Citrus Sinensis ID: 024643
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
No hits with e-value below 0.001 by BLAST
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 265 | ||||||
| 224073720 | 306 | predicted protein [Populus trichocarpa] | 0.909 | 0.787 | 0.749 | 2e-99 | |
| 225442154 | 303 | PREDICTED: uncharacterized protein LOC10 | 0.913 | 0.798 | 0.694 | 4e-92 | |
| 255560651 | 302 | conserved hypothetical protein [Ricinus | 0.924 | 0.811 | 0.697 | 2e-89 | |
| 356561047 | 312 | PREDICTED: uncharacterized protein LOC10 | 0.898 | 0.762 | 0.673 | 1e-86 | |
| 356522384 | 316 | PREDICTED: uncharacterized protein LOC10 | 0.905 | 0.759 | 0.637 | 5e-84 | |
| 79378061 | 312 | Rossmann-fold NAD(P)-binding domain-cont | 0.928 | 0.788 | 0.606 | 2e-80 | |
| 297842009 | 311 | hypothetical protein ARALYDRAFT_476397 [ | 0.916 | 0.781 | 0.589 | 6e-78 | |
| 51969936 | 311 | unnamed protein product [Arabidopsis tha | 0.932 | 0.794 | 0.595 | 5e-77 | |
| 79321173 | 311 | Rossmann-fold NAD(P)-binding domain-cont | 0.932 | 0.794 | 0.595 | 6e-77 | |
| 37991868 | 310 | expressed protein [Oryza sativa Japonica | 0.811 | 0.693 | 0.655 | 1e-76 |
| >gi|224073720|ref|XP_002304142.1| predicted protein [Populus trichocarpa] gi|222841574|gb|EEE79121.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 188/251 (74%), Positives = 210/251 (83%), Gaps = 10/251 (3%)
Query: 4 TAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIE 63
TA PST QTS +F SQ ++ +PS LIF + L RCSAKKKISFVDQILDYIE
Sbjct: 3 TALPSTAFCQTS-FTFPSQNPC-KVKSPS-LIFRTKSHGLIRCSAKKKISFVDQILDYIE 59
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP----EEARDAVLVTDGDSDIGQMVILSL 119
GGPKLRKWYGAPDLLPKDGS+ EDE DE P E RDAVLVTDGDS+IGQM+ILSL
Sbjct: 60 GGPKLRKWYGAPDLLPKDGSDTEDE---DELPGNALNEVRDAVLVTDGDSEIGQMIILSL 116
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVK+ R+KALVKDKR AME+FGTYVESMAGDAS+K FLK ALRGVR+IICP+EGF+SN G
Sbjct: 117 IVKKARVKALVKDKRTAMEAFGTYVESMAGDASSKPFLKKALRGVRAIICPNEGFLSNGG 176
Query: 180 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239
L+GV+HVILLSQLSVYRGSGGIQALMK NARKLAE+DES L+ASGIPYTIIR G+LQ+T
Sbjct: 177 DLQGVKHVILLSQLSVYRGSGGIQALMKNNARKLAEKDESTLVASGIPYTIIRVGMLQDT 236
Query: 240 PGGKQGFQFEE 250
PGG QGF FE+
Sbjct: 237 PGGTQGFSFEK 247
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225442154|ref|XP_002274144.1| PREDICTED: uncharacterized protein LOC100246327 [Vitis vinifera] gi|297743019|emb|CBI35886.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 175/252 (69%), Positives = 203/252 (80%), Gaps = 10/252 (3%)
Query: 1 MAGTAFPSTLVIQTSHIS-FTSQKKSFELANPSSLIFNFEKK-VLFRCSAKKKISFVDQI 58
MAG P H S F S + S + SS +F ++ L CSAKKK FVDQI
Sbjct: 1 MAGYLLPY-------HTSLFLSSQNSHRITATSSFLFKIDRPGSLVCCSAKKKAGFVDQI 53
Query: 59 LDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILS 118
LDYIEGGPKLRKWYGAPDLLPKDGS+ E++++ E EE RDAVLVTDGDS+IGQMVILS
Sbjct: 54 LDYIEGGPKLRKWYGAPDLLPKDGSSVEEDDESAEV-EEDRDAVLVTDGDSEIGQMVILS 112
Query: 119 LIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNA 178
LIVKR+RIKALVKDKR AME+FGTYVESMAGDA++K F + ALRGVR+IICP+EG ISN
Sbjct: 113 LIVKRSRIKALVKDKRAAMEAFGTYVESMAGDANDKSFQRKALRGVRTIICPNEGSISNF 172
Query: 179 GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238
GSL GVQH+ILLSQLS YRG+GGIQALM+GNARKLAE+DES++ SGIPYTIIR G+LQN
Sbjct: 173 GSLMGVQHIILLSQLSAYRGTGGIQALMQGNARKLAEKDESIVTGSGIPYTIIRAGLLQN 232
Query: 239 TPGGKQGFQFEE 250
+PGGK+GF F+E
Sbjct: 233 SPGGKEGFSFKE 244
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255560651|ref|XP_002521339.1| conserved hypothetical protein [Ricinus communis] gi|223539417|gb|EEF41007.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/251 (69%), Positives = 204/251 (81%), Gaps = 6/251 (2%)
Query: 1 MAGTAFPSTLVIQTS-HISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQIL 59
MAGT F S L+ Q+ +S+ +Q KS + S + + L CSAKKKI F+DQIL
Sbjct: 1 MAGT-FSSILLWQSCLSLSYQNQSKSLDF---SPIFHTTNNRSLVHCSAKKKIGFMDQIL 56
Query: 60 DYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVILSL 119
DYIEGGPKLRKWYGAPDLLPKDGS +DE++ E EE RDA+LVTDGDS+IGQMVILSL
Sbjct: 57 DYIEGGPKLRKWYGAPDLLPKDGSTMQDEDEFSE-EEEVRDAILVTDGDSEIGQMVILSL 115
Query: 120 IVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAG 179
IVKR ++KALVKDKR+AME+FGTYVESMAGD S+ F+K ALRGVR+IICP EGF+S+ G
Sbjct: 116 IVKRAKVKALVKDKRSAMEAFGTYVESMAGDTSSMLFIKKALRGVRAIICPKEGFLSSVG 175
Query: 180 SLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNT 239
SLKGV+HVILLSQLSVYRGS GI+A+MK NARKL EQDES L+ASGIP TIIR G+LQNT
Sbjct: 176 SLKGVKHVILLSQLSVYRGSSGIEAMMKSNARKLTEQDESALVASGIPCTIIRVGMLQNT 235
Query: 240 PGGKQGFQFEE 250
PGG QGF FE+
Sbjct: 236 PGGTQGFNFEK 246
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356561047|ref|XP_003548797.1| PREDICTED: uncharacterized protein LOC100806043 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/248 (67%), Positives = 199/248 (80%), Gaps = 10/248 (4%)
Query: 8 STLVIQTSHISFTSQKKSFELANPSSLIFNFEKKV----LFRCSAKKKISFVDQILDYIE 63
STL Q S + TSQ+ A SS FN E L C AKKK+SF++QILDYIE
Sbjct: 11 STLPFQKS-VPLTSQRSG--TAFGSSFQFNRENGTVVTPLVVCHAKKKLSFMEQILDYIE 67
Query: 64 GGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFPE-EARDAVLVTDGDSDIGQMVILSLIVK 122
GGPKLRKWYGAPD+L KDG+ ED ED++PE E RDAVLVTDGDS++GQMVILSLIVK
Sbjct: 68 GGPKLRKWYGAPDILEKDGTAIED--NEDDYPEDEVRDAVLVTDGDSEMGQMVILSLIVK 125
Query: 123 RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISNAGSLK 182
+ R+K LVKDKR A+E+FG+YVESMAGD S+K+F+K ALRGVR+IICP+EGF+S+ GSL+
Sbjct: 126 KARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFVKKALRGVRTIICPNEGFLSSVGSLQ 185
Query: 183 GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242
GVQHVI+LS+LSVY G G Q++MK NA+KLAEQDES+L SGIPYTIIRTG LQ+TPGG
Sbjct: 186 GVQHVIVLSRLSVYGGQSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGALQDTPGG 245
Query: 243 KQGFQFEE 250
KQGF F+E
Sbjct: 246 KQGFTFDE 253
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356522384|ref|XP_003529826.1| PREDICTED: uncharacterized protein LOC100801216 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 316 bits (810), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 196/254 (77%), Gaps = 14/254 (5%)
Query: 6 FPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEK----KVLFRCSAKKKISFVDQILDY 61
STL Q S + SQ+ SS +F+ E L C AKKK+SF++QILDY
Sbjct: 9 LSSTLSFQKS-VPLNSQRSGTSFG--SSFLFSRENGSVVPSLVVCHAKKKLSFMEQILDY 65
Query: 62 IEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEFP-----EEARDAVLVTDGDSDIGQMVI 116
IEGGPKLRKWYGAPD+L KDG+ ED+E D++P +E RDAVLVTDGDS+ GQMVI
Sbjct: 66 IEGGPKLRKWYGAPDILEKDGTAIEDDE--DDYPGEQIEDEVRDAVLVTDGDSETGQMVI 123
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
LSLIVK+ R+K LVKDKR A+E+FG+YVESMAGD S+K+FLK ALRGVR+IICP+EGF+S
Sbjct: 124 LSLIVKKARVKTLVKDKRVALEAFGSYVESMAGDTSDKRFLKKALRGVRTIICPNEGFLS 183
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+ GSL+GVQHVI+LSQLSVY G G Q++MK NA+KLAEQDES+L SGIPYTIIRTG L
Sbjct: 184 SVGSLQGVQHVIVLSQLSVYGGKSGFQSMMKSNAKKLAEQDESVLKTSGIPYTIIRTGAL 243
Query: 237 QNTPGGKQGFQFEE 250
+ PGGK+GF F+E
Sbjct: 244 LDAPGGKRGFTFDE 257
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79378061|ref|NP_177408.3| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|44917555|gb|AAS49102.1| At1g72640 [Arabidopsis thaliana] gi|332197230|gb|AEE35351.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/254 (60%), Positives = 189/254 (74%), Gaps = 8/254 (3%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEED------EEKEDEFPEEARDAVLVTDGDSDIGQM 114
YIEGGPKLRKWYGAP+L PKDGS D EEKED+ E +D V VTDGDSD+GQM
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGE-KDVVFVTDGDSDLGQM 118
Query: 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174
+IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF
Sbjct: 119 IILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGF 178
Query: 175 ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 179 LSIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTG 238
Query: 235 VLQNTPGGKQGFQF 248
L+N+PGG QGF F
Sbjct: 239 KLENSPGGSQGFNF 252
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297842009|ref|XP_002888886.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] gi|297334727|gb|EFH65145.1| hypothetical protein ARALYDRAFT_476397 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 296 bits (758), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 151/256 (58%), Positives = 188/256 (73%), Gaps = 13/256 (5%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F S + E + + K+ RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFCSSNQVSE--TKCRIGISSGKRCRVRCLAKKKISFVDQILD 58
Query: 61 YIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF-PEEARD-------AVLVTDGDSDIG 112
YIEGGPKLRKWYGAP+L PKDGS D+ DEF EEA+D V VTDGDSD+G
Sbjct: 59 YIEGGPKLRKWYGAPELRPKDGSLSGDD---DEFEAEEAKDDLDGENDVVFVTDGDSDLG 115
Query: 113 QMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172
QM+IL LIVK TR+KALVKDKR A+E+FG+YVE +GDAS+++FLK A +GV ++I P+E
Sbjct: 116 QMIILQLIVKGTRVKALVKDKRKALEAFGSYVELTSGDASDERFLKKAFKGVGAVISPTE 175
Query: 173 GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIR 232
GF+ N S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ +++S +PYTIIR
Sbjct: 176 GFLPNVKSFRGVKHAVLLSQLSVYESSGGIQAMMNNKAKKLAEQDENAVISSNVPYTIIR 235
Query: 233 TGVLQNTPGGKQGFQF 248
TG L+N+PGG QGF F
Sbjct: 236 TGKLENSPGGNQGFNF 251
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|51969936|dbj|BAD43660.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 293 bits (750), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 191/252 (75%), Gaps = 5/252 (1%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG L
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGKL 239
Query: 237 QNTPGGKQGFQF 248
+N+PGG QGF F
Sbjct: 240 ENSPGGSQGFNF 251
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|79321173|ref|NP_001031269.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|332197231|gb|AEE35352.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 293 bits (749), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 150/252 (59%), Positives = 191/252 (75%), Gaps = 5/252 (1%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS----NEEDEEKEDEFPEEARDAVLVTDGDSDIGQMVI 116
YIEGGPKLRKWYGAP+L PKDGS ++E EE++++ + +D V VTDGDSD+GQM+I
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEEEKEDDLDGEKDVVFVTDGDSDLGQMII 119
Query: 117 LSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFIS 176
L LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+S
Sbjct: 120 LQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFLS 179
Query: 177 NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG L
Sbjct: 180 IVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGKL 239
Query: 237 QNTPGGKQGFQF 248
+N+PGG QGF F
Sbjct: 240 ENSPGGSQGFNF 251
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|37991868|gb|AAR06314.1| expressed protein [Oryza sativa Japonica Group] gi|108708765|gb|ABF96560.1| expressed protein [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 143/218 (65%), Positives = 175/218 (80%), Gaps = 3/218 (1%)
Query: 35 IFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEEKEDEF 94
+FN V+ R +K + SF D+ILDYIEGGPKLR+WYGAPDLLPKDGS E+ E++ E
Sbjct: 38 LFNAATAVVVRSRSKDEASFTDRILDYIEGGPKLRRWYGAPDLLPKDGSAEDGEDEPSEI 97
Query: 95 P-EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153
EE RDAVLVT+GDS+IGQMVILSLI+KR RIKALVKD+R+ E+FGTYVE M G+ +
Sbjct: 98 DIEEPRDAVLVTNGDSEIGQMVILSLILKRARIKALVKDRRSTEEAFGTYVECMVGNMED 157
Query: 154 KKFLKTALRGVRSIICPSE-GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212
K F K ALRGVR+IICP++ GF S+ LKGVQH++LLSQLSVYRGSGG+QA+M RK
Sbjct: 158 KSFTKKALRGVRAIICPADDGFFSDL-DLKGVQHIVLLSQLSVYRGSGGLQAIMNSKLRK 216
Query: 213 LAEQDESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEE 250
LAE+DE +++ASGIP TIIRTG +Q+TPGG +GF F E
Sbjct: 217 LAERDEEVVLASGIPSTIIRTGSMQSTPGGDRGFDFTE 254
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 265 | ||||||
| TAIR|locus:2030270 | 312 | AT1G72640 [Arabidopsis thalian | 0.932 | 0.791 | 0.581 | 5.3e-72 |
| TAIR|locus:2030270 AT1G72640 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 147/253 (58%), Positives = 182/253 (71%)
Query: 1 MAGTAFPSTLVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILD 60
MAGT+ PS L+ Q + F+S + E AN + K+ L RC AKKKISFVDQILD
Sbjct: 1 MAGTSLPSCLLSQGPSLLFSSSNQDSE-ANKCRIGITSGKRCLVRCFAKKKISFVDQILD 59
Query: 61 YIEGGPKLRKWYGAPDLLPKDGS-----NXXXXXXXXXXXXXARDAVLVTDGDSDIGQMV 115
YIEGGPKLRKWYGAP+L PKDGS + +D V VTDGDSD+GQM+
Sbjct: 60 YIEGGPKLRKWYGAPELRPKDGSLSGDDDEFEAEEKEDDLDGEKDVVFVTDGDSDLGQMI 119
Query: 116 ILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175
IL LIVK TR+KALVKDKR A+E+FG+YVE GDAS+++FLK A +GV ++I P+EGF+
Sbjct: 120 ILQLIVKGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLKKAFKGVGAVISPTEGFL 179
Query: 176 SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235
S S +GV+H +LLSQLSVY SGGIQA+M A+KLAEQDE+ ++S +PYTIIRTG
Sbjct: 180 SIVKSFRGVKHAVLLSQLSVYESSGGIQAMMNSKAKKLAEQDENAAISSNVPYTIIRTGK 239
Query: 236 LQNTPGGKQGFQF 248
L+N+PGG QGF F
Sbjct: 240 LENSPGGSQGFNF 252
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.380 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 265 252 0.00082 114 3 11 22 0.44 33
32 0.47 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 588 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.77u 0.21s 18.98t Elapsed: 00:00:01
Total cpu time: 18.77u 0.21s 18.98t Elapsed: 00:00:01
Start: Fri May 10 17:17:04 2013 End: Fri May 10 17:17:05 2013
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | gw1.III.2689.1 | hypothetical protein (262 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 265 | |||
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 2e-12 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-08 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 2e-06 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 7e-06 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 8e-06 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-04 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
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Score = 63.5 bits (155), Expect = 2e-12
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+ V G+ ++ L+ + ++ AL ++ A T V+ D + L AL
Sbjct: 1 IAVIGATGKTGRRLVKELLARGHQVTALSRNPSKAPAPGVTPVQ---KDLFDLADLAEAL 57
Query: 162 RGVRSIIC--PSEGF-------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--- 209
GV +++ + + +A + GV+ ++++S +YR G L
Sbjct: 58 AGVDAVVDAFGARPDDSDGVKHLLDAAARAGVRRIVVVSAAGLYRDEPGTFRLDDAPLFP 117
Query: 210 --ARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK 243
AR A +E +L ASG+ +TI+R G L + G
Sbjct: 118 PYARAKAAAEE-LLRASGLDWTIVRPGALFDEEGET 152
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Length = 182 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
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Score = 52.6 bits (127), Expect = 2e-08
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
VLV +G+ V+ L+ + +++ALV+D A + E + GD ++ + L AL
Sbjct: 2 VLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLAAAL 61
Query: 162 RGVRSIIC-----PSEG----FISNAGSLK--------GVQHVILLSQLSVYRGSGGIQA 204
G+ ++I G + G++ GV+ +L+S + + S ++A
Sbjct: 62 EGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAGVKRFVLVSSIGADKPSHPLEA 121
Query: 205 LMKG-NARKLAEQDESMLMASGIPYTIIRTGVLQNTPGGK 243
L +A++ AE L ASG+ YTI+R G L + P G
Sbjct: 122 LGPYLDAKRKAED---YLRASGLDYTIVRPGGLTDDPAGT 158
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This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
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Score = 47.6 bits (113), Expect = 2e-06
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 23/147 (15%)
Query: 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160
+LVT +G V+ L+ + ++A V++ A G VE + GD + K L
Sbjct: 2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGG-VEVVLGDLRDPKSLVAG 60
Query: 161 LRGV------RSIICPSEGFISNAGSL---------KGVQHVILLSQLSVYRGSGGIQAL 205
+GV ++ S+ F + + GV+H + LS L S A
Sbjct: 61 AKGVDGVLLISGLLDGSDAFRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAASPSALAR 120
Query: 206 MKGNARKLAEQDESMLMASGIPYTIIR 232
K E+ L +SGIPYT +R
Sbjct: 121 AKAAV-------EAALRSSGIPYTTLR 140
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Length = 275 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
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Score = 45.7 bits (109), Expect = 7e-06
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN----AMESFGTYVESMAGDASNKKF 156
+LV G V+ +L+ +++AL +D + A+ + G VE + GD + +
Sbjct: 1 ILVFGATGKQGGSVVRALLKDPGFKVRALTRDPSSPAAKALAAPG--VEVVQGDLDDPES 58
Query: 157 LKTALRGVRSIIC---PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGI- 202
L+ AL+GV + E +A GVQH + S V + + +
Sbjct: 59 LEAALKGVYGVFLVTDFWEAGGEDEIAQGKNVVDAAKRAGVQHFVFSSVPDVEKLTLAVP 118
Query: 203 QALMKGNARKLAEQDESMLMASGIPYTIIRTGV-LQN 238
K E + ASG+P TI+R ++N
Sbjct: 119 HFDSKAEV-------EEYIRASGLPATILRPAFFMEN 148
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NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 8e-06
Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR 162
LVT +G V+ L+ K + ALV++ A VE GD + + L+ A
Sbjct: 2 LVTGATGKLGTAVVELLLAKVASVVALVRNPEKAKAFAADGVEVRQGDYDDPETLERAFE 61
Query: 163 GVRS--IICPS---------EGFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211
GV +I PS + FI +A GV+H++ LS SG + AR
Sbjct: 62 GVDRLLLISPSDLEDRIQQHKNFI-DAAKQAGVKHIVYLS------ASGADEDSPFLLAR 114
Query: 212 KLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
E L ASGIPYTI+R G + N
Sbjct: 115 DHG-ATEKYLEASGIPYTILRPGWFMDNLLE 144
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TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 1e-04
Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 17/152 (11%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+L+ IG+ + L+ + + LV++ + + V + GD + L A+
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60
Query: 162 RGVRSIIC--------------PSEGFISNAGSLK--GVQHVILLSQLSVYRGSGGIQA- 204
+GV +I EG + + K GV+H I +S L Y
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAGVKHFIFISSLGAYGDLHEETEP 120
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236
+ + E++L + +PYTI+R GV+
Sbjct: 121 SPSSPYLAVKAKTEAVLREASLPYTIVRPGVI 152
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Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 265 | |||
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.86 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.83 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.78 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.77 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.75 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.73 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.73 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.73 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.73 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.73 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.71 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.7 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.7 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.69 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.69 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.67 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.67 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.67 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.67 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.66 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.65 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.65 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.64 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.63 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.63 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.63 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.63 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.63 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.62 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.62 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.62 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.62 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.61 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.61 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.61 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.6 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.6 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.59 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.57 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.57 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.57 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.57 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.56 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.56 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.56 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.56 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.56 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.56 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.55 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.55 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.54 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.54 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.54 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.54 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.53 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.53 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.53 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.53 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.53 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.53 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.53 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.53 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.52 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.51 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.51 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.51 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.51 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.51 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.51 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.5 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.5 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.5 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.5 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.5 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.5 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.5 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.5 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.49 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.49 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.49 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.49 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.49 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.49 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.48 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.48 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.48 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.48 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.48 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.48 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.48 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.47 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.47 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.47 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.47 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.46 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.46 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.46 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.45 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.45 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.45 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.45 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.44 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.44 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.44 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.44 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.44 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.44 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.44 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.43 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.43 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.43 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.43 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.43 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.43 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.43 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.42 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.42 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.42 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.42 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.42 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.42 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.42 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.41 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.41 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.41 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.41 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.41 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.4 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.4 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.4 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.4 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.4 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.39 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.39 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.39 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.39 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.38 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.38 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.38 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.38 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.37 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.37 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.37 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.37 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.37 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.36 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.36 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.36 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.36 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.36 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.35 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.35 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.35 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.35 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.35 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.35 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.34 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.34 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.33 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.33 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.33 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.33 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.32 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.32 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.32 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.32 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.31 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.31 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.31 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.31 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.3 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.3 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.3 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.3 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.3 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.3 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.3 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.3 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.3 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.29 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.28 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.28 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.28 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.27 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.27 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.27 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.26 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.25 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.24 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.24 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.23 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.22 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.22 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.22 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.21 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.2 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.19 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.19 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.18 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.16 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.16 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.16 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.15 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.15 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.14 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.14 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.14 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.13 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.13 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.13 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.12 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.12 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.12 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.12 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.1 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.1 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.1 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.07 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.07 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.06 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.06 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.05 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.05 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.04 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.0 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 98.99 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 98.98 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.98 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.97 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 98.96 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.96 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 98.94 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 98.93 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 98.89 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.87 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 98.87 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 98.86 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 98.85 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 98.82 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 98.82 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.76 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 98.71 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.64 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.62 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 98.6 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 98.59 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.59 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.47 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.44 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.36 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.35 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.33 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 98.33 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.32 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.22 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.12 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.1 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 98.03 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 98.0 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 97.98 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 97.97 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.96 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.94 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 97.94 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 97.91 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.9 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.76 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.75 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 97.75 | |
| PLN00106 | 323 | malate dehydrogenase | 97.69 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.69 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 97.68 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.63 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 97.62 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.61 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.6 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.57 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 97.56 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.54 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.53 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.52 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.44 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.44 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.43 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.38 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.35 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 97.3 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.29 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.29 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.27 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.21 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.17 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.15 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.14 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 97.13 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.12 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 97.11 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.08 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.06 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.04 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.01 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 96.97 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.97 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.96 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.96 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.93 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.9 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.87 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 96.87 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.86 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 96.84 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.84 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.81 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 96.81 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.81 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.8 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 96.79 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.78 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.78 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.78 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.76 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 96.76 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.71 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.68 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.65 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.63 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 96.63 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.62 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.62 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 96.58 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.57 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.56 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.55 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.54 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.53 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 96.53 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.53 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 96.52 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.51 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.51 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.49 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 96.49 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.46 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.46 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.44 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.43 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.41 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.41 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.41 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 96.41 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.39 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.37 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 96.37 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.36 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.35 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.34 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.34 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.32 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.31 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.31 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.3 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.3 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.3 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.3 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.27 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.26 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.25 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.24 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.22 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.21 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.21 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.19 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.19 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.17 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.17 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.16 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.16 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.15 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.15 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.14 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.12 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.12 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.11 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.11 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 96.1 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.09 | |
| TIGR01161 | 352 | purK phosphoribosylaminoimidazole carboxylase, Pur | 96.09 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 96.08 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 96.08 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 96.07 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 96.07 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.05 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.04 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.04 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 96.04 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.04 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.03 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 96.02 | |
| PRK15059 | 292 | tartronate semialdehyde reductase; Provisional | 96.0 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 95.99 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.99 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 95.98 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 95.96 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 95.95 | |
| TIGR01692 | 288 | HIBADH 3-hydroxyisobutyrate dehydrogenase. This en | 95.93 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 95.91 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 95.86 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.85 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.85 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 95.83 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 95.82 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 95.8 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 95.78 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 95.76 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 95.76 | |
| PLN02494 | 477 | adenosylhomocysteinase | 95.76 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.74 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 95.74 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 95.7 | |
| PLN02928 | 347 | oxidoreductase family protein | 95.68 | |
| PLN02350 | 493 | phosphogluconate dehydrogenase (decarboxylating) | 95.65 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.64 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.62 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 95.62 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 95.62 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.59 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 95.58 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.56 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 95.55 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.52 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 95.52 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 95.52 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 95.5 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 95.48 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 95.48 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.45 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.42 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 95.42 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.42 | |
| COG1893 | 307 | ApbA Ketopantoate reductase [Coenzyme metabolism] | 95.42 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 95.38 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 95.37 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 95.37 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 95.35 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 95.35 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.34 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.33 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.33 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.32 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 95.3 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 95.29 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 95.29 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 95.29 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 95.23 | |
| cd05212 | 140 | NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom | 95.23 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 95.22 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 95.22 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.21 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 95.2 |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-20 Score=156.05 Aligned_cols=139 Identities=27% Similarity=0.401 Sum_probs=117.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc---------
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--------- 172 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--------- 172 (265)
|+|+||||++|+.++++|+++|++|++++|++++... ..+++++++|+.|++++.++++++|+||++.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccceeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence 7999999999999999999999999999999988776 78899999999999999999999999998822
Q ss_pred hHHHHHHHhCCCCEEEEecccccccCCCCccc----ccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccCCCCC
Q 024643 173 GFISNAGSLKGVQHVILLSQLSVYRGSGGIQA----LMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (265)
Q Consensus 173 ~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~----~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~~~~~ 242 (265)
..+.+++++.+++|+|++|+.+++........ .....++..+...|+.+++++++|+++||+++.+.+..
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp~~~~~~~~~ 152 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRPGWIYGNPSR 152 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEESEEEBTTSS
T ss_pred ccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEECcEeEeCCCc
Confidence 23566788899999999999999876544211 01123456778889999999999999999998777644
|
... |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=163.81 Aligned_cols=131 Identities=25% Similarity=0.269 Sum_probs=107.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------- 172 (265)
|+|+||||||+||++++++|+++||+|++++|+.++...+...+++++.+|+.|++++.++++++|+||++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6899999999999999999999999999999997665444445799999999999999999999999998711
Q ss_pred ----------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 173 ----------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 173 ----------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.++++++|++|||++||.++.... .......|.++|+++++++++||++||+.+.
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~-------~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~ 148 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP-------YIPLMKLKSDIEQKLKKSGIPYTIFRLAGFF 148 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC-------CChHHHHHHHHHHHHHHcCCCeEEEeecHHh
Confidence 124567888999999999997543211 1122347888999999999999999999643
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=146.36 Aligned_cols=147 Identities=26% Similarity=0.346 Sum_probs=110.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCC-HHHHHHHH-cCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASN-KKFLKTAL-RGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d-~~~l~~~~-~~~d~vi~~ 170 (265)
....+|+|+||||+|+||+.++++|+++|++|+++.|+.++..... ..+++++++|+.| .+.+.+.+ .++|+||++
T Consensus 13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~ 92 (251)
T PLN00141 13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICA 92 (251)
T ss_pred ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEEC
Confidence 3445789999999999999999999999999999999987654332 2368999999998 56777788 689999977
Q ss_pred Cc------------------hHHHHHHHhCCCCEEEEecccccccCCCC--ccc-ccchh----HHHHHHHHHHHHHhCC
Q 024643 171 SE------------------GFISNAGSLKGVQHVILLSQLSVYRGSGG--IQA-LMKGN----ARKLAEQDESMLMASG 225 (265)
Q Consensus 171 ~~------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~~~-~~~~~----~~~~k~~~E~~l~~~g 225 (265)
.+ ..+.+++++.+++|||++||.++|....+ ..+ +...+ .+..|..+|+++++++
T Consensus 93 ~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g 172 (251)
T PLN00141 93 TGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG 172 (251)
T ss_pred CCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 21 12345577788999999999988753211 111 11111 1236778899999999
Q ss_pred CCEEEEeCCCccCCCC
Q 024643 226 IPYTIIRTGVLQNTPG 241 (265)
Q Consensus 226 l~~tivRPg~l~~~~~ 241 (265)
+++++||||++.+.+.
T Consensus 173 i~~~iirpg~~~~~~~ 188 (251)
T PLN00141 173 INYTIVRPGGLTNDPP 188 (251)
T ss_pred CcEEEEECCCccCCCC
Confidence 9999999999876543
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=159.62 Aligned_cols=142 Identities=23% Similarity=0.316 Sum_probs=109.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---------------CCccEEeeeCCCCHHHHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------------GTYVESMAGDASNKKFLKTA 160 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---------------~~~v~~i~~D~~d~~~l~~~ 160 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.+++..+. ..+++++.+|+.|.+++.++
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 345678999999999999999999999999999999987654321 12478999999999999999
Q ss_pred HcCCCEEEEcCch--------------------HHHHHHHhCCCCEEEEecccccccCCCCcccc-cchhHHHHHHHHHH
Q 024643 161 LRGVRSIICPSEG--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQAL-MKGNARKLAEQDES 219 (265)
Q Consensus 161 ~~~~d~vi~~~~~--------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~-~~~~~~~~k~~~E~ 219 (265)
+.++|+||++.+. .+.++++..+++|||++||.++.........+ ....++.+|..+|+
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~ 236 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE 236 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence 9999999987210 13345667889999999998764221111111 11234568899999
Q ss_pred HHHhCCCCEEEEeCCCcc
Q 024643 220 MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l~~~gl~~tivRPg~l~ 237 (265)
++..+|++|++||||++.
T Consensus 237 ~L~~sGIrvTIVRPG~L~ 254 (576)
T PLN03209 237 ALIASGLPYTIVRPGGME 254 (576)
T ss_pred HHHHcCCCEEEEECCeec
Confidence 999999999999999974
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.7e-18 Score=145.89 Aligned_cols=134 Identities=28% Similarity=0.380 Sum_probs=103.7
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc----h--
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G-- 173 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----~-- 173 (265)
|+|+||||.+|+.+++.|++.+++|++++|+..+ ...+...+++++.+|+.|.+++.++++++|.||++.+ .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~ 80 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL 80 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence 7999999999999999999999999999999853 3444556789999999999999999999999998722 1
Q ss_pred ----HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 174 ----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 174 ----~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+.++++++||+|||+.|....+.......+ ....+..|..+|+++++.+++||+||||+|+
T Consensus 81 ~~~~~li~Aa~~agVk~~v~ss~~~~~~~~~~~~p--~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~ 146 (233)
T PF05368_consen 81 EQQKNLIDAAKAAGVKHFVPSSFGADYDESSGSEP--EIPHFDQKAEIEEYLRESGIPYTIIRPGFFM 146 (233)
T ss_dssp HHHHHHHHHHHHHT-SEEEESEESSGTTTTTTSTT--HHHHHHHHHHHHHHHHHCTSEBEEEEE-EEH
T ss_pred hhhhhHHHhhhccccceEEEEEecccccccccccc--cchhhhhhhhhhhhhhhccccceeccccchh
Confidence 2677889999999998776555532211111 1233457889999999999999999999854
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.4e-17 Score=146.49 Aligned_cols=135 Identities=19% Similarity=0.274 Sum_probs=101.4
Q ss_pred EEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchh--hhcCCcc-EEeeeCCCCHHHHHHHHcCCCEEEEcCc-----
Q 024643 103 LVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (265)
Q Consensus 103 lVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~--~~~~~~v-~~i~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (265)
|||||+||+|++|+++|+++| ++|+++++...... .....+. +++.+|++|++++.++++++|+|||+..
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~ 80 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW 80 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence 699999999999999999999 79999998765432 2222233 4999999999999999999999998711
Q ss_pred h----------------HHHHHHHhCCCCEEEEecccccccCC---CCc------ccc---cchhHHHHHHHHHHHHHh-
Q 024643 173 G----------------FISNAGSLKGVQHVILLSQLSVYRGS---GGI------QAL---MKGNARKLAEQDESMLMA- 223 (265)
Q Consensus 173 ~----------------~~~~aa~~~gv~r~V~iSS~~v~~~~---~~~------~~~---~~~~~~~~k~~~E~~l~~- 223 (265)
. .+.++|++.+++||||+||.+++... .+. .++ ....+..+|..+|+++.+
T Consensus 81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a 160 (280)
T PF01073_consen 81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA 160 (280)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence 0 15567889999999999999986541 111 111 111233589999998765
Q ss_pred C--------CCCEEEEeCCCcc
Q 024643 224 S--------GIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ~--------gl~~tivRPg~l~ 237 (265)
. .+.+++|||..+.
T Consensus 161 ~~~~~~~g~~l~t~~lRP~~Iy 182 (280)
T PF01073_consen 161 NGSELKNGGRLRTCALRPAGIY 182 (280)
T ss_pred cccccccccceeEEEEeccEEe
Confidence 2 2889999999753
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.5e-17 Score=145.07 Aligned_cols=140 Identities=15% Similarity=0.174 Sum_probs=104.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch------hhhc--CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MESF--GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~------~~~~--~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++|+|||||||||++++++|+++||.|++.+|+++.. ..+. +...+.+.+|+.|++++.++++|||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 578999999999999999999999999999999998762 2222 34589999999999999999999999999
Q ss_pred cC-c----------hH----------HHHHHHhCC-CCEEEEecccccccCCCC---cc------cccc-------hhHH
Q 024643 170 PS-E----------GF----------ISNAGSLKG-VQHVILLSQLSVYRGSGG---IQ------ALMK-------GNAR 211 (265)
Q Consensus 170 ~~-~----------~~----------~~~aa~~~g-v~r~V~iSS~~v~~~~~~---~~------~~~~-------~~~~ 211 (265)
+. + .. +.++|++.. |+||||+||.++-....+ .+ .+.. ..+|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 71 1 11 344566555 999999999887543311 10 0000 0122
Q ss_pred -HHHHHHHHHH----HhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESML----MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l----~~~gl~~tivRPg~l~ 237 (265)
..|..+|+.. .+.+++.+.|.|+.+.
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~ 195 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVF 195 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceE
Confidence 3666677654 3478999999999863
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1e-16 Score=141.61 Aligned_cols=138 Identities=18% Similarity=0.176 Sum_probs=107.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHc--CCCEEEEcCch---
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR--GVRSIICPSEG--- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~~--- 173 (265)
|+||||||.|+||++.+.+|++.|++|++++.-.....+... ..++++++|+.|.+.+.++|+ .+|+|||..+.
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~V 80 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISV 80 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccccc
Confidence 689999999999999999999999999999875433222222 226899999999999999996 68999987210
Q ss_pred -------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHHh----C
Q 024643 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLMA----S 224 (265)
Q Consensus 174 -------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~~----~ 224 (265)
.+.++|++.|+++|||.||+.+|+.+... .+..+.++| .+|.+.|+.+++ .
T Consensus 81 gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~ 160 (329)
T COG1087 81 GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN 160 (329)
T ss_pred chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC
Confidence 15677999999999999999999875331 122233334 488899998865 7
Q ss_pred CCCEEEEeCCCcc
Q 024643 225 GIPYTIIRTGVLQ 237 (265)
Q Consensus 225 gl~~tivRPg~l~ 237 (265)
+++++++|.....
T Consensus 161 ~~~~v~LRYFN~a 173 (329)
T COG1087 161 PFKVVILRYFNVA 173 (329)
T ss_pred CCcEEEEEecccc
Confidence 8999999987643
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.1e-17 Score=146.14 Aligned_cols=123 Identities=15% Similarity=0.198 Sum_probs=98.8
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH------cC-CCEEEEcCc-
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL------RG-VRSIICPSE- 172 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~------~~-~d~vi~~~~- 172 (265)
+|+||||||++|++++++|+++|++|++++|++++.. ..+++.+.+|+.|++++.+++ ++ +|.++++.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~ 77 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP 77 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence 4899999999999999999999999999999987653 246778899999999999999 67 999987622
Q ss_pred --------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhC-CCCEEEEeCCCccC
Q 024643 173 --------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMAS-GIPYTIIRTGVLQN 238 (265)
Q Consensus 173 --------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~-gl~~tivRPg~l~~ 238 (265)
..+.++|+++|++|||++||.+++.... .+...|+++++. |++||++||+++.+
T Consensus 78 ~~~~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~------------~~~~~~~~l~~~~gi~~tilRp~~f~~ 140 (285)
T TIGR03649 78 IPDLAPPMIKFIDFARSKGVRRFVLLSASIIEKGGP------------AMGQVHAHLDSLGGVEYTVLRPTWFME 140 (285)
T ss_pred CCChhHHHHHHHHHHHHcCCCEEEEeeccccCCCCc------------hHHHHHHHHHhccCCCEEEEeccHHhh
Confidence 1255678899999999999876542211 223457788775 99999999998654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.4e-17 Score=147.78 Aligned_cols=144 Identities=12% Similarity=-0.040 Sum_probs=106.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh----h-------cCCccEEeeeCCCCHHHHHHHHcC
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S-------FGTYVESMAGDASNKKFLKTALRG 163 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~-------~~~~v~~i~~D~~d~~~l~~~~~~ 163 (265)
-...+|+|+|||||||||++|+++|+++|++|++++|....... . ....++++.+|+.|.+.+.+++++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 34556899999999999999999999999999999986532111 1 013578899999999999999999
Q ss_pred CCEEEEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHH
Q 024643 164 VRSIICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAE 215 (265)
Q Consensus 164 ~d~vi~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~ 215 (265)
+|+|||+.. . .+.++|++.++++|||+||..+|+..... .+..+...| ..|.
T Consensus 91 ~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~ 170 (348)
T PRK15181 91 VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKY 170 (348)
T ss_pred CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHH
Confidence 999998721 0 13455778899999999999988643211 011122223 4777
Q ss_pred HHHHHHH----hCCCCEEEEeCCCccC
Q 024643 216 QDESMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 216 ~~E~~l~----~~gl~~tivRPg~l~~ 238 (265)
.+|++++ +.+++++++||+.+..
T Consensus 171 ~~e~~~~~~~~~~~~~~~~lR~~~vyG 197 (348)
T PRK15181 171 VNELYADVFARSYEFNAIGLRYFNVFG 197 (348)
T ss_pred HHHHHHHHHHHHhCCCEEEEEecceeC
Confidence 7777654 3689999999997643
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=146.64 Aligned_cols=134 Identities=24% Similarity=0.299 Sum_probs=105.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh------hh--cCCccEEeeeCCCCHHHHHHHHc----C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES--FGTYVESMAGDASNKKFLKTALR----G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~------~~--~~~~v~~i~~D~~d~~~l~~~~~----~ 163 (265)
...+++|+||||||+||++++++|+++|++|++++|+..+.. .. ...+++++.+|++|++++.++++ +
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~ 136 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP 136 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence 445679999999999999999999999999999999875432 11 23478999999999999999997 5
Q ss_pred CCEEEEcCc----h-------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHh--C
Q 024643 164 VRSIICPSE----G-------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--S 224 (265)
Q Consensus 164 ~d~vi~~~~----~-------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~--~ 224 (265)
+|+||++.. . .+.+++++.|++|||++||.+++.+. ..+...|...|++++. .
T Consensus 137 ~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~~p~--------~~~~~sK~~~E~~l~~~~~ 208 (390)
T PLN02657 137 VDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPL--------LEFQRAKLKFEAELQALDS 208 (390)
T ss_pred CcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeeccccCcc--------hHHHHHHHHHHHHHHhccC
Confidence 899997611 0 14456788899999999998876421 1223478888888876 8
Q ss_pred CCCEEEEeCCCcc
Q 024643 225 GIPYTIIRTGVLQ 237 (265)
Q Consensus 225 gl~~tivRPg~l~ 237 (265)
+++|+|+||+.+.
T Consensus 209 gl~~tIlRp~~~~ 221 (390)
T PLN02657 209 DFTYSIVRPTAFF 221 (390)
T ss_pred CCCEEEEccHHHh
Confidence 9999999999754
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-16 Score=144.35 Aligned_cols=143 Identities=16% Similarity=0.072 Sum_probs=105.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc---
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--- 172 (265)
...+|+|+|||||||||++++++|+++||+|++++|............++++.+|+.|.+.+.++++++|+|||+..
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~ 97 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMG 97 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccC
Confidence 34568999999999999999999999999999999865321111112367888999999999999999999998721
Q ss_pred --h------------------HHHHHHHhCCCCEEEEecccccccCCCC------c--c---cccchhHH-HHHHHHHHH
Q 024643 173 --G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG------I--Q---ALMKGNAR-KLAEQDESM 220 (265)
Q Consensus 173 --~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~------~--~---~~~~~~~~-~~k~~~E~~ 220 (265)
. .+.+++++.++++|||+||..+|..... . + +..+...| ..|..+|++
T Consensus 98 ~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~ 177 (370)
T PLN02695 98 GMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEEL 177 (370)
T ss_pred CccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHH
Confidence 0 1344567789999999999988864311 1 0 12222233 477888877
Q ss_pred HH----hCCCCEEEEeCCCccC
Q 024643 221 LM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 221 l~----~~gl~~tivRPg~l~~ 238 (265)
+. ..+++++++||+.+..
T Consensus 178 ~~~~~~~~g~~~~ilR~~~vyG 199 (370)
T PLN02695 178 CKHYTKDFGIECRIGRFHNIYG 199 (370)
T ss_pred HHHHHHHhCCCEEEEEECCccC
Confidence 54 3799999999998653
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.5e-16 Score=145.44 Aligned_cols=140 Identities=14% Similarity=0.128 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhc-------CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~-------~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
..|+|+|||||||||++|+++|+++ |++|++++|+..+...+. ..+++++.+|+.|.+.+.++++++|+|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 4578999999999999999999998 599999998765543321 23689999999999999999999999998
Q ss_pred cCc-----hH-----------------HHHHHHhCCCCEEEEecccccccCCCC-----cccc-----------------
Q 024643 170 PSE-----GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG-----IQAL----------------- 205 (265)
Q Consensus 170 ~~~-----~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~-----~~~~----------------- 205 (265)
+.. .. +.+++++.+ ++|||+||..+|+.... ..+.
T Consensus 93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~ 171 (386)
T PLN02427 93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCI 171 (386)
T ss_pred cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccc
Confidence 721 00 223355566 89999999988864210 0000
Q ss_pred -----c-chhHHHHHHHHHHHHHh----CCCCEEEEeCCCccC
Q 024643 206 -----M-KGNARKLAEQDESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 206 -----~-~~~~~~~k~~~E~~l~~----~gl~~tivRPg~l~~ 238 (265)
. ...+...|..+|+++.. .+++++++||+.+..
T Consensus 172 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyG 214 (386)
T PLN02427 172 FGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIG 214 (386)
T ss_pred cCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeC
Confidence 0 01233588888888754 689999999998643
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.7e-17 Score=153.49 Aligned_cols=204 Identities=19% Similarity=0.257 Sum_probs=153.7
Q ss_pred ceeecceeeeecCCcccccCCCcceeeeeCCeeEEEecCCCccchhHHHHHHHhcCccccccccCCCCCCCCCCCCcccc
Q 024643 10 LVIQTSHISFTSQKKSFELANPSSLIFNFEKKVLFRCSAKKKISFVDQILDYIEGGPKLRKWYGAPDLLPKDGSNEEDEE 89 (265)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~lr~~~g~~~~~~~~~~~~~~~~ 89 (265)
++.--||++.+..+++...|++.++.++.+|+.. ++.+ ..+. +|. ..-.|++.|+....+.
T Consensus 181 iiiAips~~~~~~~~i~~~l~~~~~~v~~lP~~~-------------~l~~--~~~~-lre-I~ieDLLgR~pV~~d~-- 241 (588)
T COG1086 181 ILIAIPSASQEERRRILLRLARTGIAVRILPQLT-------------DLKD--LNGQ-LRE-IEIEDLLGRPPVALDT-- 241 (588)
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCcEEecCcHH-------------HHHH--hccc-ccc-CCHHHHhCCCCCCCCH--
Confidence 3455689999999999988999999999988753 3333 2222 443 1123788777666554
Q ss_pred cCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhh-------c-CCccEEeeeCCCCHHHHHHH
Q 024643 90 KEDEFPEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTA 160 (265)
Q Consensus 90 ~~~~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~-------~-~~~v~~i~~D~~d~~~l~~~ 160 (265)
........+++|+||||+|.||+++++++++.+ .++++++|++.+.... + ...+..+.+|+.|.+.+.++
T Consensus 242 -~~i~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~ 320 (588)
T COG1086 242 -ELIGAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERA 320 (588)
T ss_pred -HHHHhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHH
Confidence 445567789999999999999999999999988 6889999998664322 1 25678899999999999999
Q ss_pred HcC--CCEEEEcCc----------------------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-HHHH
Q 024643 161 LRG--VRSIICPSE----------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-KLAE 215 (265)
Q Consensus 161 ~~~--~d~vi~~~~----------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-~~k~ 215 (265)
+++ +|+|||+.. ..+.++|.+.||++||++||..+-.+. +.+ .+|+
T Consensus 321 ~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~Pt---------NvmGaTKr 391 (588)
T COG1086 321 MEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPT---------NVMGATKR 391 (588)
T ss_pred HhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCc---------hHhhHHHH
Confidence 998 999999711 125677889999999999998665432 222 3788
Q ss_pred HHHHHHHh-----C--CCCEEEEeCCCccCCCCC
Q 024643 216 QDESMLMA-----S--GIPYTIIRTGVLQNTPGG 242 (265)
Q Consensus 216 ~~E~~l~~-----~--gl~~tivRPg~l~~~~~~ 242 (265)
.+|.+++. + +..++++|.|.+.+..|.
T Consensus 392 ~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS 425 (588)
T COG1086 392 LAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS 425 (588)
T ss_pred HHHHHHHHHhhccCCCCcEEEEEEecceecCCCC
Confidence 88888765 2 377999999998766654
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1e-15 Score=140.38 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=104.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-----hhc--CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESF--GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-----~~~--~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.++++|+||||+||||++++++|+++|++|++++|+.++.. .+. ...++++.+|+.|.+.+.++++++|+|||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 45688999999999999999999999999999999865421 111 13578899999999999999999999998
Q ss_pred cCch-----------------HHHHHHHhCCCCEEEEecccc-cccCCCC-----ccc---------ccchhHH-HHHHH
Q 024643 170 PSEG-----------------FISNAGSLKGVQHVILLSQLS-VYRGSGG-----IQA---------LMKGNAR-KLAEQ 216 (265)
Q Consensus 170 ~~~~-----------------~~~~aa~~~gv~r~V~iSS~~-v~~~~~~-----~~~---------~~~~~~~-~~k~~ 216 (265)
+... .+.+++++.+++|||++||.. +|..... ... ..+...| ..|..
T Consensus 88 ~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~ 167 (342)
T PLN02214 88 TASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMV 167 (342)
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHH
Confidence 7210 134557778999999999964 6642110 100 0011223 47888
Q ss_pred HHHHHHh----CCCCEEEEeCCCccC
Q 024643 217 DESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 217 ~E~~l~~----~gl~~tivRPg~l~~ 238 (265)
+|+++.. .+++++++||+.+..
T Consensus 168 aE~~~~~~~~~~g~~~v~lRp~~vyG 193 (342)
T PLN02214 168 AEQAAWETAKEKGVDLVVLNPVLVLG 193 (342)
T ss_pred HHHHHHHHHHHcCCcEEEEeCCceEC
Confidence 8887643 699999999998644
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.7e-15 Score=136.58 Aligned_cols=138 Identities=21% Similarity=0.285 Sum_probs=104.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~------ 173 (265)
|+|+||||+|+||+++++.|+++|++|++++|+..+.......+++++.+|+.|.+++.++++++|+||++...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~ 80 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP 80 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence 57999999999999999999999999999999876654333447899999999999999999999999986210
Q ss_pred --------------HHHHHHHhCCCCEEEEecccccccCCCC---c---ccccc----hhHHHHHHHHHHHHHh----CC
Q 024643 174 --------------FISNAGSLKGVQHVILLSQLSVYRGSGG---I---QALMK----GNARKLAEQDESMLMA----SG 225 (265)
Q Consensus 174 --------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~---~---~~~~~----~~~~~~k~~~E~~l~~----~g 225 (265)
.+.+++...++++||++||..+|..... . .+..+ ..+...|...|+.++. .+
T Consensus 81 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 160 (328)
T TIGR03466 81 DPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKG 160 (328)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhcC
Confidence 1334466788999999999988763211 0 01110 1222467777777654 68
Q ss_pred CCEEEEeCCCcc
Q 024643 226 IPYTIIRTGVLQ 237 (265)
Q Consensus 226 l~~tivRPg~l~ 237 (265)
++++++||+.+.
T Consensus 161 ~~~~ilR~~~~~ 172 (328)
T TIGR03466 161 LPVVIVNPSTPI 172 (328)
T ss_pred CCEEEEeCCccC
Confidence 999999999754
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.8e-16 Score=145.03 Aligned_cols=140 Identities=16% Similarity=0.176 Sum_probs=103.1
Q ss_pred CCCCEEEEE----cCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-----------hcCCccEEeeeCCCCHHHHHHHH
Q 024643 97 EARDAVLVT----DGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-----------SFGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 97 ~~~~~vlVt----GatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-----------~~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
..+++|+|| ||||+||++|+++|+++||+|++++|+...... +...+++++.+|+.|.+.+. ..
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~~~-~~ 128 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPADVKSKV-AG 128 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHHHHhhh-cc
Confidence 345789999 999999999999999999999999998754221 11235899999998733322 23
Q ss_pred cCCCEEEEcCc------hHHHHHHHhCCCCEEEEecccccccCCCCc--ccccchhHHHHHHHHHHHHHhCCCCEEEEeC
Q 024643 162 RGVRSIICPSE------GFISNAGSLKGVQHVILLSQLSVYRGSGGI--QALMKGNARKLAEQDESMLMASGIPYTIIRT 233 (265)
Q Consensus 162 ~~~d~vi~~~~------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--~~~~~~~~~~~k~~~E~~l~~~gl~~tivRP 233 (265)
.++|+||++.. ..+.+++++.|++||||+||.++|...... ...........|..+|+++++.+++|+++||
T Consensus 129 ~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~sK~~~E~~l~~~~l~~~ilRp 208 (378)
T PLN00016 129 AGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKAGHLEVEAYLQKLGVNWTSFRP 208 (378)
T ss_pred CCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcchHHHHHHHHHHcCCCeEEEec
Confidence 57999998732 235677888999999999999998643211 0000011112678899999999999999999
Q ss_pred CCcc
Q 024643 234 GVLQ 237 (265)
Q Consensus 234 g~l~ 237 (265)
+.+.
T Consensus 209 ~~vy 212 (378)
T PLN00016 209 QYIY 212 (378)
T ss_pred eeEE
Confidence 9765
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.4e-15 Score=139.61 Aligned_cols=140 Identities=17% Similarity=0.218 Sum_probs=100.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---c-----CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
..++||||||+||||++++++|+++|++|++++|+....... . ...++++.+|+.|.+.+.++++++|.|||
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH 83 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH 83 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence 357899999999999999999999999999999986543321 1 12478899999999999999999999998
Q ss_pred cCc--------h---H----------HHHHHHhCC-CCEEEEecccccccCCCCc------cc----------ccch-hH
Q 024643 170 PSE--------G---F----------ISNAGSLKG-VQHVILLSQLSVYRGSGGI------QA----------LMKG-NA 210 (265)
Q Consensus 170 ~~~--------~---~----------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~------~~----------~~~~-~~ 210 (265)
+.. . . +.+++.+.+ ++|||++||.+++...... .. ..+. .+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (351)
T PLN02650 84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMY 163 (351)
T ss_pred eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchH
Confidence 711 0 0 223455555 7899999998765321100 00 0011 22
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
...|..+|++++ +.|++++++||+.+.
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~ 194 (351)
T PLN02650 164 FVSKTLAEKAAWKYAAENGLDFISIIPTLVV 194 (351)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEECCCceE
Confidence 347888887664 469999999999754
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.4e-15 Score=137.16 Aligned_cols=140 Identities=14% Similarity=0.153 Sum_probs=101.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh------hc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME------SF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~------~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+++|+||||+||||++|+++|+++|++|++++|+...... +. ...++++.+|++|.+.+.++++++|+|||+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 87 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFHV 87 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEEe
Confidence 46889999999999999999999999999999988643221 11 125789999999999999999999999987
Q ss_pred Cc--------h---H----------HHHHHHhC-CCCEEEEecccccccCCC----C--c------------ccccchhH
Q 024643 171 SE--------G---F----------ISNAGSLK-GVQHVILLSQLSVYRGSG----G--I------------QALMKGNA 210 (265)
Q Consensus 171 ~~--------~---~----------~~~aa~~~-gv~r~V~iSS~~v~~~~~----~--~------------~~~~~~~~ 210 (265)
.. . + +.+++.+. ++++||++||..+|.... . . ....+...
T Consensus 88 A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~ 167 (338)
T PLN00198 88 ATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWG 167 (338)
T ss_pred CCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccch
Confidence 21 0 0 22234443 689999999998875321 0 0 00111222
Q ss_pred H-HHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 211 R-KLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~-~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
| ..|..+|.++. ..+++++++||+.+.
T Consensus 168 Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vy 199 (338)
T PLN00198 168 YPASKTLAEKAAWKFAEENNIDLITVIPTLMA 199 (338)
T ss_pred hHHHHHHHHHHHHHHHHhcCceEEEEeCCceE
Confidence 3 47778887654 368999999999864
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.7e-15 Score=135.38 Aligned_cols=140 Identities=14% Similarity=0.202 Sum_probs=100.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh---hhc-----CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++|+||||+||||++++++|+++|++|++++|+..... .+. ...++++.+|+.|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999865421 111 23678999999999999999999999998
Q ss_pred cCc-----------hH----------HHHHHHhC-CCCEEEEeccccc--ccCCC--C---c------cccc----chhH
Q 024643 170 PSE-----------GF----------ISNAGSLK-GVQHVILLSQLSV--YRGSG--G---I------QALM----KGNA 210 (265)
Q Consensus 170 ~~~-----------~~----------~~~aa~~~-gv~r~V~iSS~~v--~~~~~--~---~------~~~~----~~~~ 210 (265)
+.. .. +.+++.+. +++|||++||.++ |.... . . .+.. ...+
T Consensus 83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 721 01 22334555 8899999999764 43211 0 0 0110 0112
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
...|..+|+++. +.+++++++||+.+.
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~ 193 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVI 193 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCccc
Confidence 246777777653 479999999999864
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-15 Score=135.11 Aligned_cols=140 Identities=17% Similarity=0.224 Sum_probs=100.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh---hc-----CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++|+||||+||||++++++|+++|++|+++.|+....+. +. ...++++.+|++|++.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 46899999999999999999999999999999998754321 11 23688999999999999999999999998
Q ss_pred cCc--------h---H----------HHHHHHhC-CCCEEEEecccccc--cCCC--C---c------ccc----cchhH
Q 024643 170 PSE--------G---F----------ISNAGSLK-GVQHVILLSQLSVY--RGSG--G---I------QAL----MKGNA 210 (265)
Q Consensus 170 ~~~--------~---~----------~~~aa~~~-gv~r~V~iSS~~v~--~~~~--~---~------~~~----~~~~~ 210 (265)
+.. . . +.+++++. +++|||++||.+++ .... . . .+. ....+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 721 0 0 22335554 78999999998754 2110 0 0 000 01122
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
...|..+|.++. +.+++++++||+.+.
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~ 194 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFIC 194 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEccccee
Confidence 347777776554 479999999999864
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.3e-15 Score=140.29 Aligned_cols=147 Identities=20% Similarity=0.193 Sum_probs=104.1
Q ss_pred CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-----------------hh------hcCCccEEee
Q 024643 92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----------------ME------SFGTYVESMA 148 (265)
Q Consensus 92 ~~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-----------------~~------~~~~~v~~i~ 148 (265)
......++|+|+||||+||||++|+++|+++|++|++++|..... .. ....+++++.
T Consensus 40 ~~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~ 119 (442)
T PLN02572 40 GSSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYV 119 (442)
T ss_pred CCCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEE
Confidence 345566788999999999999999999999999999987532100 00 0123688999
Q ss_pred eCCCCHHHHHHHHc--CCCEEEEcCc----h----------H-----------HHHHHHhCCCC-EEEEecccccccCCC
Q 024643 149 GDASNKKFLKTALR--GVRSIICPSE----G----------F-----------ISNAGSLKGVQ-HVILLSQLSVYRGSG 200 (265)
Q Consensus 149 ~D~~d~~~l~~~~~--~~d~vi~~~~----~----------~-----------~~~aa~~~gv~-r~V~iSS~~v~~~~~ 200 (265)
+|+.|.+.+.++++ ++|+|||+.. . . +.+++++.+++ +||++||..+|+...
T Consensus 120 ~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~ 199 (442)
T PLN02572 120 GDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN 199 (442)
T ss_pred CCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC
Confidence 99999999999997 4899998720 0 0 23346677885 999999999986421
Q ss_pred C-c-----------------ccccchhHH-HHHHHHHHHHH----hCCCCEEEEeCCCccC
Q 024643 201 G-I-----------------QALMKGNAR-KLAEQDESMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 201 ~-~-----------------~~~~~~~~~-~~k~~~E~~l~----~~gl~~tivRPg~l~~ 238 (265)
. . .+..+...| ..|..+|.+++ ..|++++++||+.+..
T Consensus 200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyG 260 (442)
T PLN02572 200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 260 (442)
T ss_pred CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccC
Confidence 0 0 011222233 47777777664 3699999999998643
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.8e-15 Score=134.79 Aligned_cols=138 Identities=14% Similarity=0.158 Sum_probs=101.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhc-CCccEEeeeCCC-CHHHHHHHHcCCCEEEEcC----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDAS-NKKFLKTALRGVRSIICPS---- 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~-d~~~l~~~~~~~d~vi~~~---- 171 (265)
+|+|+||||+||||++|+++|+++ |++|++++|+..+...+. ...++++.+|+. +.+.+.++++++|+|||+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~ 80 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIAT 80 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCC
Confidence 368999999999999999999986 699999998765443333 246899999997 7788888999999999861
Q ss_pred ch------------------HHHHHHHhCCCCEEEEecccccccCCCC--cc---------cc-cchhHH-HHHHHHHHH
Q 024643 172 EG------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ---------AL-MKGNAR-KLAEQDESM 220 (265)
Q Consensus 172 ~~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~~---------~~-~~~~~~-~~k~~~E~~ 220 (265)
+. .+.+++++.+ ++|||+||..+|..... .. +. .+...| ..|..+|++
T Consensus 81 ~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~ 159 (347)
T PRK11908 81 PATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRV 159 (347)
T ss_pred hHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHH
Confidence 11 1234466666 79999999988864211 00 00 111223 478888877
Q ss_pred HHh----CCCCEEEEeCCCcc
Q 024643 221 LMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l~~----~gl~~tivRPg~l~ 237 (265)
+.. .+++++++||+.+.
T Consensus 160 ~~~~~~~~~~~~~ilR~~~v~ 180 (347)
T PRK11908 160 IWAYGMEEGLNFTLFRPFNWI 180 (347)
T ss_pred HHHHHHHcCCCeEEEeeeeee
Confidence 753 78999999998753
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=7.5e-15 Score=129.37 Aligned_cols=141 Identities=16% Similarity=0.171 Sum_probs=107.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.++++++|||||++||++++++|+++|++|+++.|+.++++++ .+..++++.+|++|++++.+...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 4578999999999999999999999999999999999887665 23457899999999998887663
Q ss_pred CCCEEEEcCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 GVRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 ~~d~vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
.+|++|.+.+ .+ +..-+.+.+-++||.++|.+++.+.+...-|..++.+
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v 163 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFV 163 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHH
Confidence 4788886611 11 1111666778899999999998776544444444332
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+-.....+++..|+.++.|.||.+.
T Consensus 164 ~~fSeaL~~EL~~~gV~V~~v~PG~~~ 190 (265)
T COG0300 164 LSFSEALREELKGTGVKVTAVCPGPTR 190 (265)
T ss_pred HHHHHHHHHHhcCCCeEEEEEecCccc
Confidence 34455666778899999999999853
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.3e-15 Score=132.37 Aligned_cols=137 Identities=21% Similarity=0.255 Sum_probs=103.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCC-CEEEEcC-------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV-RSIICPS------- 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~-d~vi~~~------- 171 (265)
|.|||||||||||++|+++|+++||+|++++|...+..... ..++++.+|+.|.+.+.+.++++ |+|||+.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~ 79 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD 79 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence 34999999999999999999999999999999876654333 57899999999998888889888 9999871
Q ss_pred --ch----H----------HHHHHHhCCCCEEEEecccccccCCCCc-------ccccch-hHHHHHHHHHHHHHh----
Q 024643 172 --EG----F----------ISNAGSLKGVQHVILLSQLSVYRGSGGI-------QALMKG-NARKLAEQDESMLMA---- 223 (265)
Q Consensus 172 --~~----~----------~~~aa~~~gv~r~V~iSS~~v~~~~~~~-------~~~~~~-~~~~~k~~~E~~l~~---- 223 (265)
.. + +.+++++.++++|||.||.+++...... .+..+. .+-..|..+|+.+..
T Consensus 80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~~ 159 (314)
T COG0451 80 SNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARL 159 (314)
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 10 1 2344666799999998887766543110 111222 133588889988865
Q ss_pred CCCCEEEEeCCCcc
Q 024643 224 SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ~gl~~tivRPg~l~ 237 (265)
.+++++++||+.+.
T Consensus 160 ~~~~~~ilR~~~vy 173 (314)
T COG0451 160 YGLPVVILRPFNVY 173 (314)
T ss_pred hCCCeEEEeeeeee
Confidence 46999999999653
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=133.33 Aligned_cols=142 Identities=15% Similarity=0.227 Sum_probs=102.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....|+|+||||+||||++++++|+++|++|++++|+..+..... ...++++.+|+.|.+.+.++++++|+|||+
T Consensus 7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 86 (353)
T PLN02896 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHV 86 (353)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEEC
Confidence 345679999999999999999999999999999999875443221 245889999999999999999999999987
Q ss_pred Cc----h-------H------------------HHHHHHhC-CCCEEEEecccccccCCC-------Cc-----ccc---
Q 024643 171 SE----G-------F------------------ISNAGSLK-GVQHVILLSQLSVYRGSG-------GI-----QAL--- 205 (265)
Q Consensus 171 ~~----~-------~------------------~~~aa~~~-gv~r~V~iSS~~v~~~~~-------~~-----~~~--- 205 (265)
.. . . +.+++.+. ++++||++||..+|.... +. .+.
T Consensus 87 A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~ 166 (353)
T PLN02896 87 AASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHV 166 (353)
T ss_pred CccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHh
Confidence 11 0 0 12234444 488999999998885321 00 010
Q ss_pred ----cchhHH-HHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 206 ----MKGNAR-KLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ----~~~~~~-~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
.+...| ..|..+|+++. ..+++++++||+.+.
T Consensus 167 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vy 207 (353)
T PLN02896 167 WNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVA 207 (353)
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCccc
Confidence 011123 47888887664 368999999998754
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-14 Score=128.44 Aligned_cols=134 Identities=13% Similarity=0.110 Sum_probs=98.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~~~ 171 (265)
+++++||||+|+||++++++|+++|++|++++|+.++..++...+++++.+|++|.+++.++++ ++|++|++.
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~a 82 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNA 82 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 5789999999999999999999999999999999877665555568999999999999888775 689999872
Q ss_pred c-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH-
Q 024643 172 E-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM- 220 (265)
Q Consensus 172 ~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~- 220 (265)
+ .+ +...+++.+.++||++||.+.....+....|. ..|...+.+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sKaa~~~~~ 157 (273)
T PRK06182 83 GYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYH-----ATKFALEGFS 157 (273)
T ss_pred CcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhH-----HHHHHHHHHH
Confidence 1 00 11224566778999999976543322211221 234333332
Q ss_pred ------HHhCCCCEEEEeCCCcc
Q 024643 221 ------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 ------l~~~gl~~tivRPg~l~ 237 (265)
+...|+++++++||++.
T Consensus 158 ~~l~~e~~~~gi~v~~v~Pg~v~ 180 (273)
T PRK06182 158 DALRLEVAPFGIDVVVIEPGGIK 180 (273)
T ss_pred HHHHHHhcccCCEEEEEecCCcc
Confidence 34579999999999874
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-14 Score=131.92 Aligned_cols=133 Identities=20% Similarity=0.318 Sum_probs=100.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh----cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.+|+|+||||+|+||++++++|+++| ++|++++|+..+...+ ....++++.+|++|++.+.++++++|+|||+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 36899999999999999999999986 7899999876543221 12468899999999999999999999999872
Q ss_pred c----h------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHH-------
Q 024643 172 E----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM------- 222 (265)
Q Consensus 172 ~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~------- 222 (265)
+ . .+.+++...++++||++||.....+ .. .+...|..+|.+++
T Consensus 83 g~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~p------~~--~Y~~sK~~~E~l~~~~~~~~~ 154 (324)
T TIGR03589 83 ALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAANP------IN--LYGATKLASDKLFVAANNISG 154 (324)
T ss_pred ccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCCC------CC--HHHHHHHHHHHHHHHHHhhcc
Confidence 1 0 1334567788999999999754321 11 12236777777653
Q ss_pred hCCCCEEEEeCCCccC
Q 024643 223 ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 223 ~~gl~~tivRPg~l~~ 238 (265)
..|++++++|||.+..
T Consensus 155 ~~gi~~~~lR~g~v~G 170 (324)
T TIGR03589 155 SKGTRFSVVRYGNVVG 170 (324)
T ss_pred ccCcEEEEEeecceeC
Confidence 3689999999998754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=125.70 Aligned_cols=134 Identities=18% Similarity=0.115 Sum_probs=97.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-CCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-GVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-~~d~vi~~~ 171 (265)
+++|+||||+|+||++++++|+++|++|++++|+......+ .+..+.++.+|++|++++.+++. ++|.+|++.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 46899999999999999999999999999999987554332 23468899999999999998886 899999862
Q ss_pred ch-----------------H-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH---
Q 024643 172 EG-----------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE--- 218 (265)
Q Consensus 172 ~~-----------------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E--- 218 (265)
+. + +...+.+.+.++||++||.......+....|. ..|...|
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~-----~sK~a~~~~~ 156 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYC-----ASKHALEAIA 156 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhH-----HHHHHHHHHH
Confidence 10 0 11123456778999999986654433222222 2343333
Q ss_pred ----HHHHhCCCCEEEEeCCCcc
Q 024643 219 ----SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ----~~l~~~gl~~tivRPg~l~ 237 (265)
..+...|+++++||||++.
T Consensus 157 ~~l~~~~~~~gi~~~~v~pg~~~ 179 (257)
T PRK09291 157 EAMHAELKPFGIQVATVNPGPYL 179 (257)
T ss_pred HHHHHHHHhcCcEEEEEecCccc
Confidence 3344579999999999874
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=7.2e-15 Score=132.34 Aligned_cols=126 Identities=21% Similarity=0.172 Sum_probs=95.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc-----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE----- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~----- 172 (265)
|+||||||+||||++++++|+++| +|++++|... .+.+|+.|.+.+.++++ ++|+|||+..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence 689999999999999999999999 7988887532 24689999999999998 5899998711
Q ss_pred ------h-----------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHHHhCCCCEE
Q 024643 173 ------G-----------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESMLMASGIPYT 229 (265)
Q Consensus 173 ------~-----------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l~~~gl~~t 229 (265)
. .+.++|++.|+ ++||+||..+|..... . .+..+...| ..|..+|+++.....+++
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~~~~ 147 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQEHCAKHL 147 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 0 13344667775 7999999998854321 1 122233334 589999999988778899
Q ss_pred EEeCCCccC
Q 024643 230 IIRTGVLQN 238 (265)
Q Consensus 230 ivRPg~l~~ 238 (265)
++||+++..
T Consensus 148 ilR~~~vyG 156 (299)
T PRK09987 148 IFRTSWVYA 156 (299)
T ss_pred EEecceecC
Confidence 999998753
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-14 Score=129.55 Aligned_cols=140 Identities=15% Similarity=0.189 Sum_probs=99.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch------hhhc--CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------MESF--GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~------~~~~--~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++|+||||+|+||++++++|+++||+|++++|+.... ..+. +.+++++.+|++|.+++.+++.++|.+++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 467899999999999999999999999999999964321 1111 23688999999999999999999999986
Q ss_pred cC----c-----h-----------HHHHHHHhC-CCCEEEEecccccccC--C-CC----ccc--cc-ch------hHH-
Q 024643 170 PS----E-----G-----------FISNAGSLK-GVQHVILLSQLSVYRG--S-GG----IQA--LM-KG------NAR- 211 (265)
Q Consensus 170 ~~----~-----~-----------~~~~aa~~~-gv~r~V~iSS~~v~~~--~-~~----~~~--~~-~~------~~~- 211 (265)
.. . . .+.+++.+. +++|||++||.+++.. . .. ... .. .. ..|
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 41 0 0 023334444 6899999999876421 1 00 000 00 00 023
Q ss_pred HHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
..|..+|+++. ..++++++|||+++.
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~ 194 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLM 194 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCccc
Confidence 47888888773 469999999999864
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-14 Score=129.49 Aligned_cols=135 Identities=16% Similarity=0.146 Sum_probs=100.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--------CCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--------~~d~vi~ 169 (265)
++++|+||||+|+||++++++|+++|++|++++|+.++...+...+++++.+|++|.+++.++++ .+|.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 35789999999999999999999999999999999887766655578899999999988876654 4689887
Q ss_pred cCc----h--------------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 170 PSE----G--------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 170 ~~~----~--------------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
+.+ . .+...+++.+.++||++||...+.+.+....|. ..|...+.
T Consensus 83 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK~a~~~ 157 (277)
T PRK05993 83 NGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYN-----ASKFAIEG 157 (277)
T ss_pred CCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHH-----HHHHHHHH
Confidence 611 0 012235567788999999987665433322222 24444443
Q ss_pred H-------HHhCCCCEEEEeCCCcc
Q 024643 220 M-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~-------l~~~gl~~tivRPg~l~ 237 (265)
+ +...|+++++|+||++.
T Consensus 158 ~~~~l~~el~~~gi~v~~v~Pg~v~ 182 (277)
T PRK05993 158 LSLTLRMELQGSGIHVSLIEPGPIE 182 (277)
T ss_pred HHHHHHHHhhhhCCEEEEEecCCcc
Confidence 3 45579999999999874
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.4e-14 Score=131.22 Aligned_cols=141 Identities=14% Similarity=0.181 Sum_probs=101.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh---hc-----CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SF-----GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++|+||||+||||++++++|+++|++|++++|+...... .. ...++++.+|++|.+.+.++++++|+|||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 36899999999999999999999999999999988754321 11 13578899999999999999999999998
Q ss_pred cCc---------hH-------------HHHHHHh-CCCCEEEEecccccccCCC----C---------cccc---cc-hh
Q 024643 170 PSE---------GF-------------ISNAGSL-KGVQHVILLSQLSVYRGSG----G---------IQAL---MK-GN 209 (265)
Q Consensus 170 ~~~---------~~-------------~~~aa~~-~gv~r~V~iSS~~v~~~~~----~---------~~~~---~~-~~ 209 (265)
+.. .. +.+++.. .++++||++||..++.... + .++. .+ ..
T Consensus 84 ~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~ 163 (325)
T PLN02989 84 TASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW 163 (325)
T ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccc
Confidence 721 00 2223444 3578999999987653211 0 0110 00 11
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEeCCCccC
Q 024643 210 ARKLAEQDESMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 210 ~~~~k~~~E~~l~----~~gl~~tivRPg~l~~ 238 (265)
+...|..+|+++. ..+++++++||+.+..
T Consensus 164 Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyG 196 (325)
T PLN02989 164 YVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTG 196 (325)
T ss_pred hHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeC
Confidence 2347888887764 3699999999998643
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.2e-14 Score=134.55 Aligned_cols=144 Identities=16% Similarity=0.157 Sum_probs=102.9
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----------CCccEEeeeCCCCHHHHHHHHc
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------GTYVESMAGDASNKKFLKTALR 162 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----------~~~v~~i~~D~~d~~~l~~~~~ 162 (265)
.....+++|+||||+||||++++++|+++|++|++++|+.+....+. ...++++.+|++|.+++.++++
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 34556789999999999999999999999999999998765433211 1257889999999999999999
Q ss_pred CCCEEEEcC-----ch-----------------HHHHHHHhC-CCCEEEEecccc--cccC---CC-C--cc--------
Q 024643 163 GVRSIICPS-----EG-----------------FISNAGSLK-GVQHVILLSQLS--VYRG---SG-G--IQ-------- 203 (265)
Q Consensus 163 ~~d~vi~~~-----~~-----------------~~~~aa~~~-gv~r~V~iSS~~--v~~~---~~-~--~~-------- 203 (265)
++|.|||+. .. .+.+++++. +++||||+||.. +|.. .. + .+
T Consensus 128 ~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 128 GCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred hccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 999999761 01 033445554 799999999964 3421 00 0 10
Q ss_pred -cccchhHH-HHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 204 -ALMKGNAR-KLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 204 -~~~~~~~~-~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
+..+...| ..|..+|+++. ..|++++++||+++.
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vy 247 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVT 247 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceE
Confidence 00111123 47888888764 369999999999864
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.9e-15 Score=126.78 Aligned_cols=137 Identities=23% Similarity=0.263 Sum_probs=103.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCC--CEEEEc-Cc--h--
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGV--RSIICP-SE--G-- 173 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~--d~vi~~-~~--~-- 173 (265)
|+||||||+||++++++|+++|+.|+.+.|+........ ...++++.+|+.|.+.+.++++.. |+||++ .. .
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE 80 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence 799999999999999999999999999999876543221 127899999999999999999876 999977 11 0
Q ss_pred -----------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchh-HHHHHHHHHHHHHh----CCC
Q 024643 174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLMA----SGI 226 (265)
Q Consensus 174 -----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~-~~~~k~~~E~~l~~----~gl 226 (265)
.+.+++++.+++++|++||..+|...... .+..+.. +...|...|++++. .++
T Consensus 81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~~~ 160 (236)
T PF01370_consen 81 SFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKYGL 160 (236)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 03344777888999999999998765221 1111222 23477777777654 589
Q ss_pred CEEEEeCCCccC
Q 024643 227 PYTIIRTGVLQN 238 (265)
Q Consensus 227 ~~tivRPg~l~~ 238 (265)
+++++||+.+..
T Consensus 161 ~~~~~R~~~vyG 172 (236)
T PF01370_consen 161 RVTILRPPNVYG 172 (236)
T ss_dssp EEEEEEESEEES
T ss_pred cccccccccccc
Confidence 999999997543
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-14 Score=126.18 Aligned_cols=132 Identities=14% Similarity=0.125 Sum_probs=97.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC-------CCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~-------~d~vi~~~ 171 (265)
+++|+||||+|+||++++++|+++|++|++++|+.++... ..+++++++|++|++++.++++. +|++|++.
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 4689999999999999999999999999999998765432 34688999999999999888764 69999872
Q ss_pred ch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH--
Q 024643 172 EG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES-- 219 (265)
Q Consensus 172 ~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~-- 219 (265)
+. + +...+++.+.++||++||...+...+....|. ..|...+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~-----~sK~a~~~~~ 156 (270)
T PRK06179 82 GVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYA-----ASKHAVEGYS 156 (270)
T ss_pred CCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHH-----HHHHHHHHHH
Confidence 10 0 11124567889999999987665433222222 23333333
Q ss_pred -----HHHhCCCCEEEEeCCCcc
Q 024643 220 -----MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 -----~l~~~gl~~tivRPg~l~ 237 (265)
.+...|+++++++||++.
T Consensus 157 ~~l~~el~~~gi~v~~v~pg~~~ 179 (270)
T PRK06179 157 ESLDHEVRQFGIRVSLVEPAYTK 179 (270)
T ss_pred HHHHHHHhhhCcEEEEEeCCCcc
Confidence 344579999999999864
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.6e-14 Score=131.10 Aligned_cols=141 Identities=18% Similarity=0.160 Sum_probs=100.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
.+|+|+||||+||||+++++.|+++|++|++++|+....... ....++++.+|++|.+.+.+++++ +|.||++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 358999999999999999999999999999999987543211 123577899999999999999875 5999987
Q ss_pred Cch----------------------HHHHHHHhCC-CCEEEEecccccccCCCC---c---ccccchhHH-HHHHHHHHH
Q 024643 171 SEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG---I---QALMKGNAR-KLAEQDESM 220 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~g-v~r~V~iSS~~v~~~~~~---~---~~~~~~~~~-~~k~~~E~~ 220 (265)
... .+.++++..+ +++||++||..+|..... . .+..+...| ..|..+|.+
T Consensus 83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~ 162 (349)
T TIGR02622 83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELV 162 (349)
T ss_pred CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHH
Confidence 210 0233455555 789999999888754211 1 011112222 367777776
Q ss_pred HHh-----------CCCCEEEEeCCCccC
Q 024643 221 LMA-----------SGIPYTIIRTGVLQN 238 (265)
Q Consensus 221 l~~-----------~gl~~tivRPg~l~~ 238 (265)
++. .+++++++||+.+..
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~lR~~~vyG 191 (349)
T TIGR02622 163 IASYRSSFFGVANFHGIKIASARAGNVIG 191 (349)
T ss_pred HHHHHHHhhcccccCCCcEEEEccCcccC
Confidence 643 289999999998643
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-14 Score=141.92 Aligned_cols=141 Identities=13% Similarity=0.081 Sum_probs=102.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHH-HHHHHcCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNKKF-LKTALRGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~-l~~~~~~~d~vi~~~~ 172 (265)
.-++|+|+|||||||||++|+++|+++ ||+|++++|......... ..+++++.+|++|.+. +.++++++|+|||+..
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa 391 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVA 391 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECcc
Confidence 345789999999999999999999986 799999999775433222 2468999999998665 5778899999998611
Q ss_pred ----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---c------ccc-c-hhHHHHHHHH
Q 024643 173 ----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---Q------ALM-K-GNARKLAEQD 217 (265)
Q Consensus 173 ----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~------~~~-~-~~~~~~k~~~ 217 (265)
. .+.++|++.+ ++|||+||..+|+.... . . +.. + ..+...|..+
T Consensus 392 ~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~ 470 (660)
T PRK08125 392 IATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLL 470 (660)
T ss_pred ccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHH
Confidence 0 0234466777 89999999988864211 1 0 110 1 1233588888
Q ss_pred HHHHH----hCCCCEEEEeCCCcc
Q 024643 218 ESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~----~~gl~~tivRPg~l~ 237 (265)
|++++ ..+++++++||+.+.
T Consensus 471 E~~~~~~~~~~g~~~~ilR~~~vy 494 (660)
T PRK08125 471 DRVIWAYGEKEGLRFTLFRPFNWM 494 (660)
T ss_pred HHHHHHHHHhcCCceEEEEEceee
Confidence 88874 368999999999754
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=5.7e-14 Score=124.70 Aligned_cols=134 Identities=13% Similarity=0.140 Sum_probs=96.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
+++++||||+|+||++++++|+++|++|++++|+.++...+. +..+..+.+|++|.+++.++++ .+|++|
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 578999999999999999999999999999999887654432 3467889999999999887765 479999
Q ss_pred EcCch-----------------H---------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSEG-----------------F---------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~~-----------------~---------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+. + +.++ +++.+.++||++||.++....++...|.. .|...|
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~-----sK~a~~ 158 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCG-----SKFALE 158 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHH-----HHHHHH
Confidence 87210 0 1111 34456679999999877654433323322 333333
Q ss_pred HH-------HHhCCCCEEEEeCCCcc
Q 024643 219 SM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+ +...|++++++|||++.
T Consensus 159 ~~~~~la~e~~~~gi~v~~i~Pg~v~ 184 (277)
T PRK06180 159 GISESLAKEVAPFGIHVTAVEPGSFR 184 (277)
T ss_pred HHHHHHHHHhhhhCcEEEEEecCCcc
Confidence 32 33469999999999874
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.1e-14 Score=124.44 Aligned_cols=140 Identities=14% Similarity=0.136 Sum_probs=99.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
.+++++||||+|+||++++++|+++|++|++.+|++++.++... ..++++.+|++|++++.++++ ++|.+|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35799999999999999999999999999999998876544321 247889999999998766553 578898
Q ss_pred EcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHH
Q 024643 169 CPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (265)
Q Consensus 169 ~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~ 216 (265)
++.+. + +...+.+.+.++||++||.....+.+....|..++.. .....
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (273)
T PRK07825 84 NNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDA 163 (273)
T ss_pred ECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHH
Confidence 76210 0 1122456778899999998876554433333332221 12233
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+..+..+|+++++|+||++.
T Consensus 164 l~~el~~~gi~v~~v~Pg~v~ 184 (273)
T PRK07825 164 ARLELRGTGVHVSVVLPSFVN 184 (273)
T ss_pred HHHHhhccCcEEEEEeCCcCc
Confidence 344456689999999999864
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-13 Score=120.69 Aligned_cols=140 Identities=17% Similarity=0.198 Sum_probs=98.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.... .+..++++.+|+.|++++.++++ .+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999987654332 23568889999999999887775 57
Q ss_pred CEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HH
Q 024643 165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 212 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~ 212 (265)
|++|++... + +...+++.+.++||++||...+.+..+...|...+. ..
T Consensus 83 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~ 162 (258)
T PRK12429 83 DILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIG 162 (258)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHH
Confidence 999986210 0 112245567889999999877655443333332221 11
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...+++++++|||++.
T Consensus 163 ~~~~l~~~~~~~~i~v~~~~pg~v~ 187 (258)
T PRK12429 163 LTKVVALEGATHGVTVNAICPGYVD 187 (258)
T ss_pred HHHHHHHHhcccCeEEEEEecCCCc
Confidence 1111122234578999999999874
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.9e-14 Score=123.81 Aligned_cols=133 Identities=14% Similarity=0.194 Sum_probs=95.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
.++++||||+|+||++++++|+++|++|+++.|+.+....+ .+.++.++++|++|.+++.++++ .+|++|
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987655433 24578899999999998887664 479999
Q ss_pred EcCch-------------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~~-------------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+. + +.++ +++.+.++||++||.+.....++...|. ..|...|
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK~a~~ 156 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYH-----ATKWGIE 156 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhH-----HHHHHHH
Confidence 87210 0 1112 3556778999999987644332222222 2444444
Q ss_pred HHH-------HhCCCCEEEEeCCCc
Q 024643 219 SML-------MASGIPYTIIRTGVL 236 (265)
Q Consensus 219 ~~l-------~~~gl~~tivRPg~l 236 (265)
.++ ...|++++++|||.+
T Consensus 157 ~~~~~l~~~~~~~gi~v~~v~pg~~ 181 (276)
T PRK06482 157 GFVEAVAQEVAPFGIEFTIVEPGPA 181 (276)
T ss_pred HHHHHHHHHhhccCcEEEEEeCCcc
Confidence 333 336999999999986
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-14 Score=130.50 Aligned_cols=149 Identities=26% Similarity=0.384 Sum_probs=107.3
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-----CccEEeeeCCCCHHH-HHHHHcC----
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKF-LKTALRG---- 163 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~v~~i~~D~~d~~~-l~~~~~~---- 163 (265)
......++|+|+||||.+|+.+++.|+++|+.|+++.|+.+++..+.. .....+..|.....+ +....+.
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~ 153 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKG 153 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccc
Confidence 344556789999999999999999999999999999999988776644 234444554443332 2333322
Q ss_pred CCEEEEc----Cc---------------hHHHHHHHhCCCCEEEEecccccccCCCCccccc-chhHHHHHHHHHHHHHh
Q 024643 164 VRSIICP----SE---------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALM-KGNARKLAEQDESMLMA 223 (265)
Q Consensus 164 ~d~vi~~----~~---------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~-~~~~~~~k~~~E~~l~~ 223 (265)
..+++.+ .. ..+.+||+.+|++|||++|+.+......+.+... ....+.+|+.+|+++++
T Consensus 154 ~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~ 233 (411)
T KOG1203|consen 154 VVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQD 233 (411)
T ss_pred ceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHh
Confidence 2234433 11 1267788999999999999998876665554443 33456789999999999
Q ss_pred CCCCEEEEeCCCccCCCCC
Q 024643 224 SGIPYTIIRTGVLQNTPGG 242 (265)
Q Consensus 224 ~gl~~tivRPg~l~~~~~~ 242 (265)
+|++|+|||||.+....++
T Consensus 234 Sgl~ytiIR~g~~~~~~~~ 252 (411)
T KOG1203|consen 234 SGLPYTIIRPGGLEQDTGG 252 (411)
T ss_pred cCCCcEEEeccccccCCCC
Confidence 9999999999987654444
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.57 E-value=9e-14 Score=122.13 Aligned_cols=129 Identities=27% Similarity=0.345 Sum_probs=106.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------- 172 (265)
|+|+||||||++|++++++|+++|++|++++|+.+++..+. .++++..+|+.++.++...++|++.++++..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~~~~~ 79 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLDGSDA 79 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEecccccccc
Confidence 58999999999999999999999999999999999888777 8899999999999999999999999887622
Q ss_pred hH------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 173 GF------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 173 ~~------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
.. ..+.+++. ++++++++|...+.... +..+...|...|+.+.++|++++++|+..+
T Consensus 80 ~~~~~~~~~~~~a~~a~~~~~~~~~~s~~~~~~~~-------~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~ 144 (275)
T COG0702 80 FRAVQVTAVVRAAEAAGAGVKHGVSLSVLGADAAS-------PSALARAKAAVEAALRSSGIPYTTLRRAAF 144 (275)
T ss_pred hhHHHHHHHHHHHHHhcCCceEEEEeccCCCCCCC-------ccHHHHHHHHHHHHHHhcCCCeEEEecCee
Confidence 11 22334554 47899999988765422 123445888999999999999999996653
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=8e-14 Score=127.82 Aligned_cols=138 Identities=13% Similarity=0.119 Sum_probs=94.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc---hhhh----cCCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMES----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~----~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
++|+|||||||||+++++.|+++|++++++.++... .... ....++++.+|+.|.+++.+++++ +|.|||+
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~ 81 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL 81 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence 689999999999999999999999886654443211 1111 123577889999999999999984 8999987
Q ss_pred Cch----------------------HHHHHHHh---------CCCCEEEEecccccccCCCC----c---ccccchh-HH
Q 024643 171 SEG----------------------FISNAGSL---------KGVQHVILLSQLSVYRGSGG----I---QALMKGN-AR 211 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~---------~gv~r~V~iSS~~v~~~~~~----~---~~~~~~~-~~ 211 (265)
... .+.+++.. .++++||++||..+|..... . .+..+.. +.
T Consensus 82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~ 161 (355)
T PRK10217 82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYS 161 (355)
T ss_pred CcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhH
Confidence 210 02233433 35789999999988763211 1 1111222 23
Q ss_pred HHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
..|..+|.++. +.+++++++||+.+.
T Consensus 162 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~ 191 (355)
T PRK10217 162 ASKASSDHLVRAWLRTYGLPTLITNCSNNY 191 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCCeEEEeeeeee
Confidence 47777777664 468999999999754
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5e-14 Score=139.24 Aligned_cols=138 Identities=14% Similarity=0.215 Sum_probs=100.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHH--HCCCeEEEEEeCCcch--hhh---c-CCccEEeeeCCCCH------HHHHHHHcCCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNA--MES---F-GTYVESMAGDASNK------KFLKTALRGVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll--~~G~~V~~~~R~~~~~--~~~---~-~~~v~~i~~D~~d~------~~l~~~~~~~d 165 (265)
|+|+|||||||||++|+++|+ ..|++|++++|+.... ..+ . ..+++++.+|+.|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 589999999999999999999 5899999999975321 111 1 14689999999984 455555 8999
Q ss_pred EEEEcCch-------------------HHHHHHHhCCCCEEEEecccccccCCCCc--------ccccchhHHHHHHHHH
Q 024643 166 SIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------QALMKGNARKLAEQDE 218 (265)
Q Consensus 166 ~vi~~~~~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--------~~~~~~~~~~~k~~~E 218 (265)
+|||+... .+.+++++.++++||++||..++...... .......+...|.++|
T Consensus 80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E 159 (657)
T PRK07201 80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAE 159 (657)
T ss_pred EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHH
Confidence 99987210 13455777889999999999887532211 0001122345889999
Q ss_pred HHHHh-CCCCEEEEeCCCccC
Q 024643 219 SMLMA-SGIPYTIIRTGVLQN 238 (265)
Q Consensus 219 ~~l~~-~gl~~tivRPg~l~~ 238 (265)
+++++ .+++++++||+.+..
