     N V  D++
Sbjct: 167 YTQLYNRLSFGWNTVKIDMS 186

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|Q555N7|ZDHC4_DICDI Putative ZDHHC-type palmitoyltransferase 4 OS=Dictyostelium discoideum GN=DDB_G0274251 PE=3 SV=1

 Score = 80.5 bits (197), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 42/65 (64%)

Query: 68  DLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVV 127
           D   +++C  CSK K PR HHC  C  CVL MDHHCP+IG CVG  N+RYF LFL    V
Sbjct: 122 DNVKWSYCKKCSKAKPPRCHHCSVCDKCVLKMDHHCPWIGGCVGFYNYRYFFLFLSYLWV 181

Query: 128 STIYV 132
           S  YV
Sbjct: 182 SVCYV 186

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
359473655	336	PREDICTED: probable S-acyltransferase At	1.0	0.788	0.701	1e-102
356530229	343	PREDICTED: probable S-acyltransferase At	1.0	0.772	0.637	2e-98
449526662	365	PREDICTED: LOW QUALITY PROTEIN: probable	0.981	0.712	0.690	2e-98
449461727	365	PREDICTED: probable S-acyltransferase At	0.981	0.712	0.690	3e-98
356576985	342	PREDICTED: probable S-acyltransferase At	1.0	0.774	0.645	1e-97
224096562	342	predicted protein [Populus trichocarpa]	0.992	0.769	0.646	7e-97
357473861	368	Palmitoyltransferase ZDHHC17 [Medicago t	0.988	0.711	0.612	4e-91
297830520	345	zinc finger family protein [Arabidopsis	0.992	0.762	0.600	3e-89
22331163	345	putative S-acyltransferase [Arabidopsis	0.992	0.762	0.597	2e-88
255580618	225	zinc finger protein, putative [Ricinus c	0.849	1.0	0.675	1e-84

>gi|359473655|ref|XP_002270371.2| PREDICTED: probable S-acyltransferase At3g18620-like [Vitis vinifera] gi|297738242|emb|CBI27443.3| unnamed protein product [Vitis vinifera]

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/265 (70%), Positives = 210/265 (79%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M FVICGGV  V+PVVFS+SYF GI H  I + LSV+TLS F LAAF C G  P + WGS
Sbjct: 72  MLFVICGGVLTVYPVVFSISYFYGIIHCTITMILSVTTLSTFSLAAFCCAGTPPNMTWGS 131

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP+VGKG LENYTFCHYCSKPKSPRTHHCRSCGMC+LDMDHHCPFIGNCVGAANHR+FI 
Sbjct: 132 YPVVGKGSLENYTFCHYCSKPKSPRTHHCRSCGMCILDMDHHCPFIGNCVGAANHRHFIA 191

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           FLISAV+ST YVAIMSV AG HIW PL+ RS    N  G D     +KEIIIA  +SA+ 
Sbjct: 192 FLISAVISTTYVAIMSVYAGFHIWPPLTYRSLGRLNGSGADSGFIAMKEIIIAFFSSAVH 251

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNIL 240
           +S RGL+LVYLFVSS+SV +GLSVLLWQQL +IYEGKTYL+ L+SQG D    +DC+N+L
Sbjct: 252 LSLRGLVLVYLFVSSVSVEIGLSVLLWQQLSFIYEGKTYLTQLSSQGDDAVGDRDCRNLL 311

Query: 241 RFFGCPYSVSRYLPVVRDSEKRHTK 265
           RFFGCPYS SRYL    +S KRH K
Sbjct: 312 RFFGCPYSASRYLTSFSNSIKRHDK 336

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356530229|ref|XP_003533685.1| PREDICTED: probable S-acyltransferase At3g18620-like [Glycine max]

 Score =  364 bits (935), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 169/265 (63%), Positives = 206/265 (77%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M FVI GGVW V+PVVFS+S  CG+FH ++   LS++T+S F  AAF C G  P +LWGS
Sbjct: 79  MFFVIFGGVWTVYPVVFSISILCGVFHSIVTAILSIATISFFSFAAFRCAGTPPNILWGS 138

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP VGK DLENYT+CHYCSKPKSPR HHCRSC  CVLDMDHHCPFIGNCVG+ANHR FI 
Sbjct: 139 YPAVGKDDLENYTYCHYCSKPKSPRAHHCRSCRKCVLDMDHHCPFIGNCVGSANHRSFIA 198

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           FLISAV+STIYV+IMS  AGL  W PL       + V  ++LA R + EI++A L SALL
Sbjct: 199 FLISAVLSTIYVSIMSAYAGLRTWPPLKYSLGHINGVSSSELAWRIINEIVVAFLRSALL 258

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNIL 240
           +SSRGL+L YLF++S+S+ +GLS+LLWQQL YIY+GKTYLSHL+SQ  +  ++KDCQN++
Sbjct: 259 LSSRGLILAYLFIASVSLQIGLSILLWQQLSYIYQGKTYLSHLSSQTDNEEEKKDCQNLV 318

Query: 241 RFFGCPYSVSRYLPVVRDSEKRHTK 265
            FFG  YSV+R+LP  R + KRH K
Sbjct: 319 TFFGLQYSVTRFLPTFRVTRKRHIK 343

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449526662|ref|XP_004170332.1| PREDICTED: LOW QUALITY PROTEIN: probable S-acyltransferase At3g18620-like [Cucumis sativus]

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 183/265 (69%), Positives = 212/265 (80%), Gaps = 5/265 (1%)

Query: 3   FVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYP 62
           FVICGGVWAV+PVVFS++ FCGIFH  + +  +VSTLS F L AF  PGA P VLWGSYP
Sbjct: 104 FVICGGVWAVYPVVFSINQFCGIFHSTVTLVFAVSTLSSFTLTAFRSPGAPPNVLWGSYP 163

Query: 63  LVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFL 122
            V KGDLENYTFCHYC KPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGA NH++FILFL
Sbjct: 164 AVEKGDLENYTFCHYCLKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAGNHKHFILFL 223

Query: 123 ISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMS 182
           ISA+VSTIYV+IM+V + LH+W PLSI      N  G+ L    +K+II A+L+S  L+S
Sbjct: 224 ISAIVSTIYVSIMAVYSVLHMWPPLSIHEFVHLNGSGSMLGWNLLKDIIHAVLSSTTLLS 283

Query: 183 SRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRF 242
            RG  L+YLF+SS SV +GL VLL QQL+YIYEGKTYLSHL+SQG DG  +KDC+N+LRF
Sbjct: 284 IRGFTLIYLFISSFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDG--EKDCRNLLRF 341

Query: 243 FGCPYSVSRY--LPVVRDSEKRHTK 265
           FGCP SVS Y  LP+ R S+KRH K
Sbjct: 342 FGCP-SVSFYWHLPIFRRSKKRHEK 365

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461727|ref|XP_004148593.1| PREDICTED: probable S-acyltransferase At3g18620-like [Cucumis sativus]

 Score =  364 bits (934), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 183/265 (69%), Positives = 212/265 (80%), Gaps = 5/265 (1%)

Query: 3   FVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYP 62
           FVICGGVWAV+PVVFS++ FCGIFH  + +  +VSTLS F L AF  PGA P VLWGSYP
Sbjct: 104 FVICGGVWAVYPVVFSINQFCGIFHSTVTLVFAVSTLSSFTLTAFRSPGAPPNVLWGSYP 163

Query: 63  LVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFL 122
            V KGDLENYTFCHYC KPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGA NH++FILFL
Sbjct: 164 AVEKGDLENYTFCHYCLKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAGNHKHFILFL 223

Query: 123 ISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMS 182
           ISA+VSTIYV+IM+V + LH+W PLSI      N  G+ L    +K+II A+L+S  L+S
Sbjct: 224 ISAIVSTIYVSIMAVYSVLHMWPPLSIHEFVHLNGSGSMLGWNLLKDIIHAVLSSTTLLS 283

Query: 183 SRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRF 242
            RG  L+YLF+SS SV +GL VLL QQL+YIYEGKTYLSHL+SQG DG  +KDC+N+LRF
Sbjct: 284 IRGFTLIYLFISSFSVQIGLIVLLCQQLWYIYEGKTYLSHLSSQGDDG--EKDCRNLLRF 341

Query: 243 FGCPYSVSRY--LPVVRDSEKRHTK 265
           FGCP SVS Y  LP+ R S+KRH K
Sbjct: 342 FGCP-SVSFYWHLPIFRRSKKRHEK 365

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576985|ref|XP_003556610.1| PREDICTED: probable S-acyltransferase At3g18620-like [Glycine max]

 Score =  362 bits (928), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 171/265 (64%), Positives = 205/265 (77%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M FVI GGVWAV+PVVFSVS  CG+FH +I   LSV+T+S F  AAF C G  P +LWGS
Sbjct: 78  MFFVIFGGVWAVYPVVFSVSILCGVFHSIITAILSVATISFFSFAAFRCAGTPPNILWGS 137

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP VGK DLENYT+CHYCSKPKSPR HHCRSC  CVLDMDHHCPFIGNCVGAANHR FI 
Sbjct: 138 YPTVGKSDLENYTYCHYCSKPKSPRAHHCRSCRKCVLDMDHHCPFIGNCVGAANHRSFIA 197