T Consensus 160 ~~~~~~~g~~~~ilRp~~v~G 180 (657)
T PRK07201 160 KLVREECGLPWRVYRPAVVVG 180 (657)
T ss_pred HHHHHcCCCcEEEEcCCeeee
Confidence 99874 789999999998654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.6e-14 Score=127.64 Aligned_cols=136 Identities=11% Similarity=0.037 Sum_probs=97.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhhc-------CCccEEeeeCCCCHHHHHHHHcC--CC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALRG--VR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~~-------~~~v~~i~~D~~d~~~l~~~~~~--~d 165 (265)
++|+||||+||||++++++|+++|++|++++|+.+. ...+. +.+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 589999999999999999999999999999997542 11111 23588999999999999999985 59
Q ss_pred EEEEcCc------h----------------HHHHHHHhCCCC---EEEEecccccccCCCC--c---ccccchhHH-HHH
Q 024643 166 SIICPSE------G----------------FISNAGSLKGVQ---HVILLSQLSVYRGSGG--I---QALMKGNAR-KLA 214 (265)
Q Consensus 166 ~vi~~~~------~----------------~~~~aa~~~gv~---r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k 214 (265)
+|||+.. . .+.++|+..+++ +||++||..+|+.... . .+..+...| .+|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK 160 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAK 160 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHH
Confidence 9998721 0 023345566764 8999999998864311 1 112222233 478
Q ss_pred HHHHHHHHh----CCCCEEEEeCCC
Q 024643 215 EQDESMLMA----SGIPYTIIRTGV 235 (265)
Q Consensus 215 ~~~E~~l~~----~gl~~tivRPg~ 235 (265)
..+|.+++. .++++++.|+..
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T TIGR01472 161 LYAHWITVNYREAYGLFAVNGILFN 185 (343)
T ss_pred HHHHHHHHHHHHHhCCceEEEeecc
Confidence 888887743 588888777653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.2e-13 Score=125.53 Aligned_cols=137 Identities=19% Similarity=0.148 Sum_probs=97.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-------hhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-------ESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-------~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|+|+||||+|+||++++++|+++|++|++++|...... ...+..+.++.+|+.|.+.+.++++ ++|+||++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 68999999999999999999999999999876432211 1113357788999999999998886 58999986
Q ss_pred Cc-----h-----------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccc-cc-hhHHHHHHHHHHHH
Q 024643 171 SE-----G-----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QAL-MK-GNARKLAEQDESML 221 (265)
Q Consensus 171 ~~-----~-----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~-~~-~~~~~~k~~~E~~l 221 (265)
.. . .+.++++..++++||++||.++|..... . .+. .+ ..+...|..+|+++
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~ 160 (338)
T PRK10675 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_pred CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHH
Confidence 21 0 1334567788999999999988753211 0 011 11 12234788888877
Q ss_pred Hh-----CCCCEEEEeCCCc
Q 024643 222 MA-----SGIPYTIIRTGVL 236 (265)
Q Consensus 222 ~~-----~gl~~tivRPg~l 236 (265)
+. .+++++++|++.+
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v 180 (338)
T PRK10675 161 TDLQKAQPDWSIALLRYFNP 180 (338)
T ss_pred HHHHHhcCCCcEEEEEeeee
Confidence 53 3789999997653
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.3e-14 Score=124.50 Aligned_cols=122 Identities=20% Similarity=0.282 Sum_probs=92.9
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCC--CEEEEcCch-----
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV--RSIICPSEG----- 173 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~--d~vi~~~~~----- 173 (265)
+|+||||||+||++++++|+++|++|++++|+ .+|+.|.+.+.++++++ |+||++...
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~ 65 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------QLDLTDPEALERLLRAIRPDAVVNTAAYTDVDG 65 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence 58999999999999999999999999999885 47999999999999876 999987210
Q ss_pred -----------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHHHhCCCCEEE
Q 024643 174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESMLMASGIPYTI 230 (265)
Q Consensus 174 -----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l~~~gl~~ti 230 (265)
.+.+++++.+. +||++||..+|..... . .+..+...| ..|..+|++++..++++++
T Consensus 66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~~~~~~i 144 (287)
T TIGR01214 66 AESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAAGPNALI 144 (287)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHhCCCeEE
Confidence 02233555664 8999999988754211 1 011112223 5888999999988999999
Q ss_pred EeCCCccC
Q 024643 231 IRTGVLQN 238 (265)
Q Consensus 231 vRPg~l~~ 238 (265)
+||+.+.+
T Consensus 145 lR~~~v~G 152 (287)
T TIGR01214 145 VRTSWLYG 152 (287)
T ss_pred EEeeeccc
Confidence 99998653
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.5e-14 Score=141.44 Aligned_cols=116 Identities=14% Similarity=0.243 Sum_probs=97.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~------ 173 (265)
|+|+||||+|+||++++++|+++|++|++++|+.... ...+++++.+|+.|.+.+.++++++|+|||+...
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---~~~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~ 77 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---WPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDH 77 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---cccCceEEEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence 5899999999999999999999999999999975321 2246889999999999999999999999987211
Q ss_pred -------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 174 -------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 174 -------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+.+++++.++++||++||.. |.++|+++.+++++++++||+++.
T Consensus 78 vNv~GT~nLLeAa~~~gvkr~V~iSS~~-------------------K~aaE~ll~~~gl~~vILRp~~VY 129 (854)
T PRK05865 78 INIDGTANVLKAMAETGTGRIVFTSSGH-------------------QPRVEQMLADCGLEWVAVRCALIF 129 (854)
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEECCcH-------------------HHHHHHHHHHcCCCEEEEEeceEe
Confidence 144567788999999999853 567888888899999999999864
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.1e-13 Score=117.59 Aligned_cols=142 Identities=15% Similarity=0.233 Sum_probs=96.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-------hcCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-------~~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
++++|+||||+|+||++++++|+++|++|+++.|+..+... ..+.++.++.+|+.|++++.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999887876543211 123468899999999999887764 5
Q ss_pred CCEEEEcCc-----h--------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSE-----G--------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|.+|++.+ . + +. ..+++.++++||++||...+........|...+..
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~ 164 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLV 164 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHH
Confidence 699998621 0 0 11 11345678999999998876544322222222110
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCccCC
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQNT 239 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~~~ 239 (265)
......+..+...+++++++|||++.+.
T Consensus 165 ~~~~~~~~~~~~~~i~~~~i~pg~~~~~ 192 (249)
T PRK12825 165 GLTKALARELAEYGITVNMVAPGDIDTD 192 (249)
T ss_pred HHHHHHHHHHhhcCeEEEEEEECCccCC
Confidence 1112222334457999999999987543
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2e-13 Score=118.66 Aligned_cols=140 Identities=14% Similarity=0.153 Sum_probs=96.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
.+++++||||+|+||++++++|+++|++|++++|+.+..... .+..+.++++|++|++++.++++ .+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999999999999999999999987654322 13457899999999999887765 689
Q ss_pred EEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH--H
Q 024643 166 SIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK--L 213 (265)
Q Consensus 166 ~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~--~ 213 (265)
.+|++... + +..++++.+.++||++||............|...+... .
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASL 163 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence 99987210 0 11224556778999999987654433333332222110 1
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.......+...+++++++|||++.
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~ 187 (252)
T PRK06138 164 TRAMALDHATDGIRVNAVAPGTID 187 (252)
T ss_pred HHHHHHHHHhcCeEEEEEEECCcc
Confidence 111112233468999999999873
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=2.5e-13 Score=117.47 Aligned_cols=142 Identities=15% Similarity=0.182 Sum_probs=98.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||.+++++|+++|++|++++|+..+..+. .+..+.++.+|++|++++.++++ ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 357899999999999999999999999999999987654322 23468889999999999888775 68
Q ss_pred CEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|.+|++.+. + +. ..+.+.+.+++|++||...+........|...+.. .
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 165 (239)
T PRK07666 86 DILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLG 165 (239)
T ss_pred cEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence 999987210 0 01 11334567899999998776554433333332221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCccCC
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQNT 239 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~~~ 239 (265)
........+...|+++++||||++...
T Consensus 166 ~~~~~a~e~~~~gi~v~~v~pg~v~t~ 192 (239)
T PRK07666 166 LTESLMQEVRKHNIRVTALTPSTVATD 192 (239)
T ss_pred HHHHHHHHhhccCcEEEEEecCcccCc
Confidence 112223334557999999999987543
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=2e-13 Score=119.33 Aligned_cols=140 Identities=14% Similarity=0.105 Sum_probs=95.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHcC-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~-------~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|++++..+. .+..+.++++|++|.+++.++++. +
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999988544322 234577899999999998877653 7
Q ss_pred CEEEEcCch-------------H-----------------HHHHH-HhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 165 RSIICPSEG-------------F-----------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa-~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
|++||+... + +...+ +..+.++||++||.......+....|...+..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~ 165 (262)
T PRK13394 86 DILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLL 165 (262)
T ss_pred CEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 999987210 0 12224 55678899999998765443332233222211
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+...+.+...+++++++|||++.
T Consensus 166 ~~~~~la~~~~~~~i~v~~v~pg~v~ 191 (262)
T PRK13394 166 GLARVLAKEGAKHNVRSHVVCPGFVR 191 (262)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 11111112233468999999999864
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=116.26 Aligned_cols=142 Identities=13% Similarity=0.181 Sum_probs=97.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh----hcCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
..+++++||||+|+||++++++|+++|++|++++|+..+..+ +....++++.+|+.|.+++.++++ ++|
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD 84 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence 346899999999999999999999999999999998765332 233467888999999998877665 579
Q ss_pred EEEEcCch-------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--HH
Q 024643 166 SIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 213 (265)
Q Consensus 166 ~vi~~~~~-------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~ 213 (265)
.+|++.+. + +.+ .++..++++||++||...+........|...+.. ..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~ 164 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL 164 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence 99886210 0 111 1234678899999999877654333223222110 01
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
.....+.+...+++++++|||++..
T Consensus 165 ~~~~a~~~~~~~i~~~~i~pg~v~~ 189 (239)
T PRK12828 165 TEALAAELLDRGITVNAVLPSIIDT 189 (239)
T ss_pred HHHHHHHhhhcCeEEEEEecCcccC
Confidence 1122223345789999999998754
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-13 Score=119.80 Aligned_cols=134 Identities=16% Similarity=0.159 Sum_probs=95.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-----CccEEeeeCCCCHHHHHHHHcC-------CCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRG-------VRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~v~~i~~D~~d~~~l~~~~~~-------~d~ 166 (265)
+++|+||||+|+||++++++|+++|++|++++|+.++.++... ..+.++.+|++|++++.++++. +|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4789999999999999999999999999999998766543311 1578899999999998877643 699
Q ss_pred EEEcCc-----------h---H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 167 IICPSE-----------G---F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 167 vi~~~~-----------~---~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++.+ . + +...+++.+.++||++||.....+.+....|.. .|.
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a-----sK~ 156 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSA-----SKA 156 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHH-----HHH
Confidence 998611 0 0 112345566789999999876544332222322 333
Q ss_pred HHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 216 QDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..+. .++..|+++++++||++.
T Consensus 157 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 185 (257)
T PRK07024 157 AAIKYLESLRVELRPAGVRVVTIAPGYIR 185 (257)
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCc
Confidence 3332 234579999999999874
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-13 Score=119.06 Aligned_cols=140 Identities=16% Similarity=0.174 Sum_probs=97.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
.+++++||||+|+||++++++|+++|++|++++|+..+..... +..+.++.+|+.|++++.++++ .+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999999999999999999999986544321 2357799999999999987765 469
Q ss_pred EEEEcCc-----h-H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~-----~-~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
++|++.+ . + +...+++.+.++||++||...+.+......|...+.. .
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~ 163 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT 163 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence 9998721 0 0 1112344677899999998887655443333322211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
........+...++++++++||++.
T Consensus 164 ~~~~~a~~~~~~~i~v~~i~pg~~~ 188 (251)
T PRK07231 164 LTKALAAELGPDKIRVNAVAPVVVE 188 (251)
T ss_pred HHHHHHHHhhhhCeEEEEEEECccC
Confidence 1112222233468999999999873
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.9e-13 Score=118.40 Aligned_cols=135 Identities=14% Similarity=0.114 Sum_probs=96.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||+.++++|+++|++|++++|+.++...+ .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999987654432 13468889999999998877665 47
Q ss_pred CEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|.+|++.+. + ....+++.+.++||++||...+.+......|.. .|
T Consensus 85 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~-----sK 159 (241)
T PRK07454 85 DVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCV-----SK 159 (241)
T ss_pred CEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHH-----HH
Confidence 999987210 0 111234456689999999887655433323322 33
Q ss_pred HHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 215 EQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
...+. .+...|+++++||||++.
T Consensus 160 ~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~ 189 (241)
T PRK07454 160 AALAAFTKCLAEEERSHGIRVCTITLGAVN 189 (241)
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEecCccc
Confidence 33332 234569999999999874
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.7e-13 Score=123.08 Aligned_cols=138 Identities=16% Similarity=0.167 Sum_probs=99.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-------hhh---cCCccEEeeeCCCCHHHHHHHHc--CCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MES---FGTYVESMAGDASNKKFLKTALR--GVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-------~~~---~~~~v~~i~~D~~d~~~l~~~~~--~~d 165 (265)
++++|+||||+|+||++++++|+++|++|++++|..... ... .+.+++++.+|+.|++.+.++++ ++|
T Consensus 4 ~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~d 83 (352)
T PLN02240 4 MGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRFD 83 (352)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCCC
Confidence 467999999999999999999999999999998754221 111 12468899999999999998886 689
Q ss_pred EEEEcCc------h----------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHH
Q 024643 166 SIICPSE------G----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQD 217 (265)
Q Consensus 166 ~vi~~~~------~----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~ 217 (265)
.||++.. . .+.+++++.++++||++||.++|..... . .+..+...| ..|..+
T Consensus 84 ~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~ 163 (352)
T PLN02240 84 AVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFI 163 (352)
T ss_pred EEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence 9998721 0 1334567788999999999888753211 0 111112223 478888
Q ss_pred HHHHHh-----CCCCEEEEeCCC
Q 024643 218 ESMLMA-----SGIPYTIIRTGV 235 (265)
Q Consensus 218 E~~l~~-----~gl~~tivRPg~ 235 (265)
|++++. .+++++++|++.
T Consensus 164 e~~~~~~~~~~~~~~~~~~R~~~ 186 (352)
T PLN02240 164 EEICRDIHASDPEWKIILLRYFN 186 (352)
T ss_pred HHHHHHHHHhcCCCCEEEEeecC
Confidence 888753 468899999864
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.7e-13 Score=118.27 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=97.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcc-hhh----hc---CCccEEeeeCCCCHHHHHHHHc------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN-AME----SF---GTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~-~~~----~~---~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..++|+||||+|+||++++++|+++| ++|++++|+.++ .++ +. ..+++++.+|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 46789999999999999999999995 999999998765 322 11 2368899999999887655443
Q ss_pred CCCEEEEcC----c--h-----------H-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 GVRSIICPS----E--G-----------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 ~~d~vi~~~----~--~-----------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
++|.+|++. + . + +...+++.+.++||++||.....+......|..++..
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~ 166 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL 166 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence 688888651 0 0 0 1223556677899999998764433222233332221
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
......+.+++.+++++++++||++.+
T Consensus 167 ~~~~~~l~~el~~~~i~v~~v~Pg~v~t 194 (253)
T PRK07904 167 DGFYLGLGEALREYGVRVLVVRPGQVRT 194 (253)
T ss_pred HHHHHHHHHHHhhcCCEEEEEeeCceec
Confidence 112334555667899999999999754
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.3e-13 Score=120.56 Aligned_cols=139 Identities=12% Similarity=0.141 Sum_probs=96.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
+++|+||||+|+||++++++|+++|++|++++|+.+..+.+ .+..+.++++|++|.+++.++++ .+|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987665433 23467888999999998877654 579999
Q ss_pred EcCch-------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHH
Q 024643 169 CPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (265)
Q Consensus 169 ~~~~~-------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~ 216 (265)
++.+. + +.. .+++.+.+++|++||...+.+......|...+.. .....
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~ 162 (275)
T PRK08263 83 NNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEA 162 (275)
T ss_pred ECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHH
Confidence 87210 0 111 1355677899999998776654433233222211 01112
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+...|++++++|||++.
T Consensus 163 la~e~~~~gi~v~~v~Pg~~~ 183 (275)
T PRK08263 163 LAQEVAEFGIKVTLVEPGGYS 183 (275)
T ss_pred HHHHhhhhCcEEEEEecCCcc
Confidence 222234579999999999864
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=2.2e-13 Score=112.62 Aligned_cols=135 Identities=13% Similarity=0.194 Sum_probs=101.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc---C-ch--
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP---S-EG-- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~---~-~~-- 173 (265)
|||.|+||||.+|+++++.+..+||+|++++|++++.... +.+.+++.|+.|++++.+.+.+.|+||.+ . ++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~~ 78 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDND 78 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--ccceeecccccChhhhHhhhcCCceEEEeccCCCCChh
Confidence 7899999999999999999999999999999999887643 57889999999999999999999999976 1 11
Q ss_pred --------HHHHHHHhCCCCEEEEecccccccCCCCc----ccccchhHHH-HHHHHH---HHHHhCCCCEEEEeCCCc
Q 024643 174 --------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QALMKGNARK-LAEQDE---SMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 174 --------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----~~~~~~~~~~-~k~~~E---~~l~~~gl~~tivRPg~l 236 (265)
.+....+.+++.|++.++.++...-.++. .+.++..++. .+..+| .+-.+..++||.+.|..+
T Consensus 79 ~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~ 157 (211)
T COG2910 79 ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAF 157 (211)
T ss_pred HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHh
Confidence 14455677899999999987764322211 1223333332 223333 223346799999999964
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.8e-13 Score=136.07 Aligned_cols=140 Identities=21% Similarity=0.249 Sum_probs=101.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCC--cchhhh----cCCccEEeeeCCCCHHHHHHHH--cCCCEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK--RNAMES----FGTYVESMAGDASNKKFLKTAL--RGVRSII 168 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~--~~~~~~----~~~~v~~i~~D~~d~~~l~~~~--~~~d~vi 168 (265)
.|+|||||||||||++|+++|+++ +++|++++|.. .....+ ...+++++.+|+.|.+.+..++ .++|+||
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~Vi 85 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTIM 85 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEEE
Confidence 579999999999999999999998 68999988753 111111 1346899999999999888766 6899999
Q ss_pred EcCch----------------------HHHHHHHhCC-CCEEEEecccccccCCCCc--------ccccchh-HHHHHHH
Q 024643 169 CPSEG----------------------FISNAGSLKG-VQHVILLSQLSVYRGSGGI--------QALMKGN-ARKLAEQ 216 (265)
Q Consensus 169 ~~~~~----------------------~~~~aa~~~g-v~r~V~iSS~~v~~~~~~~--------~~~~~~~-~~~~k~~ 216 (265)
|+... .+.+++++.+ ++||||+||..+|+..... .+..+.. +..+|..
T Consensus 86 HlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 165 (668)
T PLN02260 86 HFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAG 165 (668)
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHH
Confidence 87210 1334566666 8999999999988643211 0111222 2347888
Q ss_pred HHHHHHh----CCCCEEEEeCCCccC
Q 024643 217 DESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 217 ~E~~l~~----~gl~~tivRPg~l~~ 238 (265)
+|++++. .+++++++||+.+..
T Consensus 166 aE~~v~~~~~~~~l~~vilR~~~VyG 191 (668)
T PLN02260 166 AEMLVMAYGRSYGLPVITTRGNNVYG 191 (668)
T ss_pred HHHHHHHHHHHcCCCEEEECcccccC
Confidence 8888753 689999999997643
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=117.78 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=95.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
|+|+||||+|+||.++++.|+++|++|++++|++++...+ .+.+++++.+|++|.+++.++++ ++|.+|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999999999999999999999999999998765443 24468899999999998877664 6899997
Q ss_pred cCch------H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 170 PSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 170 ~~~~------~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
+.+. + +...+++.+.++||++||........+...|.. .|...+
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~-----sK~~~~ 155 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGA-----TKAFVR 155 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHH-----HHHHHH
Confidence 6210 0 111244567789999999876543332223322 333333
Q ss_pred HH-------HHhCCCCEEEEeCCCcc
Q 024643 219 SM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+ +...++.+++|+||.+.
T Consensus 156 ~~~~~l~~~~~~~~i~v~~v~pg~i~ 181 (248)
T PRK10538 156 QFSLNLRTDLHGTAVRVTDIEPGLVG 181 (248)
T ss_pred HHHHHHHHHhcCCCcEEEEEeCCeec
Confidence 32 23468999999999874
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.6e-13 Score=116.70 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=95.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
++++|+||||+|+||++++++|+++|++|++++|+.++.... .+..+.++.+|+.|++++.++++ .+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999999999999999999999986543321 13458889999999999888775 57
Q ss_pred CEEEEcCch-------------H-------------HHHH----HHhCCCCEEEEecccccc-cCCCCcccccchhHHHH
Q 024643 165 RSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 d~vi~~~~~-------------~-------------~~~a----a~~~gv~r~V~iSS~~v~-~~~~~~~~~~~~~~~~~ 213 (265)
|.+|++.+. + +.++ +...+.++||++||...+ ........|. ..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~-----~s 159 (251)
T PRK12826 85 DILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYA-----AS 159 (251)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHH-----HH
Confidence 999987210 0 1111 245667899999998776 3222221222 23
Q ss_pred HHHHH-------HHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDE-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E-------~~l~~~gl~~tivRPg~l~ 237 (265)
|..++ ..+...+++++++|||++.
T Consensus 160 K~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~ 190 (251)
T PRK12826 160 KAGLVGFTRALALELAARNITVNSVHPGGVD 190 (251)
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEeeCCCC
Confidence 33322 2344469999999999874
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.53 E-value=3.2e-13 Score=116.40 Aligned_cols=140 Identities=14% Similarity=0.196 Sum_probs=95.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHcC-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------V 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~-------~ 164 (265)
++++|+||||+|+||++++++|+++|++|++++|++.+.... .+..+.++.+|+.|++++.+++++ +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999997654322 234678889999999988777654 5
Q ss_pred CEEEEcCch-------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~~-------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|.+|++.+. + +.. .+.+.++++||++||............|...+.. .
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~ 163 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIG 163 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHH
Confidence 999987210 0 111 1245677899999998665433322233222211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
......+.+...+++++++|||.+.
T Consensus 164 ~~~~l~~~~~~~~i~~~~i~pg~~~ 188 (246)
T PRK05653 164 FTKALALELASRGITVNAVAPGFID 188 (246)
T ss_pred HHHHHHHHHhhcCeEEEEEEeCCcC
Confidence 1112223344578999999999864
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=3.8e-13 Score=117.58 Aligned_cols=136 Identities=13% Similarity=0.180 Sum_probs=95.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.... .+..+.++.+|++|.+++.++++ .
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999999999999999999999999999987654332 12347888999999999888775 3
Q ss_pred CCEEEEcCc-----hH---------------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
.|++|++.+ .+ +.. .+.+.+.++||++||.......+....|.. .
T Consensus 88 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~-----s 162 (255)
T PRK07523 88 IDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTA-----T 162 (255)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHH-----H
Confidence 789998721 00 111 133456789999999876544332222222 3
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...|+++++||||++.
T Consensus 163 K~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~ 193 (255)
T PRK07523 163 KGAVGNLTKGMATDWAKHGLQCNAIAPGYFD 193 (255)
T ss_pred HHHHHHHHHHHHHHhhHhCeEEEEEEECccc
Confidence 3333332 34579999999999864
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.9e-13 Score=114.56 Aligned_cols=134 Identities=14% Similarity=0.211 Sum_probs=97.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc---CCCEEEEcCch
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~~ 173 (265)
.+++++||||+|+||++++++|+++|+ +|++++|+.++..+ .+..++++.+|+.|.+++.++++ .+|++|++.+.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 83 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAGI 83 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 457899999999999999999999998 99999998876554 44578899999999999988776 47999987211
Q ss_pred ------H---------------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH--
Q 024643 174 ------F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM-- 220 (265)
Q Consensus 174 ------~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~-- 220 (265)
+ +.+ .++..+.++||++||...+.+......|.. .|...+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~-----sK~a~~~~~~ 158 (238)
T PRK08264 84 FRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSA-----SKAAAWSLTQ 158 (238)
T ss_pred CCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHH-----HHHHHHHHHH
Confidence 0 111 133456789999999877654433322222 33333322
Q ss_pred -----HHhCCCCEEEEeCCCcc
Q 024643 221 -----LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 -----l~~~gl~~tivRPg~l~ 237 (265)
+...+++++++|||.+.
T Consensus 159 ~l~~~~~~~~i~~~~v~pg~v~ 180 (238)
T PRK08264 159 ALRAELAPQGTRVLGVHPGPID 180 (238)
T ss_pred HHHHHhhhcCeEEEEEeCCccc
Confidence 33468999999999873
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.5e-13 Score=118.16 Aligned_cols=140 Identities=15% Similarity=0.059 Sum_probs=95.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc----CCccEEeeeCCCCHHHHHHHHc--------CCCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR--------GVRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~~~v~~i~~D~~d~~~l~~~~~--------~~d~ 166 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.+++. +..++++++|++|.+++.++++ .+|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 367999999999999999999999999999999987655432 3468899999999998887664 4599
Q ss_pred EEEcCch-------------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 167 IICPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 167 vi~~~~~-------------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
+|++.+. + + ...++..+..+||++||............|..++.. ...
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLT 160 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHH
Confidence 9987210 0 1 111344566899999997665443332233222211 011
Q ss_pred HHHHHHHHhCCCCEEEEeCCCccC
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
......+...++++++|+||++..
T Consensus 161 ~~l~~~~~~~~i~v~~i~pg~~~t 184 (260)
T PRK08267 161 EALDLEWRRHGIRVADVMPLFVDT 184 (260)
T ss_pred HHHHHHhcccCcEEEEEecCCcCC
Confidence 111122334689999999999743
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.2e-13 Score=120.89 Aligned_cols=137 Identities=15% Similarity=0.126 Sum_probs=95.4
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCc-----chhhh-cCCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR-----NAMES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~-----~~~~~-~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
+|+||||||+||++++++|+++| ++|++++|... ..... ...+++++.+|++|++++.+++++ +|+||++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 78988876321 11111 123688899999999999999987 8999987
Q ss_pred Cch----------------------HHHHHHHhCCCC-EEEEecccccccCCCCc------ccccchh-HHHHHHHHHHH
Q 024643 171 SEG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI------QALMKGN-ARKLAEQDESM 220 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~gv~-r~V~iSS~~v~~~~~~~------~~~~~~~-~~~~k~~~E~~ 220 (265)
... .+.+++.+.+.+ ++|++||..+|...... .+..+.. +-..|..+|.+
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 160 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHL 160 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHH
Confidence 210 122345555444 89999998887543211 1111112 22467777776
Q ss_pred HH----hCCCCEEEEeCCCcc
Q 024643 221 LM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l~----~~gl~~tivRPg~l~ 237 (265)
++ +.+++++++||+.+.
T Consensus 161 ~~~~~~~~~~~~~i~R~~~i~ 181 (317)
T TIGR01181 161 VRAYHRTYGLPALITRCSNNY 181 (317)
T ss_pred HHHHHHHhCCCeEEEEecccc
Confidence 54 468999999999764
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.7e-13 Score=116.40 Aligned_cols=133 Identities=17% Similarity=0.150 Sum_probs=92.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------cCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~~~d~ 166 (265)
++++||||+|+||++++++|+++|++|++++|+.+....+ .+..+.++.+|+.|.+++..++ .++|.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5899999999999999999999999999999987654332 2346888999999999665544 45799
Q ss_pred EEEcCc-----------h--H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE-----------G--F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----------~--~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.. . + +...+++.++++||++||...+.+.+....|.. .|..
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~-----sk~a 156 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVA-----AKHG 156 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHH-----HHHH
Confidence 998621 0 0 111135567889999999876554332222322 2222
Q ss_pred HHH-------HHHhCCCCEEEEeCCCcc
Q 024643 217 DES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.+. .+...+++++++|||++.
T Consensus 157 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~ 184 (255)
T TIGR01963 157 LIGLTKVLALEVAAHGITVNAICPGYVR 184 (255)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 222 233468999999999864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.7e-13 Score=115.75 Aligned_cols=141 Identities=12% Similarity=0.073 Sum_probs=95.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHHcC------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRG------ 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~~~------ 163 (265)
.+++|+||||+|+||++++++|+++|++|++++|+.++.+.. ....+.++.+|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987664322 122456779999999998887753
Q ss_pred -CCEEEEcCch----------------H-----------------HHHHHHhCCCCEEEEecccccccCCCC----cccc
Q 024643 164 -VRSIICPSEG----------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG----IQAL 205 (265)
Q Consensus 164 -~d~vi~~~~~----------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~----~~~~ 205 (265)
+|++|++... + +...+++.+.++||++||..+...... ..+.
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~ 162 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSM 162 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhcccccc
Confidence 7999977210 0 111244567789999999765432110 0000
Q ss_pred -cchhHHHHHHHHHHHH-------HhCCCCEEEEeCCCccC
Q 024643 206 -MKGNARKLAEQDESML-------MASGIPYTIIRTGVLQN 238 (265)
Q Consensus 206 -~~~~~~~~k~~~E~~l-------~~~gl~~tivRPg~l~~ 238 (265)
....+...|...+.+. ...++++++++||++.+
T Consensus 163 ~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~ 203 (256)
T PRK09186 163 TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILD 203 (256)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccC
Confidence 0111222454444433 34789999999998643
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.3e-13 Score=117.85 Aligned_cols=141 Identities=15% Similarity=0.137 Sum_probs=98.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------~ 163 (265)
..+++++||||+++||++++++|+++|++|++++|+.+++++. .+.++.++.+|++|++++.++++ .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 3568999999999999999999999999999999987654332 13468899999999998887765 4
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--H
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 211 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~ 211 (265)
+|.+|++.+ . + +...+++.+.++||++||.....+.+....|...+. .
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~ 165 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMA 165 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHH
Confidence 788887621 0 0 112255566789999999877544332222222111 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|++++.|.||++.
T Consensus 166 ~l~~~la~el~~~gIrVn~v~PG~v~ 191 (263)
T PRK08339 166 GLVRTLAKELGPKGITVNGIMPGIIR 191 (263)
T ss_pred HHHHHHHHHhcccCeEEEEEEeCcCc
Confidence 12233344455689999999999873
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=4e-13 Score=119.04 Aligned_cols=133 Identities=15% Similarity=0.207 Sum_probs=93.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHH-------cC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTAL-------RG 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~-------~~ 163 (265)
+++++||||+|+||+++++.|+++|++|++++|+.+..+... +..++++.+|++|++++.+ + ..
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 468999999999999999999999999999999876543321 2468889999999988765 4 34
Q ss_pred CCEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|.+|++.+. + +. ..+++.+.++||++||........+...|.. .
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~-----s 156 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVS-----S 156 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHH-----h
Confidence 6899887210 0 01 1145567789999999766544333333322 3
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...|++++++|||.+.
T Consensus 157 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~ 187 (280)
T PRK06914 157 KYALEGFSESLRLELKPFGIDVALIEPGSYN 187 (280)
T ss_pred HHHHHHHHHHHHHHhhhhCCEEEEEecCCcc
Confidence 3333332 23469999999999863
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6e-13 Score=117.53 Aligned_cols=138 Identities=14% Similarity=0.125 Sum_probs=96.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
|+|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|+.|++++.++++ .+|.
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 5799999999999999999999999999999987654432 23467889999999998877664 6899
Q ss_pred EEEcCch-----H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 167 IICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 167 vi~~~~~-----~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
+|++.+. + +...+++.+.++||++||..+..+......|...+.. ...
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~ 160 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALS 160 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence 9987210 0 1122455677899999998776544333222222211 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
......+...|+++++|+||++.
T Consensus 161 ~~l~~e~~~~gi~v~~v~Pg~v~ 183 (270)
T PRK05650 161 ETLLVELADDEIGVHVVCPSFFQ 183 (270)
T ss_pred HHHHHHhcccCcEEEEEecCccc
Confidence 22223344479999999999874
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.4e-13 Score=121.22 Aligned_cols=132 Identities=19% Similarity=0.291 Sum_probs=95.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhh---c-----CCccE----EeeeCCCCHHHHHHHHc--CCCE
Q 024643 102 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES---F-----GTYVE----SMAGDASNKKFLKTALR--GVRS 166 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~---~-----~~~v~----~i~~D~~d~~~l~~~~~--~~d~ 166 (265)
||||||+|.||++|+++|++.+ .++++++|++.++..+ . ..++. .+.+|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999998 6899999998664332 1 22343 45899999999999998 8999
Q ss_pred EEEcCc----------------------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-HHHHHHHHHHHh
Q 024643 167 IICPSE----------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-KLAEQDESMLMA 223 (265)
Q Consensus 167 vi~~~~----------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-~~k~~~E~~l~~ 223 (265)
|||+.. ..+.++|.+.++++||++||..+..+. +.+ .+|+.+|.++..
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~Pt---------nvmGatKrlaE~l~~~ 151 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVNPT---------NVMGATKRLAEKLVQA 151 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-----------SHHHHHHHHHHHHHHH
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCCCC---------cHHHHHHHHHHHHHHH
Confidence 999821 015566888999999999998775432 222 388999999865
Q ss_pred -------CCCCEEEEeCCCccCCCCC
Q 024643 224 -------SGIPYTIIRTGVLQNTPGG 242 (265)
Q Consensus 224 -------~gl~~tivRPg~l~~~~~~ 242 (265)
.+..+++||.|.+.+..|.
T Consensus 152 ~~~~~~~~~t~f~~VRFGNVlgS~GS 177 (293)
T PF02719_consen 152 ANQYSGNSDTKFSSVRFGNVLGSRGS 177 (293)
T ss_dssp HCCTSSSS--EEEEEEE-EETTGTTS
T ss_pred HhhhCCCCCcEEEEEEecceecCCCc
Confidence 2468999999988766654
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.1e-13 Score=115.61 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEE-EEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+|+||++++++|+++|++|++ ..|+..+.++. .+..+.++.+|++|++++.++++ .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999999999876 46776543322 23467889999999998887775 4
Q ss_pred CCEEEEcCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ .+ ....+++.+.++||++||............|. ..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~-----~s 157 (250)
T PRK08063 83 LDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVG-----VS 157 (250)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHH-----HH
Confidence 799998721 00 11113445677999999976654333222222 24
Q ss_pred HHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 214 AEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
|...|.++ ...++++++|+||++.
T Consensus 158 K~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~ 188 (250)
T PRK08063 158 KAALEALTRYLAVELAPKGIAVNAVSGGAVD 188 (250)
T ss_pred HHHHHHHHHHHHHHHhHhCeEEEeEecCccc
Confidence 44444443 3478999999999874
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=119.15 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=83.7
Q ss_pred EEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcc---hhhh----------------cCCccEEeeeCCCCH------HH
Q 024643 104 VTDGDSDIGQMVILSLIVKRT--RIKALVKDKRN---AMES----------------FGTYVESMAGDASNK------KF 156 (265)
Q Consensus 104 VtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~---~~~~----------------~~~~v~~i~~D~~d~------~~ 156 (265)
|||||||+|.+|+++|++++. +|+++.|..+. .+.+ ...+++++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 99999998632 1111 157899999999874 45
Q ss_pred HHHHHcCCCEEEEcCch-------------------HHHHHHHhCCCCEEEEecccccccCCCCc---------------
Q 024643 157 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--------------- 202 (265)
Q Consensus 157 l~~~~~~~d~vi~~~~~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--------------- 202 (265)
...+.+.+|+|||+... .+.+.|...+.++|+|+||..+.......
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~~ 160 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLDP 160 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--EEE-
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccccchh
Confidence 66777899999998211 13444665666799999995443222110
Q ss_pred ccccchhHHHHHHHHHHHHHh----CCCCEEEEeCCCccCCCCC
Q 024643 203 QALMKGNARKLAEQDESMLMA----SGIPYTIIRTGVLQNTPGG 242 (265)
Q Consensus 203 ~~~~~~~~~~~k~~~E~~l~~----~gl~~tivRPg~l~~~~~~ 242 (265)
.......+..+|..+|+++++ .|++++|+|||.+...+..
T Consensus 161 ~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~ 204 (249)
T PF07993_consen 161 PQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRT 204 (249)
T ss_dssp -TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSS
T ss_pred hccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCC
Confidence 011122344689999998865 3999999999997664443
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.4e-13 Score=115.36 Aligned_cols=139 Identities=14% Similarity=0.142 Sum_probs=94.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc----CCCEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR----GVRSI 167 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~----~~d~v 167 (265)
+|+++||||+|+||++++++|+++|++|++++|+.++.... ...+++++++|++|++++.++++ .+|.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 46899999999999999999999999999999988654332 13468899999999998887765 35888
Q ss_pred EEcCch-----------------H-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHH
Q 024643 168 ICPSEG-----------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 215 (265)
Q Consensus 168 i~~~~~-----------------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~ 215 (265)
|++.+. + +...+.+.+.++||++||.....+......|...+. .....
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 160 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLS 160 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHH
Confidence 876110 0 011134456789999999865443332222322221 11112
Q ss_pred HHHHHHHhCCCCEEEEeCCCcc
Q 024643 216 QDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.....+...|+++++++||++.
T Consensus 161 ~l~~el~~~gi~v~~v~pg~v~ 182 (243)
T PRK07102 161 GLRNRLFKSGVHVLTVKPGFVR 182 (243)
T ss_pred HHHHHhhccCcEEEEEecCccc
Confidence 2223345679999999999874
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.9e-13 Score=118.44 Aligned_cols=138 Identities=13% Similarity=0.125 Sum_probs=97.2
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
....+++++||||+|+||++++++|+++|++|++++|+.+++++. .+..+.++++|++|.+++.++++
T Consensus 36 ~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 115 (293)
T PRK05866 36 VDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI 115 (293)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 344568999999999999999999999999999999997654433 13457789999999999888776
Q ss_pred -CCCEEEEcCch------------H--------------------HHHHHHhCCCCEEEEecccccccCC-CCcccccch
Q 024643 163 -GVRSIICPSEG------------F--------------------ISNAGSLKGVQHVILLSQLSVYRGS-GGIQALMKG 208 (265)
Q Consensus 163 -~~d~vi~~~~~------------~--------------------~~~aa~~~gv~r~V~iSS~~v~~~~-~~~~~~~~~ 208 (265)
.+|++|++.+. . +...+++.+.++||++||.+++... +....|.
T Consensus 116 g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~-- 193 (293)
T PRK05866 116 GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYN-- 193 (293)
T ss_pred CCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHH--
Confidence 78999987210 0 0111345677899999997665422 2111222
Q ss_pred hHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. ++...++++++++||.+.
T Consensus 194 ---asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~ 226 (293)
T PRK05866 194 ---ASKAALSAVSRVIETEWGDRGVHSTTLYYPLVA 226 (293)
T ss_pred ---HHHHHHHHHHHHHHHHhcccCcEEEEEEcCccc
Confidence 23433332 334579999999999763
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.6e-13 Score=114.55 Aligned_cols=140 Identities=14% Similarity=0.213 Sum_probs=96.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|+..+...+ .+.+++++.+|+.|.+++.++++ .+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468899999999999999999999999999999987654332 23468899999999998887765 57
Q ss_pred CEEEEcCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|.+|++.. .+ +...+++.+.++||++||..++.+......|...+.. .
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVA 161 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHH
Confidence 99998721 00 1112345667899999998877554433333222210 0
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...++++++++||++.
T Consensus 162 ~~~~la~~~~~~~i~v~~v~pg~~~ 186 (250)
T TIGR03206 162 FSKTMAREHARHGITVNVVCPGPTD 186 (250)
T ss_pred HHHHHHHHHhHhCcEEEEEecCccc
Confidence 1111111223358999999999863
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=9.8e-13 Score=115.21 Aligned_cols=135 Identities=15% Similarity=0.117 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh---hh--cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..+++++||||+|+||++++++|+++|++|++++|+....+ ++ .+..+.++.+|++|.+++.++++ .+
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999999999999753211 11 13457789999999988776654 57
Q ss_pred CEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 165 RSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
|.+|++.+ .+ +...+++.+.++||++||...+... ..+|. ..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--~~~Y~-----~s 158 (260)
T PRK12823 86 DVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGIN--RVPYS-----AA 158 (260)
T ss_pred eEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCCC--CCccH-----HH
Confidence 99998621 00 1122445667799999998765321 11222 23
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCccC
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~~ 238 (265)
|...+.+ +...|+++++|+||++..
T Consensus 159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t 190 (260)
T PRK12823 159 KGGVNALTASLAFEYAEHGIRVNAVAPGGTEA 190 (260)
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEecCccCC
Confidence 4333333 334699999999998743
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.2e-13 Score=127.33 Aligned_cols=136 Identities=15% Similarity=0.075 Sum_probs=95.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-----hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-----~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....|+|+|||||||||++|+++|+++|++|++++|...... .....+++++.+|+.++ ++.++|.|||+
T Consensus 116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHl 190 (442)
T PLN02206 116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHL 190 (442)
T ss_pred ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEe
Confidence 335689999999999999999999999999999987532211 11234678888998775 34689999987
Q ss_pred Cc----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c--------ccccchhHH-HHHHHH
Q 024643 171 SE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I--------QALMKGNAR-KLAEQD 217 (265)
Q Consensus 171 ~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~--------~~~~~~~~~-~~k~~~ 217 (265)
.. . .+.++|++.++ +||++||..+|..... . ++..+...| ..|..+
T Consensus 191 Aa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~a 269 (442)
T PLN02206 191 ACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTA 269 (442)
T ss_pred eeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHH
Confidence 21 0 13455777786 8999999999864311 0 121111223 478888
Q ss_pred HHHHHh----CCCCEEEEeCCCcc
Q 024643 218 ESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~----~gl~~tivRPg~l~ 237 (265)
|+++.. .+++++++||+.+.
T Consensus 270 E~~~~~y~~~~g~~~~ilR~~~vy 293 (442)
T PLN02206 270 ETLTMDYHRGANVEVRIARIFNTY 293 (442)
T ss_pred HHHHHHHHHHhCCCeEEEEecccc
Confidence 887653 68999999998754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=7.4e-13 Score=116.09 Aligned_cols=136 Identities=13% Similarity=0.129 Sum_probs=96.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999999987654432 13457789999999998887764
Q ss_pred -CCCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+. + ....+++.+.++||++||.......+...+|..
T Consensus 85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~---- 160 (260)
T PRK07063 85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPV---- 160 (260)
T ss_pred CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHH----
Confidence 68999987210 0 011134455679999999876654433323322
Q ss_pred HHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|++++.|+||++.
T Consensus 161 -sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~ 192 (260)
T PRK07063 161 -AKHGLLGLTRALGIEYAARNVRVNAIAPGYIE 192 (260)
T ss_pred -HHHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence 33333332 34478999999999873
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.2e-13 Score=118.63 Aligned_cols=137 Identities=22% Similarity=0.245 Sum_probs=96.7
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhhc----CCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCch
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESF----GTYVESMAGDASNKKFLKTALR--GVRSIICPSEG 173 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~----~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~~ 173 (265)
+|+||||+|+||++++++|+++|++|++++|..... .... ...++++.+|+.|.+++.++++ ++|+||++.+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 589999999999999999999999999886643221 1111 0147788999999999999886 68999977210
Q ss_pred ----------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchh-HHHHHHHHHHHHHh--
Q 024643 174 ----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLMA-- 223 (265)
Q Consensus 174 ----------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~-~~~~k~~~E~~l~~-- 223 (265)
.+.+++.+.++++||++||..+|...... .+..+.. +...|..+|.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~ 160 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLS 160 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHH
Confidence 12344667788999999998887533210 0111112 23477777877653
Q ss_pred ---CCCCEEEEeCCCcc
Q 024643 224 ---SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ---~gl~~tivRPg~l~ 237 (265)
.+++++++||+.+.
T Consensus 161 ~~~~~~~~~ilR~~~v~ 177 (328)
T TIGR01179 161 KADPGLSYVILRYFNVA 177 (328)
T ss_pred HhccCCCEEEEecCccc
Confidence 68999999998654
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.49 E-value=5.9e-13 Score=121.22 Aligned_cols=139 Identities=19% Similarity=0.261 Sum_probs=98.8
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcch------hhhc----------C-CccEEeeeCCCCH------H
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA------MESF----------G-TYVESMAGDASNK------K 155 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~------~~~~----------~-~~v~~i~~D~~d~------~ 155 (265)
+|+||||||+||++++++|+++| ++|++++|+.+.. .... . .+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999999 6799999986522 1100 1 4689999998753 5
Q ss_pred HHHHHHcCCCEEEEcCc------h-------------HHHHHHHhCCCCEEEEecccccccCCCCc-----c-----cc-
Q 024643 156 FLKTALRGVRSIICPSE------G-------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----Q-----AL- 205 (265)
Q Consensus 156 ~l~~~~~~~d~vi~~~~------~-------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~-----~~- 205 (265)
.+..+.+++|.||++.. . .+.+++...++++||++||.+++...... . ..
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~ 160 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPG 160 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccc
Confidence 66777789999998721 0 13345667788899999999887542110 0 00
Q ss_pred cchhHHHHHHHHHHHHHh---CCCCEEEEeCCCccCC
Q 024643 206 MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNT 239 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~l~~---~gl~~tivRPg~l~~~ 239 (265)
....+...|..+|.+++. .|++++++|||.+...
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 161 LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGN 197 (367)
T ss_pred cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeec
Confidence 011233477778877654 4999999999987643
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.3e-12 Score=114.58 Aligned_cols=135 Identities=16% Similarity=0.205 Sum_probs=95.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh---h---cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S---FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~---~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|+++.|+. +.+. . .+..+.++.+|++|.+++.++++ .
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999983 2221 1 23468899999999998887765 5
Q ss_pred CCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|.+|++.+. + +...++..+.+++|++||...+.+......|.. .
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a-----s 166 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTA-----S 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHH-----H
Confidence 7999986210 0 111244556689999999877654433223322 3
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...|+++++|+||++.
T Consensus 167 K~a~~~~~~~la~e~~~~gi~v~~i~PG~v~ 197 (258)
T PRK06935 167 KHGVAGLTKAFANELAAYNIQVNAIAPGYIK 197 (258)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEecccc
Confidence 3333332 33478999999999874
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.4e-12 Score=112.82 Aligned_cols=141 Identities=12% Similarity=0.125 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.++++++||||+|+||++++++|+++|++|+++ .|+.++.... .+..+.++.+|++|++++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 456799999999999999999999999999998 8887554322 13457889999999999887765
Q ss_pred CCCEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhH--
Q 024643 163 GVRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 163 ~~d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
.+|.+|++.+. + +. ..+.+.+.++||++||............|...+.
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~ 162 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAV 162 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHH
Confidence 78999986210 0 11 1133456778999999876544333223322211
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..........+...|+++++++||++.
T Consensus 163 ~~~~~~~~~~~~~~gi~~~~v~pg~v~ 189 (247)
T PRK05565 163 NAFTKALAKELAPSGIRVNAVAPGAID 189 (247)
T ss_pred HHHHHHHHHHHHHcCeEEEEEEECCcc
Confidence 011112222234579999999999874
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=116.21 Aligned_cols=136 Identities=15% Similarity=0.170 Sum_probs=95.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.+...+. .+..+.++.+|++|++++.++++ .
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3457999999999999999999999999999999987544322 13457788999999999887765 5
Q ss_pred CCEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+. + +. ..+...+..+||++||...+.+.+....|. ..
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~s 162 (274)
T PRK07775 88 IEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYG-----AA 162 (274)
T ss_pred CCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHH-----HH
Confidence 7999987210 0 00 112334567899999987765443222222 24
Q ss_pred HHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
|...|.+++ ..|++++++|||++.
T Consensus 163 K~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~ 193 (274)
T PRK07775 163 KAGLEAMVTNLQMELEGTGVRASIVHPGPTL 193 (274)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeCCccc
Confidence 444444432 358999999999863
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.48 E-value=4.9e-13 Score=126.66 Aligned_cols=136 Identities=17% Similarity=0.145 Sum_probs=95.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch----hhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.+.|+|+||||+||||++|+++|+++|++|++++|..... .... ...++++.+|+.+. .+.++|+|||+.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlA 192 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLA 192 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECc
Confidence 3458999999999999999999999999999999853221 1111 23577888888764 356899999872
Q ss_pred c-----h-----------------HHHHHHHhCCCCEEEEecccccccCCCC--c--------ccccchhHH-HHHHHHH
Q 024643 172 E-----G-----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I--------QALMKGNAR-KLAEQDE 218 (265)
Q Consensus 172 ~-----~-----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~--------~~~~~~~~~-~~k~~~E 218 (265)
. . .+.++|++.++ +||++||..+|..... . .+..+...| ..|..+|
T Consensus 193 a~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE 271 (436)
T PLN02166 193 CPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE 271 (436)
T ss_pred eeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHH
Confidence 1 0 13345667775 8999999999864311 0 122222223 4788888
Q ss_pred HHHHh----CCCCEEEEeCCCccC
Q 024643 219 SMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 219 ~~l~~----~gl~~tivRPg~l~~ 238 (265)
+++.. .+++++++||+.+..
T Consensus 272 ~~~~~y~~~~~l~~~ilR~~~vYG 295 (436)
T PLN02166 272 TLAMDYHRGAGVEVRIARIFNTYG 295 (436)
T ss_pred HHHHHHHHHhCCCeEEEEEccccC
Confidence 87654 589999999987543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=8.4e-13 Score=113.83 Aligned_cols=141 Identities=19% Similarity=0.224 Sum_probs=94.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---C--CccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
++++|+||||+|+||++++++|+++|++|++++|++.+..... . ..++++++|+.|.+++.++++ .+|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4588999999999999999999999999999999886544321 1 467889999999998887665 689
Q ss_pred EEEEcCch-------------H-------------HHHHHH---hCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 166 SIICPSEG-------------F-------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 166 ~vi~~~~~-------------~-------------~~~aa~---~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
++|++... + +..++. ..+.+++|++||.....+......|...+.. ...
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~ 164 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFS 164 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHH
Confidence 99986210 0 111111 2355789999998765433222222221110 011
Q ss_pred HHHHHHHHhCCCCEEEEeCCCccC
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
......++..|++++++|||++.+
T Consensus 165 ~~~~~~~~~~gi~v~~v~pg~~~t 188 (237)
T PRK07326 165 EAAMLDLRQYGIKVSTIMPGSVAT 188 (237)
T ss_pred HHHHHHhcccCcEEEEEeeccccC
Confidence 112222345799999999998744
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=7e-13 Score=121.47 Aligned_cols=138 Identities=18% Similarity=0.201 Sum_probs=104.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcc--h--hhh--cCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRN--A--MES--FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~--~--~~~--~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+.+++||||+||+|++|+++|++++ .+|++++..+.. . +.. ....++.+.+|+.|...+.++++++ .|+|
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh 81 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVH 81 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEE
Confidence 46789999999999999999999998 899999887642 1 111 2567899999999999999999999 5554
Q ss_pred c-C---c------------------hHHHHHHHhCCCCEEEEecccccccCCCC-c-----ccccch--hHH-HHHHHHH
Q 024643 170 P-S---E------------------GFISNAGSLKGVQHVILLSQLSVYRGSGG-I-----QALMKG--NAR-KLAEQDE 218 (265)
Q Consensus 170 ~-~---~------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~-~-----~~~~~~--~~~-~~k~~~E 218 (265)
+ . + ..+.++|.+.+++++||+||..+...... . .++... ..| .+|..+|
T Consensus 82 ~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 82 CAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred eccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 4 1 1 12667799999999999999998644322 1 111111 122 5889999
Q ss_pred HHHHhC----CCCEEEEeCCCc
Q 024643 219 SMLMAS----GIPYTIIRTGVL 236 (265)
Q Consensus 219 ~~l~~~----gl~~tivRPg~l 236 (265)
+++.+. ++.++++||..+
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~I 183 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGI 183 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccc
Confidence 998763 388999999975
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=6.8e-13 Score=120.12 Aligned_cols=141 Identities=16% Similarity=0.106 Sum_probs=95.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.++... ..+.++.+|++|.+++.++++ .+|++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 356899999999999999999999999999999999876543321 247899999999998887663 58999
Q ss_pred EEcCc-----------hH-----------------HHHHHHhCCCCEEEEecccccccCCCC------cccccchhHH-H
Q 024643 168 ICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG------IQALMKGNAR-K 212 (265)
Q Consensus 168 i~~~~-----------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~------~~~~~~~~~~-~ 212 (265)
|++.+ .+ +...+++.+..+||++||.+....... ..++.....| .
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 183 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQ 183 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHH
Confidence 98621 00 111244555679999999754321100 0111111222 3
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 184 SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~ 215 (315)
T PRK06196 184 SKTANALFAVHLDKLGKDQGVRAFSVHPGGIL 215 (315)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEeeCCccc
Confidence 45444333 33468999999999874
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.4e-12 Score=112.59 Aligned_cols=140 Identities=16% Similarity=0.185 Sum_probs=103.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---C-CccEEeeeCCCCHHHHHHHH-------cCCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G-TYVESMAGDASNKKFLKTAL-------RGVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~-~~v~~i~~D~~d~~~l~~~~-------~~~d~ 166 (265)
..|.++|||||++||.++++.|+++|++|++..|+.++++++. + ..+..+..|++|++++.+++ ..+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4588999999999999999999999999999999999877663 2 35788999999998866555 46899
Q ss_pred EEEcCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHH
Q 024643 167 IICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 214 (265)
Q Consensus 167 vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k 214 (265)
+|+..+ .+ +...|.+.+..+||.+||.+...+.+..+-|...+. ....
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs 164 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFS 164 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHH
Confidence 997621 10 111256677779999999987655544444444333 1233
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...++.+...++++|.|-||.+.
T Consensus 165 ~~LR~e~~g~~IRVt~I~PG~v~ 187 (246)
T COG4221 165 LGLRQELAGTGIRVTVISPGLVE 187 (246)
T ss_pred HHHHHHhcCCCeeEEEecCceec
Confidence 44455566689999999999873
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.8e-13 Score=120.07 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=96.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhh------cCCccEEeeeCCCCHHHHHHHHcC--C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTALRG--V 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~------~~~~v~~i~~D~~d~~~l~~~~~~--~ 164 (265)
++++|+||||+||||++++++|+++|++|++++|+... .+.+ .+..++++.+|+.|.+.+.++++. +
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 46889999999999999999999999999999987532 2111 123578999999999999998875 6
Q ss_pred CEEEEcCc----h------------------HHHHHHHhCCCC-----EEEEecccccccCCCCc----ccccchhHH-H
Q 024643 165 RSIICPSE----G------------------FISNAGSLKGVQ-----HVILLSQLSVYRGSGGI----QALMKGNAR-K 212 (265)
Q Consensus 165 d~vi~~~~----~------------------~~~~aa~~~gv~-----r~V~iSS~~v~~~~~~~----~~~~~~~~~-~ 212 (265)
|+|||+.. . .+.++++..+++ +||++||..+|...... .+..+...| .
T Consensus 85 d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~ 164 (340)
T PLN02653 85 DEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAV 164 (340)
T ss_pred CEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHH
Confidence 99998721 0 023345556664 89999999888653211 111122233 4
Q ss_pred HHHHHHHHHHh----CCCCEEEEeCC
Q 024643 213 LAEQDESMLMA----SGIPYTIIRTG 234 (265)
Q Consensus 213 ~k~~~E~~l~~----~gl~~tivRPg 234 (265)
.|..+|.+++. .+++++..|+.
T Consensus 165 sK~~~e~~~~~~~~~~~~~~~~~~~~ 190 (340)
T PLN02653 165 AKVAAHWYTVNYREAYGLFACNGILF 190 (340)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEeeec
Confidence 78888887643 57776666654
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=113.28 Aligned_cols=140 Identities=16% Similarity=0.168 Sum_probs=95.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||.+++++|+++|++|++++|+.++.+.+ .+..+.++.+|+.|++++.++++ .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467999999999999999999999999999999987665433 13457889999999998887765 67
Q ss_pred CEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEeccccccc-CCCCcccccchhHH-
Q 024643 165 RSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNAR- 211 (265)
Q Consensus 165 d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~-~~~~~~~~~~~~~~- 211 (265)
|++|++.+ .+ +...+++.+.++||++||...+. ..+....|..++..
T Consensus 85 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 164 (254)
T PRK07478 85 DIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGL 164 (254)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHH
Confidence 99997621 10 01124455667999999986653 22222223222211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~PG~v~ 191 (254)
T PRK07478 165 IGLTQVLAAEYGAQGIRVNALLPGGTD 191 (254)
T ss_pred HHHHHHHHHHHhhcCEEEEEEeeCccc
Confidence 11112222334468999999999974
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.9e-12 Score=111.38 Aligned_cols=128 Identities=15% Similarity=0.161 Sum_probs=91.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc------CCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~------~~d~vi~~~~ 172 (265)
.++++||||+|+||++++++|+++|++|++++|+.... ...+++.+|++|.+++.++++ ++|.+|++..
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 57899999999999999999999999999999987541 123678999999998887765 5799998611
Q ss_pred -----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH---
Q 024643 173 -----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES--- 219 (265)
Q Consensus 173 -----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~--- 219 (265)
.+ +...+++.+.++||++||...+... ...+|. ..|...+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~Y~-----~sK~a~~~~~~ 151 (234)
T PRK07577 78 IALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIFGAL-DRTSYS-----AAKSALVGCTR 151 (234)
T ss_pred CCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccccCCC-CchHHH-----HHHHHHHHHHH
Confidence 00 1122455677899999998765322 112222 23333332
Q ss_pred ----HHHhCCCCEEEEeCCCcc
Q 024643 220 ----MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ----~l~~~gl~~tivRPg~l~ 237 (265)
.+...|+++++||||++.
T Consensus 152 ~~a~e~~~~gi~v~~i~pg~~~ 173 (234)
T PRK07577 152 TWALELAEYGITVNAVAPGPIE 173 (234)
T ss_pred HHHHHHHhhCcEEEEEecCccc
Confidence 344579999999999874
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.2e-12 Score=112.94 Aligned_cols=134 Identities=16% Similarity=0.208 Sum_probs=94.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-------cCCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-------~~~d~vi 168 (265)
+..+++++||||+|+||++++++|+++|++|++++|+.... ....+.++.+|+.|.+++.+++ ..+|.+|
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34578999999999999999999999999999999986542 2346888999999998877554 3579999
Q ss_pred EcCch---------------H-----------------HHHHHHhCCCCEEEEecccccccCCC-CcccccchhHHHHHH
Q 024643 169 CPSEG---------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNARKLAE 215 (265)
Q Consensus 169 ~~~~~---------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~-~~~~~~~~~~~~~k~ 215 (265)
++.+. + +...+++.+.++||++||...+.+.. ....|.. .|.
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~-----sK~ 157 (260)
T PRK06523 83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAA-----AKA 157 (260)
T ss_pred ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHH-----HHH
Confidence 76210 0 01113445667999999987764422 2222222 333
Q ss_pred HHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 216 QDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..+. .+...|+++++|+||++.
T Consensus 158 a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~ 186 (260)
T PRK06523 158 ALSTYSKSLSKEVAPKGVRVNTVSPGWIE 186 (260)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 3333 334478999999999874
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-12 Score=114.71 Aligned_cols=135 Identities=14% Similarity=0.154 Sum_probs=95.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c----CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F----GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~----~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+++++||||+|+||+++++.|+++|++|++++|+.++.... . +..+.++.+|+.|++++.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987554322 1 2457888999999998887765
Q ss_pred CCCEEEEcCc------hH---------------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSE------GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~------~~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.. .+ +.. .+.+.+.++||++||...+...+....|.
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~----- 160 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG----- 160 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH-----
Confidence 6799998721 00 011 12234456999999988765443322222
Q ss_pred HHHHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
..|...|.+++ ..++++++||||++.
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~ 193 (276)
T PRK05875 161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIR 193 (276)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCccC
Confidence 24444444443 368999999999863
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.8e-12 Score=113.30 Aligned_cols=142 Identities=15% Similarity=0.134 Sum_probs=95.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.... .+..+..+.+|++|++++.++++ .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3567999999999999999999999999999999987654332 13357788999999998887664 4
Q ss_pred CCEEEEcCc-----hH---------------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSE-----GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~-----~~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|.+|++.+ .+ +.. .+...+.++||++||.....+......|...+..
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 166 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVK 166 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHH
Confidence 799998721 00 011 1333556799999998664433332233222211
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
...+.....+...|+++++|+||++..
T Consensus 167 ~~~~~la~e~~~~gi~v~~v~pG~~~t 193 (254)
T PRK08085 167 MLTRGMCVELARHNIQVNGIAPGYFKT 193 (254)
T ss_pred HHHHHHHHHHHhhCeEEEEEEeCCCCC
Confidence 111222223344799999999998743
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-12 Score=119.88 Aligned_cols=138 Identities=14% Similarity=0.100 Sum_probs=93.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCC--cchhh---hc-CCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK--RNAME---SF-GTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~--~~~~~---~~-~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|+|+||||+||||++++++|+++|++ |+++.+.. ..... +. ...++++.+|+.|.+++.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999999999999999999976 54454432 11111 11 2357789999999999999996 48999987
Q ss_pred Cch----------------------HHHHHHHhC---------CCCEEEEecccccccCCC-----------C-c---cc
Q 024643 171 SEG----------------------FISNAGSLK---------GVQHVILLSQLSVYRGSG-----------G-I---QA 204 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~---------gv~r~V~iSS~~v~~~~~-----------~-~---~~ 204 (265)
... .+.++|... ++++||++||..+|.... + . .+
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~ 160 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTA 160 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCC
Confidence 210 023334432 467999999998876421 0 0 11
Q ss_pred ccchhHH-HHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 205 LMKGNAR-KLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~~-~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
+.+...| ..|..+|.+++ ..+++++++||+.+.
T Consensus 161 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~ 198 (352)
T PRK10084 161 YAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNY 198 (352)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccee
Confidence 1222233 47888887664 368999999998754
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=113.87 Aligned_cols=132 Identities=18% Similarity=0.165 Sum_probs=94.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--------CCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--------GVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--------~~d~vi~~~ 171 (265)
++|+||||+|+||+++++.|+++|++|++++|+.++.+.....+++.+++|+.|.+++.++++ .+|.++++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 579999999999999999999999999999999877655444568889999999988766553 346667651
Q ss_pred c-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH--
Q 024643 172 E-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES-- 219 (265)
Q Consensus 172 ~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~-- 219 (265)
+ . + +...+++.+.+++|++||.....+......|. ..|...|.
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~-----~sK~~~~~~~ 157 (256)
T PRK08017 83 GFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA-----ASKYALEAWS 157 (256)
T ss_pred CCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHH-----HHHHHHHHHH
Confidence 1 0 0 12335566778999999976554333222222 24444443
Q ss_pred -----HHHhCCCCEEEEeCCCc
Q 024643 220 -----MLMASGIPYTIIRTGVL 236 (265)
Q Consensus 220 -----~l~~~gl~~tivRPg~l 236 (265)
++...++++++++||.+
T Consensus 158 ~~l~~~~~~~~i~v~~v~pg~~ 179 (256)
T PRK08017 158 DALRMELRHSGIKVSLIEPGPI 179 (256)
T ss_pred HHHHHHHhhcCCEEEEEeCCCc
Confidence 34457899999999976
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.3e-12 Score=114.29 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=93.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc----CCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..++++++||||+|+||++++++|+++|++|++++|+.+....+. ...+.++.+|+.|++++.++++ ++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 346789999999999999999999999999999999876544321 1246889999999998877664 68
Q ss_pred CEEEEcCchH---------------------------HHH----HHHhCCC-CEEEEecccccccCCCCcccccchhHHH
Q 024643 165 RSIICPSEGF---------------------------ISN----AGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 165 d~vi~~~~~~---------------------------~~~----aa~~~gv-~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
|.||++.+.. +.+ .++..+. ++|+++||.......+....|..
T Consensus 88 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~----- 162 (264)
T PRK12829 88 DVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA----- 162 (264)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH-----
Confidence 9999872100 111 1234455 67888888665433322222222
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...|.+ +...+++++++|||++.
T Consensus 163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~ 194 (264)
T PRK12829 163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVR 194 (264)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcC
Confidence 33333333 33468999999999873
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-12 Score=111.54 Aligned_cols=134 Identities=20% Similarity=0.246 Sum_probs=93.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
+++++||||+|+||++++++|+++|++|++++|+.++..... +..+.++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999876544321 3467889999999988876654 5
Q ss_pred CCEEEEcCc-----h------------H-------------HHHHHHhCCCCEEEEecccccccCCCC-cccccchhHHH
Q 024643 164 VRSIICPSE-----G------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGG-IQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~-----~------------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~-~~~~~~~~~~~ 212 (265)
+|.+|++.+ . + +...+++.+.++||++||.......+. ...|. .
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~-----~ 156 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYA-----A 156 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHH-----H
Confidence 899998621 0 0 011234567789999999766443321 12222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...++++++++||++.
T Consensus 157 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~ 188 (248)
T PRK08251 157 SKAGVASLGEGLRAELAKTPIKVSTIEPGYIR 188 (248)
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEecCcCc
Confidence 34333332 23468999999999974
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.2e-12 Score=110.80 Aligned_cols=135 Identities=16% Similarity=0.150 Sum_probs=94.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|++++.... .+..+.++.+|+.|++++.++++ .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999987654332 13458889999999999887763 58
Q ss_pred CEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+. + +. ..+.+.+.++||++||...+.+......|.. .|
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~-----sK 160 (250)
T PRK12939 86 DGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVA-----SK 160 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHH-----HH
Confidence 999987210 0 11 1133445569999999776544332222222 33
Q ss_pred HHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 215 EQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...+.+ +...++++++|+||++.
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~ 190 (250)
T PRK12939 161 GAVIGMTRSLARELGGRGITVNAIAPGLTA 190 (250)
T ss_pred HHHHHHHHHHHHHHhhhCEEEEEEEECCCC
Confidence 333332 33478999999999863
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-12 Score=113.33 Aligned_cols=134 Identities=10% Similarity=0.121 Sum_probs=93.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|+....+.+ .+..+.++.+|++|.+++.++++ .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999999999999999987654332 13457889999999998876663 57
Q ss_pred CEEEEcCc---h---H---------------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 165 RSIICPSE---G---F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 d~vi~~~~---~---~---------------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
|++|++.. . + +..+ +++. .++||++||.....+..+...|.. .
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~-----s 157 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKM-----A 157 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHH-----H
Confidence 99998721 0 0 1111 1222 259999999877654433323322 3
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...++++++++||++.
T Consensus 158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~ 188 (258)
T PRK07890 158 KGALLAASQSLATELGPQGIRVNSVAPGYIW 188 (258)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeCCccC
Confidence 3333332 33468999999999863
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.8e-12 Score=115.27 Aligned_cols=141 Identities=18% Similarity=0.159 Sum_probs=95.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++.+|+.++.++. .+..+.++.+|++|.+++.++++ .
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3467899999999999999999999999999999987654432 13357788999999999887764 4
Q ss_pred CCEEEEcCc-----h--------H-------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHH-
Q 024643 164 VRSIICPSE-----G--------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
+|++|++.+ . + +..+ +.+.+ .++||++||..++.+.++...|...+..
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 163 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV 163 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHH
Confidence 799998621 0 0 0111 23344 4799999998876554433333322211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.........+...|+++++|+||++.
T Consensus 164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 190 (275)
T PRK05876 164 VGLAETLAREVTADGIGVSVLCPMVVE 190 (275)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence 11112222234579999999999874
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.6e-13 Score=119.89 Aligned_cols=132 Identities=14% Similarity=0.089 Sum_probs=87.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HH-HHHHHc-----CCCEEEEcCc
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KF-LKTALR-----GVRSIICPSE 172 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~-l~~~~~-----~~d~vi~~~~ 172 (265)
|+||||+||||++|+++|+++|++++++.|+....... .....+|+.|. +. +.++++ ++|+|||+..
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~ 77 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF----VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGA 77 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH----HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECce
Confidence 89999999999999999999999888777765332111 12234565554 33 233332 6899998721
Q ss_pred --------h------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHHHh---
Q 024643 173 --------G------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESMLMA--- 223 (265)
Q Consensus 173 --------~------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l~~--- 223 (265)
. .+.++|++.++ +||++||..+|..... . .+..+...| ..|..+|++++.
T Consensus 78 ~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~ 156 (308)
T PRK11150 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILP 156 (308)
T ss_pred ecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0 13455777787 6999999998875321 1 111122223 477777876654
Q ss_pred -CCCCEEEEeCCCccC
Q 024643 224 -SGIPYTIIRTGVLQN 238 (265)
Q Consensus 224 -~gl~~tivRPg~l~~ 238 (265)
.+++++++||+++..
T Consensus 157 ~~~~~~~~lR~~~vyG 172 (308)
T PRK11150 157 EANSQICGFRYFNVYG 172 (308)
T ss_pred HcCCCEEEEeeeeecC
Confidence 689999999998653
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-12 Score=112.19 Aligned_cols=141 Identities=14% Similarity=0.170 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh---h--cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---S--FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~--~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+. + .+..+.++.+|++|++++.++++ .+
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 456899999999999999999999999999999998765411 1 24468899999999999887775 57
Q ss_pred CEEEEcCch------------H-------------HHHHH---HhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 165 RSIICPSEG------------F-------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 165 d~vi~~~~~------------~-------------~~~aa---~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
|.+|++.+. + +...+ ...+.++||++||.....+......|..++.. ...
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (258)
T PRK08628 85 DGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALT 164 (258)
T ss_pred CEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHH
Confidence 999987220 0 00111 11234789999998776543333233222211 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.....+...+++++.|+||.+.
T Consensus 165 ~~l~~e~~~~~i~v~~v~pg~v~ 187 (258)
T PRK08628 165 REWAVALAKDGVRVNAVIPAEVM 187 (258)
T ss_pred HHHHHHHhhcCeEEEEEecCccC
Confidence 12222334578999999999863
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.46 E-value=3e-12 Score=111.34 Aligned_cols=137 Identities=13% Similarity=0.106 Sum_probs=94.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC-------CCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-------VRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~-------~d~vi~ 169 (265)
..+++++||||+|+||+.++++|+++|++|++++|+. . ...+..++++++|+.|.+++.++++. +|++|+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4568999999999999999999999999999999986 1 12345688999999999998887753 799998
Q ss_pred cCch-------------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHHH
Q 024643 170 PSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 217 (265)
Q Consensus 170 ~~~~-------------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~ 217 (265)
+... + +..+ +++.+.++||++||.....+......|...+.. ...+..
T Consensus 83 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 83 AAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCV 162 (252)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHH
Confidence 7110 0 1111 334566799999998765443333233222211 111222
Q ss_pred HHHHHhCCCCEEEEeCCCc
Q 024643 218 ESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l 236 (265)
...+...++++++++||++
T Consensus 163 a~e~~~~~i~v~~i~pg~v 181 (252)
T PRK08220 163 GLELAPYGVRCNVVSPGST 181 (252)
T ss_pred HHHhhHhCeEEEEEecCcC
Confidence 2333447899999999986
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.7e-12 Score=110.26 Aligned_cols=140 Identities=16% Similarity=0.224 Sum_probs=93.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC----cchhhh------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK----RNAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~----~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
++|+++||||+|+||++++++|+++|++|+++.|.. +..... .+..++++.+|+.|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999977642 222111 13467899999999999887763
Q ss_pred --CCCEEEEcCch-------------H-------------HHHHHH-----hCCCCEEEEecccccccCCCCcccccchh
Q 024643 163 --GVRSIICPSEG-------------F-------------ISNAGS-----LKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 --~~d~vi~~~~~-------------~-------------~~~aa~-----~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|.+|++.+. + +..++. +.+.++||++||...+........|...+
T Consensus 85 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK 164 (249)
T PRK12827 85 FGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASK 164 (249)
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHH
Confidence 58999987210 0 111222 45678999999987765443333332222
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.. .........+...+++++++|||++.
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~ 194 (249)
T PRK12827 165 AGLIGLTKTLANELAPRGITVNAVAPGAIN 194 (249)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEEECCcC
Confidence 11 01111222233468999999999974
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.6e-12 Score=115.09 Aligned_cols=133 Identities=14% Similarity=0.102 Sum_probs=94.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~~~ 171 (265)
+++++||||+|+||++++++|+++|++|++++|+.++...+...+++++.+|++|.+++.++++ .+|++|++.
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 3689999999999999999999999999999999876665544567889999999998877663 579999872
Q ss_pred c-----h--------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH--
Q 024643 172 E-----G--------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES-- 219 (265)
Q Consensus 172 ~-----~--------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~-- 219 (265)
+ . + +..+ ++ .+.+++|++||.......+....|.. .|...+.
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~Y~~-----sK~al~~~~ 154 (274)
T PRK05693 81 GYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR-RSRGLVVNIGSVSGVLVTPFAGAYCA-----SKAAVHALS 154 (274)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-hcCCEEEEECCccccCCCCCccHHHH-----HHHHHHHHH
Confidence 1 0 0 1111 22 34478999999776544332222222 3333222
Q ss_pred -----HHHhCCCCEEEEeCCCcc
Q 024643 220 -----MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 -----~l~~~gl~~tivRPg~l~ 237 (265)
++...|+++++++||.+.
T Consensus 155 ~~l~~e~~~~gi~v~~v~pg~v~ 177 (274)
T PRK05693 155 DALRLELAPFGVQVMEVQPGAIA 177 (274)
T ss_pred HHHHHHhhhhCeEEEEEecCccc
Confidence 234479999999999873
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.9e-12 Score=113.97 Aligned_cols=139 Identities=18% Similarity=0.214 Sum_probs=94.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.+++ .+..+.++++|++|.+++.++++ .+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999999999999999987654433 24468899999999998877664 47999
Q ss_pred EEcCch------------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHH
Q 024643 168 ICPSEG------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (265)
Q Consensus 168 i~~~~~------------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~ 216 (265)
|++.+. + + ...++ .+..+||++||............|...+.. ...+.
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~ 163 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRS 163 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHH
Confidence 986210 0 0 11122 344699999998765443332233222211 11122
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+...|+++++|+||++.
T Consensus 164 la~e~~~~gi~vn~v~PG~~~ 184 (261)
T PRK08265 164 MAMDLAPDGIRVNSVSPGWTW 184 (261)
T ss_pred HHHHhcccCEEEEEEccCCcc
Confidence 222334478999999999863
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.3e-12 Score=109.49 Aligned_cols=140 Identities=16% Similarity=0.229 Sum_probs=92.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+|+||+++++.|+++|++|+++.|+..+ ... + .+..+.++.+|+.|.+++.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999888887643 111 1 23467888999999998887665 5
Q ss_pred CCEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|.+||+.+. + +. ..+.+.+.++||++||............|...+..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~ 163 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVI 163 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHH
Confidence 7999987210 0 11 11334567799999997554433322222222110
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.......+.+...++++++++||++.
T Consensus 164 ~~~~~~a~~~~~~~i~~~~v~pg~~~ 189 (248)
T PRK05557 164 GFTKSLARELASRGITVNAVAPGFIE 189 (248)
T ss_pred HHHHHHHHHhhhhCeEEEEEecCccC
Confidence 01112222334568999999999873
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.5e-12 Score=111.25 Aligned_cols=136 Identities=19% Similarity=0.220 Sum_probs=95.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHc---CCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALR---GVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~ 172 (265)
..+++++||||+|+||+++++.|+++|++|++++|+.++.+++.. .+..++.+|++|.+++.++++ .+|++|++.+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 346799999999999999999999999999999998866544322 246788999999998888775 4799998721
Q ss_pred -------------hH-------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHHHHHHHHHHH-
Q 024643 173 -------------GF-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM- 220 (265)
Q Consensus 173 -------------~~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~- 220 (265)
.+ +..+ +.+.+ .++||++||...+.+......|. ..|..+|.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~-----~sK~a~~~~~ 161 (245)
T PRK07060 87 IASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYC-----ASKAALDAIT 161 (245)
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhH-----HHHHHHHHHH
Confidence 00 1111 22233 47999999987765443322322 234333333
Q ss_pred ------HHhCCCCEEEEeCCCcc
Q 024643 221 ------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 ------l~~~gl~~tivRPg~l~ 237 (265)
+...+++++.+|||++.
T Consensus 162 ~~~a~~~~~~~i~v~~v~pg~v~ 184 (245)
T PRK07060 162 RVLCVELGPHGIRVNSVNPTVTL 184 (245)
T ss_pred HHHHHHHhhhCeEEEEEeeCCCC
Confidence 23468999999999874
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.8e-12 Score=111.03 Aligned_cols=142 Identities=15% Similarity=0.146 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh---hhcCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+..... ......+..+.+|++|++++.++++ .+|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 45789999999999999999999999999999999875422 1223456789999999998877664 5799
Q ss_pred EEEcCch-----H---------------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 167 IICPSEG-----F---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 167 vi~~~~~-----~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
+|++.+. + +.. .+++.+.++||++||.....+......|...+.. ...
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 172 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMT 172 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHH
Confidence 9987210 0 111 1334567899999998764433322233222211 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCccC
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
+.....+...|++++.|+||++..
T Consensus 173 ~~la~e~~~~gi~v~~v~pg~v~t 196 (255)
T PRK06841 173 KVLALEWGPYGITVNAISPTVVLT 196 (255)
T ss_pred HHHHHHHHhhCeEEEEEEeCcCcC
Confidence 122222334789999999998743
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.45 E-value=5.9e-13 Score=119.43 Aligned_cols=124 Identities=17% Similarity=0.157 Sum_probs=88.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCc----h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE----G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~----~ 173 (265)
|+||||||+|+||++|.++|.++|++|+.+.|+ ..|+.|.+.+.+.++. .|+||++.. .
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~ 65 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFKPDVVINCAAYTNVD 65 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence 799999999999999999999999999998665 5799999999998864 799998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHHhCCCCEE
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLMASGIPYT 229 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~~~gl~~t 229 (265)
.+.++|...|. ++||+||..++...... .+..+...| ..|.++|+.+++..-+++
T Consensus 66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~~~~~~~ 144 (286)
T PF04321_consen 66 ACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRAACPNAL 144 (286)
T ss_dssp HHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHHH-SSEE
T ss_pred hhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHHhcCCEE
Confidence 13334556664 89999999998654221 122223334 589999999998666999
Q ss_pred EEeCCCccCC
Q 024643 230 IIRTGVLQNT 239 (265)
Q Consensus 230 ivRPg~l~~~ 239 (265)
|+|++++.+.
T Consensus 145 IlR~~~~~g~ 154 (286)
T PF04321_consen 145 ILRTSWVYGP 154 (286)
T ss_dssp EEEE-SEESS
T ss_pred EEecceeccc
Confidence 9999997554
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=3.8e-12 Score=110.59 Aligned_cols=134 Identities=17% Similarity=0.124 Sum_probs=91.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHcC----CCEEEEcCc-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALRG----VRSIICPSE- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~~----~d~vi~~~~- 172 (265)
++++||||+|+||++++++|+++|++|++++|+.++.+++. ...+.++.+|++|.+++.++++. .|.++++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 67999999999999999999999999999999987665442 24588899999999999988865 356654411
Q ss_pred ----h------------H---------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH------
Q 024643 173 ----G------------F---------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES------ 219 (265)
Q Consensus 173 ----~------------~---------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~------ 219 (265)
. + +..++.. .+.+++|++||.....+.+....|.. .|..++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a-----sK~a~~~~~~~l~ 156 (240)
T PRK06101 82 CEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGA-----SKAAVAYFARTLQ 156 (240)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhH-----HHHHHHHHHHHHH
Confidence 0 0 0111111 12358999998765443332223322 3333333
Q ss_pred -HHHhCCCCEEEEeCCCccC
Q 024643 220 -MLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 220 -~l~~~gl~~tivRPg~l~~ 238 (265)
.+..+|+++++++||++..
T Consensus 157 ~e~~~~gi~v~~v~pg~i~t 176 (240)
T PRK06101 157 LDLRPKGIEVVTVFPGFVAT 176 (240)
T ss_pred HHHHhcCceEEEEeCCcCCC
Confidence 3355799999999998743
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.1e-12 Score=111.73 Aligned_cols=131 Identities=12% Similarity=0.139 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+++++||||+|+||++++++|+++|++|++++|+.... ..+.++++|++|++++.++++ .+|.+|+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3568999999999999999999999999999999986532 257889999999998877664 5899998
Q ss_pred cCc-------------hH-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 170 PSE-------------GF-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 170 ~~~-------------~~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
+.+ .+ + ...+++.+.++||++||...+.+......|.. .|...+.
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-----sKaal~~ 153 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVT-----SKHAVLG 153 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhh-----hHHHHHH
Confidence 621 00 1 11134456689999999887654433333333 3333333
Q ss_pred HHH----h--CCCCEEEEeCCCcc
Q 024643 220 MLM----A--SGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l~----~--~gl~~tivRPg~l~ 237 (265)
+.+ + ..++++.|+||++.
T Consensus 154 ~~~~la~e~~~~i~vn~i~PG~v~ 177 (258)
T PRK06398 154 LTRSIAVDYAPTIRCVAVCPGSIR 177 (258)
T ss_pred HHHHHHHHhCCCCEEEEEecCCcc
Confidence 322 1 24999999999873
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.2e-12 Score=124.01 Aligned_cols=142 Identities=15% Similarity=0.222 Sum_probs=100.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcc------hh-hh-----c---------------CCccEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRN------AM-ES-----F---------------GTYVES 146 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~------~~-~~-----~---------------~~~v~~ 146 (265)
-.+++|+|||||||+|++|++.|+..+ .+|+++.|.... .. ++ + ...+++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 356899999999999999999999865 368999997632 11 10 0 146899
Q ss_pred eeeCCC-------CHHHHHHHHcCCCEEEEcCch-------------------HHHHHHHhC-CCCEEEEecccccccCC
Q 024643 147 MAGDAS-------NKKFLKTALRGVRSIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRGS 199 (265)
Q Consensus 147 i~~D~~-------d~~~l~~~~~~~d~vi~~~~~-------------------~~~~aa~~~-gv~r~V~iSS~~v~~~~ 199 (265)
+.+|++ |.+.+.++++++|+|||+... .+.++++.. ++++||++||..+|+..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~ 168 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK 168 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence 999998 555677888999999987210 133445553 78999999999988542
Q ss_pred CCc------c------------c--------------------------------------c-cchhHHHHHHHHHHHHH
Q 024643 200 GGI------Q------------A--------------------------------------L-MKGNARKLAEQDESMLM 222 (265)
Q Consensus 200 ~~~------~------------~--------------------------------------~-~~~~~~~~k~~~E~~l~ 222 (265)
.+. . . . .+..+..+|..+|+++.
T Consensus 169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~ 248 (491)
T PLN02996 169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG 248 (491)
T ss_pred CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence 110 0 0 0 01112348889999987
Q ss_pred h--CCCCEEEEeCCCccC
Q 024643 223 A--SGIPYTIIRTGVLQN 238 (265)
Q Consensus 223 ~--~gl~~tivRPg~l~~ 238 (265)
+ .+++++++||+.+..
T Consensus 249 ~~~~~lpv~i~RP~~V~G 266 (491)
T PLN02996 249 NFKENLPLVIIRPTMITS 266 (491)
T ss_pred HhcCCCCEEEECCCEecc
Confidence 6 589999999998744
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-12 Score=109.55 Aligned_cols=140 Identities=12% Similarity=0.160 Sum_probs=95.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++++||||+|+||+++++.|+++|+.|++..|+.++.+.+ .+..++++.+|++|.+++.++++ .+|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467999999999999999999999999999988887655433 23468889999999998877653 58999
Q ss_pred EEcCch-------------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhH--HHHHH
Q 024643 168 ICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 215 (265)
Q Consensus 168 i~~~~~-------------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~ 215 (265)
|++.+. + +..+ +...+.++||++||.......+....|...+. ....+
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~ 164 (245)
T PRK12936 85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSK 164 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHH
Confidence 987210 0 1111 22346679999999766544332223322221 11112
Q ss_pred HHHHHHHhCCCCEEEEeCCCcc
Q 024643 216 QDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.....+...++++++++||++.
T Consensus 165 ~la~~~~~~~i~v~~i~pg~~~ 186 (245)
T PRK12936 165 SLAQEIATRNVTVNCVAPGFIE 186 (245)
T ss_pred HHHHHhhHhCeEEEEEEECcCc
Confidence 2223344578999999999863
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.3e-12 Score=110.85 Aligned_cols=139 Identities=16% Similarity=0.193 Sum_probs=92.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++++|++|++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999987554322 13467789999999998877664 579
Q ss_pred EEEEcCch-------------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSEG-------------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~~-------------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
.+|++.+. + +...++..+ ..+||++||.....+.+....|...+.. .
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 161 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG 161 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence 99987210 0 001122222 3589999998765444333233222211 0
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|++++.|+||++.
T Consensus 162 ~~~~la~e~~~~gi~v~~i~Pg~v~ 186 (256)
T PRK08643 162 LTQTAARDLASEGITVNAYAPGIVK 186 (256)
T ss_pred HHHHHHHHhcccCcEEEEEeeCCCc
Confidence 1111222234578999999999863
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.5e-12 Score=111.63 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=96.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+++||++++++|+++|++|+++.|+.++.++. .+.++.++++|++|.+++.++++ .
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3467899999999999999999999999999999987654332 13468889999999999887764 3
Q ss_pred CCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|++|++.+. + ....+++.+.++||++||............|...+..
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~ 167 (265)
T PRK07097 88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLK 167 (265)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHH
Confidence 7999987210 0 1112445567899999997654333322233222211
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+...+.+...|++++.|+||++.
T Consensus 168 ~l~~~la~e~~~~gi~v~~v~Pg~v~ 193 (265)
T PRK07097 168 MLTKNIASEYGEANIQCNGIGPGYIA 193 (265)
T ss_pred HHHHHHHHHhhhcCceEEEEEecccc
Confidence 11122223344579999999999874
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.2e-12 Score=111.85 Aligned_cols=136 Identities=15% Similarity=0.196 Sum_probs=96.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.+..+.+ .+.++.++++|+.|.+++.++++ .
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999987554332 13357889999999988876654 6
Q ss_pred CCEEEEcCch----------------------------H-----------------HHHHHHhCCCCEEEEecccccccC
Q 024643 164 VRSIICPSEG----------------------------F-----------------ISNAGSLKGVQHVILLSQLSVYRG 198 (265)
Q Consensus 164 ~d~vi~~~~~----------------------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~ 198 (265)
+|++|++.+. + +...+.+.+.++||++||...+.+
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 167 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP 167 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence 8999987210 0 011234455679999999988765
Q ss_pred CCCcccccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 199 SGGIQALMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 199 ~~~~~~~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
......|.. .|...+.+ +...|++++.|+||++.
T Consensus 168 ~~~~~~Y~~-----sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~ 208 (278)
T PRK08277 168 LTKVPAYSA-----AKAAISNFTQWLAVHFAKVGIRVNAIAPGFFL 208 (278)
T ss_pred CCCCchhHH-----HHHHHHHHHHHHHHHhCccCeEEEEEEeccCc
Confidence 433323322 33333333 33468999999999874
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-12 Score=115.30 Aligned_cols=137 Identities=18% Similarity=0.204 Sum_probs=102.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-------cchhhhcC--CccEEeeeCCCCHHHHHHHHc--CCCEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAMESFG--TYVESMAGDASNKKFLKTALR--GVRSI 167 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-------~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~--~~d~v 167 (265)
.++||||||+||||++.+.+|+++|+.|++++.=. .+...+.+ ..+.++++|+.|.+.|+++|+ ..|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 46899999999999999999999999999987521 22233334 689999999999999999996 57899
Q ss_pred EEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccc-cchhHH-HHHHHHH
Q 024643 168 ICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QAL-MKGNAR-KLAEQDE 218 (265)
Q Consensus 168 i~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~-~~~~~~-~~k~~~E 218 (265)
+|... + .+.++|++.+++.+|++||+.+|+.+... .+. .+...| ..|..+|
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~iE 161 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAIE 161 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHHH
Confidence 87611 0 14566889999999999999999875322 111 122333 4778888
Q ss_pred HHHHh----CCCCEEEEeCCC
Q 024643 219 SMLMA----SGIPYTIIRTGV 235 (265)
Q Consensus 219 ~~l~~----~gl~~tivRPg~ 235 (265)
+.+.. .+..++.+|...
T Consensus 162 ~i~~d~~~~~~~~~~~LRyfn 182 (343)
T KOG1371|consen 162 EIIHDYNKAYGWKVTGLRYFN 182 (343)
T ss_pred HHHHhhhccccceEEEEEecc
Confidence 88765 457788888764
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.6e-12 Score=110.77 Aligned_cols=136 Identities=15% Similarity=0.236 Sum_probs=93.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-h-hhh--cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-A-MES--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~-~~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
..+++++||||+|+||++++++|+++|++|++++|+... . ... .+..+.++.+|++|.+++.++++ .+|
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356899999999999999999999999999999997521 1 111 23468899999999998876653 589
Q ss_pred EEEEcCc-----h--------H-------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 166 SIICPSE-----G--------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 166 ~vi~~~~-----~--------~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
++|++.+ . + +..+ +...+ .+++|++||...+.+......|.. .|
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~-----sK 157 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTA-----SK 157 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHH-----HH
Confidence 9998721 0 0 0111 22333 569999999877654433323322 33
Q ss_pred HHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 215 EQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...+.+ +...|+++++|+||++.
T Consensus 158 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~ 187 (248)
T TIGR01832 158 HGVAGLTKLLANEWAAKGINVNAIAPGYMA 187 (248)
T ss_pred HHHHHHHHHHHHHhCccCcEEEEEEECcCc
Confidence 333332 23368999999999874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.3e-12 Score=111.81 Aligned_cols=133 Identities=11% Similarity=0.124 Sum_probs=92.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-hhcCCccEEeeeCCCCHHHHHHHHc-----------CCCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-----------GVRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-~~~~~~v~~i~~D~~d~~~l~~~~~-----------~~d~ 166 (265)
+|+++||||+|+||++++++|+++|++|++++|+..+.. ...+.++.++++|+.|.+++.++++ ..|.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 368999999999999999999999999999999865322 1224468889999999998887442 3567
Q ss_pred EEEcCc------h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 167 IICPSE------G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 167 vi~~~~------~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++.+ . + +...+...+.++||++||...+.+..+...| ...|.
T Consensus 81 ~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y-----~~sK~ 155 (243)
T PRK07023 81 LINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVY-----CATKA 155 (243)
T ss_pred EEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHH-----HHHHH
Confidence 776511 0 0 1112344556799999998776543322222 23555
Q ss_pred HHHHHHH------hCCCCEEEEeCCCc
Q 024643 216 QDESMLM------ASGIPYTIIRTGVL 236 (265)
Q Consensus 216 ~~E~~l~------~~gl~~tivRPg~l 236 (265)
..|.+++ ..+++++.|+||++
T Consensus 156 a~~~~~~~~~~~~~~~i~v~~v~pg~~ 182 (243)
T PRK07023 156 ALDHHARAVALDANRALRIVSLAPGVV 182 (243)
T ss_pred HHHHHHHHHHhcCCCCcEEEEecCCcc
Confidence 5555543 35899999999987
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.2e-12 Score=116.26 Aligned_cols=141 Identities=11% Similarity=0.164 Sum_probs=96.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|.+++.++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 3467899999999999999999999999999999987655432 23467889999999999887654 5
Q ss_pred CCEEEEcCch-----H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~~-----~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|.+|++... + +...+++.+.++||++||...+...+....|..++..
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~ 165 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIR 165 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHH
Confidence 8999986210 0 1122455566899999999887654332233222211
Q ss_pred HHHHHHHHHHH--hCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLM--ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~--~~gl~~tivRPg~l~ 237 (265)
........++. ..++++++|+||++.
T Consensus 166 ~~~~~l~~el~~~~~~I~v~~v~Pg~v~ 193 (334)
T PRK07109 166 GFTDSLRCELLHDGSPVSVTMVQPPAVN 193 (334)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCCcc
Confidence 01111112222 257999999999863
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.2e-12 Score=127.56 Aligned_cols=120 Identities=19% Similarity=0.284 Sum_probs=93.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc----h--
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----G-- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----~-- 173 (265)
|+|+||||+||||++|+++|+++||+|++++|..... ...+++++.+|+.|+. +.+++.++|+|||+.+ .
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---~~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~ 76 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---LDPRVDYVCASLRNPV-LQELAGEADAVIHLAPVDTSAPG 76 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---ccCCceEEEccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence 5899999999999999999999999999999875432 2346899999999985 7888899999998721 0
Q ss_pred --------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 174 --------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 174 --------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
.+.++|++.|+ ++||+||... ... .+ ...|.++...+++++++|++++..
T Consensus 77 ~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G--~~~---~~---------~~aE~ll~~~~~p~~ILR~~nVYG 134 (699)
T PRK12320 77 GVGITGLAHVANAAARAGA-RLLFVSQAAG--RPE---LY---------RQAETLVSTGWAPSLVIRIAPPVG 134 (699)
T ss_pred hHHHHHHHHHHHHHHHcCC-eEEEEECCCC--CCc---cc---------cHHHHHHHhcCCCEEEEeCceecC
Confidence 14456778887 7999998632 110 01 146778887889999999998644
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=4.7e-12 Score=110.41 Aligned_cols=135 Identities=18% Similarity=0.141 Sum_probs=91.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh----c--CCccEEeeeCCCCHHHHHHHHc--------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES----F--GTYVESMAGDASNKKFLKTALR-------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~----~--~~~v~~i~~D~~d~~~l~~~~~-------- 162 (265)
.+++++||||+|+||++++++|+++|++|+++ .|+.++.+.. . +..++++.+|++|++++.++++
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 45799999999999999999999999999875 5765443222 1 3457889999999999887765
Q ss_pred -----CCCEEEEcCch-----H---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchh
Q 024643 163 -----GVRSIICPSEG-----F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 -----~~d~vi~~~~~-----~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
++|++|++.+. + +..++.. ...++||++||..++.+..+...|..
T Consensus 85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~-- 162 (254)
T PRK12746 85 RVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGL-- 162 (254)
T ss_pred ccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHh--
Confidence 48999987210 0 0011111 22358999999887654443333322
Q ss_pred HHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...++++++++||++.
T Consensus 163 ---sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~ 194 (254)
T PRK12746 163 ---SKGALNTMTLPLAKHLGERGITVNTIMPGYTK 194 (254)
T ss_pred ---hHHHHHHHHHHHHHHHhhcCcEEEEEEECCcc
Confidence 3333332 233478999999999863
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.8e-12 Score=111.48 Aligned_cols=139 Identities=15% Similarity=0.168 Sum_probs=95.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||.+++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999987654332 13457789999999999876553 5
Q ss_pred CCEEEEcCch-------------H-------------HHHHH-----HhCCCCEEEEecccccccCCCCc-ccccchhHH
Q 024643 164 VRSIICPSEG-------------F-------------ISNAG-----SLKGVQHVILLSQLSVYRGSGGI-QALMKGNAR 211 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~~aa-----~~~gv~r~V~iSS~~v~~~~~~~-~~~~~~~~~ 211 (265)
+|.+|++.+. + +.+++ ...+.++||++||...+....+. .+.. .+.
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~--~Y~ 167 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTI--AYN 167 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcc--hHH
Confidence 7999987210 0 11112 23466799999998765443221 0111 111
Q ss_pred HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...+.++ ...++++++++||++.
T Consensus 168 ~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~ 200 (259)
T PRK08213 168 TSKGAVINFTRALAAEWGPHGIRVNAIAPGFFP 200 (259)
T ss_pred HHHHHHHHHHHHHHHHhcccCEEEEEEecCcCC
Confidence 2444444433 3468999999999874
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.7e-12 Score=111.94 Aligned_cols=141 Identities=15% Similarity=0.181 Sum_probs=95.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------c-CCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~-~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+++||++++++|+++|++|++++|+.++.+.. . +..+..+.+|++|.+++.++++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3568999999999999999999999999999999987654322 1 2357788999999998876553
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|.+|++.+ . + +...+++.+..+||++||.....+.+....|...+.
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaa 165 (265)
T PRK07062 86 GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAG 165 (265)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHH
Confidence 5799998721 0 0 011144455679999999877554332222222111
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|+||++.
T Consensus 166 l~~~~~~la~e~~~~gi~v~~i~PG~v~ 193 (265)
T PRK07062 166 LLNLVKSLATELAPKGVRVNSILLGLVE 193 (265)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 111222233344579999999999873
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.7e-12 Score=110.08 Aligned_cols=143 Identities=14% Similarity=0.142 Sum_probs=97.1
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
....+++++||||+|+||++++++|+++|++|++++|+.+...+. .+..+.++.+|++|++++.++++
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 345678999999999999999999999999999999987654332 23458899999999998877665
Q ss_pred -CCCEEEEcCch-----H---------------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~~-----~---------------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|.+|++... + +. ..+...+.++||++||............|...+..
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 166 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQG 166 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHH
Confidence 35888876110 0 11 12344667899999998765444333233222211
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...+++++.|+||++.
T Consensus 167 ~~~~~~~la~e~~~~~i~v~~i~pg~v~ 194 (256)
T PRK06124 167 LTGLMRALAAEFGPHGITSNAIAPGYFA 194 (256)
T ss_pred HHHHHHHHHHHHHHhCcEEEEEEECCcc
Confidence 11111222234468999999999874
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.43 E-value=5.1e-12 Score=109.81 Aligned_cols=132 Identities=14% Similarity=0.080 Sum_probs=92.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|+.+..... .+..+.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 457899999999999999999999999999999987543322 12356788999999998877664 57
Q ss_pred CEEEEcCch--------H---------------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 165 RSIICPSEG--------F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 165 d~vi~~~~~--------~---------------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
|.+|++.+. + +. ..+...+.++||++||..++... ..|.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~---~~Y~----- 156 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYS---NFYG----- 156 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCCc---cccH-----
Confidence 999987210 0 01 11233456799999998776432 1222
Q ss_pred HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...|.+. ...++++++++||.+.
T Consensus 157 ~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~ 189 (250)
T PRK07774 157 LAKVGLNGLTQQLARELGGMNIRVNAIAPGPID 189 (250)
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecCccc
Confidence 2444444333 2358999999999864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.43 E-value=6.3e-12 Score=111.36 Aligned_cols=134 Identities=15% Similarity=0.103 Sum_probs=93.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+++||++++++|+++|++|++++|+ ++.++. .+.++..+.+|++|++++.++++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 356899999999999999999999999999999998 443322 13457889999999988876654 4
Q ss_pred CCEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|++|++.+ .+ +...+++.+ .+||++||...+.+......|..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a----- 156 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNA----- 156 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHH-----
Confidence 789997611 00 011133444 79999999877654332222222
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|++++.|.||++.
T Consensus 157 sKaal~~l~~~la~e~~~~gI~v~~v~PG~v~ 188 (272)
T PRK08589 157 AKGAVINFTKSIAIEYGRDGIRANAIAPGTIE 188 (272)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 33333333 34478999999999863
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.1e-12 Score=115.83 Aligned_cols=141 Identities=19% Similarity=0.236 Sum_probs=101.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcc------hhh----------hcCCccEEeeeCCC------CHHH
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN------AME----------SFGTYVESMAGDAS------NKKF 156 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~------~~~----------~~~~~v~~i~~D~~------d~~~ 156 (265)
++|++||||||+|.+++..|+.+- .+|++++|..+. +.. ....+++++.+|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999876 599999997641 111 23457999999997 3466
Q ss_pred HHHHHcCCCEEEEcCch-------------------HHHHHHHhCCCCEEEEecccccccCCCCcc--------------
Q 024643 157 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-------------- 203 (265)
Q Consensus 157 l~~~~~~~d~vi~~~~~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~-------------- 203 (265)
..++.+.+|.|||+... .+...|...+.|.+.|+||.++.......+
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~ 160 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNV 160 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccc
Confidence 77888889999997211 133445566678899999999865432110
Q ss_pred -cccchhHHHHHHHHHHHHHh---CCCCEEEEeCCCccCCC
Q 024643 204 -ALMKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNTP 240 (265)
Q Consensus 204 -~~~~~~~~~~k~~~E~~l~~---~gl~~tivRPg~l~~~~ 240 (265)
......+..+|..+|..+++ .|++++|+|||.+....
T Consensus 161 ~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 161 GQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS 201 (382)
T ss_pred cCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence 01112233588888988875 68999999999975433
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=4.5e-12 Score=112.67 Aligned_cols=134 Identities=8% Similarity=0.015 Sum_probs=92.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c--CCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F--GTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~--~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.++++|||||+|+||++++++|+++|++|++++|+.+..... . +..+.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999986544322 1 3357789999999999988776 47
Q ss_pred CEEEEcCch-------------H-----------------HHHHHHhCCC------CEEEEecccccccCCCCcccccch
Q 024643 165 RSIICPSEG-------------F-----------------ISNAGSLKGV------QHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa~~~gv------~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
|++|++.+. + +...+.+.+. +++|++||...+.+.+....|..
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~- 163 (287)
T PRK06194 85 HLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNV- 163 (287)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHH-
Confidence 999987110 0 0011334433 58999999887755433323322
Q ss_pred hHHHHHHHHHHHHH---------hCCCCEEEEeCCCc
Q 024643 209 NARKLAEQDESMLM---------ASGIPYTIIRTGVL 236 (265)
Q Consensus 209 ~~~~~k~~~E~~l~---------~~gl~~tivRPg~l 236 (265)
.|...+.+.+ ..+++++.+.||++
T Consensus 164 ----sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i 196 (287)
T PRK06194 164 ----SKHAVVSLTETLYQDLSLVTDQVGASVLCPYFV 196 (287)
T ss_pred ----HHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcc
Confidence 3333333321 24688899999986
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.8e-12 Score=110.21 Aligned_cols=140 Identities=16% Similarity=0.221 Sum_probs=93.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++...+ ....+.++.+|++|.+++.++++ .+|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457899999999999999999999999999999998765432 23457889999999999887765 57999
Q ss_pred EEcCc-----h--------H-------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 168 ICPSE-----G--------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 168 i~~~~-----~--------~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
|++.+ . + +.++ +...+ -.+||++||.....+.++...|..++.. ...
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 164 (257)
T PRK07067 85 FNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYT 164 (257)
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHH
Confidence 98621 0 0 1111 22222 3589999997654433332233222211 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.....+...|+++++|+||++.
T Consensus 165 ~~la~e~~~~gi~v~~i~pg~v~ 187 (257)
T PRK07067 165 QSAALALIRHGINVNAIAPGVVD 187 (257)
T ss_pred HHHHHHhcccCeEEEEEeeCccc
Confidence 12222233579999999999874
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.5e-12 Score=109.61 Aligned_cols=141 Identities=12% Similarity=0.171 Sum_probs=94.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh-h--cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME-S--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~-~--~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
..+++++||||+++||++++++|+++|++|++++|+... ... . .+.++.++.+|++|.+++.++++ .+|
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356899999999999999999999999999999886422 111 1 24467889999999999887764 479
Q ss_pred EEEEcCch-------------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSEG-------------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~~-------------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
++|++.+. + +...+.+.+ -.+||++||...+.+......|..++.. .
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~ 165 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG 165 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence 99986210 0 011133333 3699999998776544333233222211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|++++.|+||++.
T Consensus 166 l~~~la~e~~~~girvn~v~PG~v~ 190 (251)
T PRK12481 166 LTRALATELSQYNINVNAIAPGYMA 190 (251)
T ss_pred HHHHHHHHHhhcCeEEEEEecCCCc
Confidence 1122233344579999999999874
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=1e-11 Score=107.94 Aligned_cols=138 Identities=14% Similarity=0.179 Sum_probs=92.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+|+||++++++|+++|++|++++|+... .+. + .+..+.++.+|++|++++.++++ +
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999999997532 211 1 13457889999999999887664 5
Q ss_pred CCEEEEcCch--------------------HHHHHHHh--CCCCEEEEeccccccc-CCCCcccccchhHHHHHHHHHHH
Q 024643 164 VRSIICPSEG--------------------FISNAGSL--KGVQHVILLSQLSVYR-GSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 164 ~d~vi~~~~~--------------------~~~~aa~~--~gv~r~V~iSS~~v~~-~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
+|++|++... .+.+++.. ....++|++||..... ......+. ...+...|..+|.+
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~-~~~Y~~sK~a~e~~ 163 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPE-YEPVARSKRAGEDA 163 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCcc-ccHHHHHHHHHHHH
Confidence 8998876210 12222322 1235899999965431 11011111 11222467777766
Q ss_pred HHh-------CCCCEEEEeCCCc
Q 024643 221 LMA-------SGIPYTIIRTGVL 236 (265)
Q Consensus 221 l~~-------~gl~~tivRPg~l 236 (265)
++. .++++++++||.+
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~ 186 (248)
T PRK07806 164 LRALRPELAEKGIGFVVVSGDMI 186 (248)
T ss_pred HHHHHHHhhccCeEEEEeCCccc
Confidence 543 6899999999875
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=6.3e-12 Score=110.01 Aligned_cols=140 Identities=12% Similarity=0.139 Sum_probs=95.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+++++||||+|+||++++++|+++|++|++++|+.+..++.. +..+..+.+|++|.+++.++++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999876543321 3457788999999988766553
Q ss_pred CCCEEEEcCch-----H---------------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 GVRSIICPSEG-----F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 ~~d~vi~~~~~-----~---------------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
.+|.+|++.+. . +. ..+++.+.++||++||...+.+......|...+..
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~ 167 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAAL 167 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHH
Confidence 57999987210 0 11 11344566899999998776554333333322211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.........+...+++++.++||++.
T Consensus 168 ~~~~~~la~e~~~~~i~v~~i~Pg~i~ 194 (257)
T PRK09242 168 LQMTRNLAVEWAEDGIRVNAVAPWYIR 194 (257)
T ss_pred HHHHHHHHHHHHHhCeEEEEEEECCCC
Confidence 11111222234578999999999873
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.42 E-value=5.4e-12 Score=110.06 Aligned_cols=136 Identities=13% Similarity=0.139 Sum_probs=95.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.... .+..+..+.+|++|.+++.++++ .
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3468999999999999999999999999999999987654322 23468889999999998887665 4
Q ss_pred CCEEEEcCc-----h-H---------------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSE-----G-F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~-----~-~---------------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|++|++.+ . + + ...+.+.+..++|++||...+.+......|..
T Consensus 85 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~----- 159 (253)
T PRK06172 85 LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAA----- 159 (253)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHH-----
Confidence 599998711 0 0 0 01133455679999999877655433323222
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|++++.|.||++.
T Consensus 160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~ 191 (253)
T PRK06172 160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVID 191 (253)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCcc
Confidence 33333322 23468999999999873
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=6.6e-12 Score=108.32 Aligned_cols=139 Identities=18% Similarity=0.208 Sum_probs=92.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
++++||||+|+||++++++|+++|++|+++.| +..+.++. .+..+.++.+|+.|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 57999999999999999999999999999988 44332221 23468899999999988876654 479
Q ss_pred EEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HH
Q 024643 166 SIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 213 (265)
Q Consensus 166 ~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~ 213 (265)
.+|++.+. + +...+++.+.++||++||............|...+.. ..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~ 160 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGF 160 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHH
Confidence 99987210 0 1122455677899999997655433322222222210 01
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
.....+.+...+++++.++||++.+
T Consensus 161 ~~~la~~~~~~~i~v~~i~pg~~~t 185 (242)
T TIGR01829 161 TKALAQEGATKGVTVNTISPGYIAT 185 (242)
T ss_pred HHHHHHHhhhhCeEEEEEeeCCCcC
Confidence 1122223445799999999998743
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=4.9e-12 Score=110.93 Aligned_cols=133 Identities=14% Similarity=0.238 Sum_probs=93.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
++|+||||+|+||++++++|+++|++|++++|+..+.+.. .+..+.++.+|+.|.+++.++++ ++|.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999999999999999999999999999987554322 23467889999999998887765 6799
Q ss_pred EEEcCc----h-H----------------------HHHHHH---hCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE----G-F----------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~----~-~----------------------~~~aa~---~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.. . + +...+. ..+.+++|++||...+.+..+...|. ..|..
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK~~ 156 (263)
T PRK06181 82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYA-----ASKHA 156 (263)
T ss_pred EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHH-----HHHHH
Confidence 998721 0 0 011111 12357899999987765443332322 24444
Q ss_pred HHHH-------HHhCCCCEEEEeCCCcc
Q 024643 217 DESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+.+ +...++++++++||++.
T Consensus 157 ~~~~~~~l~~~~~~~~i~~~~i~pg~v~ 184 (263)
T PRK06181 157 LHGFFDSLRIELADDGVAVTVVCPGFVA 184 (263)
T ss_pred HHHHHHHHHHHhhhcCceEEEEecCccc
Confidence 3433 33478999999999864
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2e-12 Score=115.67 Aligned_cols=121 Identities=12% Similarity=0.044 Sum_probs=87.6
Q ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc-------h
Q 024643 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE-------G 173 (265)
Q Consensus 103 lVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~-------~ 173 (265)
+||||+||||++|+++|++.|++|+++.+. ..+|+.|.+++.++++ ++|+|||+.. .
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~ 66 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN 66 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence 699999999999999999999988765432 1489999999999887 4699998721 0
Q ss_pred ----------------HHHHHHHhCCCCEEEEecccccccCCCC--cc-------cccch-hHH-HHHHHHHHHH----H
Q 024643 174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-------ALMKG-NAR-KLAEQDESML----M 222 (265)
Q Consensus 174 ----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~~-------~~~~~-~~~-~~k~~~E~~l----~ 222 (265)
.+.+++++.++++||++||..+|..... .. +..+. ..| ..|..+|+++ +
T Consensus 67 ~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~ 146 (306)
T PLN02725 67 MTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRI 146 (306)
T ss_pred hhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence 1344577788999999999998864311 10 11111 123 4677777654 3
Q ss_pred hCCCCEEEEeCCCcc
Q 024643 223 ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 ~~gl~~tivRPg~l~ 237 (265)
..+++++++||+.+.
T Consensus 147 ~~~~~~~~~R~~~vy 161 (306)
T PLN02725 147 QYGWDAISGMPTNLY 161 (306)
T ss_pred HhCCCEEEEEeccee
Confidence 579999999999754
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.2e-12 Score=110.71 Aligned_cols=136 Identities=12% Similarity=0.061 Sum_probs=93.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---c--CCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~--~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..+++++||||+|+||++++++|+++|++|++++|+.+..++. . ..+++++++|++|.+++.++++ .+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 3468999999999999999999999999999999986544322 1 2357899999999999888775 58
Q ss_pred CEEEEcCc------h-H---------------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 165 RSIICPSE------G-F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 165 d~vi~~~~------~-~---------------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
|.+|++.+ . + +..+ +...+..++|++||............|..
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~----- 170 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTG----- 170 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHH-----
Confidence 99998711 0 0 0011 22234568999998766433222223322
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...|.+ +...++++++++||++.
T Consensus 171 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~ 202 (280)
T PLN02253 171 SKHAVLGLTRSVAAELGKHGIRVNCVSPYAVP 202 (280)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 44344333 33468999999999874
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.41 E-value=8.7e-12 Score=109.11 Aligned_cols=141 Identities=17% Similarity=0.172 Sum_probs=92.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-------C-CccEEeeeCCCCHHHHHHHHc-------C
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G-TYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~-~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
+++|+||||+|+||+++++.|+++|++|++++|+..+..... + ..+.++.+|++|.+++.++++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999999999999999875443221 1 358899999999988876654 5
Q ss_pred CCEEEEcCc-------------hH-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH-
Q 024643 164 VRSIICPSE-------------GF-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 164 ~d~vi~~~~-------------~~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
+|++|++.+ .+ +...+...+ -.+||++||.....+.....+|...+..
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~ 161 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG 161 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence 799998621 00 111133345 3599999996543332222233222211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCccCC
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQNT 239 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~~~ 239 (265)
...+.....+...|++++++|||.+.+.
T Consensus 162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~ 190 (259)
T PRK12384 162 VGLTQSLALDLAEYGITVHSLMLGNLLKS 190 (259)
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCCcccc
Confidence 1111222233458999999999975443
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.6e-12 Score=109.58 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=94.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.+ ....+.++.+|+++.+++.++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999999999999999999999999999988665433 13457889999999999888765 5
Q ss_pred CCEEEEcCch-------------H-------------HH----HHHHhCC--------CCEEEEecccccccCCCCcccc
Q 024643 164 VRSIICPSEG-------------F-------------IS----NAGSLKG--------VQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~----~aa~~~g--------v~r~V~iSS~~v~~~~~~~~~~ 205 (265)
+|++|++.+. + +. ..+.... ..++|++||...+.......+|
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 166 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence 7999987210 0 00 1122222 3589999998776543332233
Q ss_pred cchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 206 MKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.. .|...+.+ +...++++++|+||++.
T Consensus 167 ~~-----sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~ 200 (258)
T PRK06949 167 CM-----SKAAVVHMTRAMALEWGRHGINVNAICPGYID 200 (258)
T ss_pred HH-----HHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCc
Confidence 22 23222222 23468999999999974
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-11 Score=107.33 Aligned_cols=139 Identities=16% Similarity=0.163 Sum_probs=91.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.++++||||+|+||++++++|+++|++|++++|+... ... + .+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999986532 111 1 23468899999999988876654 57
Q ss_pred CEEEEcCch-------H---------------------HHHH----HHhC-C-----CCEEEEecccccccCCCCccccc
Q 024643 165 RSIICPSEG-------F---------------------ISNA----GSLK-G-----VQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 165 d~vi~~~~~-------~---------------------~~~a----a~~~-g-----v~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
|++|++.+. + +.++ +.+. + +++||++||..+..+......|.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 999987210 0 0111 2211 1 56899999987765443333333
Q ss_pred chhHHH--HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 207 KGNARK--LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~~~--~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+... ..+.....+...|+++++++||.+.
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~ 194 (256)
T PRK12745 162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIK 194 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCc
Confidence 322211 1112222234578999999999864
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.8e-12 Score=107.72 Aligned_cols=139 Identities=19% Similarity=0.161 Sum_probs=93.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.++++||||+|+||++++++|+++|++|++++|+... ..+. .+..+.++.+|+.|.+++.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3589999999999999999999999999999998531 1111 12358899999999998877664 47
Q ss_pred CEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|.+|++.+. + +...++..+.++||++||...+.+......|...+.. .
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 999986210 0 1122455667899999998776543322222222210 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...++++++++||++.
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~ 186 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIA 186 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccC
Confidence 1122222344578999999999874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6e-12 Score=110.02 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=92.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
+++++||||+|+||++++++|+++|++|++++|+..+.+.+ .+..++++++|+.|.+++.++++ ++|.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999999987665433 23467889999999999887775 47999
Q ss_pred EEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 168 ICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 168 i~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|++.+ . + ....+.+.+.++||++||....... ....|.. .|...
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-~~~~y~~-----sK~a~ 155 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL-GHPAYSA-----AKAGL 155 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC-CCcccHH-----HHHHH
Confidence 98721 0 0 0111344567899999997543221 1112221 33333
Q ss_pred HHH-------HHhCCCCEEEEeCCCcc
Q 024643 218 ESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~-------l~~~gl~~tivRPg~l~ 237 (265)
+.+ +...|+++++++||++.
T Consensus 156 ~~~~~~~a~~~~~~gi~v~~v~pg~v~ 182 (257)
T PRK07074 156 IHYTKLLAVEYGRFGIRANAVAPGTVK 182 (257)
T ss_pred HHHHHHHHHHHhHhCeEEEEEEeCcCC
Confidence 332 33468999999999863
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.2e-12 Score=108.93 Aligned_cols=135 Identities=15% Similarity=0.146 Sum_probs=93.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-chhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
.+++++||||+|+||++++++|+++|++|+++.|+.+ ....+...++.++.+|++|++++.++++ .+|.+|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999999999998876543 2333333357889999999999887764 5799998
Q ss_pred cCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCC-CcccccchhHHHHHHHHH
Q 024643 170 PSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNARKLAEQDE 218 (265)
Q Consensus 170 ~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~-~~~~~~~~~~~~~k~~~E 218 (265)
+.+ .+ +...+++.+.++||++||...+.... ....|.. .|...+
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a-----sKaa~~ 160 (255)
T PRK06463 86 NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAI-----TKAGII 160 (255)
T ss_pred CCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHH-----HHHHHH
Confidence 621 00 11124445667999999987764321 1112222 333333
Q ss_pred H-------HHHhCCCCEEEEeCCCcc
Q 024643 219 S-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~-------~l~~~gl~~tivRPg~l~ 237 (265)
. .+...|+++++|+||++.
T Consensus 161 ~~~~~la~e~~~~~i~v~~i~Pg~v~ 186 (255)
T PRK06463 161 ILTRRLAFELGKYGIRVNAVAPGWVE 186 (255)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCCCC
Confidence 2 233478999999999873
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-11 Score=107.16 Aligned_cols=136 Identities=12% Similarity=0.098 Sum_probs=95.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||.+++++|+++|++|++++|+.++.+.+ .+..+..+++|+.|.+++.++++ .
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999987654332 13356788999999988876654 4
Q ss_pred CCEEEEcCch--------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSEG--------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~~--------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|.+|++.+. + +...++..+.+++|++||.....+..+...|. .
T Consensus 86 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~ 160 (252)
T PRK07035 86 LDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYS-----I 160 (252)
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchH-----H
Confidence 7999976210 0 01113455678999999976654333222222 2
Q ss_pred HHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
.|..++.++ ...|++++.|.||.+.
T Consensus 161 sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~ 192 (252)
T PRK07035 161 TKAAVISMTKAFAKECAPFGIRVNALLPGLTD 192 (252)
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeecccc
Confidence 444444433 3468999999999873
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=1e-11 Score=107.69 Aligned_cols=139 Identities=14% Similarity=0.183 Sum_probs=90.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchh----hh--cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAM----ES--FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~----~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++++||||+|+||++++++|+++|++|+++.+ +..+.. ++ .+..+..+.+|+.|.+++.++++ .+
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999988654 322211 11 13356778899999998877664 57
Q ss_pred CEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|++|++... + +...+++.+.++||++||.....+......|...+.. .
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~ 162 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG 162 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence 999987210 0 1112445677899999997654433322223222211 0
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
......+.+...+++++.|+||++.
T Consensus 163 ~~~~l~~~~~~~gi~v~~i~pg~~~ 187 (246)
T PRK12938 163 FTMSLAQEVATKGVTVNTVSPGYIG 187 (246)
T ss_pred HHHHHHHHhhhhCeEEEEEEecccC
Confidence 1112222334578999999999874
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=7.8e-12 Score=106.83 Aligned_cols=132 Identities=13% Similarity=0.114 Sum_probs=92.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc---CCCEEEEcCch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPSEG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~~ 173 (265)
+|+++||||+|+||+++++.|+++ ++|++++|+.++.+.+. ...++++++|+.|.+++.++++ ++|.+|++...
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 478999999999999999999999 99999999876644332 2368899999999999998886 58999987110
Q ss_pred -------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHH-
Q 024643 174 -------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM- 222 (265)
Q Consensus 174 -------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~- 222 (265)
+ +...++ .+.+++|++||..++....+...|.. .|...+.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~v~~ss~~~~~~~~~~~~y~~-----~K~a~~~~~~~ 155 (227)
T PRK08219 82 ADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALR-AAHGHVVFINSGAGLRANPGWGSYAA-----SKFALRALADA 155 (227)
T ss_pred CCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCeEEEEcchHhcCcCCCCchHHH-----HHHHHHHHHHH
Confidence 0 001122 23578999999877654433223222 3333333322
Q ss_pred ----hCC-CCEEEEeCCCcc
Q 024643 223 ----ASG-IPYTIIRTGVLQ 237 (265)
Q Consensus 223 ----~~g-l~~tivRPg~l~ 237 (265)
..+ ++++.++||.+.
T Consensus 156 ~~~~~~~~i~~~~i~pg~~~ 175 (227)
T PRK08219 156 LREEEPGNVRVTSVHPGRTD 175 (227)
T ss_pred HHHHhcCCceEEEEecCCcc
Confidence 134 999999999864
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.1e-11 Score=113.35 Aligned_cols=141 Identities=14% Similarity=0.114 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------cC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RG 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.+++++. .+..+.++.+|++|++++.+++ ..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 3467999999999999999999999999999999998765432 2345778899999999988776 35
Q ss_pred CCEEEEcCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|.+|++.+ .+ ....+++.+..+||++||...+...+....|..++..
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~ 164 (330)
T PRK06139 85 IDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLR 164 (330)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHH
Confidence 799998721 00 0111344556799999998776544332223222211
Q ss_pred HHHHHHHHHHHh-CCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMA-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~-~gl~~tivRPg~l~ 237 (265)
........++.. .++.++.|.||++.
T Consensus 165 ~~~~sL~~El~~~~gI~V~~v~Pg~v~ 191 (330)
T PRK06139 165 GFSEALRGELADHPDIHVCDVYPAFMD 191 (330)
T ss_pred HHHHHHHHHhCCCCCeEEEEEecCCcc
Confidence 111112222333 48999999999873
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.5e-11 Score=108.17 Aligned_cols=138 Identities=14% Similarity=0.164 Sum_probs=94.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+++++||||+|+||++++++|+++|++|++++|+..+.. ...+.++.+|++|++++.++++ .+|.+|+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 45689999999999999999999999999999999876543 3467889999999998887664 4799998
Q ss_pred cCch--------------------------H---------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 170 PSEG--------------------------F---------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 170 ~~~~--------------------------~---------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
+.+. + +. ..+.+.+..+||++||...+........|...+.
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 163 (266)
T PRK06171 84 NAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKA 163 (266)
T ss_pred CCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHH
Confidence 6210 0 00 1123345578999999877654433323322221
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 R--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ...+.....+...|+++++|+||++.
T Consensus 164 a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 164 ALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 1 11112222334579999999999874
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=7.9e-12 Score=109.70 Aligned_cols=138 Identities=22% Similarity=0.206 Sum_probs=92.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
|+++||||+++||++++++|+++|++|++++|+.++.++.. ...+.++++|++|++++.++++ .+|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 68999999999999999999999999999999876543321 1357889999999998887663 58999
Q ss_pred EEcCch---------------H-------------HH----HHHH-hCCCCEEEEecccccccCCCCcccccchhH--HH
Q 024643 168 ICPSEG---------------F-------------IS----NAGS-LKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 212 (265)
Q Consensus 168 i~~~~~---------------~-------------~~----~aa~-~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~ 212 (265)
|++.+. + +. ..+. ..+.++||++||..+..+.+....|...+. ..
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~ 160 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ 160 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence 876210 0 00 0122 334579999999877644332222221111 11
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|++++.|.||++.
T Consensus 161 ~~~~la~e~~~~gI~v~~v~pG~v~ 185 (259)
T PRK08340 161 LAKGVSRTYGGKGIRAYTVLLGSFD 185 (259)
T ss_pred HHHHHHHHhCCCCEEEEEeccCccc
Confidence 1122223334578999999999873
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=1e-11 Score=111.83 Aligned_cols=101 Identities=15% Similarity=0.152 Sum_probs=76.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c----CCccEEeeeCCCCHHHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F----GTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~----~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
+..+++|+||||+|+||++++++|+++|++|++++|+.++.... . +..+.++.+|+.|.+++.++++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 34678999999999999999999999999999999987654321 1 2457889999999998887664
Q ss_pred --CCCEEEEcCc-----------h----H-------------HHHHHHhCCCCEEEEecccccc
Q 024643 163 --GVRSIICPSE-----------G----F-------------ISNAGSLKGVQHVILLSQLSVY 196 (265)
Q Consensus 163 --~~d~vi~~~~-----------~----~-------------~~~aa~~~gv~r~V~iSS~~v~ 196 (265)
.+|++|++.+ . + +...+++.+.++||++||.+.+
T Consensus 93 ~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~ 156 (306)
T PRK06197 93 YPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHR 156 (306)
T ss_pred CCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHh
Confidence 4799998721 0 0 1122445556799999998653
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.3e-11 Score=108.00 Aligned_cols=138 Identities=12% Similarity=0.140 Sum_probs=93.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+..+.... .+..+.++.+|++|.+++.++++ .+|
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 34468999999999999999999999999999999887554332 23467889999999988866543 479
Q ss_pred EEEEcCc-------hH---------------------HHHHHH---hCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 166 SIICPSE-------GF---------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 166 ~vi~~~~-------~~---------------------~~~aa~---~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
.+|++.+ .+ +..++. ....++||++||...+........|. ..|
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~-----~sK 161 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYA-----ASK 161 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchH-----HHH
Confidence 9998711 00 111111 12236899999987765433222222 244
Q ss_pred HHHHHHHH----h--CCCCEEEEeCCCccC
Q 024643 215 EQDESMLM----A--SGIPYTIIRTGVLQN 238 (265)
Q Consensus 215 ~~~E~~l~----~--~gl~~tivRPg~l~~ 238 (265)
...+.+.+ + .++++++|+||++..
T Consensus 162 aa~~~~~~~la~~~~~~i~v~~i~Pg~i~t 191 (255)
T PRK05717 162 GGLLALTHALAISLGPEIRVNAVSPGWIDA 191 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecccCcC
Confidence 44444332 2 358999999998743
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.9e-12 Score=110.20 Aligned_cols=140 Identities=13% Similarity=0.106 Sum_probs=93.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHc------CCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR------GVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~------~~d~ 166 (265)
++++++||||+|+||++++++|+++|++|++++|+.++..... +.++.++.+|+.|++++.++++ .+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999999999999999999999999999999876554332 3468899999999998876654 5799
Q ss_pred EEEcCch-------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 167 IICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 167 vi~~~~~-------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
+|++.+. + +.. .+...+..++|++||.....+......|...+.. ...
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~ 163 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFS 163 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHH
Confidence 9987210 0 011 1233455789999987654433222222222111 011
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
......+...+++++.+.||++.
T Consensus 164 ~~l~~~~~~~~i~v~~v~Pg~~~ 186 (263)
T PRK09072 164 EALRRELADTGVRVLYLAPRATR 186 (263)
T ss_pred HHHHHHhcccCcEEEEEecCccc
Confidence 11122233478999999999863
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.6e-11 Score=108.02 Aligned_cols=136 Identities=14% Similarity=0.101 Sum_probs=94.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||.+++++|+++|++|++++|+.++.+++ .+..+.++.+|++|++++.++++ .
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999987654432 13467889999999999877664 6
Q ss_pred CCEEEEcCch-----H---------------------HHHH----HHh-CCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSEG-----F---------------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~~-----~---------------------~~~a----a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|++|++... + +.++ +.. .+.++||++||.....+..+...|. .
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~-----~ 162 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYG-----T 162 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhH-----H
Confidence 7999986210 0 1111 112 4567999999976654433322222 2
Q ss_pred HHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.|..++.+.+. .+++++.|+||++.
T Consensus 163 sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~ 193 (263)
T PRK07814 163 AKAALAHYTRLAALDLCPRIRVNAIAPGSIL 193 (263)
T ss_pred HHHHHHHHHHHHHHHHCCCceEEEEEeCCCc
Confidence 44444443322 35899999999864
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.38 E-value=8.2e-12 Score=113.33 Aligned_cols=73 Identities=12% Similarity=0.203 Sum_probs=61.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||.+++++|+++|++|++++|+.++.+.. .+..+.++.+|++|.+++.++++ .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999987654332 12357889999999999887775 38
Q ss_pred CEEEEc
Q 024643 165 RSIICP 170 (265)
Q Consensus 165 d~vi~~ 170 (265)
|++|++
T Consensus 85 D~li~n 90 (322)
T PRK07453 85 DALVCN 90 (322)
T ss_pred cEEEEC
Confidence 999976
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=108.00 Aligned_cols=134 Identities=14% Similarity=0.139 Sum_probs=93.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++ ...+..++++++|+.|++++.++++ .+|++|+
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 81 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVN 81 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 346899999999999999999999999999999998754 1234568899999999998887765 3599998
Q ss_pred cCc-----h--------H-------------HHHH----HHh-CCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 170 PSE-----G--------F-------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 170 ~~~-----~--------~-------------~~~a----a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
+.+ . + +..+ +.+ .+.++||++||.....+.+....|.. .|...+
T Consensus 82 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~-----sK~a~~ 156 (252)
T PRK07856 82 NAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGA-----AKAGLL 156 (252)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHH-----HHHHHH
Confidence 621 0 0 1111 222 24579999999877654433323322 444444
Q ss_pred HHHHh------CCCCEEEEeCCCcc
Q 024643 219 SMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l~~------~gl~~tivRPg~l~ 237 (265)
.+.+. ..++++.|+||++.
T Consensus 157 ~l~~~la~e~~~~i~v~~i~Pg~v~ 181 (252)
T PRK07856 157 NLTRSLAVEWAPKVRVNAVVVGLVR 181 (252)
T ss_pred HHHHHHHHHhcCCeEEEEEEecccc
Confidence 43321 22899999999873
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.38 E-value=5.8e-12 Score=110.65 Aligned_cols=135 Identities=15% Similarity=0.105 Sum_probs=106.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhh--cC--CccEEeeeCCCCHHHHHHHHcCCCEEEEc---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MES--FG--TYVESMAGDASNKKFLKTALRGVRSIICP--- 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~--~~--~~v~~i~~D~~d~~~l~~~~~~~d~vi~~--- 170 (265)
+-.+-|+|||||+|+.++.+|.+.|-+|++-.|..+-- .++ .+ ..+-+...|+.|+++++++++..++||..
T Consensus 61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 56789999999999999999999999999998865421 111 11 35778899999999999999999999965
Q ss_pred ---Cch------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCC
Q 024643 171 ---SEG------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGV 235 (265)
Q Consensus 171 ---~~~------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~ 235 (265)
+.. -+...|+++|+.|||++|+.++. -..++.++..|...|..+++.-.+.|||||+-
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lgan-------v~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~ 213 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGAN-------VKSPSRMLRSKAAGEEAVRDAFPEATIIRPAD 213 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhChhheeehhhcccc-------ccChHHHHHhhhhhHHHHHhhCCcceeechhh
Confidence 111 14556899999999999998743 12234566789999999999878899999997
Q ss_pred ccCCC
Q 024643 236 LQNTP 240 (265)
Q Consensus 236 l~~~~ 240 (265)
+....
T Consensus 214 iyG~e 218 (391)
T KOG2865|consen 214 IYGTE 218 (391)
T ss_pred hcccc
Confidence 65443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=2.1e-11 Score=106.66 Aligned_cols=136 Identities=16% Similarity=0.126 Sum_probs=93.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.+. ... + .+..+..+.+|++|++++.++++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999997542 121 1 13457789999999998887664
Q ss_pred CCCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCC--cccccchhH
Q 024643 163 GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGG--IQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~--~~~~~~~~~ 210 (265)
.+|.+|++.+. + +...++..+.++||++||......... ...|.
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~---- 161 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYN---- 161 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHH----
Confidence 36999987210 0 111234456679999999876543321 11222
Q ss_pred HHHHHHHH-------HHHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDE-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E-------~~l~~~gl~~tivRPg~l~ 237 (265)
..|...+ ..+...|+++++|+||++.
T Consensus 162 -~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~ 194 (254)
T PRK06114 162 -ASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTA 194 (254)
T ss_pred -HHHHHHHHHHHHHHHHHhhcCeEEEEEeecCcc
Confidence 2333322 2334579999999999873
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=106.86 Aligned_cols=141 Identities=11% Similarity=0.078 Sum_probs=91.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
.++++|+||||+|+||.+++++|+++|++|++++|+..+.+... .....++++|++|.+++.++++ .+|.+|
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 84 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAF 84 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 35689999999999999999999999999999999876543321 1123678999999999887775 469999
Q ss_pred EcCc-------h--------H-----------------HHHHHHhCCCCEEEEeccccc-ccCCCCcccccchhHH--HH
Q 024643 169 CPSE-------G--------F-----------------ISNAGSLKGVQHVILLSQLSV-YRGSGGIQALMKGNAR--KL 213 (265)
Q Consensus 169 ~~~~-------~--------~-----------------~~~aa~~~gv~r~V~iSS~~v-~~~~~~~~~~~~~~~~--~~ 213 (265)
++.+ . + +...+++.+..++|++||... +........|...+.. ..
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~ 164 (255)
T PRK06057 85 NNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAM 164 (255)
T ss_pred ECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHH
Confidence 8621 0 0 011133455678999998654 3222122222222210 01
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.......+...|+++++|+||++.
T Consensus 165 ~~~l~~~~~~~gi~v~~i~pg~v~ 188 (255)
T PRK06057 165 SRELGVQFARQGIRVNALCPGPVN 188 (255)
T ss_pred HHHHHHHHHhhCcEEEEEeeCCcC
Confidence 111112233468999999999874
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-11 Score=106.42 Aligned_cols=134 Identities=12% Similarity=0.125 Sum_probs=89.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
.+++|+||||+|+||.++++.|+++|++|++++|+.++...+. ...++++.+|+.|++++.++++ .+|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999999999999999999999999999999886554331 1257889999999998877654 358
Q ss_pred EEEEcCchH----------------------------HHHHHHhCCCCEEEEeccccccc-CCCCcccccchhHHHHHHH
Q 024643 166 SIICPSEGF----------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 166 ~vi~~~~~~----------------------------~~~aa~~~gv~r~V~iSS~~v~~-~~~~~~~~~~~~~~~~k~~ 216 (265)
.++++.+.. ....++ . ..+||++||..... .......|.. .|..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~~~iv~~ss~~~~~~~~~~~~~Y~~-----sK~~ 156 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLK-E-GSSIVLVSSMSGIYKASPDQLSYAV-----AKAG 156 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHh-c-CCEEEEEecchhcccCCCCchHHHH-----HHHH
Confidence 888762110 000111 2 25899999875532 2221112222 3332
Q ss_pred HH-------HHHHhCCCCEEEEeCCCccC
Q 024643 217 DE-------SMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 217 ~E-------~~l~~~gl~~tivRPg~l~~ 238 (265)
.+ ..+...+++++++|||++.+
T Consensus 157 ~~~~~~~~~~~~~~~gi~v~~i~pg~v~~ 185 (238)
T PRK05786 157 LAKAVEILASELLGRGIRVNGIAPTTISG 185 (238)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEecCccCC
Confidence 22 22344699999999999754
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.5e-11 Score=108.41 Aligned_cols=137 Identities=14% Similarity=0.162 Sum_probs=93.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
+..+++++||||+|+||.+++++|+++|++|++++|+.+..... .+.++.++.+|++|++++.++++
T Consensus 6 ~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 6 DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFG 85 (264)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34578999999999999999999999999999999987554322 12356788999999998887764
Q ss_pred CCCEEEEcCch-------------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~~-------------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++... + +..+ +++.+ ++||++||.....+.+....|. .
T Consensus 86 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~-g~iv~iss~~~~~~~~~~~~Y~-----a 159 (264)
T PRK07576 86 PIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPG-ASIIQISAPQAFVPMPMQAHVC-----A 159 (264)
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CEEEEECChhhccCCCCccHHH-----H
Confidence 46999876210 0 0011 22232 6999999986654332222221 2
Q ss_pred HHHHHHHHH-------HhCCCCEEEEeCCCccC
Q 024643 213 LAEQDESML-------MASGIPYTIIRTGVLQN 238 (265)
Q Consensus 213 ~k~~~E~~l-------~~~gl~~tivRPg~l~~ 238 (265)
.|...+.+. ...+++++.++||++.+
T Consensus 160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~ 192 (264)
T PRK07576 160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAG 192 (264)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecccccC
Confidence 444444433 34689999999998753
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-11 Score=105.27 Aligned_cols=138 Identities=14% Similarity=0.151 Sum_probs=92.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH-HHHHHHHcCCCEEEEcCc---
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSE--- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~-~~l~~~~~~~d~vi~~~~--- 172 (265)
.++++++||||+|+||++++++|+++|++|++++|+.... ....+.++.+|+.|+ +.+.+.+..+|++|++.+
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~~~ 79 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---LSGNFHFLQLDLSDDLEPLFDWVPSVDILCNTAGILD 79 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---cCCcEEEEECChHHHHHHHHHhhCCCCEEEECCCCCC
Confidence 3568999999999999999999999999999999986432 234678899999997 555555667899997721
Q ss_pred ---hH---------------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHHHHHHHH
Q 024643 173 ---GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLM 222 (265)
Q Consensus 173 ---~~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~E~~l~ 222 (265)
.+ +.. .+++.+.++||++||.....+......|...+.. .........+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~ 159 (235)
T PRK06550 80 DYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYA 159 (235)
T ss_pred CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhh
Confidence 00 001 1234455799999998776543332233322211 11112222234
Q ss_pred hCCCCEEEEeCCCcc
Q 024643 223 ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 ~~gl~~tivRPg~l~ 237 (265)
..|+++++|+||++.
T Consensus 160 ~~gi~v~~v~pg~v~ 174 (235)
T PRK06550 160 KDGIQVFGIAPGAVK 174 (235)
T ss_pred hcCeEEEEEeeCCcc
Confidence 479999999999873
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.2e-11 Score=109.41 Aligned_cols=136 Identities=17% Similarity=0.178 Sum_probs=96.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeC-----Ccchhhhc-CCccEEeeeCCCCHHHHHHHHc--CCCEEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKD-----KRNAMESF-GTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~-----~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~ 169 (265)
|++|||||.||||+.+++.++++. .+|+.++.= .+.+..+. .++..++++|+.|.+.+.++++ ..|+|++
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 689999999999999999999986 456666642 22222232 3589999999999999999998 5899997
Q ss_pred cCc------------hH----------HHHHHHhCCCC-EEEEecccccccCCCCc-------ccccchhHH-HHHHHHH
Q 024643 170 PSE------------GF----------ISNAGSLKGVQ-HVILLSQLSVYRGSGGI-------QALMKGNAR-KLAEQDE 218 (265)
Q Consensus 170 ~~~------------~~----------~~~aa~~~gv~-r~V~iSS~~v~~~~~~~-------~~~~~~~~~-~~k~~~E 218 (265)
... .| +.+++++...+ ||+++|+.-+|+..... .++.|..+| ++|....
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD 160 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD 160 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence 511 11 45566666554 99999999998764321 244444444 3554444
Q ss_pred HHH----HhCCCCEEEEeCCC
Q 024643 219 SML----MASGIPYTIIRTGV 235 (265)
Q Consensus 219 ~~l----~~~gl~~tivRPg~ 235 (265)
.++ +..|++++|.|++.
T Consensus 161 ~lVray~~TYglp~~ItrcSN 181 (340)
T COG1088 161 LLVRAYVRTYGLPATITRCSN 181 (340)
T ss_pred HHHHHHHHHcCCceEEecCCC
Confidence 444 44899999999984
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.9e-12 Score=110.96 Aligned_cols=125 Identities=18% Similarity=0.203 Sum_probs=96.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCc-----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE----- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~----- 172 (265)
|+|||||++|.+|.+|++.|. .+++|++++|.. +|++|++.+.++++. .|+||++..
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD 64 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVD 64 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECccccccc
Confidence 459999999999999999999 779999988765 799999999999974 599998711
Q ss_pred --------h---------HHHHHHHhCCCCEEEEecccccccCCCC-----cccccchhHH-HHHHHHHHHHHhCCCCEE
Q 024643 173 --------G---------FISNAGSLKGVQHVILLSQLSVYRGSGG-----IQALMKGNAR-KLAEQDESMLMASGIPYT 229 (265)
Q Consensus 173 --------~---------~~~~aa~~~gv~r~V~iSS~~v~~~~~~-----~~~~~~~~~~-~~k~~~E~~l~~~gl~~t 229 (265)
. .+..+|++.|. ++||+||..++....+ .+...|.+.| .+|...|+.+++.+-+.+
T Consensus 65 ~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~~~~~ 143 (281)
T COG1091 65 KAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHL 143 (281)
T ss_pred cccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhCCCEE
Confidence 0 13344556664 7999999999765431 1223334455 489999999999999999
Q ss_pred EEeCCCccCCCC
Q 024643 230 IIRTGVLQNTPG 241 (265)
Q Consensus 230 ivRPg~l~~~~~ 241 (265)
|+|.+|+....+
T Consensus 144 I~Rtswv~g~~g 155 (281)
T COG1091 144 ILRTSWVYGEYG 155 (281)
T ss_pred EEEeeeeecCCC
Confidence 999999765443
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.3e-11 Score=119.45 Aligned_cols=141 Identities=20% Similarity=0.210 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
...++++||||+|+||++++++|+++|++|++++|+.++.++. .+.++.++.+|++|++++.++++ .
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3457899999999999999999999999999999987655432 23467899999999999887765 3
Q ss_pred CCEEEEcCch-------------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH-
Q 024643 164 VRSIICPSEG-------------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
+|.+|++.+. + +...+.+.+ -.+||++||..++........|..++..
T Consensus 393 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 472 (582)
T PRK05855 393 PDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAV 472 (582)
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHH
Confidence 7999987210 0 001133344 3699999999887655443333322221
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.........+...|+++++|+||++.
T Consensus 473 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 499 (582)
T PRK05855 473 LMLSECLRAELAAAGIGVTAICPGFVD 499 (582)
T ss_pred HHHHHHHHHHhcccCcEEEEEEeCCCc
Confidence 01111222334579999999999873
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.5e-11 Score=106.00 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=92.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+..+.+|++|++++.++++ .
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3468999999999999999999999999999999987654433 13457788999999998877664 6
Q ss_pred CCEEEEcCc-----h--------H-------------HH----HHHHhCC-CCEEEEecccccccCC-C-CcccccchhH
Q 024643 164 VRSIICPSE-----G--------F-------------IS----NAGSLKG-VQHVILLSQLSVYRGS-G-GIQALMKGNA 210 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~~----~aa~~~g-v~r~V~iSS~~v~~~~-~-~~~~~~~~~~ 210 (265)
+|++|++.+ . + +. ..+.+.+ -.++|++||....... + ....|..++.
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa 166 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA 166 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence 899998611 0 0 01 1122333 3579999987653221 1 1112222221
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 --RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 --~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|+||++.
T Consensus 167 al~~~~~~la~e~~~~gI~vn~i~PG~v~ 195 (253)
T PRK05867 167 AVIHLTKAMAVELAPHKIRVNSVSPGYIL 195 (253)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEeecCCCC
Confidence 111122223344579999999999873
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.6e-11 Score=107.30 Aligned_cols=138 Identities=17% Similarity=0.131 Sum_probs=90.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c--C-CccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F--G-TYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~--~-~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
|+++||||+|+||++++++|+++|++|++++|+.++.+.. . + ..+.++.+|++|++++.++++ .+|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999999999987654322 1 1 224567899999988776554 479
Q ss_pred EEEEcCch-------------H-------------HHHH----HHh-CCCCEEEEecccccccCCCCcccccchhH--HH
Q 024643 166 SIICPSEG-------------F-------------ISNA----GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 212 (265)
Q Consensus 166 ~vi~~~~~-------------~-------------~~~a----a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~ 212 (265)
++|++.+. + +.++ +.. ...++||++||.....+.+....|...+. ..
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~ 160 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG 160 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence 99987210 0 1111 222 23469999999866443332223322221 11
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
........+...++++++++||++.
T Consensus 161 ~~~~l~~e~~~~~i~v~~v~Pg~v~ 185 (272)
T PRK07832 161 LSEVLRFDLARHGIGVSVVVPGAVK 185 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEecCccc
Confidence 1222223344579999999999874
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.2e-11 Score=102.90 Aligned_cols=136 Identities=10% Similarity=0.009 Sum_probs=89.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHc-----CCCEEEEcCch
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-----GVRSIICPSEG 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~-----~~d~vi~~~~~ 173 (265)
++++||||+|+||++++++|+++|++|++++|+........ ..++.++.+|++|++++.++++ .+|++|++.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 67999999999999999999999999999999986654331 2357788999999998877665 57999976210
Q ss_pred -------H---------------------HHHHHH---hCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHH-
Q 024643 174 -------F---------------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML- 221 (265)
Q Consensus 174 -------~---------------------~~~aa~---~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l- 221 (265)
+ +..++. ..+..+++++||........+...... +...|...+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~--Y~~sK~a~~~~~~ 159 (225)
T PRK08177 82 SGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPL--YKASKAALNSMTR 159 (225)
T ss_pred cCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccc--hHHHHHHHHHHHH
Confidence 0 011111 123368888988644322111111111 112444444433
Q ss_pred ------HhCCCCEEEEeCCCcc
Q 024643 222 ------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ------~~~gl~~tivRPg~l~ 237 (265)
...++.++.|+||++.
T Consensus 160 ~l~~e~~~~~i~v~~i~PG~i~ 181 (225)
T PRK08177 160 SFVAELGEPTLTVLSMHPGWVK 181 (225)
T ss_pred HHHHHhhcCCeEEEEEcCCcee
Confidence 3468999999999874
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=2.4e-11 Score=105.60 Aligned_cols=136 Identities=13% Similarity=0.194 Sum_probs=91.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh---cCCccEEeeeCCCCHHHHHHHHcC--------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES---FGTYVESMAGDASNKKFLKTALRG--------VR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~--------~d 165 (265)
.+++++||||+|+||+++++.|+++|++|+++.++ ..+.+.+ .+..+.++++|+.|++++.++++. +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 45789999999999999999999999999887654 3333222 234678899999999988877653 89
Q ss_pred EEEEcCc----------h-------------H---------HHHH----HHhCCCCEEEEecccccccCCCCcccccchh
Q 024643 166 SIICPSE----------G-------------F---------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 166 ~vi~~~~----------~-------------~---------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
++|++.. . + +..+ +...+..+||++||.....+..+...|.
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~--- 160 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYT--- 160 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchH---
Confidence 9997621 0 0 1111 2345567999999875543322222222
Q ss_pred HHHHHHHHHHHHH-------hCCCCEEEEeCCCccC
Q 024643 210 ARKLAEQDESMLM-------ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 210 ~~~~k~~~E~~l~-------~~gl~~tivRPg~l~~ 238 (265)
..|...+.+++ ..|++++.|+||++..
T Consensus 161 --~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t 194 (253)
T PRK08642 161 --TAKAALLGLTRNLAAELGPYGITVNMVSGGLLRT 194 (253)
T ss_pred --HHHHHHHHHHHHHHHHhCccCeEEEEEeecccCC
Confidence 24444444432 3689999999998743
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.9e-11 Score=120.94 Aligned_cols=137 Identities=14% Similarity=0.219 Sum_probs=98.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.+..++. .+..+.++.+|++|.+++.++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG 447 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 34467999999999999999999999999999999988664432 13468889999999999887775
Q ss_pred CCCEEEEcCc-----h----------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 GVRSIICPSE-----G----------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~----------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|.+|++.+ . + +...+++.+.++||++||.+++...+....|..
T Consensus 448 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~--- 524 (657)
T PRK07201 448 HVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVA--- 524 (657)
T ss_pred CCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHH---
Confidence 5899998721 0 0 011134566789999999988765433223322
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 525 --sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~ 556 (657)
T PRK07201 525 --SKAALDAFSDVAASETLSDGITFTTIHMPLVR 556 (657)
T ss_pred --HHHHHHHHHHHHHHHHHhhCCcEEEEECCcCc
Confidence 33333332 33479999999999874
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-11 Score=110.24 Aligned_cols=135 Identities=13% Similarity=0.054 Sum_probs=91.3
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc----CCCEEEEcCch---
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSEG--- 173 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~----~~d~vi~~~~~--- 173 (265)
|+||||+|+||+++++.|+++|+ +|++++|..... .+.......+..|+.+.+.++.+.+ ++|+|||+...
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~ 79 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT 79 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence 68999999999999999999997 788887654322 1111112456788888887777654 89999987210
Q ss_pred -----------------HHHHHHHhCCCCEEEEecccccccCCCCc----cc-ccchhHH-HHHHHHHHHHHh------C
Q 024643 174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QA-LMKGNAR-KLAEQDESMLMA------S 224 (265)
Q Consensus 174 -----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----~~-~~~~~~~-~~k~~~E~~l~~------~ 224 (265)
.+.+++.+.++ +||++||.++|...... .+ ..+...| ..|..+|+++++ .
T Consensus 80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~ 158 (314)
T TIGR02197 80 TETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEAL 158 (314)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhcc
Confidence 13344666676 79999999988642111 01 1122233 478888887754 3
Q ss_pred CCCEEEEeCCCccC
Q 024643 225 GIPYTIIRTGVLQN 238 (265)
Q Consensus 225 gl~~tivRPg~l~~ 238 (265)
+++++++||+.+..
T Consensus 159 ~~~~~~lR~~~vyG 172 (314)
T TIGR02197 159 SAQVVGLRYFNVYG 172 (314)
T ss_pred CCceEEEEEeeccC
Confidence 57899999997543
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=3.6e-11 Score=103.98 Aligned_cols=136 Identities=14% Similarity=0.140 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.++++++||||+|+||+++++.|+++|++|+++.|+... ... + .+..+.++.+|++|++++.++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999888776432 111 1 24468889999999999888776
Q ss_pred CCCEEEEcCch-------------H-------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 163 GVRSIICPSEG-------------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 163 ~~d~vi~~~~~-------------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
++|++|++.+. + +..++.. ...++||++||.....+.+....|.. .|
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~-----sK 157 (245)
T PRK12937 83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAA-----SK 157 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHH-----HH
Confidence 58999987210 0 0111111 12358999999776544333323322 33
Q ss_pred HHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 215 EQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...+.+ +...++++++++||++.
T Consensus 158 ~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~ 187 (245)
T PRK12937 158 AAVEGLVHVLANELRGRGITVNAVAPGPVA 187 (245)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeCCcc
Confidence 333333 33468999999999864
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=7.1e-12 Score=103.12 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=106.3
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc--
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-- 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-- 170 (265)
-...+|..+|.||||-.|..+++++++.+ -+|+++.|.+. ........+.....|+...+++...+++.|+.||+
T Consensus 14 f~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-~d~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLg 92 (238)
T KOG4039|consen 14 FRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL-PDPATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALG 92 (238)
T ss_pred HhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC-CCccccceeeeEEechHHHHHHHhhhcCCceEEEeec
Confidence 44557889999999999999999999998 58999999752 22223456777788999999999999999999988
Q ss_pred C-------chH----------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCC-EEEEe
Q 024643 171 S-------EGF----------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIR 232 (265)
Q Consensus 171 ~-------~~~----------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~-~tivR 232 (265)
+ +++ ...++++.|+++|+++||.++........ ...|.+.|..+.+-+++ ++|+|
T Consensus 93 TTRgkaGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~sSrFlY-------~k~KGEvE~~v~eL~F~~~~i~R 165 (238)
T KOG4039|consen 93 TTRGKAGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADPSSRFLY-------MKMKGEVERDVIELDFKHIIILR 165 (238)
T ss_pred ccccccccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCcccceee-------eeccchhhhhhhhccccEEEEec
Confidence 1 111 45568899999999999998865543221 23667888888887775 89999
Q ss_pred CCCccCCC
Q 024643 233 TGVLQNTP 240 (265)
Q Consensus 233 Pg~l~~~~ 240 (265)
||.+....
T Consensus 166 PG~ll~~R 173 (238)
T KOG4039|consen 166 PGPLLGER 173 (238)
T ss_pred Ccceeccc
Confidence 99875443
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.35 E-value=2.6e-11 Score=106.03 Aligned_cols=136 Identities=10% Similarity=0.137 Sum_probs=94.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.+..+.. .+..+.++.+|++|.+++.++++ .
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999987654322 13457788999999998877654 4
Q ss_pred CCEEEEcCc-----------h-----H---------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 164 VRSIICPSE-----------G-----F---------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 164 ~d~vi~~~~-----------~-----~---------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
+|++|++.. . + +..+ +.+.+..+||++||.....+..+...|.. .|
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~-----sK 163 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYAS-----SK 163 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHH-----HH
Confidence 799998721 0 0 1111 23345569999999877554433323322 33
Q ss_pred HHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 215 EQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...+.+ +...+++++++.||++.
T Consensus 164 ~a~~~~~~~la~~~~~~~i~v~~v~pg~~~ 193 (255)
T PRK06113 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAIL 193 (255)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEeccccc
Confidence 333333 33478999999999874
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.7e-11 Score=108.09 Aligned_cols=141 Identities=16% Similarity=0.207 Sum_probs=92.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhh----h--cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME----S--FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+|+||++++++|+++|++|++..++.+. .+. + .+..+.++.+|++|.+++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999988775432 111 1 23457789999999988877664
Q ss_pred -CCCEEEEcCc-----h-H---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 -GVRSIICPSE-----G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 -~~d~vi~~~~-----~-~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
.+|++|++.+ . + +..++.. ..-.+||++||..++........|..++..
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~ 212 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAI 212 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHH
Confidence 5799998721 0 0 1111211 122599999999887654433333222211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 213 ~~~~~~la~el~~~gI~v~~v~PG~i~ 239 (300)
T PRK06128 213 VAFTKALAKQVAEKGIRVNAVAPGPVW 239 (300)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEECcCc
Confidence 11122223334579999999999874
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.4e-11 Score=108.19 Aligned_cols=135 Identities=15% Similarity=0.171 Sum_probs=93.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---c--CCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---F--GTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~--~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..+++++||||+|+||+++++.|+++|++|++++|+.++++.+ . ...+..+.+|++|.+++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999999999999999999988765433 1 2245566799999998877653 57
Q ss_pred CEEEEcCch-------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~~-------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|.+|++.+. + +.. .+.+ ...+||++||...+.+.+....|.. .|
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~a-----sK 160 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIE-RRGYVLQVSSLAAFAAAPGMAAYCA-----SK 160 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCEEEEEeCHhhcCCCCCchHHHH-----HH
Confidence 999987210 0 001 1222 2369999999887655433322322 33
Q ss_pred HHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 215 EQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
...+. .+...|+.++++.||++.
T Consensus 161 aal~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 190 (296)
T PRK05872 161 AGVEAFANALRLEVAHHGVTVGSAYLSWID 190 (296)
T ss_pred HHHHHHHHHHHHHHHHHCcEEEEEecCccc
Confidence 33333 334579999999999873
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.6e-11 Score=105.62 Aligned_cols=141 Identities=13% Similarity=0.136 Sum_probs=92.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh-------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+++||++++++|+++|++|+++.|+ .++.+.. .+..+.++.+|++|++++.++++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 356899999999999999999999999999888654 3332211 23467899999999998877664
Q ss_pred -CCCEEEEcCc-----------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccc
Q 024643 163 -GVRSIICPSE-----------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 163 -~~d~vi~~~~-----------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~ 205 (265)
.+|++|++.+ .+ +...+++.+.++||++||.......+....|
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 165 (260)
T PRK08416 86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH 165 (260)
T ss_pred CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccc
Confidence 4788887621 00 0001333455699999998654333322233
Q ss_pred cchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..++.. ...+.....+...|++++.|.||++.
T Consensus 166 ~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~ 199 (260)
T PRK08416 166 GTSKAAVETMVKYAATELGEKNIRVNAVSGGPID 199 (260)
T ss_pred hhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCccc
Confidence 222211 11122233344579999999999873
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.2e-11 Score=104.91 Aligned_cols=134 Identities=20% Similarity=0.184 Sum_probs=89.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++++||||+|+||++++++|+++|++|+++.|+. +..+.. .+..+.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999886643 322221 24468899999999998877664 47
Q ss_pred CEEEEcCch-----H---------------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHHHH
Q 024643 165 RSIICPSEG-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 d~vi~~~~~-----~---------------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
|.+|++.+. + +..+ +.+.+ -++||++||.....+..+...|.. .
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~-----s 156 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTA-----A 156 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHH-----H
Confidence 999987210 0 1111 22222 368999999866544332222222 3
Q ss_pred HHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
|...+. .+...+++++.|+||++.
T Consensus 157 K~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~ 187 (256)
T PRK12743 157 KHALGGLTKAMALELVEHGILVNAVAPGAIA 187 (256)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEeCCcc
Confidence 333333 233468999999999864
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=6.6e-11 Score=106.33 Aligned_cols=142 Identities=18% Similarity=0.244 Sum_probs=91.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc--chhhh------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~--~~~~~------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
...+++++||||+|+||++++++|+++|++|++..|+.+ ..+++ .+..+.++.+|++|.+++.++++
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 355689999999999999999999999999998876532 22111 23457789999999988876653
Q ss_pred --CCCEEEEcCc------hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 --GVRSIICPSE------GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 --~~d~vi~~~~------~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ .+ +..++.. ..-.+||++||..++...+....|...+..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaa 205 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAA 205 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHH
Confidence 5799887621 00 1111111 112589999998877554333333222211
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 206 l~~l~~~la~el~~~gIrvn~i~PG~v~ 233 (294)
T PRK07985 206 ILNYSRGLAKQVAEKGIRVNIVAPGPIW 233 (294)
T ss_pred HHHHHHHHHHHHhHhCcEEEEEECCcCc
Confidence 01112222234479999999999874
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.9e-11 Score=103.53 Aligned_cols=135 Identities=16% Similarity=0.168 Sum_probs=90.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh------cCCccEEeeeCCCCHHHHHHHHcC-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALRG------- 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~------- 163 (265)
.+++++||||+|+||++++++|+++|++|+++.+. ++..++. .+.++.++.+|++|++++.++++.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35799999999999999999999999999876543 3332221 133588899999999998887754
Q ss_pred CCEEEEcCch-----H---------------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSEG-----F---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~~-----~---------------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+. + +..+ +.+.+.++||++||........+...|.. .
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~-----s 159 (247)
T PRK12935 85 VDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSA-----A 159 (247)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHH-----H
Confidence 7999987210 0 0111 22344569999999866544333333332 3
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...++++++++||++.
T Consensus 160 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~ 190 (247)
T PRK12935 160 KAGMLGFTKSLALELAKTNVTVNAICPGFID 190 (247)
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEEeCCCc
Confidence 3322222 23468999999999874
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.5e-11 Score=103.64 Aligned_cols=135 Identities=15% Similarity=0.171 Sum_probs=89.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHH-------cCCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~-------~~~d~v 167 (265)
++++++||||+|+||++++++|+++|++|++++|+.++..+. .+..+.++++|+.|.+++..++ ..+|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 467999999999999999999999999999999987554332 2446788999999988766544 367999
Q ss_pred EEcCc-----hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 168 ICPSE-----GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 168 i~~~~-----~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
|++.+ .+ +..++.. ....++|++||.....+.+....|. ..|...|.
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~-----~sK~a~~~ 159 (249)
T PRK06500 85 FINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYA-----ASKAALLS 159 (249)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHH-----HHHHHHHH
Confidence 98721 00 1111211 1235788877755433322222222 24444444
Q ss_pred HH-------HhCCCCEEEEeCCCcc
Q 024643 220 ML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l-------~~~gl~~tivRPg~l~ 237 (265)
++ ...|++++++|||.+.
T Consensus 160 ~~~~la~e~~~~gi~v~~i~pg~~~ 184 (249)
T PRK06500 160 LAKTLSGELLPRGIRVNAVSPGPVQ 184 (249)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCC
Confidence 43 2368999999999863
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.1e-11 Score=105.09 Aligned_cols=132 Identities=17% Similarity=0.189 Sum_probs=90.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
++++||||+|+||.+++++|+++|++|+++.|+....... .+..+.++.+|++|++++.++++ .+|.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4799999999999999999999999999999986543322 23457889999999999887654 4699
Q ss_pred EEEcCch-----------------H-------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 167 IICPSEG-----------------F-------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 167 vi~~~~~-----------------~-------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++.+. + +...++..+ .++||++||.....+.+....|.. .|.
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~-----sK~ 155 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSS-----TKF 155 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHH-----HHH
Confidence 9987210 0 011123333 269999999766544333333332 333
Q ss_pred HHHHH-------HHhCCCCEEEEeCCCc
Q 024643 216 QDESM-------LMASGIPYTIIRTGVL 236 (265)
Q Consensus 216 ~~E~~-------l~~~gl~~tivRPg~l 236 (265)
..+.+ +...++++++++||++
T Consensus 156 a~~~~~~~l~~~~~~~~i~v~~v~Pg~i 183 (254)
T TIGR02415 156 AVRGLTQTAAQELAPKGITVNAYCPGIV 183 (254)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCcc
Confidence 33332 3346899999999986
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=5e-11 Score=104.55 Aligned_cols=135 Identities=13% Similarity=0.150 Sum_probs=90.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh---hh--cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
.+++++||||+|+||++++++|+++|++|++++|+..... .+ .+..+.++.+|++|++++.++++ .+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999864221 11 13457789999999998887765 579
Q ss_pred EEEEcCc-----h------------H---------HHHH----HHhCCCCEEEEecccccc-cCCCCcccccchhHHHHH
Q 024643 166 SIICPSE-----G------------F---------ISNA----GSLKGVQHVILLSQLSVY-RGSGGIQALMKGNARKLA 214 (265)
Q Consensus 166 ~vi~~~~-----~------------~---------~~~a----a~~~gv~r~V~iSS~~v~-~~~~~~~~~~~~~~~~~k 214 (265)
.+|++.+ . + +..+ +...+..+||++||.... ........|. ..|
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~-----~sK 159 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYA-----LTK 159 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHH-----HHH
Confidence 9998621 0 0 0111 233456799999987653 2111111221 233
Q ss_pred HHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 215 EQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
...+.+. ...+++++.|+||++.
T Consensus 160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~ 189 (263)
T PRK08226 160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVR 189 (263)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence 3333332 2358999999999863
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=2.3e-11 Score=105.89 Aligned_cols=133 Identities=14% Similarity=0.136 Sum_probs=88.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh---cCCccEEeeeCCCCHHHHHHHHcCC---------C-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES---FGTYVESMAGDASNKKFLKTALRGV---------R- 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~~---------d- 165 (265)
++++||||+|+||++++++|+++|++|++++|+. +....+ .+.+++++.+|++|++++.++++.+ +
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS 81 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence 6899999999999999999999999999999987 222222 2346889999999999988777532 2
Q ss_pred -EEEEcCch--------------H-----------------HHHHHHh-CCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 166 -SIICPSEG--------------F-----------------ISNAGSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 166 -~vi~~~~~--------------~-----------------~~~aa~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|++.+. + +...+++ .+.++||++||..+..+......|..
T Consensus 82 ~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~----- 156 (251)
T PRK06924 82 IHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCS----- 156 (251)
T ss_pred eEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhH-----
Confidence 34443100 0 0111333 23468999999876544333222322
Q ss_pred HHHHHHHHH---------HhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESML---------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l---------~~~gl~~tivRPg~l~ 237 (265)
.|...+.+. ...+++++.|+||++.
T Consensus 157 sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~ 190 (251)
T PRK06924 157 SKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMD 190 (251)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccc
Confidence 333333332 2357999999999874
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.4e-11 Score=117.73 Aligned_cols=104 Identities=13% Similarity=0.153 Sum_probs=75.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcch---h----hhc--------------------CCccE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNA---M----ESF--------------------GTYVE 145 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~---~----~~~--------------------~~~v~ 145 (265)
-..+++|+|||||||||++|+++|++.+. +|+++.|..... + ++. ...++
T Consensus 116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 34578999999999999999999998764 689999965321 0 110 23588
Q ss_pred EeeeCCCCH------HHHHHHHcCCCEEEEcCch-------------------HHHHHHHhC-CCCEEEEecccccccCC
Q 024643 146 SMAGDASNK------KFLKTALRGVRSIICPSEG-------------------FISNAGSLK-GVQHVILLSQLSVYRGS 199 (265)
Q Consensus 146 ~i~~D~~d~------~~l~~~~~~~d~vi~~~~~-------------------~~~~aa~~~-gv~r~V~iSS~~v~~~~ 199 (265)
++.+|++++ +....+.+++|+|||+... .+.++++.. +.++||++||..+|...
T Consensus 196 ~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~ 275 (605)
T PLN02503 196 PVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQR 275 (605)
T ss_pred EEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCC
Confidence 899999986 4556667889999987210 133345454 57899999999887543
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.4e-11 Score=101.58 Aligned_cols=138 Identities=13% Similarity=0.040 Sum_probs=92.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH---c--CCCEEEEcCch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---R--GVRSIICPSEG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~---~--~~d~vi~~~~~ 173 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.+++...+++++.+|++|.+.+.+++ . .+|.+|++.+.
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 368999999999999999999999999999999987766555556788999999999888754 2 37999986110
Q ss_pred ---------------H-------------HHHHHH---hCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHH
Q 024643 174 ---------------F-------------ISNAGS---LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM 222 (265)
Q Consensus 174 ---------------~-------------~~~aa~---~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~ 222 (265)
+ +.+++. ...-.++|++||...........+.. .+...|...+.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~--~Y~~sK~a~~~~~~ 158 (222)
T PRK06953 81 YGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGW--LYRASKAALNDALR 158 (222)
T ss_pred ccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCcc--ccHHhHHHHHHHHH
Confidence 0 011111 12235789998865433221111111 12235555555544
Q ss_pred h-----CCCCEEEEeCCCccC
Q 024643 223 A-----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 223 ~-----~gl~~tivRPg~l~~ 238 (265)
. .+++++.++||++..
T Consensus 159 ~~~~~~~~i~v~~v~Pg~i~t 179 (222)
T PRK06953 159 AASLQARHATCIALHPGWVRT 179 (222)
T ss_pred HHhhhccCcEEEEECCCeeec
Confidence 2 478899999999743
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.6e-11 Score=104.21 Aligned_cols=134 Identities=14% Similarity=0.133 Sum_probs=91.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-------hh----h--cCCccEEeeeCCCCHHHHHHHHc--
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------ME----S--FGTYVESMAGDASNKKFLKTALR-- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-------~~----~--~~~~v~~i~~D~~d~~~l~~~~~-- 162 (265)
.+++++||||+|+||++++++|+++|++|++++|+.+.. .+ + .+..+.++.+|++|++++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 457899999999999999999999999999999976421 11 1 23457889999999998887765
Q ss_pred -----CCCEEEEcCch-------------H-------------HHH----HHHhCCCCEEEEecccccccCC--CCcccc
Q 024643 163 -----GVRSIICPSEG-------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGS--GGIQAL 205 (265)
Q Consensus 163 -----~~d~vi~~~~~-------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~--~~~~~~ 205 (265)
.+|.+|++.+. + +.. .++..+-.++|++||.....+. .+...|
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y 164 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAY 164 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchh
Confidence 67999987210 0 111 1333445689999986543322 111122
Q ss_pred cchhHHHHHHHHHHHH-------HhCCCCEEEEeCCCc
Q 024643 206 MKGNARKLAEQDESML-------MASGIPYTIIRTGVL 236 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~l-------~~~gl~~tivRPg~l 236 (265)
. ..|...|.+. ...+++++.|.||++
T Consensus 165 ~-----~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~ 197 (273)
T PRK08278 165 T-----MAKYGMSLCTLGLAEEFRDDGIAVNALWPRTT 197 (273)
T ss_pred H-----HHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCc
Confidence 2 2455555443 346899999999954
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.2e-11 Score=105.33 Aligned_cols=139 Identities=17% Similarity=0.225 Sum_probs=92.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
+++++||||+|+||+++++.|+++|++|++++|+....+.. .+..+.++++|++|++++.++++ .+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 36899999999999999999999999999999987654332 13468889999999998877653 579
Q ss_pred EEEEcCch-------------H-------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSEG-------------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~~-------------~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
.+|++.+. + +..+ +...+ ..+||++||...+.+.....+|..++.. .
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~ 160 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA 160 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence 99976210 0 1111 22222 3689999998765433322233222211 1
Q ss_pred HHHHHHHHHH-hCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLM-ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~-~~gl~~tivRPg~l~ 237 (265)
..+.+...+. ..|++++.|+||++.
T Consensus 161 ~~~~la~e~~~~~gi~v~~v~PG~v~ 186 (252)
T PRK07677 161 MTRTLAVEWGRKYGIRVNAIAPGPIE 186 (252)
T ss_pred HHHHHHHHhCcccCeEEEEEeecccc
Confidence 1112222232 358999999999985
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.3e-11 Score=107.18 Aligned_cols=138 Identities=16% Similarity=0.179 Sum_probs=95.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCc-cEEeeeCCCCHHHHHHHH------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTY-VESMAGDASNKKFLKTAL------ 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~-v~~i~~D~~d~~~l~~~~------ 161 (265)
...++.|+|||||.+||.+++.+|+++|.+++.+.|..++++.. .+.. +.++++|++|.+++.+++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH 88 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence 44578999999999999999999999999988888877654433 2334 899999999999988654
Q ss_pred -cCCCEEEEcCc----hH--------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 162 -RGVRSIICPSE----GF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 162 -~~~d~vi~~~~----~~--------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.++|++|++.+ .+ ...-+++.+-+|||.+||.......+....|..
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~A--- 165 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSA--- 165 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccch---
Confidence 57999997611 00 111156666689999999988765543322322
Q ss_pred HHHHHHHHHH-------HHhCCCCEE-EEeCCCccC
Q 024643 211 RKLAEQDESM-------LMASGIPYT-IIRTGVLQN 238 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~t-ivRPg~l~~ 238 (265)
+|.+.+.+ +...+..+. +|-||++..
T Consensus 166 --SK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~T 199 (282)
T KOG1205|consen 166 --SKHALEGFFETLRQELIPLGTIIIILVSPGPIET 199 (282)
T ss_pred --HHHHHHHHHHHHHHHhhccCceEEEEEecCceee
Confidence 34333333 333443222 699998743
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.7e-11 Score=103.14 Aligned_cols=141 Identities=13% Similarity=0.152 Sum_probs=92.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhhh--cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES--FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
..+++++||||+|+||++++++|+++|++|++++++... ...+ .+..+..+++|++|.+++.++++ .+|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 456899999999999999999999999999988775421 1111 23457889999999998887764 579
Q ss_pred EEEEcCch-------------H-------------HHH----HHHhCC-CCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSEG-------------F-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~~-------------~-------------~~~----aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
++|++.+. + +.. .+.+.+ -.++|++||...+.+......|...+.. .
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG 167 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence 99987210 0 111 122333 3689999998776554333233322211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|++++.|+||++.
T Consensus 168 ~~~~la~e~~~~gi~v~~v~pG~v~ 192 (253)
T PRK08993 168 VTRLMANEWAKHNINVNAIAPGYMA 192 (253)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCccc
Confidence 1112222234479999999999974
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.31 E-value=3.7e-11 Score=104.34 Aligned_cols=137 Identities=8% Similarity=0.092 Sum_probs=89.3
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhhc-------C-CccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMESF-------G-TYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~~-------~-~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++||||+|+||+++++.|+++|++|++++|+ .++.+.+. . ..+..+.+|+.|.+++.++++ .+
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998 44333221 1 123457899999998876654 57
Q ss_pred CEEEEcCc-------------hH-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSE-------------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~-------------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|.+|++.+ .+ +...+++.+.++||++||...+........|...+.. .
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99998721 00 1122455667899999998876554433333222211 1
Q ss_pred HHHHHHHHHHh--CCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMA--SGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~--~gl~~tivRPg~l~ 237 (265)
..+.....+.. .+++++.|+||++.
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~ 187 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIR 187 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccC
Confidence 11111122222 35889999999863
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=9.2e-11 Score=105.17 Aligned_cols=142 Identities=20% Similarity=0.277 Sum_probs=92.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||.+++++|+++|++|++++|+... ... + .+..+.++.+|++|.+.+.++++
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4456899999999999999999999999999999987532 111 1 13457789999999998877664
Q ss_pred -CCCEEEEcCc------hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 -GVRSIICPSE------GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 -~~d~vi~~~~------~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
.+|++|++.+ .+ +..++.. ....+||++||..++........|..++..
T Consensus 123 ~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~ 202 (290)
T PRK06701 123 GRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAI 202 (290)
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHH
Confidence 5799997621 00 1111111 123589999998877554433233222211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|++++.|+||++.
T Consensus 203 ~~l~~~la~~~~~~gIrv~~i~pG~v~ 229 (290)
T PRK06701 203 HAFTRSLAQSLVQKGIRVNAVAPGPIW 229 (290)
T ss_pred HHHHHHHHHHhhhcCeEEEEEecCCCC
Confidence 11111222233468999999999863
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=8.8e-11 Score=101.99 Aligned_cols=134 Identities=16% Similarity=0.216 Sum_probs=87.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE-eCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++|+||||+|+||+.+++.|+++|++|+++. |+.++.+.. .+.++.++.+|++|++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999998765 444433221 23468899999999988876653 58
Q ss_pred CEEEEcCc------hH---------------------HH-HHHH---hCC---CCEEEEecccccccCCCC-cccccchh
Q 024643 165 RSIICPSE------GF---------------------IS-NAGS---LKG---VQHVILLSQLSVYRGSGG-IQALMKGN 209 (265)
Q Consensus 165 d~vi~~~~------~~---------------------~~-~aa~---~~g---v~r~V~iSS~~v~~~~~~-~~~~~~~~ 209 (265)
|.+|++.+ .+ +. .++. ..+ -.+||++||......... ...|..
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~-- 159 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAG-- 159 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHh--
Confidence 99997721 00 10 1111 111 247999999766433221 122322
Q ss_pred HHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...+++++++|||++.
T Consensus 160 ---sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~ 191 (248)
T PRK06947 160 ---SKGAVDTLTLGLAKELGPHGVRVNAVRPGLIE 191 (248)
T ss_pred ---hHHHHHHHHHHHHHHhhhhCcEEEEEeccCcc
Confidence 3333332 233468999999999874
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.2e-10 Score=102.12 Aligned_cols=141 Identities=11% Similarity=0.113 Sum_probs=92.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|+++.|+... ... + .+..+.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999999999999999999998885432 211 1 13457788999999998877664
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|.+|++.. . + +...+++.+ -++||++||...+.+.+....|...+..
T Consensus 85 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa 164 (261)
T PRK08936 85 TLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGG 164 (261)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHH
Confidence 4799997711 0 0 011133344 3689999998665443333333332211
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|++++.|+||++.
T Consensus 165 ~~~~~~~la~e~~~~gi~v~~v~pg~v~ 192 (261)
T PRK08936 165 VKLMTETLAMEYAPKGIRVNNIGPGAIN 192 (261)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECcCC
Confidence 11112222334579999999999873
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.7e-11 Score=103.29 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=93.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc---CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~---~~d~v 167 (265)
.+++++|||++|+||+++++.|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ .+|.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999999999999999987654432 13457889999999999887664 58999
Q ss_pred EEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 168 ICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 168 i~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|++.+. + +...+++.+-.++|++||.....+......+. ..|...
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~-----ask~al 160 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGS-----AGNAAL 160 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhH-----HHHHHH
Confidence 986110 0 11113444456899999876643322211111 133222
Q ss_pred H-------HHHHhCCCCEEEEeCCCcc
Q 024643 218 E-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E-------~~l~~~gl~~tivRPg~l~ 237 (265)
+ .++...|++++.|+||++.
T Consensus 161 ~~~~~~la~e~~~~gi~v~~i~PG~v~ 187 (259)
T PRK06125 161 MAFTRALGGKSLDDGVRVVGVNPGPVA 187 (259)
T ss_pred HHHHHHHHHHhCccCeEEEEEecCccc
Confidence 2 2334578999999999864
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.9e-11 Score=103.15 Aligned_cols=134 Identities=16% Similarity=0.189 Sum_probs=92.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.+.+ .+..+.++++|++|.+++.++++ .+|.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 467999999999999999999999999999999987665443 23457889999999988877664 57899
Q ss_pred EEcCc------h------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 168 ICPSE------G------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 168 i~~~~------~------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
|++.+ . + +.. .+++. -.++|++||...+.+......|..
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~----- 158 (263)
T PRK06200 85 VGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTA----- 158 (263)
T ss_pred EECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHH-----
Confidence 87611 0 0 000 12222 268999999877654433222322
Q ss_pred HHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.|...+.+.+. .+++++.|.||++.
T Consensus 159 sK~a~~~~~~~la~el~~~Irvn~i~PG~i~ 189 (263)
T PRK06200 159 SKHAVVGLVRQLAYELAPKIRVNGVAPGGTV 189 (263)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEeCCccc
Confidence 33333333221 35999999999873
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.1e-11 Score=103.78 Aligned_cols=135 Identities=20% Similarity=0.139 Sum_probs=90.8
Q ss_pred CCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCC-----------cch----hhh--cCCccEEeeeCCCCHHHHH
Q 024643 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA----MES--FGTYVESMAGDASNKKFLK 158 (265)
Q Consensus 98 ~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~-----------~~~----~~~--~~~~v~~i~~D~~d~~~l~ 158 (265)
++++|+||||+| +||.+++++|+++|++|++++|++ ... ..+ .+..++++.+|++|.+++.
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 467899999995 899999999999999999999872 111 111 2346889999999999887
Q ss_pred HHHc-------CCCEEEEcCc-----hH---------------------HHHH----HHhCCCCEEEEecccccccCCCC
Q 024643 159 TALR-------GVRSIICPSE-----GF---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGG 201 (265)
Q Consensus 159 ~~~~-------~~d~vi~~~~-----~~---------------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~ 201 (265)
.+++ .+|++|++.. .+ +..+ +...+.++||++||...+.+...
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~ 163 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPD 163 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCC
Confidence 6654 4799998721 00 1111 12234569999999877654332
Q ss_pred cccccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 202 IQALMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 202 ~~~~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...|. ..|...+.+ +...+++++.++||.+.
T Consensus 164 ~~~Y~-----~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~ 201 (256)
T PRK12748 164 ELAYA-----ATKGAIEAFTKSLAPELAEKGITVNAVNPGPTD 201 (256)
T ss_pred chHHH-----HHHHHHHHHHHHHHHHHHHhCeEEEEEEeCccc
Confidence 22222 244444443 23468999999999863
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.5e-11 Score=107.31 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------c-CCccEEeeeCCCCHHHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~-~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
+..+++++||||+++||.+++++|+++|++|++++|+.++.++. . ...+.++.+|+.|.++++++++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~ 90 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAE 90 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999987654332 1 2357889999999999887664
Q ss_pred --CCCEEEEc
Q 024643 163 --GVRSIICP 170 (265)
Q Consensus 163 --~~d~vi~~ 170 (265)
.+|++|++
T Consensus 91 ~~~iD~li~n 100 (313)
T PRK05854 91 GRPIHLLINN 100 (313)
T ss_pred CCCccEEEEC
Confidence 47999876
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.1e-10 Score=100.95 Aligned_cols=135 Identities=13% Similarity=0.159 Sum_probs=89.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh-------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+++|+||||+|+||++++++|+++|++|++++|+... .+.+ .+..+.++.+|++|.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999999999999986432 2111 12357889999999999887775
Q ss_pred CCCEEEEcCch-------------H-------------HHHHHHh---CCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 163 GVRSIICPSEG-------------F-------------ISNAGSL---KGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 163 ~~d~vi~~~~~-------------~-------------~~~aa~~---~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
.+|.+|++.+. + +.+++.. ..-.+++.+++.....+..+...| -..
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-----~~s 159 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVY-----CAA 159 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhH-----HHH
Confidence 47999987210 0 1111211 122467777664433222221121 235
Q ss_pred HHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
|..+|.+++. .+++++++|||++.
T Consensus 160 K~~~~~~~~~l~~~~~~~i~~~~v~pg~~~ 189 (249)
T PRK09135 160 KAALEMLTRSLALELAPEVRVNAVAPGAIL 189 (249)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEEEecccc
Confidence 6666655532 36999999999864
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.4e-11 Score=102.32 Aligned_cols=134 Identities=15% Similarity=0.204 Sum_probs=90.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-hhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-ESFGTYVESMAGDASNKKFLKTALR-------GVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~~ 170 (265)
.++++||||+|+||++++++|+++|++|++++|+.+... .+...+++++.+|+.|.+++.++++ .+|.+|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 578999999999999999999999999999999875432 2222347889999999988876553 47888886
Q ss_pred Cc----h---------H-----------------HHHHHHhCC--CCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 171 SE----G---------F-----------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 171 ~~----~---------~-----------------~~~aa~~~g--v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
.+ . + +...+++.+ ..++|++||............|. ..|...+
T Consensus 82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~-----asKaal~ 156 (236)
T PRK06483 82 ASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYA-----ASKAALD 156 (236)
T ss_pred CccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHH-----HHHHHHH
Confidence 21 0 0 011133333 46899999876543322222222 2444444
Q ss_pred HHHHh------CCCCEEEEeCCCcc
Q 024643 219 SMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l~~------~gl~~tivRPg~l~ 237 (265)
.+.+. .+++++.|+||++.