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           FLISAV+STIYV+IMSV +GL  W PL       + V  ++LA R + EI++A + SALL
Sbjct: 198 FLISAVLSTIYVSIMSVYSGLRTWPPLKYSLGHINGVSSSELAWRIMNEIVVAFMRSALL 257

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNIL 240
           +SSRGL+L YLF++S+S+ +GLSVLLWQQL YIY+GKTYLSHL+SQ     ++KDCQN++
Sbjct: 258 LSSRGLILAYLFIASVSLQIGLSVLLWQQLSYIYQGKTYLSHLSSQADSEEEKKDCQNLV 317

Query: 241 RFFGCPYSVSRYLPVVRDSEKRHTK 265
            FF   Y V+R+LP  R + K+H K
Sbjct: 318 TFFSLQYFVTRFLPTFRVTRKKHIK 342

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096562|ref|XP_002310659.1| predicted protein [Populus trichocarpa] gi|222853562|gb|EEE91109.1| predicted protein [Populus trichocarpa]

 Score =  359 bits (921), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 170/263 (64%), Positives = 208/263 (79%)

Query: 3   FVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYP 62
           FVICGGVWAV+PV+FS+S+FCGIFHL I   LS++T+ +F L A    G  PL+ WG YP
Sbjct: 80  FVICGGVWAVYPVIFSISFFCGIFHLTITGILSITTVLLFTLTALRSAGTPPLIEWGGYP 139

Query: 63  LVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFL 122
            VGK  LENYTFCHYCSKPKSPRTHHCR+CG+CVLDMDHHCPFIGNCVGAANH++FI FL
Sbjct: 140 AVGKKQLENYTFCHYCSKPKSPRTHHCRTCGICVLDMDHHCPFIGNCVGAANHQHFIAFL 199

Query: 123 ISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMS 182
           IS +VST+YV IMS  A LH+W PL+ R           LA R ++++ IAL++SA+L+S
Sbjct: 200 ISVLVSTMYVTIMSAYAVLHVWPPLTYRYLDHFRASDRSLAWRALQDVAIALVSSAVLLS 259

Query: 183 SRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNILRF 242
           +RGL+LVYLFVSSIS+ +G+SVLLWQQ  YIYEG+TYLS L+ +GGD A +KDC+N+ RF
Sbjct: 260 TRGLVLVYLFVSSISLEIGISVLLWQQFCYIYEGQTYLSSLSMRGGDEAGEKDCKNLFRF 319

Query: 243 FGCPYSVSRYLPVVRDSEKRHTK 265
           FGCPY V R+LP   +S KRH K
Sbjct: 320 FGCPYPVLRFLPNFWNSPKRHEK 342

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357473861|ref|XP_003607215.1| Palmitoyltransferase ZDHHC17 [Medicago truncatula] gi|355508270|gb|AES89412.1| Palmitoyltransferase ZDHHC17 [Medicago truncatula]

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 163/266 (61%), Positives = 203/266 (76%), Gaps = 4/266 (1%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M F+I GGVWA++PVV+S+S   GIFH +I + L+V+T+S F L+AF C G  P ++WGS
Sbjct: 99  MLFIIFGGVWAIYPVVYSIS-LSGIFHSIITVTLAVATISSFSLSAFRCAGTPPNLVWGS 157

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           YP +G GDLENYTFCHYCS+PKSPRTHHCRSCG C+L+MDHHCPFIGNCVGAANHR FI 
Sbjct: 158 YPTIGNGDLENYTFCHYCSRPKSPRTHHCRSCGKCILNMDHHCPFIGNCVGAANHRSFIA 217

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
           FLIS + STIY++I+SV AG H+W PL+            +LA R VKE I A + S  L
Sbjct: 218 FLISGLFSTIYISIVSVHAGFHMWPPLTYSIGRIHGTTIENLAWRIVKETIFAFMRSVQL 277

Query: 181 MSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNIL 240
           +S+RG +L+YLFV+S S+ +GLSVLLWQQL +IYEG+TYLSHL+SQG +G   KDCQN++
Sbjct: 278 LSARGFILIYLFVASFSMMIGLSVLLWQQLRFIYEGETYLSHLSSQGHNGDGMKDCQNLV 337

Query: 241 RFFGCPYSVSRYLP---VVRDSEKRH 263
           RFFG  +SV RYLP   V   SE+ H
Sbjct: 338 RFFGFSFSVKRYLPKFLVSSYSEETH 363

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830520|ref|XP_002883142.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297328982|gb|EFH59401.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  334 bits (856), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 161/268 (60%), Positives = 202/268 (75%), Gaps = 5/268 (1%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M FVICGG+WA +PV+FS+S  CGIFH V   CL++STLS F L AF C G    +L+G+
Sbjct: 76  MLFVICGGIWAAYPVLFSISLACGIFHSVTTACLAISTLSTFILVAFKCAGKPTNILYGT 135

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           +P VG G L NYTFC+YCSKPKSPRTHHCR+CGMCVLDMDHHCPFIGNCVGA NH++FI 
Sbjct: 136 HPGVGNGGLNNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKHFIA 195

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVV----GTDLA-MRFVKEIIIALL 175
           FLISAV STIY A+M V + +HI  P+   +   S+V     G   + +R VK I +  +
Sbjct: 196 FLISAVTSTIYAAVMCVYSLIHILPPMENGAAYASDVAHVAHGNSFSILRVVKNIFLTYI 255

Query: 176 NSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKD 235
            +A+ +S R L+LVYLFV+S+SV +GLSVLLWQQL YIYEGKTYLSHL+SQG +   +K 
Sbjct: 256 ANAVFISVRSLVLVYLFVASVSVAIGLSVLLWQQLSYIYEGKTYLSHLSSQGTEEDGEKS 315

Query: 236 CQNILRFFGCPYSVSRYLPVVRDSEKRH 263
           C+N+L FFGCP+S+ R+LP +R+  KRH
Sbjct: 316 CRNLLTFFGCPHSIERHLPTIRNLRKRH 343

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331163|ref|NP_188492.2| putative S-acyltransferase [Arabidopsis thaliana] gi|75273387|sp|Q9LIH7.1|ZDHC7_ARATH RecName: Full=Probable S-acyltransferase At3g18620; AltName: Full=Probable palmitoyltransferase At3g18620; AltName: Full=Zinc finger DHHC domain-containing protein At3g18620 gi|9294323|dbj|BAB02220.1| unnamed protein product [Arabidopsis thaliana] gi|19424025|gb|AAL87266.1| unknown protein [Arabidopsis thaliana] gi|21281223|gb|AAM45051.1| unknown protein [Arabidopsis thaliana] gi|332642602|gb|AEE76123.1| putative S-acyltransferase [Arabidopsis thaliana]

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 160/268 (59%), Positives = 201/268 (75%), Gaps = 5/268 (1%)

Query: 1   MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
           M FVICGG+WA +PV+FS+S  CGIFH V    L++STLS F L AF C G    +L+G+
Sbjct: 76  MLFVICGGIWAAYPVLFSISLACGIFHSVTTATLAISTLSTFILVAFKCAGKPTNILYGT 135

Query: 61  YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
           +P VG G L NYTFC+YCSKPKSPRTHHCR+CGMCVLDMDHHCPFIGNCVGA NH+YFI 
Sbjct: 136 HPGVGNGALNNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIA 195

Query: 121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVV----GTDLA-MRFVKEIIIALL 175
           FLISAV+ST Y A+M V   +HI  P+   +   S+V     G  ++ +R VK I +  +
Sbjct: 196 FLISAVISTSYAAVMCVYTLIHILPPIEKGAAYASDVAHVAHGNSISILRVVKNICLTYI 255

Query: 176 NSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKD 235
            +A+ +S R L+LVYLFV+S+SV +GLSVLLWQQL YIYEGKTYLSHL+SQG +   +K 
Sbjct: 256 ANAVFISVRSLVLVYLFVASVSVAIGLSVLLWQQLSYIYEGKTYLSHLSSQGTEEDGEKS 315

Query: 236 CQNILRFFGCPYSVSRYLPVVRDSEKRH 263
           C+N+L FFGCP+S+ R+LP +R+  KRH
Sbjct: 316 CRNLLTFFGCPHSIERHLPTIRNLRKRH 343

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580618|ref|XP_002531132.1| zinc finger protein, putative [Ricinus communis] gi|223529281|gb|EEF31252.1| zinc finger protein, putative [Ricinus communis]

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 152/225 (67%), Positives = 175/225 (77%)

Query: 41  MFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMD 100
           MF LAAF   GA P+  WGSYP+VGKG LEN+TFCHYCSKPKSPRTHHCRSCG C+LDMD
Sbjct: 1   MFSLAAFRFAGAPPVRQWGSYPVVGKGFLENHTFCHYCSKPKSPRTHHCRSCGKCILDMD 60

Query: 101 HHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGT 160
           HHCPFIGNCVGA NHR+FI FLISAV+STIYV+IMS  A +H+W  L  RS    N + +
Sbjct: 61  HHCPFIGNCVGAENHRHFIAFLISAVISTIYVSIMSAYAAMHVWPTLPHRSLGYLNGMSS 120

Query: 161 DLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYL 220
            +A R +KE +IA L S L +S RGL+LVYL  +S+SV +GLSVLLWQQL YIY G TYL
Sbjct: 121 YVAWRILKEAVIAFLRSTLFLSPRGLVLVYLLFASVSVGIGLSVLLWQQLCYIYRGTTYL 180

Query: 221 SHLNSQGGDGADQKDCQNILRFFGCPYSVSRYLPVVRDSEKRHTK 265
           SHL+ QGGD   +KDC N+ RFFGCPYSVSR LP  R+S KRH K
Sbjct: 181 SHLSDQGGDDVGEKDCNNLFRFFGCPYSVSRLLPSARNSPKRHKK 225

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2086894	345	AT3G18620 [Arabidopsis thalian	0.992	0.762	0.597	6e-87
DICTYBASE|DDB_G0293930	319	DDB_G0293930 "putative palmito	0.558	0.463	0.343	3.4e-22
MGI|MGI:1921418	361	Zdhhc16 "zinc finger, DHHC dom	0.267	0.196	0.478	3.4e-20
ZFIN|ZDB-GENE-040426-1301	386	zdhhc16b "zinc finger, DHHC do	0.433	0.297	0.349	5.3e-20
TAIR|locus:2083504	286	AT3G09320 [Arabidopsis thalian	0.505	0.468	0.335	9.3e-20
UNIPROTKB|Q58CU4	377	ZDHHC16 "Probable palmitoyltra	0.822	0.578	0.255	2.1e-19
DICTYBASE|DDB_G0279395	442	DDB_G0279395 "DHHC-type zinc f	0.445	0.266	0.362	2.3e-19
UNIPROTKB|F1S8Y3	377	LOC100152371 "Uncharacterized	0.822	0.578	0.255	2.8e-19
UNIPROTKB|E2RT02	377	ZDHHC16 "Uncharacterized prote	0.822	0.578	0.255	6.1e-19
TAIR|locus:2132654	324	AT4G22750 [Arabidopsis thalian	0.479	0.391	0.342	7.4e-19

TAIR|locus:2086894 AT3G18620 [Arabidopsis thaliana (taxid:3702)]

 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 160/268 (59%), Positives = 201/268 (75%)

Query:     1 MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
             M FVICGG+WA +PV+FS+S  CGIFH V    L++STLS F L AF C G    +L+G+
Sbjct:    76 MLFVICGGIWAAYPVLFSISLACGIFHSVTTATLAISTLSTFILVAFKCAGKPTNILYGT 135

Query:    61 YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
             +P VG G L NYTFC+YCSKPKSPRTHHCR+CGMCVLDMDHHCPFIGNCVGA NH+YFI 
Sbjct:   136 HPGVGNGALNNYTFCNYCSKPKSPRTHHCRTCGMCVLDMDHHCPFIGNCVGAGNHKYFIA 195

Query:   121 FLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVV----GTDLA-MRFVKEIIIALL 175
             FLISAV+ST Y A+M V   +HI  P+   +   S+V     G  ++ +R VK I +  +
Sbjct:   196 FLISAVISTSYAAVMCVYTLIHILPPIEKGAAYASDVAHVAHGNSISILRVVKNICLTYI 255

Query:   176 NSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKD 235
              +A+ +S R L+LVYLFV+S+SV +GLSVLLWQQL YIYEGKTYLSHL+SQG +   +K 
Sbjct:   256 ANAVFISVRSLVLVYLFVASVSVAIGLSVLLWQQLSYIYEGKTYLSHLSSQGTEEDGEKS 315

Query:   236 CQNILRFFGCPYSVSRYLPVVRDSEKRH 263
             C+N+L FFGCP+S+ R+LP +R+  KRH
Sbjct:   316 CRNLLTFFGCPHSIERHLPTIRNLRKRH 343

GO:0005886 "plasma membrane" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0293930 DDB_G0293930 "putative palmitoyltransferase" [Dictyostelium discoideum (taxid:44689)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 58/169 (34%), Positives = 85/169 (50%)

Query:    21 YFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASP---------LVLWGSYPLVGKGDLEN 71
             +   +FH  ++  L  +    + L     PG  P         ++ + S   + +   E 
Sbjct:    74 FLYSLFHYSLSFFLLFNVAFNYALTIITSPGHPPRESDYSEEKIIEFKSIKTIKRS--ET 131

Query:    72 YTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIY 131
             Y FC +C  PK  RTHHC+ CG CVL MDHHCP++ NCVGA NHRYF+LFL+   +S +Y
Sbjct:   132 YRFCIHCRLPKEERTHHCQLCGTCVLKMDHHCPWVNNCVGANNHRYFMLFLVYLWISCVY 191

Query:   132 VAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALL 180
             V I+S     H+++       + S  +   + M FV  + IA     LL
Sbjct:   192 VCILSYP---HVFN-------SESGYIPFSMLMSFVITLTIAFALGGLL 230

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:1921418 Zdhhc16 "zinc finger, DHHC domain containing 16" [Mus musculus (taxid:10090)]

 Score = 210 (79.0 bits), Expect = 3.4e-20, Sum P(2) = 3.4e-20
 Identities = 34/71 (47%), Positives = 41/71 (57%)

Query:    61 YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFIL 120
             YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHRYF  
Sbjct:   143 YPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFS 202

Query:   121 FLISAVVSTIY 131
             F     +  +Y
Sbjct:   203 FCFFMTLGCVY 213

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1301 zdhhc16b "zinc finger, DHHC domain containing 16b" [Danio rerio (taxid:7955)]

 Score = 205 (77.2 bits), Expect = 5.3e-20, Sum P(2) = 5.3e-20
 Identities = 43/123 (34%), Positives = 60/123 (48%)

Query:    12 VHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLEN 71
             V P++FS SY   ++ ++  +C     L M     +      P      +P   K D+  
Sbjct:    96 VLPIIFS-SY--PVYWILWHLCYGHWNLLMVVFHYYKATTTQP-----GFPPQEKTDIPT 147

Query:    72 YTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIY 131
              T C  C  PK  RTHHC  C   +L MDHHCP++ NCVG  NHRYF  F +   +  +Y
Sbjct:   148 VTICKKCIVPKPARTHHCSICNTIILIMDHHCPWLNNCVGHFNHRYFFSFCLFMTMGCVY 207

Query:   132 VAI 134
              +I
Sbjct:   208 CSI 210

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2083504 AT3G09320 [Arabidopsis thaliana (taxid:3702)]

 Score = 208 (78.3 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
 Identities = 49/146 (33%), Positives = 73/146 (50%)

Query:     1 MGFVICGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS 60
             +GF+    V+      FS++   GI +      L++  +  + +A F  PG  PL     
Sbjct:    19 IGFIYFASVFTFIDRWFSLTSSPGIANAAAFTALALMCIYNYSIAVFRDPGRVPLNYMPD 78

Query:    61 --------YPLVGKG-DLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVG 111
                     + +  KG DL    +C  CS  K PR HHCR C  CVL MDHHC +I NCVG
Sbjct:    79 VEDPESPVHEIKRKGGDLR---YCQKCSHFKPPRAHHCRVCKRCVLRMDHHCIWINNCVG 135

Query:   112 AANHRYFILFLISAVVSTIYVAIMSV 137
               N++ F +F++ AV + +Y  ++ V
Sbjct:   136 HTNYKVFFVFVVYAVTACVYSLVLLV 161

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q58CU4 ZDHHC16 "Probable palmitoyltransferase ZDHHC16" [Bos taurus (taxid:9913)]

 Score = 234 (87.4 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 59/231 (25%), Positives = 104/231 (45%)

Query:     6 CGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWG------ 59
             CG V+ V  +V + S     +  V+ + L   ++   C   F+      L+++       
Sbjct:    79 CGVVFVVLVIVLTSSIVAIAYLCVLPLILQTYSVPRLCWHFFYSHWNLILIVFHYYQAIT 138

Query:    60 ---SYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHR 116
                 YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHR
Sbjct:   139 TPPGYPPQGRNDMTTVSICKKCINPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198

Query:   117 YFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLN 176
             YF  F     +  +Y +  S       ++ +        N +   +A +   +      +
Sbjct:   199 YFFSFCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKLQA-VANQTYHQTPPPTFS 257

Query:   177 SALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQ 226
                 ++ + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +
Sbjct:   258 FRERVTHKSLVYLWFLCSSVALALG-ALTIWHAVL-ISRGETSIERHINKK 306

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0279395 DDB_G0279395 "DHHC-type zinc finger-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 196 (74.1 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
 Identities = 46/127 (36%), Positives = 69/127 (54%)

Query:    74 FCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVA 133
             FC  C   K PRTHHC+ C  C+L  DHHCP+IGNC G  N ++FI FL   V+ T  + 
Sbjct:   130 FCSQCCAFKPPRTHHCKQCKRCILKHDHHCPWIGNCTGFRNQKFFIQFLFYVVILTS-IT 188

Query:   134 IMSVT-AGLHIWSPLSIRSHAPSNVVGTDLAMR---FVKEIIIALLNSALLMSSRGLLLV 189
             I ++T +G +I + L+  + A  N    + +      V  II+ ++    + +  G+L V
Sbjct:   189 ITTLTISGFYILN-LNDSNSAKINNNNNNNSNEVDFLVSSIIVTIM---YIFNFSGVLPV 244

Query:   190 YLFVSSI 196
              L VS +
Sbjct:   245 LLGVSGL 251

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1S8Y3 LOC100152371 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 233 (87.1 bits), Expect = 2.8e-19, P = 2.8e-19
 Identities = 59/231 (25%), Positives = 104/231 (45%)