T Consensus 157 ~l~~~~a~e~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 157 NMTLSFAAKLAPEVKVNSIAPALIL 181 (236)
T ss_pred HHHHHHHHHHCCCcEEEEEccCcee
Confidence 44321 35999999999864
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.7e-11 Score=108.20 Aligned_cols=139 Identities=14% Similarity=0.070 Sum_probs=89.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCC--HHH---HHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASN--KKF---LKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d--~~~---l~~~~~~~d 165 (265)
+++++|||||++||++++++|+++|++|++++|++++.++.. ...+..+.+|+++ .+. +.+.+.+.|
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 679999999999999999999999999999999987654321 2356778899975 333 334444444
Q ss_pred --EEEEcCc------h-H-------------------------HHHHHHhCCCCEEEEeccccccc-C-CCCcccccchh
Q 024643 166 --SIICPSE------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYR-G-SGGIQALMKGN 209 (265)
Q Consensus 166 --~vi~~~~------~-~-------------------------~~~aa~~~gv~r~V~iSS~~v~~-~-~~~~~~~~~~~ 209 (265)
.+|++.+ . + +...+.+.+.++||++||..++. + .+....|..++
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSK 212 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATK 212 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHH
Confidence 7776511 0 0 11114456678999999987753 2 12222222222
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.. ........++...|++++.+.||++.
T Consensus 213 aal~~~~~~L~~El~~~gI~V~~v~PG~v~ 242 (320)
T PLN02780 213 AYIDQFSRCLYVEYKKSGIDVQCQVPLYVA 242 (320)
T ss_pred HHHHHHHHHHHHHHhccCeEEEEEeeCcee
Confidence 21 11222333345579999999999874
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.30 E-value=6.7e-11 Score=101.68 Aligned_cols=136 Identities=16% Similarity=0.241 Sum_probs=88.5
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhh----h--cCCccEEeeeCCCCHHHHHHHHcC-------CCEE
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME----S--FGTYVESMAGDASNKKFLKTALRG-------VRSI 167 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~----~--~~~~v~~i~~D~~d~~~l~~~~~~-------~d~v 167 (265)
|+|||++|+||++++++|+++|++|++++|+. +.... . .+..+.++.+|++|.+++.+++++ +|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999999999999999999875 22211 1 133578899999999988877654 6999
Q ss_pred EEcCch-----H---------------------HHHHH----HhCCCCEEEEecccccccCCCCcccccchhHH--HHHH
Q 024643 168 ICPSEG-----F---------------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAE 215 (265)
Q Consensus 168 i~~~~~-----~---------------------~~~aa----~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~ 215 (265)
|++.+. + +..++ ...+.++||++||.+.....+....|...+.. ....
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~ 160 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTK 160 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHH
Confidence 986110 0 11112 23556799999997654433322222222210 0111
Q ss_pred HHHHHHHhCCCCEEEEeCCCcc
Q 024643 216 QDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.........|+++++++||++.
T Consensus 161 ~l~~~~~~~g~~~~~i~pg~~~ 182 (239)
T TIGR01830 161 SLAKELASRNITVNAVAPGFID 182 (239)
T ss_pred HHHHHHhhcCeEEEEEEECCCC
Confidence 1222233479999999999873
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.30 E-value=8.9e-11 Score=103.17 Aligned_cols=134 Identities=19% Similarity=0.207 Sum_probs=91.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.+++. +..+..+++|+.|.+++.++++ .+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999999999999999999876654432 3457889999999988776664 57999
Q ss_pred EEcCc------h------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 168 ICPSE------G------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 168 i~~~~------~------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
|++.+ . + +.. .+.+.+ +++|++||...+.+......|. .
T Consensus 84 i~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~~sS~~~~~~~~~~~~Y~-----~ 157 (262)
T TIGR03325 84 IPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR-GSVIFTISNAGFYPNGGGPLYT-----A 157 (262)
T ss_pred EECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcC-CCEEEEeccceecCCCCCchhH-----H
Confidence 98721 0 0 001 122233 5788888876654332222222 2
Q ss_pred HHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.|...+.+.+. ..++++.|.||++.
T Consensus 158 sKaa~~~l~~~la~e~~~~irvn~i~PG~i~ 188 (262)
T TIGR03325 158 AKHAVVGLVKELAFELAPYVRVNGVAPGGMS 188 (262)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEEecCCCc
Confidence 44444433321 23899999999874
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=7.8e-11 Score=101.50 Aligned_cols=135 Identities=15% Similarity=0.240 Sum_probs=88.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh-cCCccEEeeeCCCCHHHHHHHHc---CCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES-FGTYVESMAGDASNKKFLKTALR---GVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~ 172 (265)
.+++|+||||+|+||++++++|+++|++|+++.|+ .+..+++ ...++.++.+|++|.+++.+.++ .+|++|++.+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999999887664 3333332 11246788899999988877764 4799997721
Q ss_pred -----hH---------------------H-HHHHHh-CCCCEEEEeccccccc-CCCCcccccchhHHHHHHHHHHH---
Q 024643 173 -----GF---------------------I-SNAGSL-KGVQHVILLSQLSVYR-GSGGIQALMKGNARKLAEQDESM--- 220 (265)
Q Consensus 173 -----~~---------------------~-~~aa~~-~gv~r~V~iSS~~v~~-~~~~~~~~~~~~~~~~k~~~E~~--- 220 (265)
.. + ..++.. ...+++|++||..... +......|. ..|...+.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~-----~sKaa~~~~~~~ 159 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYA-----ASKSALQGMARG 159 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchH-----HhHHHHHHHHHH
Confidence 00 0 011111 2346999999976532 222222222 244444433
Q ss_pred ----HHhCCCCEEEEeCCCcc
Q 024643 221 ----LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 ----l~~~gl~~tivRPg~l~ 237 (265)
+...|+++++|+||++.
T Consensus 160 la~~~~~~gi~v~~v~Pg~~~ 180 (237)
T PRK12742 160 LARDFGPRGITINVVQPGPID 180 (237)
T ss_pred HHHHHhhhCeEEEEEecCccc
Confidence 23478999999999874
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.7e-11 Score=103.15 Aligned_cols=135 Identities=13% Similarity=0.150 Sum_probs=92.6
Q ss_pred CCCEEEEEcCCc-HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cC-CccEEeeeCCCCHHHHHHHHc------
Q 024643 98 ARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FG-TYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 98 ~~~~vlVtGatG-~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~-~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
.+++++||||+| +||+++++.|+++|++|++++|+.++.+.. .+ ..+.++++|++|++++.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 95 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL 95 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 468999999997 799999999999999999999987654322 12 357889999999988887664
Q ss_pred -CCCEEEEcCch-------------H-------------H----HHHHHhCC-CCEEEEecccccccCCCCcccccchhH
Q 024643 163 -GVRSIICPSEG-------------F-------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 -~~d~vi~~~~~-------------~-------------~----~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+. + + ...++..+ -.+||++||.....+......|..
T Consensus 96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~--- 172 (262)
T PRK07831 96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA--- 172 (262)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH---
Confidence 57999987210 0 0 11133333 468999998766544333222322
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 173 --sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~ 204 (262)
T PRK07831 173 --AKAGVMALTRCSALEAAEYGVRINAVAPSIAM 204 (262)
T ss_pred --HHHHHHHHHHHHHHHhCccCeEEEEEeeCCcc
Confidence 33333333 33478999999999863
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.29 E-value=6.7e-11 Score=118.00 Aligned_cols=136 Identities=14% Similarity=0.181 Sum_probs=96.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---C--CccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++..... . ..+.++.+|++|.+++.++++ ++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i 499 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV 499 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999986654321 1 267899999999998887664 68
Q ss_pred CEEEEcCch--------------------------HH----HHHHHhCCC-CEEEEecccccccCCCCcccccchhHHHH
Q 024643 165 RSIICPSEG--------------------------FI----SNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 d~vi~~~~~--------------------------~~----~~aa~~~gv-~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
|++|++.+. .+ ...++..+. .+||++||..+.........|. ..
T Consensus 500 DvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~-----as 574 (681)
T PRK08324 500 DIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYG-----AA 574 (681)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHH-----HH
Confidence 999987220 01 112344554 7999999987755433222222 24
Q ss_pred HHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
|...+.+++ ..|+++++|+|+++.
T Consensus 575 Kaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~ 605 (681)
T PRK08324 575 KAAELHLVRQLALELGPDGIRVNGVNPDAVV 605 (681)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeCceee
Confidence 444444332 357999999999874
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.5e-11 Score=113.25 Aligned_cols=142 Identities=16% Similarity=0.198 Sum_probs=96.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+++||++++++|+++|++|++++|+.++.+.+ .+..+..+.+|++|++++.++++ .+|
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 44678999999999999999999999999999999987665433 24456778999999998887664 479
Q ss_pred EEEEcCc------hH---------------------HHHHH-Hh-CCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 166 SIICPSE------GF---------------------ISNAG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 166 ~vi~~~~------~~---------------------~~~aa-~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
.+|++.+ .+ +..++ .. .+..+||++||.......++...|..++.. ...
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~ 425 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLS 425 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHH
Confidence 9998621 00 01111 11 234699999998876554433333222211 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.....+...|++++.|.||++.
T Consensus 426 ~~la~e~~~~gI~vn~v~PG~v~ 448 (520)
T PRK06484 426 RSLACEWAPAGIRVNTVAPGYIE 448 (520)
T ss_pred HHHHHHhhhhCeEEEEEEeCCcc
Confidence 22222334578999999999873
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.2e-11 Score=106.89 Aligned_cols=132 Identities=17% Similarity=0.147 Sum_probs=82.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch--------
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-------- 173 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-------- 173 (265)
|+||||+|+||++++++|+++|++|++++|+..+........ ..|+.+ ..+.+.+.++|+||++...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~ 75 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG----YKPWAP-LAESEALEGADAVINLAGEPIADKRWT 75 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee----eecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence 689999999999999999999999999999886543221111 122322 4456778899999987210
Q ss_pred ----------------HHHHHHHhCCCC--EEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHH---HhCCC
Q 024643 174 ----------------FISNAGSLKGVQ--HVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESML---MASGI 226 (265)
Q Consensus 174 ----------------~~~~aa~~~gv~--r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l---~~~gl 226 (265)
.+.+++++.+++ +||+.|+.++|..... . .+..+...+ ..+...|..+ ++.++
T Consensus 76 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 155 (292)
T TIGR01777 76 EERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAEDLGT 155 (292)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhchhcCC
Confidence 133446677764 5666676666653211 1 001111111 1233334433 34689
Q ss_pred CEEEEeCCCccC
Q 024643 227 PYTIIRTGVLQN 238 (265)
Q Consensus 227 ~~tivRPg~l~~ 238 (265)
+++++||+.+..
T Consensus 156 ~~~ilR~~~v~G 167 (292)
T TIGR01777 156 RVVLLRTGIVLG 167 (292)
T ss_pred ceEEEeeeeEEC
Confidence 999999998654
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.4e-10 Score=101.08 Aligned_cols=135 Identities=19% Similarity=0.160 Sum_probs=88.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE-eCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc--------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------- 162 (265)
.+++++||||+|+||++++++|+++|++|++.. |+.++.++. .+..+..+.+|+.|.+++..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 367999999999999999999999999998875 443333221 13356778899999877654331
Q ss_pred -----CCCEEEEcCc----h---------H-------------HHHH-HHh-CCCCEEEEecccccccCCCCcccccchh
Q 024643 163 -----GVRSIICPSE----G---------F-------------ISNA-GSL-KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 -----~~d~vi~~~~----~---------~-------------~~~a-a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|.+|++.+ . + +..+ +.. ....+||++||...+.+.+....|..
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-- 160 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM-- 160 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHH--
Confidence 5899997621 0 0 0011 111 12359999999987654433323322
Q ss_pred HHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|++++.|.||++.
T Consensus 161 ---sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~ 192 (252)
T PRK12747 161 ---TKGAINTMTFTLAKQLGARGITVNAILPGFIK 192 (252)
T ss_pred ---HHHHHHHHHHHHHHHHhHcCCEEEEEecCCcc
Confidence 34333332 34579999999999873
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.9e-11 Score=101.21 Aligned_cols=132 Identities=14% Similarity=0.138 Sum_probs=89.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHc----CCCEEEEcCc--
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR----GVRSIICPSE-- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~----~~d~vi~~~~-- 172 (265)
|+++||||+|+||+++++.|+++|++|++++|+.++.+... ..+++++++|++|++++.++++ .+|.+|++.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~ 80 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPS 80 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCcc
Confidence 47999999999999999999999999999999887655432 2246788999999999887765 5798887621
Q ss_pred ---------hHH---H---------------------HHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHH
Q 024643 173 ---------GFI---S---------------------NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 217 (265)
Q Consensus 173 ---------~~~---~---------------------~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~ 217 (265)
.+. . ..++. -.+||++||... .....|...+. ....+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~----~~~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 81 WDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPENP----PAGSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred ccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCCC----CCccccHHHHHHHHHHHHHH
Confidence 010 0 00222 268999998751 11112222221 1122233
Q ss_pred HHHHHhCCCCEEEEeCCCcc
Q 024643 218 ESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l~ 237 (265)
...+...|++++.|.||++.
T Consensus 155 a~e~~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 155 AAVFGTRGITINAVACGRSV 174 (223)
T ss_pred HHHhhhcCeEEEEEecCccC
Confidence 33445679999999999874
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.2e-10 Score=99.29 Aligned_cols=140 Identities=9% Similarity=0.084 Sum_probs=94.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------c-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~- 162 (265)
..+++++||||+++||++++++|+++|++|+++.|+.++.++. .+..+..+.+|+.|++++.+++ .
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3568999999999999999999999999999999988765433 1345677889999999887655 3
Q ss_pred CCCEEEEcCc-----h---------HH-----------------HHHHHhCC-CCEEEEecccccccCCCCcccccchhH
Q 024643 163 GVRSIICPSE-----G---------FI-----------------SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~---------~~-----------------~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ . +. ...+.+.+ -.+||++||..... ....|...+.
T Consensus 83 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~---~~~~Y~asKa 159 (227)
T PRK08862 83 APDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ---DLTGVESSNA 159 (227)
T ss_pred CCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC---CcchhHHHHH
Confidence 5899887621 0 00 01133333 46999999865432 1112222221
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEeCCCccCC
Q 024643 211 --RKLAEQDESMLMASGIPYTIIRTGVLQNT 239 (265)
Q Consensus 211 --~~~k~~~E~~l~~~gl~~tivRPg~l~~~ 239 (265)
....+....++...+++++.|.||++...
T Consensus 160 al~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 160 LVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 11222333445568999999999998543
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2e-10 Score=100.40 Aligned_cols=137 Identities=9% Similarity=0.120 Sum_probs=94.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||+.++++|+++|++ |++++|+.++.... .+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35688999999999999999999999998 99999986544321 23457788999999998887664
Q ss_pred CCCEEEEcCch-----H---------------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSEG-----F---------------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~~-----~---------------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
++|.+|++... + +.++ +.+.+ ..++|++||...+........|..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~---- 159 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA---- 159 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH----
Confidence 57999987210 0 0111 22222 468999999887654433323322
Q ss_pred HHHHHHHHHH-------HhCCCCEEEEeCCCccC
Q 024643 212 KLAEQDESML-------MASGIPYTIIRTGVLQN 238 (265)
Q Consensus 212 ~~k~~~E~~l-------~~~gl~~tivRPg~l~~ 238 (265)
.|...|.+. ...+++++.++||++..
T Consensus 160 -sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t 192 (260)
T PRK06198 160 -SKGALATLTRNAAYALLRNRIRVNGLNIGWMAT 192 (260)
T ss_pred -HHHHHHHHHHHHHHHhcccCeEEEEEeeccccC
Confidence 343343332 24679999999998743
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.4e-11 Score=100.67 Aligned_cols=130 Identities=14% Similarity=0.219 Sum_probs=91.7
Q ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHcC---CCEEEEcCc--
Q 024643 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRG---VRSIICPSE-- 172 (265)
Q Consensus 103 lVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~~---~d~vi~~~~-- 172 (265)
+||||+|+||++++++|+++|++|++++|+.++..... +.+++++.+|++|++++.++++. +|.+|++.+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 59999999999999999999999999999876544321 34688999999999999988864 689998621
Q ss_pred --h-H---------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHh-----
Q 024643 173 --G-F---------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA----- 223 (265)
Q Consensus 173 --~-~---------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~----- 223 (265)
. + +..+....+.++||++||...+...+....|. ..|...+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~-----~sK~a~~~~~~~la~e~ 155 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQG-----AINAALEALARGLALEL 155 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHH-----HHHHHHHHHHHHHHHHh
Confidence 0 0 11112233567999999998875543322222 244444444332
Q ss_pred CCCCEEEEeCCCcc
Q 024643 224 SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ~gl~~tivRPg~l~ 237 (265)
.+++++.++||++.
T Consensus 156 ~~irv~~i~pg~~~ 169 (230)
T PRK07041 156 APVRVNTVSPGLVD 169 (230)
T ss_pred hCceEEEEeecccc
Confidence 35889999999863
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=8e-11 Score=101.84 Aligned_cols=133 Identities=17% Similarity=0.203 Sum_probs=87.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHcC-------CC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG-------VR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~-------~d 165 (265)
++++||||+|+||++++++|+++|++|+++ .|+.++..+. .+..+..+.+|+.|++++.++++. +|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 579999999999999999999999999875 4655443222 134578899999999998887754 57
Q ss_pred EEEEcCch--------------H-------------HHHH----HHhC---CCCEEEEecccccccCCCCc-ccccchhH
Q 024643 166 SIICPSEG--------------F-------------ISNA----GSLK---GVQHVILLSQLSVYRGSGGI-QALMKGNA 210 (265)
Q Consensus 166 ~vi~~~~~--------------~-------------~~~a----a~~~---gv~r~V~iSS~~v~~~~~~~-~~~~~~~~ 210 (265)
.+|++... + +..+ +.+. ..++||++||...+...+.. ..|..
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~--- 158 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAA--- 158 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHh---
Confidence 88877210 0 0000 1111 23579999998665433211 12222
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...+++++++|||++.
T Consensus 159 --sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~ 190 (247)
T PRK09730 159 --SKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIY 190 (247)
T ss_pred --HHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCc
Confidence 33333332 33468999999999974
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2e-10 Score=100.63 Aligned_cols=135 Identities=13% Similarity=0.120 Sum_probs=89.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
++++++||||+|+||++++++|+++|++|+++.+.. +..... .+..+.++.+|++|.+++.++++ .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999998887643 222211 24468889999999998887764 3
Q ss_pred CCEEEEcCch-------------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSEG-------------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+. + +..+ +...+.+++|+++|...+.+.+....|. ..
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~-----~s 162 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYT-----LS 162 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHH-----HH
Confidence 7999987210 0 1111 2223446889888865544332211222 24
Q ss_pred HHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
|..+|.+.+. .+++++.++||++.
T Consensus 163 K~a~~~~~~~la~~~~~~i~v~~i~PG~v~ 192 (258)
T PRK09134 163 KAALWTATRTLAQALAPRIRVNAIGPGPTL 192 (258)
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEeeccccc
Confidence 4444433321 24899999999864
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.4e-10 Score=99.09 Aligned_cols=135 Identities=16% Similarity=0.223 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||+.+++.|+++|++|++++|+..+.... .+..+.++++|++|.+++.++++ .
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999987654322 23467889999999988776554 3
Q ss_pred CCEEEEcCch----------------------H-----------------HHHHHHhC-CCCEEEEecccccccCCCCcc
Q 024643 164 VRSIICPSEG----------------------F-----------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQ 203 (265)
Q Consensus 164 ~d~vi~~~~~----------------------~-----------------~~~aa~~~-gv~r~V~iSS~~v~~~~~~~~ 203 (265)
+|.+|++.+. + ....+.+. .-.+||++||...+... ...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-~~~ 161 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-GQT 161 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCC-CCc
Confidence 6999987210 0 00012222 33579999987655322 222
Q ss_pred cccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 204 ALMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 204 ~~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|. ..|...+.+ +...+++++.++||++.
T Consensus 162 ~Y~-----~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~ 197 (253)
T PRK08217 162 NYS-----ASKAGVAAMTVTWAKELARYGIRVAAIAPGVIE 197 (253)
T ss_pred hhH-----HHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence 222 244333333 33478999999999874
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.2e-10 Score=99.33 Aligned_cols=134 Identities=16% Similarity=0.201 Sum_probs=87.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++++||||+|+||++++++|+++|++|++..++ +++.... .+..+.++.+|++|.+++.++++ .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999998877643 3322211 13457789999999998887775 57
Q ss_pred CEEEEcCc------hH---------------------HHHH----HHhC--C-CCEEEEecccccccCCCCc-ccccchh
Q 024643 165 RSIICPSE------GF---------------------ISNA----GSLK--G-VQHVILLSQLSVYRGSGGI-QALMKGN 209 (265)
Q Consensus 165 d~vi~~~~------~~---------------------~~~a----a~~~--g-v~r~V~iSS~~v~~~~~~~-~~~~~~~ 209 (265)
|.+|++.. .+ +..+ +.+. + -.+||++||.......... ..|.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~--- 158 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYA--- 158 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchH---
Confidence 99998711 00 0111 1111 1 2479999997654433211 1222
Q ss_pred HHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++||||++.
T Consensus 159 --~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~ 191 (248)
T PRK06123 159 --ASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIY 191 (248)
T ss_pred --HHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 244444443 23468999999999874
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.9e-10 Score=100.43 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=91.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cC-CccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~-~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
|+++||||+++||++++++|+ +|++|++++|+.+++++. .+ ..+.++.+|+.|++++.++++ .+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 599999999988665433 12 247789999999988876552 578
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
.+|++.+ . + +...+.+.+ -++||++||.....+.+....|..++.. .
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA 159 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence 8887511 0 0 001133332 3699999998765443333233332221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|++++.+.||++.
T Consensus 160 ~~~~la~el~~~~I~v~~v~PG~v~ 184 (246)
T PRK05599 160 FCQGLADSLHGSHVRLIIARPGFVI 184 (246)
T ss_pred HHHHHHHHhcCCCceEEEecCCccc
Confidence 1222233344578999999999874
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.5e-10 Score=99.23 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=91.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCC--CHHHHHHH------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS--NKKFLKTA------ 160 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~--d~~~l~~~------ 160 (265)
..++++|+||||+|+||.+++++|+++|++|++++|+.++...+ ....+.++.+|++ +.+++.++
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE 88 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence 44678999999999999999999999999999999987654322 1235677788885 55554433
Q ss_pred -HcCCCEEEEcCch--------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 161 -LRGVRSIICPSEG--------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 161 -~~~~d~vi~~~~~--------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
+..+|.+|++... + +.. .+.+.+.++||++||............|..
T Consensus 89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~- 167 (247)
T PRK08945 89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAV- 167 (247)
T ss_pred HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHH-
Confidence 3468999986210 0 011 134567789999999866544333222222
Q ss_pred hHHHHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
.|...+.++ ...++++++++||++.
T Consensus 168 ----sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~ 199 (247)
T PRK08945 168 ----SKFATEGMMQVLADEYQGTNLRVNCINPGGTR 199 (247)
T ss_pred ----HHHHHHHHHHHHHHHhcccCEEEEEEecCCcc
Confidence 343444433 2358999999999873
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.1e-10 Score=100.65 Aligned_cols=141 Identities=16% Similarity=0.075 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCC-----------cch----hhh--cCCccEEeeeCCCCHHHH
Q 024643 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK-----------RNA----MES--FGTYVESMAGDASNKKFL 157 (265)
Q Consensus 97 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~-----------~~~----~~~--~~~~v~~i~~D~~d~~~l 157 (265)
..+++++||||+| +||++++++|+++|++|++.+|+. ... +++ .+..+.++++|++|.+++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4578999999995 899999999999999999875431 111 111 234577889999999988
Q ss_pred HHHHc-------CCCEEEEcCc----h---------H-----------------HHHHHHhCCCCEEEEecccccccCCC
Q 024643 158 KTALR-------GVRSIICPSE----G---------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSG 200 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~~~----~---------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~ 200 (265)
.+++. ..|++|++.. . + +...+++.+-.+||++||.....+..
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 163 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMV 163 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCC
Confidence 87663 3689887611 0 0 11123444456999999987654433
Q ss_pred CcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 201 GIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 201 ~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+...|...+.. ...+.....+...+++++.|+||++.
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~ 202 (256)
T PRK12859 164 GELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTD 202 (256)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEcccc
Confidence 32233222211 11122233344578999999999874
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.24 E-value=2e-10 Score=110.75 Aligned_cols=139 Identities=14% Similarity=0.128 Sum_probs=95.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++++||||+++||++++++|+++|++|++++|+.++.+++ .+..+..+.+|++|++++.++++ .+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999999999999999988765443 23457789999999998877663 48999
Q ss_pred EEcCch-------H-------------------------HHHHHHhCCCC-EEEEecccccccCCCCcccccchhHH--H
Q 024643 168 ICPSEG-------F-------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 168 i~~~~~-------~-------------------------~~~aa~~~gv~-r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|++.+. + +...+++.+.+ +||++||.......+....|...+.. .
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~ 163 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVIS 163 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHH
Confidence 976210 0 01113333444 99999998776544333333322211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
..+.+...+...+++++.|+||++
T Consensus 164 l~~~la~e~~~~~i~v~~i~Pg~v 187 (520)
T PRK06484 164 LTRSLACEWAAKGIRVNAVLPGYV 187 (520)
T ss_pred HHHHHHHHhhhhCeEEEEEccCCc
Confidence 112223334457899999999986
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.23 E-value=1.6e-10 Score=115.07 Aligned_cols=137 Identities=14% Similarity=0.180 Sum_probs=94.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-------C-CccEEeeeCCCCHHHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------G-TYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~-~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.+..+... + ..+..+++|++|.+++.++++
T Consensus 411 ~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 411 TLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA 490 (676)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 345789999999999999999999999999999999876543321 1 246788999999999988775
Q ss_pred --CCCEEEEcCc-----h--------H-------------H----HHHHHhCC-CCEEEEecccccccCCCCcccccchh
Q 024643 163 --GVRSIICPSE-----G--------F-------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 --~~d~vi~~~~-----~--------~-------------~----~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
++|++|++.+ . + + ...++..+ ..+||++||..+..+......|.
T Consensus 491 ~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~--- 567 (676)
T TIGR02632 491 YGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS--- 567 (676)
T ss_pred cCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH---
Confidence 6899998711 0 0 0 01133333 35899999976654433222222
Q ss_pred HHHHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...+.++ ...|++++.|+||.+.
T Consensus 568 --aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~ 600 (676)
T TIGR02632 568 --AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVL 600 (676)
T ss_pred --HHHHHHHHHHHHHHHHhcccCeEEEEEECCcee
Confidence 2444444333 2368999999999864
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.6e-10 Score=97.10 Aligned_cols=136 Identities=8% Similarity=0.039 Sum_probs=88.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-------CCccEEeeeCCCC--HHHHHHHH------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASN--KKFLKTAL------ 161 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~~~v~~i~~D~~d--~~~l~~~~------ 161 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+... ...+..+.+|+.| .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 34679999999999999999999999999999999986554321 2346678899875 33443332
Q ss_pred --cCCCEEEEcCch------------------H---------H----HHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 162 --RGVRSIICPSEG------------------F---------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 162 --~~~d~vi~~~~~------------------~---------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
..+|.+|++.+. + + ...+...+..++|++||.....+......|.
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~-- 161 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFG-- 161 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchH--
Confidence 457999876210 0 0 1113345567999999976544332222222
Q ss_pred hHHHHHHHHHHHHH-------hC-CCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESMLM-------AS-GIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~l~-------~~-gl~~tivRPg~l~ 237 (265)
..|...+.+++ .. ++++++|+||++.
T Consensus 162 ---~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~ 195 (239)
T PRK08703 162 ---ASKAALNYLCKVAADEWERFGNLRANVLVPGPIN 195 (239)
T ss_pred ---HhHHHHHHHHHHHHHHhccCCCeEEEEEecCccc
Confidence 24444444332 23 6999999999874
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.8e-10 Score=99.81 Aligned_cols=138 Identities=11% Similarity=0.086 Sum_probs=90.0
Q ss_pred CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCcch---hhhcCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA---MESFGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 98 ~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~~~---~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
.+++++||||+ ++||++++++|+++|++|++.+|+.+.. .++....+.++++|++|++++.++++ .+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999 7999999999999999999999874322 12223457889999999988876553 478
Q ss_pred EEEEcCc--------h-H---------------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 166 SIICPSE--------G-F---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 166 ~vi~~~~--------~-~---------------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
++|++.+ . + +. ..++ . -.+||++||.+.....+....|..++.
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~-~-~g~Iv~iss~~~~~~~~~~~~Y~asKaa 163 (252)
T PRK06079 86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN-P-GASIVTLTYFGSERAIPNYNVMGIAKAA 163 (252)
T ss_pred EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc-c-CceEEEEeccCccccCCcchhhHHHHHH
Confidence 8887611 0 0 00 0122 1 268999999776543322222222211
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|.||++.
T Consensus 164 l~~l~~~la~el~~~gI~vn~i~PG~v~ 191 (252)
T PRK06079 164 LESSVRYLARDLGKKGIRVNAISAGAVK 191 (252)
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 112222333345579999999999874
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.22 E-value=2.9e-10 Score=98.19 Aligned_cols=136 Identities=18% Similarity=0.191 Sum_probs=88.7
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-chhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
|+||||+|+||.+++++|+++|++|++++|... +.... .+.++.++.+|++|.+++.++++ ..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999999999999887542 22211 23468899999999998877654 36788
Q ss_pred EEcCc-----hH---------------------HHHH-----HHhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 168 ICPSE-----GF---------------------ISNA-----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 168 i~~~~-----~~---------------------~~~a-----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
|++.+ .+ +..+ ++..+.++||++||.....+.+....|...+.. ...
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~ 160 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGAT 160 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHH
Confidence 87511 00 1111 123455799999997765444333333322221 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.....+...|++++.++||++.
T Consensus 161 ~~la~e~~~~gi~v~~v~Pg~v~ 183 (239)
T TIGR01831 161 KALAVELAKRKITVNCIAPGLID 183 (239)
T ss_pred HHHHHHHhHhCeEEEEEEEccCc
Confidence 22223334578999999999863
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.6e-10 Score=102.49 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
++++++||||+++||.+++++|+++| ++|++++|+.++.++. .+..+.++.+|++|.+++.++++ .
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999999999 9999999987654332 12357788999999998876653 4
Q ss_pred CCEEEEc
Q 024643 164 VRSIICP 170 (265)
Q Consensus 164 ~d~vi~~ 170 (265)
+|.+|++
T Consensus 82 iD~lI~n 88 (314)
T TIGR01289 82 LDALVCN 88 (314)
T ss_pred CCEEEEC
Confidence 8888876
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.9e-10 Score=97.58 Aligned_cols=73 Identities=15% Similarity=0.230 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc----chhh----h--cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAME----S--FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~----~~~~----~--~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
.+++++||||+|+||.++++.|+++|++|+++.++.. ..+. + .+..++++++|++|++++.++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999877775432 1111 1 13467889999999999887664
Q ss_pred --CCCEEEEc
Q 024643 163 --GVRSIICP 170 (265)
Q Consensus 163 --~~d~vi~~ 170 (265)
.+|.+|++
T Consensus 87 ~~~id~li~~ 96 (257)
T PRK12744 87 FGRPDIAINT 96 (257)
T ss_pred hCCCCEEEEC
Confidence 57999987
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.5e-10 Score=91.12 Aligned_cols=132 Identities=20% Similarity=0.250 Sum_probs=89.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhh-------h--cCCccEEeeeCCCCHHHHHHHHcC------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAME-------S--FGTYVESMAGDASNKKFLKTALRG------ 163 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~-------~--~~~~v~~i~~D~~d~~~l~~~~~~------ 163 (265)
++++||||+|+||.+++++|+++|+ .|+++.|+...... + .+..+.++.+|+++++++.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999996 68888887643221 1 234567889999999888776543
Q ss_pred -CCEEEEcCc-----h--------H-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 164 -VRSIICPSE-----G--------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 164 -~d~vi~~~~-----~--------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|.+|++.. . + +..+++..+.+++|++||.....+......|. ..|..
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~-----~sk~~ 155 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYA-----AANAF 155 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhH-----HHHHH
Confidence 588887621 0 0 12234455678999999976654433222221 23434
Q ss_pred HHHH---HHhCCCCEEEEeCCCc
Q 024643 217 DESM---LMASGIPYTIIRTGVL 236 (265)
Q Consensus 217 ~E~~---l~~~gl~~tivRPg~l 236 (265)
.+.+ +...+++++.+.||.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 156 LDALAAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHHHHHhcCCceEEEeeccc
Confidence 4443 4557999999999975
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=8e-10 Score=95.94 Aligned_cols=135 Identities=14% Similarity=0.145 Sum_probs=89.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhh----h--cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAME----S--FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~----~--~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++|+||||+|+||++++++|+++|++|++..|+. ..... . .+..+..+.+|++|++++.++++ .
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 357999999999999999999999999998877643 22111 1 12356788999999998877654 5
Q ss_pred CCEEEEcCc-----hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 164 VRSIICPSE-----GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 164 ~d~vi~~~~-----~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++|++.+ .+ +.+++.. ...++||++||..++.+..+...|.. .|.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~-----sK~ 159 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGA-----MKA 159 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHH-----HHH
Confidence 799998721 00 0111111 12358999999887755443322222 444
Q ss_pred HHHHHHH----h--CCCCEEEEeCCCcc
Q 024643 216 QDESMLM----A--SGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~----~--~gl~~tivRPg~l~ 237 (265)
..|.+.+ + .++.+++++||++.
T Consensus 160 ~~~~~~~~l~~~~~~~i~v~~v~Pg~i~ 187 (252)
T PRK06077 160 AVINLTKYLALELAPKIRVNAIAPGFVK 187 (252)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 4443332 1 37899999999874
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.2e-09 Score=98.87 Aligned_cols=140 Identities=11% Similarity=0.015 Sum_probs=89.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc----------chhhh------cCCccEEeeeCCCCHHHHHHH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----------NAMES------FGTYVESMAGDASNKKFLKTA 160 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~----------~~~~~------~~~~v~~i~~D~~d~~~l~~~ 160 (265)
..+++++||||+++||++++++|++.|++|++++|+.. +.+.. .+..+.++++|++|++++.++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 35689999999999999999999999999999999742 22111 123567889999999988766
Q ss_pred Hc-------CCCEEEEcC-c--------h-H-------------------------HHHHHHhCCCCEEEEecccccccC
Q 024643 161 LR-------GVRSIICPS-E--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRG 198 (265)
Q Consensus 161 ~~-------~~d~vi~~~-~--------~-~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~ 198 (265)
++ .+|++|++. + . + +...+.+.+-.+||++||......
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~ 165 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN 165 (305)
T ss_pred HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence 53 478888653 2 1 0 000133344469999998654221
Q ss_pred CCC---cccccchhH--HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 199 SGG---IQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 199 ~~~---~~~~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
..+ ...|...+. ....+.....+...|++++.|.||++
T Consensus 166 ~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v 208 (305)
T PRK08303 166 ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWL 208 (305)
T ss_pred CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCcc
Confidence 111 111221111 11112223334557899999999987
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.8e-10 Score=98.26 Aligned_cols=139 Identities=16% Similarity=0.101 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC---------cchhhh------cCCccEEeeeCCCCHHHHHHHH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAMES------FGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~---------~~~~~~------~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
..+++++||||+++||++++++|+++|++|++++|+. ++.... .+..+.++.+|++|.+++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3568999999999999999999999999999988765 322221 1345778899999998887655
Q ss_pred -------cCCCEEEEcCch-------------H-------------HHH----HHHhC---C---CCEEEEecccccccC
Q 024643 162 -------RGVRSIICPSEG-------------F-------------ISN----AGSLK---G---VQHVILLSQLSVYRG 198 (265)
Q Consensus 162 -------~~~d~vi~~~~~-------------~-------------~~~----aa~~~---g---v~r~V~iSS~~v~~~ 198 (265)
..+|.+|++.+. + +.. .++.. + ..+||++||.....+
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 357999986210 0 001 12221 1 258999999876554
Q ss_pred CCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCC
Q 024643 199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGV 235 (265)
Q Consensus 199 ~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~ 235 (265)
......|...+.. ...+.....+...|++++.|.||.
T Consensus 164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg~ 202 (286)
T PRK07791 164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPAA 202 (286)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCCC
Confidence 4333233222211 112222333455799999999993
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.5e-10 Score=99.18 Aligned_cols=120 Identities=12% Similarity=0.088 Sum_probs=79.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc--
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE-- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~-- 172 (265)
...|+||||||+||||++|+++|+++|++|+... .|+.|.+.+...++ ++|+|||+..
T Consensus 7 ~~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~~D~ViH~Aa~~ 68 (298)
T PLN02778 7 SATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------GRLENRASLEADIDAVKPTHVFNAAGVT 68 (298)
T ss_pred CCCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------CccCCHHHHHHHHHhcCCCEEEECCccc
Confidence 3468999999999999999999999999987432 34556666766665 6899998711
Q ss_pred ---h--------------------HHHHHHHhCCCCEEEEecccccccCCC--------Cc---c-cccchhHH-HHHHH
Q 024643 173 ---G--------------------FISNAGSLKGVQHVILLSQLSVYRGSG--------GI---Q-ALMKGNAR-KLAEQ 216 (265)
Q Consensus 173 ---~--------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~--------~~---~-~~~~~~~~-~~k~~ 216 (265)
. .+.++|++.+++++ ++||..+|.... +. . +..+...| ..|..
T Consensus 69 ~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~~v-~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~ 147 (298)
T PLN02778 69 GRPNVDWCESHKVETIRANVVGTLTLADVCRERGLVLT-NYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAM 147 (298)
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEE-EEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHH
Confidence 0 03344777888654 555555543210 01 1 11122334 58999
Q ss_pred HHHHHHhCCCCEEEEeCCCc
Q 024643 217 DESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l 236 (265)
+|.++.... +..++|+++.
T Consensus 148 ~E~~~~~y~-~~~~lr~~~~ 166 (298)
T PLN02778 148 VEELLKNYE-NVCTLRVRMP 166 (298)
T ss_pred HHHHHHHhh-ccEEeeeccc
Confidence 999987653 5678888763
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.16 E-value=9e-10 Score=94.96 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=53.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH---cCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL---RGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~---~~~d~vi~~ 170 (265)
|+|+||||+|+||++++++|+++| +.|.+..|+.... .....+.++++|++|.+++.++. .++|++|++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~ 74 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINC 74 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 589999999999999999999986 5666666654321 22356888999999998876644 578999987
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.16 E-value=5.5e-10 Score=97.87 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=87.4
Q ss_pred EEEEEcCCcHHHHHHHHHHHH----CCCeEEEEEeCCcchhhh----c----CCccEEeeeCCCCHHHHHHHHcCC----
Q 024643 101 AVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMES----F----GTYVESMAGDASNKKFLKTALRGV---- 164 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~----~G~~V~~~~R~~~~~~~~----~----~~~v~~i~~D~~d~~~l~~~~~~~---- 164 (265)
.++||||+++||.+++++|++ .|++|++++|+.+++++. . +..+.++.+|++|++++.++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 799999999987654432 1 235788999999999888766421
Q ss_pred -------CEEEEcCc------h-H--------------------------HHHHHHhC-C-CCEEEEecccccccCCCCc
Q 024643 165 -------RSIICPSE------G-F--------------------------ISNAGSLK-G-VQHVILLSQLSVYRGSGGI 202 (265)
Q Consensus 165 -------d~vi~~~~------~-~--------------------------~~~aa~~~-g-v~r~V~iSS~~v~~~~~~~ 202 (265)
|.+|++.+ . . +...++.. + ..+||++||.....+.+..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 45665411 0 0 00112222 2 3589999998765443322
Q ss_pred ccccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 203 QALMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 203 ~~~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|. ..|...+.+ +...|+.++.+.||++.
T Consensus 162 ~~Y~-----asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~ 198 (256)
T TIGR01500 162 ALYC-----AGKAARDMLFQVLALEEKNPNVRVLNYAPGVLD 198 (256)
T ss_pred hHHH-----HHHHHHHHHHHHHHHHhcCCCeEEEEecCCccc
Confidence 2222 233333332 33478999999999874
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1e-09 Score=97.51 Aligned_cols=139 Identities=9% Similarity=0.026 Sum_probs=89.7
Q ss_pred CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCcch---hhhcC--CccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNA---MESFG--TYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~~~---~~~~~--~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||++ +||++++++|+++|++|++..|+.... +++.. .....+++|++|.+++.++++
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 3468999999997 999999999999999999998875322 22211 123568899999998876653
Q ss_pred CCCEEEEcCc---------hH---------------------HH----HHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 GVRSIICPSE---------GF---------------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ~~d~vi~~~~---------~~---------------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ .+ +. ..++ .+ .+||++||.+.....+....|...
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~-~~-G~Iv~isS~~~~~~~~~~~~Y~as 162 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP-DG-GSMLTLTYGGSTRVMPNYNVMGVA 162 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc-cC-ceEEEEcCCCccccCCccchhhhh
Confidence 5788887611 11 00 0022 22 689999998664433222222222
Q ss_pred hH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+. ....+.+...+...|++++.|.||++.
T Consensus 163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~ 193 (271)
T PRK06505 163 KAALEASVRYLAADYGPQGIRVNAISAGPVR 193 (271)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCCcc
Confidence 21 112233334455689999999999874
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.3e-09 Score=95.98 Aligned_cols=140 Identities=13% Similarity=0.095 Sum_probs=89.4
Q ss_pred CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCC---cchhhh----cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---RNAMES----FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 98 ~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~---~~~~~~----~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
.+++++||||+ ++||++++++|+++|++|++.+|+. +..+++ .+.++.++++|++|++++.++++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46899999997 8999999999999999999987753 222222 13457789999999998876653
Q ss_pred -CCCEEEEcCc---------hH---------------------HHHHHH-h-CCCCEEEEecccccccCCCCcccccchh
Q 024643 163 -GVRSIICPSE---------GF---------------------ISNAGS-L-KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 -~~d~vi~~~~---------~~---------------------~~~aa~-~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|.+|++.+ .+ +..++. . ..-.+||++||.....+.+....|..++
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 165 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAK 165 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHH
Confidence 4788886511 00 000111 0 1225899999987654332222222222
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+.....+...|++++.|.||++.
T Consensus 166 aal~~l~~~la~el~~~gIrvn~v~PG~v~ 195 (257)
T PRK08594 166 ASLEASVKYLANDLGKDGIRVNAISAGPIR 195 (257)
T ss_pred HHHHHHHHHHHHHhhhcCCEEeeeecCccc
Confidence 1 111222233344579999999999874
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.3e-09 Score=96.88 Aligned_cols=70 Identities=17% Similarity=0.204 Sum_probs=56.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c--CCccEEeeeCCCCHHHHHHHHc------CCCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F--GTYVESMAGDASNKKFLKTALR------GVRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~--~~~v~~i~~D~~d~~~l~~~~~------~~d~ 166 (265)
+++++|||| |+||++++++|. +|++|++++|+.++.++. . +..+.++++|++|.+++.++++ .+|.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 578999998 699999999996 899999999987654322 1 3357789999999998887764 4899
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
+|++
T Consensus 80 li~n 83 (275)
T PRK06940 80 LVHT 83 (275)
T ss_pred EEEC
Confidence 9987
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.14 E-value=7.5e-10 Score=97.45 Aligned_cols=138 Identities=12% Similarity=0.037 Sum_probs=88.4
Q ss_pred CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCc------chhhhc--CCccEEeeeCCCCHHHHHHHHc-----
Q 024643 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR------NAMESF--GTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 98 ~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~------~~~~~~--~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
.+++++||||+ ++||++++++|+++|++|++..|+.+ ...++. ...+.++++|++|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46889999986 79999999999999999988866432 122221 2246688999999999876653
Q ss_pred --CCCEEEEcCc---------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCccccc
Q 024643 163 --GVRSIICPSE---------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 163 --~~d~vi~~~~---------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
.+|.+|++.+ .+ +...+++ -++||++||.....+.+....|.
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~ 162 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMG 162 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhh
Confidence 5788887621 11 0011332 26899999976654332222222
Q ss_pred chhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 207 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+. ....+.....+...|++++.|.||++.
T Consensus 163 asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~ 195 (258)
T PRK07370 163 VAKAALEASVRYLAAELGPKNIRVNAISAGPIR 195 (258)
T ss_pred HHHHHHHHHHHHHHHHhCcCCeEEEEEecCccc
Confidence 2221 112222333344578999999999874
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.6e-09 Score=95.09 Aligned_cols=74 Identities=14% Similarity=0.164 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++++||||+|+||++++++|+++|++|++++|+. +..+.........+.+|++|.+++.+.+..+|++|++
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnn 86 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILN 86 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEEC
Confidence 3468999999999999999999999999999999986 2222111122367889999999999999999999987
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.4e-09 Score=95.89 Aligned_cols=139 Identities=12% Similarity=0.094 Sum_probs=89.2
Q ss_pred CCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeCCc---chhhhc--CCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~--~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++|||| +++||++++++|+++|++|++..|+.. .++++. ......+++|++|++++.++++ .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4679999997 679999999999999999998876532 222221 1234578999999998876653 5
Q ss_pred CCEEEEcC---c------hHHHH--------------------------HHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 164 VRSIICPS---E------GFISN--------------------------AGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 164 ~d~vi~~~---~------~~~~~--------------------------aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
+|++|++. . .++.+ .++.. -.+||++||.+...+.+....|...
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~as 163 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMA 163 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhH
Confidence 88998771 1 11000 02222 2689999998765443322233222
Q ss_pred hH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+. ....+.....+...|++++.|.||++.
T Consensus 164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~ 194 (261)
T PRK08690 164 KASLEAGIRFTAACLGKEGIRCNGISAGPIK 194 (261)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 21 112223333455689999999999874
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.5e-10 Score=100.40 Aligned_cols=134 Identities=19% Similarity=0.129 Sum_probs=92.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....++|+||||.||||++|++.|..+||.|++++--.....+. -...++.+..|+..+ ++.++|.|++.
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhL 98 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHL 98 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhh
Confidence 33458999999999999999999999999999998644322211 235677788887664 66777777754
Q ss_pred ----Cc-h-----------------HHHHHHHhCCCCEEEEecccccccCCCCc----------ccccchhHH-HHHHHH
Q 024643 171 ----SE-G-----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMKGNAR-KLAEQD 217 (265)
Q Consensus 171 ----~~-~-----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----------~~~~~~~~~-~~k~~~ 217 (265)
++ . ...-.|++.+ +||++.||..+|+.+... ++..+...| ..|+.+
T Consensus 99 Aapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~a 177 (350)
T KOG1429|consen 99 AAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVA 177 (350)
T ss_pred ccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHH
Confidence 11 0 1222355555 799999999999764211 233333333 467778
Q ss_pred HHHHH----hCCCCEEEEeCCC
Q 024643 218 ESMLM----ASGIPYTIIRTGV 235 (265)
Q Consensus 218 E~~l~----~~gl~~tivRPg~ 235 (265)
|.++. +.|+.+.|.|+-.
T Consensus 178 E~L~~~y~k~~giE~rIaRifN 199 (350)
T KOG1429|consen 178 ETLCYAYHKQEGIEVRIARIFN 199 (350)
T ss_pred HHHHHHhhcccCcEEEEEeeec
Confidence 87764 4789999999974
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.7e-09 Score=97.74 Aligned_cols=135 Identities=14% Similarity=0.118 Sum_probs=90.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-chhh----h--cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME----S--FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++.+++.. ..+. + .+..+.++.+|++|.+++.++++
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g 88 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLG 88 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhC
Confidence 455789999999999999999999999999999887532 2221 1 23467889999999988877664
Q ss_pred CCCEEEEcCc----h---------H-------------HHHH----HHhC-------CCCEEEEecccccccCCCCcccc
Q 024643 163 GVRSIICPSE----G---------F-------------ISNA----GSLK-------GVQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 163 ~~d~vi~~~~----~---------~-------------~~~a----a~~~-------gv~r~V~iSS~~v~~~~~~~~~~ 205 (265)
.+|++|++.+ . + +..+ ++.. ...+||++||............|
T Consensus 89 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 168 (306)
T PRK07792 89 GLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANY 168 (306)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchH
Confidence 5899998611 0 0 1111 1111 12589999998765443322222
Q ss_pred cchhHHHHHHHHHH-------HHHhCCCCEEEEeCCC
Q 024643 206 MKGNARKLAEQDES-------MLMASGIPYTIIRTGV 235 (265)
Q Consensus 206 ~~~~~~~~k~~~E~-------~l~~~gl~~tivRPg~ 235 (265)
.. .|...+. .+..+|++++.|.||.
T Consensus 169 ~a-----sKaal~~l~~~la~e~~~~gI~vn~i~Pg~ 200 (306)
T PRK07792 169 GA-----AKAGITALTLSAARALGRYGVRANAICPRA 200 (306)
T ss_pred HH-----HHHHHHHHHHHHHHHhhhcCeEEEEECCCC
Confidence 22 3333333 2345799999999985
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.13 E-value=1e-09 Score=117.09 Aligned_cols=140 Identities=19% Similarity=0.221 Sum_probs=99.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeCCcchhh---h-------------cCCccEEeeeCCCC-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAME---S-------------FGTYVESMAGDASN----- 153 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G----~~V~~~~R~~~~~~~---~-------------~~~~v~~i~~D~~d----- 153 (265)
.++|+|||||||+|.+++++|++++ ++|+++.|+...... + ....++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999987 899999997543211 1 11368899999974
Q ss_pred -HHHHHHHHcCCCEEEEcCch-------------------HHHHHHHhCCCCEEEEecccccccCCC-------------
Q 024643 154 -KKFLKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGSG------------- 200 (265)
Q Consensus 154 -~~~l~~~~~~~d~vi~~~~~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~------------- 200 (265)
.+.+.++.+++|+|||+... .+.+++...++++|+|+||.+++....
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~ 1130 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGG 1130 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccC
Confidence 45667777899999987210 133446677889999999998874210
Q ss_pred -Cc--c-cc------cchhHHHHHHHHHHHHHh---CCCCEEEEeCCCccC
Q 024643 201 -GI--Q-AL------MKGNARKLAEQDESMLMA---SGIPYTIIRTGVLQN 238 (265)
Q Consensus 201 -~~--~-~~------~~~~~~~~k~~~E~~l~~---~gl~~tivRPg~l~~ 238 (265)
.. . .. ....+...|..+|.++.. .|++++++|||.+..
T Consensus 1131 ~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G 1181 (1389)
T TIGR03443 1131 AGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTG 1181 (1389)
T ss_pred CCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCcccc
Confidence 00 0 00 011233578888888754 589999999998754
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2e-09 Score=95.82 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=88.6
Q ss_pred CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCc---chhhh---cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES---FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~---~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+++++||||+ ++||++++++|+++|++|++.+|+.+ ..+++ .+.. ..+++|++|.+++.++++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~g 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDLG 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999997 79999999999999999999998742 22222 1223 578999999998876653
Q ss_pred CCCEEEEcCc--------h-H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 GVRSIICPSE--------G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ~~d~vi~~~~--------~-~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ . + +...+++ + .+||++||.+...+.+....|..+
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~-~-g~Iv~isS~~~~~~~~~~~~Y~as 160 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND-G-ASVLTLSYLGGVKYVPHYNVMGVA 160 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc-C-CcEEEEecCCCccCCCcchhhhhH
Confidence 4788887621 1 0 0001222 2 589999997654433222222222
Q ss_pred hH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+. ....+.....+...|++++.|.||++.
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~ 191 (274)
T PRK08415 161 KAALESSVRYLAVDLGKKGIRVNAISAGPIK 191 (274)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccc
Confidence 21 112222333345579999999999874
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.6e-09 Score=91.30 Aligned_cols=126 Identities=15% Similarity=0.198 Sum_probs=82.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc---CCCEEEEcCch---
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSEG--- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~~--- 173 (265)
|+++||||+|+||++++++|+++ ++|++++|+.. .+++|++|.++++++++ .+|.+|++.+.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~ 68 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVHF 68 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCCC
Confidence 57999999999999999999999 99999998753 36799999999988776 68999977210
Q ss_pred ----------H-------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHH--HHHHHHHHHHHhCCC
Q 024643 174 ----------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGI 226 (265)
Q Consensus 174 ----------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~E~~l~~~gl 226 (265)
+ +..++.. .+..+|+++||.....+.+....|...+.. ...+.....+ ..|+
T Consensus 69 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi 147 (199)
T PRK07578 69 APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGI 147 (199)
T ss_pred CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCe
Confidence 0 0111110 123589999987765433322222222110 0111111122 5689
Q ss_pred CEEEEeCCCccC
Q 024643 227 PYTIIRTGVLQN 238 (265)
Q Consensus 227 ~~tivRPg~l~~ 238 (265)
+++.|+||++.+
T Consensus 148 ~v~~i~Pg~v~t 159 (199)
T PRK07578 148 RINVVSPTVLTE 159 (199)
T ss_pred EEEEEcCCcccC
Confidence 999999999754
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.8e-10 Score=99.86 Aligned_cols=134 Identities=21% Similarity=0.227 Sum_probs=85.2
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-CCCEEEEcCch-------
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSIICPSEG------- 173 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-~~d~vi~~~~~------- 173 (265)
|+||||||+||++|+.+|.+.||+|++++|++.+.....+..++ ..+.+.+... ++|+||+..+.
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~~v~-------~~~~~~~~~~~~~DavINLAG~~I~~rrW 73 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHPNVT-------LWEGLADALTLGIDAVINLAGEPIAERRW 73 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCcccc-------ccchhhhcccCCCCEEEECCCCccccccC
Confidence 68999999999999999999999999999999887665554433 2233444444 79999976211
Q ss_pred -----------------HHHHHHH--hCCCCEEEEecccccccCCCCc-----ccccchhHHHHHHHHHHHH---HhCCC
Q 024643 174 -----------------FISNAGS--LKGVQHVILLSQLSVYRGSGGI-----QALMKGNARKLAEQDESML---MASGI 226 (265)
Q Consensus 174 -----------------~~~~aa~--~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~~~k~~~E~~l---~~~gl 226 (265)
.+.++.. +.+.+.+|.-|.++.|+..... .+.............|+.. +..|.
T Consensus 74 t~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gt 153 (297)
T COG1090 74 TEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGT 153 (297)
T ss_pred CHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCc
Confidence 1222232 4556666666666666544211 1111111112333444443 34689
Q ss_pred CEEEEeCCCccCCCCC
Q 024643 227 PYTIIRTGVLQNTPGG 242 (265)
Q Consensus 227 ~~tivRPg~l~~~~~~ 242 (265)
+++++|.|.+....++
T Consensus 154 RvvllRtGvVLs~~GG 169 (297)
T COG1090 154 RVVLLRTGVVLSPDGG 169 (297)
T ss_pred eEEEEEEEEEecCCCc
Confidence 9999999987665544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=2.9e-09 Score=93.65 Aligned_cols=139 Identities=12% Similarity=-0.001 Sum_probs=88.3
Q ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCcc---hhhhc--CCccEEeeeCCCCHHHHHHHH-------c
Q 024643 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRN---AMESF--GTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 97 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~~--~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
..+++++||||+ ++||++++++|+++|++|++.+|+.+. .+++. ...+.++.+|++|.+++.+++ .
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 457899999998 599999999999999999999998542 12221 123567899999999887665 3
Q ss_pred CCCEEEEcCc--------h---------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 GVRSIICPSE--------G---------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ~~d~vi~~~~--------~---------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ . + ....+++ -.+||++||.+.....+....|...
T Consensus 88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~as 165 (258)
T PRK07533 88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPV 165 (258)
T ss_pred CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHH
Confidence 4788887611 0 0 0001222 2589999997664332222122211
Q ss_pred hH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+. ....+.....+...|++++.|.||++.
T Consensus 166 Kaal~~l~~~la~el~~~gI~Vn~v~PG~v~ 196 (258)
T PRK07533 166 KAALESSVRYLAAELGPKGIRVHAISPGPLK 196 (258)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCCcC
Confidence 11 111122233344579999999999873
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.3e-09 Score=94.24 Aligned_cols=140 Identities=15% Similarity=0.187 Sum_probs=102.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----cC-CccEEeeeCCCCHHHHHHHH-------cCCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FG-TYVESMAGDASNKKFLKTAL-------RGVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~-~~v~~i~~D~~d~~~l~~~~-------~~~d 165 (265)
.+..||||||++++|++++.+++++|..+++.+.+.+..++. .. ..+....+|++|++.+.+.. ..++
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 478999999999999999999999999999999887654332 11 26889999999998876544 3577
Q ss_pred EEEEcCc------------hH------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 166 SIICPSE------------GF------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 166 ~vi~~~~------------~~------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
++|+..+ .. +...|.+..-+|||.++|..+..+..+..+|..++. ...
T Consensus 117 ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGf 196 (300)
T KOG1201|consen 117 ILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGF 196 (300)
T ss_pred EEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHH
Confidence 7776511 00 112266677789999999988877766666665543 234
Q ss_pred HHHHHHHHHh---CCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMA---SGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~---~gl~~tivRPg~l~ 237 (265)
++....+++. .|++.|.+.|+.+.
T Consensus 197 hesL~~EL~~~~~~~IktTlv~P~~i~ 223 (300)
T KOG1201|consen 197 HESLSMELRALGKDGIKTTLVCPYFIN 223 (300)
T ss_pred HHHHHHHHHhcCCCCeeEEEEeeeecc
Confidence 5555555554 56889999999864
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.6e-09 Score=94.51 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=88.5
Q ss_pred CCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCc---chhhhc--CCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~--~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||++ +||+++++.|+++|++|++.+|+.. ..+++. ...+..+.+|++|++++.++++ .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 468999999985 9999999999999999999888731 222221 2345678999999999887663 4
Q ss_pred CCEEEEcCc-----h-----H---------------------HHHH---HHhCCCCEEEEecccccccCCCCcccccchh
Q 024643 164 VRSIICPSE-----G-----F---------------------ISNA---GSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 164 ~d~vi~~~~-----~-----~---------------------~~~a---a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
+|.+|++.+ . + +..+ +...+ .+||++||.+...+.+....|..++
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~Iv~iss~~~~~~~~~~~~Y~asK 163 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG-SALLTLSYLGAERAIPNYNVMGLAK 163 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCC-cEEEEEecCCCCCCCCCcchhHHHH
Confidence 789887621 0 0 0001 11122 5899999987643322222222211
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+.....+...|++++.|.||++.
T Consensus 164 aal~~l~~~la~el~~~gIrVn~i~PG~v~ 193 (262)
T PRK07984 164 ASLEANVRYMANAMGPEGVRVNAISAGPIR 193 (262)
T ss_pred HHHHHHHHHHHHHhcccCcEEeeeecCccc
Confidence 1 112222333344579999999999874
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.2e-09 Score=101.95 Aligned_cols=142 Identities=16% Similarity=0.141 Sum_probs=92.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc--chhhh-cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAMES-FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~--~~~~~-~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
..++++++||||+|+||..+++.|+++|++|++++|... ...+. ...+..++.+|++|.+++.++++ .+|
T Consensus 207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCC
Confidence 446789999999999999999999999999999988532 22221 11235688999999998877664 579
Q ss_pred EEEEcCch-------------H-------------HHHHHHh----CCCCEEEEecccccccCCCCcccccchhHH--HH
Q 024643 166 SIICPSEG-------------F-------------ISNAGSL----KGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 213 (265)
Q Consensus 166 ~vi~~~~~-------------~-------------~~~aa~~----~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~ 213 (265)
.+|++.+. + +..++.. ..-.+||++||............|...+.. ..
T Consensus 287 ~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~ 366 (450)
T PRK08261 287 IVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGL 366 (450)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHH
Confidence 99987210 0 1111111 223689999998765443332233222210 11
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.......+...|++++.|.||++.
T Consensus 367 ~~~la~el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 367 VQALAPLLAERGITINAVAPGFIE 390 (450)
T ss_pred HHHHHHHHhhhCcEEEEEEeCcCc
Confidence 122233345579999999999874
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.4e-09 Score=96.77 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=55.6
Q ss_pred EEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 103 LVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 103 lVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
+||||+++||.+++++|+++| ++|++.+|+.++.+.. .+..+.++++|++|.+++.++++ .+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 599999999999999999999 9999999987654332 12357788999999998876653 478888
Q ss_pred Ec
Q 024643 169 CP 170 (265)
Q Consensus 169 ~~ 170 (265)
++
T Consensus 81 nn 82 (308)
T PLN00015 81 CN 82 (308)
T ss_pred EC
Confidence 76
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.07 E-value=6.3e-09 Score=94.54 Aligned_cols=146 Identities=14% Similarity=0.129 Sum_probs=95.6
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHHc---
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
.....+++++|||||++||.+++++|+.+|.+|++.+|+.++.++. ....+.++++|++|.++++++.+
T Consensus 30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3455668999999999999999999999999999999998655433 23467789999999999987654
Q ss_pred ----CCCEEEEcCc-----------hH-----------------HHHHHHhCCCCEEEEecccccccC-C----CCcc-c
Q 024643 163 ----GVRSIICPSE-----------GF-----------------ISNAGSLKGVQHVILLSQLSVYRG-S----GGIQ-A 204 (265)
Q Consensus 163 ----~~d~vi~~~~-----------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~-~----~~~~-~ 204 (265)
..|++|++.+ ++ +.+.++.....|||++||...... . .+.. .
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~ 189 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAK 189 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhcc
Confidence 4677776511 11 233355555589999999765110 0 0001 1
Q ss_pred -ccchhHH-HHHHHH----HHHHHh--CCCCEEEEeCCCccCC
Q 024643 205 -LMKGNAR-KLAEQD----ESMLMA--SGIPYTIIRTGVLQNT 239 (265)
Q Consensus 205 -~~~~~~~-~~k~~~----E~~l~~--~gl~~tivRPg~l~~~ 239 (265)
+.....| .+|.+. .++.+. .|+.++.+.||.+...
T Consensus 190 ~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 190 LYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred CccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 2222222 233322 112221 2899999999987443
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.2e-09 Score=92.79 Aligned_cols=138 Identities=9% Similarity=-0.023 Sum_probs=88.0
Q ss_pred CCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCc---chhhhcC--CccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~~--~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||++ +||++++++|+++|++|++..|+.. ..+++.. ....++++|++|++++.++++ .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467899999997 8999999999999999999888742 1222211 123457899999998887663 4
Q ss_pred CCEEEEcCc---------hH-------H--------------H----HHHHhCCCCEEEEecccccccCCCCcccccchh
Q 024643 164 VRSIICPSE---------GF-------I--------------S----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 164 ~d~vi~~~~---------~~-------~--------------~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
+|++|++.. .+ + . ..+++ -.+||++||.......+....|..++
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (260)
T PRK06603 87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVAK 164 (260)
T ss_pred ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhHH
Confidence 788887511 00 0 0 00221 25899999976654332222332222
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+.....+...|++++.|.||++.
T Consensus 165 aal~~l~~~la~el~~~gIrVn~v~PG~v~ 194 (260)
T PRK06603 165 AALEASVKYLANDMGENNIRVNAISAGPIK 194 (260)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcCc
Confidence 1 112223333455689999999999874
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=2.2e-09 Score=95.70 Aligned_cols=139 Identities=12% Similarity=0.032 Sum_probs=98.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHH----HHHHHHcCCCEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKK----FLKTALRGVRSI 167 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~----~l~~~~~~~d~v 167 (265)
+.+.+|||||++||++.+++|+++|++|++++|+++|++.. .+-.+.++..|+++.+ .+.+.+.+.|+=
T Consensus 49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 47999999999999999999999999999999999887654 3346888999997654 477777887765
Q ss_pred EEc--------CchH--------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH-
Q 024643 168 ICP--------SEGF--------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK- 212 (265)
Q Consensus 168 i~~--------~~~~--------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~- 212 (265)
|+. .+.. +..-|.+.+-+-||++||.+...+.+....|...+.+-
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~ 208 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVD 208 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHH
Confidence 533 1111 01115556667899999987766554443343333321
Q ss_pred -HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 -LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 -~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+......+.+..|+.+-.+-|..+.
T Consensus 209 ~~S~~L~~Ey~~~gI~Vq~v~p~~Va 234 (312)
T KOG1014|consen 209 FFSRCLQKEYESKGIFVQSVIPYLVA 234 (312)
T ss_pred HHHHHHHHHHHhcCeEEEEeehhhee
Confidence 2345556677789998888888754
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.8e-09 Score=92.03 Aligned_cols=143 Identities=16% Similarity=0.154 Sum_probs=102.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc----CCccEEeeeCCCCHHHHHHHHc---------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALR---------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~----~~~v~~i~~D~~d~~~l~~~~~---------~ 163 (265)
...+.|+|||+..+.|..++++|.++|+.|.+-+-+++.++.+. .+....++.|++++++++++.+ +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 34678999999999999999999999999999998887766552 4678889999999999998764 3
Q ss_pred CCEEEEcCch--------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 164 VRSIICPSEG--------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 164 ~d~vi~~~~~--------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
.-.+|++.+- + +....+ ..-+|+|++||.....+.+...+|..+++.
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr-~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aV 185 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR-RARGRVVNVSSVLGRVALPALGPYCVSKFAV 185 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH-hccCeEEEecccccCccCcccccchhhHHHH
Confidence 3455554210 0 001122 234699999999886555445555544431
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCccCCC
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQNTP 240 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~~~~ 240 (265)
.......+++...|+++.+|-||.+...-
T Consensus 186 eaf~D~lR~EL~~fGV~VsiiePG~f~T~l 215 (322)
T KOG1610|consen 186 EAFSDSLRRELRPFGVKVSIIEPGFFKTNL 215 (322)
T ss_pred HHHHHHHHHHHHhcCcEEEEeccCcccccc
Confidence 23344556677899999999999775443
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.05 E-value=4.6e-09 Score=92.61 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=53.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh-------cCCccEEeeeCCCCHHHH----HHHH------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES-------FGTYVESMAGDASNKKFL----KTAL------ 161 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~-------~~~~v~~i~~D~~d~~~l----~~~~------ 161 (265)
++++||||+++||++++++|+++|++|+++.|+ .++.+.+ .+..+..+.+|++|.+++ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 579999999999999999999999999998764 3333221 123466789999998754 2322
Q ss_pred -cCCCEEEEc
Q 024643 162 -RGVRSIICP 170 (265)
Q Consensus 162 -~~~d~vi~~ 170 (265)
.++|++|++
T Consensus 82 ~g~iD~lv~n 91 (267)
T TIGR02685 82 FGRCDVLVNN 91 (267)
T ss_pred cCCceEEEEC
Confidence 358999977
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=5.9e-09 Score=92.65 Aligned_cols=140 Identities=8% Similarity=0.023 Sum_probs=88.4
Q ss_pred CCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCC---cchhhhcC--CccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDK---RNAMESFG--TYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~---~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+ ++||++++++|+++|++|++..|+. ++.+++.. .....+++|++|++++.++++ .
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 45789999997 8999999999999999999888763 22222211 235578999999998887653 4
Q ss_pred CCEEEEcCc---------h--------H-------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhH-
Q 024643 164 VRSIICPSE---------G--------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 164 ~d~vi~~~~---------~--------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
+|++|++.+ . + +...+.. .+-.++|++||.+...+.+....|..++.
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaa 168 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAA 168 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHH
Confidence 788887621 0 0 0000110 12268999998766543322222222221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|.||++.
T Consensus 169 l~~l~~~la~el~~~gIrVn~v~PG~v~ 196 (272)
T PRK08159 169 LEASVKYLAVDLGPKNIRVNAISAGPIK 196 (272)
T ss_pred HHHHHHHHHHHhcccCeEEEEeecCCcC
Confidence 112223333345579999999999874
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.00 E-value=5e-09 Score=104.34 Aligned_cols=123 Identities=11% Similarity=0.083 Sum_probs=83.8
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE 172 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~ 172 (265)
...+.|+||||||+||||++|++.|.++|++|.. ..+|++|.+.+.+.++ +.|+|||+..
T Consensus 376 ~~~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------~~~~l~d~~~v~~~i~~~~pd~Vih~Aa 437 (668)
T PLN02260 376 PGKPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------GKGRLEDRSSLLADIRNVKPTHVFNAAG 437 (668)
T ss_pred CCCCCceEEEECCCchHHHHHHHHHHhCCCeEEe------------------eccccccHHHHHHHHHhhCCCEEEECCc
Confidence 3456789999999999999999999999998731 1246788888888876 6899998721
Q ss_pred ------h-------------------HHHHHHHhCCCCEEEEecccccccCC--------CCc---ccc-cchhHH-HHH
Q 024643 173 ------G-------------------FISNAGSLKGVQHVILLSQLSVYRGS--------GGI---QAL-MKGNAR-KLA 214 (265)
Q Consensus 173 ------~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~--------~~~---~~~-~~~~~~-~~k 214 (265)
. .+.++|++.|++ +|++||..+|... .+. .+. .+...| ..|
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK 516 (668)
T PLN02260 438 VTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGLL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTK 516 (668)
T ss_pred ccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCCe-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHH
Confidence 0 034457778885 5677777665321 011 111 111334 589
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+|++++.. -++.++|+.++.
T Consensus 517 ~~~E~~~~~~-~~~~~~r~~~~~ 538 (668)
T PLN02260 517 AMVEELLREY-DNVCTLRVRMPI 538 (668)
T ss_pred HHHHHHHHhh-hhheEEEEEEec
Confidence 9999998775 356777777654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-08 Score=85.27 Aligned_cols=134 Identities=24% Similarity=0.256 Sum_probs=88.2
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-ch------hhh--cCCccEEeeeCCCCHHHHHHHHcC-------
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-NA------MES--FGTYVESMAGDASNKKFLKTALRG------- 163 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-~~------~~~--~~~~v~~i~~D~~d~~~l~~~~~~------- 163 (265)
+++||||+|+||..+++.|+.++ .+|+++.|+.. .. .++ .+..++++.+|++|++++.++++.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 68999999999999999999998 58999999831 11 111 356789999999999999998854
Q ss_pred CCEEEEcCch-------------H-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 164 VRSIICPSEG-------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
++.|||+... + +.++......+.||+.||....-...+...|...+.+.. ..
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~ld--a~ 159 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLD--AL 159 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHH--HH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHH--HH
Confidence 4678876210 0 222344567889999999887655544434433333222 22
Q ss_pred HHHHHhCCCCEEEEeCCCc
Q 024643 218 ESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l 236 (265)
....+..|.+++.|.-|..
T Consensus 160 a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 160 ARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHTTSEEEEEEE-EB
T ss_pred HHHHHhCCCCEEEEEcccc
Confidence 3344567999999988754
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.2e-09 Score=84.81 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=74.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeC--Ccchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD--KRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~--~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
|+++||||+++||++++++|+++| ..|+++.|+ .+....+ .+.++.++++|++++++++++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999999999995 588888888 3332222 24678999999999988887663 5
Q ss_pred CCEEEEcCch-------------H-------------HHHHHHhCCCCEEEEecccccccCCCC
Q 024643 164 VRSIICPSEG-------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGG 201 (265)
Q Consensus 164 ~d~vi~~~~~-------------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~ 201 (265)
+|++|++.+. + +..++...+-++||++||.....+.+.
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 144 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPG 144 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTT
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCC
Confidence 7899976110 0 111122245679999999888765543
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.4e-09 Score=91.69 Aligned_cols=140 Identities=14% Similarity=0.094 Sum_probs=86.4
Q ss_pred CCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeC---Ccchhhhc--CCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD---KRNAMESF--GTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~---~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++|||| +++||++++++|+++|++|++..|. .++.+++. ......+.+|++|++++.++++ .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999996 6799999999999999999987653 23332221 1223468899999999887663 5
Q ss_pred CCEEEEcCc---------hHHH----------------------HH-HHh-CCCCEEEEecccccccCCCCcccccchhH
Q 024643 164 VRSIICPSE---------GFIS----------------------NA-GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 164 ~d~vi~~~~---------~~~~----------------------~a-a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
+|++|++.+ .++. .+ +.. .+-++||++||.....+.+....|...+.
T Consensus 85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKa 164 (260)
T PRK06997 85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKA 164 (260)
T ss_pred CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHH
Confidence 788887611 1100 00 100 12368999999876443322222222211
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 --RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 --~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|.||++.
T Consensus 165 al~~l~~~la~el~~~gIrVn~i~PG~v~ 193 (260)
T PRK06997 165 SLEASVRYLAVSLGPKGIRANGISAGPIK 193 (260)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence 111122233344578999999999874
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-08 Score=89.29 Aligned_cols=74 Identities=16% Similarity=0.122 Sum_probs=58.3
Q ss_pred CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeCC--cchhhh---cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDK--RNAMES---FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~~--~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++|||| +++||.+++++|+++|++|++.+|+. +..+++ .+..+.++++|++|++++.++++
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 34679999999 89999999999999999999998764 222222 23357789999999998876653
Q ss_pred CCCEEEEc
Q 024643 163 GVRSIICP 170 (265)
Q Consensus 163 ~~d~vi~~ 170 (265)
.+|++|++
T Consensus 85 ~iD~li~n 92 (256)
T PRK07889 85 GLDGVVHS 92 (256)
T ss_pred CCcEEEEc
Confidence 58888876
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.7e-08 Score=87.80 Aligned_cols=142 Identities=16% Similarity=0.168 Sum_probs=95.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---------CCccEEeeeCCCCHHHHHHHH-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---------GTYVESMAGDASNKKFLKTAL----- 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---------~~~v~~i~~D~~d~~~l~~~~----- 161 (265)
...++.++|||++.+||++++++|++.|++|++.+|+.++.++.. +..+..+.+|+++.+.+.+++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987644321 235788999999887655443
Q ss_pred ---cCCCEEEEcCc------hH----------------------H----HHHHHhCCCCEEEEecccccccCCCCc-ccc
Q 024643 162 ---RGVRSIICPSE------GF----------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGI-QAL 205 (265)
Q Consensus 162 ---~~~d~vi~~~~------~~----------------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~-~~~ 205 (265)
...|+++++.+ .. + ...+++.+-..|+++||.......... ..|
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y 164 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAY 164 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccc
Confidence 35888887611 00 0 011344566789999998776443222 122
Q ss_pred cchh--HHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 206 MKGN--ARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~--~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+ .....+.+...+..+|++++.|-||.+.
T Consensus 165 ~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~ 198 (270)
T KOG0725|consen 165 GVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVK 198 (270)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEe
Confidence 2111 1122333444456689999999999754
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=5.7e-09 Score=87.35 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=73.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
|+++||||||++|. +++.|+++|++|++++|+.++...+. ...+..+.+|+.|++++.++++ ..|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 67999999987765 99999999999999999876654431 2457888999999999887764 35666
Q ss_pred EEc----CchHHHHHHHhCCCC----EEEEeccccc
Q 024643 168 ICP----SEGFISNAGSLKGVQ----HVILLSQLSV 195 (265)
Q Consensus 168 i~~----~~~~~~~aa~~~gv~----r~V~iSS~~v 195 (265)
|.. .+..+..+|++.|++ +|+++=...+
T Consensus 80 v~~vh~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~ 115 (177)
T PRK08309 80 VAWIHSSAKDALSVVCRELDGSSETYRLFHVLGSAA 115 (177)
T ss_pred EEeccccchhhHHHHHHHHccCCCCceEEEEeCCcC
Confidence 643 445677889999999 8988764433
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.94 E-value=4e-08 Score=92.28 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++..... ...+..+.+|++|.+++.+.+.++|++|++
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInn 252 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIIN 252 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEEC
Confidence 345789999999999999999999999999999999876543221 224678899999999999999999999976
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.93 E-value=2.9e-08 Score=88.63 Aligned_cols=138 Identities=19% Similarity=0.247 Sum_probs=97.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--------CccEEeeeCCCCHHHHHHHHcC-------
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--------TYVESMAGDASNKKFLKTALRG------- 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--------~~v~~i~~D~~d~~~l~~~~~~------- 163 (265)
..+|+|||++.++|..++..+..+|++|+++.|+.++..+... ..+.+..+|+.|.+++...+++
T Consensus 33 ~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 33 RRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred cceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 3789999999999999999999999999999999988665421 1256888999999999887764
Q ss_pred CCEEEEcCc----hH--------------------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhH--
Q 024643 164 VRSIICPSE----GF--------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 164 ~d~vi~~~~----~~--------------------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
.|.+|++.+ ++ ...++++.. ..+|+++||..+..+-.+..+|.+.+.
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 477887622 11 011133332 459999999876554444445544432
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 211 RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 ~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
........+++...++.++..-|+-+
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~ 218 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDT 218 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCC
Confidence 12334445566678999999999865
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.89 E-value=1.8e-09 Score=92.40 Aligned_cols=137 Identities=18% Similarity=0.176 Sum_probs=100.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (265)
--+.++.|+.|+.|.++++.....++.|..+.|+..+. .+.....+.++.+|.....-.+..+.+...++-+..
T Consensus 52 ~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggfgn~ 131 (283)
T KOG4288|consen 52 VEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGFGNI 131 (283)
T ss_pred HHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhhCCCcccchhhccccccCcchhhhcCCcccHHHhcCccch
Confidence 45789999999999999999999999999999987542 223456788899988655555566666666664311
Q ss_pred --------hH---HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHh-CCCCEEEEeCCCccCCC
Q 024643 173 --------GF---ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA-SGIPYTIIRTGVLQNTP 240 (265)
Q Consensus 173 --------~~---~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~-~gl~~tivRPg~l~~~~ 240 (265)
.. -..+++++|+++|+|+|..... ..++.+..++..|+++|.++.. ++++-+++|||++.+..
T Consensus 132 ~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d~~-----~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~R 206 (283)
T KOG4288|consen 132 ILMDRINGTANINAVKAAAKAGVPRFVYISAHDFG-----LPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGTR 206 (283)
T ss_pred HHHHHhccHhhHHHHHHHHHcCCceEEEEEhhhcC-----CCCccchhhhccchHHHHHHHHhcCCCceeeccceeeccc
Confidence 11 2234678999999999975431 2234445667789999988754 78999999999987653
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.87 E-value=8.2e-08 Score=81.16 Aligned_cols=142 Identities=9% Similarity=0.106 Sum_probs=97.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
.+.+||||||+.+||..|++++.+.|-+|++..|+++++.+.. .+.+....+|+.|.++.++.++ ..+++|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4679999999999999999999999999999999998876653 3567888999999988776553 467777
Q ss_pred EcCc-----------hHHH-----------------HH----HHhCCCCEEEEecccccccCCCCcccccchh--HHHHH
Q 024643 169 CPSE-----------GFIS-----------------NA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGN--ARKLA 214 (265)
Q Consensus 169 ~~~~-----------~~~~-----------------~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~--~~~~k 214 (265)
.+.+ ..+. .+ ..+..-..||.+||.-++-+.....-|...+ .+...
T Consensus 84 NNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt 163 (245)
T COG3967 84 NNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYT 163 (245)
T ss_pred ecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHH
Confidence 5511 0000 00 2234456899999987765443222222222 22233
Q ss_pred HHHHHHHHhCCCCEEEEeCCCccCC
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQNT 239 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~~~ 239 (265)
......++..++++.=+-|..+...
T Consensus 164 ~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 164 LALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHhhhcceEEEEecCCceecC
Confidence 4455556777899888888877543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.5e-08 Score=83.67 Aligned_cols=136 Identities=16% Similarity=0.218 Sum_probs=88.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhhcC----CccEEeeeCCCC-HHHHHHHHc----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESFG----TYVESMAGDASN-KKFLKTALR---- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~~~----~~v~~i~~D~~d-~~~l~~~~~---- 162 (265)
..+++++||||+++||+++++.|+++|++|+++.|+... ...... ..+....+|+++ .+++..+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999988887543 111222 357778899998 877765542
Q ss_pred ---CCCEEEEcCc------hH---------------------HHHH----HHhCCCCEEEEecccccccCCCCc-ccccc
Q 024643 163 ---GVRSIICPSE------GF---------------------ISNA----GSLKGVQHVILLSQLSVYRGSGGI-QALMK 207 (265)
Q Consensus 163 ---~~d~vi~~~~------~~---------------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~-~~~~~ 207 (265)
.+|+++++.+ .+ ...+ ++ .. +||++||.... ..... ..|..
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~--~Iv~isS~~~~-~~~~~~~~Y~~ 158 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK-KQ--RIVNISSVAGL-GGPPGQAAYAA 158 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh-hC--eEEEECCchhc-CCCCCcchHHH
Confidence 4887776511 11 0000 22 11 99999999876 44332 23332
Q ss_pred hhH--HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 208 GNA--RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 208 ~~~--~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
++. ..........+...|+.++.|.||++
T Consensus 159 sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 159 SKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 222 11222223445567899999999965
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.7e-08 Score=84.58 Aligned_cols=142 Identities=17% Similarity=0.199 Sum_probs=96.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cC--CccEEeeeCCCCHHHHHHHHc-------C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
+.+.+.++||||+.+||+++++.|++.|++|.+.+++...+++. .+ ..-..+.+|++++++++..++ .
T Consensus 11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ 90 (256)
T KOG1200|consen 11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGT 90 (256)
T ss_pred HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCC
Confidence 44567899999999999999999999999999999988765543 22 245678999999988876554 3
Q ss_pred CCEEEEcC----chH----------------------HHHH------HHhCCCCEEEEecccccccCCCCcccccch--h
Q 024643 164 VRSIICPS----EGF----------------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKG--N 209 (265)
Q Consensus 164 ~d~vi~~~----~~~----------------------~~~a------a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~--~ 209 (265)
.++++.|. +.+ ..++ +...+--+||.+||.-....+.+...|... .
T Consensus 91 psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G 170 (256)
T KOG1200|consen 91 PSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG 170 (256)
T ss_pred CcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCc
Confidence 56777651 111 1111 112233499999998665444333222221 1
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.....+.+.+++...+++++.|-||++.
T Consensus 171 vIgftktaArEla~knIrvN~VlPGFI~ 198 (256)
T KOG1200|consen 171 VIGFTKTAARELARKNIRVNVVLPGFIA 198 (256)
T ss_pred eeeeeHHHHHHHhhcCceEeEecccccc
Confidence 2233455677788899999999999874
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.85 E-value=6.4e-08 Score=82.83 Aligned_cols=63 Identities=17% Similarity=0.249 Sum_probs=49.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeE-EEEEeCCcchh-hh-----cCCccEEeeeCCCCHHHHHHHHc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRI-KALVKDKRNAM-ES-----FGTYVESMAGDASNKKFLKTALR 162 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V-~~~~R~~~~~~-~~-----~~~~v~~i~~D~~d~~~l~~~~~ 162 (265)
+.|+||||+.+||..|+++|++. |.++ ++..|+++++. ++ ..+++++++.|+++.+++.++.+
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~ 74 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQ 74 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHH
Confidence 45999999999999999999985 4544 55667787732 22 25789999999999988887664
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=98.82 E-value=9.7e-08 Score=86.51 Aligned_cols=38 Identities=11% Similarity=0.013 Sum_probs=33.4
Q ss_pred CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 97 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
..+++++|||| +.+||.++++.|++.|++|++ .|+..+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~ 46 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPA 46 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcch
Confidence 56899999999 899999999999999999988 665443
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.82 E-value=4e-08 Score=86.60 Aligned_cols=137 Identities=19% Similarity=0.225 Sum_probs=95.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEe-----CCcchhhh-cCCccEEeeeCCCCHHHHHHHHc--CCCEEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVK-----DKRNAMES-FGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R-----~~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~ 169 (265)
++++||||.||||+..+..+...- ++.+.++. +...+++. ..++.+++++|+.|...+...+. .+|.|++
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 789999999999999999999874 55555543 22222222 34678999999999988887774 5777776
Q ss_pred cCc----------h------------HHHHHHHhC-CCCEEEEecccccccCCCCc------ccccchhH-HHHHHHHHH
Q 024643 170 PSE----------G------------FISNAGSLK-GVQHVILLSQLSVYRGSGGI------QALMKGNA-RKLAEQDES 219 (265)
Q Consensus 170 ~~~----------~------------~~~~aa~~~-gv~r~V~iSS~~v~~~~~~~------~~~~~~~~-~~~k~~~E~ 219 (265)
... . .+..+++.. ++++||++||..+|+..... ...-|.+. .+.|.++|+
T Consensus 87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~ 166 (331)
T KOG0747|consen 87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEM 166 (331)
T ss_pred hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHHH
Confidence 411 1 133334444 78999999999999764221 11112222 348888898
Q ss_pred HHHh----CCCCEEEEeCCCc
Q 024643 220 MLMA----SGIPYTIIRTGVL 236 (265)
Q Consensus 220 ~l~~----~gl~~tivRPg~l 236 (265)
.++. .+++++++|-+.+
T Consensus 167 ~v~Sy~~sy~lpvv~~R~nnV 187 (331)
T KOG0747|consen 167 LVRSYGRSYGLPVVTTRMNNV 187 (331)
T ss_pred HHHHHhhccCCcEEEEeccCc
Confidence 8865 7899999999975
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-07 Score=81.77 Aligned_cols=140 Identities=16% Similarity=0.141 Sum_probs=95.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..++.+++||+.|+||..+.++|+++|..+.++.-+.+..+.. ....+.++++|+++..+++++++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999888887766554322 23468899999999988887764
Q ss_pred CCCEEEEcC----ch------------H------HHHHHH-hC-C-CCEEEEecccccccCCCCcccccchhH----HHH
Q 024643 163 GVRSIICPS----EG------------F------ISNAGS-LK-G-VQHVILLSQLSVYRGSGGIQALMKGNA----RKL 213 (265)
Q Consensus 163 ~~d~vi~~~----~~------------~------~~~aa~-~~-g-v~r~V~iSS~~v~~~~~~~~~~~~~~~----~~~ 213 (265)
.+|++|... +. . ..+.+. +. | -+-||.+||.....+.+...-|..++. +..
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTR 162 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTR 162 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeeh
Confidence 467777541 11 0 112232 22 2 247899999887665433322322221 112
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l 236 (265)
..+-+.+.+.+|++...+.||+.
T Consensus 163 Sla~~ayy~~sGV~~~avCPG~t 185 (261)
T KOG4169|consen 163 SLADLAYYQRSGVRFNAVCPGFT 185 (261)
T ss_pred hhhhhhhHhhcCEEEEEECCCcc
Confidence 23446778899999999999974
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-07 Score=80.27 Aligned_cols=135 Identities=10% Similarity=-0.013 Sum_probs=91.3
Q ss_pred CCCEEEEEcC-CcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcC--------CCEE
Q 024643 98 ARDAVLVTDG-DSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRG--------VRSI 167 (265)
Q Consensus 98 ~~~~vlVtGa-tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~--------~d~v 167 (265)
..++|+|||+ +|+||.+|++.+.+.|+.|.+..|+.+....+. ..++....+|+++++++.+.... .|.+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3478888886 589999999999999999999999988766654 56789999999999998876542 4555
Q ss_pred EEcC------ch------HHHH-----------HHH------hCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 168 ICPS------EG------FISN-----------AGS------LKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 168 i~~~------~~------~~~~-----------aa~------~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
+... +. .+.+ .++ -..-+.||++.|..++-+.+....| -++|.++.
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iY-----sAsKAAih 160 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIY-----SASKAAIH 160 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhh-----hHHHHHHH
Confidence 5431 10 0000 011 0122489999999887654321111 12454444
Q ss_pred HHH-------HhCCCCEEEEeCCCcc
Q 024643 219 SML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l-------~~~gl~~tivRPg~l~ 237 (265)
++. +..|++++-+-+|.+.
T Consensus 161 ay~~tLrlEl~PFgv~Vin~itGGv~ 186 (289)
T KOG1209|consen 161 AYARTLRLELKPFGVRVINAITGGVA 186 (289)
T ss_pred HhhhhcEEeeeccccEEEEeccccee
Confidence 443 3478999999999864
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.9e-07 Score=86.74 Aligned_cols=86 Identities=21% Similarity=0.256 Sum_probs=72.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~ 174 (265)
+|+|+|.|| |+||+.++..|+++| .+|++.+|+.++..+.. ..+++.++.|+.|.+++.+++++.|+||++.+.+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~ 79 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF 79 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence 578999999 999999999999999 99999999987766553 3479999999999999999999999999884433
Q ss_pred ----HHHHHHhCCCC
Q 024643 175 ----ISNAGSLKGVQ 185 (265)
Q Consensus 175 ----~~~aa~~~gv~ 185 (265)
+.++|.++|+.
T Consensus 80 ~~~~i~ka~i~~gv~ 94 (389)
T COG1748 80 VDLTILKACIKTGVD 94 (389)
T ss_pred hhHHHHHHHHHhCCC
Confidence 45566677763
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.62 E-value=4.7e-07 Score=78.58 Aligned_cols=130 Identities=15% Similarity=0.155 Sum_probs=85.1
Q ss_pred cCC--cHHHHHHHHHHHHCCCeEEEEEeCCcch----hhhc-CCccEEeeeCCCCHHHHHHHH--------cCCCEEEEc
Q 024643 106 DGD--SDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (265)
Q Consensus 106 Gat--G~IG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~-~~~v~~i~~D~~d~~~l~~~~--------~~~d~vi~~ 170 (265)
|++ ++||+.++++|+++|++|++.+|+.++. +++. ..+.+++.+|++|++++.+++ ..+|++|++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 9999999999999999999999998763 2221 123557999999998887653 467988865
Q ss_pred ----Cc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHH
Q 024643 171 ----SE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 214 (265)
Q Consensus 171 ----~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k 214 (265)
.. .+ ....+++. .++|++||.......+....|...+. ....
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~l~ 158 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEGLT 158 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence 11 10 00112233 68999999876554333222222111 1122
Q ss_pred HHHHHHHHh-CCCCEEEEeCCCcc
Q 024643 215 EQDESMLMA-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~-~gl~~tivRPg~l~ 237 (265)
+.+...+.. .|++++.|.||++.