Query:     6 CGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWG------ 59
             CG V+ V  +V + S     +  V+ + L   ++   C   F+      L+++       
Sbjct:    79 CGVVFVVLVIVLTSSIVAIAYLCVLPLILQTYSVPRLCWHFFYSHWNLILIVFHYYQAIT 138

Query:    60 ---SYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHR 116
                 YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHR
Sbjct:   139 TPPGYPPQGRNDITTVSICKKCINPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198

Query:   117 YFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLN 176
             YF  F     +  +Y +  S       ++ +        N +   +A +   +      +
Sbjct:   199 YFFSFCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKLQA-VANQTYHQTPPPTFS 257

Query:   177 SALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQ 226
                 ++ + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +
Sbjct:   258 FRERVTHKSLVYLWFLCSSVALALG-ALTVWHAVL-ISRGETSIERHINKK 306

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RT02 ZDHHC16 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 230 (86.0 bits), Expect = 6.1e-19, P = 6.1e-19
 Identities = 59/231 (25%), Positives = 104/231 (45%)

Query:     6 CGGVWAVHPVVFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWG------ 59
             CG V+ V  +V + S     +  V+ + L   ++   C   F+      L+++       
Sbjct:    79 CGVVFVVLVIVLTSSIVAIAYLCVLPLILRTYSVPRLCWHFFYSHWNLILIVFHYYQAIT 138

Query:    60 ---SYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHR 116
                 YP  G+ D+   + C  C  PK  RTHHC  C  CVL MDHHCP++ NCVG  NHR
Sbjct:   139 TPPGYPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 198

Query:   117 YFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLN 176
             YF  F     +  +Y +  S       ++ +        N +   +A +   +      +
Sbjct:   199 YFFSFCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKLQA-VANQTYHQTPPPSFS 257

Query:   177 SALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLS-HLNSQ 226
                 ++ + L+ ++   SS+++ LG ++ +W  +  I  G+T +  H+N +
Sbjct:   258 FRERVTHKSLVYLWFLCSSVALALG-ALTIWHAVL-ISRGETSIERHINKK 306

GO:0008270 "zinc ion binding" evidence=IEA

TAIR|locus:2132654 AT4G22750 [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 7.4e-19, Sum P(2) = 7.4e-19
 Identities = 48/140 (34%), Positives = 74/140 (52%)

Query:    59 GSYPLVGK---GDLENY--TFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAA 113
             G+  L+G+   GD  ++   +C  C++ K PR+HHC  CG C+L MDHHC ++ NCVGA 
Sbjct:   119 GNQALIGEASVGDSSSHGVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGAN 178

Query:   114 NHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIA 173
             N++ F+LFL    + T  VA+  +   L  +S           V    LA  FV  +   
Sbjct:   179 NYKSFLLFLFYTFLETTVVAVSLLPIFLVFFSD----GDGDITVSPGSLAASFVAFV--- 231

Query:   174 LLNSALLMSSRGLLLVYLFV 193
              LN A  +S  G L++++ +
Sbjct:   232 -LNIAFALSVLGFLIMHIML 250

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006623 "protein targeting to vacuole" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0016192 "vesicle-mediated transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LIH7	ZDHC7_ARATH	2, ., 3, ., 1, ., -	0.5970	0.9924	0.7623	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
pfam01529	167	pfam01529, zf-DHHC, DHHC palmitoyltransferase	5e-27
COG5273	309	COG5273, COG5273, Uncharacterized protein containi	4e-20

>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase

 Score =  102 bits (256), Expect = 5e-27
 Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 28/153 (18%)

Query: 74  FCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVA 133
           FC  C+  K PR+HHCR C  CVL  DHHCP++ NC+G  NH+YF+LFL+   +  I + 
Sbjct: 43  FCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLFLLYLTLYLILLL 102

Query: 134 IMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFV 193
           ++S                              V  I    L   L++S    ++  L V
Sbjct: 103 VLSF--------------------------YYLVYLIRNIELFFFLILSLFSSII--LLV 134

Query: 194 SSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQ 226
            S+   L LS LL+  L+ I +  T   ++  +
Sbjct: 135 LSLFFLLFLSFLLFFHLYLILKNITTYEYIKKK 167

This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

 Score = 87.1 bits (216), Expect = 4e-20
 Identities = 29/61 (47%), Positives = 39/61 (63%)

Query: 74  FCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVA 133
           FC  C+  K PR+HHC  C  CVL  DHHCP+I NCVG  N+R+F  FL+  ++  + V 
Sbjct: 111 FCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVL 170

Query: 134 I 134
           +
Sbjct: 171 L 171

Length = 309

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	100.0
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG1314	414	consensus DHHC-type Zn-finger protein [General fun	100.0
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	100.0
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	100.0
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	100.0
KOG1312	341	consensus DHHC-type Zn-finger proteins [General fu	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.94
KOG1313	309	consensus DHHC-type Zn-finger proteins [General fu	97.09
COG5273	309	Uncharacterized protein containing DHHC-type Zn fi	96.51
KOG1311	299	consensus DHHC-type Zn-finger proteins [General fu	93.38
PF01529	174	zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0	93.29
PF13240	23	zinc_ribbon_2: zinc-ribbon domain	93.22
PF13248	26	zf-ribbon_3: zinc-ribbon domain	90.41
PRK04136	48	rpl40e 50S ribosomal protein L40e; Provisional	89.88
KOG1315	307	consensus Predicted DHHC-type Zn-finger protein [G	86.52
PF12773	50	DZR: Double zinc ribbon	86.2
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	84.97
PF06906	57	DUF1272: Protein of unknown function (DUF1272); In	82.87

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.7e-46  Score=325.51  Aligned_cols=209  Identities=26%  Similarity=0.448  Sum_probs=158.2

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCC---CCC-------------CCCCccccccccccCCCCCC
Q 024587           22 FCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYP---LVG-------------KGDLENYTFCHYCSKPKSPR   85 (265)
Q Consensus        22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~---~~~-------------~~~~~~~~~C~~C~~~kP~R   85 (265)
                      ....+.++++..++++.+.+|.+++++|||.+|.....+.+   ..+             .+.....|+|.+|+..||+|
T Consensus        43 ~~~~~~ll~~~~ll~m~~~sy~~~vf~~pg~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~R~C~kC~~iKPdR  122 (307)
T KOG1315|consen   43 IPSVLLLLLFHLLLIMFLWSYFRTVFTDPGRVPDSYRPSVEDEDSLENGSDNERDLPGYTRTSDGAVRYCDKCKCIKPDR  122 (307)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHheeEecCCCCccccCCCcCccccccccCcccccceeeEecCCCCceeecccccccCCc
Confidence            45567778888999999999999999999999963211110   001             11122679999999999999


Q ss_pred             CCCCCCCCcccCCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCccCcchhHH
Q 024587           86 THHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMR  165 (265)
Q Consensus        86 s~HC~~C~~CV~r~DHHC~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (265)
                      ||||++|+|||+||||||||+|||||.+|||+|++|++|..+.+++.++.....+...+.....           ++.  
T Consensus       123 aHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~~~lv~~~~~~~~~~~~~~~-----------~~~--  189 (307)
T KOG1315|consen  123 AHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSIYVLVTTLIGFTKYFQGGAG-----------PSS--  189 (307)
T ss_pred             cccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----------Cch--
Confidence            9999999999999999999999999999999999999999999999988887776665522100           000  


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeEEecccCCCCC--CCchh---hHHHH
Q 024587          166 FVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDG--ADQKD---CQNIL  240 (265)
Q Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~l~~~~l~li~~n~Tt~E~~~~~~~~~--~~~~~---~~N~~  240 (265)
                                       .......++++.+..+.+.++.++++|+++|.+|+||+|..+.+....  ++++.   ..|++
T Consensus       190 -----------------~~~~~~~~~~~~~~~f~i~l~~~l~~h~~Li~~N~TTiE~~~~~~~~~~~~~~~~~~~~~n~~  252 (307)
T KOG1315|consen  190 -----------------LLLFFIVFLFLVAIAFSISLSGLLCFHTYLILKNKTTIEAYKSPVFRSGLHNKNGFNLYVNFR  252 (307)
T ss_pred             -----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhhccccccccccccCCcceeecHH
Confidence                             001123334455556667777899999999999999999988753221  33333   35999


Q ss_pred             hhcCCCCcceeeecccCCCcc
Q 024587          241 RFFGCPYSVSRYLPVVRDSEK  261 (265)
Q Consensus       241 ~vfG~~~~~~w~~P~~~~~~~  261 (265)
                      |+||.++ ..|++|..+..++
T Consensus       253 ~vfg~~~-~~wl~P~~~s~~~  272 (307)
T KOG1315|consen  253 EVFGSNL-LYWLLPIDSSWGD  272 (307)
T ss_pred             HHhCCCc-eEEeccccCcccc
Confidence            9999987 8999999766654

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=1.5e-43  Score=312.96  Aligned_cols=206  Identities=27%  Similarity=0.449  Sum_probs=150.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCCCCC----------CCCCCCccccccccccCCCCCCCCCCCCCCc
Q 024587           28 LVIAICLSVSTLSMFCLAAFH---CPGASPLVLWGSYPL----------VGKGDLENYTFCHYCSKPKSPRTHHCRSCGM   94 (265)
Q Consensus        28 ~~~~~~l~~~~~~~~~~~~~~---dPG~~p~~~~~~~~~----------~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~   94 (265)
                      .....++.+..+.....+..+   |||.+|+......+.          .+++...++++|.+|+..||||||||++||+
T Consensus        56 ~~~~~if~~~~~~~~~~~~~~~~sdpg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~rPpRs~HCsvC~~  135 (299)
T KOG1311|consen   56 LVLGAIFFLLNILNLMLACFRMLSDPGIVPRADDEQIEDPERAPLYKNVDVNGIQVEWKYCDTCQLYRPPRSSHCSVCNN  135 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCCCceecCcccCCCCCccccccCCCcccCCcccceEEcCcCcccCCCCcccchhhcc
Confidence            344445555555555555555   999999842111111          1123344689999999999999999999999


Q ss_pred             ccCCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCccCcchhHHHHHHHHHHH
Q 024587           95 CVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIAL  174 (265)
Q Consensus        95 CV~r~DHHC~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (265)
                      ||+||||||||+|||||++|||||++|+++.++++++.+....+.......+....             +...       
T Consensus       136 CV~rfDHHC~WvnnCVG~rNyr~F~~f~~~~~l~~i~~~~~~~~~~~~~~~~~~~~-------------~~~~-------  195 (299)
T KOG1311|consen  136 CVLRFDHHCPWLNNCIGERNYRYFVLFLFYLALGVLLALAFLFYELLQRADNLKVN-------------LTPV-------  195 (299)
T ss_pred             cccccCCCCCCccceECCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-------------cccc-------
Confidence            99999999999999999999999999999999999998888776655433322110             1000       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeEEeccc----CCCCCCCchhhHHHHhhcCCCCcce
Q 024587          175 LNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNS----QGGDGADQKDCQNILRFFGCPYSVS  250 (265)
Q Consensus       175 ~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~l~~~~l~li~~n~Tt~E~~~~----~~~~~~~~~~~~N~~~vfG~~~~~~  250 (265)
                           .........+++.+.++.....++.|+.+|++++.+|+||+|+.++    .+.+++++|.++|++++||.+....
T Consensus       196 -----~~~~~~~~~~~l~~~~~~~~~~~~~l~~fh~~li~~~~Tt~e~~~~~~~~~~~~~~~~g~~~n~~~~~~~~~~~~  270 (299)
T KOG1311|consen  196 -----LIPAGTFLSALLGLLSALFLAFTSALLCFHIYLIKSGSTTYESIKSLDFVSRSNPYDLGLLKNLQEVFGGPLPLS  270 (299)
T ss_pred             -----ccchhHHHHHHHHHHHHHHHHHHHHHHHhheeeEecCcchhhhhhccccccccCCCchhHHHHHHHHhCCCCCcc
Confidence                 0000011223334556666777789999999999999999999774    2236788888899999999999999


Q ss_pred             eeecccCC
Q 024587          251 RYLPVVRD  258 (265)
Q Consensus       251 w~~P~~~~  258 (265)
                      |+.|..+.
T Consensus       271 ~~~p~~~~  278 (299)
T KOG1311|consen  271 WLSPFARS  278 (299)
T ss_pred             cccccccC
Confidence            99998765

>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only]

Probab=100.00  E-value=1.6e-42  Score=297.01  Aligned_cols=205  Identities=31%  Similarity=0.474  Sum_probs=146.8

Q ss_pred             hcchhhhHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCcc
Q 024587           16 VFSVSYFCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMC   95 (265)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~C   95 (265)
                      ++..+++.+..+.+.+.....+.+.+|+.+++++||.+|.. +   .+....+....+||.+|+.+|+||||||+.||||
T Consensus        39 w~p~ss~~g~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~-w---kPe~~~D~~~lqfCk~CqgYKapRSHHCrkCnrC  114 (414)
T KOG1314|consen   39 WFPLSSFLGVPNQITFLLWTSMILYNYFNAIFTGPGFVPLG-W---KPENPKDEMFLQFCKKCQGYKAPRSHHCRKCNRC  114 (414)
T ss_pred             hccccchhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-C---CCCCChhHHHHHHHhhccCcCCCccccchHHHHH
Confidence            45677888999999999999999999999999999999973 2   2221223335689999999999999999999999


Q ss_pred             cCCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCccCcchhHHHHHHHHHHHH
Q 024587           96 VLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALL  175 (265)
Q Consensus        96 V~r~DHHC~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (265)
                      |.+|||||||+|||||..||.||+.||++..++|+-..+....+.++......+...+.-+.          .       
T Consensus       115 vmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~tiI~~~~~~~~Iy~~W~~~~g~~hl----------p-------  177 (414)
T KOG1314|consen  115 VMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTIILVCAQYRGIYFRWYIKYGLRHL----------P-------  177 (414)
T ss_pred             HHhhccCCcchhhcccccccHHHHHHHHHHHHhcccceeeehhHHHHHHHHHHHhhcccccC----------c-------
Confidence            99999999999999999999999999999999887766554444333221111100000000          0       


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeEEecccC----------------CCCCCCchhhH-H
Q 024587          176 NSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQ----------------GGDGADQKDCQ-N  238 (265)
Q Consensus       176 ~~~~~~~~~~~~~i~~~~~~~~~~i~~~~l~~~~l~li~~n~Tt~E~~~~~----------------~~~~~~~~~~~-N  238 (265)
                       +.++.....+.+++.+-+++.+.+++++|+..|+..|.+|+|.+|.+..+                -.-+++.| |+ |
T Consensus       178 -~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr~~~~~d~~~~f~ypydlg-Wr~n  255 (414)
T KOG1314|consen  178 -IVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRREYYFNDDEGEFTYPYDLG-WRIN  255 (414)
T ss_pred             -eeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHhhccCCCCceeeecccc-cccc
Confidence             00011111123344445556667788999999999999999999965311                01135666 87 9


Q ss_pred             HHhhc
Q 024587          239 ILRFF  243 (265)
Q Consensus       239 ~~~vf  243 (265)
                      +++||
T Consensus       256 ~r~vf  260 (414)
T KOG1314|consen  256 LREVF  260 (414)
T ss_pred             HHHHh
Confidence            99998

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=100.00  E-value=4.4e-41  Score=274.82  Aligned_cols=159  Identities=31%  Similarity=0.586  Sum_probs=120.3

Q ss_pred             HHHHHHhhcCCCCCCCCCC---------CC-----CCCCCCCCCccccccccccCCCCCCCCCCCCCCcccCCCcccccc
Q 024587           40 SMFCLAAFHCPGASPLVLW---------GS-----YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPF  105 (265)
Q Consensus        40 ~~~~~~~~~dPG~~p~~~~---------~~-----~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~w  105 (265)
                      .+|++++++|||++|+.+.         +.     .+..+++..+..++|.+|+..||+|||||+.||+||+|+||||+|
T Consensus         2 ~~~~~~~~~dPG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~kp~Rs~HC~~C~~CV~~~DHHC~w   81 (174)
T PF01529_consen    2 WSYFLTIFIDPGYVPRSNPDEDQRQEEKEEEQNQSIDSPEDDENGELKYCSTCKIIKPPRSHHCRVCNRCVLRFDHHCPW   81 (174)
T ss_pred             EEehhhheECCcccCCccccccccccccccccchhhhhhccccCCCCEECcccCCcCCCcceeccccccccccccccchh
Confidence            4788999999999998610         00     011223345578999999999999999999999999999999999


Q ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCCCccCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 024587          106 IGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSIRSHAPSNVVGTDLAMRFVKEIIIALLNSALLMSSRG  185 (265)
Q Consensus       106 i~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (265)
                      +|||||++|||+|++|+++..+++++.+..++..+...........           .+...                 .
T Consensus        82 ~~~cIG~~N~~~F~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-----------------~  133 (174)
T PF01529_consen   82 LGNCIGRRNHRYFLLFLLYLCLYCLYFFILSLYYLVRYIPSISFSS-----------FWIFS-----------------N  133 (174)
T ss_pred             hccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-----------cccch-----------------h
Confidence            9999999999999999999999999988877766665433221100           00000                 0


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeEEecccC
Q 024587          186 LLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQ  226 (265)
Q Consensus       186 ~~~i~~~~~~~~~~i~~~~l~~~~l~li~~n~Tt~E~~~~~  226 (265)
                      ...+++++.++..+++++.++..|++++++|+||+|.+++|
T Consensus       134 ~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~n~Tt~E~~~~~  174 (174)
T PF01529_consen  134 FSSIFLLIISIFFFIFVGFLLIFQLYLILRNITTYERIKRK  174 (174)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHcC
Confidence            00133445556667778899999999999999999998764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=3.7e-39  Score=268.39  Aligned_cols=182  Identities=35%  Similarity=0.591  Sum_probs=126.0

Q ss_pred             CCccccccccccCCCCCCCCCCCCCCcccCCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 024587           68 DLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPL  147 (265)
Q Consensus        68 ~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~~~~  147 (265)
                      ..++..+|.+|+.+||||+||||.|||||+||||||||+|||||..|||||++|++|+++++.|..++..+...+.....
T Consensus        98 ~~~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NHryFFlFl~~ltlat~~~~i~~~~~w~~~le~~  177 (309)
T KOG1313|consen   98 GLENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNHRYFFLFLFYLTLATSYAAIMCVYTWIDHLEPI  177 (309)
T ss_pred             CCccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence            44567899999999999999999999999999999999999999999999999999999999999888776555443322