T Consensus 159 r~lA~el~~~~gIrVN~V~pG~i~ 182 (241)
T PF13561_consen 159 RSLAKELAPKKGIRVNAVSPGPIE 182 (241)
T ss_dssp HHHHHHHGGHGTEEEEEEEESSBS
T ss_pred HHHHHHhccccCeeeeeeccccee
Confidence 333344556 89999999999874
|
... |
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=98.60 E-value=1e-06 Score=98.16 Aligned_cols=141 Identities=15% Similarity=0.140 Sum_probs=90.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCc-----------------------------c----------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR-----------------------------N---------- 135 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~-----------------------------~---------- 135 (265)
...+++++||||+++||.+++++|+++ |++|++++|+.. +
T Consensus 1994 l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~ 2073 (2582)
T TIGR02813 1994 LNSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALV 2073 (2582)
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcc
Confidence 345789999999999999999999998 699999999820 0
Q ss_pred ------------hhh--hcCCccEEeeeCCCCHHHHHHHHc------CCCEEEEcCch-------------H--------
Q 024643 136 ------------AME--SFGTYVESMAGDASNKKFLKTALR------GVRSIICPSEG-------------F-------- 174 (265)
Q Consensus 136 ------------~~~--~~~~~v~~i~~D~~d~~~l~~~~~------~~d~vi~~~~~-------------~-------- 174 (265)
... ..+..+.++.+|++|.+++.++++ .+|.+||+.+. +
T Consensus 2074 ~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813 2074 RPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred cccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHH
Confidence 000 023457889999999998887664 47999986210 0
Q ss_pred -----HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 175 -----ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 175 -----~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
+..++.....++||++||........+...|...+..-.+..........+++++.|.||.+
T Consensus 2154 ~G~~~Ll~al~~~~~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~w 2220 (2582)
T TIGR02813 2154 DGLLSLLAALNAENIKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPW 2220 (2582)
T ss_pred HHHHHHHHHHHHhCCCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCee
Confidence 12223344567899999987765443332332222211111111111124688999999975
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=5.7e-07 Score=74.31 Aligned_cols=143 Identities=17% Similarity=0.167 Sum_probs=93.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcC---CCEEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRG---VRSIIC 169 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~---~d~vi~ 169 (265)
...++.|++||+.-+||++++++|.+.|.+|+++.|++..+..+. +..+..+.+|+.+.+.+.+.+.. +|.++.
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVN 83 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVN 83 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhc
Confidence 346789999999999999999999999999999999998766552 33488999999998888887743 233332
Q ss_pred cCc-----hH---------------------HHHH-----HHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHH
Q 024643 170 PSE-----GF---------------------ISNA-----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQ 216 (265)
Q Consensus 170 ~~~-----~~---------------------~~~a-----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~ 216 (265)
..+ .| +.+. ..+.--+.||.+||.+...+......|...+.. ...+.
T Consensus 84 NAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~ 163 (245)
T KOG1207|consen 84 NAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKC 163 (245)
T ss_pred cchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHH
Confidence 200 00 1111 111222469999998876655444344433321 11222
Q ss_pred HHHHHHhCCCCEEEEeCCCccC
Q 024643 217 DESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~~ 238 (265)
+..++-...+++..+.|..++.
T Consensus 164 lAlELGp~kIRVNsVNPTVVmT 185 (245)
T KOG1207|consen 164 LALELGPQKIRVNSVNPTVVMT 185 (245)
T ss_pred HHHhhCcceeEeeccCCeEEEe
Confidence 3333444678899999987543
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.59 E-value=6.5e-07 Score=84.72 Aligned_cols=140 Identities=19% Similarity=0.239 Sum_probs=91.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcch------hhh---------------cCCccEEeeeCCCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNA------MES---------------FGTYVESMAGDASN 153 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~------~~~---------------~~~~v~~i~~D~~d 153 (265)
.+++|+|||||||+|+-+++.|+..- -++.++.|....- ... .-..+..+.||+.+
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 46899999999999999999999864 4778888865321 111 01357788899865
Q ss_pred H------HHHHHHHcCCCEEEEcCc--hH-----------------HHHHHHh-CCCCEEEEecccccccCC--------
Q 024643 154 K------KFLKTALRGVRSIICPSE--GF-----------------ISNAGSL-KGVQHVILLSQLSVYRGS-------- 199 (265)
Q Consensus 154 ~------~~l~~~~~~~d~vi~~~~--~~-----------------~~~aa~~-~gv~r~V~iSS~~v~~~~-------- 199 (265)
+ ..+....+++++|||++. .| +.+.|++ ...+-++++|++.+....
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y 170 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY 170 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence 4 445567789999998721 11 2233443 456789999998774110
Q ss_pred ---C--Cccc-------------------c---cchhHHHHHHHHHHHHHh--CCCCEEEEeCCCcc
Q 024643 200 ---G--GIQA-------------------L---MKGNARKLAEQDESMLMA--SGIPYTIIRTGVLQ 237 (265)
Q Consensus 200 ---~--~~~~-------------------~---~~~~~~~~k~~~E~~l~~--~gl~~tivRPg~l~ 237 (265)
. .... + .+..+.-.|..+|+.+.+ .++|.+|+||+.+.
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~ 237 (467)
T KOG1221|consen 171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIIT 237 (467)
T ss_pred CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCcee
Confidence 0 0000 0 000111267788888866 68999999999753
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.4e-06 Score=72.29 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------c
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
...+++++||||+++||..+++.|+++|++|++++|+.+..... .+..+.++.+|++|.+++.+++ .
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS 92 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34678999999999999999999999999999999986543221 1345677899999998887654 2
Q ss_pred CCCEEEEc
Q 024643 163 GVRSIICP 170 (265)
Q Consensus 163 ~~d~vi~~ 170 (265)
.+|.+|++
T Consensus 93 ~iDilVnn 100 (169)
T PRK06720 93 RIDMLFQN 100 (169)
T ss_pred CCCEEEEC
Confidence 47777765
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.44 E-value=8.9e-07 Score=74.82 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=61.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+++++|+||+|++|+.+++.|++.|++|++++|+.++++.+. ..+......|..|.+.+.++++++|.||.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~a 104 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAA 104 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEEC
Confidence 4689999999999999999999999999999999987655431 123556677889999999999999999987
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=1.3e-05 Score=72.41 Aligned_cols=37 Identities=8% Similarity=-0.056 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 96 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
...+++++||||+ .+||+++++.|+++|++|++.++.
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 3457899999995 899999999999999999997643
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.35 E-value=2.4e-06 Score=79.65 Aligned_cols=87 Identities=22% Similarity=0.297 Sum_probs=66.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHCC-C-eEEEEEeCCcchhhh----cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-
Q 024643 102 VLVTDGDSDIGQMVILSLIVKR-T-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G-~-~V~~~~R~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~- 174 (265)
|+|.|| |++|+.+++.|++++ + +|++.+|+.++++.+ ....++++++|+.|.+++.++++++|+||++.+.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~ 79 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFF 79 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccch
Confidence 789999 999999999999987 4 899999999887665 35689999999999999999999999999884432
Q ss_pred ---HHHHHHhCCCCEEEEe
Q 024643 175 ---ISNAGSLKGVQHVILL 190 (265)
Q Consensus 175 ---~~~aa~~~gv~r~V~i 190 (265)
+..+|.+.|+ ++|-.
T Consensus 80 ~~~v~~~~i~~g~-~yvD~ 97 (386)
T PF03435_consen 80 GEPVARACIEAGV-HYVDT 97 (386)
T ss_dssp HHHHHHHHHHHT--EEEES
T ss_pred hHHHHHHHHHhCC-Ceecc
Confidence 4555666665 45543
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.4e-06 Score=73.28 Aligned_cols=90 Identities=16% Similarity=0.230 Sum_probs=72.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch-H-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTA-LRGVRSIICPSEG-F- 174 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~-~- 174 (265)
|+++|.|+ |.+|+.+++.|.+.||+|+++.+++++..+... .....+.+|-+|++.|.++ +.++|+++.+++. .
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~~ 79 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDEV 79 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCHH
Confidence 68899999 999999999999999999999999998776444 5688999999999999998 7899999977322 1
Q ss_pred ---HHHH-HHhCCCCEEEEe
Q 024643 175 ---ISNA-GSLKGVQHVILL 190 (265)
Q Consensus 175 ---~~~a-a~~~gv~r~V~i 190 (265)
+... ++..|++++|--
T Consensus 80 N~i~~~la~~~~gv~~viar 99 (225)
T COG0569 80 NSVLALLALKEFGVPRVIAR 99 (225)
T ss_pred HHHHHHHHHHhcCCCcEEEE
Confidence 2222 344678776643
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.8e-06 Score=73.22 Aligned_cols=99 Identities=15% Similarity=0.115 Sum_probs=72.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh----hh------cCCccEEeeeCCCCHHHHHHHHcCC--CE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ES------FGTYVESMAGDASNKKFLKTALRGV--RS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~------~~~~v~~i~~D~~d~~~l~~~~~~~--d~ 166 (265)
+++.||||-||+-|..|++.|+++||.|..+.|..+... .+ ....+..+.+|++|...+.++++.+ |-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 578999999999999999999999999999998743211 11 2335889999999999999998754 55
Q ss_pred EEEcC-ch---------------------HHHHHHHhCCC--CEEEEeccccccc
Q 024643 167 IICPS-EG---------------------FISNAGSLKGV--QHVILLSQLSVYR 197 (265)
Q Consensus 167 vi~~~-~~---------------------~~~~aa~~~gv--~r~V~iSS~~v~~ 197 (265)
|++.. .. -+.++++.-+. .||...||.--|+
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG 136 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYG 136 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhc
Confidence 55431 00 14556666554 4888888876664
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.32 E-value=6e-06 Score=73.05 Aligned_cols=85 Identities=15% Similarity=0.156 Sum_probs=63.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCchH---
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF--- 174 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~~~--- 174 (265)
|+|+|+||||. |+.+++.|.++|++|++..++......+...+...+..+..|.+++.+.++ ++|.||.++..+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~ 79 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ 79 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence 68999999999 999999999999999999999876554443334455566778888988885 489999874333
Q ss_pred ----HHHHHHhCCCC
Q 024643 175 ----ISNAGSLKGVQ 185 (265)
Q Consensus 175 ----~~~aa~~~gv~ 185 (265)
...+|++.|+.
T Consensus 80 is~~a~~a~~~~~ip 94 (256)
T TIGR00715 80 ITTNATAVCKELGIP 94 (256)
T ss_pred HHHHHHHHHHHhCCc
Confidence 33345555554
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=9.5e-06 Score=70.52 Aligned_cols=78 Identities=8% Similarity=0.029 Sum_probs=55.6
Q ss_pred HHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc----CCCEEEEcCc-----hH-----------
Q 024643 115 VILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSE-----GF----------- 174 (265)
Q Consensus 115 l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~----~~d~vi~~~~-----~~----------- 174 (265)
++++|+++|++|++++|+.++.. ..+++++|++|.+++.++++ ++|++|++.+ .+
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~vN~~~~ 75 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT-----LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARVNFLGL 75 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh-----hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhhchHHH
Confidence 47889999999999999876542 24568899999999988876 4899998721 11
Q ss_pred --HHHHHHh--CCCCEEEEeccccccc
Q 024643 175 --ISNAGSL--KGVQHVILLSQLSVYR 197 (265)
Q Consensus 175 --~~~aa~~--~gv~r~V~iSS~~v~~ 197 (265)
+..++.. ..-++||++||...+.
T Consensus 76 ~~l~~~~~~~~~~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 76 RHLTEALLPRMAPGGAIVNVASLAGAE 102 (241)
T ss_pred HHHHHHHHHhccCCcEEEEeCcHHhhc
Confidence 1111211 1226999999998764
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.1e-05 Score=68.68 Aligned_cols=73 Identities=18% Similarity=0.160 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-----CeEEEEEeCCcchhhh-------cC---CccEEeeeCCCCHHHHHHHH-
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMES-------FG---TYVESMAGDASNKKFLKTAL- 161 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-----~~V~~~~R~~~~~~~~-------~~---~~v~~i~~D~~d~~~l~~~~- 161 (265)
.++.++|||++.++|..++.+|++.. .++.+.+|+.+++++. .+ .+++++..|+++..++.++.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 46789999999999999999999875 3577889999887654 22 36889999999988776554
Q ss_pred ------cCCCEEEEc
Q 024643 162 ------RGVRSIICP 170 (265)
Q Consensus 162 ------~~~d~vi~~ 170 (265)
+..|.+++.
T Consensus 82 di~~rf~~ld~iylN 96 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLN 96 (341)
T ss_pred HHHHHhhhccEEEEc
Confidence 567888865
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.8e-05 Score=72.24 Aligned_cols=100 Identities=14% Similarity=0.098 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchh--hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~--~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
...+++|+|+|++|.||..++..|+.++ .++++++++....+ ++.+........+.+|+.++.++++++|+||++.
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence 3457799999999999999999998666 68999998432221 1111111334456667666678899999999871
Q ss_pred -----ch-----H----------HHHHHHhCCCCEEEEeccccc
Q 024643 172 -----EG-----F----------ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 172 -----~~-----~----------~~~aa~~~gv~r~V~iSS~~v 195 (265)
++ . +..++++.+++++|+++|..+
T Consensus 85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPv 128 (321)
T PTZ00325 85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128 (321)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcH
Confidence 11 1 333477889999999999766
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=98.03 E-value=5.1e-05 Score=58.32 Aligned_cols=69 Identities=19% Similarity=0.244 Sum_probs=58.4
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
|+|.|. |.+|+.+++.|.+.+.+|++++++++..+.+...++.++.+|.+|++.+.++ ++.++.++.++
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEES
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEcc
Confidence 678888 7899999999999778999999999888777667799999999999999875 57889888773
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=98.00 E-value=3.4e-05 Score=73.19 Aligned_cols=70 Identities=13% Similarity=0.212 Sum_probs=62.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHH-HcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~ 170 (265)
|+|+|+|+ |.+|+.+++.|.++|++|+++++++++.+.+.. .+++++.+|.++.+.+.++ ++++|.++.+
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~ 72 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAV 72 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEe
Confidence 68999998 999999999999999999999999887766543 5689999999999999888 8899999977
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.5e-05 Score=65.15 Aligned_cols=124 Identities=14% Similarity=0.185 Sum_probs=79.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEc---C
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICP---S 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~---~ 171 (265)
+++|+|||++|.+|+++.+.+..+|. +=.++.-+ -.+|+++.++.+.+|+. ...||+. .
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------kd~DLt~~a~t~~lF~~ekPthVIhlAAmV 66 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------KDADLTNLADTRALFESEKPTHVIHLAAMV 66 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------ccccccchHHHHHHHhccCCceeeehHhhh
Confidence 47899999999999999999999885 21221111 13789999999998864 4456654 1
Q ss_pred chH--------------------HHHHHHhCCCCEEEEecccccccCCCC--c-------ccccchh-HHH-HHHH----
Q 024643 172 EGF--------------------ISNAGSLKGVQHVILLSQLSVYRGSGG--I-------QALMKGN-ARK-LAEQ---- 216 (265)
Q Consensus 172 ~~~--------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~--~-------~~~~~~~-~~~-~k~~---- 216 (265)
+++ +...|-+.|++++|++.|..++....+ . .+.-+++ .|. .|+.
T Consensus 67 GGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~ 146 (315)
T KOG1431|consen 67 GGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQ 146 (315)
T ss_pred cchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHH
Confidence 221 233367899999999999988754311 1 0111111 121 3322
Q ss_pred HHHHHHhCCCCEEEEeCCCc
Q 024643 217 DESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l 236 (265)
...+-.++|..+|.+-|..+
T Consensus 147 n~aY~~qhg~~~tsviPtNv 166 (315)
T KOG1431|consen 147 NQAYRQQHGRDYTSVIPTNV 166 (315)
T ss_pred HHHHHHHhCCceeeeccccc
Confidence 23455668999999988864
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.97 E-value=2.1e-05 Score=71.63 Aligned_cols=70 Identities=13% Similarity=0.210 Sum_probs=60.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHH----CCCeEEEEEeCCcchhhhc-----------CCccEEeeeCCCCHHHHHHHHcCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRNAMESF-----------GTYVESMAGDASNKKFLKTALRGV 164 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~----~G~~V~~~~R~~~~~~~~~-----------~~~v~~i~~D~~d~~~l~~~~~~~ 164 (265)
--++|.|||||.|..++++++. .|..+-+..|+++++.+.. ...+ ++.+|.+|++++.+..+.+
T Consensus 6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~ 84 (423)
T KOG2733|consen 6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQA 84 (423)
T ss_pred eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhh
Confidence 3589999999999999999999 7889999999998876531 1234 8889999999999999999
Q ss_pred CEEEEc
Q 024643 165 RSIICP 170 (265)
Q Consensus 165 d~vi~~ 170 (265)
.+++.|
T Consensus 85 ~vivN~ 90 (423)
T KOG2733|consen 85 RVIVNC 90 (423)
T ss_pred EEEEec
Confidence 999977
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.96 E-value=4.1e-05 Score=68.90 Aligned_cols=73 Identities=8% Similarity=0.049 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCC---cchhhhc------CCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDK---RNAMESF------GTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~---~~~~~~~------~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
..+++++|+|| |++|++++..|+..|++ |+++.|+. ++++++. ...+.+...|+.+.+++.+.++.+|.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 34678999999 89999999999999986 99999986 4443321 12345667899888888888888999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
+|++
T Consensus 203 lINa 206 (289)
T PRK12548 203 LVNA 206 (289)
T ss_pred EEEe
Confidence 9987
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.6e-05 Score=72.90 Aligned_cols=99 Identities=17% Similarity=0.152 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHH-HHcCCCEEEEcCch-H
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-ALRGVRSIICPSEG-F 174 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~-~~~~~d~vi~~~~~-~ 174 (265)
++++|.|.||||++|+++++.|..+ .++|+.+.++.+..+.+..........|+.+.+.+.. .++++|+||++.+. .
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~~~ 116 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLITQDLPNLVAVKDADFSDVDAVFCCLPHGT 116 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccCccccceecCCHHHhcCCCEEEEcCCHHH
Confidence 5679999999999999999999998 5899999886543322111112223344443333332 26899999988332 2
Q ss_pred ---HHHHHHhCCCCEEEEecccccccC
Q 024643 175 ---ISNAGSLKGVQHVILLSQLSVYRG 198 (265)
Q Consensus 175 ---~~~aa~~~gv~r~V~iSS~~v~~~ 198 (265)
+...+ +.| .++|-+|+..-..+
T Consensus 117 s~~i~~~~-~~g-~~VIDlSs~fRl~~ 141 (381)
T PLN02968 117 TQEIIKAL-PKD-LKIVDLSADFRLRD 141 (381)
T ss_pred HHHHHHHH-hCC-CEEEEcCchhccCC
Confidence 22233 344 68999998776543
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.7e-05 Score=66.91 Aligned_cols=67 Identities=6% Similarity=0.121 Sum_probs=48.0
Q ss_pred EEE-cCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC--HHHHHHHHcCCCEEEEc
Q 024643 103 LVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (265)
Q Consensus 103 lVt-GatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d--~~~l~~~~~~~d~vi~~ 170 (265)
.|| .+||++|++++++|+++|++|+++.|...... ....+++++.++..+ .+.+.+.++++|++|++
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~ 88 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-EPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHS 88 (229)
T ss_pred eecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-CCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeC
Confidence 455 57889999999999999999999987653211 112356666654332 24566777889999987
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.7e-05 Score=66.98 Aligned_cols=73 Identities=19% Similarity=0.247 Sum_probs=51.5
Q ss_pred CCCEEEEEcCC----------------cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHH
Q 024643 98 ARDAVLVTDGD----------------SDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT 159 (265)
Q Consensus 98 ~~~~vlVtGat----------------G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~ 159 (265)
.+++|+||+|. |++|++++++|+++|++|+++++......... ......+..|....+.+.+
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence 46889999875 99999999999999999999886432111111 1223345554444467778
Q ss_pred HHc--CCCEEEEc
Q 024643 160 ALR--GVRSIICP 170 (265)
Q Consensus 160 ~~~--~~d~vi~~ 170 (265)
+++ ++|+|||+
T Consensus 82 ~~~~~~~D~VIH~ 94 (229)
T PRK09620 82 IITHEKVDAVIMA 94 (229)
T ss_pred HhcccCCCEEEEC
Confidence 884 68999987
|
|
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=8.6e-05 Score=68.20 Aligned_cols=89 Identities=17% Similarity=0.114 Sum_probs=57.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCe---EEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~---V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~- 174 (265)
+++|+|.||||++|++|++.|.+++|. ++++.++.+..+.+.-.+.+....|+.+. .++++|+||++.+..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~~-----~~~~vDvVf~A~g~g~ 75 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTTF-----DFSGVDIALFSAGGSV 75 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCHH-----HHcCCCEEEECCChHH
Confidence 468999999999999999999998864 47777765433322212234555566432 346899999885433
Q ss_pred ---HHHHHHhCCCCEEEEeccc
Q 024643 175 ---ISNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 175 ---~~~aa~~~gv~r~V~iSS~ 193 (265)
......++|. .+|=+|+.
T Consensus 76 s~~~~~~~~~~G~-~VIDlS~~ 96 (334)
T PRK14874 76 SKKYAPKAAAAGA-VVIDNSSA 96 (334)
T ss_pred HHHHHHHHHhCCC-EEEECCch
Confidence 2222334565 56656664
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00016 Score=70.80 Aligned_cols=71 Identities=14% Similarity=0.217 Sum_probs=63.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~ 170 (265)
+.+++|.|+ |.+|+.++++|.++|++|++++.|+++.+.....+..++.+|.+|++.++++ ++++|.++.+
T Consensus 417 ~~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~ 488 (558)
T PRK10669 417 CNHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLT 488 (558)
T ss_pred CCCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEE
Confidence 568999999 9999999999999999999999999888777667899999999999988765 4788988766
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00018 Score=67.02 Aligned_cols=71 Identities=18% Similarity=0.241 Sum_probs=54.1
Q ss_pred CCEEEEEcCCcHHHHH--HHHHHHHCCCeEEEEEeCCcc---------------hhhh---cCCccEEeeeCCCCHHHHH
Q 024643 99 RDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRN---------------AMES---FGTYVESMAGDASNKKFLK 158 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~--l~~~Ll~~G~~V~~~~R~~~~---------------~~~~---~~~~v~~i~~D~~d~~~l~ 158 (265)
++++||||+++++|.+ +++.| ..|++|+++++..++ .... .+..+..+.+|+++.+++.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 5899999999999999 89999 999999988853211 1111 2334667899999998877
Q ss_pred HHHc-------CCCEEEEc
Q 024643 159 TALR-------GVRSIICP 170 (265)
Q Consensus 159 ~~~~-------~~d~vi~~ 170 (265)
++++ .+|.+|++
T Consensus 120 ~lie~I~e~~G~IDiLVnS 138 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYS 138 (398)
T ss_pred HHHHHHHHhcCCCCEEEEC
Confidence 6553 58999976
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.75 E-value=7.9e-05 Score=68.44 Aligned_cols=69 Identities=20% Similarity=0.201 Sum_probs=52.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-C-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVK-R-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|+||||+|+||+.++++|+++ | .+++++.|+..++..+.. ++..+|+. .+.+++.++|+|+++
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~---el~~~~i~---~l~~~l~~aDiVv~~ 222 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA---ELGGGKIL---SLEEALPEADIVVWV 222 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH---HhccccHH---hHHHHHccCCEEEEC
Confidence 466789999999999999999999865 5 699999998776654422 11123333 466889999999987
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00021 Score=65.37 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=66.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchh--hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~--~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-- 172 (265)
..||+|+|++|.||..++..|+.++ .+++++++++...+ ++.+........++.+.+++.++++++|+||++.+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~ 97 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP 97 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence 4699999999999999999999777 48999998772221 11111112233354444557789999999998711
Q ss_pred ---h---------------HHHHHHHhCCCCEEEEecccccc
Q 024643 173 ---G---------------FISNAGSLKGVQHVILLSQLSVY 196 (265)
Q Consensus 173 ---~---------------~~~~aa~~~gv~r~V~iSS~~v~ 196 (265)
+ .+...+++.+.+.+|+++|.-+.
T Consensus 98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD 139 (323)
T PLN00106 98 RKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVN 139 (323)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 1 02233567788999999986553
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00033 Score=57.58 Aligned_cols=64 Identities=9% Similarity=-0.028 Sum_probs=48.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+++|.+.|- |.+|+.+++.|+++|++|++.+|++++.+.+...+++. . ++..++++++|+|+.+
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~--~-----~s~~e~~~~~dvvi~~ 64 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEV--A-----DSPAEAAEQADVVILC 64 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEE--E-----SSHHHHHHHBSEEEE-
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhh--h-----hhhhhHhhcccceEee
Confidence 478999998 99999999999999999999999998887765444332 2 2345667778999976
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00023 Score=58.99 Aligned_cols=73 Identities=19% Similarity=0.238 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh---hcCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME---SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
++-..+|||+..++|+..++.|+++|..|.+++-..++-.+ ..+.++.+...|++..++++.++. ..|+.
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 45578999999999999999999999999999887655333 256778899999999988887764 46777
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+.|
T Consensus 88 vnc 90 (260)
T KOG1199|consen 88 VNC 90 (260)
T ss_pred eec
Confidence 755
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00059 Score=67.51 Aligned_cols=71 Identities=20% Similarity=0.238 Sum_probs=63.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~ 170 (265)
.++|+|.|. |.+|+.+++.|.++|+++++++.|+++.+.....+..++.+|.+|++.++++ +++++.++.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~ 471 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVIT 471 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEE
Confidence 568999998 9999999999999999999999999888777667889999999999999876 5789998877
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00011 Score=67.28 Aligned_cols=70 Identities=16% Similarity=0.068 Sum_probs=48.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEEeCCcchhhhcCCccE------EeeeCCCCHHHHHHHHcCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVE------SMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~v~------~i~~D~~d~~~l~~~~~~~d~ 166 (265)
.+|+||||+|++|+.++..|+..+ .+|++++++.... .+.+...+ ....|+.+..++.+.++++|+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~-~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi 81 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALK-ALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV 81 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccc-cccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence 479999999999999999999855 5899999965321 01111111 112344445567788999999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
||++
T Consensus 82 VI~t 85 (325)
T cd01336 82 AILV 85 (325)
T ss_pred EEEe
Confidence 9987
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00037 Score=66.09 Aligned_cols=95 Identities=19% Similarity=0.262 Sum_probs=72.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHH-HHcCCCEEEEcCch
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKT-ALRGVRSIICPSEG 173 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~-~~~~~d~vi~~~~~ 173 (265)
..+++|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+. ..++.++.+|.+|++.+.+ .+++++.++.+.+.
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~ 307 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTND 307 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCC
Confidence 34688999999 99999999999999999999999988765543 2467889999999998865 45789998876321
Q ss_pred -----HHHHHHHhCCCCEEEEecc
Q 024643 174 -----FISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 174 -----~~~~aa~~~gv~r~V~iSS 192 (265)
.....+++.+..++|....
T Consensus 308 ~~~n~~~~~~~~~~~~~~ii~~~~ 331 (453)
T PRK09496 308 DEANILSSLLAKRLGAKKVIALVN 331 (453)
T ss_pred cHHHHHHHHHHHHhCCCeEEEEEC
Confidence 1222346667777665544
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00044 Score=71.80 Aligned_cols=95 Identities=15% Similarity=0.099 Sum_probs=71.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC-Ce-------------EEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHH
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TR-------------IKALVKDKRNAMESFG--TYVESMAGDASNKKFLK 158 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~-------------V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~ 158 (265)
....+++|+|.|| |++|+..++.|++.. ++ |.+.+++.+.++.+.. ++++.++.|+.|.+++.
T Consensus 565 ~~~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 565 VTKKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLL 643 (1042)
T ss_pred ccccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHH
Confidence 3445778999998 999999999998753 33 7778888766655422 36788999999999999
Q ss_pred HHHcCCCEEEEcCch-H---HHHHHHhCCCCEEEEec
Q 024643 159 TALRGVRSIICPSEG-F---ISNAGSLKGVQHVILLS 191 (265)
Q Consensus 159 ~~~~~~d~vi~~~~~-~---~~~aa~~~gv~r~V~iS 191 (265)
++++++|+|+.+.+. + +..+|.++|+ +++-.|
T Consensus 644 ~~v~~~DaVIsalP~~~H~~VAkaAieaGk-Hvv~ek 679 (1042)
T PLN02819 644 KYVSQVDVVISLLPASCHAVVAKACIELKK-HLVTAS 679 (1042)
T ss_pred HhhcCCCEEEECCCchhhHHHHHHHHHcCC-CEEECc
Confidence 999999999988443 2 3444556664 565544
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00046 Score=62.86 Aligned_cols=94 Identities=15% Similarity=0.115 Sum_probs=60.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEEeCCcch---hhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNA---MESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~~~R~~~~~---~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
|+|+|+||+|.+|++++..|.. .++++++++|++... ..+.. .....+.+ .+.+++.+.++++|+||.+.+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIitaG 78 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISAG 78 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcCC
Confidence 6899999999999999988855 246888888875321 11111 11122333 112344567789999998711
Q ss_pred -----h-----H----------HHHHHHhCCCCEEEEeccccc
Q 024643 173 -----G-----F----------ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 173 -----~-----~----------~~~aa~~~gv~r~V~iSS~~v 195 (265)
+ . +...+++.+.+++|.+.|.-+
T Consensus 79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPV 121 (312)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCch
Confidence 1 0 233466778899998888544
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00036 Score=65.64 Aligned_cols=69 Identities=13% Similarity=0.068 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH
Q 024643 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160 (265)
Q Consensus 97 ~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~ 160 (265)
..+++|+|||| +|.+|.+++++|.++|++|++++++.+ .. .+.+ +...|+++.+++.++
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~--~~~~dv~~~~~~~~~ 260 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAG--VKRIDVESAQEMLDA 260 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCC--cEEEccCCHHHHHHH
Confidence 45789999999 888999999999999999999998763 21 1222 345799998877766
Q ss_pred H----cCCCEEEEc
Q 024643 161 L----RGVRSIICP 170 (265)
Q Consensus 161 ~----~~~d~vi~~ 170 (265)
+ ..+|++|++
T Consensus 261 v~~~~~~~DilI~~ 274 (399)
T PRK05579 261 VLAALPQADIFIMA 274 (399)
T ss_pred HHHhcCCCCEEEEc
Confidence 5 468999987
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00095 Score=61.47 Aligned_cols=95 Identities=14% Similarity=0.184 Sum_probs=65.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC---------------------cchhh----h--cCC--ccE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNAME----S--FGT--YVE 145 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~---------------------~~~~~----~--~~~--~v~ 145 (265)
....++|+|.|+ |++|.++++.|+..|. ++++++++. .|++. + ..+ .++
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 445678999998 8899999999999996 888888874 11111 1 122 355
Q ss_pred EeeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEeccc
Q 024643 146 SMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 146 ~i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~ 193 (265)
.+..|++ .+.+.++++++|.||.+.+. .+.+++.+.++. +|+.+..
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~D~~~~r~~in~~~~~~~ip-~i~~~~~ 150 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEVDLIIDATDNFDTRLLINDLSQKYNIP-WIYGGCV 150 (338)
T ss_pred EEeccCC-HHHHHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEEec
Confidence 5666764 45678889999999987443 255667777765 4555443
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00059 Score=54.42 Aligned_cols=87 Identities=10% Similarity=0.050 Sum_probs=69.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc--Cch---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--SEG--- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~--~~~--- 173 (265)
++++++.|. | .|.+++..|.+.|++|++++.++...+......+.++..|+.+++- +.-+++|.++.+ .+.
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHHHHH
Confidence 478999998 5 8999999999999999999999987766666678999999998763 456899999976 222
Q ss_pred HHHHHHHhCCCCEEEE
Q 024643 174 FISNAGSLKGVQHVIL 189 (265)
Q Consensus 174 ~~~~aa~~~gv~r~V~ 189 (265)
.+.+.+++.++.-+|.
T Consensus 93 ~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 93 FILELAKKINVPLIIK 108 (134)
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3556678888775554
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00018 Score=57.31 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=53.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCcchhhhc----CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESF----GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~~----~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++++|.|+ |+.|+.++..|...|.+ |+++.|+.++++.+. ...++++. +.+ +.+.+..+|++|.+
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~~---~~~~~~~~DivI~a 82 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LED---LEEALQEADIVINA 82 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GGG---HCHHHHTESEEEE-
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HHH---HHHHHhhCCeEEEe
Confidence 456789999999 99999999999999976 999999998876652 12333433 333 44778899999988
Q ss_pred C
Q 024643 171 S 171 (265)
Q Consensus 171 ~ 171 (265)
+
T Consensus 83 T 83 (135)
T PF01488_consen 83 T 83 (135)
T ss_dssp S
T ss_pred c
Confidence 3
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0007 Score=62.35 Aligned_cols=87 Identities=16% Similarity=0.152 Sum_probs=54.2
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEE---EEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH---
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIK---ALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--- 174 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~---~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~--- 174 (265)
+|+|.||||++|++|++.|.+++|.++ .+.+..+....+.-.+.+.+..|+. ...++++|++|.+.+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~s~ 75 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSVSK 75 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHHHH
Confidence 589999999999999999999887754 3335543322222223455666664 12357899999885432
Q ss_pred -HHHHHHhCCCCEEEEeccc
Q 024643 175 -ISNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 175 -~~~aa~~~gv~r~V~iSS~ 193 (265)
......++|+ ++|=.|+.
T Consensus 76 ~~a~~~~~~G~-~VID~ss~ 94 (339)
T TIGR01296 76 EFAPKAAKCGA-IVIDNTSA 94 (339)
T ss_pred HHHHHHHHCCC-EEEECCHH
Confidence 2222334565 46555553
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00048 Score=63.38 Aligned_cols=90 Identities=13% Similarity=0.083 Sum_probs=53.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEE--EEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA--LVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~--~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~- 174 (265)
+++|.|+||||++|+++++.|.+++|.+.- ..++.+.+.+.. ..+ ...++.+.+.. .++++|.+|++.+.-
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~---~~l~~~~~~~~--~~~~vD~vFla~p~~~ 78 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG---KNLRVREVDSF--DFSQVQLAFFAAGAAV 78 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC---cceEEeeCChH--HhcCCCEEEEcCCHHH
Confidence 478999999999999999999988765443 233333322111 111 22334333322 257899999884421
Q ss_pred ---HHHHHHhCCCCEEEEecccc
Q 024643 175 ---ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 175 ---~~~aa~~~gv~r~V~iSS~~ 194 (265)
+...+.++|+ ++|=.|+..
T Consensus 79 s~~~v~~~~~~G~-~VIDlS~~f 100 (336)
T PRK05671 79 SRSFAEKARAAGC-SVIDLSGAL 100 (336)
T ss_pred HHHHHHHHHHCCC-eEEECchhh
Confidence 3333455665 466666654
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0005 Score=53.66 Aligned_cols=88 Identities=19% Similarity=0.160 Sum_probs=51.7
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-c---hhhhcC--Ccc-EEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-N---AMESFG--TYV-ESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-~---~~~~~~--~~v-~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
+|.|+||||++|+.+++.|.+.- ++++.+..+.. . .....+ ... ....-| .+.+ .+.++|+||++.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED-ADPE----ELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE-TSGH----HHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee-cchh----HhhcCCEEEecCc
Confidence 68999999999999999999964 56655554443 2 221111 112 222222 3333 3489999998854
Q ss_pred hH----HHHHHHhCCCCEEEEecccc
Q 024643 173 GF----ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 173 ~~----~~~aa~~~gv~r~V~iSS~~ 194 (265)
.. ......+.|+ ++|=+|+..
T Consensus 76 ~~~~~~~~~~~~~~g~-~ViD~s~~~ 100 (121)
T PF01118_consen 76 HGASKELAPKLLKAGI-KVIDLSGDF 100 (121)
T ss_dssp HHHHHHHHHHHHHTTS-EEEESSSTT
T ss_pred hhHHHHHHHHHhhCCc-EEEeCCHHH
Confidence 32 2333456666 666666543
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00082 Score=61.99 Aligned_cols=95 Identities=14% Similarity=-0.014 Sum_probs=57.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhc--CCccEEe-eeCCCCHHHHHHHHcCCCEEEEcCc-h
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF--GTYVESM-AGDASNKKFLKTALRGVRSIICPSE-G 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~--~~~v~~i-~~D~~d~~~l~~~~~~~d~vi~~~~-~ 173 (265)
+++|+|+||||++|+++++.|.+. +++++++.++.+..+.+. ...+..+ ..++.+.+.. .+.++|+||++.+ .
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~ 79 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG 79 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH
Confidence 478999999999999999999987 588888776433221111 1111111 2233333332 4578999998843 2
Q ss_pred HHH---HHHHhCCCCEEEEecccccc
Q 024643 174 FIS---NAGSLKGVQHVILLSQLSVY 196 (265)
Q Consensus 174 ~~~---~aa~~~gv~r~V~iSS~~v~ 196 (265)
... ..+.++| .++|=.|+..-.
T Consensus 80 ~~~~~v~~a~~aG-~~VID~S~~fR~ 104 (343)
T PRK00436 80 VSMDLAPQLLEAG-VKVIDLSADFRL 104 (343)
T ss_pred HHHHHHHHHHhCC-CEEEECCcccCC
Confidence 222 2233444 578878876544
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0025 Score=58.71 Aligned_cols=96 Identities=18% Similarity=0.262 Sum_probs=66.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC---------------------cchhh----h--cCC--ccE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---------------------RNAME----S--FGT--YVE 145 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~---------------------~~~~~----~--~~~--~v~ 145 (265)
.....+|+|.|+ |++|.+++..|+..|. ++++++++. .|++. + ..+ .++
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 455678999999 9999999999999996 899998863 11111 0 122 344
Q ss_pred EeeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecccc
Q 024643 146 SMAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 146 ~i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~ 194 (265)
.+..+++ .+.+.+.++++|.||.+.+. .+.++|.+.++. +|+.+..+
T Consensus 100 ~~~~~~~-~~~~~~~~~~~DlVid~~Dn~~~r~~ln~~~~~~~iP-~i~~~~~g 151 (339)
T PRK07688 100 AIVQDVT-AEELEELVTGVDLIIDATDNFETRFIVNDAAQKYGIP-WIYGACVG 151 (339)
T ss_pred EEeccCC-HHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeeee
Confidence 5555664 45677889999999988433 356667777754 55555443
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0015 Score=64.96 Aligned_cols=71 Identities=18% Similarity=0.203 Sum_probs=62.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~ 170 (265)
.++|+|.|. |.+|+.+++.|.++|+++++++.|+++.+.....+..++.+|.+|++.++++ ++.++.++++
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~ 471 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 471 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEE
Confidence 578999999 9999999999999999999999999988777667889999999999988764 4688888877
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00061 Score=58.71 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=48.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC--------cc--EEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--------YV--ESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--------~v--~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
|+|.|+||+|.+|..++..|++.|++|++.+|++++.+.+... ++ .... .+ ..++++.+|.||+
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~---~~---~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG---AD---NAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE---eC---hHHHHhcCCEEEE
Confidence 6899999999999999999999999999999988765443211 11 1111 12 2456778999997
Q ss_pred cC
Q 024643 170 PS 171 (265)
Q Consensus 170 ~~ 171 (265)
+.
T Consensus 75 av 76 (219)
T TIGR01915 75 AV 76 (219)
T ss_pred EC
Confidence 73
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0007 Score=61.39 Aligned_cols=70 Identities=7% Similarity=-0.019 Sum_probs=57.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...++|-||+||.|..++++|..+|.+-.+..|+..++..+ .++.... .++.+++.+.+.+..+++|++|
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~--~p~~~p~~~~~~~~~~~VVlnc 78 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAV--FPLGVPAALEAMASRTQVVLNC 78 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccc--cCCCCHHHHHHHHhcceEEEec
Confidence 35689999999999999999999999998899999887644 3444433 4445599999999999999987
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.00091 Score=61.78 Aligned_cols=94 Identities=12% Similarity=0.010 Sum_probs=54.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEE-EeCCcc---hhhhcCCccEEe-eeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRN---AMESFGTYVESM-AGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~-~R~~~~---~~~~~~~~v~~i-~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
++|.|.||||++|+++++.|.+. +++++.+ +++.+. .....+ .+... ..++.+. +..+.++++|++|++.+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~-~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~ 78 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHP-HLRGLVDLNLEPI-DEEEIAEDADVVFLALPH 78 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCc-cccccCCceeecC-CHHHhhcCCCEEEECCCc
Confidence 57999999999999999999987 5788854 433321 111121 11111 1122211 122344589999988432
Q ss_pred -H---HHHHHHhCCCCEEEEecccccc
Q 024643 174 -F---ISNAGSLKGVQHVILLSQLSVY 196 (265)
Q Consensus 174 -~---~~~aa~~~gv~r~V~iSS~~v~ 196 (265)
. +...+.++| .++|=+|+..-.
T Consensus 79 ~~s~~~~~~~~~~G-~~VIDlS~~fR~ 104 (346)
T TIGR01850 79 GVSAELAPELLAAG-VKVIDLSADFRL 104 (346)
T ss_pred hHHHHHHHHHHhCC-CEEEeCChhhhc
Confidence 2 222234455 688888876543
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0025 Score=60.51 Aligned_cols=67 Identities=16% Similarity=0.124 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-ch----hhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NA----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~----~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+++|+|+|+++ +|..+++.|+++|++|++.+++.. .. .++...+++++.+|..+ +...++|.||.+
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~ 75 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVS 75 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEEC
Confidence 468999999966 999999999999999999998752 22 22233467788888776 345679999976
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00062 Score=61.72 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=33.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~ 137 (265)
.++|.|+|+ |.+|..++..|+++|++|++++|+++..+
T Consensus 2 ~~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 2 MGSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred CcEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 468999995 99999999999999999999999976543
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0076 Score=51.36 Aligned_cols=98 Identities=13% Similarity=0.174 Sum_probs=65.3
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC-------------------cchhhh------cCCccE--E
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAMES------FGTYVE--S 146 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~-------------------~~~~~~------~~~~v~--~ 146 (265)
......+|+|.|+ |++|.++++.|+..|. ++++++.+. .|++.. ..+.++ .
T Consensus 17 ~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 95 (202)
T TIGR02356 17 QRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTA 95 (202)
T ss_pred HHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 3556788999998 8999999999999995 899988773 111111 122333 3
Q ss_pred eeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEeccccc
Q 024643 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 147 i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v 195 (265)
+..++ +.+.+.+.++++|.||.+.+. .+.+.+.+.++ .+|+.+..+.
T Consensus 96 ~~~~i-~~~~~~~~~~~~D~Vi~~~d~~~~r~~l~~~~~~~~i-p~i~~~~~g~ 147 (202)
T TIGR02356 96 LKERV-TAENLELLINNVDLVLDCTDNFATRYLINDACVALGT-PLISAAVVGF 147 (202)
T ss_pred ehhcC-CHHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeccC
Confidence 33344 345677889999999988432 35566777775 4666655433
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0022 Score=59.25 Aligned_cols=91 Identities=15% Similarity=0.148 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCcc------------EEeeeCCCCHHHHHHHHcCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYV------------ESMAGDASNKKFLKTALRGV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v------------~~i~~D~~d~~~l~~~~~~~ 164 (265)
++++|+|+||||++|+++++.|.... .+++.+.++.+.......... .-+...-.+++. +.++
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~ 77 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDDV 77 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcCC
Confidence 35799999999999999999999876 488888666533321111000 001111124443 3689
Q ss_pred CEEEEcCch-H---HHHHHHhCCCCEEEEecc
Q 024643 165 RSIICPSEG-F---ISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 165 d~vi~~~~~-~---~~~aa~~~gv~r~V~iSS 192 (265)
|.|+.+.+. . +...+.+.|++.|.+.++
T Consensus 78 DvVf~a~p~~~s~~~~~~~~~~G~~vIDls~~ 109 (349)
T PRK08664 78 DIVFSALPSDVAGEVEEEFAKAGKPVFSNASA 109 (349)
T ss_pred CEEEEeCChhHHHHHHHHHHHCCCEEEECCch
Confidence 999877332 1 334455677755444433
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0012 Score=57.03 Aligned_cols=135 Identities=15% Similarity=0.146 Sum_probs=74.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh--hh---cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ES---FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~--~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..++.+||||++.+||..++..+.+.+-+.....++...++ .+ .+.......+|+.+...+.+..+ .-
T Consensus 4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 35678999999999999999999988866555444433222 11 11111223344444443333332 24
Q ss_pred CEEEEcCch-------H----------------------HHH-H---HHhCC-CCEEEEecccccccCCCCcccccchhH
Q 024643 165 RSIICPSEG-------F----------------------ISN-A---GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 165 d~vi~~~~~-------~----------------------~~~-a---a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
+.+|+..+. + +.. + .+... .+-+|++||.....+...+..|..
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~--- 160 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCS--- 160 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhh---
Confidence 566665110 0 000 0 11221 368999999887655443333332
Q ss_pred HHHHHHHHHHH-----HhC-CCCEEEEeCCCc
Q 024643 211 RKLAEQDESML-----MAS-GIPYTIIRTGVL 236 (265)
Q Consensus 211 ~~~k~~~E~~l-----~~~-gl~~tivRPg~l 236 (265)
.|.+.+.+. +++ ++.+..++||.+
T Consensus 161 --~KaAr~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 161 --SKAARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred --hHHHHHHHHHHHhhcCccceeEEEccCCcc
Confidence 344444433 233 788999999986
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0073 Score=47.85 Aligned_cols=94 Identities=15% Similarity=0.182 Sum_probs=63.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcc-------------------hhhh------cCC--ccEEeeeC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN-------------------AMES------FGT--YVESMAGD 150 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~-------------------~~~~------~~~--~v~~i~~D 150 (265)
.++|+|.|+ |.+|.++++.|+..|. ++++++.+.-. ++.+ ..+ .++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 468999999 8999999999999996 78888875411 1100 122 34555566
Q ss_pred CCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEeccccc
Q 024643 151 ASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 151 ~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v 195 (265)
+ +.+.+.+.++++|.||.+.+. .+.+.+.+.+. .+|+.+..+.
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~-p~i~~~~~g~ 128 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGI-PFIDAGVNGF 128 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT--EEEEEEEETT
T ss_pred c-ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCC-CEEEEEeecC
Confidence 6 556778888999999987332 35556777775 5777665543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0018 Score=56.73 Aligned_cols=69 Identities=14% Similarity=0.224 Sum_probs=55.1
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhhc-------CCccEEeeeCCCCHHHHHHHHc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF-------GTYVESMAGDASNKKFLKTALR 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~~-------~~~v~~i~~D~~d~~~l~~~~~ 162 (265)
...+++..||||-||.=|+.|++.|+.+||+|..+.|..+. .+.++ +.....+.+|++|...+.+.+.
T Consensus 24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~ 103 (376)
T KOG1372|consen 24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS 103 (376)
T ss_pred CcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence 34456789999999999999999999999999999986542 33332 2356788899999999988875
Q ss_pred C
Q 024643 163 G 163 (265)
Q Consensus 163 ~ 163 (265)
-
T Consensus 104 ~ 104 (376)
T KOG1372|consen 104 T 104 (376)
T ss_pred c
Confidence 4
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0027 Score=57.14 Aligned_cols=71 Identities=8% Similarity=-0.010 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
...+++++|+|. |.+|+.+++.|...|++|++..|+.++.......+... .+.+.+.+.++++|.||.+.+
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-----~~~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-----FPLNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-----ecHHHHHHHhccCCEEEECCC
Confidence 456789999999 88999999999999999999999886654332222222 134557788899999998744
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0023 Score=54.74 Aligned_cols=67 Identities=10% Similarity=0.085 Sum_probs=43.6
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
++..+||+|.||..|+++|.+.||+|++.+|+.++..+......... -..-+..++.+.+|+||++.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~----i~~~~~~dA~~~aDVVvLAV 68 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPL----ITGGSNEDAAALADVVVLAV 68 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccc----cccCChHHHHhcCCEEEEec
Confidence 34455566999999999999999999999776654322211110000 11223456788899999883
|
|
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0081 Score=54.22 Aligned_cols=66 Identities=11% Similarity=0.039 Sum_probs=51.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|. |.+|..+++.|++.|++|.+.+|++++.+.+...++.. ..+.+.+.+.++.+|+|+++
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~----~~s~~~~~~~~~~~dvIi~~ 66 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTG----VANLRELSQRLSAPRVVWVM 66 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcc----cCCHHHHHhhcCCCCEEEEE
Confidence 57999997 99999999999999999999999998776654333221 24566666667788999877
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0016 Score=52.47 Aligned_cols=69 Identities=14% Similarity=0.038 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..++++|+|+ |.+|..+++.|.+.| ++|++.+|+.++.++.... ....+..+..+.+ +.++++|+||++
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Dvvi~~ 88 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDLE---ELLAEADLIINT 88 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecchh---hccccCCEEEeC
Confidence 3578999998 999999999999996 8899999988765543211 1111223344433 447899999987
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.014 Score=50.87 Aligned_cols=145 Identities=12% Similarity=0.056 Sum_probs=85.8
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC-CC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--cCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--~~~d~vi~~ 170 (265)
......+|+|||+-|.+|..++..|..+ |- .|++.+--... .... ..-.++..|+.|...+++++ +.+|-+||.
T Consensus 40 ~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~-~~GPyIy~DILD~K~L~eIVVn~RIdWL~Hf 117 (366)
T KOG2774|consen 40 QTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVT-DVGPYIYLDILDQKSLEEIVVNKRIDWLVHF 117 (366)
T ss_pred ccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhc-ccCCchhhhhhccccHHHhhcccccceeeeH
Confidence 3556679999999999999999988775 54 44443322111 1111 12345677888888888876 346666654
Q ss_pred Cc---------------------hHHHHHHHhCCCCEEEEecccccccCCCCcccccc------hhHHH-HHHH----HH
Q 024643 171 SE---------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK------GNARK-LAEQ----DE 218 (265)
Q Consensus 171 ~~---------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~------~~~~~-~k~~----~E 218 (265)
+. ..+.+.+++.+.+ +..-|+.+++++.++-++... ...|. +|.. .|
T Consensus 118 SALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL~-iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~GE 196 (366)
T KOG2774|consen 118 SALLSAVGETNVPLALQVNIRGVHNILQVAAKHKLK-VFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELLGE 196 (366)
T ss_pred HHHHHHhcccCCceeeeecchhhhHHHHHHHHcCee-EeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHHHH
Confidence 10 1244556666654 455688888877665443321 11121 3333 34
Q ss_pred HHHHhCCCCEEEEeCCC-ccCCCCC
Q 024643 219 SMLMASGIPYTIIRTGV-LQNTPGG 242 (265)
Q Consensus 219 ~~l~~~gl~~tivRPg~-l~~~~~~ 242 (265)
-+-...|+++-.+|... +.+.+.+
T Consensus 197 y~~hrFg~dfr~~rfPg~is~~~pg 221 (366)
T KOG2774|consen 197 YFNHRFGVDFRSMRFPGIISATKPG 221 (366)
T ss_pred HHHhhcCccceecccCcccccCCCC
Confidence 44455789998998665 4444433
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0012 Score=59.06 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=49.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++++|+|+ |++|+.++..|...| .+|++++|+.++++.+...--.....++ +. ...+.+.++|.||.+
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~~~~DivIna 192 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEELADFDLIINA 192 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhccccCCEEEEC
Confidence 345678999998 999999999999999 7999999998776554211000000111 10 223566789999987
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0074 Score=55.39 Aligned_cols=97 Identities=9% Similarity=0.045 Sum_probs=65.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~- 174 (265)
..++.+|+|+|+. ++|..-++.+.+.|.+|++++|+++|.+....-+.+.+.-.- |.+.+.+.-+.+|.++.+.+..
T Consensus 164 ~~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~-~~~~~~~~~~~~d~ii~tv~~~~ 241 (339)
T COG1064 164 VKPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS-DSDALEAVKEIADAIIDTVGPAT 241 (339)
T ss_pred CCCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC-CchhhHHhHhhCcEEEECCChhh
Confidence 4568899999994 999999998888999999999999987655443444333322 6655555555599999773332
Q ss_pred HHHHHHhC-CCCEEEEecccc
Q 024643 175 ISNAGSLK-GVQHVILLSQLS 194 (265)
Q Consensus 175 ~~~aa~~~-gv~r~V~iSS~~ 194 (265)
+..+++.. .-.+++.++-..
T Consensus 242 ~~~~l~~l~~~G~~v~vG~~~ 262 (339)
T COG1064 242 LEPSLKALRRGGTLVLVGLPG 262 (339)
T ss_pred HHHHHHHHhcCCEEEEECCCC
Confidence 33332221 124788887653
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0034 Score=58.52 Aligned_cols=72 Identities=11% Similarity=0.032 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+|+|+|+ |.+|+..++.|...|.+|++++|+.++.+.+.......+..+..+.+.+.+.+.++|++|.+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGA 237 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEc
Confidence 3466999988 99999999999999999999999887655432211122334567788889999999999976
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0092 Score=55.12 Aligned_cols=89 Identities=13% Similarity=0.110 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCe---EEEEEe--CCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR---IKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~---V~~~~R--~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
..++|.|.||||++|++|++.|.+++|. +..+.. +..+.... .+.+....++. . +.+.++|++|++.+
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~--~~~~~~v~~~~-~----~~~~~~D~vf~a~p 78 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTF--EGRDYTVEELT-E----DSFDGVDIALFSAG 78 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeee--cCceeEEEeCC-H----HHHcCCCEEEECCC
Confidence 4578999999999999999999998874 333332 22221111 12233333332 2 23578999998733
Q ss_pred -hHH---HHHHHhCCCCEEEEecccc
Q 024643 173 -GFI---SNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 173 -~~~---~~aa~~~gv~r~V~iSS~~ 194 (265)
+.. ...+.++|+ ++|=.|+..
T Consensus 79 ~~~s~~~~~~~~~~g~-~VIDlS~~f 103 (344)
T PLN02383 79 GSISKKFGPIAVDKGA-VVVDNSSAF 103 (344)
T ss_pred cHHHHHHHHHHHhCCC-EEEECCchh
Confidence 221 112233443 566666654
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.015 Score=57.42 Aligned_cols=89 Identities=13% Similarity=0.134 Sum_probs=63.2
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc---
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP--- 170 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~--- 170 (265)
.....+++|+|.|+ |.+|+.+++.+.+.|++|++++.++........ -+.+.+|+.|.+.+.++.+.+|++...
T Consensus 17 ~~~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A--D~~~v~~~~D~~~l~~~a~~~dvIt~e~e~ 93 (577)
T PLN02948 17 VHGVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSVA--ARHVVGSFDDRAAVREFAKRCDVLTVEIEH 93 (577)
T ss_pred ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceeeeCCCCCHHHHHHHHHHCCEEEEecCC
Confidence 33467789999999 799999999999999999999887653221111 134568899999999888889987644
Q ss_pred CchHHHHHHHhCCCC
Q 024643 171 SEGFISNAGSLKGVQ 185 (265)
Q Consensus 171 ~~~~~~~aa~~~gv~ 185 (265)
.+......+...|+.
T Consensus 94 v~~~~l~~le~~gi~ 108 (577)
T PLN02948 94 VDVDTLEALEKQGVD 108 (577)
T ss_pred CCHHHHHHHHhcCCc
Confidence 112222444555543
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0072 Score=56.23 Aligned_cols=69 Identities=14% Similarity=0.189 Sum_probs=55.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+++|+|.|+ |.+|+.++..+.+.|++|++++.++........ -+.+.+|+.|.+.+.++.+.+|++..-
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a--d~~~~~~~~D~~~l~~~a~~~dvit~e 70 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA--DEVIVADYDDVAALRELAEQCDVITYE 70 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC--ceEEecCCCCHHHHHHHHhcCCEEEeC
Confidence 468999999 899999999999999999999987644221111 245668999999999999999987543
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.005 Score=57.81 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=51.6
Q ss_pred CCCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHH-HH
Q 024643 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL-KT 159 (265)
Q Consensus 97 ~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l-~~ 159 (265)
..+++|+|||| ||.+|.++++.|..+|++|+++.+..... .+.++ ...|+.+.+++ ..
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---~~~~~--~~~~v~~~~~~~~~ 257 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---TPPGV--KSIKVSTAEEMLEA 257 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---CCCCc--EEEEeccHHHHHHH
Confidence 45789999999 35699999999999999999988765421 22233 45788888777 43
Q ss_pred HH----cCCCEEEEc
Q 024643 160 AL----RGVRSIICP 170 (265)
Q Consensus 160 ~~----~~~d~vi~~ 170 (265)
++ ..+|++|++
T Consensus 258 ~~~~~~~~~D~~i~~ 272 (390)
T TIGR00521 258 ALNELAKDFDIFISA 272 (390)
T ss_pred HHHhhcccCCEEEEc
Confidence 44 367999877
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.017 Score=50.92 Aligned_cols=85 Identities=15% Similarity=0.149 Sum_probs=63.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCchH--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSEGF-- 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~~~-- 174 (265)
+++|+|.|||+ =|+.+++.|.++|++|++.+-..... .....+.++.+-+.|.+.+.+.++ +++.||-++-+|
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~--~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDATHPfA~ 78 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG--PADLPGPVRVGGFGGAEGLAAYLREEGIDLVIDATHPYAA 78 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC--cccCCceEEECCCCCHHHHHHHHHHCCCCEEEECCCccHH
Confidence 57899999987 49999999999999988877665433 223467888888889999999995 789999773322
Q ss_pred -----HHHHHHhCCCCE
Q 024643 175 -----ISNAGSLKGVQH 186 (265)
Q Consensus 175 -----~~~aa~~~gv~r 186 (265)
..++|++.++..
T Consensus 79 ~is~~a~~ac~~~~ipy 95 (248)
T PRK08057 79 QISANAAAACRALGIPY 95 (248)
T ss_pred HHHHHHHHHHHHhCCcE
Confidence 344556655543
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.003 Score=57.84 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=46.5
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEEeCC--cchhhhcCCccEEeeeCCCCH-----------HHHHHH
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDK--RNAMESFGTYVESMAGDASNK-----------KFLKTA 160 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-------~~V~~~~R~~--~~~~~~~~~~v~~i~~D~~d~-----------~~l~~~ 160 (265)
+|.|+||+|.+|+.++..|+..| ++++++++++ ++ .+....|+.|. ....+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~--------~~g~~~Dl~d~~~~~~~~~~i~~~~~~~ 73 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA--------LEGVVMELQDCAFPLLKGVVITTDPEEA 73 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc--------cceeeeehhhhcccccCCcEEecChHHH
Confidence 79999999999999999999866 2588998876 32 23334444443 345688
Q ss_pred HcCCCEEEEc
Q 024643 161 LRGVRSIICP 170 (265)
Q Consensus 161 ~~~~d~vi~~ 170 (265)
++++|+||++
T Consensus 74 ~~~aDiVVit 83 (323)
T cd00704 74 FKDVDVAILV 83 (323)
T ss_pred hCCCCEEEEe
Confidence 9999999987
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0042 Score=56.71 Aligned_cols=81 Identities=12% Similarity=0.058 Sum_probs=52.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC--ccEEeee-----CCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT--YVESMAG-----DASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~--~v~~i~~-----D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.|+|.|.|+ |.+|..++..|++.|++|+++.|++++.+.+... +...+.+ .+.-.++..++++.+|.||.+.
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 578999988 9999999999999999999999987665443211 0000000 0111123445678899999773
Q ss_pred -chHHHHHHH
Q 024643 172 -EGFISNAGS 180 (265)
Q Consensus 172 -~~~~~~aa~ 180 (265)
...+.+++.
T Consensus 83 ~~~~~~~v~~ 92 (328)
T PRK14618 83 PSKALRETLA 92 (328)
T ss_pred chHHHHHHHH
Confidence 333444433
|
|
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.013 Score=55.18 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=56.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~ 170 (265)
+.+++|.|. |.+|+.++++|.++|++|++++.+. .++....+..++.+|.+|++.++++ +++++.++.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~--~~~~~~~g~~vI~GD~td~e~L~~AgI~~A~aVI~~ 309 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLG--LEHRLPDDADLIPGDSSDSAVLKKAGAARARAILAL 309 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECch--hhhhccCCCcEEEeCCCCHHHHHhcCcccCCEEEEc
Confidence 567999998 7899999999999999999988663 2334456788999999999998865 5788998876
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0039 Score=50.14 Aligned_cols=64 Identities=16% Similarity=0.220 Sum_probs=46.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh----------cCCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~----------~~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
|||.|+||+|.+|+.++..|...+ .+++++++++++++.. ......+... + .+.++++|+|
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~---~----~~~~~~aDiv 73 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSG---D----YEALKDADIV 73 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEES---S----GGGGTTESEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccc---c----ccccccccEE
Confidence 689999999999999999999987 5899999987654322 1112222222 2 2357788988
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+.+
T Consensus 74 vit 76 (141)
T PF00056_consen 74 VIT 76 (141)
T ss_dssp EET
T ss_pred EEe
Confidence 877
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.021 Score=51.55 Aligned_cols=66 Identities=9% Similarity=-0.022 Sum_probs=48.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|. |.+|..+++.|++.|++|.+.+|++++.+.+...++.. ..+++.+.+.+.+.|+||.+
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~~~~e~~~~~~~~dvvi~~ 66 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATG----ADSLEELVAKLPAPRVVWLM 66 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCee----cCCHHHHHhhcCCCCEEEEE
Confidence 57899986 99999999999999999999999988776554333332 23455444444456888866
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.018 Score=49.09 Aligned_cols=75 Identities=9% Similarity=0.095 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeC---Ccchhh-------------------h--cCC--ccEEe
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAME-------------------S--FGT--YVESM 147 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~---~~~~~~-------------------~--~~~--~v~~i 147 (265)
......+|+|.|+ |++|..++..|+..|. ++++++++ .+.+.. + ..+ .++.+
T Consensus 17 ~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~ 95 (200)
T TIGR02354 17 QKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAY 95 (200)
T ss_pred HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEe
Confidence 3456788999999 8899999999999997 79999887 211110 0 112 34444
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 148 AGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++ .+.+.+.++++|.||.+.
T Consensus 96 ~~~i~-~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 96 DEKIT-EENIDKFFKDADIVCEAF 118 (200)
T ss_pred eeeCC-HhHHHHHhcCCCEEEECC
Confidence 45554 466788899999999773
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0064 Score=51.22 Aligned_cols=64 Identities=9% Similarity=0.068 Sum_probs=39.8
Q ss_pred EEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC--HHHHHHHHcCCCEEEEc
Q 024643 104 VTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICP 170 (265)
Q Consensus 104 VtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d--~~~l~~~~~~~d~vi~~ 170 (265)
=--.||..|.+|++.+..+|++|+.+..... .. .+.+++.+..+-.+ .+.+.+.+...|++|++
T Consensus 24 tN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~--~p~~~~~i~v~sa~em~~~~~~~~~~~Di~I~a 89 (185)
T PF04127_consen 24 TNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP--PPPGVKVIRVESAEEMLEAVKELLPSADIIIMA 89 (185)
T ss_dssp EES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------TTEEEEE-SSHHHHHHHHHHHGGGGSEEEE-
T ss_pred cCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc--ccccceEEEecchhhhhhhhccccCcceeEEEe
Confidence 3346899999999999999999999988742 11 24567776654221 13445566778999987
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0076 Score=51.33 Aligned_cols=42 Identities=10% Similarity=0.094 Sum_probs=36.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
..+|+|+|+|. |.+|+.+++.|.+.|++|++.+++.++....
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~ 67 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARA 67 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 35789999999 7999999999999999999999887665443
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0072 Score=44.63 Aligned_cols=71 Identities=11% Similarity=0.151 Sum_probs=47.7
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC---CeEEEE-EeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEc-CchH
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKAL-VKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEGF 174 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~-~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~~ 174 (265)
||.|.|+ |.+|..+++.|++.| ++|.+. .|++++..++.. -.+..... + ..++++.+|++|++ .+..
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~---~---~~~~~~~advvilav~p~~ 73 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD---D---NEEAAQEADVVILAVKPQQ 73 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE---E---HHHHHHHTSEEEE-S-GGG
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC---C---hHHhhccCCEEEEEECHHH
Confidence 5778865 999999999999999 999965 899887765522 12333222 2 34566689999987 4433
Q ss_pred HHHH
Q 024643 175 ISNA 178 (265)
Q Consensus 175 ~~~a 178 (265)
+.+.
T Consensus 74 ~~~v 77 (96)
T PF03807_consen 74 LPEV 77 (96)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 3333
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0072 Score=54.63 Aligned_cols=72 Identities=10% Similarity=0.010 Sum_probs=55.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
...+++++|+|. |.+|+.++..|...|++|++++|+.++.......+.+.+ +.+.+.+.++++|+||.+.+.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-----~~~~l~~~l~~aDiVI~t~p~ 220 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-----HLSELAEEVGKIDIIFNTIPA 220 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-----cHHHHHHHhCCCCEEEECCCh
Confidence 345789999998 889999999999999999999999765443333333332 335677888999999988543
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.021 Score=50.05 Aligned_cols=93 Identities=9% Similarity=0.034 Sum_probs=60.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCCccE--Ee
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGTYVE--SM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~~v~--~i 147 (265)
.....+|+|.|+ |++|..+++.|+..| -++++++.+.- |++. + ..+.++ .+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 455678999999 899999999999999 57777776541 1110 0 123333 33
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEec
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iS 191 (265)
...+ +.+.+.+.++++|.||.+.+. .+.+++.+.++. +|+.+
T Consensus 100 ~~~i-~~~~~~~~~~~~DlVvd~~D~~~~r~~ln~~~~~~~ip-~v~~~ 146 (240)
T TIGR02355 100 NAKL-DDAELAALIAEHDIVVDCTDNVEVRNQLNRQCFAAKVP-LVSGA 146 (240)
T ss_pred eccC-CHHHHHHHhhcCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence 3333 445677889999999988432 255667777654 34433
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0033 Score=54.67 Aligned_cols=62 Identities=8% Similarity=0.125 Sum_probs=43.7
Q ss_pred EEEc-CCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-------cCCCEEEEc
Q 024643 103 LVTD-GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICP 170 (265)
Q Consensus 103 lVtG-atG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-------~~~d~vi~~ 170 (265)
.||. ++|+||+++++.|+++|++|+++++... .. .. ....+|+.+.+++.+.+ ..+|++|++
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~---~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn 87 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK---PE--PHPNLSIREIETTKDLLITLKELVQEHDILIHS 87 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc---cc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4555 5899999999999999999999876321 11 10 12347888877666443 468999987
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.013 Score=53.74 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHHc--CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~~--~~d~vi~~~ 171 (265)
.++.+|||+||+|++|...++.+...|+.+++.+.+.++.+.+...+...+ .|+.+. +.+++... ++|+|+...
T Consensus 141 ~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~v-i~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 141 KPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHV-INYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEE-EcCCcccHHHHHHHHcCCCCceEEEECC
Confidence 347899999999999999999999999777777666665553333332221 234332 33444443 589999773
Q ss_pred -chHHHHHH--HhCCCCEEEEecccc
Q 024643 172 -EGFISNAG--SLKGVQHVILLSQLS 194 (265)
Q Consensus 172 -~~~~~~aa--~~~gv~r~V~iSS~~ 194 (265)
...+.... ...+ .+++.+...+
T Consensus 220 G~~~~~~~l~~l~~~-G~lv~ig~~~ 244 (326)
T COG0604 220 GGDTFAASLAALAPG-GRLVSIGALS 244 (326)
T ss_pred CHHHHHHHHHHhccC-CEEEEEecCC
Confidence 33333322 2333 6888887765
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.014 Score=50.60 Aligned_cols=95 Identities=13% Similarity=0.130 Sum_probs=61.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc-------------------chhhh------cCC--ccEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAMES------FGT--YVES 146 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~-------------------~~~~~------~~~--~v~~ 146 (265)
......+|+|.|+ |++|.++++.|+..|. ++++++.+.- |++.. ..+ .++.
T Consensus 17 ~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~ 95 (228)
T cd00757 17 EKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA 95 (228)
T ss_pred HHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence 3455789999998 8999999999999995 7777765431 11100 122 3444
Q ss_pred eeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecc
Q 024643 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 147 i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS 192 (265)
+..++ +.+.+.+.++++|+||.+.+. .+.+.+.+.++ .+|+.+.
T Consensus 96 ~~~~i-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~i-p~i~~g~ 144 (228)
T cd00757 96 YNERL-DAENAEELIAGYDLVLDCTDNFATRYLINDACVKLGK-PLVSGAV 144 (228)
T ss_pred eccee-CHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHcCC-CEEEEEe
Confidence 55455 346677888999999988332 35556666665 3444443
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0079 Score=49.88 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=46.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....+++|+|.|+++.+|..+++.|.++|.+|+++.|+. +.+.+.+..+|+||.+
T Consensus 40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsa 94 (168)
T cd01080 40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVA 94 (168)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEc
Confidence 457789999999966789999999999999999888762 3466788899999987
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.016 Score=52.59 Aligned_cols=96 Identities=10% Similarity=0.031 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCC---H-HHHHHHH-cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASN---K-KFLKTAL-RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d---~-~~l~~~~-~~~d~vi~~ 170 (265)
.++.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+.. .+++.+ .|..+ . +.+.+.. .++|.++.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvd~v~d~ 228 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA-FNYKEEPDLDAALKRYFPNGIDIYFDN 228 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee-EEcCCcccHHHHHHHhCCCCcEEEEEC
Confidence 456899999999999999999888899999999988877654432 233222 23222 1 2233222 468999876
Q ss_pred Cch-HHHHHHHh-CCCCEEEEeccc
Q 024643 171 SEG-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 171 ~~~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
.++ .+.++... ..-.+++.++..
T Consensus 229 ~g~~~~~~~~~~l~~~G~iv~~G~~ 253 (338)
T cd08295 229 VGGKMLDAVLLNMNLHGRIAACGMI 253 (338)
T ss_pred CCHHHHHHHHHHhccCcEEEEeccc
Confidence 332 22333222 223578877653
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.015 Score=51.48 Aligned_cols=65 Identities=15% Similarity=0.075 Sum_probs=42.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEE-eCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV-KDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~-R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+++|.|+|++|.+|+.+++.+.+. +++++++. ++.++.... -..++...+++.++++++|+|+.+
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-------~~~~i~~~~dl~~ll~~~DvVid~ 67 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-------GALGVAITDDLEAVLADADVLIDF 67 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-------CCCCccccCCHHHhccCCCEEEEC
Confidence 378999999999999999988864 68887754 444333211 112232233455556678888754
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0071 Score=54.72 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=48.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEe-------eeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------AGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i-------~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+|+|.|.|+ |.+|..++..|++.|++|.+++|++++.+.+........ ...+.-..+..++++++|.+|.+.
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 368999998 999999999999999999999998766554422110000 000111123445678899999773
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.029 Score=48.83 Aligned_cols=96 Identities=17% Similarity=0.259 Sum_probs=62.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc--------------------chhh----h--cCCc--cEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR--------------------NAME----S--FGTY--VES 146 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~--------------------~~~~----~--~~~~--v~~ 146 (265)
.....+|+|.|+ |++|.++++.|+..| .++++++.+.- +.+. + ..+. ++.
T Consensus 24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~ 102 (231)
T PRK08328 24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET 102 (231)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence 445678999999 899999999999999 57888775431 1000 0 1222 334
Q ss_pred eeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecccc
Q 024643 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 147 i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~ 194 (265)
+...+ +.+.+.+.++++|.||.+.+. .+.++|.+.++. +|+.+..+
T Consensus 103 ~~~~~-~~~~~~~~l~~~D~Vid~~d~~~~r~~l~~~~~~~~ip-~i~g~~~g 153 (231)
T PRK08328 103 FVGRL-SEENIDEVLKGVDVIVDCLDNFETRYLLDDYAHKKGIP-LVHGAVEG 153 (231)
T ss_pred EeccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEeecc
Confidence 44444 445577788999999987332 255567777754 55544443
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.037 Score=47.04 Aligned_cols=100 Identities=11% Similarity=0.147 Sum_probs=64.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc---------------------chhh----h--cCCc--cE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR---------------------NAME----S--FGTY--VE 145 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~---------------------~~~~----~--~~~~--v~ 145 (265)
.....+|+|.|+ |++|.++++.|+..| .++++++.+.- |++. + ..+. ++
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 445678999999 559999999999999 56888876521 0000 0 1233 34
Q ss_pred EeeeCCCC-HHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEeccccccc
Q 024643 146 SMAGDASN-KKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSVYR 197 (265)
Q Consensus 146 ~i~~D~~d-~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v~~ 197 (265)
.+..++.+ .+...+.++.+|+||.+... .+.+.|++.++ .+|+.++.+.++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~dvVi~~~d~~~~~~~ln~~c~~~~i-p~i~~~~~G~~G 151 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKFTLVIATEENYERTAKVNDVCRKHHI-PFISCATYGLIG 151 (198)
T ss_pred EEecccccchhhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEEeecCEE
Confidence 44444532 44566778999999988332 25566777776 466666655543
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0098 Score=46.65 Aligned_cols=84 Identities=12% Similarity=0.040 Sum_probs=47.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHH-CCCeEEEE-EeCCcchh-----hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc-C
Q 024643 100 DAVLVTDGDSDIGQMVILSLIV-KRTRIKAL-VKDKRNAM-----ESFGTYVESMAGDASNKKFLKTALRGVRSIICP-S 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~-~R~~~~~~-----~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~ 171 (265)
|+|+|.|++|.+|+.+++.+.+ .++++.+. +|+.+... ++.+.. ...+.-.+++.++++.+|++|-. .
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~----~~~~~v~~~l~~~~~~~DVvIDfT~ 76 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG----PLGVPVTDDLEELLEEADVVIDFTN 76 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS----T-SSBEBS-HHHHTTH-SEEEEES-
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC----CcccccchhHHHhcccCCEEEEcCC
Confidence 5899999999999999999999 67887665 44442111 011100 11111124566777779999865 3
Q ss_pred chH---HHHHHHhCCCCEE
Q 024643 172 EGF---ISNAGSLKGVQHV 187 (265)
Q Consensus 172 ~~~---~~~aa~~~gv~r~ 187 (265)
+.. ....+.++|+.-+
T Consensus 77 p~~~~~~~~~~~~~g~~~V 95 (124)
T PF01113_consen 77 PDAVYDNLEYALKHGVPLV 95 (124)
T ss_dssp HHHHHHHHHHHHHHT-EEE
T ss_pred hHHhHHHHHHHHhCCCCEE
Confidence 332 2333555665433
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0035 Score=51.15 Aligned_cols=71 Identities=14% Similarity=0.085 Sum_probs=47.1
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
||.|.|| |..|.+++..|..+|++|.+..|+++..+.+. .++++.-. .+.=..++.++++++|.++++.+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~-~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPE-NIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEET-TEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCc-ccccccCHHHHhCcccEEEeccc
Confidence 6899999 99999999999999999999999986554331 11111111 01001235678899999998844
Q ss_pred h
Q 024643 173 G 173 (265)
Q Consensus 173 ~ 173 (265)
.
T Consensus 79 s 79 (157)
T PF01210_consen 79 S 79 (157)
T ss_dssp G
T ss_pred H
Confidence 3
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.012 Score=52.61 Aligned_cols=69 Identities=7% Similarity=-0.001 Sum_probs=45.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCC----CHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~----d~~~l~~~~~~~d~vi~~ 170 (265)
|+|+|.|+ |.+|..++..|.+.|++|++++|+.+..+.+...++.+-.++.. -.++.... +.+|.+|++
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila 73 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILA 73 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEe
Confidence 57999998 99999999999999999999999776654443222221011110 01112223 788998877
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.017 Score=52.70 Aligned_cols=72 Identities=14% Similarity=0.090 Sum_probs=53.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCC------CHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDAS------NKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~------d~~~l~~~~~~~d~vi~~ 170 (265)
+++|.|.|+ |.-|.+|+..|.+.||+|++-.|+++...++.. .+.++.. ++. -..++.++++++|.++.+
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp-~i~lp~~l~at~Dl~~a~~~ad~iv~a 78 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLP-GILLPPNLKATTDLAEALDGADIIVIA 78 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccC-CccCCcccccccCHHHHHhcCCEEEEE
Confidence 378999999 889999999999999999999999876655432 2333333 222 234577889999999987
Q ss_pred Cc
Q 024643 171 SE 172 (265)
Q Consensus 171 ~~ 172 (265)
.+
T Consensus 79 vP 80 (329)
T COG0240 79 VP 80 (329)
T ss_pred CC
Confidence 44
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.063 Score=48.39 Aligned_cols=66 Identities=9% Similarity=-0.035 Sum_probs=46.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|. |.+|..+++.|++.|++|++.+|++++.+.+...++.. ..+++.+.+....+|+||.+
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~----~~s~~~~~~~~~~advVi~~ 66 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITA----RHSLEELVSKLEAPRTIWVM 66 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCee----cCCHHHHHHhCCCCCEEEEE
Confidence 47889986 99999999999999999999999987766553333221 22444333323346888866
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.029 Score=53.08 Aligned_cols=88 Identities=16% Similarity=0.072 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--h
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--G 173 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~ 173 (265)
...+++|+|.|+ |.||+.++..+...|.+|+++.+++.+.......+++.+ +. .++++++|++|.+++ .
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-----~~---~e~v~~aDVVI~atG~~~ 269 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-----TM---EEAVKEGDIFVTTTGNKD 269 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-----cH---HHHHcCCCEEEECCCCHH
Confidence 356889999999 899999999999999999999998877654443444332 22 356678999998732 3
Q ss_pred HHHHH-HHhC-CCCEEEEecc
Q 024643 174 FISNA-GSLK-GVQHVILLSQ 192 (265)
Q Consensus 174 ~~~~a-a~~~-gv~r~V~iSS 192 (265)
.+... .... .-..++.++.
T Consensus 270 ~i~~~~l~~mk~GgilvnvG~ 290 (413)
T cd00401 270 IITGEHFEQMKDGAIVCNIGH 290 (413)
T ss_pred HHHHHHHhcCCCCcEEEEeCC
Confidence 33322 2222 2246777764
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.017 Score=52.06 Aligned_cols=96 Identities=8% Similarity=0.022 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC---HHHHHHHH--cCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTAL--RGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d---~~~l~~~~--~~~d~vi~~~ 171 (265)
.++.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.....+++.+ .|..+ .....+.. +++|.++.+.
T Consensus 137 ~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~gvdvv~d~~ 215 (325)
T TIGR02825 137 KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVA-FNYKTVKSLEETLKKASPDGYDCYFDNV 215 (325)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeccccccHHHHHHHhCCCCeEEEEECC
Confidence 356799999999999999999888899999999988776654433333222 23222 22222222 3688888763
Q ss_pred c-hHHHHHHHh-CCCCEEEEeccc
Q 024643 172 E-GFISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 172 ~-~~~~~aa~~-~gv~r~V~iSS~ 193 (265)
+ .....+... +.-.++|.++..
T Consensus 216 G~~~~~~~~~~l~~~G~iv~~G~~ 239 (325)
T TIGR02825 216 GGEFSNTVIGQMKKFGRIAICGAI 239 (325)
T ss_pred CHHHHHHHHHHhCcCcEEEEecch
Confidence 3 222333222 234588887754
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0075 Score=56.31 Aligned_cols=36 Identities=17% Similarity=0.386 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
..++|.|.||.|.+|..++..|.+.|++|++.+|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 357899999999999999999999999999999853
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.1 Score=46.49 Aligned_cols=99 Identities=10% Similarity=-0.001 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhhh------cCCccEEee
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAMES------FGTYVESMA 148 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~~------~~~~v~~i~ 148 (265)
......+|+|.|+ |++|.++++.|+..| .++++++.+.- |++.+ ..+.+++..
T Consensus 26 ~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~ 104 (268)
T PRK15116 26 QLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTV 104 (268)
T ss_pred HHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEE
Confidence 3445678999999 899999999999999 68888876531 00000 123333332
Q ss_pred e-CCCCHHHHHHHHc-CCCEEEEcCch-----HHHHHHHhCCCCEEEEeccccc
Q 024643 149 G-DASNKKFLKTALR-GVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 149 ~-D~~d~~~l~~~~~-~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v 195 (265)
. +..+++.+.+.+. ++|.||.+.+. .+.+.|.+.++. +|.+..++.
T Consensus 105 i~~~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip-~I~~gGag~ 157 (268)
T PRK15116 105 VDDFITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIP-LVTTGGAGG 157 (268)
T ss_pred EecccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCC-EEEECCccc
Confidence 2 3335566666664 79999987332 255567777754 555544443
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.032 Score=52.11 Aligned_cols=93 Identities=12% Similarity=0.170 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC-------------------cchhhh------cCCccE--Ee
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAMES------FGTYVE--SM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~-------------------~~~~~~------~~~~v~--~i 147 (265)
.....+|+|.|+ |++|.+++..|+..|. ++++++++. .|++.. ..+.++ .+
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 210 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV 210 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 445678999988 8999999999999995 788888872 222211 123333 34
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEec
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iS 191 (265)
...+ +.+.+.+.++++|.||.+.+. .+.+++.+.++. +|+.+
T Consensus 211 ~~~~-~~~~~~~~~~~~D~Vv~~~d~~~~r~~ln~~~~~~~ip-~i~~~ 257 (376)
T PRK08762 211 QERV-TSDNVEALLQDVDVVVDGADNFPTRYLLNDACVKLGKP-LVYGA 257 (376)
T ss_pred eccC-ChHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence 3334 345677788999999988432 355667777654 44443
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0052 Score=58.55 Aligned_cols=65 Identities=17% Similarity=0.130 Sum_probs=47.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|+||+|.+|..+++.|.+.|++|++++|+++...... ..++.+ ..+ ..+.++++|.||++.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~----~~~---~~e~~~~aDvVIlav 66 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY----AND---NIDAAKDADIVIISV 66 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee----ccC---HHHHhccCCEEEEec
Confidence 58999999999999999999999999999999876543221 112211 112 345577889888773
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.017 Score=52.40 Aligned_cols=96 Identities=9% Similarity=0.094 Sum_probs=67.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS---- 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~---- 171 (265)
.+++++.|+|+.| +|..-++...+.|++|++++++.++-++. ...+.+++..-..|++.+.++.+..|.++++.
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a 258 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLA 258 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeecc
Confidence 3789999999977 99998888888999999999998544443 44567776655568888888887666665442
Q ss_pred chHH---HHHHHhCCCCEEEEeccccc
Q 024643 172 EGFI---SNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 172 ~~~~---~~aa~~~gv~r~V~iSS~~v 195 (265)
...+ ...++.. .++|+++-...
T Consensus 259 ~~~~~~~~~~lk~~--Gt~V~vg~p~~ 283 (360)
T KOG0023|consen 259 EHALEPLLGLLKVN--GTLVLVGLPEK 283 (360)
T ss_pred ccchHHHHHHhhcC--CEEEEEeCcCC
Confidence 1112 2223333 48888886543
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.033 Score=51.67 Aligned_cols=93 Identities=18% Similarity=0.126 Sum_probs=62.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhhh------cCCc--cEEe
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAMES------FGTY--VESM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~~------~~~~--v~~i 147 (265)
.....+|+|.|+ |++|.++++.|+..| -++++++.+.- |++.. ..+. ++.+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~ 103 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS 103 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence 455679999999 899999999999999 47888877641 11100 1233 4444
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEec
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iS 191 (265)
...++ .+...+.++++|+||.+.+. .+.++|.+.++. +|+.+
T Consensus 104 ~~~i~-~~~~~~~~~~~DvVvd~~d~~~~r~~~n~~c~~~~ip-~v~~~ 150 (355)
T PRK05597 104 VRRLT-WSNALDELRDADVILDGSDNFDTRHLASWAAARLGIP-HVWAS 150 (355)
T ss_pred EeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEE
Confidence 44554 45566788999999988433 355667777754 44443
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.014 Score=52.27 Aligned_cols=69 Identities=13% Similarity=0.014 Sum_probs=45.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeee--CC----CCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAG--DA----SNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~--D~----~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|+|.|+ |.+|..++..|.+.|++|++++| .++.+.+...++.+... +. .-..+..+..+.+|.+|++
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vila 75 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILA 75 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEE
Confidence 67999988 99999999999999999999999 55544333222222111 10 0011122344788988877
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.032 Score=47.96 Aligned_cols=97 Identities=8% Similarity=0.135 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC---c---------------chhhh------cCC--ccEEe
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---R---------------NAMES------FGT--YVESM 147 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~---~---------------~~~~~------~~~--~v~~i 147 (265)
......+|+|.|+ |++|..+++.|+..|. ++++++.+. + |++.. ..+ .++.+
T Consensus 24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~ 102 (212)
T PRK08644 24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH 102 (212)
T ss_pred HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 3455678999998 9999999999999995 688888762 1 11110 122 33444
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhC-CCCEEEEecccc
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLK-GVQHVILLSQLS 194 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~-gv~r~V~iSS~~ 194 (265)
...+++ +.+.+.++++|.||.+.+. .+.+.+.+. ++ .+|+.+..+
T Consensus 103 ~~~i~~-~~~~~~~~~~DvVI~a~D~~~~r~~l~~~~~~~~~~-p~I~~~~~~ 153 (212)
T PRK08644 103 NEKIDE-DNIEELFKDCDIVVEAFDNAETKAMLVETVLEHPGK-KLVAASGMA 153 (212)
T ss_pred eeecCH-HHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhCCC-CEEEeehhh
Confidence 444543 5566788999999977332 244555555 54 455554433
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.028 Score=47.96 Aligned_cols=70 Identities=7% Similarity=0.129 Sum_probs=49.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+..+++|+|.|| |.+|...++.|++.|++|++++++... ...+.. ..+.+..-++.. ..+.++|.||.++
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~~~~~~~-----~~l~~adlViaaT 78 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWKQKEFEP-----SDIVDAFLVIAAT 78 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEEecCCCh-----hhcCCceEEEEcC
Confidence 356789999999 999999999999999999999876532 222222 235554443332 3367889888773
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.031 Score=49.99 Aligned_cols=95 Identities=17% Similarity=0.134 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC-HHHHHHHHcCCCEEEEcCch-HH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSEG-FI 175 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d-~~~l~~~~~~~d~vi~~~~~-~~ 175 (265)
.+.+++|+||+|.+|..+++.+...|.+|++++++.++.+.+...++..+ .|..+ .+.+.+. .++|.++.+.+. ..
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~d~v~~~~g~~~~ 239 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYV-IDGSKFSEDVKKL-GGADVVIELVGSPTI 239 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEE-EecHHHHHHHHhc-cCCCEEEECCChHHH
Confidence 46789999999999999999999999999999988766544322222211 12222 1223222 378999977332 22
Q ss_pred HHHHHh-CCCCEEEEecccc
Q 024643 176 SNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 176 ~~aa~~-~gv~r~V~iSS~~ 194 (265)
..+.+. ....++|.++...
T Consensus 240 ~~~~~~~~~~g~~v~~g~~~ 259 (332)
T cd08259 240 EESLRSLNKGGRLVLIGNVT 259 (332)
T ss_pred HHHHHHhhcCCEEEEEcCCC
Confidence 222221 2335788877653
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.05 Score=50.77 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=34.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
.+|+|||||++..+|..+++.|.+.|++|++++.++..
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 46899999999999999999999999999999887643
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0088 Score=56.60 Aligned_cols=71 Identities=13% Similarity=0.148 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|+|.|+ |++|+.++..|...| .++++..|+.+++..+... .. .+.+...+.+.+.+..+|+||++
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-~~--~~~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-FR--NASAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-hc--CCeEecHHHHHHHhccCCEEEEC
Confidence 456789999999 999999999999999 5799999998877655321 10 01223345677889999999988
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.03 Score=53.13 Aligned_cols=89 Identities=12% Similarity=0.016 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--h
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--G 173 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~ 173 (265)
...+++|+|+|. |.||+.+++.|...|.+|+++++++.+.......+.++ .+ +.++++++|++|.+++ .
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~v-----~~---l~eal~~aDVVI~aTG~~~ 279 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFRV-----MT---MEEAAELGDIFVTATGNKD 279 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCEe-----cC---HHHHHhCCCEEEECCCCHH
Confidence 347889999998 99999999999999999999999887654332223332 12 3466789999998732 3
Q ss_pred HHH-HHHHhCCC-CEEEEeccc
Q 024643 174 FIS-NAGSLKGV-QHVILLSQL 193 (265)
Q Consensus 174 ~~~-~aa~~~gv-~r~V~iSS~ 193 (265)
.+. ......+- ..++.++..
T Consensus 280 vI~~~~~~~mK~GailiNvG~~ 301 (425)
T PRK05476 280 VITAEHMEAMKDGAILANIGHF 301 (425)
T ss_pred HHHHHHHhcCCCCCEEEEcCCC
Confidence 332 22233222 355565554
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.05 Score=48.01 Aligned_cols=70 Identities=19% Similarity=0.170 Sum_probs=52.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--cCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR--GVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~ 171 (265)
|+|+|.|||+- |+.+++.|.++|+ |++.+-..-..... ......++.+-+.|.+.+.+.++ +++.||-++
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDAT 74 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDAT 74 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECC
Confidence 78999999874 9999999999998 66544433222222 12457888888889999999994 789999773
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0092 Score=56.46 Aligned_cols=41 Identities=7% Similarity=0.029 Sum_probs=36.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF 140 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~ 140 (265)
.|+|.|.|. |++|..++..|+++||+|+++++++++.+.+.
T Consensus 3 ~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~ 43 (415)
T PRK11064 3 FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTIN 43 (415)
T ss_pred ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 478999988 99999999999999999999999998877653
|
|
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0095 Score=54.56 Aligned_cols=64 Identities=17% Similarity=0.104 Sum_probs=46.1
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEEeCCcchhhhcCCccEEeeeCCCCHH-----------HHHHHHc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMESFGTYVESMAGDASNKK-----------FLKTALR 162 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~-----------~l~~~~~ 162 (265)
+|.|+||+|.+|+.++..|+..+. +++++++++... ..+....|+.|.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------VLEGVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------ccceeEeehhcccchhcCceeccCChHHHhC
Confidence 589999999999999999998652 589998865421 1223344444433 3457889
Q ss_pred CCCEEEEc
Q 024643 163 GVRSIICP 170 (265)
Q Consensus 163 ~~d~vi~~ 170 (265)
++|+||++
T Consensus 75 ~aDiVVit 82 (324)
T TIGR01758 75 DVDVAILV 82 (324)
T ss_pred CCCEEEEc
Confidence 99999987
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.01 Score=53.71 Aligned_cols=35 Identities=6% Similarity=0.110 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
.+|+|.|.|+ |.+|..++..|...||+|++.+|+.