Q ss_pred             cccCCCCC-----CccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeEEe
Q 024587          148 SIRSHAPS-----NVVGTDLAMRFVKEIIIALLNSALLMSSRGLLLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSH  222 (265)
Q Consensus       148 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~l~~~~l~li~~n~Tt~E~  222 (265)
                      ..  ...+     +.-+....-+....             +.......+.+.+..+++.++.+..+|..+|.+|.|++|.
T Consensus       178 ~~--~tay~~d~~h~~Pp~~i~r~~~~-------------i~~t~~~~~~fls~~~lv~vg~l~~W~~vlI~~G~tsi~~  242 (309)
T KOG1313|consen  178 EE--ITAYASDVAHVAPPPSILRVYKN-------------ITRTSIANLWFLSVRVLVAVGLLTAWHAVLISRGETSIEQ  242 (309)
T ss_pred             hh--cccccCcccccCCChhhhhhhhh-------------hhHHHHHHHHHHHHHHHHHHHHHHHHhheeeehhhhhHHH
Confidence            11  1111     10000001111111             1111222344555556777889999999999999999995


Q ss_pred             cccC----------CCCCCCchhhHHHHhhcC---CC-CcceeeecccCCCccccC
Q 024587          223 LNSQ----------GGDGADQKDCQNILRFFG---CP-YSVSRYLPVVRDSEKRHT  264 (265)
Q Consensus       223 ~~~~----------~~~~~~~~~~~N~~~vfG---~~-~~~~w~~P~~~~~~~~~~  264 (265)
                      ....          +.++.+.|..+||+.++|   .| .+..-++|..+.+.+++|
T Consensus       243 ~~~~~e~k~~~a~~R~~~~n~g~k~nWr~fLg~~~~r~~wk~v~lPt~~~p~~~~~  298 (309)
T KOG1313|consen  243 LINIKERKRYLAHLRSNPTNFGGKANWRNFLGLFRGRHFWKTVLLPTIRKPVKYGD  298 (309)
T ss_pred             HHHHHHhHhHHHhccCCCcccchHHHHHHhhccccCCceeEEEeccccccccccCC
Confidence            5332          234456666556665554   44 324558999988888765

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=100.00  E-value=1.1e-34  Score=255.19  Aligned_cols=116  Identities=32%  Similarity=0.614  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-C-----CCCCCCCCCCccccccccccCCCCCCCCCCCCCCcccCCCccc
Q 024587           29 VIAICLSVSTLSMFCLAAFHCPGASPLVLW-G-----SYPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHH  102 (265)
Q Consensus        29 ~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~-~-----~~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHH  102 (265)
                      +...+....+..+++....+|||..+.... .     ..+....+.....++|.+|+.+||+|||||+.|||||+|||||
T Consensus        60 i~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHH  139 (309)
T COG5273          60 ILFIVILVLASFSYLLLLVSDPGYLGENITLSGYRETISRLLDDGKFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHH  139 (309)
T ss_pred             hhhhhhhhhHHHhhHHHhhcCCCccCccccccchhhhhhhhhhcCccccceeccccccccCCCCccchhhcchhhccCcc
Confidence            334455567788999999999999984211 1     1122334555678999999999999999999999999999999


Q ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 024587          103 CPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAGLHIW  144 (265)
Q Consensus       103 C~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~  144 (265)
                      |+|+|||||.+|||+|++|+++....+++.+....+......
T Consensus       140 C~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~~~~~  181 (309)
T COG5273         140 CPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYIAGIF  181 (309)
T ss_pred             CcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999988888777666555443

>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=100.00  E-value=4.2e-34  Score=239.34  Aligned_cols=117  Identities=30%  Similarity=0.527  Sum_probs=99.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCC----CCCCCCCCCccccccccccCCCCCCCCCCCCCCcccC
Q 024587           22 FCGIFHLVIAICLSVSTLSMFCLAAFHCPGASPLVLWGS----YPLVGKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVL   97 (265)
Q Consensus        22 ~~~~~~~~~~~~l~~~~~~~~~~~~~~dPG~~p~~~~~~----~~~~~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~   97 (265)
                      ..+..+.+....+.+...+++.+++.+|||.+...++..    ||.++ ........|++|+.+||+||||||.|||||.
T Consensus        95 ~lsl~~~il~~l~vivp~i~f~ltc~snpg~i~k~n~s~~~~~ypYDy-~if~k~~kCSTCki~KPARSKHCsiCNrCV~  173 (341)
T KOG1312|consen   95 ELSLHYLILPYLLVIVPLIFFTLTCGSNPGIITKANESLFLHVYPYDY-VIFPKNVKCSTCKIRKPARSKHCSICNRCVH  173 (341)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhhhcCCCCccchhhhccceeccCccc-eeecCCCccccccCCCccccccchHHHHHHH
Confidence            456788888888888999999999999999999876643    33222 2233458999999999999999999999999


Q ss_pred             CCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024587           98 DMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTA  139 (265)
Q Consensus        98 r~DHHC~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~  139 (265)
                      |+||||.|+|||||++|.|||++|+++...++.|+.+-..+.
T Consensus       174 rfDHHCiWiNNCIG~~N~ryF~lFLL~~i~l~~yaivrlgfi  215 (341)
T KOG1312|consen  174 RFDHHCIWINNCIGAWNIRYFLLFLLTLISLATYAIVRLGFI  215 (341)
T ss_pred             HhccceEeeecccccchHHHHHHHHHHHHHHHHHHHHHHHhe
Confidence            999999999999999999999999999999888887765554

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.94  E-value=5.7e-28  Score=222.22  Aligned_cols=103  Identities=33%  Similarity=0.672  Sum_probs=81.6

Q ss_pred             HHHHHHHHHHhhcCCCCCCCCCCCCC----CCCCCCCCccc-cccccccCCCCCCCCCCCCCCcccCCCccccccccccc
Q 024587           36 VSTLSMFCLAAFHCPGASPLVLWGSY----PLVGKGDLENY-TFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCV  110 (265)
Q Consensus        36 ~~~~~~~~~~~~~dPG~~p~~~~~~~----~~~~~~~~~~~-~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wi~nCI  110 (265)
                      +..++++.+..-+|||.+|..+....    +..+.+..+.. ++|.+|..+||.|||||++|||||.|+||||||++|||
T Consensus       379 l~~~~~f~~~~rsDPg~i~~~~~~~~~tIs~l~d~gkf~~en~FC~~clirKp~rSkhc~vcnrcVarfDHhCPwi~ncV  458 (600)
T KOG0509|consen  379 LAYFITFGLFLRSDPGFIPTSTEVGRETISQLIDFGKFDLENRFCLTCLIRKPLRSKHCSVCNRCVARFDHHCPWIGNCV  458 (600)
T ss_pred             HHHHHHHHHHhccCCCCCCCchhhHHHHHHHhhccccccccccceeeeeeecCCccchhhhhHHHHhccccCCCcccccc
Confidence            44445556666699999997544322    22333444445 69999999999999999999999999999999999999


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHH
Q 024587          111 GAANHRYFILFLISAVVSTIYVAIMSVT  138 (265)
Q Consensus       111 G~~N~r~F~~fl~~~~l~~~~~~~~~~~  138 (265)
                      |.+|||+|+.|++.....+.+.+....+
T Consensus       459 G~kNh~~F~~Fl~~l~~~~~~~l~~~~~  486 (600)
T KOG0509|consen  459 GLKNHRLFVFFLLTLLTVIVFYLYLCLY  486 (600)
T ss_pred             CccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998877776655443

>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=97.09  E-value=0.0016  Score=55.69  Aligned_cols=194  Identities=20%  Similarity=0.203  Sum_probs=108.4

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCCCCCCCCCCCC-CCCCCccccccccccCCCCCCCCCCCCCCcccCCCccccccccccc
Q 024587           32 ICLSVSTLSMFCLAAFHCPGASPLVLWGSYPLV-GKGDLENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCV  110 (265)
Q Consensus        32 ~~l~~~~~~~~~~~~~~dPG~~p~~~~~~~~~~-~~~~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wi~nCI  110 (265)
                      ..+...+...|+++..+.|=..|..+....=.. ..-..++...|+.|+.-.-.=-|||.-=|.||.-..|         
T Consensus        75 i~~l~nvi~hy~ka~t~pPvgn~~~~~~SfC~KC~~pK~prTHHCsiC~kCVL~MDHHCPwinnCVG~~NH---------  145 (309)
T KOG1313|consen   75 IYLLSNVIFHYYKARTKPPVGNPGLENDSFCNKCNYPKSPRTHHCSICNKCVLKMDHHCPWINNCVGAHNH---------  145 (309)
T ss_pred             HHHHHHHHHhheeecccCCcCCCCCccccHHhhcCCCCCCCcchhhHHhhHhhccccCCchhhcccccccc---------
Confidence            344555556666666665522222111100000 0112245678999988888889999999999998887         