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3578999988 9999999999999999999999975
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.022 Score=53.07 Aligned_cols=70 Identities=11% Similarity=0.116 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
..|+|+|+|+ |..|..++..+.+.|++|++++.++......... ..+..|..|.+.+.++++ ++|.|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad--~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH--RSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh--heEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 4579999997 7899999999999999999999876532211111 346678899999988887 78988854
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0096 Score=56.47 Aligned_cols=68 Identities=22% Similarity=0.177 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|+|+|+ |.+|..+++.|...|+ +|++.+|+.+++..+... +. ++.+.+.+.+.+.++|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG-----EAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-----cEeeHHHHHHHhccCCEEEEC
Confidence 56789999998 9999999999999996 899999998775543211 11 223345667788899999987
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.019 Score=54.42 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=52.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|+|.|+ |.+|..+++.|...| .+|++++|+.+++..+.. -+...+ +.+++.+.+.++|+||.+
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeEe-----eHHHHHHHHhhCCEEEEC
Confidence 456789999998 999999999999999 789999999877554321 111222 335677888899999987
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.033 Score=47.66 Aligned_cols=69 Identities=16% Similarity=0.138 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++|+|.|| |.+|..-++.|++.|++|++++.+... ...+ ...+++++..++.. ..+++++.||.++
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~~~~~-----~dl~~~~lVi~at 77 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLARCFDA-----DILEGAFLVIAAT 77 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeCCCCH-----HHhCCcEEEEECC
Confidence 45789999999 999999999999999999999876542 2222 22378888888763 2367889888773
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.01 Score=53.93 Aligned_cols=68 Identities=19% Similarity=0.127 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|+|.|+ |.+|..+++.|...| .+|++++|+.++...+... +.. ..+.+.+.+.+..+|+||.+
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-----~~~~~~~~~~l~~aDvVi~a 245 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-----AVPLDELLELLNEADVVISA 245 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-----EEeHHHHHHHHhcCCEEEEC
Confidence 46889999998 999999999999876 7899999998765443211 122 22345577778899999988
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.015 Score=47.79 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=71.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch--
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-- 173 (265)
...+++++|+|- |.+|+.+++.|...|.+|++...++-++-+..-.+.++. .+.+++..+|.+|.+++.
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v~--------~~~~a~~~adi~vtaTG~~~ 90 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEVM--------TLEEALRDADIFVTATGNKD 90 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EEE---------HHHHTTT-SEEEE-SSSSS
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEec--------CHHHHHhhCCEEEECCCCcc
Confidence 446789999999 999999999999999999999999976654443444433 256788899999887332
Q ss_pred H-HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc-CCCCCccceEEecc
Q 024643 174 F-ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ-NTPGGKQGFQFEEV 251 (265)
Q Consensus 174 ~-~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~-~~~~~~~~~~~~~g 251 (265)
. -.+-.....-.-|+ .+ .+.+...- . . ..+.+.+++..-+||.... ..|.+.+-+...+|
T Consensus 91 vi~~e~~~~mkdgail-~n-~Gh~d~Ei--------d-------~-~~L~~~~~~~~~v~~~v~~y~l~~G~~i~lLa~G 152 (162)
T PF00670_consen 91 VITGEHFRQMKDGAIL-AN-AGHFDVEI--------D-------V-DALEANAVEREEVRPQVDRYTLPDGRRIILLAEG 152 (162)
T ss_dssp SB-HHHHHHS-TTEEE-EE-SSSSTTSB--------T-------H-HHHHTCTSEEEEEETTEEEEEETTSEEEEEEGGG
T ss_pred ccCHHHHHHhcCCeEE-ec-cCcCceeE--------e-------e-ccccccCcEEEEcCCCeeEEEeCCCCEEEEEECC
Confidence 1 12223333333343 22 22211110 0 1 2355567888899997522 23444444444444
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.059 Score=47.37 Aligned_cols=92 Identities=11% Similarity=0.049 Sum_probs=60.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCCc--cEEe
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGTY--VESM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~~--v~~i 147 (265)
.....+|+|.|+ |++|.++++.|+..| .++++++.+.- |++. + ..+. ++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 455789999999 999999999999999 47887776531 1110 0 1233 3444
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEe
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILL 190 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~i 190 (265)
...++ .+.+.+.++++|.||.+.+. .+.+++.+.++. +|+.
T Consensus 108 ~~~i~-~~~~~~~~~~~DiVi~~~D~~~~r~~ln~~~~~~~ip-~v~~ 153 (245)
T PRK05690 108 NARLD-DDELAALIAGHDLVLDCTDNVATRNQLNRACFAAKKP-LVSG 153 (245)
T ss_pred eccCC-HHHHHHHHhcCCEEEecCCCHHHHHHHHHHHHHhCCE-EEEe
Confidence 44443 45677788999999988432 255666666643 4443
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.021 Score=46.76 Aligned_cols=68 Identities=13% Similarity=0.126 Sum_probs=46.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+..+++|+|.|| |.+|...++.|++.|++|++++.+. .+++.. ..+++..-.+.. .-++++|.||.++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~~--~~~l~~l~~i~~~~~~~~~-----~dl~~a~lViaaT 78 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPEI--CKEMKELPYITWKQKTFSN-----DDIKDAHLIYAAT 78 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCcc--CHHHHhccCcEEEecccCh-----hcCCCceEEEECC
Confidence 456789999999 9999999999999999999985432 222211 234444333322 2357788888773
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.027 Score=51.85 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=28.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~ 133 (265)
++|.|+||+|++|++|++.|..++ .++..+..+.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 479999999999999999998876 6888885543
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.03 Score=50.45 Aligned_cols=105 Identities=16% Similarity=0.145 Sum_probs=69.8
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCH---HHHHHHH-cCCCEEE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNK---KFLKTAL-RGVRSII 168 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~---~~l~~~~-~~~d~vi 168 (265)
.....+.+|+|++|+|-+|+-+.+-..-+|++|+.+.-+++|...+.. .+.. ...|..+. +.|.++. +++|+.|
T Consensus 146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD-~~idyk~~d~~~~L~~a~P~GIDvyf 224 (340)
T COG2130 146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD-AGIDYKAEDFAQALKEACPKGIDVYF 224 (340)
T ss_pred cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc-eeeecCcccHHHHHHHHCCCCeEEEE
Confidence 345567899999999999998777767789999999999888665432 1111 12333332 3344444 6889888
Q ss_pred EcCchHHHHH-HHhCC-CCEEEEecccccccCC
Q 024643 169 CPSEGFISNA-GSLKG-VQHVILLSQLSVYRGS 199 (265)
Q Consensus 169 ~~~~~~~~~a-a~~~g-v~r~V~iSS~~v~~~~ 199 (265)
-+.++-+.++ ....+ -.||+.++-.+.|..+
T Consensus 225 eNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~ 257 (340)
T COG2130 225 ENVGGEVLDAVLPLLNLFARIPVCGAISQYNAP 257 (340)
T ss_pred EcCCchHHHHHHHhhccccceeeeeehhhcCCC
Confidence 6644444444 23322 3589999988888765
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.014 Score=51.51 Aligned_cols=64 Identities=11% Similarity=0.103 Sum_probs=46.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|.|.|+ |.+|..++..|.+.| ++|.+++|+.++.+.+... ++.+ ..+ ..+.+..+|.||++
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~~----~~~---~~~~~~~advVil~ 69 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVRA----ATD---NQEAAQEADVVVLA 69 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCee----cCC---hHHHHhcCCEEEEE
Confidence 578999998 999999999999998 7899999988766544321 2221 122 23446788999877
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.01 Score=49.39 Aligned_cols=67 Identities=16% Similarity=0.017 Sum_probs=47.6
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....+++|.|.|. |.||+++++.|..-|.+|++++|+...........+. ..++.++++.+|+|+++
T Consensus 32 ~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~aDiv~~~ 98 (178)
T PF02826_consen 32 RELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQADIVSLH 98 (178)
T ss_dssp S-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH-SEEEE-
T ss_pred cccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccce--------eeehhhhcchhhhhhhh
Confidence 3456899999998 9999999999999999999999988654311111121 12456788889999865
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.012 Score=52.72 Aligned_cols=72 Identities=7% Similarity=-0.038 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcC---CccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~---~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++++|.|+ |+.|+.++..|.+.|. +|+++.|+.++++.+.. ....... +...+.+...+.++|.||.++
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~~~~~~DiVInaT 198 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLAIEKAAEVLVSTV 198 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhhcccCCCEEEECC
Confidence 34678999998 9999999999999995 79999999888766532 1111111 222234455667899999883
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.011 Score=53.07 Aligned_cols=64 Identities=16% Similarity=0.058 Sum_probs=47.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.|+|.|.|. |.+|..+++.|++.|++|.+.+|++++.+.+...++.. .. +..++++++|.||.+
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~g~~~----~~---~~~e~~~~~d~vi~~ 65 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAAGAET----AS---TAKAVAEQCDVIITM 65 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cC---CHHHHHhcCCEEEEe
Confidence 468999986 99999999999999999999999887665443322221 12 234556788888866
|
|
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.011 Score=54.85 Aligned_cols=71 Identities=14% Similarity=0.229 Sum_probs=62.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhc-CCccEEeeeCCCCHH-HHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF-GTYVESMAGDASNKK-FLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~-~l~~~~~~~d~vi~~ 170 (265)
++.||+.|+ |++-+.++..|.+++ .+|++.+|....++++. +..++.+..|+.|.+ .+++..+..|.++..
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~~~av~ldv~~~~~~L~~~v~~~D~viSL 75 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGINIKAVSLDVADEELALRKEVKPLDLVISL 75 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCCccceEEEccchHHHHHhhhcccceeeee
Confidence 568999998 999999999999887 89999999988877763 466999999999998 899999999999965
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.15 Score=44.47 Aligned_cols=129 Identities=12% Similarity=0.018 Sum_probs=71.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhhh------cCCccE--Ee
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAMES------FGTYVE--SM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~~------~~~~v~--~i 147 (265)
.....+|+|.|. |++|.++++.|+..| .++++++.+.- |++.. ..+.++ .+
T Consensus 8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~ 86 (231)
T cd00755 8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV 86 (231)
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence 345678999999 899999999999999 47888776531 11100 123333 33
Q ss_pred eeCCCCHHHHHHHH-cCCCEEEEcCch-----HHHHHHHhCCCCEEEEecccccccCCCCc--ccccchhHHHHHHHHHH
Q 024643 148 AGDASNKKFLKTAL-RGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSVYRGSGGI--QALMKGNARKLAEQDES 219 (265)
Q Consensus 148 ~~D~~d~~~l~~~~-~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--~~~~~~~~~~~k~~~E~ 219 (265)
...+ +++.+...+ .++|+||.+.+. .+.+.|.+.+++ +|...+.+....+... ........-...+.+..
T Consensus 87 ~~~i-~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip-~I~s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~ 164 (231)
T cd00755 87 EEFL-TPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIP-VISSMGAGGKLDPTRIRVADISKTSGDPLARKVRK 164 (231)
T ss_pred eeec-CHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCC-EEEEeCCcCCCCCCeEEEccEeccccCcHHHHHHH
Confidence 3333 345555666 469999987332 255566777654 4444443332222111 11111111113345667
Q ss_pred HHHhCCCC
Q 024643 220 MLMASGIP 227 (265)
Q Consensus 220 ~l~~~gl~ 227 (265)
.|++.++.
T Consensus 165 ~Lrk~~~~ 172 (231)
T cd00755 165 RLRKRGIF 172 (231)
T ss_pred HHHHcCCC
Confidence 77776654
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.049 Score=52.42 Aligned_cols=68 Identities=13% Similarity=0.106 Sum_probs=48.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC----ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT----YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+|.|.|. |-+|..+++.|+++||+|.+.+|++++.+.+... +..+.. ..+++++.+.++.+|.|+.+
T Consensus 2 ~~IgvIGL-G~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~~~~~~g~~i~~--~~s~~e~v~~l~~~d~Iil~ 73 (470)
T PTZ00142 2 SDIGLIGL-AVMGQNLALNIASRGFKISVYNRTYEKTEEFVKKAKEGNTRVKG--YHTLEELVNSLKKPRKVILL 73 (470)
T ss_pred CEEEEEeE-hHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhhhhcCCccee--cCCHHHHHhcCCCCCEEEEE
Confidence 47899998 9999999999999999999999999886655321 221111 23555554445568877755
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.041 Score=50.12 Aligned_cols=92 Identities=14% Similarity=0.181 Sum_probs=59.7
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCC--ccEEeeeCCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGT--YVESMAGDAS 152 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~--~v~~i~~D~~ 152 (265)
+|+|.|+ |++|.++++.|+..| -++++++.+.- |++. + ..+ .++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899998 999999999999999 57777776531 1110 0 122 3555666776
Q ss_pred CHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecccc
Q 024643 153 NKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 153 d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~ 194 (265)
+.....+.+++.|+|+.+.+. .+.+.+...++. +|..++.+
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn~~ar~~in~~c~~~~ip-~I~~gt~G 125 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDNLAARRHVNKMCLAADVP-LIESGTTG 125 (312)
T ss_pred CccchHHHHhcCCEEEECCCCHHHHHHHHHHHHHCCCC-EEEEecCc
Confidence 644445778999999988332 355566666643 44444433
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.066 Score=44.50 Aligned_cols=69 Identities=10% Similarity=0.134 Sum_probs=48.3
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC---c---------------chhhh------cCCc--cEEeeeCCCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK---R---------------NAMES------FGTY--VESMAGDASN 153 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~---~---------------~~~~~------~~~~--v~~i~~D~~d 153 (265)
+|+|.|+ |++|.++++.|+..|. ++++++.+. + |++.. ..+. ++.+...+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~- 78 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID- 78 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence 5899998 9999999999999996 699888764 1 11110 1223 334444443
Q ss_pred HHHHHHHHcCCCEEEEcC
Q 024643 154 KKFLKTALRGVRSIICPS 171 (265)
Q Consensus 154 ~~~l~~~~~~~d~vi~~~ 171 (265)
.+.+.+.++++|.||.+.
T Consensus 79 ~~~~~~~l~~~DlVi~~~ 96 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAF 96 (174)
T ss_pred hhhHHHHhcCCCEEEECC
Confidence 356778899999999873
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.019 Score=51.19 Aligned_cols=66 Identities=9% Similarity=0.047 Sum_probs=46.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
|+|.|.|. |.+|..++..|.++|++|++++|+++..+.....+.. .....+. +.++++|.||.+.+
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~--~~~~~~~----~~~~~aDlVilavp 66 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV--DEASTDL----SLLKDCDLVILALP 66 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc--ccccCCH----hHhcCCCEEEEcCC
Confidence 57999985 9999999999999999999999988765544322210 0001121 24678999997743
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.049 Score=50.39 Aligned_cols=75 Identities=13% Similarity=0.037 Sum_probs=50.1
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc----CCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~----~~d~vi~~ 170 (265)
...+++.|||.||+|++|+..++-+...|..+++.+++.++.+-...-+. -...|+.+++-++...+ ++|+|+-+
T Consensus 154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA-d~vvdy~~~~~~e~~kk~~~~~~DvVlD~ 232 (347)
T KOG1198|consen 154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA-DEVVDYKDENVVELIKKYTGKGVDVVLDC 232 (347)
T ss_pred ccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC-cEeecCCCHHHHHHHHhhcCCCccEEEEC
Confidence 34567799999999999999999988889444444454444332222222 12357777665555544 69999976
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.051 Score=51.09 Aligned_cols=94 Identities=15% Similarity=0.102 Sum_probs=61.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc-------------------chhh----h--cCCc--cEEe
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAME----S--FGTY--VESM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~-------------------~~~~----~--~~~~--v~~i 147 (265)
.....+|+|.|+ |++|.+++..|+..|. ++++++.+.- |++. + ..+. ++.+
T Consensus 39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 117 (392)
T PRK07878 39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH 117 (392)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence 445678999999 8999999999999994 6777765431 1110 0 1233 3444
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecc
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS 192 (265)
...++ .+...+.++++|.||.+.+. .+.++|...++. +|+.+.
T Consensus 118 ~~~i~-~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p-~v~~~~ 165 (392)
T PRK07878 118 EFRLD-PSNAVELFSQYDLILDGTDNFATRYLVNDAAVLAGKP-YVWGSI 165 (392)
T ss_pred eccCC-hhHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 45554 34567789999999987432 355667777654 554443
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.074 Score=42.36 Aligned_cols=91 Identities=22% Similarity=0.229 Sum_probs=58.4
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC-------------------cchhhh------cCCc--cEEeeeCCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAMES------FGTY--VESMAGDAS 152 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~-------------------~~~~~~------~~~~--v~~i~~D~~ 152 (265)
+|+|.|+ |++|.++++.|+..|. ++++++.+. .|++.+ ..+. ++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899998 9999999999999996 788887652 111110 1223 344444544
Q ss_pred CHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecccc
Q 024643 153 NKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 153 d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~ 194 (265)
+. ...+.+.+.|.||.+.+. .+.+.+++.++. +|..++.+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~~~~~~~l~~~~~~~~i~-~i~~~~~g 124 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDNIAVRRALNRACKELGIP-VIDAGGLG 124 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcCCC
Confidence 33 346778899999988332 255667777653 55555543
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.0064 Score=54.61 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcC------CccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG------TYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~------~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
...++|+|.|+ |+.|++++..|...|. +|++++|+.++++.+.. ..+.+.. . +.+.+.++++|.||.
T Consensus 125 ~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~~~~~aDiVIn 198 (284)
T PRK12549 125 ASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAAALAAADGLVH 198 (284)
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHhhhCCCCEEEE
Confidence 34578999999 8899999999999996 89999999887665421 1122211 1 234456788999998
Q ss_pred cC
Q 024643 170 PS 171 (265)
Q Consensus 170 ~~ 171 (265)
++
T Consensus 199 aT 200 (284)
T PRK12549 199 AT 200 (284)
T ss_pred CC
Confidence 73
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.038 Score=49.73 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCCc--cE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGTY--VE 145 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~~--v~ 145 (265)
.......+|+|.|+ |++|..++..|+..| -++++++.+.- |++. + ..+. ++
T Consensus 22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~ 100 (287)
T PRK08223 22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIR 100 (287)
T ss_pred HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEE
Confidence 34556788999999 899999999999999 57777776531 1110 0 1233 44
Q ss_pred EeeeCCCCHHHHHHHHcCCCEEEEcCch-------HHHHHHHhCCCCEEEEec
Q 024643 146 SMAGDASNKKFLKTALRGVRSIICPSEG-------FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 146 ~i~~D~~d~~~l~~~~~~~d~vi~~~~~-------~~~~aa~~~gv~r~V~iS 191 (265)
.+...++ .+.+.++++++|.|+.+.+. .+.++|...++. +|+.+
T Consensus 101 ~~~~~l~-~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~iP-~V~~~ 151 (287)
T PRK08223 101 AFPEGIG-KENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRGIP-ALTAA 151 (287)
T ss_pred EEecccC-ccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcCCC-EEEEe
Confidence 4444444 44567788999999977432 256677777754 44443
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0084 Score=53.70 Aligned_cols=38 Identities=8% Similarity=0.125 Sum_probs=34.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~ 138 (265)
++|.|.|+ |.+|..++..|+++|++|++++++++..+.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~ 39 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLES 39 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence 57999999 999999999999999999999999876544
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.053 Score=50.57 Aligned_cols=89 Identities=17% Similarity=0.212 Sum_probs=61.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhhh------cCC--ccEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAMES------FGT--YVES 146 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~~------~~~--~v~~ 146 (265)
......+|+|.|+ |++|.+++..|+..| .++++++.+.- |++.. ..+ .++.
T Consensus 37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~ 115 (370)
T PRK05600 37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNA 115 (370)
T ss_pred HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEE
Confidence 3555678999999 899999999999999 48888887631 11110 122 3444
Q ss_pred eeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCC
Q 024643 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQ 185 (265)
Q Consensus 147 i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~ 185 (265)
+...++ .+.+.+.++++|.||.+.+. .+.++|...++.
T Consensus 116 ~~~~i~-~~~~~~~~~~~DlVid~~Dn~~~r~~in~~~~~~~iP 158 (370)
T PRK05600 116 LRERLT-AENAVELLNGVDLVLDGSDSFATKFLVADAAEITGTP 158 (370)
T ss_pred eeeecC-HHHHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 544553 45677889999999988443 355667776654
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.017 Score=55.94 Aligned_cols=71 Identities=11% Similarity=-0.004 Sum_probs=48.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC---------CccEE----eeeCCCCHHHHHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---------TYVES----MAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---------~~v~~----i~~D~~d~~~l~~~~~~~d 165 (265)
-|+|.|.|+ |.+|..++..|+..|++|++.++++++.+.+.. ....- ..+.+.-.+++.++++++|
T Consensus 4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD 82 (495)
T PRK07531 4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGAD 82 (495)
T ss_pred cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCC
Confidence 468999987 999999999999999999999999876543210 00000 0001111124557789999
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
.|+.+
T Consensus 83 ~Viea 87 (495)
T PRK07531 83 WIQES 87 (495)
T ss_pred EEEEc
Confidence 99976
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.013 Score=55.20 Aligned_cols=70 Identities=21% Similarity=0.219 Sum_probs=58.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....++++|.|| |-+|.-++++|.++| .+|+++.|+.+++.++... + .+++...+.+...+..+|+||.+
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~-~---~~~~~~l~el~~~l~~~DvViss 245 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKK-L---GAEAVALEELLEALAEADVVISS 245 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHH-h---CCeeecHHHHHHhhhhCCEEEEe
Confidence 467889999999 999999999999999 7999999999888765321 1 14556677888999999999987
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.031 Score=51.14 Aligned_cols=71 Identities=6% Similarity=-0.074 Sum_probs=48.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----------CCccE--EeeeCCCCHHHHHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----------GTYVE--SMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----------~~~v~--~i~~D~~d~~~l~~~~~~~d 165 (265)
-++|.|.|+ |-+|..++..++..|++|++.+++++..+... ..+.. .....+.-..++.++++++|
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 468999998 99999999999999999999999875433210 01100 00011111124667889999
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
.|+-+
T Consensus 86 lViEa 90 (321)
T PRK07066 86 FIQES 90 (321)
T ss_pred EEEEC
Confidence 99976
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.075 Score=47.79 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=47.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
++|.++|- |-.|..++.+|+++||+|++.+|+++++.+. ...+.+. .++..++.+++|+||.+
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~Ga~~-------a~s~~eaa~~aDvVitm 64 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAAGATV-------AASPAEAAAEADVVITM 64 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHcCCcc-------cCCHHHHHHhCCEEEEe
Confidence 46778876 9999999999999999999999999884333 2223322 22346778899999966
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.079 Score=44.96 Aligned_cols=97 Identities=11% Similarity=0.101 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc-------------------chhh----h--cCCc--cEEe
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAME----S--FGTY--VESM 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~-------------------~~~~----~--~~~~--v~~i 147 (265)
.....+|+|.|+ |++|.++++.|+..|. ++++++.+.- |++. + ..+. ++.+
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~ 96 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD 96 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 345678999998 5699999999999995 6878776531 1110 0 1223 3444
Q ss_pred eeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecccccc
Q 024643 148 AGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSVY 196 (265)
Q Consensus 148 ~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v~ 196 (265)
...+.+ ...+.++++|+||.+.+. .+.+.|.+.++. +|+.++.+.+
T Consensus 97 ~~~~~~--~~~~~~~~~dvVi~~~~~~~~~~~ln~~c~~~~ip-~i~~~~~G~~ 147 (197)
T cd01492 97 TDDISE--KPEEFFSQFDVVVATELSRAELVKINELCRKLGVK-FYATGVHGLF 147 (197)
T ss_pred ecCccc--cHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEEecCCE
Confidence 444432 245667899999987332 256667788764 5666665443
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.052 Score=49.94 Aligned_cols=67 Identities=12% Similarity=0.140 Sum_probs=52.3
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|.|.|+ |.+|+.+++.+.+.|++|++++.++........ -+.+..|+.|.+.+.++.+.+|++...
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~p~~~~a--d~~~~~~~~d~~~i~~~a~~~dvit~e 67 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANSPAVQVA--DHVVLAPFFDPAAIRELAESCDVITFE 67 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCCChhHhC--ceeEeCCCCCHHHHHHHHhhCCEEEeC
Confidence 4889999 799999999999999999999887643322122 134578899999999999999876543
|
Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. |
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.024 Score=51.89 Aligned_cols=92 Identities=12% Similarity=0.050 Sum_probs=54.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcc---hhhhcCCccE-E--eeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVE-S--MAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~---~~~~~~~~v~-~--i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+++|.|.||+|+.|.+|++.|..+. .++..++.+..+ ..... ++.. . .....-|.+.+ ...++|+||++.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~-p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlal 78 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVH-PNLRGLVDLPFQTIDPEKI--ELDECDVVFLAL 78 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhC-cccccccccccccCChhhh--hcccCCEEEEec
Confidence 6799999999999999999999886 576666544422 22112 1111 1 12222233333 456799999883
Q ss_pred c-hHHHH---HHHhCCCCEEEEecccc
Q 024643 172 E-GFISN---AGSLKGVQHVILLSQLS 194 (265)
Q Consensus 172 ~-~~~~~---aa~~~gv~r~V~iSS~~ 194 (265)
+ +.-.+ .....|++ ||=+|...
T Consensus 79 Phg~s~~~v~~l~~~g~~-VIDLSadf 104 (349)
T COG0002 79 PHGVSAELVPELLEAGCK-VIDLSADF 104 (349)
T ss_pred CchhHHHHHHHHHhCCCe-EEECCccc
Confidence 3 22111 22344554 88777653
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.026 Score=54.10 Aligned_cols=66 Identities=15% Similarity=0.075 Sum_probs=50.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|+|+|. |.||+.+++.|...|++|++..+++.+.......+++++ .+.++++.+|+++.+
T Consensus 251 ~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~--------~leell~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV--------TLEDVVETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec--------cHHHHHhcCCEEEEC
Confidence 567899999998 889999999999999999999888765432222233321 245678899999976
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.013 Score=52.76 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=44.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
++|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++. ...+..++++++|+||.+
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g~~-------~~~s~~~~~~~aDvVi~~ 64 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKGAT-------PAASPAQAAAGAEFVITM 64 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcCCc-------ccCCHHHHHhcCCEEEEe
Confidence 47899987 9999999999999999999999998776654322221 111223455666766654
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.027 Score=51.33 Aligned_cols=78 Identities=15% Similarity=0.100 Sum_probs=50.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-H--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F-- 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-~-- 174 (265)
+.+|.|.||||++|.+|++.|.++. .++..+..+..+ |+.+ ....++++|++|++.+. .
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~--------------~~~~---~~~~~~~~DvvFlalp~~~s~ 64 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK--------------DAAA---RRELLNAADVAILCLPDDAAR 64 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC--------------cccC---chhhhcCCCEEEECCCHHHHH
Confidence 5789999999999999999998887 355555544321 1111 22455789999988432 2
Q ss_pred -HHHHHHhCCCCEEEEecccc
Q 024643 175 -ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 175 -~~~aa~~~gv~r~V~iSS~~ 194 (265)
+...+.+.|+ ++|=+|+..
T Consensus 65 ~~~~~~~~~g~-~VIDlSadf 84 (313)
T PRK11863 65 EAVALIDNPAT-RVIDASTAH 84 (313)
T ss_pred HHHHHHHhCCC-EEEECChhh
Confidence 2222234444 577777654
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.005 Score=48.70 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=48.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc-Cch
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~ 173 (265)
...+++|.|.|+ |.+|.+|++.|.+.||+|..+ +|+.+..+..... + .+ .....+.+.++.+|.+|++ .+.
T Consensus 7 ~~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~---~--~~-~~~~~~~~~~~~aDlv~iavpDd 79 (127)
T PF10727_consen 7 QAARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAF---I--GA-GAILDLEEILRDADLVFIAVPDD 79 (127)
T ss_dssp -----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT------TTGGGCC-SEEEE-S-CC
T ss_pred CCCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc---c--cc-ccccccccccccCCEEEEEechH
Confidence 456889999999 999999999999999999876 4655443332210 0 00 1112234567889999987 333
Q ss_pred HHHHHH---HhC----CCCEEEEeccc
Q 024643 174 FISNAG---SLK----GVQHVILLSQL 193 (265)
Q Consensus 174 ~~~~aa---~~~----gv~r~V~iSS~ 193 (265)
.+...+ ... .-+-|+++|..
T Consensus 80 aI~~va~~La~~~~~~~g~iVvHtSGa 106 (127)
T PF10727_consen 80 AIAEVAEQLAQYGAWRPGQIVVHTSGA 106 (127)
T ss_dssp HHHHHHHHHHCC--S-TT-EEEES-SS
T ss_pred HHHHHHHHHHHhccCCCCcEEEECCCC
Confidence 433332 222 12356677654
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.058 Score=48.33 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH-cCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~-~~~d~vi~~~~ 172 (265)
.++.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+...+++.+ .|..+. +.+.+.. .++|.++.+.+
T Consensus 142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAV-FNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEE-EeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 356799999999999999999999999999999988876655433333222 233332 2233222 36888887633
Q ss_pred h-HHHHHHHh-CCCCEEEEeccc
Q 024643 173 G-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 173 ~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
+ ....+... +.-.+++.++..
T Consensus 221 ~~~~~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 221 GEFSSTVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred HHHHHHHHHhhccCCEEEEEcch
Confidence 2 22222221 233588877654
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.01 Score=53.18 Aligned_cols=62 Identities=10% Similarity=-0.018 Sum_probs=46.3
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...+.. ...+..++++++|+||.+
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~-------~~~~~~~~~~~aDivi~~ 62 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAGAV-------TAETARQVTEQADVIFTM 62 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCc-------ccCCHHHHHhcCCEEEEe
Confidence 3778886 9999999999999999999999998776654332221 112344667788888866
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.29 Score=42.65 Aligned_cols=74 Identities=9% Similarity=0.091 Sum_probs=55.8
Q ss_pred CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeCCc---chhhhcC--CccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKR---NAMESFG--TYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~~--~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+|++||+|- ...|+..+++.|.++|.++.....++. +.+++.. ....+++||+++.+++.++++
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g 83 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWG 83 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhC
Confidence 46899999995 457999999999999999988877662 1222211 124578999999988887764
Q ss_pred CCCEEEEc
Q 024643 163 GVRSIICP 170 (265)
Q Consensus 163 ~~d~vi~~ 170 (265)
..|.++|+
T Consensus 84 ~lD~lVHs 91 (259)
T COG0623 84 KLDGLVHS 91 (259)
T ss_pred cccEEEEE
Confidence 57889887
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.052 Score=49.20 Aligned_cols=92 Identities=12% Similarity=0.060 Sum_probs=57.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcC-CccEEeeeCCCC---HHHHHHHH-cCCCEEEEcCc-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG-TYVESMAGDASN---KKFLKTAL-RGVRSIICPSE- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d---~~~l~~~~-~~~d~vi~~~~- 172 (265)
.+|+|+||+|.+|..+++.+...|+ +|+++++++++.+.+.. -+++.+ .|..+ .+.+.+.. .++|.++.+.+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v-i~~~~~~~~~~i~~~~~~gvd~vid~~g~ 234 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA-INYKTDNVAERLRELCPEGVDVYFDNVGG 234 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE-EECCCCCHHHHHHHHCCCCceEEEECCCc
Confidence 7999999999999999998888998 89999988776554321 223222 22222 12333322 46899997632
Q ss_pred hHHHHHHHh-CCCCEEEEecc
Q 024643 173 GFISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 173 ~~~~~aa~~-~gv~r~V~iSS 192 (265)
.....+... ..-.++|.++.
T Consensus 235 ~~~~~~~~~l~~~G~iv~~G~ 255 (345)
T cd08293 235 EISDTVISQMNENSHIILCGQ 255 (345)
T ss_pred HHHHHHHHHhccCCEEEEEee
Confidence 222222221 23457887764
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.015 Score=56.49 Aligned_cols=70 Identities=13% Similarity=0.179 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCC--ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT--YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~--~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...++|+|.|+ |.+|+.+++.|...|+ +|+++.|+.+++..+... ++.+. +...+++.+++.++|+||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~---~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII---YKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE---eecHhhHHHHHhcCCEEEEc
Confidence 55789999999 9999999999999996 799999998876655321 22222 22334566788999999987
|
|
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.028 Score=51.38 Aligned_cols=34 Identities=12% Similarity=0.121 Sum_probs=31.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
+|+|.|.|+ |.+|..++..|.+.|++|++++|+.
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCCcEEEEecHH
Confidence 578999988 9999999999999999999999975
|
|
| >PRK15059 tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.1 Score=47.01 Aligned_cols=62 Identities=10% Similarity=-0.027 Sum_probs=44.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|. |.+|..+++.|++.|++|.+.+|++. .+.+...++.. ..+ ..++.+++|+||.+
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~~v~v~~~~~~-~~~~~~~g~~~----~~s---~~~~~~~advVi~~ 62 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGHQLHVTTIGPV-ADELLSLGAVS----VET---ARQVTEASDIIFIM 62 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEeCCHh-HHHHHHcCCee----cCC---HHHHHhcCCEEEEe
Confidence 46889986 99999999999999999999988764 33332222221 122 34566789999977
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.031 Score=51.58 Aligned_cols=68 Identities=13% Similarity=0.147 Sum_probs=54.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
+++|.|.|+ |.+|+.++..-...|++|++++-+++...... .-..+..+.+|++.++++.+.+|++=.
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~v--a~~~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQV--ADRVIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhc--ccceeecCCCCHHHHHHHHhhCCEEEE
Confidence 478999999 99999999999999999999987765432221 124566788899999999999998753
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.018 Score=43.59 Aligned_cols=64 Identities=11% Similarity=0.186 Sum_probs=46.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++|+|+|+ |.+|..-++.|++.|.+|++++.+.... ...+++..-++ ...+++++.||.++
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~----~~~i~~~~~~~------~~~l~~~~lV~~at 68 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFS----EGLIQLIRREF------EEDLDGADLVFAAT 68 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHH----HTSCEEEESS-------GGGCTTESEEEE-S
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhh----hhHHHHHhhhH------HHHHhhheEEEecC
Confidence 45789999999 9999999999999999999999886111 14456555444 23378899888774
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.07 Score=47.08 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHH--cCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~--~~~d~vi~~~ 171 (265)
..+++++|+|++|.+|..+++.+...|.+|++++++.++.+.+...++.. ..|..+.+ .+.+.. +++|.++.+.
T Consensus 143 ~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 221 (325)
T cd08253 143 KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGADA-VFNYRAEDLADRILAATAGQGVDVIIEVL 221 (325)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEeCCCcCHHHHHHHHcCCCceEEEEECC
Confidence 35689999999999999999999999999999999876655442223322 13333332 333333 3688888763
Q ss_pred chH-HHHHHH-hCCCCEEEEeccc
Q 024643 172 EGF-ISNAGS-LKGVQHVILLSQL 193 (265)
Q Consensus 172 ~~~-~~~aa~-~~gv~r~V~iSS~ 193 (265)
+.. .....+ -....+++.+++.
T Consensus 222 ~~~~~~~~~~~l~~~g~~v~~~~~ 245 (325)
T cd08253 222 ANVNLAKDLDVLAPGGRIVVYGSG 245 (325)
T ss_pred chHHHHHHHHhhCCCCEEEEEeec
Confidence 322 211111 1233578887764
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.04 Score=51.31 Aligned_cols=89 Identities=16% Similarity=0.045 Sum_probs=50.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCe---EEEEEeCCcc--hhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTR---IKALVKDKRN--AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~---V~~~~R~~~~--~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
++|.|.||||++|+++++.|+++ .+. ++.++..... ...+.+. .....+..|.+. +.++|++|++.+.
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~--~~~v~~~~~~~~----~~~~Divf~a~~~ 75 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGK--EGTLQDAFDIDA----LKKLDIIITCQGG 75 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCC--cceEEecCChhH----hcCCCEEEECCCH
Confidence 68999999999999999955554 565 5655443211 1111111 223334444433 4689999988433
Q ss_pred H----HHHHHHhCCCC-EEEEecccc
Q 024643 174 F----ISNAGSLKGVQ-HVILLSQLS 194 (265)
Q Consensus 174 ~----~~~aa~~~gv~-r~V~iSS~~ 194 (265)
- +...+.++|++ .+|=.||..
T Consensus 76 ~~s~~~~~~~~~aG~~~~VID~Ss~f 101 (369)
T PRK06598 76 DYTNEVYPKLRAAGWQGYWIDAASTL 101 (369)
T ss_pred HHHHHHHHHHHhCCCCeEEEECChHH
Confidence 2 22223456764 455555543
|
|
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.0092 Score=56.27 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=35.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
|+|.|.|. |.+|..++..|++.||+|+++++++++.+.+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l 39 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKL 39 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHh
Confidence 57999987 9999999999999999999999998876654
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.074 Score=47.63 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=43.6
Q ss_pred CCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 107 GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 107 atG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|.|.+|..+++.|++.|++|++.+|++++.+.+...++.. . ++..++++++|+||.+
T Consensus 3 GlG~mG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~-----~--~s~~~~~~~advVil~ 59 (288)
T TIGR01692 3 GLGNMGGPMAANLLKAGHPVRVFDLFPDAVEEAVAAGAQA-----A--ASPAEAAEGADRVITM 59 (288)
T ss_pred cccHhHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHcCCee-----c--CCHHHHHhcCCEEEEe
Confidence 4599999999999999999999999988776554333321 1 1345678899999977
|
This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.074 Score=50.17 Aligned_cols=67 Identities=16% Similarity=0.046 Sum_probs=50.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
...+++|+|.|. |.||+.+++.+...|.+|+++.+++.+.......+..++ + +.++++++|++|.++
T Consensus 192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~v~-----~---leeal~~aDVVItaT 258 (406)
T TIGR00936 192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFRVM-----T---MEEAAKIGDIFITAT 258 (406)
T ss_pred CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCEeC-----C---HHHHHhcCCEEEECC
Confidence 356889999998 999999999999999999999988866543333333322 2 234567899999773
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.011 Score=53.69 Aligned_cols=34 Identities=18% Similarity=0.250 Sum_probs=30.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~ 133 (265)
|+|.|+|++|.+|..++..|+..|+ +|++++|+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 6899999999999999999999986 599999954
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.02 Score=47.16 Aligned_cols=72 Identities=11% Similarity=-0.053 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCC-------------------CCHHHHH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-------------------SNKKFLK 158 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~-------------------~d~~~l~ 158 (265)
+..+|+|+|+ |.+|..-++.|...|++|+.++....+...........+..+. .....+.
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 3478999997 9999999999999999999999987665544334444444431 1234566
Q ss_pred HHHcCCCEEEEc
Q 024643 159 TALRGVRSIICP 170 (265)
Q Consensus 159 ~~~~~~d~vi~~ 170 (265)
+.++.+|.+|.+
T Consensus 98 ~~i~~~d~vI~~ 109 (168)
T PF01262_consen 98 EFIAPADIVIGN 109 (168)
T ss_dssp HHHHH-SEEEEH
T ss_pred HHHhhCcEEeee
Confidence 777888988865
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.027 Score=50.93 Aligned_cols=38 Identities=5% Similarity=0.010 Sum_probs=33.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~ 137 (265)
.++|.|.|+ |.+|..++..|+..|++|++++++.+..+
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~ 41 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALE 41 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 468999998 99999999999999999999999886544
|
|
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.022 Score=50.18 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=45.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC----eEEEE-EeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT----RIKAL-VKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~----~V~~~-~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.+.|. |.+|..+++.|++.|+ +|++. .|++++.+.+...++... .+ ..++++++|+||.+
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~g~~~~----~~---~~e~~~~aDvVil~ 68 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSLGVKTA----AS---NTEVVKSSDVIILA 68 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHcCCEEe----CC---hHHHHhcCCEEEEE
Confidence 67999985 9999999999999998 88888 888776654433334321 12 23456678988866
|
|
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.11 Score=47.66 Aligned_cols=94 Identities=16% Similarity=0.056 Sum_probs=57.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe---CCcchhhhcCCccEEeeeCCCCHHHH-HHHHcCCCEEEEcCc-
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---DKRNAMESFGTYVESMAGDASNKKFL-KTALRGVRSIICPSE- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R---~~~~~~~~~~~~v~~i~~D~~d~~~l-~~~~~~~d~vi~~~~- 172 (265)
++.+|+|+|+ |.+|...++.+...|.+|++++| ++++.+....-+++.+ |..+.+.. .....++|.+|-+.+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v--~~~~~~~~~~~~~~~~d~vid~~g~ 248 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYV--NSSKTPVAEVKLVGEFDLIIEATGV 248 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEe--cCCccchhhhhhcCCCCEEEECcCC
Confidence 5678999986 99999999888889999999998 3444443333344433 33221110 122357899997733
Q ss_pred -hHHHHHHHh-CCCCEEEEecccc
Q 024643 173 -GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 173 -~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
..+..+.+. ..-.+++.++...
T Consensus 249 ~~~~~~~~~~l~~~G~~v~~G~~~ 272 (355)
T cd08230 249 PPLAFEALPALAPNGVVILFGVPG 272 (355)
T ss_pred HHHHHHHHHHccCCcEEEEEecCC
Confidence 233333322 1224788777543
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.047 Score=50.60 Aligned_cols=67 Identities=12% Similarity=0.109 Sum_probs=52.5
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
+|+|.|+ |..|..+++.+.+.|++|++++.++........ -+.+..|..|.+.+.++++ ++|.|+..
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~id~v~~~ 69 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA--HRSYVINMLDGDALRAVIEREKPDYIVPE 69 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC--ceEEEcCCCCHHHHHHHHHHhCCCEEEec
Confidence 5899997 999999999999999999999987654322222 1455678899999988887 78988754
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.033 Score=50.03 Aligned_cols=71 Identities=11% Similarity=0.208 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcC---C--ccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG---T--YVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~---~--~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.+++++|.|| |+.|++++-.|++.|. +|+++.|+.++++.+.. . ....+. ..+...+...+..+|.||.++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~~~~~~~~~~~~divINaT 202 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARGIEDVIAAADGVVNAT 202 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecCHhHHHHHHhhcCEEEEcC
Confidence 4678999999 9999999999999995 79999999887765521 1 111111 122223334456789999773
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.12 Score=45.98 Aligned_cols=98 Identities=12% Similarity=0.082 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHH---HHH--cCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK---TAL--RGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~---~~~--~~~d~vi~~~ 171 (265)
..+.+++|+|+++.+|..+++.+...|++|++++++.++...+...+... ..|..+.+... +.. .++|.++.+.
T Consensus 165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 243 (342)
T cd08266 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADY-VIDYRKEDFVREVRELTGKRGVDVVVEHV 243 (342)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCe-EEecCChHHHHHHHHHhCCCCCcEEEECC
Confidence 34678999999999999999999999999999998876554332222221 23444443333 222 2578888773
Q ss_pred ch-HHHHHHHh-CCCCEEEEeccccc
Q 024643 172 EG-FISNAGSL-KGVQHVILLSQLSV 195 (265)
Q Consensus 172 ~~-~~~~aa~~-~gv~r~V~iSS~~v 195 (265)
+. ....+.+. ..-.+++.+++...
T Consensus 244 g~~~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 244 GAATWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred cHHHHHHHHHHhhcCCEEEEEecCCC
Confidence 32 22222111 12258998886644
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.093 Score=48.17 Aligned_cols=96 Identities=13% Similarity=0.055 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCC---CH-HHHHHHH-cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDAS---NK-KFLKTAL-RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~---d~-~~l~~~~-~~~d~vi~~ 170 (265)
.++.+|+|+||+|.+|..+++.+...|.+|++++++.++.+.+. ..+++.+ .|.. +. +.+.+.. .++|.+|.+
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v-i~~~~~~~~~~~i~~~~~~gvD~v~d~ 235 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA-FNYKEEPDLDAALKRYFPEGIDIYFDN 235 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE-EECCCcccHHHHHHHHCCCCcEEEEEC
Confidence 35679999999999999999988889999999988877655432 2233222 2332 22 2233222 368999977
Q ss_pred Cch-HHHHHHHh-CCCCEEEEeccc
Q 024643 171 SEG-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 171 ~~~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
.++ ....+... ..-.+++.++..
T Consensus 236 vG~~~~~~~~~~l~~~G~iv~~G~~ 260 (348)
T PLN03154 236 VGGDMLDAALLNMKIHGRIAVCGMV 260 (348)
T ss_pred CCHHHHHHHHHHhccCCEEEEECcc
Confidence 432 22222221 223578877654
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.038 Score=52.91 Aligned_cols=87 Identities=10% Similarity=0.088 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--hH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--GF 174 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~~ 174 (265)
..+++|+|+|. |.||+.+++.+...|++|+++.+++.+.......+..++ + +.++++.+|++|.+++ ..
T Consensus 252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-----~---leEal~~ADVVI~tTGt~~v 322 (477)
T PLN02494 252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-----T---LEDVVSEADIFVTTTGNKDI 322 (477)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-----c---HHHHHhhCCEEEECCCCccc
Confidence 56789999999 899999999999999999999998865433322333322 2 3456788999998733 22
Q ss_pred H-HHHHHhCCC-CEEEEecc
Q 024643 175 I-SNAGSLKGV-QHVILLSQ 192 (265)
Q Consensus 175 ~-~~aa~~~gv-~r~V~iSS 192 (265)
+ .......+- ..++.++.
T Consensus 323 I~~e~L~~MK~GAiLiNvGr 342 (477)
T PLN02494 323 IMVDHMRKMKNNAIVCNIGH 342 (477)
T ss_pred hHHHHHhcCCCCCEEEEcCC
Confidence 2 223333222 35666654
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.082 Score=50.11 Aligned_cols=67 Identities=13% Similarity=0.030 Sum_probs=45.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch----hhhcCCccEEeeeCCCCHHHHHHHHc-CCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALR-GVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~~~~v~~i~~D~~d~~~l~~~~~-~~d~vi~~ 170 (265)
.+++|+|||+++ +|...++.|++.|++|++.+++.... ..+...++++..++. ...+ +. ++|.||..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~---~~~~~d~vV~s 75 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLEL---LDEDFDLMVKN 75 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHHH---hcCcCCEEEEC
Confidence 467899999966 99999999999999999998765321 223333555554432 2221 23 48888765
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.021 Score=45.70 Aligned_cols=65 Identities=9% Similarity=0.029 Sum_probs=44.5
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEe----------eeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM----------AGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i----------~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|+ |.||..++..|.+.|++|.+++|.. ..+.+...++.+. .....+. ....+.+|.+|++.
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~D~viv~v 75 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP---SADAGPYDLVIVAV 75 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH---GHHHSTESEEEE-S
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc---hhccCCCcEEEEEe
Confidence 689998 8999999999999999999999988 5444322222211 1222333 34567899999873
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.025 Score=51.35 Aligned_cols=36 Identities=11% Similarity=0.078 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
..|+|+|.|+ |.||..++..|.+.|++|+++.|+..
T Consensus 4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~~ 39 (313)
T PRK06249 4 ETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSDY 39 (313)
T ss_pred cCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4578999988 99999999999999999999999863
|
|
| >PLN02928 oxidoreductase family protein | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.035 Score=51.37 Aligned_cols=74 Identities=9% Similarity=0.009 Sum_probs=51.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...++++.|.|. |.||+.+++.|...|++|++++|+..+.... ....+..+........++.++++.+|+|+++
T Consensus 156 ~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~ 233 (347)
T PLN02928 156 TLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLC 233 (347)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEEC
Confidence 466899999999 9999999999999999999998874321110 0011111111111345688999999999966
|
|
| >PLN02350 phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.1 Score=50.49 Aligned_cols=70 Identities=13% Similarity=0.071 Sum_probs=50.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC----ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT----YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~----~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.++|.+.|= |-+|..+++.|+++|++|.+.+|+.++.+.+... +...+. -..+++++.+.++.+|+||.+
T Consensus 6 ~~~IG~IGL-G~MG~~mA~nL~~~G~~V~V~NRt~~k~~~l~~~~~~~Ga~~~~-~a~s~~e~v~~l~~~dvIi~~ 79 (493)
T PLN02350 6 LSRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLY-GFKDPEDFVLSIQKPRSVIIL 79 (493)
T ss_pred CCCEEEEee-HHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHhhhhcCCcccc-cCCCHHHHHhcCCCCCEEEEE
Confidence 457999987 9999999999999999999999999887655321 221110 123555555556679999966
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.027 Score=50.41 Aligned_cols=38 Identities=8% Similarity=0.051 Sum_probs=33.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~ 137 (265)
.++|.|.|+ |.+|..++..|+..|++|++++++++..+
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~ 40 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALE 40 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHH
Confidence 368999998 99999999999999999999999876543
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.026 Score=50.65 Aligned_cols=39 Identities=10% Similarity=0.018 Sum_probs=34.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~ 138 (265)
.++|.|.|+ |.+|..++..|+..|++|++++++++..+.
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 358999999 999999999999999999999999876543
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.054 Score=46.10 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=26.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIK 127 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~ 127 (265)
|+|.|.||+|.+|+.+++.|.+.|+.|.
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 5899999999999999999999999986
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.043 Score=50.00 Aligned_cols=65 Identities=15% Similarity=0.140 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|- |.||+.+++.|...|++|++.+|..+... ++..+ ...+++.++++++|+|+++
T Consensus 133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~----~~~~~l~e~l~~aDvvv~~ 197 (312)
T PRK15469 133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSF----AGREELSAFLSQTRVLINL 197 (312)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceee----cccccHHHHHhcCCEEEEC
Confidence 345789999998 99999999999999999999988654321 12211 1345688999999999976
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.59 E-value=0.074 Score=47.89 Aligned_cols=74 Identities=8% Similarity=0.064 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc---chhhhc---CCc--cEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR---NAMESF---GTY--VESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~---~~~~~~---~~~--v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
..+++++|.|+ |+.+++++-.|+..|. +|+++.|+.+ +++.+. +.. ..+...++.+.+.+.+.+.++|.|
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDiv 200 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 200 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEE
Confidence 35678999998 7779999999999995 8999999853 544331 111 111122333333355567788999
Q ss_pred EEcC
Q 024643 168 ICPS 171 (265)
Q Consensus 168 i~~~ 171 (265)
|.++
T Consensus 201 INaT 204 (288)
T PRK12749 201 TNGT 204 (288)
T ss_pred EECC
Confidence 9873
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.13 Score=45.05 Aligned_cols=91 Identities=13% Similarity=0.108 Sum_probs=57.4
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCC--ccEEeeeCCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGT--YVESMAGDAS 152 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~--~v~~i~~D~~ 152 (265)
+|+|.|+ |++|.++++.|+..| -++++++.+.- |++. + ..+ .++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899997 899999999999999 47777776531 1110 0 112 3455666665
Q ss_pred CHHHH-HHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEeccc
Q 024643 153 NKKFL-KTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 153 d~~~l-~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~ 193 (265)
+.+.. ...++++|.|+.+.+. .+.+.+...++ .+|..++.
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~Dn~~aR~~ln~~c~~~~i-plI~~g~~ 125 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALDNIIARRYVNGMLIFLIV-PLIESGTE 125 (234)
T ss_pred hhhhchHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCC-CEEEEccc
Confidence 43332 4678999999988332 35555666654 34444443
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.11 Score=48.87 Aligned_cols=89 Identities=15% Similarity=0.108 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCC--ccEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGT--YVES 146 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~--~v~~ 146 (265)
......+|+|.|+ |++|.++++.|+..| -++++++.+.- |++. + ..+ .++.
T Consensus 34 ~~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~ 112 (390)
T PRK07411 34 KRLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDL 112 (390)
T ss_pred HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEE
Confidence 3555679999999 899999999999999 47777766431 1110 0 123 3444
Q ss_pred eeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCC
Q 024643 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQ 185 (265)
Q Consensus 147 i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~ 185 (265)
+...++ .+...+.+.++|+||.+.+. .+.++|...++.
T Consensus 113 ~~~~~~-~~~~~~~~~~~D~Vvd~~d~~~~r~~ln~~~~~~~~p 155 (390)
T PRK07411 113 YETRLS-SENALDILAPYDVVVDGTDNFPTRYLVNDACVLLNKP 155 (390)
T ss_pred EecccC-HHhHHHHHhCCCEEEECCCCHHHHHHHHHHHHHcCCC
Confidence 544444 34566788999999988443 255666666643
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.12 Score=47.71 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCCe---EEEEEeCCcchhh--hcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTR---IKALVKDKRNAME--SFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~---V~~~~R~~~~~~~--~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+.++|.|.||||++|+++++.|.. ..++ +..+....+.-+. +.+..+. .-++ |++ .+.++|.+|++.
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~--v~~~-~~~----~~~~~Divf~a~ 76 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREII--IQEA-KIN----SFEGVDIAFFSA 76 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceE--EEeC-CHH----HhcCCCEEEECC
Confidence 347899999999999999999995 5666 5555443322111 1122222 2222 333 246899999874
Q ss_pred ch-H---HHHHHHhCCCCEEEEeccccc
Q 024643 172 EG-F---ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 172 ~~-~---~~~aa~~~gv~r~V~iSS~~v 195 (265)
+. . +...+.++| ..+|=.|+..-
T Consensus 77 ~~~~s~~~~~~~~~~G-~~VID~Ss~fR 103 (347)
T PRK06728 77 GGEVSRQFVNQAVSSG-AIVIDNTSEYR 103 (347)
T ss_pred ChHHHHHHHHHHHHCC-CEEEECchhhc
Confidence 32 2 222233445 35565665543
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.035 Score=50.52 Aligned_cols=37 Identities=8% Similarity=0.187 Sum_probs=33.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~ 137 (265)
|+|.|.|| |.+|..++..|.+.|++|.++.|+++..+
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~~~~ 37 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNHTTFE 37 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 57999999 99999999999999999999999875544
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.034 Score=49.98 Aligned_cols=43 Identities=19% Similarity=0.260 Sum_probs=37.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhh
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES 139 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~ 139 (265)
...+++++|.|| |+.+++++..|++.| .+|+++.|+.++++++
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~L 166 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEEL 166 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 335789999999 899999999999999 6899999999887765
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.093 Score=53.04 Aligned_cols=94 Identities=14% Similarity=0.217 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCc------------------chhhh------cCC--ccEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKR------------------NAMES------FGT--YVES 146 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~------------------~~~~~------~~~--~v~~ 146 (265)
....+.+|+|.|+ | +|..++..|+..|. ++++++.+.- |++.. ..+ .++.
T Consensus 103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~ 180 (722)
T PRK07877 103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV 180 (722)
T ss_pred HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence 4566789999999 7 99999999999994 8888876531 11100 122 3555
Q ss_pred eeeCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEecc
Q 024643 147 MAGDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 147 i~~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS 192 (265)
+...++ .+.+.++++++|.|+.+.+. .+.++|.+.++. +|+-++
T Consensus 181 ~~~~i~-~~n~~~~l~~~DlVvD~~D~~~~R~~ln~~a~~~~iP-~i~~~~ 229 (722)
T PRK07877 181 FTDGLT-EDNVDAFLDGLDVVVEECDSLDVKVLLREAARARRIP-VLMATS 229 (722)
T ss_pred EeccCC-HHHHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEcC
Confidence 555554 67889999999999988443 355667777765 444443
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.098 Score=47.69 Aligned_cols=65 Identities=9% Similarity=0.152 Sum_probs=46.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhh----c-----CCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES----F-----GTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~----~-----~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
.++||.|+|+ |.+|..++..|+..|. ++.+++++.+++... . ...+.+.. .+. +.++++|+
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~----~~~~~adi 76 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY----SDCKDADL 76 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH----HHhCCCCE
Confidence 4579999998 9999999999999985 899999987654322 1 11222221 232 34789999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
||.+
T Consensus 77 vIit 80 (315)
T PRK00066 77 VVIT 80 (315)
T ss_pred EEEe
Confidence 9976
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.054 Score=49.51 Aligned_cols=68 Identities=12% Similarity=-0.016 Sum_probs=49.8
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.....+++|.|.|- |.+|+.+++.|...|++|++..|.....+.....+++. .++.++++.+|+|++.
T Consensus 11 ~~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaak~ADVV~ll 78 (335)
T PRK13403 11 VELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEV--------MSVSEAVRTAQVVQML 78 (335)
T ss_pred hhhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEE--------CCHHHHHhcCCEEEEe
Confidence 34567899999998 99999999999999999999877533222112223322 1477888999999865
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.099 Score=40.42 Aligned_cols=92 Identities=14% Similarity=0.103 Sum_probs=50.9
Q ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEE-EeCCcchhhh--cCCccE-EeeeCCCCHHHHHHHHcCCCEEEEcC-chH
Q 024643 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAMES--FGTYVE-SMAGDASNKKFLKTALRGVRSIICPS-EGF 174 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~-~R~~~~~~~~--~~~~v~-~i~~D~~d~~~l~~~~~~~d~vi~~~-~~~ 174 (265)
++.|+|++|.+|..+++.|... ++++.++ +|+.++.... ..+.+. .+..++ +.+.+. ..++|+||.+. +..
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~~~~ 77 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALPHGV 77 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCCcHH
Confidence 4789999999999999999994 7888888 4433222111 122221 111222 222222 25889999873 332
Q ss_pred HHH----HHHh-CCCCEEEEeccccc
Q 024643 175 ISN----AGSL-KGVQHVILLSQLSV 195 (265)
Q Consensus 175 ~~~----aa~~-~gv~r~V~iSS~~v 195 (265)
... .... ..-+.+|-+||..-
T Consensus 78 ~~~~~~~~~~~~~~g~~viD~s~~~~ 103 (122)
T smart00859 78 SKEIAPLLPKAAEAGVKVIDLSSAFR 103 (122)
T ss_pred HHHHHHHHHhhhcCCCEEEECCcccc
Confidence 222 2221 12246677776544
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.046 Score=51.24 Aligned_cols=67 Identities=7% Similarity=-0.025 Sum_probs=48.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|...|++|++.+|.....+.....+++ -..++.++++.+|+|+++
T Consensus 189 ~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~-------~~~~l~ell~~aDvV~l~ 255 (385)
T PRK07574 189 DLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLT-------YHVSFDSLVSVCDVVTIH 255 (385)
T ss_pred ecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCce-------ecCCHHHHhhcCCEEEEc
Confidence 467889999998 9999999999999999999999876322111111121 123467788999998865
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.04 Score=49.84 Aligned_cols=55 Identities=9% Similarity=0.105 Sum_probs=45.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+..+++|+|.|.+|.+|+.++..|+++|+.|++..|... ++.+..+.+|+||.+
T Consensus 155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~---------------------~l~e~~~~ADIVIsa 209 (301)
T PRK14194 155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST---------------------DAKALCRQADIVVAA 209 (301)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC---------------------CHHHHHhcCCEEEEe
Confidence 4677899999999999999999999999999999865432 255566777888766
|
|
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.042 Score=39.27 Aligned_cols=34 Identities=21% Similarity=0.227 Sum_probs=31.0
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
+|+|.|| |++|-+++..|.+.|.+|+++.|++.-
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5789998 999999999999999999999998753
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.043 Score=50.40 Aligned_cols=63 Identities=14% Similarity=0.097 Sum_probs=48.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|...|++|++.+|+...... .++ . ..++.++++.+|+|+++
T Consensus 143 ~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~----~~~-----~--~~~l~ell~~aDiVil~ 205 (330)
T PRK12480 143 PVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLD----FLT-----Y--KDSVKEAIKDADIISLH 205 (330)
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhh----hhh-----c--cCCHHHHHhcCCEEEEe
Confidence 456789999998 999999999999999999999988653211 011 1 12467889999999866
|
|
| >COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.07 Score=48.50 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=33.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
|+|+|.|+ |.+|..++-.|.+.|+.|..+.|++. .+.+
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~~V~~~~R~~~-~~~l 38 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGHDVTLLVRSRR-LEAL 38 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCCeEEEEecHHH-HHHH
Confidence 68999999 99999999999999999999999875 3433
|
|
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.026 Score=43.80 Aligned_cols=81 Identities=12% Similarity=0.104 Sum_probs=46.3
Q ss_pred CEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-hH-
Q 024643 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-GF- 174 (265)
Q Consensus 100 ~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-~~- 174 (265)
++|+|.|+| +..|..+++.|.+.|++|+.+.-..... . +... ..++.+.-..+|.++++.+ ..
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i---~--G~~~-------y~sl~e~p~~iDlavv~~~~~~~ 68 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEI---L--GIKC-------YPSLAEIPEPIDLAVVCVPPDKV 68 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEE---T--TEE--------BSSGGGCSST-SEEEE-S-HHHH
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEE---C--cEEe-------eccccCCCCCCCEEEEEcCHHHH
Confidence 479999988 6689999999999999999885443221 1 1111 1122221356788887632 22
Q ss_pred --HHHHHHhCCCCEEEEecc
Q 024643 175 --ISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 175 --~~~aa~~~gv~r~V~iSS 192 (265)
+.+.+.+.|++.+++.++
T Consensus 69 ~~~v~~~~~~g~~~v~~~~g 88 (116)
T PF13380_consen 69 PEIVDEAAALGVKAVWLQPG 88 (116)
T ss_dssp HHHHHHHHHHT-SEEEE-TT
T ss_pred HHHHHHHHHcCCCEEEEEcc
Confidence 333456678999999887
|
|
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.14 Score=46.44 Aligned_cols=31 Identities=16% Similarity=0.126 Sum_probs=26.0
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD 132 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~ 132 (265)
+|+|.|+ |++|.++++.|+..| -++++++.+
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D 32 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG 32 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 5899999 899999999999999 467666643
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.029 Score=54.05 Aligned_cols=71 Identities=3% Similarity=-0.048 Sum_probs=49.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhhcCCccEEeeeCCCC------------HHHHHHHHcCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASN------------KKFLKTALRGV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d------------~~~l~~~~~~~ 164 (265)
+|+|.|.|. |++|..++..|++.| ++|++++.++++.+.+......+.+-++.+ ..++.++++++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a 79 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA 79 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence 478999987 999999999999985 889999999988776543332222111111 11234567889
Q ss_pred CEEEEc
Q 024643 165 RSIICP 170 (265)
Q Consensus 165 d~vi~~ 170 (265)
|++|.+
T Consensus 80 dvi~I~ 85 (473)
T PLN02353 80 DIVFVS 85 (473)
T ss_pred CEEEEE
Confidence 999866
|
|
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.18 Score=44.85 Aligned_cols=96 Identities=16% Similarity=0.117 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH--cCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~--~~~d~vi~~~ 171 (265)
.++.+++|+|++|.+|..+++.+...|.+|++++++.++.+.+...++.. ..|..+. +.+.+.. +++|.++.+.
T Consensus 141 ~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl~~~ 219 (324)
T cd08244 141 TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADV-AVDYTRPDWPDQVREALGGGGVTVVLDGV 219 (324)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEecCCccHHHHHHHHcCCCCceEEEECC
Confidence 34678999999999999999999999999999998876655432222322 1233333 2333333 3589999773
Q ss_pred ch-HHHHHHHh-CCCCEEEEeccc
Q 024643 172 EG-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 172 ~~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
.+ ....+.+. ....++|.++..
T Consensus 220 g~~~~~~~~~~l~~~g~~v~~g~~ 243 (324)
T cd08244 220 GGAIGRAALALLAPGGRFLTYGWA 243 (324)
T ss_pred ChHhHHHHHHHhccCcEEEEEecC
Confidence 22 22222221 234588887654
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.078 Score=51.48 Aligned_cols=95 Identities=15% Similarity=0.042 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH-------------H---H----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-------------K---F---- 156 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~-------------~---~---- 156 (265)
.++.+|+|+|+ |-+|...+..+...|.+|+++++++++.+....-+.+++..|..+. + .
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 35789999999 9999999999999999999999998877655444555554443221 1 1
Q ss_pred HHHHHcCCCEEEEcC-------chHH-HHHHHhCC-CCEEEEecc
Q 024643 157 LKTALRGVRSIICPS-------EGFI-SNAGSLKG-VQHVILLSQ 192 (265)
Q Consensus 157 l~~~~~~~d~vi~~~-------~~~~-~~aa~~~g-v~r~V~iSS 192 (265)
+.+..+++|++|.+. +..+ .++.+..+ -..+|.++.
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~ 286 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAA 286 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEcc
Confidence 122235799999772 1233 44433322 246777775
|
|
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.2 Score=44.88 Aligned_cols=97 Identities=14% Similarity=0.142 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH-cCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~-~~~d~vi~~~~ 172 (265)
.++.+++|.|++|.+|..+++.+...|.+|++++++.++.+.+...++..+ .+..+. +.+.... +++|.++.+.+
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~~~~vd~v~~~~g 216 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRP-INYKTEDLGEVLKKEYPKGVDVVYESVG 216 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceE-EeCCCccHHHHHHHhcCCCCeEEEECCc
Confidence 456789999999999999999999999999999988766544322222221 222222 1222221 46888887733
Q ss_pred h-HHHHHHHh-CCCCEEEEecccc
Q 024643 173 G-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 173 ~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
. ....+.+. ....++|.+++..
T Consensus 217 ~~~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 217 GEMFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred HHHHHHHHHHhccCCeEEEEeccc
Confidence 3 22233222 2345888887654
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.073 Score=47.89 Aligned_cols=55 Identities=18% Similarity=0.191 Sum_probs=46.6
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
-...+++|+|+|+++.+|+.++..|..+|..|+++.+.. ..+.+.++.+|+||.+
T Consensus 154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t---------------------~~l~~~~~~ADIVIsA 208 (286)
T PRK14175 154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS---------------------KDMASYLKDADVIVSA 208 (286)
T ss_pred CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHhhCCEEEEC
Confidence 367789999999999999999999999999999886532 2466788899999987
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.062 Score=48.55 Aligned_cols=68 Identities=12% Similarity=0.035 Sum_probs=46.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
.++|.|.|+ |.+|..++..|.+.|+ +|++++|+++..+.....++.... ..+ ..+.++++|+||.+.+
T Consensus 6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~--~~~---~~~~~~~aDvViiavp 75 (307)
T PRK07502 6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRV--TTS---AAEAVKGADLVILCVP 75 (307)
T ss_pred CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCcee--cCC---HHHHhcCCCEEEECCC
Confidence 468999995 9999999999999984 899999987665443222211000 112 3455678999998743
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.12 Score=49.67 Aligned_cols=67 Identities=10% Similarity=-0.033 Sum_probs=47.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-c----hhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-N----AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~----~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|+|.|+ |++|.++++.|.++|++|++++++.. . ...+...+++++.++-.. ...++|.||..
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------~~~~~D~Vv~s 85 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------LPEDTDLVVTS 85 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------ccCCCCEEEEC
Confidence 34678999998 89999999999999999999986542 1 122334467776554322 23568888865
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.084 Score=47.04 Aligned_cols=64 Identities=14% Similarity=0.127 Sum_probs=45.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeCCc-chhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKR-NAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G----~~V~~~~R~~~-~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.|+|.|.|+ |.+|..+++.|++.| ++|++.+|+.+ +.+.+.. .+++.. .+ ..++++.+|+||++
T Consensus 3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~g~~~~----~~---~~e~~~~aDvVila 72 (279)
T PRK07679 3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKYGVKGT----HN---KKELLTDANILFLA 72 (279)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhcCceEe----CC---HHHHHhcCCEEEEE
Confidence 478999996 999999999999998 78999988763 4443322 133321 22 23456788999977
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.064 Score=48.76 Aligned_cols=77 Identities=14% Similarity=0.082 Sum_probs=48.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-H---
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F--- 174 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-~--- 174 (265)
.+|.|.||+|+.|.+|++.|.... .++..+.-+.. .+..+ ..++++++|++|++.+. .
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~--------------~~~~~---~~~~~~~~D~vFlalp~~~s~~ 64 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR--------------KDAAE---RAKLLNAADVAILCLPDDAARE 64 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc--------------cCcCC---HhHhhcCCCEEEECCCHHHHHH
Confidence 479999999999999999999876 45655543321 11112 33556789999988432 2
Q ss_pred HHHHHHhCCCCEEEEecccc
Q 024643 175 ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 175 ~~~aa~~~gv~r~V~iSS~~ 194 (265)
+...+.+.|+ ++|=+|+..
T Consensus 65 ~~~~~~~~g~-~VIDlSadf 83 (310)
T TIGR01851 65 AVSLVDNPNT-CIIDASTAY 83 (310)
T ss_pred HHHHHHhCCC-EEEECChHH
Confidence 1222233444 577777654
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.078 Score=48.01 Aligned_cols=63 Identities=11% Similarity=0.165 Sum_probs=45.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhhc----------CCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF----------GTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~----------~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
++|.|.|+ |.+|+.++..|+..| ++|++++|+.++++... +..+.+.. .+. +.++++|++
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~----~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDY----SDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCH----HHhCCCCEE
Confidence 47999997 999999999999999 68999999887654331 11222221 232 246899999
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
|.+
T Consensus 73 Iit 75 (306)
T cd05291 73 VIT 75 (306)
T ss_pred EEc
Confidence 987
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.066 Score=50.29 Aligned_cols=39 Identities=10% Similarity=-0.032 Sum_probs=32.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF 140 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~ 140 (265)
|+|.|.|. |++|..++..|+ .||+|+++++++++.+.+.
T Consensus 1 mkI~VIGl-GyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~ 39 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLIA-QNHEVVALDILPSRVAMLN 39 (388)
T ss_pred CEEEEECC-CHHHHHHHHHHH-hCCcEEEEECCHHHHHHHH
Confidence 57899977 999999996665 5999999999998876553
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.14 Score=47.24 Aligned_cols=90 Identities=16% Similarity=0.124 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhh-c-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-F-GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~-~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
.+++|.|.||||++|.++++.|.++. .++..+..+.+.-..+ + +..+++- |+ +. ..+.++|++|++.+
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~~~~~~v~--~~---~~--~~~~~~Dvvf~a~p 75 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFGGKSVTVQ--DA---AE--FDWSQAQLAFFVAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEECCcceEEE--eC---ch--hhccCCCEEEECCC
Confidence 46799999999999999999999854 4666665443221111 1 1111111 22 11 23468999998843
Q ss_pred h-H---HHHHHHhCCCCEEEEeccccc
Q 024643 173 G-F---ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 173 ~-~---~~~aa~~~gv~r~V~iSS~~v 195 (265)
. . +...+.++|+ ++|=.|+..-
T Consensus 76 ~~~s~~~~~~~~~~g~-~VIDlS~~fR 101 (336)
T PRK08040 76 REASAAYAEEATNAGC-LVIDSSGLFA 101 (336)
T ss_pred HHHHHHHHHHHHHCCC-EEEECChHhc
Confidence 2 2 1222234454 5776676543
|
|
| >cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.08 Score=42.57 Aligned_cols=54 Identities=11% Similarity=0.059 Sum_probs=45.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+..+++|+|.|.+.-+|+.++..|.++|..|+...++.. ++++.++.+|+++.+
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~---------------------~l~~~v~~ADIVvsA 78 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI---------------------QLQSKVHDADVVVVG 78 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc---------------------CHHHHHhhCCEEEEe
Confidence 456899999999999999999999999999988764321 355678899999987
|
NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.17 Score=43.44 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH----HcCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA----LRGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~----~~~~d~vi~~~~ 172 (265)
.++.+|+|+|+++ +|+.+++.+...|.+|+++++++++.+.+...+... ..|..+.+..... -+++|.++.+.+
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~~ 210 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGADH-VIDYKEEDLEEELRLTGGGGADVVIDAVG 210 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCce-eccCCcCCHHHHHHHhcCCCCCEEEECCC
Confidence 4567999999988 999999999999999999999876544332222211 1233332222221 246899997733
Q ss_pred h--HHHHHHHh-CCCCEEEEeccccc
Q 024643 173 G--FISNAGSL-KGVQHVILLSQLSV 195 (265)
Q Consensus 173 ~--~~~~aa~~-~gv~r~V~iSS~~v 195 (265)
. ....+.+. ..-.+++.++....
T Consensus 211 ~~~~~~~~~~~l~~~G~~v~~~~~~~ 236 (271)
T cd05188 211 GPETLAQALRLLRPGGRIVVVGGTSG 236 (271)
T ss_pred CHHHHHHHHHhcccCCEEEEEccCCC
Confidence 2 22222221 23357888876543
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.042 Score=53.01 Aligned_cols=69 Identities=13% Similarity=0.080 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++++|+|+ |++|+.++..|.+.|++|++.+|+.++++.+... ......++.+ +. .+.++|.||+++
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~-~~~~~~~~~~---~~-~l~~~DiVInat 398 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASR-CQGKAFPLES---LP-ELHRIDIIINCL 398 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hccceechhH---hc-ccCCCCEEEEcC
Confidence 45678999997 8999999999999999999999987766543211 1001112222 22 256789999873
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.27 Score=45.33 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--hH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPSE--GF 174 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~~ 174 (265)
++.+|+|.|+ |.+|..+++.+...|.+|++++.+.++.... ..-++..+ .|..+.+.+.+...++|.+|-+.+ ..
T Consensus 183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~~~~~~D~vid~~g~~~~ 260 (360)
T PLN02586 183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF-LVSTDPEKMKAAIGTMDYIIDTVSAVHA 260 (360)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE-EcCCCHHHHHhhcCCCCEEEECCCCHHH
Confidence 5678999776 9999999999989999998887766543222 12233222 233444556555567899997632 23
Q ss_pred HHHHHHh-CCCCEEEEecc
Q 024643 175 ISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 175 ~~~aa~~-~gv~r~V~iSS 192 (265)
+..+.+. ..-.+++.++.
T Consensus 261 ~~~~~~~l~~~G~iv~vG~ 279 (360)
T PLN02586 261 LGPLLGLLKVNGKLITLGL 279 (360)
T ss_pred HHHHHHHhcCCcEEEEeCC
Confidence 3333222 22357887764
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.24 Score=44.17 Aligned_cols=95 Identities=8% Similarity=0.090 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHHc--CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~~--~~d~vi~~~ 171 (265)
.++.+|+|.|++|.+|..+++.+...|.+|++++++.++.+.+...+++.+ .+..+. +.+.+... ++|.++.+.
T Consensus 138 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~d~~ 216 (324)
T cd08292 138 KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPV-VSTEQPGWQDKVREAAGGAPISVALDSV 216 (324)
T ss_pred CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEE-EcCCCchHHHHHHHHhCCCCCcEEEECC
Confidence 346789999999999999999999999999999888766544432233222 122332 33444443 689999762
Q ss_pred -chHHHHHHHh-CCCCEEEEecc
Q 024643 172 -EGFISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 172 -~~~~~~aa~~-~gv~r~V~iSS 192 (265)
......+.+. ....+||.++.
T Consensus 217 g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 217 GGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred CChhHHHHHHhhcCCcEEEEEec
Confidence 2223333222 23458887764
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 3e-11
Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 17/179 (9%)
Query: 82 GSNEEDEEKEDEFPEEARDA----VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA 136
GS+ VL+ I + VI L K+ + +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61
Query: 137 MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF--------ISNAGSLKGVQHVI 188
+ + T + + GD N LK A++G + G + A V+ +I
Sbjct: 62 HKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLI 121
Query: 189 LLSQLSVYRGSGGIQALMKGNARKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGK 243
+ L +Y G + + ASG+ YTI+R L +
Sbjct: 122 FVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIID 180
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 1e-09
Identities = 17/147 (11%), Positives = 40/147 (27%), Gaps = 18/147 (12%)
Query: 111 IGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170
G + + + LV+D + GD + + G ++I
Sbjct: 15 TGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIV- 73
Query: 171 SEGFISNAGSLK----------------GVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214
G ++ GV V+ + + + ++
Sbjct: 74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI 133
Query: 215 EQDESMLMASGIPYTIIRTGVLQNTPG 241
+ +L SG+ Y + + + P
Sbjct: 134 RMHK-VLRESGLKYVAVMPPHIGDQPL 159
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-09
Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 23/155 (14%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA 160
+++T +G + I V++ + + V D N++ + A
Sbjct: 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA 62
Query: 161 LRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207
+G+ + I + A GV H+I + + + +
Sbjct: 63 FKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQ-SGVAHIIFIGYYADQHNNPFHMSPYF 121
Query: 208 GNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
G A +L SGI YT +R + +
Sbjct: 122 GYA-------SRLLSTSGIDYTYVRMAMYMDPLKP 149
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 54.9 bits (132), Expect = 3e-09
Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 44/181 (24%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
VLVT GQ+V L + K LV+ + E G + GD ++ +
Sbjct: 7 VLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK-EKIGGEADVFIGDITDADSINP 65
Query: 160 ALRGVRSIIC-------PSEGFISNAGSLK----------------------------GV 184
A +G+ +++ GF G GV
Sbjct: 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 185 QHVILLSQLSVYRGSGGIQALMKGN---ARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 241
+H++++ + + L GN ++ AEQ L SG PYTIIR G L + G
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQ---YLADSGTPYTIIRAGGLLDKEG 182
Query: 242 G 242
G
Sbjct: 183 G 183
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 23/154 (14%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
+ +T +G VI SL+ V ++I A+V++ A + D ++ L +
Sbjct: 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTS 61
Query: 160 ALRGVRS--IICPSEG---------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208
AL+GV +I SE I+ A + GV+ + S L G+
Sbjct: 62 ALQGVEKLLLISSSEVGQRAPQHRNVINAAKAA-GVKFIAYTSLLHADTSPLGLADEHIE 120
Query: 209 NARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
E ML SGI YT++R G +N
Sbjct: 121 T--------EKMLADSGIVYTLLRNGWYSENYLA 146
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 3e-08
Identities = 27/168 (16%), Positives = 52/168 (30%), Gaps = 15/168 (8%)
Query: 102 VLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGT---YVESMAGDASNKKFL 157
+ + I Q + +L+ I + + + V + G N L
Sbjct: 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXL 67
Query: 158 KTALRGVRSIICPSEGFISNAGSL------KGVQHVILLSQLSVY-RGSGGIQALMKGNA 210
+ A+ + + S+ S+ ++ VI +S + ++ N
Sbjct: 68 EQAVTNAEVVFVGAMESGSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNL 127
Query: 211 RKLAEQD----ESMLMASGIPYTIIRTGVLQNTPGGKQGFQFEEVLNF 254
Q ++L S + YTI+R L N P E F
Sbjct: 128 PISYVQGERQARNVLRESNLNYTILRLTWLYNDPEXTDYELIPEGAQF 175
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 3e-08
Identities = 30/156 (19%), Positives = 51/156 (32%), Gaps = 25/156 (16%)
Query: 102 VLVTDGDSDIGQMVILSLI--VKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT 159
+ VT +G +VI L+ V ++I A+V++ A VE GD + + L+
Sbjct: 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQK 62
Query: 160 ALRGVRS--IICPSEG-----------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206
A GV I + A GV+H+ + +
Sbjct: 63 AFAGVSKLLFISGPHYDNTLLIVQHANVV-KAARDAGVKHIAYTGYAFAEESIIPLAHVH 121
Query: 207 KGNARKLAEQDESMLMASGIPYTIIRTGV-LQNTPG 241
E + + IPYT +R +
Sbjct: 122 LAT--------EYAIRTTNIPYTFLRNALYTDFFVN 149
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 2e-07
Identities = 24/150 (16%), Positives = 57/150 (38%), Gaps = 20/150 (13%)
Query: 102 VLVTDGDSDIGQMVILSLI-VKRTRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLK 158
V+V G G V +L+ +++ + ++ K+ A E E + GD ++ ++
Sbjct: 8 VVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIME 67
Query: 159 TALRGVRSIICPSEGF--------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQA 204
AL G + + + +++ G+ +V+ ++ + + G A
Sbjct: 68 LALNGAYATFIVTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLA 127
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+ + E+ G+P T +R
Sbjct: 128 AAHFDGKGEVEE---YFRDIGVPMTSVRLP 154
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-06
Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 29/183 (15%)
Query: 82 GSNEEDEEKEDEFPEEARDA--VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139
GS+ VLV + + + ++ L K A+V+++ E
Sbjct: 2 GSSHHHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL 61
Query: 140 FGTYVESMAGDASNKKFLKTALRGVRSIIC-----PSEGFIS-------------NAGSL 181
+ + A + +++ P G
Sbjct: 62 RERGASDIVVANLEED-FSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEK 120
Query: 182 KGVQHVILLSQLSVYR---GSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238
+G++ I++S + G ++ + A++LA+ L S + YTI+R G L N
Sbjct: 121 RGIKRFIMVSSVGTVDPDQGPMNMRHYLV--AKRLADD---ELKRSSLDYTIVRPGPLSN 175
Query: 239 TPG 241
Sbjct: 176 EES 178
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 5e-05
Identities = 26/151 (17%), Positives = 59/151 (39%), Gaps = 20/151 (13%)
Query: 102 VLVTDGDSDIGQMVILSLI---------VKRTRIKALVKDKRNAMESFGTY-VESMAGDA 151
+L+ IG+ ++ + I V++T A + K ++++ + V + GD
Sbjct: 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDI 64
Query: 152 SNKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQ 203
++ + L A++ V +IC + I A G S+ + ++
Sbjct: 65 NDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFFPSEFGLDVDRHDAVE 124
Query: 204 ALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+ + K + + + A G+PYT +
Sbjct: 125 PVRQVFEEKASIRRV--IEAEGVPYTYLCCH 153
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 8e-05
Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 19/150 (12%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV--------KDKRNAMESFGTY-VESMAGDAS 152
+L+ IG+ V + + LV +K +ESF + G
Sbjct: 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID 66
Query: 153 NKKFLKTALRGVRSIIC-------PSEGFISNAGSLKGVQHVILLSQLSV-YRGSGGIQA 204
+ L A++ V +I S+ I A G S+ ++
Sbjct: 67 DHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP 126
Query: 205 LMKGNARKLAEQDESMLMASGIPYTIIRTG 234
K + + A GIPYT + +
Sbjct: 127 AKSVFEVKAKVRRA--IEAEGIPYTYVSSN 154
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 4e-04
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 19/152 (12%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALV-------KDKRNAMESFGTY-VESMAGDASN 153
VL+ G IG+ ++ + I L DK + F + + +
Sbjct: 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDD 66
Query: 154 KKFLKTALRGVRSIICPSEGFIS-----------NAGSLKGVQHVILLSQLSVYRGSGGI 202
+ L AL+ V +I G + A G L S+ +
Sbjct: 67 HQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEH 126
Query: 203 QALMKGNARKLAEQDESMLMASGIPYTIIRTG 234
+ + A+ IPYT + +
Sbjct: 127 ALQPGSITFIDKRKVRRAIEAASIPYTYVSSN 158
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 38.8 bits (91), Expect = 7e-04
Identities = 26/158 (16%), Positives = 51/158 (32%), Gaps = 20/158 (12%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTA 160
+ + +G+ ++ SL +I A + + V+++ D + +
Sbjct: 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNN--VKAVHFDVDWTPEEMAKQ 60
Query: 161 LRGVRSIIC----PSEGFIS----------NAGSLKGVQHVILLSQLSVYRGSGGIQALM 206
L G+ +II + + A V+ ILLS + + I A
Sbjct: 61 LHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGF 120
Query: 207 KGNARKL---AEQDESMLMASGIPYTIIRTGVLQNTPG 241
D + + + YTII+ G L
Sbjct: 121 DALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEA 158
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 265 | |||
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.86 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.85 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.85 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.84 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.83 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.83 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.82 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.81 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.81 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.81 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.81 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.81 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.8 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.8 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.79 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.79 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.78 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.78 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.78 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.78 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.77 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.77 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.77 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.76 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.76 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.76 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.76 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.76 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.76 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.76 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.76 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.75 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.75 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.75 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.75 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.74 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.74 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.74 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.74 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.74 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.74 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.73 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.73 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.73 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.73 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.72 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.72 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.72 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.72 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.72 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.72 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.72 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.72 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.71 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.7 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.7 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.7 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.7 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.69 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.68 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.68 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.68 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.68 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.67 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.67 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.67 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.67 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.67 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.67 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.67 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.67 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.67 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.66 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.66 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.66 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.66 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.66 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.66 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.65 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.65 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.65 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.65 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.65 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.65 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.65 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.65 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.65 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.65 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.65 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.64 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.64 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.64 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.64 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.64 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.64 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.64 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.64 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.64 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.64 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.63 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.63 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.63 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.63 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.63 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.63 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.63 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.63 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.63 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.62 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.62 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.62 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.62 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.62 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.62 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.62 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.62 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.62 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.62 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.62 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.62 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.62 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.62 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.61 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.61 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.61 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.61 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.61 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.61 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.61 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.61 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.61 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.61 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.61 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.61 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.61 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.61 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.61 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.61 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.61 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.61 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.6 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.6 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.6 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.6 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.6 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.6 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.6 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.6 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.6 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.6 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.6 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.59 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.59 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.59 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.59 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.59 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.59 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.59 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.59 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.59 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.59 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.59 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.59 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.59 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.59 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.58 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.58 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.58 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.58 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.58 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.58 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.58 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.58 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.58 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.57 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.57 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.57 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.57 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.57 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.57 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.57 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.57 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.57 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.57 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.57 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.57 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.57 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.57 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.56 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.56 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.56 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.56 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.56 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.56 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.56 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.56 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.56 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.56 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.56 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.56 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.56 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.56 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.56 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.56 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.56 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.56 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.56 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.56 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.56 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.55 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.55 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.55 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.55 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.55 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.55 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.55 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.55 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.55 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.54 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.54 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.54 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.54 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.54 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.54 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.53 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.53 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.53 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.53 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.53 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.53 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.53 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.53 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.53 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.52 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.52 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.52 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.52 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.52 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.52 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.51 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.51 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.51 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.51 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.51 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.5 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.5 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.5 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.5 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.5 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.5 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.5 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.49 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.49 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.49 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.48 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.48 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.48 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.48 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.47 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.47 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.47 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.46 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.46 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.46 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.46 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.45 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.45 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.45 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.45 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.44 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.44 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.44 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.43 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.43 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.43 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.43 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.42 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.42 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.42 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.41 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.41 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.4 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.4 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.4 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.39 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.39 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.38 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.38 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.38 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.35 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.35 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.33 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.32 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.32 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.31 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.28 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.28 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.25 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.1 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.03 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.01 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 98.98 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 98.98 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.9 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.9 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.9 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.88 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.86 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.86 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.85 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.83 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.78 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 98.78 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.75 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 98.73 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.69 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.69 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 98.68 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.67 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.66 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.58 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 98.57 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.53 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.47 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.43 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.37 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.34 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.27 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.2 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.18 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.17 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.14 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.07 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.04 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.98 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 97.96 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.9 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 97.88 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.84 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 97.82 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.8 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.78 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.76 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.73 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.73 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.68 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 97.66 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.58 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.58 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.57 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.5 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.5 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.49 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.47 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.46 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.43 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.41 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.4 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.4 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.4 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.36 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.36 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.36 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.35 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.32 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.32 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.32 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.31 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.29 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.29 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.29 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.28 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.27 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.26 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.25 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.23 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.22 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.22 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.21 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.2 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.2 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.2 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.19 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.18 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.15 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.13 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.13 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.09 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.09 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.09 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.08 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.08 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.07 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.05 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.04 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.03 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.02 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.02 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.01 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.0 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.99 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 96.99 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.98 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 96.98 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.98 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.95 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 96.95 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 96.94 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 96.94 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.92 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.91 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.89 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 96.88 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.87 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.86 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 96.85 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.85 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.83 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.83 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.83 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 96.82 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.81 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.78 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.78 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.78 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.76 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.76 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 96.74 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.74 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 96.72 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.72 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 96.72 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 96.71 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.7 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 96.68 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.68 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.67 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 96.67 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.66 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.65 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.65 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.64 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.59 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.58 | |
| 2dwc_A | 433 | PH0318, 433AA long hypothetical phosphoribosylglyc | 96.55 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.54 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 96.53 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.52 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.52 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.51 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 96.51 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 96.5 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.47 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.47 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.46 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.46 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.46 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.46 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.45 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 96.45 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 96.45 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.44 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.43 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 96.43 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.41 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 96.4 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.4 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 96.4 | |
| 1i36_A | 264 | Conserved hypothetical protein MTH1747; NADP bindi | 96.4 | |
| 2pgd_A | 482 | 6-phosphogluconate dehydrogenase; oxidoreductase ( | 96.4 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 96.39 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 96.38 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.38 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.36 | |
| 3pp8_A | 315 | Glyoxylate/hydroxypyruvate reductase A; structural | 96.36 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.32 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.32 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 96.31 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 96.31 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 96.3 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 96.28 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 96.28 | |
| 2izz_A | 322 | Pyrroline-5-carboxylate reductase 1; amino-acid bi | 96.27 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 96.27 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 96.26 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 96.25 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 96.25 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 96.25 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 96.24 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.23 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.22 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 96.2 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 96.2 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 96.18 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 96.18 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 96.18 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.18 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.16 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.16 |
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=159.71 Aligned_cols=141 Identities=17% Similarity=0.111 Sum_probs=115.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeCCc-chhhh--cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKR-NAMES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll-~~G~~V~~~~R~~~-~~~~~--~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-- 172 (265)
+++|+||||+|+||++++++|+ ++|++|++++|+++ +.+.+ ...+++++.+|++|++++.++++++|++|++.+
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 3459999999999999999999 89999999999988 76655 567899999999999999999999999998832
Q ss_pred ----hHHHHHHHhCCCCEEEEecccccccCCCCccc----ccch-hHHHHHHHHHHHHHhCCCCEEEEeCCCccCC
Q 024643 173 ----GFISNAGSLKGVQHVILLSQLSVYRGSGGIQA----LMKG-NARKLAEQDESMLMASGIPYTIIRTGVLQNT 239 (265)
Q Consensus 173 ----~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~----~~~~-~~~~~k~~~E~~l~~~gl~~tivRPg~l~~~ 239 (265)
..+.+++++.+++|||++||.+++...+.... .... .+...|..+|++++..++++++||||++.+.
T Consensus 85 n~~~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 85 GSDMASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCSEEEEEEECEEECC
T ss_pred ChhHHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCCCCEEEEechhhcCC
Confidence 23455678889999999999998865432110 0011 3445789999999999999999999998655
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-20 Score=154.50 Aligned_cols=140 Identities=13% Similarity=0.142 Sum_probs=113.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------- 172 (265)
|+|+||||||+||++++++|+++|++|++++|++++.......+++++.+|+.|++++.++++++|+||++.+
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 83 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLSP 83 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCSC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCCc
Confidence 7999999999999999999999999999999998766544356799999999999999999999999998721
Q ss_pred --------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccCCC
Q 024643 173 --------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTP 240 (265)
Q Consensus 173 --------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~~~ 240 (265)
..+.+++++.++++||++||.+++...... +.....+...|..+|+++++.+++++++||+++.+.+
T Consensus 84 ~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~-~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~~~~~~ 158 (206)
T 1hdo_A 84 TTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKV-PPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQP 158 (206)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCS-CGGGHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCC
T ss_pred cchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcccc-cccchhHHHHHHHHHHHHHhCCCCEEEEeCCcccCCC
Confidence 124456777889999999999887654321 1111233458889999999999999999999985444
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=8.5e-21 Score=163.13 Aligned_cols=145 Identities=21% Similarity=0.274 Sum_probs=111.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc---
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--- 172 (265)
.++|+|+||||+|+||++++++|+++| ++|++++|++++...+...+++++++|++|++++.++++++|+||++.+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~ 100 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED 100 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence 345789999999999999999999999 9999999999887766667899999999999999999999999997722
Q ss_pred -----hHHHHHHHhCCCCEEEEecccccccCCCCccc----ccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccCCCC
Q 024643 173 -----GFISNAGSLKGVQHVILLSQLSVYRGSGGIQA----LMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 241 (265)
Q Consensus 173 -----~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~----~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~~~~ 241 (265)
..+.+++++.+++|||++||.+++........ ......+..+..+|++++..++++++||||++.+.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~vrPg~i~~~~~ 178 (236)
T 3qvo_A 101 LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDI 178 (236)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSEEEEEEECEEECCSC
T ss_pred hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCCEEEEeCCcccCCCC
Confidence 12456678889999999999998765432110 0011122355677888999999999999999865543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.85 E-value=8e-21 Score=161.08 Aligned_cols=140 Identities=19% Similarity=0.195 Sum_probs=113.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC-HHHHHHHHcCCCEEEEcCc------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSE------ 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d-~~~l~~~~~~~d~vi~~~~------ 172 (265)
|+|+||||+|+||++++++|+++|++|++++|+.++.... .+++++.+|++| ++++.++++++|+||++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~ 78 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL 78 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence 6899999999999999999999999999999998766543 679999999999 9999999999999998721
Q ss_pred --------hHHHHHHHhCCCCEEEEecccccccCCCCcc-ccc-chhHHHHHHHHHHHH-HhCCCCEEEEeCCCccCCCC
Q 024643 173 --------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALM-KGNARKLAEQDESML-MASGIPYTIIRTGVLQNTPG 241 (265)
Q Consensus 173 --------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~-~~~-~~~~~~~k~~~E~~l-~~~gl~~tivRPg~l~~~~~ 241 (265)
..+.+++++.++++||++||.+++....... +.. ...+...|..+|+++ +..+++++++|||++.+...
T Consensus 79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~ilrp~~v~g~~~ 158 (219)
T 3dqp_A 79 LKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGALTEEEA 158 (219)
T ss_dssp CCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEEEECSEECSCC
T ss_pred EeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEEeCceEecCCC
Confidence 1366778889999999999988765432100 011 122335888999999 77899999999999865443
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-19 Score=155.57 Aligned_cols=142 Identities=25% Similarity=0.375 Sum_probs=115.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc---
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--- 172 (265)
.+|+|+||||+|+||++++++|+++ |++|++++|++++...+ ..+++++.+|++|++++.++++++|+||++.+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~ 81 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 81 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccccc
Confidence 4689999999999999999999999 89999999998766544 45788999999999999999999999998711
Q ss_pred --------------------------------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 173 --------------------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 173 --------------------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
..+.+++++.++++||++||.+++.+..+..++....+...|..+|.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~ 161 (253)
T 1xq6_A 82 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY 161 (253)
T ss_dssp EECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred cccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHH
Confidence 013345677789999999999887654444444433344578999999
Q ss_pred HHhCCCCEEEEeCCCccCCC
Q 024643 221 LMASGIPYTIIRTGVLQNTP 240 (265)
Q Consensus 221 l~~~gl~~tivRPg~l~~~~ 240 (265)
+++.+++++++|||++.+..
T Consensus 162 ~~~~~i~~~~vrpg~v~~~~ 181 (253)
T 1xq6_A 162 LADSGTPYTIIRAGGLLDKE 181 (253)
T ss_dssp HHTSSSCEEEEEECEEECSC
T ss_pred HHhCCCceEEEecceeecCC
Confidence 99999999999999875543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=157.92 Aligned_cols=144 Identities=15% Similarity=0.181 Sum_probs=112.2
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCcc-EEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v-~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
.....+|+|+||||||+||++++++|+++|++|++++|+.++...+...++ +++.+|++ +.+.+++.++|+||++.+
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag 93 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAG 93 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCC
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCC
Confidence 345678999999999999999999999999999999999988776665678 99999998 778889999999998821
Q ss_pred ------------------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCC
Q 024643 173 ------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTG 234 (265)
Q Consensus 173 ------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg 234 (265)
..+.+++++.+++|||++||.+.+.+.... .....+...|..+|++++..+++++++|||
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~--~~~~~Y~~sK~~~e~~~~~~gi~~~~lrpg 171 (236)
T 3e8x_A 94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGP--MNMRHYLVAKRLADDELKRSSLDYTIVRPG 171 (236)
T ss_dssp CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSC--GGGHHHHHHHHHHHHHHHHSSSEEEEEEEC
T ss_pred CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCh--hhhhhHHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 024556778899999999997665432111 111233458889999999999999999999
Q ss_pred CccCCCC
Q 024643 235 VLQNTPG 241 (265)
Q Consensus 235 ~l~~~~~ 241 (265)
++.+...
T Consensus 172 ~v~~~~~ 178 (236)
T 3e8x_A 172 PLSNEES 178 (236)
T ss_dssp SEECSCC
T ss_pred cccCCCC
Confidence 9765443
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-19 Score=153.94 Aligned_cols=138 Identities=12% Similarity=0.146 Sum_probs=107.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~----- 173 (265)
+|+|+||||+|+||++++++|+++|++|++++|+.++...+ ..+++++.+|+.|++++.++++++|+||++.+.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 82 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP 82 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence 57999999999999999999999999999999998766443 367999999999999999999999999988211
Q ss_pred -----------HHHHHHHhCCCCEEEEecccccccCCCCc----ccccchhHH-HHHHHHHHHH---H-hCCCCEEEEeC
Q 024643 174 -----------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QALMKGNAR-KLAEQDESML---M-ASGIPYTIIRT 233 (265)
Q Consensus 174 -----------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----~~~~~~~~~-~~k~~~E~~l---~-~~gl~~tivRP 233 (265)
.+.+++++.+++|||++||.+++...... .+..+...| ..|...|.++ . +.+++++++||
T Consensus 83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp 162 (227)
T 3dhn_A 83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSP 162 (227)
T ss_dssp -CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccCccEEEEeC
Confidence 14566788899999999998876433211 111122223 4777777443 3 57999999999
Q ss_pred CCcc
Q 024643 234 GVLQ 237 (265)
Q Consensus 234 g~l~ 237 (265)
+++.
T Consensus 163 ~~v~ 166 (227)
T 3dhn_A 163 AADM 166 (227)
T ss_dssp CSEE
T ss_pred Cccc
Confidence 9954
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=158.62 Aligned_cols=132 Identities=16% Similarity=0.250 Sum_probs=108.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------ 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------ 172 (265)
|+|+||||||+||++++++|+++ |++|++++|++++...+...+++++.+|++|++++.++++++|+||++.+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~ 80 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF 80 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence 67999999999999999999998 99999999999887766677899999999999999999999999998822
Q ss_pred ------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 173 ------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 173 ------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
..+.+++++.|++||||+||.+..... ++... ..+..+|+.+++.|++++++|||++.+
T Consensus 81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~----~~~~~---~~~~~~e~~~~~~g~~~~ilrp~~~~~ 145 (289)
T 3e48_A 81 KRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN----PFHMS---PYFGYASRLLSTSGIDYTYVRMAMYMD 145 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC----CSTTH---HHHHHHHHHHHHHCCEEEEEEECEEST
T ss_pred hhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC----CCccc---hhHHHHHHHHHHcCCCEEEEecccccc
Confidence 125566888999999999996543221 22111 234467888889999999999998754
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-19 Score=156.11 Aligned_cols=131 Identities=23% Similarity=0.284 Sum_probs=109.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (265)
|+|+||||||+||++++++|+++ |++|++++|+..+...+...+++++.+|++|++++.++++++|+||++..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~ 80 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN 80 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence 57999999999999999999999 99999999998776555456789999999999999999999999998732
Q ss_pred --h-----HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 173 --G-----FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 173 --~-----~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
. .+.+++++.+++|||++||.+++..+ ..+...|..+|+++++.+++++++||+++.+
T Consensus 81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~--------~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~ 145 (287)
T 2jl1_A 81 TLLIVQHANVVKAARDAGVKHIAYTGYAFAEESI--------IPLAHVHLATEYAIRTTNIPYTFLRNALYTD 145 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEEETTGGGCC--------STHHHHHHHHHHHHHHTTCCEEEEEECCBHH
T ss_pred hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCCCC--------CchHHHHHHHHHHHHHcCCCeEEEECCEecc
Confidence 1 24556788899999999999886321 1233588899999999999999999998643
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.81 E-value=3.9e-19 Score=157.30 Aligned_cols=137 Identities=16% Similarity=0.226 Sum_probs=109.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcch--hhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~--~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-- 173 (265)
+|+|+||||||+||++++++|+++| ++|++++|++++. ..+...+++++.+|+.|++++.++++++|+||++.+.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 84 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE 84 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence 5789999999999999999999999 9999999997653 2233457899999999999999999999999987321
Q ss_pred ------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 174 ------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 174 ------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
.+.+++++.|++|||++|+.+++...... ....++..|..+|++++++|++++++|||++.+
T Consensus 85 ~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~~~---~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~~~~ 158 (299)
T 2wm3_A 85 SCSQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGR---LAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFE 158 (299)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTTTS---CCCHHHHHHHHHHHHHHHHTCCEEEEECCEEGG
T ss_pred cccchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCCCc---ccCchhhHHHHHHHHHHHCCCCEEEEeecHHhh
Confidence 13455777899999998887776432111 112334688899999999999999999998643
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.5e-19 Score=159.12 Aligned_cols=141 Identities=11% Similarity=0.016 Sum_probs=109.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG---- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~---- 173 (265)
.+|+|+||||+|+||++++++|+++|++|++++|+..+...+...+++++.+|+.|++++.++++++|+|||+...
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~ 91 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSR 91 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC-------
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCC
Confidence 4579999999999999999999999999999999987665444447899999999999999999999999987210
Q ss_pred ----------------HHHHHHHhCCCCEEEEecccccccCCCC------cccccc----h-hHHHHHHHHHHHHHh---
Q 024643 174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGG------IQALMK----G-NARKLAEQDESMLMA--- 223 (265)
Q Consensus 174 ----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~------~~~~~~----~-~~~~~k~~~E~~l~~--- 223 (265)
.+.+++...+++||||+||.++|..... ..+..+ . .+...|..+|++++.
T Consensus 92 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~ 171 (342)
T 2x4g_A 92 PRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR 171 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh
Confidence 1344567778999999999998864322 011111 2 233578888888765
Q ss_pred CCCCEEEEeCCCccC
Q 024643 224 SGIPYTIIRTGVLQN 238 (265)
Q Consensus 224 ~gl~~tivRPg~l~~ 238 (265)
.+++++++||+++..
T Consensus 172 ~g~~~~ilrp~~v~g 186 (342)
T 2x4g_A 172 NGLPVVIGIPGMVLG 186 (342)
T ss_dssp TTCCEEEEEECEEEC
T ss_pred cCCcEEEEeCCceEC
Confidence 499999999998643
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-19 Score=159.61 Aligned_cols=140 Identities=18% Similarity=0.244 Sum_probs=105.4
Q ss_pred CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 92 ~~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.......+|+|||||||||||++++++|+++|++|++++|+... .+++++.+|+.|.+++.++++++|+||++.
T Consensus 12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 34456678899999999999999999999999999999998754 568899999999999999999999999872
Q ss_pred c------h--------------HHHHHHHhCCCCEEEEecccccccCC--CC--c---ccccchhHH-HHHHHHHHHHH-
Q 024643 172 E------G--------------FISNAGSLKGVQHVILLSQLSVYRGS--GG--I---QALMKGNAR-KLAEQDESMLM- 222 (265)
Q Consensus 172 ~------~--------------~~~~aa~~~gv~r~V~iSS~~v~~~~--~~--~---~~~~~~~~~-~~k~~~E~~l~- 222 (265)
. . .+.+++++.++++|||+||.++|... .. . .+..+...| ..|..+|++++
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~ 165 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRF 165 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHH
Confidence 1 0 14556778899999999999998652 10 0 112222233 47888888775
Q ss_pred ---hCCCCEEEEeCCCcc
Q 024643 223 ---ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 ---~~gl~~tivRPg~l~ 237 (265)
+.+++++++||+++.
T Consensus 166 ~~~~~~~~~~ilRp~~v~ 183 (347)
T 4id9_A 166 HQRSGAMETVILRFSHTQ 183 (347)
T ss_dssp HHHHSSSEEEEEEECEEE
T ss_pred HHHhcCCceEEEccceEe
Confidence 479999999999875
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.81 E-value=5.9e-19 Score=160.61 Aligned_cols=141 Identities=13% Similarity=0.129 Sum_probs=110.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhc-CCccEEeeeCCC-CHHHHHHHHcCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDAS-NKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~-d~~~l~~~~~~~d~vi~~~~ 172 (265)
...+|+|+||||||+||++|+++|+++ |++|++++|+.++...+. ..+++++.+|++ |.+.+.++++++|+||++..
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 345789999999999999999999998 999999999987765543 368999999999 99999999999999998611
Q ss_pred ----------------------hHHHHHHHhCCCCEEEEecccccccCCCCc--c----c-----c-cch-hHHHHHHHH
Q 024643 173 ----------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGI--Q----A-----L-MKG-NARKLAEQD 217 (265)
Q Consensus 173 ----------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--~----~-----~-~~~-~~~~~k~~~ 217 (265)
..+.+++++.+ +||||+||.++|...... . + . .+. .+...|..+
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~ 179 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLM 179 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHH
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHH
Confidence 01455577778 999999999988653221 0 0 0 111 233588899
Q ss_pred HHHHHhC---CCCEEEEeCCCcc
Q 024643 218 ESMLMAS---GIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~~---gl~~tivRPg~l~ 237 (265)
|++++.. +++++++||+.+.
T Consensus 180 E~~~~~~~~~g~~~~ilRp~~v~ 202 (372)
T 3slg_A 180 DRVIWGYGMEGLNFTLFRPFNWI 202 (372)
T ss_dssp HHHHHHHHTTTCEEEEEEECSEE
T ss_pred HHHHHHHHHCCCCEEEEcccccc
Confidence 9988765 9999999999864
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.8e-19 Score=148.76 Aligned_cols=136 Identities=7% Similarity=0.097 Sum_probs=99.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------- 172 (265)
|+|+||||||+||++++++|+++|++|++++|++++...+. .+++++.+|++|+++ +++.++|+||++.+
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 77 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE 77 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence 68999999999999999999999999999999998776655 789999999999887 88899999998821
Q ss_pred ------hHHHHHHHhCCCCEEEEecccccccCCCCc------ccccchhHH-HHHHHHHHH--HH--hCCCCEEEEeCCC
Q 024643 173 ------GFISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNAR-KLAEQDESM--LM--ASGIPYTIIRTGV 235 (265)
Q Consensus 173 ------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~~~~-~~k~~~E~~--l~--~~gl~~tivRPg~ 235 (265)
..+.+++++.+++|||++||.+++...... .+..+...| ..|...|.+ +. ..+++|+++||++
T Consensus 78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~ 157 (221)
T 3ew7_A 78 KHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSA 157 (221)
T ss_dssp SHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSS
T ss_pred hHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhccCccEEEEeCcc
Confidence 125566778889999999998775432210 000010101 134444433 55 6899999999999
Q ss_pred ccC
Q 024643 236 LQN 238 (265)
Q Consensus 236 l~~ 238 (265)
+.+
T Consensus 158 v~g 160 (221)
T 3ew7_A 158 MFE 160 (221)
T ss_dssp CCC
T ss_pred eec
Confidence 754
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=150.91 Aligned_cols=136 Identities=11% Similarity=0.063 Sum_probs=103.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~------ 173 (265)
|+|+||||||+||++++++|+++|++|++++|+.++...+...+++++.+|++|+++ ++++++|+||++.+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~ 78 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR 78 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence 689999999999999999999999999999999988777777789999999999887 889999999987211
Q ss_pred ---------HHHHHHHhCCCCEEEEecccccccCCCCc------cccc---chhHHHHHHHHHHH--H-HhCCCCEEEEe
Q 024643 174 ---------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALM---KGNARKLAEQDESM--L-MASGIPYTIIR 232 (265)
Q Consensus 174 ---------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~---~~~~~~~k~~~E~~--l-~~~gl~~tivR 232 (265)
.+.+++++.+ +|||++||.+++...... .+.. ...+...|...|.+ + +..+++++++|
T Consensus 79 ~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~~~i~~~ivr 157 (224)
T 3h2s_A 79 GYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157 (224)
T ss_dssp THHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhcCCCcEEEEc
Confidence 1344566778 999999998664432210 0011 11222366666643 2 35799999999
Q ss_pred CCCccC
Q 024643 233 TGVLQN 238 (265)
Q Consensus 233 Pg~l~~ 238 (265)
|+++..
T Consensus 158 p~~v~g 163 (224)
T 3h2s_A 158 PSEAFP 163 (224)
T ss_dssp ECSBCC
T ss_pred CccccC
Confidence 999763
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=156.17 Aligned_cols=142 Identities=13% Similarity=0.023 Sum_probs=109.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh----hcC-------CccEEeeeCCCCHHHHHHHHcCCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFG-------TYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~-------~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
..+|+|+|||||||||++|+++|+++|++|++++|+...... +.. .+++++.+|+.|++++.++++++|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 456899999999999999999999999999999997643221 111 579999999999999999999999
Q ss_pred EEEEcCch----------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHH
Q 024643 166 SIICPSEG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQD 217 (265)
Q Consensus 166 ~vi~~~~~----------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~ 217 (265)
+||++... .+.+++++.+++||||+||.++|...... .+..+...| ..|..+
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 182 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVN 182 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHH
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHH
Confidence 99988320 14556788899999999999998654221 111122233 478888
Q ss_pred HHHHHh----CCCCEEEEeCCCccC
Q 024643 218 ESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 218 E~~l~~----~gl~~tivRPg~l~~ 238 (265)
|++++. .|++++++||+.+..
T Consensus 183 E~~~~~~~~~~g~~~~ilRp~~v~G 207 (351)
T 3ruf_A 183 EIYAQVYARTYGFKTIGLRYFNVFG 207 (351)
T ss_dssp HHHHHHHHHHHCCCCEEEEECSEES
T ss_pred HHHHHHHHHHhCCCEEEEeeCceeC
Confidence 887653 699999999998654
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.79 E-value=2e-18 Score=153.51 Aligned_cols=136 Identities=16% Similarity=0.115 Sum_probs=105.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc------
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------ 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------ 172 (265)
+|+|+||||||+||++++++|+++|++|++++|+..... + .+++++.+|+. .+++.++++++|+||++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~--~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~ 77 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I--NDYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG 77 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C--CceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence 589999999999999999999999999999999954433 2 27899999999 9999999999999998721
Q ss_pred ------------hHHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchh-HHHHHHHHHHHHHh----CCCCEEE
Q 024643 173 ------------GFISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLMA----SGIPYTI 230 (265)
Q Consensus 173 ------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~-~~~~k~~~E~~l~~----~gl~~ti 230 (265)
..+.+++++.+++||||+||.++|...... .+..+.. +...|..+|++++. .++++++
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~i 157 (311)
T 3m2p_A 78 KISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKN 157 (311)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHSCCEEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 125566788899999999999988643211 1111222 33578888888765 7999999
Q ss_pred EeCCCccC
Q 024643 231 IRTGVLQN 238 (265)
Q Consensus 231 vRPg~l~~ 238 (265)
+||+.+..
T Consensus 158 lRp~~v~G 165 (311)
T 3m2p_A 158 LRFAHLYG 165 (311)
T ss_dssp EEECEEEC
T ss_pred EeeCceeC
Confidence 99998653
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=8.8e-19 Score=153.42 Aligned_cols=130 Identities=25% Similarity=0.334 Sum_probs=108.2
Q ss_pred EEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc------
Q 024643 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------ 172 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------ 172 (265)
+|+||||||+||++++++|+++ |++|++++|++++...+...+++++.+|++|++++.++++++|+||++..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~ 80 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR 80 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence 4899999999999999999999 99999999998766555456789999999999999999999999998732
Q ss_pred ----hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 173 ----GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 173 ----~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
..+.+++++.+++|||++||.+++..+ ..+...|..+|+++++.+++++++||+++.+
T Consensus 81 ~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~--------~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~ 142 (286)
T 2zcu_A 81 APQHRNVINAAKAAGVKFIAYTSLLHADTSP--------LGLADEHIETEKMLADSGIVYTLLRNGWYSE 142 (286)
T ss_dssp -CHHHHHHHHHHHHTCCEEEEEEETTTTTCC--------STTHHHHHHHHHHHHHHCSEEEEEEECCBHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCCc--------chhHHHHHHHHHHHHHcCCCeEEEeChHHhh
Confidence 124566778899999999999887321 1223478899999999999999999998643
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.8e-18 Score=148.18 Aligned_cols=134 Identities=16% Similarity=0.173 Sum_probs=109.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch--
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-- 173 (265)
.+|+|+||||+|+||++++++|+++|+ +|++++|++++........++++.+|++|++++.++++++|++|++.+.
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~ 96 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR 96 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence 468999999999999999999999999 9999999987654433346889999999999999999999999988210
Q ss_pred -----------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCC-CEEEEeCCC
Q 024643 174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGI-PYTIIRTGV 235 (265)
Q Consensus 174 -----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl-~~tivRPg~ 235 (265)
.+.+++++.++++||++||.+++.... ..+...|..+|.+++..++ ++++||||+
T Consensus 97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~-------~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~ 169 (242)
T 2bka_A 97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN-------FLYLQVKGEVEAKVEELKFDRYSVFRPGV 169 (242)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS-------SHHHHHHHHHHHHHHTTCCSEEEEEECCE
T ss_pred ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCCCc-------chHHHHHHHHHHHHHhcCCCCeEEEcCce
Confidence 133456778899999999998875321 1233588899999999999 499999998
Q ss_pred ccC
Q 024643 236 LQN 238 (265)
Q Consensus 236 l~~ 238 (265)
+..
T Consensus 170 v~~ 172 (242)
T 2bka_A 170 LLC 172 (242)
T ss_dssp EEC
T ss_pred ecC
Confidence 743
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-18 Score=151.55 Aligned_cols=135 Identities=14% Similarity=0.143 Sum_probs=107.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (265)
++|+|+|||| |+||++++++|+++|++|++++|+..+...+...+++++.+|+.|.+ ++++|+|||+..
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~ 77 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGG 77 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTB
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCccccc
Confidence 4689999998 99999999999999999999999988776666678999999999944 789999998821
Q ss_pred ----hHHHHHHHh--CCCCEEEEecccccccCCCCc-----ccccchh-HHHHHHHHHHHHHhC-CCCEEEEeCCCccC
Q 024643 173 ----GFISNAGSL--KGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLMAS-GIPYTIIRTGVLQN 238 (265)
Q Consensus 173 ----~~~~~aa~~--~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~-~~~~k~~~E~~l~~~-gl~~tivRPg~l~~ 238 (265)
..+.+++++ .+++||||+||.++|...... .+..+.. +...|..+|++++.. +++++++||+++..
T Consensus 78 ~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~ilRp~~v~G 156 (286)
T 3ius_A 78 DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYG 156 (286)
T ss_dssp CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHSTTCCEEEEEECEEEB
T ss_pred cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeccceEC
Confidence 125566666 789999999999998654321 1112222 335889999999997 99999999998643
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=6.7e-18 Score=154.68 Aligned_cols=141 Identities=15% Similarity=0.049 Sum_probs=108.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (265)
.+|+|+||||+|+||++++++|+++|++|++++|+..+.......+++++.+|+.|.+++.++++++|+|||+..
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~ 107 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM 107 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence 468999999999999999999999999999999987654433345789999999999999999999999998721
Q ss_pred h------------------HHHHHHHhCCCCEEEEecccccccCCCC-------c---c--cccchhHH-HHHHHHHHHH
Q 024643 173 G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------I---Q--ALMKGNAR-KLAEQDESML 221 (265)
Q Consensus 173 ~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~-------~---~--~~~~~~~~-~~k~~~E~~l 221 (265)
. .+.+++++.++++|||+||.++|..... . . +..+...| ..|..+|+++
T Consensus 108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~ 187 (379)
T 2c5a_A 108 GFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELC 187 (379)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHH
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHH
Confidence 0 1334567789999999999988764211 0 0 11122233 4788888876
Q ss_pred Hh----CCCCEEEEeCCCccC
Q 024643 222 MA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 222 ~~----~gl~~tivRPg~l~~ 238 (265)
+. .+++++++||+++..
T Consensus 188 ~~~~~~~gi~~~ilrp~~v~G 208 (379)
T 2c5a_A 188 KHYNKDFGIECRIGRFHNIYG 208 (379)
T ss_dssp HHHHHHHCCEEEEEEECCEEC
T ss_pred HHHHHHHCCCEEEEEeCceeC
Confidence 43 599999999998653
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=4.2e-18 Score=148.98 Aligned_cols=140 Identities=13% Similarity=0.116 Sum_probs=108.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----h
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-----~ 173 (265)
+++|+||||+|+||++++++|+++|++|++++|+..+.. ..+++++.+|++|.+++.++++++|+||++.+ .
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~ 79 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVEKP 79 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCC
Confidence 468999999999999999999999999999999986553 56789999999999999999999999998721 1
Q ss_pred -------------HHHHHHHhCCCCEEEEecccccccCCCCc------ccccchhHH-HHHHHHHHHHH----hCCCCEE
Q 024643 174 -------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNAR-KLAEQDESMLM----ASGIPYT 229 (265)
Q Consensus 174 -------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~~~~-~~k~~~E~~l~----~~gl~~t 229 (265)
.+.+++++.+++|||++||..++...... .+..+...| ..|..+|.+++ +.+++++
T Consensus 80 ~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~g~~~~ 159 (267)
T 3rft_A 80 FEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFGQETA 159 (267)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 14455778889999999999887432111 111222233 47777777664 5799999
Q ss_pred EEeCCCccCCCC
Q 024643 230 IIRTGVLQNTPG 241 (265)
Q Consensus 230 ivRPg~l~~~~~ 241 (265)
+|||+.+...+.
T Consensus 160 ~vr~~~v~~~~~ 171 (267)
T 3rft_A 160 LVRIGSCTPEPN 171 (267)
T ss_dssp EEEECBCSSSCC
T ss_pred EEEeecccCCCC
Confidence 999998765443
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=7.3e-18 Score=153.66 Aligned_cols=134 Identities=18% Similarity=0.197 Sum_probs=107.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch--hhhcC-CccEEeeeC-CCCHHHHHHHHcCCCEEEEcCc--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--MESFG-TYVESMAGD-ASNKKFLKTALRGVRSIICPSE-- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~--~~~~~-~~v~~i~~D-~~d~~~l~~~~~~~d~vi~~~~-- 172 (265)
+|+|+||||||+||++++++|+++|++|++++|+.++. ..+.. .+++++.+| ++|++++.++++++|+||++..
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~~ 84 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ 84 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCST
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCCC
Confidence 57899999999999999999999999999999988654 22322 478999999 9999999999999999997621
Q ss_pred --------hHHHHHHHhCC-CCEEEEeccccc--ccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 173 --------GFISNAGSLKG-VQHVILLSQLSV--YRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 173 --------~~~~~aa~~~g-v~r~V~iSS~~v--~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
..+.+++++.+ ++|||++||.+. +.. ... ..++..|..+|+++++.++++++|||+++.+
T Consensus 85 ~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-~~~-----~~y~~sK~~~E~~~~~~gi~~~ivrpg~~g~ 155 (352)
T 1xgk_A 85 AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGP-WPA-----VPMWAPKFTVENYVRQLGLPSTFVYAGIYNN 155 (352)
T ss_dssp TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSS-CCC-----CTTTHHHHHHHHHHHTSSSCEEEEEECEEGG
T ss_pred CcHHHHHHHHHHHHHHHcCCccEEEEeCCccccccCC-CCC-----ccHHHHHHHHHHHHHHcCCCEEEEecceecC
Confidence 12455677888 999999999863 221 111 1223588999999999999999999998754
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.77 E-value=9.3e-18 Score=149.98 Aligned_cols=139 Identities=17% Similarity=0.205 Sum_probs=105.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE---- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~---- 172 (265)
+|+|+||||+|+||++++++|+++|++|++++|+..........+++++.+|+.|.+++.++++ ++|+|||+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~~ 80 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLV 80 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccCc
Confidence 4789999999999999999999999999999997654333333478999999999999999998 8999998721
Q ss_pred h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHHHh----C
Q 024643 173 G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESMLMA----S 224 (265)
Q Consensus 173 ~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l~~----~ 224 (265)
. .+.+++++.++++||++||.++|..... . .+..+...| ..|..+|++++. .
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 160 (330)
T 2c20_A 81 GVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS 160 (330)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS
T ss_pred cccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence 0 1334567788999999999998864321 0 111122233 478888887754 5
Q ss_pred CCCEEEEeCCCcc
Q 024643 225 GIPYTIIRTGVLQ 237 (265)
Q Consensus 225 gl~~tivRPg~l~ 237 (265)
+++++++||+.+.
T Consensus 161 ~~~~~ilrp~~v~ 173 (330)
T 2c20_A 161 NLRYKIFRYFNVA 173 (330)
T ss_dssp SCEEEEEECSEEE
T ss_pred CCcEEEEecCccc
Confidence 8999999999754
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-18 Score=150.75 Aligned_cols=137 Identities=19% Similarity=0.237 Sum_probs=104.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-------cchhh---hcCCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-------~~~~~---~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
+|+|+||||||+||++++++|+++|++|++++|+. ++... +...+++++.+|+.|++++.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 57899999999999999999999999999999987 33321 223578999999999999999999999999
Q ss_pred EcCc-------hHHHHHHHhCC-CCEEEEecccccccCCCCcccccc-hhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 169 CPSE-------GFISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMK-GNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 169 ~~~~-------~~~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
++.+ ..+.++++++| ++|||+ |+.+..... ..+..+ ...|..|..+|+++++.+++++++|||++.+
T Consensus 82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~--~~~~~p~~~~y~sK~~~e~~~~~~~i~~~~lrp~~~~~ 157 (307)
T 2gas_A 82 CAAGRLLIEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDR--HDAVEPVRQVFEEKASIRRVIEAEGVPYTYLCCHAFTG 157 (307)
T ss_dssp ECSSSSCGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTS--CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEETT
T ss_pred ECCcccccccHHHHHHHHHhcCCceEEee-cccccCccc--ccCCCcchhHHHHHHHHHHHHHHcCCCeEEEEcceeec
Confidence 8732 23567788888 999984 443321111 001111 2234788999999999999999999997643
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=5.9e-18 Score=150.17 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=105.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-----chh---hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-----~~~---~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|+||||||+||++++++|+++|++|++++|+.. +.. .+...+++++.+|+.|++++.++++++|+||++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~ 83 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 83 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence 578999999999999999999999999999999853 222 123567999999999999999999999999987
Q ss_pred Cc-----------hHHHHHHHhCC-CCEEEEecccccccCCCCcccccc-hhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 171 SE-----------GFISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMK-GNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 171 ~~-----------~~~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+ ..+.++++++| ++|||+ |+.+..... ...+..+ ...|..|..+|+++++.+++++++|||++.
T Consensus 84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~-~~~~~~p~~~~y~sK~~~e~~~~~~g~~~~ilrp~~~~ 161 (313)
T 1qyd_A 84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDI-MEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFA 161 (313)
T ss_dssp CCCSSSSTTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTS-CCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEH
T ss_pred CccccchhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccc-cccCCCCCcchHHHHHHHHHHHHhcCCCeEEEEeceec
Confidence 21 13567788888 999996 443321111 0011111 234478999999999999999999999754
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.2e-17 Score=149.91 Aligned_cols=140 Identities=16% Similarity=0.145 Sum_probs=107.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc--CCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR--GVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi 168 (265)
.+|+|+||||+||||++++++|+++|++|++++|+....... .+..++++.+|++|++++.++++ ++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 467999999999999999999999999999999987543322 25678999999999999999998 899999
Q ss_pred EcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHH
Q 024643 169 CPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESM 220 (265)
Q Consensus 169 ~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~ 220 (265)
|+.. . .+.+++++.++++||++||.++|...... .+..+...| ..|..+|++
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 163 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQI 163 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHH
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHH
Confidence 8721 0 13345777889999999999988543211 122222333 478888888
Q ss_pred HHh----C-CCCEEEEeCCCcc
Q 024643 221 LMA----S-GIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l~~----~-gl~~tivRPg~l~ 237 (265)
++. . +++++++||+.+.
T Consensus 164 ~~~~~~~~~~~~~~~lRp~~v~ 185 (341)
T 3enk_A 164 LRDVEAADPSWRVATLRYFNPV 185 (341)
T ss_dssp HHHHHHHCTTCEEEEEEECEEE
T ss_pred HHHHhhcCCCceEEEEeecccc
Confidence 764 3 5999999999754
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-18 Score=150.58 Aligned_cols=137 Identities=15% Similarity=0.152 Sum_probs=107.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG------ 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~------ 173 (265)
|+|+||||||+||++++++|+++|++|++++|+..........+++++.+|+.|.+ +.+++++ |+|||+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~ 78 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS 78 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence 68999999999999999999999999999999887665555678999999999998 8888888 999987210
Q ss_pred ----------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHHh----CCCC
Q 024643 174 ----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLMA----SGIP 227 (265)
Q Consensus 174 ----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~~----~gl~ 227 (265)
.+.+++++.++++|||+||.++|...... .+..+...| ..|..+|++++. .+++
T Consensus 79 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~g~~ 158 (312)
T 3ko8_A 79 TTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVR 158 (312)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCC
Confidence 14455777889999999999998653211 112222233 478888887654 5999
Q ss_pred EEEEeCCCccC
Q 024643 228 YTIIRTGVLQN 238 (265)
Q Consensus 228 ~tivRPg~l~~ 238 (265)
++++||+++..
T Consensus 159 ~~~lrp~~v~g 169 (312)
T 3ko8_A 159 CLAVRYANVVG 169 (312)
T ss_dssp EEEEEECEEEC
T ss_pred EEEEeeccccC
Confidence 99999998653
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.1e-17 Score=147.26 Aligned_cols=144 Identities=15% Similarity=0.231 Sum_probs=110.0
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc--CCCEEEE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~ 169 (265)
.....+|+|+||||+|+||++++++|+++|++|++++|+........ -.+++++.+|++|.+++.++++ ++|+||+
T Consensus 15 ~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 15 VPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVH 94 (330)
T ss_dssp CSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEE
Confidence 34556789999999999999999999999999999999764432111 1468899999999999999998 9999998
Q ss_pred cCc---h----------------HHHHHHHhCCCCEEEEecccccccCCCCcc-cc-----cchhHHHHHHHHHHHHHhC
Q 024643 170 PSE---G----------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ-AL-----MKGNARKLAEQDESMLMAS 224 (265)
Q Consensus 170 ~~~---~----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~-~~-----~~~~~~~~k~~~E~~l~~~ 224 (265)
+.+ . .+.+++.+.++++||++||.++|....... ++ ....+...|..+|++++..
T Consensus 95 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~ 174 (330)
T 2pzm_A 95 SAAAYKDPDDWAEDAATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS 174 (330)
T ss_dssp CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred CCccCCCccccChhHHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence 721 0 134456677899999999999886542110 10 1122335888999999888
Q ss_pred CCCEEEEeCCCcc
Q 024643 225 GIPYTIIRTGVLQ 237 (265)
Q Consensus 225 gl~~tivRPg~l~ 237 (265)
++++++|||+.+.
T Consensus 175 ~~~~~~iR~~~v~ 187 (330)
T 2pzm_A 175 DVPVVSLRLANVT 187 (330)
T ss_dssp SSCEEEEEECEEE
T ss_pred CCCEEEEeeeeeE
Confidence 9999999988754
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-18 Score=149.37 Aligned_cols=136 Identities=18% Similarity=0.207 Sum_probs=104.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc------hh---hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AM---ESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~------~~---~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
+|+|+||||||+||++++++|+++|++|++++|+... .. .+...+++++.+|++|++++.++++++|+||+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~ 83 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS 83 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence 5789999999999999999999999999999998532 11 22356899999999999999999999999998
Q ss_pred cCc-------hHHHHHHHhCC-CCEEEEecccccccCCCCcccccc-hhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 170 PSE-------GFISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMK-GNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 170 ~~~-------~~~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~-~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.+ ..+.++++++| ++|||+ |+.+..... ..+..+ ...|..|..+|+++++.+++++++|||++.
T Consensus 84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~--~~~~~p~~~~y~sK~~~e~~~~~~~~~~~~~r~~~~~ 157 (308)
T 1qyc_A 84 TVGSLQIESQVNIIKAIKEVGTVKRFFP-SEFGNDVDN--VHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA 157 (308)
T ss_dssp CCCGGGSGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTS--CCCCTTHHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred CCcchhhhhHHHHHHHHHhcCCCceEee-cccccCccc--cccCCcchhHHHHHHHHHHHHHhcCCCeEEEEeceec
Confidence 832 23667788888 999985 544322111 011111 233478899999999999999999999753
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7.1e-18 Score=152.44 Aligned_cols=137 Identities=15% Similarity=0.164 Sum_probs=105.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC----cchh---hhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK----RNAM---ESFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~----~~~~---~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~ 169 (265)
+|+|+||||||+||++++++|+++|++|++++|+. .+.. .+...+++++.+|+.|.+++.++++ ++|+||+
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~ 89 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS 89 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEE
Confidence 57899999999999999999999999999999987 2222 2234689999999999999999999 9999999
Q ss_pred cCc-------hHHHHHHHhCC-CCEEEEecccccc-cCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 170 PSE-------GFISNAGSLKG-VQHVILLSQLSVY-RGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 170 ~~~-------~~~~~aa~~~g-v~r~V~iSS~~v~-~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
+.+ ..+.+++++.| +++||+ |+.+.. ....+..+. ..+...|..+|+++++.|++++++|||++.+
T Consensus 90 ~a~~~n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~--~~y~~sK~~~e~~l~~~g~~~tivrpg~~~g 164 (346)
T 3i6i_A 90 TVGGESILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPG--LNMYREKRRVRQLVEESGIPFTYICCNSIAS 164 (346)
T ss_dssp CCCGGGGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTH--HHHHHHHHHHHHHHHHTTCCBEEEECCEESS
T ss_pred CCchhhHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCc--chHHHHHHHHHHHHHHcCCCEEEEEeccccc
Confidence 832 23667788888 999997 543321 111111111 2334588999999999999999999997644
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-17 Score=150.28 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=106.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
.+|+|+||||+|+||++++++|+++|++|++++|+..+...+. ..+++++.+|+.|++++.+++++ +|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 4689999999999999999999999999999999876543221 45789999999999999999986 8999988
Q ss_pred Cc----h------------------HHHHHHHhCC-CCEEEEecccccccCCCC---cc---cccchhHH-HHHHHHHHH
Q 024643 171 SE----G------------------FISNAGSLKG-VQHVILLSQLSVYRGSGG---IQ---ALMKGNAR-KLAEQDESM 220 (265)
Q Consensus 171 ~~----~------------------~~~~aa~~~g-v~r~V~iSS~~v~~~~~~---~~---~~~~~~~~-~~k~~~E~~ 220 (265)
.. . .+.+++...+ +++||++||.++|..... .. +..+...| ..|..+|++
T Consensus 88 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 167 (357)
T 1rkx_A 88 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV 167 (357)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred CCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHH
Confidence 32 0 0233455555 899999999998864321 11 12222233 478888887
Q ss_pred HHhC-------------CCCEEEEeCCCccC
Q 024643 221 LMAS-------------GIPYTIIRTGVLQN 238 (265)
Q Consensus 221 l~~~-------------gl~~tivRPg~l~~ 238 (265)
++.. +++++++||+++..
T Consensus 168 ~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G 198 (357)
T 1rkx_A 168 TSSYRNSFFNPANYGQHGTAVATVRAGNVIG 198 (357)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEEC
T ss_pred HHHHHHHHhhhhccccCCceEEEEeeceeeC
Confidence 7542 99999999998654
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-17 Score=148.71 Aligned_cols=136 Identities=13% Similarity=0.168 Sum_probs=104.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-chh---hhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAM---ESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~~---~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-- 172 (265)
+++|+||||||+||++++++|+++|++|++++|+.+ +.. .+...+++++.+|+.|++++.++++++|+||++.+
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~ 90 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFP 90 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchh
Confidence 458999999999999999999999999999999875 322 12345799999999999999999999999998832
Q ss_pred -----hHHHHHHHhCC-CCEEEEecccccccCC-CCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 173 -----GFISNAGSLKG-VQHVILLSQLSVYRGS-GGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 173 -----~~~~~aa~~~g-v~r~V~iSS~~v~~~~-~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.+++++++ ++|||+ |+.+..... ....+ ....|..|..+|+++++.+++++++|||++.
T Consensus 91 ~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p--~~~~y~sK~~~e~~~~~~~~~~~~lr~~~~~ 159 (318)
T 2r6j_A 91 QILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPP--FEALIERKRMIRRAIEEANIPYTYVSANCFA 159 (318)
T ss_dssp GSTTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHH--HHHHHHHHHHHHHHHHHTTCCBEEEECCEEH
T ss_pred hhHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCC--cchhHHHHHHHHHHHHhcCCCeEEEEcceeh
Confidence 23667778888 999985 443321111 11111 1223478899999999999999999999753
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.4e-17 Score=148.41 Aligned_cols=142 Identities=15% Similarity=0.119 Sum_probs=105.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCc--chhhh----cCCccEEeeeCCCCHHHHHHHHcC--CCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--NAMES----FGTYVESMAGDASNKKFLKTALRG--VRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~--~~~~~----~~~~v~~i~~D~~d~~~l~~~~~~--~d~ 166 (265)
..+|+|+||||||+||++|+++|+++| ++|++++|... ....+ ...+++++.+|+.|++.+.+++++ +|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 456899999999999999999999999 77777777542 11111 125799999999999999999987 999
Q ss_pred EEEcCc----------------------hHHHHHHHhCCCCEEEEecccccccCCCCc------ccccchhHH-HHHHHH
Q 024643 167 IICPSE----------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNAR-KLAEQD 217 (265)
Q Consensus 167 vi~~~~----------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~~~~-~~k~~~ 217 (265)
||++.. ..+.+++++.+++||||+||.++|...... .+..+...| ..|..+
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~ 181 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASA 181 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHH
Confidence 998721 014556788899999999999998754211 111222233 478888
Q ss_pred HHHHHh----CCCCEEEEeCCCccC
Q 024643 218 ESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 218 E~~l~~----~gl~~tivRPg~l~~ 238 (265)
|++++. .+++++++||+++..
T Consensus 182 E~~~~~~~~~~g~~~~ilRp~~v~G 206 (346)
T 4egb_A 182 DMIALAYYKTYQLPVIVTRCSNNYG 206 (346)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEES
T ss_pred HHHHHHHHHHhCCCEEEEeecceeC
Confidence 887765 699999999998643
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.75 E-value=2.1e-17 Score=147.09 Aligned_cols=139 Identities=11% Similarity=0.018 Sum_probs=102.6
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE 172 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~ 172 (265)
...+.++|+||||+|+||++++++|+++|++|++++|+... .. .+++++.+|++|++++.+++++ +|+||++..
T Consensus 8 ~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~ 83 (321)
T 2pk3_A 8 HHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAA 83 (321)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred cccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 44567899999999999999999999999999999998765 22 1688999999999999999986 999998721
Q ss_pred ---------h-------------HHHHHHHhC-CCCEEEEecccccccCC--C--Cc---ccccchhHH-HHHHHHHHHH
Q 024643 173 ---------G-------------FISNAGSLK-GVQHVILLSQLSVYRGS--G--GI---QALMKGNAR-KLAEQDESML 221 (265)
Q Consensus 173 ---------~-------------~~~~aa~~~-gv~r~V~iSS~~v~~~~--~--~~---~~~~~~~~~-~~k~~~E~~l 221 (265)
. .+.+++... ++++||++||.++|... . +. .+..+...| ..|..+|.++
T Consensus 84 ~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~ 163 (321)
T 2pk3_A 84 KSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLA 163 (321)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHH
T ss_pred ccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHH
Confidence 0 123345544 68999999999888643 1 00 011122223 5788888887
Q ss_pred Hh----CCCCEEEEeCCCcc
Q 024643 222 MA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~~----~gl~~tivRPg~l~ 237 (265)
+. .|++++++||+++.
T Consensus 164 ~~~~~~~gi~~~ilrp~~v~ 183 (321)
T 2pk3_A 164 RQYVKAYGMDIIHTRTFNHI 183 (321)
T ss_dssp HHHHHHHCCEEEEEEECEEE
T ss_pred HHHHHHcCCCEEEEEeCccc
Confidence 65 39999999999864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.75 E-value=1.9e-17 Score=151.51 Aligned_cols=142 Identities=9% Similarity=-0.018 Sum_probs=103.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhh-hc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAME-SF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~-~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~- 172 (265)
..+|+|+||||+|+||++++++|+++| ++|++++|+...... +. ..+++++.+|+.|++++.++++++|+||++..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~ 109 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY 109 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence 456899999999999999999999999 999999998654322 22 45789999999999999999999999998721
Q ss_pred ---h------------------HHHHHHHhC-CCCEEEEecccccccCCCC--cc--------cc-cchh-HHHHHHHHH
Q 024643 173 ---G------------------FISNAGSLK-GVQHVILLSQLSVYRGSGG--IQ--------AL-MKGN-ARKLAEQDE 218 (265)
Q Consensus 173 ---~------------------~~~~aa~~~-gv~r~V~iSS~~v~~~~~~--~~--------~~-~~~~-~~~~k~~~E 218 (265)
. .+.+++++. ++++||++||.++|..... .. +. .+.. +...|..+|
T Consensus 110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E 189 (377)
T 2q1s_A 110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGE 189 (377)
T ss_dssp SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHH
T ss_pred cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHH
Confidence 0 133456667 8999999999988753211 00 11 2222 334788888
Q ss_pred HHHHh----CCCCEEEEeCCCccC
Q 024643 219 SMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 219 ~~l~~----~gl~~tivRPg~l~~ 238 (265)
++++. .+++++++||+++..
T Consensus 190 ~~~~~~~~~~gi~~~ilRp~~v~G 213 (377)
T 2q1s_A 190 FYSVYYHKQHQLPTVRARFQNVYG 213 (377)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEEC
T ss_pred HHHHHHHHHhCCCEEEEeeccEEC
Confidence 87754 589999999998654
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=4.1e-17 Score=147.47 Aligned_cols=141 Identities=16% Similarity=0.032 Sum_probs=107.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc----hhhhc-------CCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESF-------GTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~----~~~~~-------~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
.+|+|+||||||+||++++++|+++|++|++++|+... ...+. ..+++++.+|+.|.+++.++++++|+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 46899999999999999999999999999999997642 21110 25789999999999999999999999
Q ss_pred EEEcCc--h--------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHHH
Q 024643 167 IICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDE 218 (265)
Q Consensus 167 vi~~~~--~--------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E 218 (265)
||++.. . .+.+++.+.++++||++||.++|..... . .+..+...| ..|..+|
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e 185 (352)
T 1sb8_A 106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE 185 (352)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHH
Confidence 998721 0 1334567789999999999999865421 1 011112233 4788888
Q ss_pred HHHHh----CCCCEEEEeCCCccC
Q 024643 219 SMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 219 ~~l~~----~gl~~tivRPg~l~~ 238 (265)
++++. .+++++++||+++..
T Consensus 186 ~~~~~~~~~~g~~~~ilRp~~v~G 209 (352)
T 1sb8_A 186 LYADVFSRCYGFSTIGLRYFNVFG 209 (352)
T ss_dssp HHHHHHHHHHCCCCEEEEECCEEC
T ss_pred HHHHHHHHHcCCCEEEEEECceeC
Confidence 87753 589999999998653
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=145.41 Aligned_cols=139 Identities=14% Similarity=0.038 Sum_probs=106.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----h
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-----G 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-----~ 173 (265)
+++|+||||+|+||++++++|+++|++|++++|+..+.. ..+++++.+|++|++++.++++++|+||++.. .
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~ 78 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---EAHEEIVACDLADAQAVHDLVKDCDGIIHLGGVSVERP 78 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---CTTEEECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---CCCccEEEccCCCHHHHHHHHcCCCEEEECCcCCCCCC
Confidence 358999999999999999999999999999999875431 24678999999999999999999999998721 0
Q ss_pred -------------HHHHHHHhCCCCEEEEecccccccCCCCc------ccccch-hHHHHHHHHHHHHH----hCCCCEE
Q 024643 174 -------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKG-NARKLAEQDESMLM----ASGIPYT 229 (265)
Q Consensus 174 -------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~-~~~~~k~~~E~~l~----~~gl~~t 229 (265)
.+.+++.+.+++|||++||..++...... .+..+. .+...|..+|.+++ ..+++++
T Consensus 79 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ 158 (267)
T 3ay3_A 79 WNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFDIETL 158 (267)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 13455677889999999999887543211 111111 22347777777764 4699999
Q ss_pred EEeCCCccCCC
Q 024643 230 IIRTGVLQNTP 240 (265)
Q Consensus 230 ivRPg~l~~~~ 240 (265)
++||+++.+.+
T Consensus 159 ~lrp~~v~~~~ 169 (267)
T 3ay3_A 159 NIRIGSCFPKP 169 (267)
T ss_dssp EEEECBCSSSC
T ss_pred EEeceeecCCC
Confidence 99999975444
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.7e-17 Score=148.06 Aligned_cols=137 Identities=12% Similarity=0.150 Sum_probs=103.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-c-----chhh---hcCCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-R-----NAME---SFGTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~-----~~~~---~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
++|+|+||||||+||++++++|+++|++|++++|+. . +... +...+++++.+|+.|++++.++++++|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 357899999999999999999999999999999986 2 2221 224579999999999999999999999999
Q ss_pred EcCc-------hHHHHHHHhCC-CCEEEEecccccccC-CCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 169 CPSE-------GFISNAGSLKG-VQHVILLSQLSVYRG-SGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 169 ~~~~-------~~~~~aa~~~g-v~r~V~iSS~~v~~~-~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
++.+ ..+.++++++| ++|||+ |+.+.... .....+ ....|..|..+|+++++.++++++|||+++.
T Consensus 83 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p--~~~~y~sK~~~e~~~~~~~~~~~~lrp~~~~ 157 (321)
T 3c1o_A 83 SALPFPMISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPP--FESVLEKKRIIRRAIEAAALPYTYVSANCFG 157 (321)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHH--HHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred ECCCccchhhHHHHHHHHHHhCCccEEec-cccccCccccccCCC--cchHHHHHHHHHHHHHHcCCCeEEEEeceec
Confidence 8832 23667788888 999984 43332111 011111 0223478899999999999999999999753
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=7.4e-17 Score=146.39 Aligned_cols=136 Identities=18% Similarity=0.221 Sum_probs=107.8
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC-CC-eEEEEEeCCcchhhh----cCCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVK-RT-RIKALVKDKRNAMES----FGTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~-~V~~~~R~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
....+|+|+||||||+||++++++|+++ |+ +|++++|++.+...+ ...+++++.+|++|.+++.++++++|+||
T Consensus 17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence 3455789999999999999999999999 97 999999987654332 23578999999999999999999999999
Q ss_pred EcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHh---
Q 024643 169 CPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--- 223 (265)
Q Consensus 169 ~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~--- 223 (265)
++.+ . .+.+++...++++||++||..++.+. ..+...|..+|.+++.
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~p~--------~~Y~~sK~~~E~~~~~~~~ 168 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAANPI--------NLYGATKLCSDKLFVSANN 168 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSSCC--------SHHHHHHHHHHHHHHHGGG
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCc--------cHHHHHHHHHHHHHHHHHH
Confidence 8721 0 13455777899999999998765321 1223478888888764
Q ss_pred ----CCCCEEEEeCCCccC
Q 024643 224 ----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 224 ----~gl~~tivRPg~l~~ 238 (265)
.+++++++|||.+..
T Consensus 169 ~~~~~g~~~~~vRpg~v~g 187 (344)
T 2gn4_A 169 FKGSSQTQFSVVRYGNVVG 187 (344)
T ss_dssp CCCSSCCEEEEECCCEETT
T ss_pred HhCCCCcEEEEEEeccEEC
Confidence 579999999998654
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.8e-17 Score=145.96 Aligned_cols=141 Identities=15% Similarity=0.097 Sum_probs=108.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHH--CCCeEEEEEeCCc-------------chhhhcCCccEEeeeCCCCHHHHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIV--KRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTA 160 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~--~G~~V~~~~R~~~-------------~~~~~~~~~v~~i~~D~~d~~~l~~~ 160 (265)
...+|+|+||||+||||++++++|++ +|++|++++|+.. ......+..++++.+|++|++++.++
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 86 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL 86 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence 34578999999999999999999999 9999999999664 22223455789999999999999998
Q ss_pred -HcCCCEEEEcCc--h------------------HHHHHHHhCCCCEEEEecccccccCCCCc----ccccchhHH-HHH
Q 024643 161 -LRGVRSIICPSE--G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QALMKGNAR-KLA 214 (265)
Q Consensus 161 -~~~~d~vi~~~~--~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----~~~~~~~~~-~~k 214 (265)
..++|+||++.. . .+.+++++.+++ ||++||.++|...... .+..+...| ..|
T Consensus 87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK 165 (362)
T 3sxp_A 87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENVYGFSK 165 (362)
T ss_dssp TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHH
T ss_pred hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHH
Confidence 889999998721 0 144557777876 9999999988654321 111222233 588
Q ss_pred HHHHHHHHhCC--CCEEEEeCCCcc
Q 024643 215 EQDESMLMASG--IPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~g--l~~tivRPg~l~ 237 (265)
..+|++++... ++++++||+.+.
T Consensus 166 ~~~E~~~~~~~~~~~~~~lR~~~v~ 190 (362)
T 3sxp_A 166 LCMDEFVLSHSNDNVQVGLRYFNVY 190 (362)
T ss_dssp HHHHHHHHHTTTTSCEEEEEECSEE
T ss_pred HHHHHHHHHHhccCCEEEEEeCcee
Confidence 89999988754 889999999764
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.4e-17 Score=146.47 Aligned_cols=133 Identities=16% Similarity=0.164 Sum_probs=106.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC-CCEEEEcCc-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG-VRSIICPSE----- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~-~d~vi~~~~----- 172 (265)
+|+|+||| +|+||++|+++|+++|++|++++|+.++. ..+++++.+|+.|++++.+++++ +|+||++..
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~~~~ 77 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYS 77 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEECHHHHHHC
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEEeCCCCCCC
Confidence 57899999 59999999999999999999999987653 46789999999999999999988 999998721
Q ss_pred ------------hHHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHHhCCCCEEEEeCC
Q 024643 173 ------------GFISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLMASGIPYTIIRTG 234 (265)
Q Consensus 173 ------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~~~gl~~tivRPg 234 (265)
..+.+++++.+++||||+||.++|...... .+..+...| ..|..+|++ .+. ++++++||+
T Consensus 78 ~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~-~~~~ilR~~ 155 (286)
T 3gpi_A 78 DEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA-YSSTILRFS 155 (286)
T ss_dssp -----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-SSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-CCeEEEecc
Confidence 124555677889999999999998654321 112222333 588899999 777 999999999
Q ss_pred CccC
Q 024643 235 VLQN 238 (265)
Q Consensus 235 ~l~~ 238 (265)
++..
T Consensus 156 ~v~G 159 (286)
T 3gpi_A 156 GIYG 159 (286)
T ss_dssp EEEB
T ss_pred cccC
Confidence 8653
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=8.9e-18 Score=141.01 Aligned_cols=128 Identities=16% Similarity=0.169 Sum_probs=104.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--h
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--G 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~ 173 (265)
++|+|+||||+|+||++++++|+++|+ +|++++|++.+ ...+++++.+|+.|++++.+++ +|+||++.+ .
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC--CSEEEECCCCCH
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh--hcEEEECeeecc
Confidence 467999999999999999999999998 99999998765 2357888999999998888777 999998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCC-EEEEeCC
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 234 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~-~tivRPg 234 (265)
.+.+++++.++++||++||.+++..+. ..+...|..+|++++..+++ ++++|||
T Consensus 78 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~-------~~y~~sK~~~e~~~~~~~~~~~~~vrp~ 150 (215)
T 2a35_A 78 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS-------IFYNRVKGELEQALQEQGWPQLTIARPS 150 (215)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS-------SHHHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCCCCc-------cHHHHHHHHHHHHHHHcCCCeEEEEeCc
Confidence 133456778899999999998875321 12335888999999999999 9999999
Q ss_pred CccC
Q 024643 235 VLQN 238 (265)
Q Consensus 235 ~l~~ 238 (265)
++..
T Consensus 151 ~v~g 154 (215)
T 2a35_A 151 LLFG 154 (215)
T ss_dssp SEES
T ss_pred eeeC
Confidence 8754
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=6e-17 Score=145.73 Aligned_cols=138 Identities=16% Similarity=0.139 Sum_probs=103.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCc-----chhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKR-----NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~-----~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+|+|+||||+||||++++++|+++ |++|++++|+.. ....+...+++++.+|++|++++.++++++|+|||+.
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 478999999999999999999999 899999999652 1222234578999999999999999999999999882
Q ss_pred ch----------------------HHHHHHHhCCCCEEEEecccccccCCCC--------------c---ccccchhHH-
Q 024643 172 EG----------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--------------I---QALMKGNAR- 211 (265)
Q Consensus 172 ~~----------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--------------~---~~~~~~~~~- 211 (265)
.. .+.+++...++ +|||+||.++|..... . .+..+...|
T Consensus 84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~ 162 (348)
T 1oc2_A 84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 162 (348)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccH
Confidence 10 13344666677 9999999988754311 0 011122233
Q ss_pred HHHHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
..|..+|.+++. .+++++++||+.+.
T Consensus 163 ~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~ 192 (348)
T 1oc2_A 163 STKAASDLIVKAWVRSFGVKATISNCSNNY 192 (348)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeceee
Confidence 478888887754 58999999999864
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.73 E-value=1.1e-16 Score=143.77 Aligned_cols=142 Identities=9% Similarity=0.090 Sum_probs=105.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-hcC-CccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SFG-TYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-~~~-~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
....+|+|+||||+|+||++++++|+++|++|++++|+...... +.. .+++++.+|++|++++.+++++ +|+||++
T Consensus 17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEEC
Confidence 34457899999999999999999999999999999998643222 111 4788999999999999999988 9999987
Q ss_pred C----c----h-----------HHHHHHHhCCCCEEEEeccccccc----CCCC-cccc-cc--hhHHHHHHHHHHHHHh
Q 024643 171 S----E----G-----------FISNAGSLKGVQHVILLSQLSVYR----GSGG-IQAL-MK--GNARKLAEQDESMLMA 223 (265)
Q Consensus 171 ~----~----~-----------~~~~aa~~~gv~r~V~iSS~~v~~----~~~~-~~~~-~~--~~~~~~k~~~E~~l~~ 223 (265)
. . . .+.+++...++++||++||.++|. .... .... .+ ..+...|..+|++++.
T Consensus 97 A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~ 176 (333)
T 2q1w_A 97 AASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEY 176 (333)
T ss_dssp CCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHH
T ss_pred ceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHh
Confidence 2 1 0 134556778899999999999886 3211 0000 11 2233588899999988
Q ss_pred -CCCCEEEEeCCCcc
Q 024643 224 -SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 -~gl~~tivRPg~l~ 237 (265)
.. +++++||+.+.
T Consensus 177 s~~-~~~ilR~~~v~ 190 (333)
T 2q1w_A 177 SGL-DFVTFRLANVV 190 (333)
T ss_dssp HTC-CEEEEEESEEE
T ss_pred hhC-CeEEEeeceEE
Confidence 66 99999999754
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.73 E-value=7.3e-17 Score=144.77 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=103.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-c----hhhhc-CCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-N----AMESF-GTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~----~~~~~-~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
+|+|+||||+||||++++++|+++|++|++++|+.. . ...+. ..+++++.+|++|++++.+++++ +|+||++
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 368999999999999999999999999999998532 1 11121 23589999999999999999988 9999987
Q ss_pred Cch----------------------HHHHHHHhCCCC-EEEEecccccccCCCCc---------------------cccc
Q 024643 171 SEG----------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI---------------------QALM 206 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~gv~-r~V~iSS~~v~~~~~~~---------------------~~~~ 206 (265)
... .+.+++...+++ +||++||.++|...... .+..
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~ 160 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLD 160 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCC
Confidence 210 133446667775 99999999987642110 0111
Q ss_pred chhHH-HHHHHHHHHHHh----CCCCEEEEeCCCccC
Q 024643 207 KGNAR-KLAEQDESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 207 ~~~~~-~~k~~~E~~l~~----~gl~~tivRPg~l~~ 238 (265)
+...| ..|..+|++++. .|++++++||+++..
T Consensus 161 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g 197 (347)
T 1orr_A 161 FHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYG 197 (347)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeC
Confidence 22333 578888888765 489999999998643
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.72 E-value=3.1e-17 Score=145.26 Aligned_cols=138 Identities=13% Similarity=0.062 Sum_probs=105.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE-- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~-- 172 (265)
+|+|+||||+|+||++++++|+++ |++|++++|+..+.. . ..+++++.+|+.|.+++.++++ ++|+|||+..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 79 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-V-VNSGPFEVVNALDFNQIEHLVEVHKITDIYLMAALL 79 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-H-HHSSCEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-c-cCCCceEEecCCCHHHHHHHHhhcCCCEEEECCccC
Confidence 478999999999999999999999 899999999876532 1 1357889999999999999998 8999998821
Q ss_pred h-------------------HHHHHHHhCCCCEEEEecccccccCCCC---c---ccccchhHH-HHHHHHHHHHHh---
Q 024643 173 G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGG---I---QALMKGNAR-KLAEQDESMLMA--- 223 (265)
Q Consensus 173 ~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~---~---~~~~~~~~~-~~k~~~E~~l~~--- 223 (265)
. .+.+++++.++++|||+||.++|..... . .+..+...| ..|..+|++++.
T Consensus 80 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~ 159 (312)
T 2yy7_A 80 SATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHN 159 (312)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHH
Confidence 0 1344567788999999999998865321 0 111122223 478888877653
Q ss_pred -CCCCEEEEeCCCccC
Q 024643 224 -SGIPYTIIRTGVLQN 238 (265)
Q Consensus 224 -~gl~~tivRPg~l~~ 238 (265)
.+++++++||+++..
T Consensus 160 ~~~~~~~~lrp~~v~g 175 (312)
T 2yy7_A 160 IYGVDVRSIRYPGLIS 175 (312)
T ss_dssp HHCCEEECEEECEEEC
T ss_pred hcCCcEEEEeCCeEec
Confidence 589999999998654
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=6.6e-17 Score=143.58 Aligned_cols=138 Identities=18% Similarity=0.169 Sum_probs=102.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc----h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE----G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~----~ 173 (265)
|+|+||||+||||++++++|+++|++|++++|...........+++++.+|++|++++.++++ ++|+||++.. .
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 80 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPKGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASVK 80 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCTTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcccCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCch
Confidence 689999999999999999999999999999985432222223567889999999999999998 8999998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEeccc-ccccC-CC--Cc---ccccchhHH-HHHHHHHHHHHh----
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQL-SVYRG-SG--GI---QALMKGNAR-KLAEQDESMLMA---- 223 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~-~v~~~-~~--~~---~~~~~~~~~-~~k~~~E~~l~~---- 223 (265)
.+.+++++.++++||++||. .+|.. .. +. .+..+...| ..|..+|++++.
T Consensus 81 ~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 160 (311)
T 2p5y_A 81 VSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQS 160 (311)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 13345677889999999998 66643 11 11 111122223 578888887753
Q ss_pred CCCCEEEEeCCCcc
Q 024643 224 SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ~gl~~tivRPg~l~ 237 (265)
.+++++++||+.+.
T Consensus 161 ~~~~~~~lrp~~v~ 174 (311)
T 2p5y_A 161 YGLKWVSLRYGNVY 174 (311)
T ss_dssp HCCCEEEEEECEEE
T ss_pred cCCCEEEEeecccc
Confidence 68999999999754
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=142.78 Aligned_cols=138 Identities=20% Similarity=0.190 Sum_probs=103.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC---C---CeEEEEEeCCc-----chhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK---R---TRIKALVKDKR-----NAMESF-GTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~---G---~~V~~~~R~~~-----~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
|+|+||||+|+||++++++|+++ | ++|++++|+.. ....+. ..+++++.+|++|++++.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 68999999999999999999997 8 99999999642 122221 357899999999999999999999999
Q ss_pred EEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchh-HHHHHHHHHH
Q 024643 168 ICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGN-ARKLAEQDES 219 (265)
Q Consensus 168 i~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~-~~~~k~~~E~ 219 (265)
||+.. . .+.+++...+++|||++||.++|..... . .+..+.. +...|..+|+
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 160 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHH
Confidence 98821 0 1344567788999999999988764311 0 1111222 3347888888
Q ss_pred HHHh----CCCCEEEEeCCCcc
Q 024643 220 MLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l~~----~gl~~tivRPg~l~ 237 (265)
+++. .+++++++||+++.
T Consensus 161 ~~~~~~~~~g~~~~ilrp~~v~ 182 (337)
T 1r6d_A 161 VARAYHRTYGLDVRITRCCNNY 182 (337)
T ss_dssp HHHHHHHHHCCCEEEEEECEEE
T ss_pred HHHHHHHHHCCCEEEEEeeeeE
Confidence 7653 58999999999854
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=4.7e-17 Score=144.67 Aligned_cols=138 Identities=17% Similarity=0.119 Sum_probs=100.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~----- 173 (265)
+|+|+||||+||||++++++|+++| +++++++............++++.+|+.| +++.++++++|+||++...
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~ 78 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRI 78 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhh
Confidence 3689999999999999999999999 45555544333233345678999999999 9999999999999987210
Q ss_pred -----------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHHh----CCC
Q 024643 174 -----------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLMA----SGI 226 (265)
Q Consensus 174 -----------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~~----~gl 226 (265)
.+.+++++.++++||++||.++|...... .+..+...| ..|..+|.+++. .++
T Consensus 79 ~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~g~ 158 (313)
T 3ehe_A 79 GAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTFDM 158 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 13455777889999999999998643211 122222333 478888877653 699
Q ss_pred CEEEEeCCCccC
Q 024643 227 PYTIIRTGVLQN 238 (265)
Q Consensus 227 ~~tivRPg~l~~ 238 (265)
+++++||+.+..
T Consensus 159 ~~~ilRp~~v~G 170 (313)
T 3ehe_A 159 QAWIYRFANVIG 170 (313)
T ss_dssp EEEEEECSCEES
T ss_pred CEEEEeeccccC
Confidence 999999998753
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-16 Score=143.78 Aligned_cols=139 Identities=18% Similarity=0.133 Sum_probs=103.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc----------hhhh---cCCccEEeeeCCCCHHHHHHHHc--C
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----------AMES---FGTYVESMAGDASNKKFLKTALR--G 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~----------~~~~---~~~~v~~i~~D~~d~~~l~~~~~--~ 163 (265)
+|+|+||||+|+||++++++|+++|++|++++|+... ...+ .+.+++++.+|++|++++.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 5799999999999999999999999999999986432 1111 24578999999999999999998 8
Q ss_pred CCEEEEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccc--hhHHHHH
Q 024643 164 VRSIICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMK--GNARKLA 214 (265)
Q Consensus 164 ~d~vi~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~--~~~~~~k 214 (265)
+|+||++.. . .+.+++++.++++||++||.++|..... . .+..+ ..+...|
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK 161 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK 161 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHH
Confidence 999998721 0 1334567788999999999998864211 0 11111 2233578
Q ss_pred HHHHHHHHh---CC--CCEEEEeCCCcc
Q 024643 215 EQDESMLMA---SG--IPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~---~g--l~~tivRPg~l~ 237 (265)
..+|++++. .+ ++++++||+.+.
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~ 189 (348)
T 1ek6_A 162 FFIEEMIRDLCQADKTWNAVLLRYFNPT 189 (348)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECEEE
T ss_pred HHHHHHHHHHHhcCCCcceEEEeecccc
Confidence 888887754 24 999999999754
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.72 E-value=9.3e-17 Score=143.74 Aligned_cols=147 Identities=12% Similarity=0.022 Sum_probs=103.9
Q ss_pred CCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-----hhh-cCCccEEeeeCCCCHHHHHHHHcC-
Q 024643 91 EDEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MES-FGTYVESMAGDASNKKFLKTALRG- 163 (265)
Q Consensus 91 ~~~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~-~~~~v~~i~~D~~d~~~l~~~~~~- 163 (265)
++.....++|+||||||+|+||++++++|+++|++|++++|+..+. ..+ ...+++++.+|++|++++.+++++
T Consensus 6 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 85 (335)
T 1rpn_A 6 HHHHHGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA 85 (335)
T ss_dssp ---------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc
Confidence 3445667789999999999999999999999999999999987542 111 134688999999999999999986
Q ss_pred -CCEEEEcCc----h------------------HHHHHHHhCCC-CEEEEecccccccCCCC--c---ccccchh-HHHH
Q 024643 164 -VRSIICPSE----G------------------FISNAGSLKGV-QHVILLSQLSVYRGSGG--I---QALMKGN-ARKL 213 (265)
Q Consensus 164 -~d~vi~~~~----~------------------~~~~aa~~~gv-~r~V~iSS~~v~~~~~~--~---~~~~~~~-~~~~ 213 (265)
+|+||++.. . .+.+++++.++ ++||++||.++|..... . .+..+.. +...
T Consensus 86 ~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~s 165 (335)
T 1rpn_A 86 QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVA 165 (335)
T ss_dssp CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHH
Confidence 699998721 0 13345666786 89999999998865322 0 1111222 3357
Q ss_pred HHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
|..+|.+++. .+++++++||+.+.
T Consensus 166 K~~~e~~~~~~~~~~~~~~~i~r~~~v~ 193 (335)
T 1rpn_A 166 KLYGHWITVNYRESFGLHASSGILFNHE 193 (335)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEeeCccc
Confidence 8888887754 48999999998753
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=1.3e-16 Score=146.25 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=104.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeCCcc---------hhhh-------c----CCc---cEEeeeCCCCH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRN---------AMES-------F----GTY---VESMAGDASNK 154 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll-~~G~~V~~~~R~~~~---------~~~~-------~----~~~---v~~i~~D~~d~ 154 (265)
+|+|+||||+||||++++++|+ ++|++|++++|+... ...+ . ..+ ++++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4799999999999999999999 999999999997643 1222 0 124 89999999999
Q ss_pred HHHHHHHc--C-CCEEEEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--------
Q 024643 155 KFLKTALR--G-VRSIICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG-------- 201 (265)
Q Consensus 155 ~~l~~~~~--~-~d~vi~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~-------- 201 (265)
+++.++++ + +|+|||+.. . .+.+++++.++++||++||.++|.....
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~ 161 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccccc
Confidence 99999997 6 999998721 0 1334567788999999999988754320
Q ss_pred -c---ccccchh-HHHHHHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 202 -I---QALMKGN-ARKLAEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 202 -~---~~~~~~~-~~~~k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
. .+..+.. +...|..+|.+++. .+++++++||+++.
T Consensus 162 ~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~ 206 (397)
T 1gy8_A 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC 206 (397)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred CcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEecccee
Confidence 0 0111122 33578888887754 49999999999864
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-16 Score=142.85 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=103.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhc-CCccEEeeeCCCCH-HHHHHHHcCCCEEEEcC---ch
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESF-GTYVESMAGDASNK-KFLKTALRGVRSIICPS---EG 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~-~~l~~~~~~~d~vi~~~---~~ 173 (265)
|+|+||||||+||++++++|+++ |++|++++|+..+...+. ..+++++.+|+.|. +.+.++++++|+|||+. ..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~ 80 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence 68999999999999999999998 899999999987655432 35789999999984 67888999999999871 10
Q ss_pred -------------------HHHHHHHhCCCCEEEEecccccccCCCCc--c---------cc-cchhHH-HHHHHHHHHH
Q 024643 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q---------AL-MKGNAR-KLAEQDESML 221 (265)
Q Consensus 174 -------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--~---------~~-~~~~~~-~~k~~~E~~l 221 (265)
.+.+++++.+ ++|||+||.++|...... . +. .+...| ..|..+|+++
T Consensus 81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~ 159 (345)
T 2bll_A 81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (345)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHH
Confidence 1334566677 899999999988643211 0 00 111233 4788888877
Q ss_pred H----hCCCCEEEEeCCCcc
Q 024643 222 M----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~----~~gl~~tivRPg~l~ 237 (265)
+ +.+++++++||+.+.
T Consensus 160 ~~~~~~~~~~~~ilrp~~v~ 179 (345)
T 2bll_A 160 WAYGEKEGLQFTLFRPFNWM 179 (345)
T ss_dssp HHHHHHHCCCEEEEEECSEE
T ss_pred HHHHHhcCCCEEEEcCCccc
Confidence 4 369999999999864
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.2e-16 Score=141.40 Aligned_cols=139 Identities=16% Similarity=0.135 Sum_probs=102.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCc--chhhh---c-CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--NAMES---F-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~--~~~~~---~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|+||||+||||++++++|+++| ++|++++|+.. ..+.+ . ..+++++.+|++|.+++.+++.++|+|||+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4789999999999999999999997 89999998642 11211 1 347899999999999999999999999988
Q ss_pred Cch----------------------HHHHHHHhCCC-CEEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHH
Q 024643 171 SEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESML 221 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~gv-~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l 221 (265)
... .+.+++...+. +|||++||.++|..... . .+..+...| ..|..+|+++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 162 (336)
T 2hun_A 83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLV 162 (336)
T ss_dssp CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHH
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHH
Confidence 210 12334555554 79999999988764311 0 111122233 4788888877
Q ss_pred Hh----CCCCEEEEeCCCcc
Q 024643 222 MA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~~----~gl~~tivRPg~l~ 237 (265)
+. .+++++++||+.+.
T Consensus 163 ~~~~~~~~~~~~ilrp~~v~ 182 (336)
T 2hun_A 163 LGWTRTYNLNASITRCTNNY 182 (336)
T ss_dssp HHHHHHTTCEEEEEEECEEE
T ss_pred HHHHHHhCCCEEEEeeeeee
Confidence 54 69999999999864
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.3e-16 Score=146.36 Aligned_cols=141 Identities=20% Similarity=0.161 Sum_probs=102.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-----------------h------hcCCccEEeeeCCCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----------------E------SFGTYVESMAGDASN 153 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-----------------~------~~~~~v~~i~~D~~d 153 (265)
..+++||||||+||||++++++|+++|++|++++|...... . ....+++++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 35789999999999999999999999999999998643210 0 124578999999999
Q ss_pred HHHHHHHHcC--CCEEEEcCc----h-----------H----------HHHHHHhCCC-CEEEEecccccccCCCCc---
Q 024643 154 KKFLKTALRG--VRSIICPSE----G-----------F----------ISNAGSLKGV-QHVILLSQLSVYRGSGGI--- 202 (265)
Q Consensus 154 ~~~l~~~~~~--~d~vi~~~~----~-----------~----------~~~aa~~~gv-~r~V~iSS~~v~~~~~~~--- 202 (265)
++++.+++++ +|+|||+.+ . . +.+++++.++ ++||++||.++|......
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E 168 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE 168 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCc
Confidence 9999999988 999998721 0 0 2234566677 599999999888643210
Q ss_pred ---------------ccccchhHH-HHHHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 203 ---------------QALMKGNAR-KLAEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 203 ---------------~~~~~~~~~-~~k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
.+..+...| ..|..+|++++. .|++++++||+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~ 223 (404)
T 1i24_A 169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVY 223 (404)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred cccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceee
Confidence 011122233 477788887654 49999999999864
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.70 E-value=6.5e-17 Score=144.66 Aligned_cols=142 Identities=10% Similarity=0.053 Sum_probs=104.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEe-eeCCCCHHHHHHHHcCCCEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESM-AGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i-~~D~~d~~~l~~~~~~~d~v 167 (265)
...+|+|+||||+||||++++++|+++|++|++++|+..+...+ .+.+++++ .+|++|.+++.++++++|+|
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 34578999999999999999999999999999999987654322 13568888 89999999999999999999
Q ss_pred EEcCc------h-------------HHHHHHH-hCCCCEEEEecccccccCCCC------cc------------------
Q 024643 168 ICPSE------G-------------FISNAGS-LKGVQHVILLSQLSVYRGSGG------IQ------------------ 203 (265)
Q Consensus 168 i~~~~------~-------------~~~~aa~-~~gv~r~V~iSS~~v~~~~~~------~~------------------ 203 (265)
||+.. . .+.+++. ..+++|||++||.+++..... ..
T Consensus 88 ih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 167 (342)
T 1y1p_A 88 AHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPES 167 (342)
T ss_dssp EECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTT
T ss_pred EEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccccc
Confidence 98721 0 1334455 367899999999988742210 00
Q ss_pred -cccchhHH-HHHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 204 -ALMKGNAR-KLAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 204 -~~~~~~~~-~~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
+..+...| ..|..+|.+++. .+++++++||+++.
T Consensus 168 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~ 209 (342)
T 1y1p_A 168 DPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTI 209 (342)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEE
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceE
Confidence 01112223 478888887754 27899999999854
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-16 Score=143.33 Aligned_cols=140 Identities=15% Similarity=0.182 Sum_probs=99.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch---hhh--cC---CccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA---MES--FG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~---~~~--~~---~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++||||||+||||++++++|+++|++|++++|+.... ..+ .. .+++++.+|++|++++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 467899999999999999999999999999999987632 111 11 2578999999999999999999999998
Q ss_pred cCc--------h---H----------HHHHHHhCC-CCEEEEecccccccCCCC----cc-----c------c-cch-hH
Q 024643 170 PSE--------G---F----------ISNAGSLKG-VQHVILLSQLSVYRGSGG----IQ-----A------L-MKG-NA 210 (265)
Q Consensus 170 ~~~--------~---~----------~~~aa~~~g-v~r~V~iSS~~v~~~~~~----~~-----~------~-~~~-~~ 210 (265)
+.. . . +.+++.+.+ ++||||+||.+++..... .. + . .+. .+
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY 163 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence 721 0 0 233455556 899999999874322110 00 0 0 011 23
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
...|..+|.++. ..|++++++||+.+.
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~ 194 (337)
T 2c29_D 164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVV 194 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEECEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceE
Confidence 347777887653 369999999999864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=140.55 Aligned_cols=139 Identities=19% Similarity=0.188 Sum_probs=97.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcc---hhhh--cC---CccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRN---AMES--FG---TYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~---~~~~--~~---~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
+++|+||||+||||++++++|+++|++|++++| +.+. ...+ .. .+++++.+|++|++++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999998 6532 1111 11 2478899999999999999999999998
Q ss_pred cCc--h---------H----------HHHHHHhC-CCCEEEEecccccccCCCC----cc-----------cccch--hH
Q 024643 170 PSE--G---------F----------ISNAGSLK-GVQHVILLSQLSVYRGSGG----IQ-----------ALMKG--NA 210 (265)
Q Consensus 170 ~~~--~---------~----------~~~aa~~~-gv~r~V~iSS~~v~~~~~~----~~-----------~~~~~--~~ 210 (265)
+.. . . +.+++.+. +++|||++||.+++..... .. +..+. .+
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y 160 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNY 160 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccH
Confidence 721 0 1 22335555 7899999999875322110 00 00111 23
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~----~~gl~~tivRPg~l~ 237 (265)
...|..+|.++. ..|++++++||+++.
T Consensus 161 ~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~ 191 (322)
T 2p4h_X 161 AVSKTLAEKAVLEFGEQNGIDVVTLILPFIV 191 (322)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEcCCceE
Confidence 347777777654 379999999999864
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=3.4e-16 Score=141.50 Aligned_cols=138 Identities=12% Similarity=0.105 Sum_probs=102.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCc--chhhh----cCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKR--NAMES----FGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~--~~~~~----~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|+|+||||+||||++++++|+++ |++|++++|+.. ..+.+ ...+++++.+|++|.+++.++++ ++|+|||+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 57999999999999999999998 799999999652 22221 13468999999999999999998 89999988
Q ss_pred Cch----------------------HHHHHHHhC--CCC-------EEEEecccccccCCCC------------c---cc
Q 024643 171 SEG----------------------FISNAGSLK--GVQ-------HVILLSQLSVYRGSGG------------I---QA 204 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~--gv~-------r~V~iSS~~v~~~~~~------------~---~~ 204 (265)
... .+.+++... +++ +||++||.++|..... . .+
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~ 160 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCC
Confidence 210 123345555 777 9999999988754321 0 01
Q ss_pred ccchhHH-HHHHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 205 LMKGNAR-KLAEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~~-~~k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
..+...| ..|..+|.+++. .+++++++||+++.
T Consensus 161 ~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~ 198 (361)
T 1kew_A 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNY 198 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeE
Confidence 1222233 578888887754 48999999999864
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=141.08 Aligned_cols=130 Identities=13% Similarity=0.110 Sum_probs=87.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCch---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSEG--- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~~--- 173 (265)
+|+|+||||||+||++++++|+++|++|++++|+... .+ ++.+|++|++++.+++++ +|+|||+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~ 73 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRP 73 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC-----
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEEEECCcccCh
Confidence 5799999999999999999999999999999987643 12 788999999999999885 8999987210
Q ss_pred -------------------HHHHHHHhCCCCEEEEecccccccCCCCc----ccccchh-HHHHHHHHHHHHHhCCCCEE
Q 024643 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QALMKGN-ARKLAEQDESMLMASGIPYT 229 (265)
Q Consensus 174 -------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----~~~~~~~-~~~~k~~~E~~l~~~gl~~t 229 (265)
.+.+++.+.++ +||++||..+|...... .+..+.. +...|..+|++++..+++++
T Consensus 74 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~ 152 (315)
T 2ydy_A 74 DVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGAA 152 (315)
T ss_dssp --------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTCE
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCeE
Confidence 13445666676 99999999988652110 0111222 33588999999998889999
Q ss_pred EEeCCCcc
Q 024643 230 IIRTGVLQ 237 (265)
Q Consensus 230 ivRPg~l~ 237 (265)
++||+.+.
T Consensus 153 ~lR~~~v~ 160 (315)
T 2ydy_A 153 VLRIPILY 160 (315)
T ss_dssp EEEECSEE
T ss_pred EEeeeeee
Confidence 99999876
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-16 Score=132.56 Aligned_cols=135 Identities=15% Similarity=0.098 Sum_probs=96.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
++++|+||||+|+||++++++|+++|++|++++|+.++.+... ..++.++.+|++|.+++.++++ .+|++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578999999999999999999999999999999876654332 1268899999999998887764 689999
Q ss_pred EcCc-----h-------------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSE-----G-------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~-----~-------------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+ . .+...+++.+.++||++||..++.+..+...|. ..|...+
T Consensus 84 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~-----~sK~a~~ 158 (234)
T 2ehd_A 84 NNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYN-----ASKFGLL 158 (234)
T ss_dssp ECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHH-----HHHHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhh-----HHHHHHH
Confidence 8721 0 012224567788999999998775443322222 2343333
Q ss_pred H-------HHHhCCCCEEEEeCCCcc
Q 024643 219 S-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~-------~l~~~gl~~tivRPg~l~ 237 (265)
. .+...|+++++||||++.
T Consensus 159 ~~~~~la~e~~~~gi~v~~v~Pg~v~ 184 (234)
T 2ehd_A 159 GLAGAAMLDLREANVRVVNVLPGSVD 184 (234)
T ss_dssp HHHHHHHHHHGGGTEEEEEEECC---
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence 3 334579999999999874
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.68 E-value=5e-16 Score=146.98 Aligned_cols=143 Identities=17% Similarity=0.225 Sum_probs=109.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC---CCeEEEEEeCCcchhh---------------------hcCCccEEeeeCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVK---RTRIKALVKDKRNAME---------------------SFGTYVESMAGDA 151 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~---G~~V~~~~R~~~~~~~---------------------~~~~~v~~i~~D~ 151 (265)
...+|+|+||||||+||++++++|+++ |++|++++|+...... ....+++++.+|+
T Consensus 70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl 149 (478)
T 4dqv_A 70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK 149 (478)
T ss_dssp CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence 445789999999999999999999999 9999999998754211 1235799999999
Q ss_pred C------CHHHHHHHHcCCCEEEEcCch------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----
Q 024643 152 S------NKKFLKTALRGVRSIICPSEG------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----- 202 (265)
Q Consensus 152 ~------d~~~l~~~~~~~d~vi~~~~~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----- 202 (265)
+ |.+.+.++++++|+||++... .+.+++.+.++++|||+||.++|......
T Consensus 150 ~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~ 229 (478)
T 4dqv_A 150 SEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTED 229 (478)
T ss_dssp TSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred CCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCc
Confidence 8 778899999999999987210 14556777889999999999887643211
Q ss_pred ---ccccc---------hhHHHHHHHHHHHHHh----CCCCEEEEeCCCccC
Q 024643 203 ---QALMK---------GNARKLAEQDESMLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 203 ---~~~~~---------~~~~~~k~~~E~~l~~----~gl~~tivRPg~l~~ 238 (265)
.+..+ ..+...|..+|+++++ .|++++++|||++..
T Consensus 230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G 281 (478)
T 4dqv_A 230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILA 281 (478)
T ss_dssp SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEEC
T ss_pred ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeC
Confidence 11111 1134588888888765 599999999998754
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.68 E-value=3.1e-16 Score=137.82 Aligned_cols=129 Identities=17% Similarity=0.171 Sum_probs=97.7
Q ss_pred CCCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 93 ~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
.....+.++|+|||||||||++++++|+++|++|++++|+ .+|+.|++++.++++ ++|+||++
T Consensus 6 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~Dl~d~~~~~~~~~~~~~d~vih~ 70 (292)
T 1vl0_A 6 IHHHHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------DLDITNVLAVNKFFNEKKPNVVINC 70 (292)
T ss_dssp ------CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------TCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred cccccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------cCCCCCHHHHHHHHHhcCCCEEEEC
Confidence 4455667899999999999999999999999999999986 379999999999998 79999987
Q ss_pred Cc--h--------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccch-hHHHHHHHHHHHHH
Q 024643 171 SE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKG-NARKLAEQDESMLM 222 (265)
Q Consensus 171 ~~--~--------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~-~~~~~k~~~E~~l~ 222 (265)
.. . .+.++++..++ |||++||.++|..... . .+..+. .+...|..+|++++
T Consensus 71 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 149 (292)
T 1vl0_A 71 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVK 149 (292)
T ss_dssp CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 21 0 13344666777 9999999988865321 1 011112 23358899999999
Q ss_pred hCCCCEEEEeCCCcc
Q 024643 223 ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 ~~gl~~tivRPg~l~ 237 (265)
..+.+++++||+.+.
T Consensus 150 ~~~~~~~~lR~~~v~ 164 (292)
T 1vl0_A 150 ALNPKYYIVRTAWLY 164 (292)
T ss_dssp HHCSSEEEEEECSEE
T ss_pred hhCCCeEEEeeeeee
Confidence 888899999999976
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.67 E-value=7.9e-17 Score=144.52 Aligned_cols=139 Identities=14% Similarity=0.163 Sum_probs=96.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh------hh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------ES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~------~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+|+||||||+||||++|+++|+++|++|++++|+.++.. .+ ...+++++.+|++|++++.++++++|+|||+.
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 689999999999999999999999999999999865321 11 12468899999999999999999999999861
Q ss_pred c-------h----H----------HHHHHHhCC-CCEEEEeccccccc-C--CC---Ccc-----------cccc-h-hH
Q 024643 172 E-------G----F----------ISNAGSLKG-VQHVILLSQLSVYR-G--SG---GIQ-----------ALMK-G-NA 210 (265)
Q Consensus 172 ~-------~----~----------~~~aa~~~g-v~r~V~iSS~~v~~-~--~~---~~~-----------~~~~-~-~~ 210 (265)
. . . +.+++.+.+ ++||||+||.+++. . .. +.. +..+ . .+
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 168 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY 168 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence 1 0 0 234456665 89999999986321 0 00 000 0000 0 01
Q ss_pred HHHHHHHHHHH----HhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESML----MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l----~~~gl~~tivRPg~l~ 237 (265)
...|..+|+++ +..|++++++||+.+.
T Consensus 169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~ 199 (338)
T 2rh8_A 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMA 199 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTCCEEEEEECEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceE
Confidence 12444555544 3369999999999864
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=133.37 Aligned_cols=136 Identities=13% Similarity=0.172 Sum_probs=100.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. ....+.++.+|++|++++.++++ ++|+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 84 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999999999999999999999999999997665432 22347889999999999988876 7999
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.+ . + +...+++.+.++||++||..++.+.++...|. ..|..
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a 159 (260)
T 1nff_A 85 LVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYT-----ATKFA 159 (260)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH-----HHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHH-----HHHHH
Confidence 998721 0 0 11224556778999999998876543322222 24444
Q ss_pred HHHH-------HHhCCCCEEEEeCCCcc
Q 024643 217 DESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+.+ +...|+++++||||++.
T Consensus 160 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 187 (260)
T 1nff_A 160 VRGLTKSTALELGPSGIRVNSIHPGLVK 187 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHhCccCcEEEEEEeCCCC
Confidence 4433 33479999999999864
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=133.47 Aligned_cols=136 Identities=13% Similarity=0.185 Sum_probs=102.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
.+++|+||||+|+||++++++|+++|++|++++|+.++..++ .+..++++.+|++|.+++.++++ ++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 468999999999999999999999999999999998776543 34678999999999999988776 78999
Q ss_pred EEcCc------------h-H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 168 ICPSE------------G-F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 168 i~~~~------------~-~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|++.+ . + +...+++.+.++||++||...+.+..+...|. ..|...
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK~a~ 158 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYS-----ATKAAL 158 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH-----HHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHH-----HHHHHH
Confidence 98721 0 0 11224566788999999988876544333332 244444
Q ss_pred HHH-------HHhCCCCEEEEeCCCccC
Q 024643 218 ESM-------LMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 218 E~~-------l~~~gl~~tivRPg~l~~ 238 (265)
|.+ +...|+++++|+||++..