Q ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---cCCCCCCccCcchhHH-HHHHHHHHHHHHHHHHHHHHH
Q 024587          111 GAANHRYFILFLISAVVSTIYVAIMSVTAGLHIWSPLSI---RSHAPSNVVGTDLAMR-FVKEIIIALLNSALLMSSRGL  186 (265)
Q Consensus       111 G~~N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  186 (265)
                        +=.=.|+.++.-....+.++...+..-....+.+...   +.....+...-..... +.-+-+.    ...+++....
T Consensus       146 --ryFFlFl~~ltlat~~~~i~~~~~w~~~le~~~~~tay~~d~~h~~Pp~~i~r~~~~i~~t~~~----~~~fls~~~l  219 (309)
T KOG1313|consen  146 --RYFFLFLFYLTLATSYAAIMCVYTWIDHLEPIEEITAYASDVAHVAPPPSILRVYKNITRTSIA----NLWFLSVRVL  219 (309)
T ss_pred             --hhHHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhcccccCcccccCCChhhhhhhhhhhHHHHH----HHHHHHHHHH
Confidence              5566788888766666666644333332222222110   0000000000010011 1111000    1122232223


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeEEecccCCCCCCCchhhHHHH
Q 024587          187 LLVYLFVSSISVNLGLSVLLWQQLFYIYEGKTYLSHLNSQGGDGADQKDCQNIL  240 (265)
Q Consensus       187 ~~i~~~~~~~~~~i~~~~l~~~~l~li~~n~Tt~E~~~~~~~~~~~~~~~~N~~  240 (265)
                      +++..++.-.+.++..|...+.++.++..++++..+.+++..+...+..|+|+.
T Consensus       220 v~vg~l~~W~~vlI~~G~tsi~~~~~~~e~k~~~a~~R~~~~n~g~k~nWr~fL  273 (309)
T KOG1313|consen  220 VAVGLLTAWHAVLISRGETSIEQLINIKERKRYLAHLRSNPTNFGGKANWRNFL  273 (309)
T ss_pred             HHHHHHHHHhheeeehhhhhHHHHHHHHHhHhHHHhccCCCcccchHHHHHHhh
Confidence            334444555566778889999999999999999988888888888888898875

>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only]

Probab=96.51  E-value=0.013  Score=52.08  Aligned_cols=62  Identities=18%  Similarity=0.394  Sum_probs=48.4

Q ss_pred             CCCCCCCCCCCCcccCCCcccccccccccccc-----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 024587           82 KSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAA-----------NHRYFILFLISAVVSTIYVAIMSVTAGLHI  143 (265)
Q Consensus        82 kP~Rs~HC~~C~~CV~r~DHHC~wi~nCIG~~-----------N~r~F~~fl~~~~l~~~~~~~~~~~~~~~~  143 (265)
                      +-.+.+.|+.|+.-...+-|||.--|.||-+.           ..|..=.|..++.......+.+.....+..
T Consensus       105 ~~~~~~~C~~C~~~KP~RS~HC~~Cn~CV~k~DHHC~Wi~nCVG~~N~r~F~~Fl~~~~~~~~~~~~~~~~~~  177 (309)
T COG5273         105 KFGTENFCSTCNIYKPPRSHHCSICNRCVLKFDHHCPWINNCVGFRNYRFFYQFLLYTILVALVVLLSTAYYI  177 (309)
T ss_pred             ccccceeccccccccCCCCccchhhcchhhccCccCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            44578899999999999999999999999776           357888999888777666665554444443

>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only]

Probab=93.38  E-value=0.11  Score=46.06  Aligned_cols=41  Identities=22%  Similarity=0.481  Sum_probs=35.2

Q ss_pred             CCCCCCCCcccCCCccccccccccccccc-----------HHHHHHHHHHHH
Q 024587           86 THHCRSCGMCVLDMDHHCPFIGNCVGAAN-----------HRYFILFLISAV  126 (265)
Q Consensus        86 s~HC~~C~~CV~r~DHHC~wi~nCIG~~N-----------~r~F~~fl~~~~  126 (265)
                      .++|..|+..+..+-|||..-|+||-+.=           +|.+-.|+.++.
T Consensus       113 ~~~C~~C~~~rPpRs~HCsvC~~CV~rfDHHC~WvnnCVG~rNyr~F~~f~~  164 (299)
T KOG1311|consen  113 WKYCDTCQLYRPPRSSHCSVCNNCVLRFDHHCPWLNNCIGERNYRYFVLFLF  164 (299)
T ss_pred             eEEcCcCcccCCCCcccchhhcccccccCCCCCCccceECCCchHHHHHHHH
Confidence            78999999999999999999999998773           688889996555

>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=93.29  E-value=0.98  Score=36.20  Aligned_cols=60  Identities=18%  Similarity=0.352  Sum_probs=38.3

Q ss_pred             ccccccccccCCCCCCCCCCCCCCcccCCCcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 024587           70 ENYTFCHYCSKPKSPRTHHCRSCGMCVLDMDHHCPFIGNCVGAANHRYFILFLISAVVSTIYVAIMSVTAG  140 (265)
Q Consensus        70 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~wi~nCIG~~N~r~F~~fl~~~~l~~~~~~~~~~~~~  140 (265)
                      ++.++|+.|+.-...+-|||..-+.||.+..|           +..-.|+.+..-..+..++.....+...
T Consensus        60 ~Rs~HC~~C~~CV~~~DHHC~w~~~cIG~~N~-----------~~F~~fl~~~~~~~~~~~~~~~~~~~~~  119 (174)
T PF01529_consen   60 PRSHHCRVCNRCVLRFDHHCPWLGNCIGRRNH-----------RYFLLFLLYLCLYCLYFFILSLYYLVRY  119 (174)
T ss_pred             CcceeccccccccccccccchhhccccccccH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45677777777777777777777777777666           3455666665555555555444444433

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the DHHC-type zinc finger domain, which is also known as NEW1 []. The DHHC Zn-finger was first isolated in the Drosophila putative transcription factor DNZ1 and was named after a conserved sequence motif []. This domain has palmitoyltransferase activity; this post-translational modification attaches the C16 saturated fatty acid palmitate via a thioester linkage, predominantly to cysteine residues []. This domain is found in the DHHC proteins which are palmitoyl transferases []; the DHHC motif is found within a cysteine-rich domain which is thought to contain the catalytic site. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding

>PF13240 zinc_ribbon_2: zinc-ribbon domain

Probab=93.22  E-value=0.053  Score=28.67  Aligned_cols=21  Identities=24%  Similarity=0.830  Sum_probs=18.9

Q ss_pred             ccccccCCCCCCCCCCCCCCc
Q 024587           74 FCHYCSKPKSPRTHHCRSCGM   94 (265)
Q Consensus        74 ~C~~C~~~kP~Rs~HC~~C~~   94 (265)
                      +|++|....++.++.|+.|+.
T Consensus         1 ~Cp~CG~~~~~~~~fC~~CG~   21 (23)
T PF13240_consen    1 YCPNCGAEIEDDAKFCPNCGT   21 (23)
T ss_pred             CCcccCCCCCCcCcchhhhCC
Confidence            699999999999999999985

>PF13248 zf-ribbon_3: zinc-ribbon domain

Probab=90.41  E-value=0.16  Score=27.56  Aligned_cols=22  Identities=32%  Similarity=0.940  Sum_probs=19.4

Q ss_pred             cccccccCCCCCCCCCCCCCCc
Q 024587           73 TFCHYCSKPKSPRTHHCRSCGM   94 (265)
Q Consensus        73 ~~C~~C~~~kP~Rs~HC~~C~~   94 (265)
                      ++|+.|....++.++.|+.|+.
T Consensus         3 ~~Cp~Cg~~~~~~~~fC~~CG~   24 (26)
T PF13248_consen    3 MFCPNCGAEIDPDAKFCPNCGA   24 (26)
T ss_pred             CCCcccCCcCCcccccChhhCC
Confidence            6899999988999999999875

>PRK04136 rpl40e 50S ribosomal protein L40e; Provisional

Probab=89.88  E-value=0.22  Score=31.15  Aligned_cols=28  Identities=32%  Similarity=0.679  Sum_probs=23.7

Q ss_pred             cccccccccCCCCCCCCCCCCCCcccCC
Q 024587           71 NYTFCHYCSKPKSPRTHHCRSCGMCVLD   98 (265)
Q Consensus        71 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~r   98 (265)
                      ....|..|..+-|+|+..|+.|+.=-+|
T Consensus        13 ~k~ICrkC~ARnp~~A~~CRKCg~~~LR   40 (48)
T PRK04136         13 NKKICMRCNARNPWRATKCRKCGYKNLR   40 (48)
T ss_pred             cccchhcccCCCCccccccccCCCCCcC
Confidence            4689999999999999999999874333

>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only]

Probab=86.52  E-value=7.1  Score=34.72  Aligned_cols=49  Identities=24%  Similarity=0.527  Sum_probs=38.2

Q ss_pred             CCCCCCCCCcccCCCcccccccccccccc-----------cHHHHHHHHHHHHHHHHHHH
Q 024587           85 RTHHCRSCGMCVLDMDHHCPFIGNCVGAA-----------NHRYFILFLISAVVSTIYVA  133 (265)
Q Consensus        85 Rs~HC~~C~~CV~r~DHHC~wi~nCIG~~-----------N~r~F~~fl~~~~l~~~~~~  133 (265)
                      +.+.|.+|+.-...+-|||.=-+.||.+.           +.+.+=.|+.++.-+.++..
T Consensus       108 ~~R~C~kC~~iKPdRaHHCsvC~rCvLKmDHHCpWi~nCVgf~NyKfF~lfl~y~~l~~~  167 (307)
T KOG1315|consen  108 AVRYCDKCKCIKPDRAHHCSVCNRCVLKMDHHCPWINNCVGFRNYKFFLLFLFYTNLYSI  167 (307)
T ss_pred             CceeecccccccCCccccchhhhhhhhccccCCcceeceecccchHHHHHHHHHHHHHHH
Confidence            78889999999999999999999998886           45677778777755555443

>PF12773 DZR: Double zinc ribbon

Probab=86.20  E-value=0.89  Score=28.58  Aligned_cols=36  Identities=25%  Similarity=0.636  Sum_probs=26.1

Q ss_pred             ccccccccccCCCC---CCCCCCCCCCcccCCCcccccc
Q 024587           70 ENYTFCHYCSKPKS---PRTHHCRSCGMCVLDMDHHCPF  105 (265)
Q Consensus        70 ~~~~~C~~C~~~kP---~Rs~HC~~C~~CV~r~DHHC~w  105 (265)
                      ++.++|++|....+   .....|+.|++=+...+.+|+.
T Consensus        10 ~~~~fC~~CG~~l~~~~~~~~~C~~Cg~~~~~~~~fC~~   48 (50)
T PF12773_consen   10 DDAKFCPHCGTPLPPPDQSKKICPNCGAENPPNAKFCPN   48 (50)
T ss_pred             ccccCChhhcCChhhccCCCCCCcCCcCCCcCCcCccCc
Confidence            34678888887776   3356788888877777777764

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=84.97  E-value=0.65  Score=25.27  Aligned_cols=22  Identities=23%  Similarity=0.667  Sum_probs=19.4

Q ss_pred             cccccccCCCCCCCCCCCCCCc
Q 024587           73 TFCHYCSKPKSPRTHHCRSCGM   94 (265)
Q Consensus        73 ~~C~~C~~~kP~Rs~HC~~C~~   94 (265)
                      +.|+.|....|.-++-|..||.
T Consensus         1 K~CP~C~~~V~~~~~~Cp~CG~   22 (26)
T PF10571_consen    1 KTCPECGAEVPESAKFCPHCGY   22 (26)
T ss_pred             CcCCCCcCCchhhcCcCCCCCC
Confidence            4699999999999999998875

Several members are annotated as putative helicases.

>PF06906 DUF1272: Protein of unknown function (DUF1272); InterPro: IPR010696 This family consists of several hypothetical bacterial proteins of around 80 residues in length

Probab=82.87  E-value=0.61  Score=30.16  Aligned_cols=38  Identities=34%  Similarity=0.838  Sum_probs=30.5

Q ss_pred             ccccccccCCCCCCC-------CCCCCCCcccCCC-ccccccccccccc
Q 024587           72 YTFCHYCSKPKSPRT-------HHCRSCGMCVLDM-DHHCPFIGNCVGA  112 (265)
Q Consensus        72 ~~~C~~C~~~kP~Rs-------~HC~~C~~CV~r~-DHHC~wi~nCIG~  112 (265)
                      ..-|..|+..-|+-|       +-|..|..|+..+ +++||   ||=|+
T Consensus         5 rpnCE~C~~dLp~~s~~A~ICSfECTFC~~C~e~~l~~~CP---NCgGe   50 (57)
T PF06906_consen    5 RPNCECCDKDLPPDSPEAYICSFECTFCADCAETMLNGVCP---NCGGE   50 (57)
T ss_pred             CCCccccCCCCCCCCCcceEEeEeCcccHHHHHHHhcCcCc---CCCCc
Confidence            345888888888776       6699999999999 99998   67664

This family contains a number of conserved cysteine residues and its function is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	265
2ayj_A	56	50S ribosomal protein L40E; Zn-binding, beta-stran	88.37
1wfl_A	74	Zinc finger protein 216; ZF-AN1 domain, zinc bindi	87.31
3j21_g	51	50S ribosomal protein L40E; archaea, archaeal, KIN	86.12

>2ayj_A 50S ribosomal protein L40E; Zn-binding, beta-strand protein, structural genomics, PSI, protein structure initiative; NMR {Sulfolobus solfataricus} SCOP: g.41.8.7

Probab=88.37  E-value=0.45  Score=29.95  Aligned_cols=29  Identities=24%  Similarity=0.464  Sum_probs=24.6

Q ss_pred             ccccccccccCCCCCCCCCCCCCCcccCC
Q 024587           70 ENYTFCHYCSKPKSPRTHHCRSCGMCVLD   98 (265)
Q Consensus        70 ~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r   98 (265)
                      .+...|..|..+-|+|+.-|+.|+.--+|
T Consensus        17 ~~k~ICrkC~ARnp~~A~~CRKCg~~~LR   45 (56)
T 2ayj_A           17 FLKKVCRKCGALNPIRATKCRRCHSTNLR   45 (56)
T ss_dssp             CCCEEETTTCCEECTTCSSCTTTCCCCEE
T ss_pred             hchhhhccccCcCCcccccccCCCCCCCC
Confidence            35689999999999999999999865444

>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1

Probab=87.31  E-value=0.92  Score=30.31  Aligned_cols=37  Identities=27%  Similarity=0.608  Sum_probs=23.5

Q ss_pred             cccccccccCCCCCCCCCCCCCCcc-----cCCCccccccccc
Q 024587           71 NYTFCHYCSKPKSPRTHHCRSCGMC-----VLDMDHHCPFIGN  108 (265)
Q Consensus        71 ~~~~C~~C~~~kP~Rs~HC~~C~~C-----V~r~DHHC~wi~n  108 (265)
                      ....|..|+.....-...|+ |+.-     -.--||.|++--.
T Consensus        24 ~~nRC~~CrKkvgL~gf~Cr-Cg~~FCs~HRy~e~H~C~fDyk   65 (74)
T 1wfl_A           24 KKNRCFMCRKKVGLTGFDCR-CGNLFCGLHRYSDKHNCPYDYK   65 (74)
T ss_dssp             CTTBCSSSCCBCGGGCEECT-TSCEECSSSCSTTTTTCCCCGG
T ss_pred             cCCcChhhCCcccccCeecC-CCCEechhcCCCccCCCcchhh
Confidence            45689999876444457777 7652     2223888887543

>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}

Probab=86.12  E-value=0.3  Score=30.30  Aligned_cols=28  Identities=25%  Similarity=0.553  Sum_probs=24.4

Q ss_pred             cccccccccCCCCCCCCCCCCCCcccCC
Q 024587           71 NYTFCHYCSKPKSPRTHHCRSCGMCVLD   98 (265)
Q Consensus        71 ~~~~C~~C~~~kP~Rs~HC~~C~~CV~r   98 (265)
                      ..+.|+.|....|+++..|+.|+.--+|
T Consensus        13 ~k~iCpkC~a~~~~gaw~CrKCG~~~lr   40 (51)
T 3j21_g           13 KKYVCLRCGATNPWGAKKCRKCGYKRLR   40 (51)
T ss_dssp             SEEECTTTCCEECTTCSSCSSSSSCCCE
T ss_pred             CCccCCCCCCcCCCCceecCCCCCcccc
Confidence            4688999999999999999999976554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	265
d2ayja1	56	Ribosomal protein L40e {Sulfolobus solfataricus [T	92.99
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	85.23

>d2ayja1 g.41.8.7 (A:1-56) Ribosomal protein L40e {Sulfolobus solfataricus [TaxId: 2287]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zn-binding ribosomal proteins
family: Ribosomal protein L40e
domain: Ribosomal protein L40e
species: Sulfolobus solfataricus [TaxId: 2287]

Probab=92.99  E-value=0.052  Score=32.49  Aligned_cols=26  Identities=23%  Similarity=0.498  Sum_probs=22.8

Q ss_pred             ccccccccccCCCCCCCCCCCCCCcc
Q 024587           70 ENYTFCHYCSKPKSPRTHHCRSCGMC   95 (265)
Q Consensus        70 ~~~~~C~~C~~~kP~Rs~HC~~C~~C   95 (265)
                      .+.+.|.+|..+-|+|+..|+.|+.=
T Consensus        17 ~~k~ICrkC~AR~p~rAt~CRKCg~~   42 (56)
T d2ayja1          17 FLKKVCRKCGALNPIRATKCRRCHST   42 (56)
T ss_dssp             CCCEEETTTCCEECTTCSSCTTTCCC
T ss_pred             hhhHHHhhccccCCccccccccCCCC
Confidence            35689999999999999999988763

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.23  E-value=0.12  Score=25.18  Aligned_cols=15  Identities=40%  Similarity=1.050  Sum_probs=12.9

Q ss_pred             CCCCCCCcccCCCcc
Q 024587           87 HHCRSCGMCVLDMDH  101 (265)
Q Consensus        87 ~HC~~C~~CV~r~DH  101 (265)
                      |.|.+|++|..|.|.
T Consensus         2 hkc~~c~kcfsrkdk   16 (26)
T d2dmda2           2 HKCEVCGKCFSRKDK   16 (26)
T ss_dssp             CCBTTTTBCCCCHHH
T ss_pred             CccchhhhHhcchhH
Confidence            779999999998774