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t 186 (281)
T 3m1a_A 159 EQLSEGLADEVAPFGIKVLIVEPGAFRT 186 (281)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHHHHHHHhhccCcEEEEEecCcccc
Confidence 443 333799999999998743
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.67 E-value=9.1e-16 Score=133.55 Aligned_cols=141 Identities=13% Similarity=0.188 Sum_probs=100.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+... +..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 35689999999999999999999999999999999876544321 2368899999999999988886
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
++|++|++.+ . + +...+++.+.++||++||..++.+.+....|..++.
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 164 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPV 164 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHH
Confidence 6999998721 0 0 112244567889999999988765443333322221
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|+++++|+||++.
T Consensus 165 ~~~~~~la~e~~~~gi~v~~v~Pg~v~ 191 (260)
T 2z1n_A 165 IGVVRTLALELAPHGVTVNAVLPSLIL 191 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECHHH
T ss_pred HHHHHHHHHHHhhhCeEEEEEEECCcc
Confidence 112222333345579999999999863
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.1e-15 Score=133.03 Aligned_cols=136 Identities=12% Similarity=0.118 Sum_probs=100.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-------CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++.. +..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999999999876544321 5578899999999999888775
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
++|++|++.+ . + +...+++.+.++||++||..++.+.+....|. .
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~ 159 (263)
T 3ai3_A 85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYN-----V 159 (263)
T ss_dssp SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH-----H
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHH-----H
Confidence 7999998721 0 0 11113456778999999998876543332222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 191 (263)
T 3ai3_A 160 TKAALMMFSKTLATEVIKDNIRVNCINPGLIL 191 (263)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 34333333 34479999999999863
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.67 E-value=2.4e-16 Score=138.23 Aligned_cols=123 Identities=19% Similarity=0.191 Sum_probs=97.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc----h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE----G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~----~ 173 (265)
|+|+||||||+||++++++|+++|++|++++|. .+|+.|.+.+.++++ ++|+||++.. .
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------~~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~ 70 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------LLDITNISQVQQVVQEIRPHIIIHCAAYTKVD 70 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------TSCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------ccCCCCHHHHHHHHHhcCCCEEEECCcccChH
Confidence 589999999999999999999999999999982 389999999999998 6999998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchh-HHHHHHHHHHHHHhCCCCEE
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLMASGIPYT 229 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~-~~~~k~~~E~~l~~~gl~~t 229 (265)
.+.+++++.++ ||||+||..+|...... .+..+.. +...|..+|++++....+++
T Consensus 71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 149 (287)
T 3sc6_A 71 QAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHNKYF 149 (287)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSEE
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcE
Confidence 14455677777 79999999988653211 1112222 33588999999999888999
Q ss_pred EEeCCCccC
Q 024643 230 IIRTGVLQN 238 (265)
Q Consensus 230 ivRPg~l~~ 238 (265)
++||+.+..
T Consensus 150 ilR~~~v~G 158 (287)
T 3sc6_A 150 IVRTSWLYG 158 (287)
T ss_dssp EEEECSEEC
T ss_pred EEeeeeecC
Confidence 999998643
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-15 Score=133.84 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=103.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+......+.++.+|++|.+++.++++ .+|++|+
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 456899999999999999999999999999999999887776666678999999999999887775 7899998
Q ss_pred cCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHHH
Q 024643 170 PSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQD 217 (265)
Q Consensus 170 ~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~ 217 (265)
+.+ . + +...+++.+.++||++||..++...+....|..++.. ...+..
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l 173 (266)
T 3p19_A 94 NAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENV 173 (266)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHH
Confidence 721 0 0 1112455677899999999887654433333222211 111222
Q ss_pred HHHHHhCCCCEEEEeCCCcc
Q 024643 218 ESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l~ 237 (265)
...+...|+++++|+||++.
T Consensus 174 a~e~~~~gi~vn~v~PG~v~ 193 (266)
T 3p19_A 174 REEVAASNVRVMTIAPSAVK 193 (266)
T ss_dssp HHHHGGGTCEEEEEEECSBS
T ss_pred HHHhcccCcEEEEEeeCccc
Confidence 23344579999999999874
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.3e-16 Score=139.00 Aligned_cols=130 Identities=11% Similarity=0.051 Sum_probs=96.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcC---c
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPS---E 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~---~ 172 (265)
++|+|+||||||+||++++++|+++|+ +... ....++.+.+|+.|++++.+++++ +|+|||+. .
T Consensus 5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~~~~ 73 (319)
T 4b8w_A 5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----DWVFVSSKDADLTDTAQTRALFEKVQPTHVIHLAAMVG 73 (319)
T ss_dssp CCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----EEEECCTTTCCTTSHHHHHHHHHHSCCSEEEECCCCCC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----cccccCceecccCCHHHHHHHHhhcCCCEEEECceecc
Confidence 578999999999999999999999998 2111 112355668999999999999987 99999871 1
Q ss_pred -h-------------------HHHHHHHhCCCCEEEEecccccccCCCCc--c-------cccch--hHHHHHHHHHHHH
Q 024643 173 -G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q-------ALMKG--NARKLAEQDESML 221 (265)
Q Consensus 173 -~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--~-------~~~~~--~~~~~k~~~E~~l 221 (265)
. .+.+++++.+++||||+||.++|...... . +..+. .+...|..+|+++
T Consensus 74 ~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~ 153 (319)
T 4b8w_A 74 GLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQN 153 (319)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHH
T ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHH
Confidence 0 14556788899999999999998653211 0 11111 1334788888877
Q ss_pred Hh----CCCCEEEEeCCCccC
Q 024643 222 MA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 222 ~~----~gl~~tivRPg~l~~ 238 (265)
+. .+++++++||+.+..
T Consensus 154 ~~~~~~~~~~~~ilRp~~v~G 174 (319)
T 4b8w_A 154 RAYFQQYGCTFTAVIPTNVFG 174 (319)
T ss_dssp HHHHHHHCCEEEEEEECEEEC
T ss_pred HHHHHhhCCCEEEEeeccccC
Confidence 54 799999999998643
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.67 E-value=3.3e-16 Score=145.53 Aligned_cols=142 Identities=16% Similarity=0.179 Sum_probs=102.2
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh------------------hhcCCccEEeeeCCCCHHH
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKF 156 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~------------------~~~~~~v~~i~~D~~d~~~ 156 (265)
....+|+|+||||||+||++++++|+++|++|++++|+..... .....+++++.+|+.|++.
T Consensus 65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 3445679999999999999999999999999999999986211 1123679999999999888
Q ss_pred HHHHHcCCCEEEEcCch-------------------HHHHHHHhCCCCEEEEecccccccCC-------------CCccc
Q 024643 157 LKTALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSVYRGS-------------GGIQA 204 (265)
Q Consensus 157 l~~~~~~~d~vi~~~~~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~-------------~~~~~ 204 (265)
+. .+.++|+||++... .+.+++.. ++++|||+||.++ +.. ....+
T Consensus 145 l~-~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~~ 221 (427)
T 4f6c_A 145 VV-LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISV-GTYFDIDTEDVTFSEADVYKG 221 (427)
T ss_dssp CC-CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSCSS
T ss_pred CC-CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHh-CCCccCCCCCccccccccccC
Confidence 87 78899999987210 13445556 7899999999988 211 00000
Q ss_pred ccchh-HHHHHHHHHHHHHh---CCCCEEEEeCCCccCC
Q 024643 205 LMKGN-ARKLAEQDESMLMA---SGIPYTIIRTGVLQNT 239 (265)
Q Consensus 205 ~~~~~-~~~~k~~~E~~l~~---~gl~~tivRPg~l~~~ 239 (265)
..+.. +...|..+|.++++ .|++++++|||++...
T Consensus 222 ~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~ 260 (427)
T 4f6c_A 222 QLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSP 260 (427)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESC
T ss_pred CCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecC
Confidence 11222 33588888888876 8999999999987543
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.2e-16 Score=137.83 Aligned_cols=133 Identities=17% Similarity=0.151 Sum_probs=100.9
Q ss_pred EEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc---h
Q 024643 101 AVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE---G 173 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~---~ 173 (265)
+|+||||+|+||++++++|+++ |++|++++|+..... +++++.+|+.|++++.++++ ++|+|||+.. .
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 75 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA 75 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----TCCEEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----CceEEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence 4899999999999999999999 899999999765432 57889999999999999998 8999998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCc------ccccchhHH-HHHHHHHHHHH----hC
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNAR-KLAEQDESMLM----AS 224 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~~~~-~~k~~~E~~l~----~~ 224 (265)
.+.+++++.++++||++||.++|...... .+..+...| ..|..+|.+++ +.
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~ 155 (317)
T 3ajr_A 76 KGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF 155 (317)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc
Confidence 13345677899999999999998653210 011122223 47777777664 36
Q ss_pred CCCEEEEeCCCccC
Q 024643 225 GIPYTIIRTGVLQN 238 (265)
Q Consensus 225 gl~~tivRPg~l~~ 238 (265)
+++++++||+.+..
T Consensus 156 ~~~~~~lR~~~~~g 169 (317)
T 3ajr_A 156 GLDVRSLRYPGIIS 169 (317)
T ss_dssp CCEEEEEEECEEEC
T ss_pred CCeEEEEecCcEec
Confidence 99999999876543
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=2.4e-15 Score=131.37 Aligned_cols=136 Identities=15% Similarity=0.154 Sum_probs=100.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++.. +..+.++.+|++|++++.++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 45789999999999999999999999999999999976544321 4578899999999999888775
Q ss_pred -CCCEEEEcC------chH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 -GVRSIICPS------EGF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 -~~d~vi~~~------~~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++. ..+ +...+++.+.++||++||...+...+....|.
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~---- 166 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYA---- 166 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHH----
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHH----
Confidence 689999872 110 11224556778999999988765443332222
Q ss_pred HHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 167 -asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 199 (267)
T 1iy8_A 167 -AAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIW 199 (267)
T ss_dssp -HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred -HHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCc
Confidence 23433333 334579999999999863
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.66 E-value=1.9e-15 Score=130.01 Aligned_cols=134 Identities=14% Similarity=0.215 Sum_probs=98.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999987654322 13468899999999999988876 78
Q ss_pred CEEEEcCc-----h---H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 165 RSIICPSE-----G---F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 165 d~vi~~~~-----~---~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
|++|++.+ . + +...+++.+.++||++||..++...++...|.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~----- 156 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYT----- 156 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH-----
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHH-----
Confidence 99998721 1 0 11123455788999999988765443322222
Q ss_pred HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...+.+. ...|++++++|||++.
T Consensus 157 ~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 189 (250)
T 2cfc_A 157 TSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIE 189 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence 2444444333 3469999999999874
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.3e-15 Score=135.46 Aligned_cols=126 Identities=11% Similarity=0.119 Sum_probs=97.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc--h-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE--G- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~--~- 173 (265)
+|+|+||||+|+||++++++|+++|++|+++.|+. .+|+.|.+++.++++ ++|+|||+.. .
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~ 68 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 68 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------cCCccCHHHHHHHHHhcCCCEEEEcCeecCC
Confidence 47899999999999999999999999999987753 379999999999998 9999998721 0
Q ss_pred --------------------HHHHHHHhCCCCEEEEecccccccCCCC--cc-------cccc--hhHHHHHHHHHHHHH
Q 024643 174 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--IQ-------ALMK--GNARKLAEQDESMLM 222 (265)
Q Consensus 174 --------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~~-------~~~~--~~~~~~k~~~E~~l~ 222 (265)
.+.+++++.++++|||+||.++|..... .. +..+ ..+...|..+|++++
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~ 148 (321)
T 1e6u_A 69 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 148 (321)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHH
Confidence 1334567788999999999999864311 10 1112 123357888888876
Q ss_pred h----CCCCEEEEeCCCccC
Q 024643 223 A----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 223 ~----~gl~~tivRPg~l~~ 238 (265)
. .+++++++||+++..
T Consensus 149 ~~~~~~~~~~~ilrp~~v~G 168 (321)
T 1e6u_A 149 SYNRQYGRDYRSVMPTNLYG 168 (321)
T ss_dssp HHHHHHCCEEEEEEECEEES
T ss_pred HHHHHhCCCEEEEEeCCcCC
Confidence 5 599999999998653
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=5.9e-16 Score=136.34 Aligned_cols=126 Identities=23% Similarity=0.204 Sum_probs=98.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCc--h--
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE--G-- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~--~-- 173 (265)
|+|+||||||+||++++++|+ +|++|++++|+.. .+.+|+.|++++.+++++ +|+|||+.. .
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~ 68 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------cccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence 589999999999999999999 8999999999762 357899999999999986 999998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchhHH-HHHHHHHHHHHhCCCCEE
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAEQDESMLMASGIPYT 229 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~~~E~~l~~~gl~~t 229 (265)
.+.+++++.++ ||||+||.++|..... . .+..+...| ..|..+|++++....+++
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~ 147 (299)
T 1n2s_A 69 KAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHL 147 (299)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEE
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCCCeE
Confidence 13445666777 8999999998865421 0 111122233 488999999988777999
Q ss_pred EEeCCCccC
Q 024643 230 IIRTGVLQN 238 (265)
Q Consensus 230 ivRPg~l~~ 238 (265)
++||+++..
T Consensus 148 ilRp~~v~G 156 (299)
T 1n2s_A 148 IFRTSWVYA 156 (299)
T ss_dssp EEEECSEEC
T ss_pred EEeeeeecC
Confidence 999998653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.66 E-value=1.6e-15 Score=138.06 Aligned_cols=137 Identities=10% Similarity=0.003 Sum_probs=101.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhh-------cCCccEEeeeCCCCHHHHHHHHcC--CC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--VR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~-------~~~~v~~i~~D~~d~~~l~~~~~~--~d 165 (265)
|+|+||||+|+||++++++|+++|++|++++|+... ...+ ...+++++.+|++|++++.+++++ +|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999999999999998643 2222 234688999999999999999986 69
Q ss_pred EEEEcCc----h------------------HHHHHHHhCCC---CEEEEecccccccCCCC--c---ccccchhHH-HHH
Q 024643 166 SIICPSE----G------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--I---QALMKGNAR-KLA 214 (265)
Q Consensus 166 ~vi~~~~----~------------------~~~~aa~~~gv---~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k 214 (265)
+||++.. . .+.+++...++ ++||++||.++|..... . .+..+...| ..|
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK 184 (375)
T 1t2a_A 105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAK 184 (375)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHH
Confidence 9998721 0 13345667777 89999999998864321 0 111122223 478
Q ss_pred HHHHHHHHh----CCCCEEEEeCCCc
Q 024643 215 EQDESMLMA----SGIPYTIIRTGVL 236 (265)
Q Consensus 215 ~~~E~~l~~----~gl~~tivRPg~l 236 (265)
..+|.+++. .+++++++||+.+
T Consensus 185 ~~~e~~~~~~~~~~~~~~~i~r~~~~ 210 (375)
T 1t2a_A 185 LYAYWIVVNFREAYNLFAVNGILFNH 210 (375)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecccc
Confidence 888887654 5899999999864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.65 E-value=4.2e-16 Score=138.18 Aligned_cols=131 Identities=18% Similarity=0.126 Sum_probs=95.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc----chhhh----cCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR----NAMES----FGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~----~~~~~----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
++|+|+||||||+||++++++|+++|++|++++|+.. ....+ ...+++++.+|+. ++|+||+
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~d~vi~ 75 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DVRLVYH 75 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TEEEEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cCCEEEE
Confidence 4789999999999999999999999999999999875 21111 1234566666655 8899998
Q ss_pred cCc---------------------hHHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHH
Q 024643 170 PSE---------------------GFISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLM 222 (265)
Q Consensus 170 ~~~---------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~ 222 (265)
+.. ..+.+++++.+++||||+||.++|...... .+..+...| ..|..+|++++
T Consensus 76 ~a~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 155 (321)
T 3vps_A 76 LASHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKVGLEMVAG 155 (321)
T ss_dssp CCCCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred CCccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence 721 014556778889999999999998654221 112222333 57888888876
Q ss_pred h----CCC-CEEEEeCCCccC
Q 024643 223 A----SGI-PYTIIRTGVLQN 238 (265)
Q Consensus 223 ~----~gl-~~tivRPg~l~~ 238 (265)
. .++ +++++||+++..
T Consensus 156 ~~~~~~~~~~~~ilRp~~v~G 176 (321)
T 3vps_A 156 AHQRASVAPEVGIVRFFNVYG 176 (321)
T ss_dssp HHHHSSSSCEEEEEEECEEEC
T ss_pred HHHHHcCCCceEEEEeccccC
Confidence 5 689 999999998654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.3e-15 Score=130.84 Aligned_cols=136 Identities=11% Similarity=0.134 Sum_probs=98.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4568999999999999999999999999999999987654332 24578899999999999988876
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
++|++|++.+ . + +...+++.+.++||++||..++.+.++...|. .
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~ 159 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYS-----T 159 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHH-----H
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHH-----H
Confidence 7999998721 0 0 01124456788999999986654433222222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...++++++++||++.
T Consensus 160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~ 191 (248)
T 2pnf_A 160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIE 191 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeceec
Confidence 34333333 33468999999999863
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.9e-15 Score=135.47 Aligned_cols=137 Identities=19% Similarity=0.148 Sum_probs=99.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc----hhh---hcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AME---SFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~----~~~---~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|+|+||||+||||++++++|+++|++|++++|.... ... ..+..++++.+|++|++++.++++ ++|+|||+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 589999999999999999999999999999875322 111 124568899999999999999887 49999987
Q ss_pred Cc----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c---cccc--chhHHHHHHHHHHHH
Q 024643 171 SE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALM--KGNARKLAEQDESML 221 (265)
Q Consensus 171 ~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~--~~~~~~~k~~~E~~l 221 (265)
.+ . .+.+++++.++++||++||.++|..... . .+.. ...+...|..+|+++
T Consensus 81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~ 160 (338)
T 1udb_A 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHH
Confidence 21 0 0233466778999999999988854211 0 0111 122335788888876
Q ss_pred Hh----C-CCCEEEEeCCCc
Q 024643 222 MA----S-GIPYTIIRTGVL 236 (265)
Q Consensus 222 ~~----~-gl~~tivRPg~l 236 (265)
+. . +++++++||+.+
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v 180 (338)
T 1udb_A 161 TDLQKAQPDWSIALLRYFNP 180 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEE
T ss_pred HHHHHhcCCCceEEEeecee
Confidence 54 3 799999998754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.1e-15 Score=131.01 Aligned_cols=136 Identities=12% Similarity=0.071 Sum_probs=100.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ ++|+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3568999999999999999999999999999999998665433 13467889999999999888776 7999
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.+ . + +...+++.+.++||++||..++.+.+....|. ..|..
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK~a 157 (254)
T 1hdc_A 83 LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYG-----ASKWG 157 (254)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH-----HHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHH-----HHHHH
Confidence 998721 0 0 11224556778999999988765543332222 23433
Q ss_pred HHH-------HHHhCCCCEEEEeCCCcc
Q 024643 217 DES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.+. .+...|+++++|+||++.
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 185 (254)
T 1hdc_A 158 VRGLSKLAAVELGTDRIRVNSVHPGMTY 185 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecccCc
Confidence 333 334579999999999863
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1e-15 Score=138.34 Aligned_cols=136 Identities=13% Similarity=0.145 Sum_probs=100.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-----CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC---CCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-----~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~---~d~vi~~ 170 (265)
+|+|+||||||+||++++++|+++| ++|++++|+..... ....+++++.+|+.|++++.+++++ +|+|||+
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~ 79 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV 79 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence 3789999999999999999999999 99999999876543 2345789999999999999999998 9999988
Q ss_pred Cc------h-----------HHHHHHHhC--CCCEEE-------EecccccccCCC----Ccc---cccc-hhHHHHHHH
Q 024643 171 SE------G-----------FISNAGSLK--GVQHVI-------LLSQLSVYRGSG----GIQ---ALMK-GNARKLAEQ 216 (265)
Q Consensus 171 ~~------~-----------~~~~aa~~~--gv~r~V-------~iSS~~v~~~~~----~~~---~~~~-~~~~~~k~~ 216 (265)
.. . .+.+++++. ++++|| |+||.++|.... +.. +..+ ...| ..
T Consensus 80 a~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y---~~ 156 (364)
T 2v6g_A 80 TWANRSTEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY---YD 156 (364)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH---HH
T ss_pred CCCCcchHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh---HH
Confidence 21 0 134456666 799998 799998875431 110 1111 1122 23
Q ss_pred HHHHHH----hCC-CCEEEEeCCCccC
Q 024643 217 DESMLM----ASG-IPYTIIRTGVLQN 238 (265)
Q Consensus 217 ~E~~l~----~~g-l~~tivRPg~l~~ 238 (265)
+|+++. ..+ ++++++||+++.+
T Consensus 157 ~E~~~~~~~~~~~~~~~~ilRp~~v~G 183 (364)
T 2v6g_A 157 LEDIMLEEVEKKEGLTWSVHRPGNIFG 183 (364)
T ss_dssp HHHHHHHHHTTSTTCEEEEEEESSEEC
T ss_pred HHHHHHHHhhcCCCceEEEECCCceeC
Confidence 455443 356 9999999998654
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-15 Score=129.74 Aligned_cols=136 Identities=13% Similarity=0.173 Sum_probs=99.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+..+.+|++|.+++.++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999987654332 24468889999999998887765 7
Q ss_pred CCEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|++|++.+ .+ +...+++.+.++||++||..++.+.++...|. .
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~ 166 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYN-----V 166 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHH-----H
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHH-----H
Confidence 999998721 00 11114456788999999998876543332222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 167 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 198 (260)
T 2zat_A 167 SKTALLGLTKNLAVELAPRNIRVNCLAPGLIK 198 (260)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEECccc
Confidence 44433333 34469999999999874
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.65 E-value=3.7e-15 Score=130.53 Aligned_cols=139 Identities=17% Similarity=0.167 Sum_probs=99.1
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
.....+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++
T Consensus 16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3455678999999999999999999999999999999987654322 24568889999999999887775
Q ss_pred ---CCCEEEEcCc-----h--------H-------------H----HHHHHhCCCCEEEEecccc-cccCCCCcccccch
Q 024643 163 ---GVRSIICPSE-----G--------F-------------I----SNAGSLKGVQHVILLSQLS-VYRGSGGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~-----~--------~-------------~----~~aa~~~gv~r~V~iSS~~-v~~~~~~~~~~~~~ 208 (265)
++|++|++.+ . + + ...+++.+.++||++||.. ..........|.
T Consensus 96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~-- 173 (267)
T 1vl8_A 96 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYA-- 173 (267)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHH--
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHH--
Confidence 7899998721 0 0 0 1123456778999999987 443322222222
Q ss_pred hHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 174 ---asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 206 (267)
T 1vl8_A 174 ---ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYR 206 (267)
T ss_dssp ---HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred ---HHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence 244444433 34479999999999874
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=3.8e-15 Score=128.82 Aligned_cols=140 Identities=12% Similarity=0.142 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ +
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 84 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG 84 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999997654432 14568899999999999887765 7
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--H
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 211 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~ 211 (265)
+|++|++.+ . + ....+++.+ ++||++||...+.+.+....|..++. .
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 163 (247)
T 2jah_A 85 LDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVN 163 (247)
T ss_dssp CSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHH
Confidence 899998611 0 0 111134455 89999999887654433323322221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~PG~v~ 189 (247)
T 2jah_A 164 AFSETLRQEVTERGVRVVVIEPGTTD 189 (247)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBS
T ss_pred HHHHHHHHHhcccCcEEEEEECCCCC
Confidence 11222333445679999999999874
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=2.7e-15 Score=129.34 Aligned_cols=136 Identities=10% Similarity=0.139 Sum_probs=100.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ +
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4568999999999999999999999999999999987654332 24568899999999999988876 8
Q ss_pred CCEEEEcCc-------h-----H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 164 VRSIICPSE-------G-----F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 164 ~d~vi~~~~-------~-----~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
+|++|++.+ . + +.. .+++.+.++||++||..++.+..+...|. ..|
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK 163 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA-----SSK 163 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHH-----HHH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccH-----HHH
Confidence 999998721 0 0 111 13456778999999998876544332222 244
Q ss_pred HHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 215 EQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
...|.+. ...+++++++|||++.
T Consensus 164 ~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~ 193 (255)
T 1fmc_A 164 AAASHLVRNMAFDLGEKNIRVNGIAPGAIL 193 (255)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecccCc
Confidence 4444433 3468999999999874
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.65 E-value=1.5e-15 Score=136.35 Aligned_cols=141 Identities=13% Similarity=0.057 Sum_probs=104.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-------CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-CCCEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-------TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-GVRSII 168 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-------~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-~~d~vi 168 (265)
..+|+|+||||+||||++++++|+++| ++|++++|+..........+++++.+|++|++++.++++ ++|+||
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi 91 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIF 91 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence 456899999999999999999999999 899999998754432234568899999999999999994 899999
Q ss_pred EcCc--h-------------------HHHHHHHhCC-----CCEEEEecccccccCCCC--c---ccccchh-HHHHHHH
Q 024643 169 CPSE--G-------------------FISNAGSLKG-----VQHVILLSQLSVYRGSGG--I---QALMKGN-ARKLAEQ 216 (265)
Q Consensus 169 ~~~~--~-------------------~~~~aa~~~g-----v~r~V~iSS~~v~~~~~~--~---~~~~~~~-~~~~k~~ 216 (265)
|+.. . .+.+++++.+ +++||++||.++|....+ . .+..+.. +...|..
T Consensus 92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 171 (342)
T 2hrz_A 92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAI 171 (342)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHH
T ss_pred ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHH
Confidence 8721 0 1233455554 899999999998865311 1 0111222 2347888
Q ss_pred HHHHHHh----CCCCEEEEeCCCcc
Q 024643 217 DESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~----~gl~~tivRPg~l~ 237 (265)
+|+++++ .+++++++|+..+.
T Consensus 172 ~e~~~~~~~~~~~~~~~~ir~~~v~ 196 (342)
T 2hrz_A 172 CELLLSDYSRRGFFDGIGIRLPTIC 196 (342)
T ss_dssp HHHHHHHHHHTTSCEEEEEEECEET
T ss_pred HHHHHHHHHHhcCCCceeEEeeeEE
Confidence 8887654 47899999988754
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.9e-15 Score=128.81 Aligned_cols=136 Identities=13% Similarity=0.124 Sum_probs=98.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh---cCCccEEeeeCCCCHHHHHHHH-------cCCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~---~~~~v~~i~~D~~d~~~l~~~~-------~~~d 165 (265)
..+++++||||+|+||++++++|+++|++|++++|+. ++.++. .+..+.++++|++|++++.+++ .++|
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 3568999999999999999999999999999999987 554321 2456889999999999988775 3789
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
++|++.+ . + +...+++.+.++||++||..++.+.+....|. ..|.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK~ 159 (249)
T 2ew8_A 85 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYI-----STKA 159 (249)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHH-----HHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHH-----HHHH
Confidence 9998721 0 0 11114556778999999998876543332332 2343
Q ss_pred HHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 216 QDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..+. .+...|+++++|+||++.
T Consensus 160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 188 (249)
T 2ew8_A 160 ANIGFTRALASDLGKDGITVNAIAPSLVR 188 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHhcCcEEEEEecCcCc
Confidence 3333 334479999999999864
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.8e-15 Score=129.57 Aligned_cols=137 Identities=17% Similarity=0.162 Sum_probs=93.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH--------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------- 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------- 161 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|.+++.+++
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 34578999999999999999999999999999999987654432 2446889999999999888776
Q ss_pred cCCCEEEEcCc-----h--------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 162 RGVRSIICPSE-----G--------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 162 ~~~d~vi~~~~-----~--------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
..+|++|++.+ . + +..+ +++.+.++||++||..++........|.
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~----- 165 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYS----- 165 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHH-----
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHH-----
Confidence 46899997621 0 0 1111 3456788999999988765433222222
Q ss_pred HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...+.+. ...|+++++||||++.
T Consensus 166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 198 (266)
T 1xq1_A 166 ATKGALNQLARNLACEWASDGIRANAVAPAVIA 198 (266)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC
T ss_pred HHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCc
Confidence 2444444333 3469999999999864
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=4.1e-15 Score=129.39 Aligned_cols=136 Identities=14% Similarity=0.118 Sum_probs=99.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH--------c
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~--------~ 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.+++ .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999987654432 1446888999999999988777 4
Q ss_pred CCCEEEEcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+ . + +.. .+++.+.++||++||..++.+.+....| ..
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y-----~~ 161 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVY-----GA 161 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHH-----HH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchH-----HH
Confidence 6899998721 0 0 111 1345677899999998876543322222 23
Q ss_pred HHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
.|...+.+. ...|+++++|+||++.
T Consensus 162 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 193 (260)
T 2ae2_A 162 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIA 193 (260)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEecCCCC
Confidence 454444443 3368999999999863
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.64 E-value=5.3e-15 Score=128.78 Aligned_cols=136 Identities=11% Similarity=0.065 Sum_probs=98.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. ....+.++.+|++|++++.++++ ++|+
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~ 89 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4568999999999999999999999999999999998665433 22367889999999999988876 7999
Q ss_pred EEEcCc-----h--------H-------------H----HHHHHhCC-CCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 167 IICPSE-----G--------F-------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 167 vi~~~~-----~--------~-------------~----~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++.+ . + + ...+.+.+ .++||++||..++.+.+....|. ..|.
T Consensus 90 lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~ 164 (263)
T 3ak4_A 90 LCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYS-----ASKF 164 (263)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH-----HHHH
T ss_pred EEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHH-----HHHH
Confidence 998721 0 0 1 11133445 68999999988765443322222 2444
Q ss_pred HHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 216 QDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..+.+ +...|+++++|+||++.
T Consensus 165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 193 (263)
T 3ak4_A 165 AVFGWTQALAREMAPKNIRVNCVCPGFVK 193 (263)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBT
T ss_pred HHHHHHHHHHHHHhHcCeEEEEEeccccc
Confidence 33333 34469999999999873
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.64 E-value=2.1e-15 Score=130.18 Aligned_cols=140 Identities=15% Similarity=0.224 Sum_probs=98.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+|+||++++++|+++|++|++++| +.++.++. .+..+.++.+|++|++++.++++ +
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999999 65544322 24568899999999999888775 7
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR-- 211 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~-- 211 (265)
+|++|++.+ . + +...+++.+.++||++||...+.+.+....|..++..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 162 (246)
T 2uvd_A 83 VDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVI 162 (246)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHH
Confidence 999998721 0 0 1112445677899999998776543332223222211
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 163 ~~~~~la~e~~~~gi~v~~v~Pg~v~ 188 (246)
T 2uvd_A 163 GLTKTSAKELASRNITVNAIAPGFIA 188 (246)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred HHHHHHHHHhhhcCeEEEEEEecccc
Confidence 11122223345579999999999874
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.4e-15 Score=129.08 Aligned_cols=134 Identities=9% Similarity=0.163 Sum_probs=98.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
+++|+||||+|+||++++++|+++|+ +|++++|+.++.+.+ .+..+.++.+|++|++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999 999999987654432 14568899999999999888775
Q ss_pred ----CCCEEEEcCc-------------hH-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 ----GVRSIICPSE-------------GF-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ----~~d~vi~~~~-------------~~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ .+ +. ..+++.+.++||++||..++.+..+...|.
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~-- 159 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC-- 159 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH--
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH--
Confidence 6999998721 00 11 113445778999999998876543332222
Q ss_pred hHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++||||++.
T Consensus 160 ---~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 192 (244)
T 2bd0_A 160 ---MSKFGQRGLVETMRLYARKCNVRITDVQPGAVY 192 (244)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred ---HHHHHHHHHHHHHHHHhhccCcEEEEEECCCcc
Confidence 244444433 34578999999999864
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.64 E-value=6.9e-16 Score=146.77 Aligned_cols=141 Identities=17% Similarity=0.196 Sum_probs=103.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch------------------hhhcCCccEEeeeCCCCHHHHH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA------------------MESFGTYVESMAGDASNKKFLK 158 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~------------------~~~~~~~v~~i~~D~~d~~~l~ 158 (265)
..+|+|+||||||+||++|+++|+++|++|++++|+..+. ......+++++.+|+.|++.+.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 3467999999999999999999999999999999988632 1123568999999999988777
Q ss_pred HHHcCCCEEEEcCch-------------------HHHHHHHhCCCCEEEEeccccc--ccCC----CCc---cc---c-c
Q 024643 159 TALRGVRSIICPSEG-------------------FISNAGSLKGVQHVILLSQLSV--YRGS----GGI---QA---L-M 206 (265)
Q Consensus 159 ~~~~~~d~vi~~~~~-------------------~~~~aa~~~gv~r~V~iSS~~v--~~~~----~~~---~~---~-~ 206 (265)
++.++|+||++... .+.+++.+ ++++|||+||.++ +... .+. .+ . .
T Consensus 228 -~~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~ 305 (508)
T 4f6l_B 228 -LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL 305 (508)
T ss_dssp -CSSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCC
T ss_pred -CccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCcccccccccccccC
Confidence 77899999987210 13444555 7799999999988 1110 000 00 1 1
Q ss_pred chhHHHHHHHHHHHHHh---CCCCEEEEeCCCccCC
Q 024643 207 KGNARKLAEQDESMLMA---SGIPYTIIRTGVLQNT 239 (265)
Q Consensus 207 ~~~~~~~k~~~E~~l~~---~gl~~tivRPg~l~~~ 239 (265)
...+...|..+|+++++ .|++++++|||.+...
T Consensus 306 ~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~ 341 (508)
T 4f6l_B 306 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSP 341 (508)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESC
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccC
Confidence 12233588888888866 7999999999986543
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.9e-15 Score=136.75 Aligned_cols=139 Identities=15% Similarity=0.050 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-----CCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-----~~d~vi~~ 170 (265)
..+|+|+||||+|+||++++++|+++| ++|++++|+........-..+. +.+|+.|.+.+.++++ ++|+||++
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence 345789999999999999999999999 9999999987542111112334 7899999999999987 59999987
Q ss_pred Cc-------h-------------HHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchh-HHHHHHHHHHHHHh-
Q 024643 171 SE-------G-------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGN-ARKLAEQDESMLMA- 223 (265)
Q Consensus 171 ~~-------~-------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~-~~~~k~~~E~~l~~- 223 (265)
.. . .+.+++...++ +||++||.++|..... . .+..+.. +...|..+|++++.
T Consensus 123 A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~ 201 (357)
T 2x6t_A 123 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQI 201 (357)
T ss_dssp CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHH
T ss_pred CcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHH
Confidence 21 0 13445667788 9999999998865421 0 1111122 23578888888754
Q ss_pred ---CCCCEEEEeCCCcc
Q 024643 224 ---SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ---~gl~~tivRPg~l~ 237 (265)
.+++++++||+++.
T Consensus 202 ~~~~g~~~~ilRp~~v~ 218 (357)
T 2x6t_A 202 LPEANSQIVGFRYFNVY 218 (357)
T ss_dssp GGGCSSCEEEEEECEEE
T ss_pred HHHcCCCEEEEecCeEE
Confidence 58999999999865
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.64 E-value=2.9e-15 Score=147.64 Aligned_cols=141 Identities=18% Similarity=0.128 Sum_probs=105.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-------hhhcCCccEEeeeCCCCHHHHHHHHc--CCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-------MESFGTYVESMAGDASNKKFLKTALR--GVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-------~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~v 167 (265)
..+|+|+||||+|+||++++++|+++|++|++++|+.... ..+...+++++.+|+.|++++.++++ ++|+|
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V 88 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV 88 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence 3568999999999999999999999999999999976432 11224678899999999999999998 89999
Q ss_pred EEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCC------Cc---ccccch-hHHHHHH
Q 024643 168 ICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSG------GI---QALMKG-NARKLAE 215 (265)
Q Consensus 168 i~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~------~~---~~~~~~-~~~~~k~ 215 (265)
|++.. . .+.+++++.++++||++||.++|.... +. .+..+. .+...|.
T Consensus 89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~ 168 (699)
T 1z45_A 89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 168 (699)
T ss_dssp EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHH
T ss_pred EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHH
Confidence 98721 0 133446677899999999999875421 00 011122 2335888
Q ss_pred HHHHHHHh------CCCCEEEEeCCCcc
Q 024643 216 QDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.+|++++. .+++++++||+.+.
T Consensus 169 ~~E~~~~~~~~~~~~g~~~~ilR~~~vy 196 (699)
T 1z45_A 169 AIENILNDLYNSDKKSWKFAILRYFNPI 196 (699)
T ss_dssp HHHHHHHHHHHHSTTSCEEEEEEECEEE
T ss_pred HHHHHHHHHHHhccCCCcEEEEEecccc
Confidence 88888754 68999999998754
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=128.52 Aligned_cols=136 Identities=11% Similarity=0.153 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+... ...++++.+|++|++++.++++ .+
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999999876544321 1468899999999999888775 48
Q ss_pred CEEEEcCc-----h--------H-----------------HHHHHHhCCC-CEEEEecccccccCCCCcccccchhHHHH
Q 024643 165 RSIICPSE-----G--------F-----------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 d~vi~~~~-----~--------~-----------------~~~aa~~~gv-~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
|++|++.+ . + +...+++.+. ++||++||..++.+.+....|.. .
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~-----s 158 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNA-----S 158 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHH-----H
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchH-----H
Confidence 99998721 0 0 1122455666 79999999987755433323322 3
Q ss_pred HHHHHHHH-------H--hCCCCEEEEeCCCcc
Q 024643 214 AEQDESML-------M--ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l-------~--~~gl~~tivRPg~l~ 237 (265)
|...+.+. . ..++++++||||++.
T Consensus 159 K~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~ 191 (251)
T 1zk4_A 159 KGAVRIMSKSAALDCALKDYDVRVNTVHPGYIK 191 (251)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCc
Confidence 43333322 2 578999999999863
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5e-15 Score=129.32 Aligned_cols=137 Identities=7% Similarity=0.108 Sum_probs=99.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cC--CccEEeeeCCCCHHHHHHHHc-------C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FG--TYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~--~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.... .. ..+.++.+|++|++++.++++ +
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 34578999999999999999999999999999999987554322 11 268899999999999988876 7
Q ss_pred CCEEEEcCc--------------h-H-------------HH----HHHHhCCCCEEEEecccccccCCC-CcccccchhH
Q 024643 164 VRSIICPSE--------------G-F-------------IS----NAGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNA 210 (265)
Q Consensus 164 ~d~vi~~~~--------------~-~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~-~~~~~~~~~~ 210 (265)
+|++|++.+ . + +. ..+++.+.++||++||..++.... ....|.
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~---- 168 (278)
T 2bgk_A 93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYT---- 168 (278)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHH----
T ss_pred CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchH----
Confidence 899998721 0 0 11 113345778999999998876543 222222
Q ss_pred HHHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...|.+. ...|+++++||||++.
T Consensus 169 -~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 201 (278)
T 2bgk_A 169 -ATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVA 201 (278)
T ss_dssp -HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCS
T ss_pred -HHHHHHHHHHHHHHHHHhhcCcEEEEEEeceec
Confidence 2444444433 3469999999999874
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=5.7e-15 Score=127.32 Aligned_cols=138 Identities=12% Similarity=0.152 Sum_probs=98.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCcc-EEeeeCCCCHHHHHHHH------cCCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYV-ESMAGDASNKKFLKTAL------RGVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v-~~i~~D~~d~~~l~~~~------~~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+ .++.+|++|.+++.+++ .++|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 4568999999999999999999999999999999997654432 13345 88999999999988776 47899
Q ss_pred EEEcCc------------h-H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE------------G-F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~------------~-~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.+ . + +...+++.+.++||++||..++...+.. + ...+...|..
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~-~--~~~Y~~sK~a 165 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQ-F--ASSYMASKGA 165 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-C--BHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCC-c--chHHHHHHHH
Confidence 998721 0 0 1112445678899999998876543222 0 0112234544
Q ss_pred HHHHH-------HhCCCCEEEEeCCCcc
Q 024643 217 DESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
.|.+. ...|+++++||||++.
T Consensus 166 ~~~~~~~~~~~~~~~gi~v~~v~Pg~v~ 193 (254)
T 2wsb_A 166 VHQLTRALAAEWAGRGVRVNALAPGYVA 193 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEecccC
Confidence 44443 3369999999999863
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=4.8e-15 Score=127.04 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=99.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc---CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~ 171 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.++.. ..+++++.+|++|++++.++++ .+|++|++.
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECC
Confidence 45689999999999999999999999999999999876654332 2357888999999999999886 479999872
Q ss_pred c-----h--------H-------------HHHH----HHhCC-CCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 172 E-----G--------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 172 ~-----~--------~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
+ . + +..+ +.+.+ .++||++||..++.+.+....|. ..|...|.+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK~a~~~~ 159 (244)
T 1cyd_A 85 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYS-----STKGAMTML 159 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHH-----HHHHHHHHH
T ss_pred cccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhH-----HHHHHHHHH
Confidence 1 0 0 1111 33345 68999999998876543332222 244444444
Q ss_pred H-------HhCCCCEEEEeCCCcc
Q 024643 221 L-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l-------~~~gl~~tivRPg~l~ 237 (265)
. ...+++++++|||++.
T Consensus 160 ~~~~a~~~~~~gi~v~~v~pg~v~ 183 (244)
T 1cyd_A 160 TKAMAMELGPHKIRVNSVNPTVVL 183 (244)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBT
T ss_pred HHHHHHHhhhcCeEEEEEecCccc
Confidence 3 2368999999999863
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=2.4e-15 Score=134.62 Aligned_cols=137 Identities=8% Similarity=-0.095 Sum_probs=101.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh-----hh-cCCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM-----ES-FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~-----~~-~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
+|+|+||||+||||++++++|+++|++|++++|+..+.. .. ...+++++.+|++|++++.+++++ +|+|||+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 589999999999999999999999999999999875432 11 123688999999999999999986 5999987
Q ss_pred Cch----------------------HHHHHHHhCCC-CEEEEecccccccCCCC-----cccccchhHH-HHHHHHHHHH
Q 024643 171 SEG----------------------FISNAGSLKGV-QHVILLSQLSVYRGSGG-----IQALMKGNAR-KLAEQDESML 221 (265)
Q Consensus 171 ~~~----------------------~~~~aa~~~gv-~r~V~iSS~~v~~~~~~-----~~~~~~~~~~-~~k~~~E~~l 221 (265)
.+. .+.+++.+.++ ++||++||.++|+.... ..+..+...| ..|..+|.++
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~ 162 (345)
T 2z1m_A 83 AAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWIT 162 (345)
T ss_dssp CCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred CCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHH
Confidence 210 13344566677 89999999988854321 0111122223 5788888876
Q ss_pred Hh----CCCCEEEEeCCC
Q 024643 222 MA----SGIPYTIIRTGV 235 (265)
Q Consensus 222 ~~----~gl~~tivRPg~ 235 (265)
+. .+++++++|+..
T Consensus 163 ~~~~~~~~~~~~~~r~~~ 180 (345)
T 2z1m_A 163 VNYREAYNMFACSGILFN 180 (345)
T ss_dssp HHHHHHHCCCEEEEEECC
T ss_pred HHHHHHhCCceEeeeeee
Confidence 54 489999988765
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=4.8e-15 Score=128.65 Aligned_cols=134 Identities=16% Similarity=0.149 Sum_probs=97.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 47899999999999999999999999999999987654432 14568899999999999988776 799
Q ss_pred EEEEcCc-----hH-------------------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 166 SIICPSE-----GF-------------------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 166 ~vi~~~~-----~~-------------------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
++|++.+ .+ +...+++.+ .++||++||...+.+.+....|. ..|
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK 156 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYS-----SSK 156 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHH-----HHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHH-----HHH
Confidence 9998721 00 111234445 67999999987765443322222 234
Q ss_pred HHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 215 EQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
...+. .+...|+++++|+||++.
T Consensus 157 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 186 (256)
T 1geg_A 157 FAVRGLTQTAARDLAPLGITVNGYCPGIVK 186 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEECCCc
Confidence 33333 334579999999999873
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.63 E-value=3.6e-15 Score=129.78 Aligned_cols=135 Identities=14% Similarity=0.087 Sum_probs=98.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhhc-------CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMESF-------GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~-------~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++ .+... +..+.++.+|++|++++.++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46899999999999999999999999999999998765 43321 4568899999999999887775
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
++|++|++.+ . + +...+++.+.++||++||..++.+..+...|. .
T Consensus 83 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~ 157 (260)
T 1x1t_A 83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYV-----A 157 (260)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH-----H
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHH-----H
Confidence 6899998721 0 0 11113455678999999998765443322222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 189 (260)
T 1x1t_A 158 AKHGVVGFTKVTALETAGQGITANAICPGWVR 189 (260)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhccCCEEEEEEeecCcc
Confidence 44443333 33468999999999874
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.63 E-value=8.7e-15 Score=126.58 Aligned_cols=138 Identities=15% Similarity=0.134 Sum_probs=98.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..++++.+|++|++++.++++ +
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999987654322 24568999999999999888775 6
Q ss_pred CCEEEEcCc-----h---------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSE-----G---------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~-----~---------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|++|++.+ . + +..+ +++.+.++||++||..++...+.. +. ..+..
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~-~~--~~Y~~ 167 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQ-QQ--AAYNA 167 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSS-CC--HHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCC-Cc--cccHH
Confidence 899998721 0 0 0111 334567899999998776543221 00 11223
Q ss_pred HHHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
.|...|.+.+ ..|+++++||||++.
T Consensus 168 sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~ 199 (260)
T 3awd_A 168 SKAGVHQYIRSLAAEWAPHGIRANAVAPTYIE 199 (260)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEEeeeec
Confidence 5555554432 379999999999873
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.9e-15 Score=133.42 Aligned_cols=134 Identities=16% Similarity=0.112 Sum_probs=99.6
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcch--hhhcCCccEEeeeCCCCHHHHHHHHcC-----CCEEEEcCc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGDASNKKFLKTALRG-----VRSIICPSE 172 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~--~~~~~~~v~~i~~D~~d~~~l~~~~~~-----~d~vi~~~~ 172 (265)
+|+||||||+||++++++|+++| ++|++++|+.... ..+. .++ +.+|+.|.+.+.+++++ +|+||++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~ 77 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccCCCcEEEECcc
Confidence 48999999999999999999999 9999999987542 2222 233 78999999999999975 999998721
Q ss_pred --------------------hHHHHHHHhCCCCEEEEecccccccCCCC--c---ccccchh-HHHHHHHHHHHHHh---
Q 024643 173 --------------------GFISNAGSLKGVQHVILLSQLSVYRGSGG--I---QALMKGN-ARKLAEQDESMLMA--- 223 (265)
Q Consensus 173 --------------------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~---~~~~~~~-~~~~k~~~E~~l~~--- 223 (265)
..+.+++++.++ +||++||.++|..... . .+..+.. +...|..+|++++.
T Consensus 78 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~ 156 (310)
T 1eq2_A 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILP 156 (310)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred cccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHH
Confidence 014455677788 9999999998865321 0 1111222 33578888888754
Q ss_pred -CCCCEEEEeCCCccC
Q 024643 224 -SGIPYTIIRTGVLQN 238 (265)
Q Consensus 224 -~gl~~tivRPg~l~~ 238 (265)
.+++++++||+++..
T Consensus 157 ~~g~~~~~lrp~~v~G 172 (310)
T 1eq2_A 157 EANSQIVGFRYFNVYG 172 (310)
T ss_dssp GCSSCEEEEEECEEES
T ss_pred HcCCCEEEEeCCcEEC
Confidence 589999999998653
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.63 E-value=3.9e-15 Score=146.00 Aligned_cols=141 Identities=13% Similarity=0.064 Sum_probs=105.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHH-HHHHHcCCCEEEEcCc-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES-FGTYVESMAGDASNKKF-LKTALRGVRSIICPSE- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~-l~~~~~~~d~vi~~~~- 172 (265)
..+|+|+||||+|+||++++++|+++ |++|++++|+..+...+ ...+++++.+|++|.++ +.++++++|+|||+..
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~ 392 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 392 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence 35689999999999999999999998 89999999988665443 23578999999999765 7788899999998611
Q ss_pred ---h------------------HHHHHHHhCCCCEEEEecccccccCCCCc--c---------cc-cchhHH-HHHHHHH
Q 024643 173 ---G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI--Q---------AL-MKGNAR-KLAEQDE 218 (265)
Q Consensus 173 ---~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~--~---------~~-~~~~~~-~~k~~~E 218 (265)
. .+.+++.+.+ +||||+||.++|...... . +. .+...| ..|..+|
T Consensus 393 ~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E 471 (660)
T 1z7e_A 393 ATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLD 471 (660)
T ss_dssp CCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHH
T ss_pred cCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHH
Confidence 0 1334466677 999999999988543211 0 00 111233 4788888
Q ss_pred HHHH----hCCCCEEEEeCCCccC
Q 024643 219 SMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 219 ~~l~----~~gl~~tivRPg~l~~ 238 (265)
++++ +.+++++++|||++..
T Consensus 472 ~~~~~~~~~~gi~~~ilRpg~v~G 495 (660)
T 1z7e_A 472 RVIWAYGEKEGLQFTLFRPFNWMG 495 (660)
T ss_dssp HHHHHHHHHHCCCEEEEEECSEES
T ss_pred HHHHHHHHHcCCCEEEECCCcccC
Confidence 8874 3689999999998643
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=7.4e-15 Score=128.75 Aligned_cols=135 Identities=12% Similarity=0.157 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999999999997654332 12357889999999999988876
Q ss_pred --CCCEEEEcCc--------------hH----------------H----HHHHHhCCCCEEEEeccccc-ccCCCCcccc
Q 024643 163 --GVRSIICPSE--------------GF----------------I----SNAGSLKGVQHVILLSQLSV-YRGSGGIQAL 205 (265)
Q Consensus 163 --~~d~vi~~~~--------------~~----------------~----~~aa~~~gv~r~V~iSS~~v-~~~~~~~~~~ 205 (265)
++|++|++.+ .. + ...+++.+ ++||++||..+ +.+.+....|
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y 162 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY 162 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHH
Confidence 8999998721 00 0 01133345 89999999877 5443322222
Q ss_pred cchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 206 MKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
. ..|...+.+ +...|+++++|+||++.
T Consensus 163 ~-----~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 196 (278)
T 1spx_A 163 S-----IAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA 196 (278)
T ss_dssp H-----HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred H-----HHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 2 244444433 34479999999999874
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=5.1e-15 Score=127.89 Aligned_cols=139 Identities=17% Similarity=0.157 Sum_probs=97.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.++.. ..++.++.+|++|++++.++++ .+|++|+
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999999999999999987655432 1137889999999999887765 4899998
Q ss_pred cCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHH
Q 024643 170 PSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 217 (265)
Q Consensus 170 ~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~ 217 (265)
+.+ . + +...+++.+.++||++||.. ....+....|..++. ....+..
T Consensus 84 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~l 162 (245)
T 1uls_A 84 YAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTL 162 (245)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHH
Confidence 721 0 0 01113445778999999988 433332222222221 1112223
Q ss_pred HHHHHhCCCCEEEEeCCCcc
Q 024643 218 ESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l~ 237 (265)
...+...|+++++|+||++.
T Consensus 163 a~e~~~~gi~v~~v~PG~v~ 182 (245)
T 1uls_A 163 ALELGRWGIRVNTLAPGFIE 182 (245)
T ss_dssp HHHHGGGTEEEEEEEECSBC
T ss_pred HHHHhHhCeEEEEEEeCcCc
Confidence 33445579999999999874
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.62 E-value=5.1e-15 Score=128.41 Aligned_cols=135 Identities=16% Similarity=0.127 Sum_probs=98.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhhh--cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES--FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
.+++++||||+|+||++++++|+++|++|++++|+.+. .+++ .+..+.++.+|++|++++.++++ ++|+
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI 82 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999998752 1112 13468889999999999988886 8999
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.+ . + +...+++.+.++||++||..++...+....|. ..|..
T Consensus 83 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a 157 (255)
T 2q2v_A 83 LVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYV-----AAKHG 157 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHH-----HHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHH-----HHHHH
Confidence 998721 0 0 11224567788999999998765543322222 24444
Q ss_pred HHHH-------HHhCCCCEEEEeCCCcc
Q 024643 217 DESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+.+ +...|+++++|+||++.
T Consensus 158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 185 (255)
T 2q2v_A 158 VVGLTKVVGLETATSNVTCNAICPGWVL 185 (255)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEEESSBC
T ss_pred HHHHHHHHHHHhcccCcEEEEEeeCCCc
Confidence 4333 23468999999999863
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.62 E-value=3.3e-15 Score=129.55 Aligned_cols=136 Identities=19% Similarity=0.192 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc------C-------CccEEeeeCCCCHHHHHHHHcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-------TYVESMAGDASNKKFLKTALRG 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~------~-------~~v~~i~~D~~d~~~l~~~~~~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+... + ..+.++.+|++|.+++.++++.
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 35689999999999999999999999999999999876544321 1 4688999999999998887765
Q ss_pred -------C-CEEEEcCc-----h--------H-------------HHH----HHHhCC-CCEEEEecccccccCCCCccc
Q 024643 164 -------V-RSIICPSE-----G--------F-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQA 204 (265)
Q Consensus 164 -------~-d~vi~~~~-----~--------~-------------~~~----aa~~~g-v~r~V~iSS~~v~~~~~~~~~ 204 (265)
+ |++|++.+ . + +.. .+.+.+ .++||++||...+.+.++...
T Consensus 85 ~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 164 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTN 164 (264)
T ss_dssp HHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHH
T ss_pred HHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChh
Confidence 3 99998721 0 0 111 133344 579999999876554433222
Q ss_pred ccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 205 LMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|. ..|...+.+ +...|+++++||||++.
T Consensus 165 Y~-----~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 199 (264)
T 2pd6_A 165 YA-----ASKAGVIGLTQTAARELGRHGIRCNSVLPGFIA 199 (264)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred hH-----HHHHHHHHHHHHHHHHhhhcCeEEEEEeeeccc
Confidence 22 244433333 33479999999999864
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=1e-14 Score=128.00 Aligned_cols=136 Identities=19% Similarity=0.122 Sum_probs=97.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.+. ...+.++.+|++|++++.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999999999999876544321 2357889999999999887775
Q ss_pred -CCCEEEEcCc-----h-------------------------HHHHHHHhCCC--CEEEEecccccccC--CCCcccccc
Q 024643 163 -GVRSIICPSE-----G-------------------------FISNAGSLKGV--QHVILLSQLSVYRG--SGGIQALMK 207 (265)
Q Consensus 163 -~~d~vi~~~~-----~-------------------------~~~~aa~~~gv--~r~V~iSS~~v~~~--~~~~~~~~~ 207 (265)
++|++|++.+ . .+...+++.++ ++||++||..++.. ..+...|.
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~- 188 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS- 188 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH-
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhH-
Confidence 7999998721 0 01223556665 79999999987632 21111222
Q ss_pred hhHHHHHHHHHH-------HHH--hCCCCEEEEeCCCcc
Q 024643 208 GNARKLAEQDES-------MLM--ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~~~k~~~E~-------~l~--~~gl~~tivRPg~l~ 237 (265)
..|...+. .+. ..++++++|+||++.
T Consensus 189 ----~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~ 223 (279)
T 1xg5_A 189 ----ATKYAVTALTEGLRQELREAQTHIRATCISPGVVE 223 (279)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred ----HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCccc
Confidence 23333332 233 578999999999874
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=7.6e-15 Score=128.78 Aligned_cols=136 Identities=15% Similarity=0.169 Sum_probs=99.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH--------c
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL--------R 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~--------~ 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.+++ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999997654432 2456889999999999988776 4
Q ss_pred CCCEEEEcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+ . + +.. .+++.+.++||++||..++...+....|. .
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-----a 173 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYS-----A 173 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHH-----H
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhH-----H
Confidence 6899998721 0 0 111 13455678999999998876544332222 2
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 205 (273)
T 1ae1_A 174 SKGAINQMTKSLACEWAKDNIRVNSVAPGVIL 205 (273)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence 3433333 334569999999999874
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=8.2e-15 Score=126.96 Aligned_cols=136 Identities=12% Similarity=0.112 Sum_probs=97.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++|+||||+|+||++++++|+++|++|++++| +.++.+.. .+..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999999999 65443322 24568889999999999888776
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
++|++|++.+ . + +...+.+.+ .++||++||...+.+..+...|.
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~----- 159 (261)
T 1gee_A 85 KLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA----- 159 (261)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH-----
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHH-----
Confidence 7899998711 0 0 111134445 68999999987765443322222
Q ss_pred HHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...++++++||||++.
T Consensus 160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 192 (261)
T 1gee_A 160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcC
Confidence 244333332 33469999999999873
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=8e-15 Score=126.40 Aligned_cols=139 Identities=13% Similarity=0.141 Sum_probs=101.6
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc---CCCEE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSI 167 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~---~~d~v 167 (265)
.....+++|+||||+|+||++++++|+++|++|++++|+.++.+.. ....+.++.+|++|.+++.++++ ++|++
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~l 88 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDIL 88 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEE
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence 4456688999999999999999999999999999999998765443 34578899999999999998886 68999
Q ss_pred EEcCch-------------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 168 ICPSEG-------------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 168 i~~~~~-------------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|++.+. + + ...+.+.+.++||++||..++...+....|.. .|...
T Consensus 89 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-----sK~a~ 163 (249)
T 3f9i_A 89 VCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCA-----SKAGL 163 (249)
T ss_dssp EECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHH-----HHHHH
T ss_pred EECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHH-----HHHHH
Confidence 987210 0 0 11134466789999999988765543333322 34333
Q ss_pred HH-------HHHhCCCCEEEEeCCCcc
Q 024643 218 ES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~-------~l~~~gl~~tivRPg~l~ 237 (265)
+. .+...|+++++|+||++.
T Consensus 164 ~~~~~~la~e~~~~gi~v~~v~PG~v~ 190 (249)
T 3f9i_A 164 IGMTKSLSYEVATRGITVNAVAPGFIK 190 (249)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCccc
Confidence 33 234478999999999874
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.62 E-value=8.7e-15 Score=127.34 Aligned_cols=136 Identities=15% Similarity=0.193 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++ ++|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 85 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI 85 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999999999999999999999999999999998765433 34578899999999999988776 7999
Q ss_pred EEEcCc-----h--------H-------------HHH----HHHhCC-CCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 167 IICPSE-----G--------F-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 167 vi~~~~-----~--------~-------------~~~----aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++.+ . + +.. .+.+.+ ..+||++||...+.+.+....|. ..|.
T Consensus 86 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK~ 160 (259)
T 4e6p_A 86 LVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYC-----ATKA 160 (259)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHH-----HHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHH-----HHHH
Confidence 998721 0 0 111 122333 56999999998876544333332 2444
Q ss_pred HHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 216 QDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..+.+ +...|+++++|+||++.
T Consensus 161 a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 189 (259)
T 4e6p_A 161 AVISLTQSAGLDLIKHRINVNAIAPGVVD 189 (259)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHhhhcCCEEEEEEECCCc
Confidence 44433 34469999999999874
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.9e-15 Score=129.99 Aligned_cols=134 Identities=13% Similarity=0.109 Sum_probs=97.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++ .+|+
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999999999999999999999999999999987655433 24578899999999999887765 4699
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.+ . + +...+++.+ ++||++||..++.+.+....|. ..|..
T Consensus 84 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~-----~sK~a 157 (253)
T 1hxh_A 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYS-----ASKAA 157 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHH-----HHHHH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHH-----HHHHH
Confidence 998721 0 0 111244566 8999999998876543332222 24444
Q ss_pred HHHHH-------HhC--CCCEEEEeCCCc
Q 024643 217 DESML-------MAS--GIPYTIIRTGVL 236 (265)
Q Consensus 217 ~E~~l-------~~~--gl~~tivRPg~l 236 (265)
.+.+. ... |+++++||||++
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v 186 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGI 186 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEE
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCc
Confidence 43332 334 899999999986
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.62 E-value=9.4e-15 Score=126.95 Aligned_cols=134 Identities=16% Similarity=0.162 Sum_probs=97.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
+++++||||+|+||++++++|+++|++|++++|+.++ .++. .+..+.++.+|++|++++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999998765 3322 14568899999999999887775 7
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCC-CEEEEecccccccCCCCcccccchhHHH
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv-~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
+|++|++.+ . + +...+++.+. ++||++||...+.+.+....|. .
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~ 156 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYS-----T 156 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHH-----H
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHH-----H
Confidence 899998721 0 0 1111344566 8999999988765443322222 2
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 157 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 188 (258)
T 3a28_C 157 TKFAVRGLTQAAAQELAPKGHTVNAYAPGIVG 188 (258)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEECCccC
Confidence 3433333 334579999999999873
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.62 E-value=8.5e-15 Score=127.81 Aligned_cols=137 Identities=16% Similarity=0.174 Sum_probs=99.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cC-CccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~-~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+ ..+.++++|++|++++.++++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 45678999999999999999999999999999999998665432 12 468899999999999887775
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccc-cCCCCcccccchhH
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNA 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~-~~~~~~~~~~~~~~ 210 (265)
++|++|++.+ . + ....+++.+..+||++||.... ...+....|.
T Consensus 87 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~---- 162 (262)
T 3pk0_A 87 GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYG---- 162 (262)
T ss_dssp SCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHH----
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhH----
Confidence 7999998721 0 0 1112445577899999998764 3322222222
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 163 -asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 195 (262)
T 3pk0_A 163 -ATKAAQLGFMRTAAIELAPHKITVNAIMPGNIM 195 (262)
T ss_dssp -HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred -HHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCc
Confidence 244444333 34479999999999873
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.62 E-value=1.6e-14 Score=125.09 Aligned_cols=132 Identities=11% Similarity=0.128 Sum_probs=96.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+++++||||+|+||++++++|+++|++|++++|+.+... .++.++.+|++|++++.++++ ++|++|+
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ----YPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC----CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc----CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35689999999999999999999999999999999875321 237889999999999988875 7899998
Q ss_pred cCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 170 PSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 170 ~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
+.+ . + +.. .+++.+.++||++||..++.+.+....|. ..|...+.
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a~~~ 155 (250)
T 2fwm_X 81 AAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYG-----ASKAALKS 155 (250)
T ss_dssp CCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH-----HHHHHHHH
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHH-----HHHHHHHH
Confidence 721 0 0 111 13456778999999998875543322222 24444433
Q ss_pred H-------HHhCCCCEEEEeCCCcc
Q 024643 220 M-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~-------l~~~gl~~tivRPg~l~ 237 (265)
+ +...|+++++|+||++.
T Consensus 156 ~~~~la~e~~~~gi~v~~v~Pg~v~ 180 (250)
T 2fwm_X 156 LALSVGLELAGSGVRCNVVSPGSTD 180 (250)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred HHHHHHHHhCccCCEEEEEECCccc
Confidence 3 34479999999999864
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=7.1e-15 Score=126.85 Aligned_cols=136 Identities=11% Similarity=0.095 Sum_probs=98.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHH---cCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTAL---RGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~---~~~d~vi~~~~ 172 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+++. ..++.++.+|++|++++.+++ .++|++|++.+
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 35689999999999999999999999999999999986655433 126788999999999988765 47899998721
Q ss_pred ------------h-H-------------HHH----HHHhCCCCEEEEecccccccCCC-CcccccchhHHHHHHHHHHHH
Q 024643 173 ------------G-F-------------ISN----AGSLKGVQHVILLSQLSVYRGSG-GIQALMKGNARKLAEQDESML 221 (265)
Q Consensus 173 ------------~-~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~-~~~~~~~~~~~~~k~~~E~~l 221 (265)
. + +.. .+++.+.++||++||...+...+ +...| ...|...+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y-----~~sK~a~~~~~ 158 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVY-----STTKAAVIGLT 158 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHH-----HHHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccH-----HHHHHHHHHHH
Confidence 0 0 011 13345678999999987765432 22222 22444444433
Q ss_pred -------HhCCCCEEEEeCCCcc
Q 024643 222 -------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 -------~~~gl~~tivRPg~l~ 237 (265)
...|+++++||||++.
T Consensus 159 ~~la~e~~~~gi~v~~v~Pg~v~ 181 (246)
T 2ag5_A 159 KSVAADFIQQGIRCNCVCPGTVD 181 (246)
T ss_dssp HHHHHHHGGGTEEEEEEEESCEE
T ss_pred HHHHHHhhhcCcEEEEEeeCcCc
Confidence 3469999999999863
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-14 Score=128.55 Aligned_cols=137 Identities=14% Similarity=0.138 Sum_probs=101.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+..+++|++|++++.++++ .+|
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 45578999999999999999999999999999999998665443 35678899999999999887775 789
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
++|++.+ . + +...+++.+..+||++||..++.+......|.. .|.
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a-----sKa 178 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVA-----SKG 178 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHH-----HHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHH-----HHH
Confidence 9998721 0 0 111144566779999999988765443333322 343
Q ss_pred HHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 216 QDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..+. .+...|+++++|+||++.
T Consensus 179 a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 207 (277)
T 4dqx_A 179 AISSLTRAMAMDHAKEGIRVNAVAPGTID 207 (277)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcCc
Confidence 3333 334479999999999873
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.61 E-value=8.2e-15 Score=125.79 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=91.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++|+||||+|+||++++++|+++|++|+++ .|+.+..+.. .+..+.++.+|++|++++.++++ +
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999 5565443322 24568899999999999988776 7
Q ss_pred CCEEEEcCch-----H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSEG-----F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~~-----~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+. + +...+++.+.++||++||.....+.+....|. ..
T Consensus 84 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~s 158 (247)
T 2hq1_A 84 IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYA-----AS 158 (247)
T ss_dssp CCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHH-----HH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhH-----HH
Confidence 8999987210 0 11113446778999999986543332222222 24
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...|.+ +...++++++++||++.
T Consensus 159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 189 (247)
T 2hq1_A 159 KAGLIGFTKSIAKEFAAKGIYCNAVAPGIIK 189 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEEEEEEe
Confidence 4444443 33468999999999863
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=127.03 Aligned_cols=137 Identities=15% Similarity=0.094 Sum_probs=100.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..++++.+|++|.+++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45678999999999999999999999999999999998765433 24578899999999999887765
Q ss_pred CCCEEEEcCch------H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSEG------F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~~------~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+. + +...+++.+.++||++||..++.+......|..
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a---- 181 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTA---- 181 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHH----
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHH----
Confidence 48999987210 0 111144567789999999988765443333322
Q ss_pred HHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 182 -sKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~ 213 (262)
T 3rkr_A 182 -SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVR 213 (262)
T ss_dssp -HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred -HHHHHHHHHHHHHHHhhhcCcEEEEEecCCCc
Confidence 3333333 334579999999999874
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-14 Score=126.45 Aligned_cols=137 Identities=12% Similarity=0.081 Sum_probs=102.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|.+++.++++ .+|
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 8 ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45678999999999999999999999999999999998765443 35678999999999999988776 789
Q ss_pred EEEEcC----c-h--------------H---------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 166 SIICPS----E-G--------------F---------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 166 ~vi~~~----~-~--------------~---------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
++|++. . . + +.. .+++.+..+||++||..++........|.. .
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a-----s 162 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYAC-----T 162 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHH-----H
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHH-----H
Confidence 999871 1 0 0 111 135677789999999988765443333322 3
Q ss_pred HHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
|...+. .+...|+++++|+||++.
T Consensus 163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 193 (271)
T 3tzq_B 163 KAAIETLTRYVATQYGRHGVRCNAIAPGLVR 193 (271)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhcCEEEEEEEeCCCc
Confidence 433333 334479999999999874
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.5e-15 Score=136.14 Aligned_cols=137 Identities=8% Similarity=-0.011 Sum_probs=99.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhhc------CC-ccEEeeeCCCCHHHHHHHHcC--CC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMESF------GT-YVESMAGDASNKKFLKTALRG--VR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~~------~~-~v~~i~~D~~d~~~l~~~~~~--~d 165 (265)
++|+||||+||||++++++|+++|++|++++|+..+ ...+. +. +++++.+|+.|.+++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 689999999999999999999999999999998754 22221 12 688999999999999999986 59
Q ss_pred EEEEcCc----h------------------HHHHHHHhCCCC-----EEEEecccccccCCCCc----ccccchhHH-HH
Q 024643 166 SIICPSE----G------------------FISNAGSLKGVQ-----HVILLSQLSVYRGSGGI----QALMKGNAR-KL 213 (265)
Q Consensus 166 ~vi~~~~----~------------------~~~~aa~~~gv~-----r~V~iSS~~v~~~~~~~----~~~~~~~~~-~~ 213 (265)
+||++.. . .+.+++...+++ +||++||.++|...... .+..+...| ..
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~s 188 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAAS 188 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHH
Confidence 9998721 0 123345555554 99999999988643210 011122223 47
Q ss_pred HHHHHHHHHh----CCCCEEEEeCCCc
Q 024643 214 AEQDESMLMA----SGIPYTIIRTGVL 236 (265)
Q Consensus 214 k~~~E~~l~~----~gl~~tivRPg~l 236 (265)
|..+|.+++. .+++++++|+..+
T Consensus 189 K~~~E~~~~~~~~~~~~~~~~~r~~~~ 215 (381)
T 1n7h_A 189 KCAAHWYTVNYREAYGLFACNGILFNH 215 (381)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHhCCcEEEEEeCce
Confidence 8888887754 4899999998764
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-14 Score=125.25 Aligned_cols=136 Identities=17% Similarity=0.145 Sum_probs=99.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 4568999999999999999999999999999999998665433 24578999999999999988876 7999
Q ss_pred EEEcCc----------------h---H-------------HHHH----HHhC------CCCEEEEecccccccCCCCccc
Q 024643 167 IICPSE----------------G---F-------------ISNA----GSLK------GVQHVILLSQLSVYRGSGGIQA 204 (265)
Q Consensus 167 vi~~~~----------------~---~-------------~~~a----a~~~------gv~r~V~iSS~~v~~~~~~~~~ 204 (265)
+|++.+ . + +..+ +++. +.++||++||..++.+..+...
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~ 169 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA 169 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCch
Confidence 998721 0 0 1111 2233 6789999999987765433323
Q ss_pred ccchhHHHHHHHHH-------HHHHhCCCCEEEEeCCCcc
Q 024643 205 LMKGNARKLAEQDE-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~~~~k~~~E-------~~l~~~gl~~tivRPg~l~ 237 (265)
|.. .|...+ ..+...++++++|+||++.
T Consensus 170 Y~~-----sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 204 (265)
T 2o23_A 170 YSA-----SKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG 204 (265)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred hHH-----HHHHHHHHHHHHHHHHhhcCcEEEEEEecccc
Confidence 322 333333 2344579999999999873
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=8e-15 Score=131.94 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=96.6
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch----hhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESF-GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
....+|+|+||||||+||++++++|+++|++|++++|+.... ..+. ..+++++.+|+.|. .+.++|+||+
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih 97 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYH 97 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEE
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEE
Confidence 345678999999999999999999999999999999975321 1111 35689999999875 3678999998
Q ss_pred cCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCC--c--------ccccchhHH-HHHHH
Q 024643 170 PSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGG--I--------QALMKGNAR-KLAEQ 216 (265)
Q Consensus 170 ~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~--~--------~~~~~~~~~-~~k~~ 216 (265)
+.. . .+.+++++.++ +||++||.++|..... . .+..+...| ..|..
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~ 176 (343)
T 2b69_A 98 LASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRV 176 (343)
T ss_dssp CCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHH
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHH
Confidence 721 0 13344666676 9999999988854321 0 122222333 47888
Q ss_pred HHHHHH----hCCCCEEEEeCCCcc
Q 024643 217 DESMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~----~~gl~~tivRPg~l~ 237 (265)
+|++++ +.+++++++||+.+.
T Consensus 177 ~E~~~~~~~~~~~~~~~ilrp~~v~ 201 (343)
T 2b69_A 177 AETMCYAYMKQEGVEVRVARIFNTF 201 (343)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEE
T ss_pred HHHHHHHHHHHhCCcEEEEEEccee
Confidence 888764 369999999999864
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=6.4e-15 Score=129.62 Aligned_cols=137 Identities=12% Similarity=0.163 Sum_probs=98.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 35578999999999999999999999999999999997654332 14568899999999999887775
Q ss_pred CCCEEEEcCc-----h--------H-------------HHHH------HHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 GVRSIICPSE-----G--------F-------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~~a------a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
++|++|++.+ . + +..+ +++.+.++||++||...+........|.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~---- 174 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYS---- 174 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHH----
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHH----
Confidence 6899998721 0 0 1111 2233568999999987765433322222
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 175 -asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 207 (277)
T 2rhc_B 175 -ASKHGVVGFTKALGLELARTGITVNAVCPGFVE 207 (277)
T ss_dssp -HHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBC
T ss_pred -HHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCc
Confidence 244433333 33468999999999873
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-14 Score=124.58 Aligned_cols=136 Identities=16% Similarity=0.145 Sum_probs=98.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc---CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~ 171 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.+. ..+++++.+|++|++++.++++ .+|++|++.
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~A 84 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA 84 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECC
Confidence 45689999999999999999999999999999999876654331 1357788999999999999886 479999872
Q ss_pred c-----h--------H-------------HHH----HHHhCC-CCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 172 E-----G--------F-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 172 ~-----~--------~-------------~~~----aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
+ . + +.. .+++.+ .++||++||..++.+..+...|. ..|...|.+
T Consensus 85 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK~a~~~~ 159 (244)
T 3d3w_A 85 AVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYC-----STKGALDML 159 (244)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHH-----HHHHHHHHH
T ss_pred ccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHH-----HHHHHHHHH
Confidence 1 0 0 011 123345 68999999988765543322222 245555544
Q ss_pred H-------HhCCCCEEEEeCCCcc
Q 024643 221 L-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l-------~~~gl~~tivRPg~l~ 237 (265)
. ...++++++||||++.
T Consensus 160 ~~~la~e~~~~~i~v~~v~Pg~v~ 183 (244)
T 3d3w_A 160 TKVMALELGPHKIRVNAVNPTVVM 183 (244)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBT
T ss_pred HHHHHHHhcccCeEEEEEEecccc
Confidence 3 2368999999999874
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=8e-15 Score=132.95 Aligned_cols=138 Identities=12% Similarity=0.005 Sum_probs=98.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-----hhhc------CCccEEeeeCCCCHHHHHHHHcC--CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-----MESF------GTYVESMAGDASNKKFLKTALRG--VR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-----~~~~------~~~v~~i~~D~~d~~~l~~~~~~--~d 165 (265)
+|+|+||||+|+||++++++|+++|++|++++|+.... ..+. +.+++++.+|++|.+++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999986431 1111 24688999999999999999986 69
Q ss_pred EEEEcCc---------h-------------HHHHHHHhCCC---CEEEEecccccccCCCC--c---ccccchh-HHHHH
Q 024643 166 SIICPSE---------G-------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--I---QALMKGN-ARKLA 214 (265)
Q Consensus 166 ~vi~~~~---------~-------------~~~~aa~~~gv---~r~V~iSS~~v~~~~~~--~---~~~~~~~-~~~~k 214 (265)
+|||+.. . .+.+++...++ ++||++||.++|..... . .+..+.. +...|
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK 160 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHH
Confidence 9998721 0 13345667777 89999999988864321 0 1111222 23478
Q ss_pred HHHHHHHHh----CCCCEEEEeCCCc
Q 024643 215 EQDESMLMA----SGIPYTIIRTGVL 236 (265)
Q Consensus 215 ~~~E~~l~~----~gl~~tivRPg~l 236 (265)
..+|.+++. .+++++++|+..+
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~r~~~~ 186 (372)
T 1db3_A 161 LYAYWITVNYRESYGMYACNGILFNH 186 (372)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEECCc
Confidence 888877654 5899999998764
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.61 E-value=9e-15 Score=128.76 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=97.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c-CCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F-GTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~-~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. . ...+.++.+|++|++++.++++ +
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSAR 105 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 35578999999999999999999999999999999987654432 1 1268889999999999887775 6
Q ss_pred CCEEEEcCc------------h-H-----------------HHHHHHhCCC----CEEEEecccccccCCCCcc-cccch
Q 024643 164 VRSIICPSE------------G-F-----------------ISNAGSLKGV----QHVILLSQLSVYRGSGGIQ-ALMKG 208 (265)
Q Consensus 164 ~d~vi~~~~------------~-~-----------------~~~aa~~~gv----~r~V~iSS~~v~~~~~~~~-~~~~~ 208 (265)
+|++|++.+ . + +...+++.+. ++||++||..++...+... .|.
T Consensus 106 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~-- 183 (276)
T 2b4q_A 106 LDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYG-- 183 (276)
T ss_dssp CSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHH--
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccH--
Confidence 899998721 0 0 1111334444 8999999998765443222 222
Q ss_pred hHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 184 ---asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~ 216 (276)
T 2b4q_A 184 ---PSKAALHQLSRMLAKELVGEHINVNVIAPGRFP 216 (276)
T ss_dssp ---HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred ---HHHHHHHHHHHHHHHHhcccCeEEEEEEeccCc
Confidence 244444333 34479999999999874
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.61 E-value=1.7e-14 Score=126.18 Aligned_cols=130 Identities=8% Similarity=0.102 Sum_probs=96.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++ +..+.++.+|++|++++.++++ ++|++|+
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 356899999999999999999999999999999998754 3568899999999999888775 6899998
Q ss_pred cCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 170 PSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 170 ~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
+.+ . + +...+++.+.++||++||..++....+...|. ..|...+.
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a~~~ 155 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYV-----TSKHAVIG 155 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHH-----HHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHH-----HHHHHHHH
Confidence 721 0 0 11113456678999999998775543332222 24444443
Q ss_pred HH-------HhCCCCEEEEeCCCcc
Q 024643 220 ML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l-------~~~gl~~tivRPg~l~ 237 (265)
+. ... +++++|+||++.
T Consensus 156 ~~~~la~e~~~~-i~vn~v~PG~v~ 179 (264)
T 2dtx_A 156 LTKSIALDYAPL-LRCNAVCPATID 179 (264)
T ss_dssp HHHHHHHHHTTT-SEEEEEEECSBC
T ss_pred HHHHHHHHhcCC-cEEEEEEeCCCc
Confidence 33 234 999999999873
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.8e-15 Score=128.24 Aligned_cols=138 Identities=13% Similarity=0.147 Sum_probs=97.6
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
....+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ ++
T Consensus 23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 345678999999999999999999999999999999998765543 35678999999999999887775 78
Q ss_pred CEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+. + +...+++.+.++||++||...+........|.. .|
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a-----sK 177 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCA-----AK 177 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHH-----HH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHH-----HH
Confidence 999987210 0 111244567789999999887655433322222 33
Q ss_pred HHHH-------HHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDE-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E-------~~l~~~gl~~tivRPg~l~ 237 (265)
...+ ..+...|+++++|+||++.
T Consensus 178 aa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 207 (266)
T 3grp_A 178 AGLIGFSKALAQEIASRNITVNCIAPGFIK 207 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeeCcCC
Confidence 3333 2334579999999999863
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.61 E-value=6.7e-15 Score=127.47 Aligned_cols=142 Identities=15% Similarity=0.218 Sum_probs=100.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. ....+..+++|++|++++.++++ ++|
T Consensus 6 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 6 NLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 34678999999999999999999999999999999998665433 23457889999999999888775 789
Q ss_pred EEEEcCc-----h--------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HH
Q 024643 166 SIICPSE-----G--------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KL 213 (265)
Q Consensus 166 ~vi~~~~-----~--------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~ 213 (265)
++|++.+ . + + ...+++.+..+||++||...+.+.++...|..++.. ..
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l 165 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGF 165 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHH
Confidence 9998721 0 0 1 111344667899999998876654433333322211 11
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+.....+...|++++.|+||++.
T Consensus 166 ~~~la~e~~~~gi~vn~v~PG~v~ 189 (248)
T 3op4_A 166 TKSMAREVASRGVTVNTVAPGFIE 189 (248)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBS
T ss_pred HHHHHHHHHHhCeEEEEEeeCCCC
Confidence 122223344579999999999874
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.61 E-value=1.2e-14 Score=126.33 Aligned_cols=141 Identities=16% Similarity=0.146 Sum_probs=97.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------CC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------GV 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------~~ 164 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 3578999999999999999999999999999999998765543 24578999999999999988876 67
Q ss_pred CEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|++|++.+ . + +...+++.+..+||++||...+.+.+....|..++.. .
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 164 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRA 164 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHH
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHH
Confidence 99998721 0 0 1112455667899999998877654433333222211 1
Q ss_pred HHHHHHHHHHhCCCCE-EEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPY-TIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~-tivRPg~l~ 237 (265)
..+.....+...|+++ ++|.||++.
T Consensus 165 l~~~la~e~~~~gi~v~n~v~PG~v~ 190 (252)
T 3h7a_A 165 VAQSMARELMPKNIHVAHLIIDSGVD 190 (252)
T ss_dssp HHHHHHHHHGGGTEEEEEEEEC----
T ss_pred HHHHHHHHhhhcCCEEEEEecCCccC
Confidence 1122223344578999 899999863
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.61 E-value=8.2e-15 Score=125.92 Aligned_cols=131 Identities=15% Similarity=0.234 Sum_probs=93.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-------cCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-------RGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-------~~~d~vi~~~ 171 (265)
+++++||||+|+||++++++|+++|++|++++|+.++..+.. ++..+.+|++| +++.+++ .++|++|++.
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~A 78 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSL--GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAA 78 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH--TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhh--CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECC
Confidence 578999999999999999999999999999999987643323 37889999998 7665544 3789999872
Q ss_pred c-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCC--CCcccccchhHHHHHHHHHH
Q 024643 172 E-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGS--GGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 172 ~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~--~~~~~~~~~~~~~~k~~~E~ 219 (265)
+ . + +...+++.+.++||++||..++... .+...|. ..|...+.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~-----~sK~a~~~ 153 (239)
T 2ekp_A 79 AVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYT-----TAKTALLG 153 (239)
T ss_dssp CCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHH-----HHHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHH-----HHHHHHHH
Confidence 1 0 0 1112445678899999999887543 2222222 24433333
Q ss_pred -------HHHhCCCCEEEEeCCCcc
Q 024643 220 -------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 -------~l~~~gl~~tivRPg~l~ 237 (265)
.+...|+++++|+||++.
T Consensus 154 ~~~~la~e~~~~gi~v~~v~Pg~v~ 178 (239)
T 2ekp_A 154 LTRALAKEWARLGIRVNLLCPGYVE 178 (239)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHhhhcCcEEEEEEeCCcc
Confidence 344579999999999873
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.1e-14 Score=126.94 Aligned_cols=141 Identities=16% Similarity=0.162 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ +
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 84 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3568999999999999999999999999999999987654432 13468889999999998877665 7
Q ss_pred CCEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 164 VRSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 164 ~d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
+|++|++.+ .+ ....+++.+.++||++||..++...+....|..++..
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 164 (262)
T 1zem_A 85 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAI 164 (262)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHH
Confidence 899998621 00 0111344567899999998776554333233222211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 165 ~~~~~~la~e~~~~gi~vn~v~PG~v~ 191 (262)
T 1zem_A 165 IALTETAALDLAPYNIRVNAISPGYMG 191 (262)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhhCeEEEEEecCCcC
Confidence 11122233345579999999999873
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=126.09 Aligned_cols=137 Identities=9% Similarity=0.122 Sum_probs=101.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 45678999999999999999999999999999999988655432 24578899999999999887775
Q ss_pred CCCEEEEcCc------------hH-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 163 GVRSIICPSE------------GF-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 163 ~~d~vi~~~~------------~~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
.+|++|++.+ .+ + ...+++.+..+||++||...+.+......|.. .
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a-----s 163 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGS-----S 163 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHH-----H
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHH-----H
Confidence 7899998711 00 1 11145567789999999988765443333322 3
Q ss_pred HHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
|...+. .+...|++++.|+||++.
T Consensus 164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 194 (256)
T 3gaf_A 164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIK 194 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEEcccc
Confidence 433333 334479999999999863
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-14 Score=127.95 Aligned_cols=138 Identities=17% Similarity=0.204 Sum_probs=99.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
....+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|.+++.++++
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH 119 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc
Confidence 345578999999999999999999999999999998887654332 14568899999999999988774
Q ss_pred -CCCEEEEcCc-------------hH-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSE-------------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~-------------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
++|++|++.+ .+ +...+++.+.++||++||..++.+......|.
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~----- 194 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYS----- 194 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHH-----
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHH-----
Confidence 6899998721 00 11123456778999999987765443322222
Q ss_pred HHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 195 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 227 (285)
T 2c07_A 195 SSKAGVIGFTKSLAKELASRNITVNAIAPGFIS 227 (285)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEe
Confidence 23433333 234469999999999873
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=128.80 Aligned_cols=138 Identities=18% Similarity=0.171 Sum_probs=98.9
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc------C-CccEEeeeCCCCHHHHHHHHc-----
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~------~-~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
....+++++||||+|+||++++++|+++|++|++++|+.++.++.. + ..+.++++|++|++++.++++
T Consensus 37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA 116 (293)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999987654331 1 468899999999998877664
Q ss_pred --CCCEEEEcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccc-cCCCCcccccchh
Q 024643 163 --GVRSIICPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVY-RGSGGIQALMKGN 209 (265)
Q Consensus 163 --~~d~vi~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~-~~~~~~~~~~~~~ 209 (265)
.+|++|++.+ . + +.. .+++.+.++||++||.... ...+....|.
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~--- 193 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYG--- 193 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHH---
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHH---
Confidence 6799998711 0 0 111 1345677899999998764 3322222222
Q ss_pred HHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 194 --asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 226 (293)
T 3rih_A 194 --ASKAAQLGFMRTAAIELAPRGVTVNAILPGNIL 226 (293)
T ss_dssp --HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred --HHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCc
Confidence 24433333 334579999999999874
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=125.22 Aligned_cols=142 Identities=14% Similarity=0.091 Sum_probs=95.1
Q ss_pred CCCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCC-CHHHHHHHHcCCCEEEEcC
Q 024643 93 EFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-NKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 93 ~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~-d~~~l~~~~~~~d~vi~~~ 171 (265)
......+++|+||||+|+||++++++|+++|++|++++|+.+..+++ ..+.++ +|+. +.+.+.+.+.++|++|++.
T Consensus 13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~--~~~~~~-~D~~~~~~~~~~~~~~iD~lv~~A 89 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS--GHRYVV-CDLRKDLDLLFEKVKEVDILVLNA 89 (249)
T ss_dssp ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT--CSEEEE-CCTTTCHHHHHHHSCCCSEEEECC
T ss_pred HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh--CCeEEE-eeHHHHHHHHHHHhcCCCEEEECC
Confidence 44566789999999999999999999999999999999997555443 256667 9983 3444445555899999872
Q ss_pred c-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHHHHHHH
Q 024643 172 E-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDES 219 (265)
Q Consensus 172 ~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~E~ 219 (265)
+ . + +...+++.+.++||++||..++.+......|..++.. ...+....
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~ 169 (249)
T 1o5i_A 90 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSF 169 (249)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 1 0 0 1222556678899999999887654433233222211 11122223
Q ss_pred HHHhCCCCEEEEeCCCcc
Q 024643 220 MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l~~~gl~~tivRPg~l~ 237 (265)
.+...|+++++|+||++.
T Consensus 170 e~~~~gi~v~~v~Pg~v~ 187 (249)
T 1o5i_A 170 EVAPYGITVNCVAPGWTE 187 (249)
T ss_dssp HHGGGTEEEEEEEECSBC
T ss_pred HhhhcCeEEEEEeeCCCc
Confidence 344579999999999874
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=127.85 Aligned_cols=138 Identities=12% Similarity=0.162 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHcC-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRG----- 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~~----- 163 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.... .+..+.++.+|++|.+++.++++.
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 34578999999999999999999999999999999997654322 156789999999999998887754
Q ss_pred --CCEEEEcCc--------h-----H-------------HHH----HHH-hCCCCEEEEecccccccCCCCcccccchhH
Q 024643 164 --VRSIICPSE--------G-----F-------------ISN----AGS-LKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 164 --~d~vi~~~~--------~-----~-------------~~~----aa~-~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
+|++|++.+ . + +.. .+. ..+.++||++||..++.+..+...|.
T Consensus 103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~---- 178 (302)
T 1w6u_A 103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSA---- 178 (302)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHH----
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhH----
Confidence 599998721 0 0 111 122 34567999999987765543332222
Q ss_pred HHHHHHHHHHH-------HhCCCCEEEEeCCCccC
Q 024643 211 RKLAEQDESML-------MASGIPYTIIRTGVLQN 238 (265)
Q Consensus 211 ~~~k~~~E~~l-------~~~gl~~tivRPg~l~~ 238 (265)
..|...+.+. ...|+++++||||++..
T Consensus 179 -~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t 212 (302)
T 1w6u_A 179 -SAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKT 212 (302)
T ss_dssp -HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC
T ss_pred -HHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCC
Confidence 2444444433 33799999999998743
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=125.50 Aligned_cols=134 Identities=12% Similarity=0.069 Sum_probs=96.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++ ++... .. .++++|++|++++.++++ .+|++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356899999999999999999999999999999998765 32211 13 788999999998887765 68999
Q ss_pred EEcCc-----h--------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 168 ICPSE-----G--------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 168 i~~~~-----~--------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|++.+ . + + ...+++.+.++||++||...+.+.+....|. ..|...
T Consensus 82 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a~ 156 (256)
T 2d1y_A 82 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYN-----ASKGGL 156 (256)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHH-----HHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHH-----HHHHHH
Confidence 98721 0 0 1 1124456778999999987765433322222 244444
Q ss_pred HHH-------HHhCCCCEEEEeCCCcc
Q 024643 218 ESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~-------l~~~gl~~tivRPg~l~ 237 (265)
+.+ +...|+++++|+||++.
T Consensus 157 ~~~~~~la~e~~~~gi~v~~v~Pg~v~ 183 (256)
T 2d1y_A 157 VNLTRSLALDLAPLRIRVNAVAPGAIA 183 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhcCeEEEEEeeCCcc
Confidence 433 33469999999999863
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.60 E-value=1.6e-14 Score=128.57 Aligned_cols=135 Identities=10% Similarity=0.153 Sum_probs=97.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCC---ccEEeeeCCCCHHHHHHHHc-----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~---~v~~i~~D~~d~~~l~~~~~----- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+. .+.++.+|++|++++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 5578999999999999999999999999999999997654432 122 68899999999999887775
Q ss_pred --CCCEEEEcCc-----h--H-------------------------HHHHHHhCCCCEEEEecccccccCC-CCcccccc
Q 024643 163 --GVRSIICPSE-----G--F-------------------------ISNAGSLKGVQHVILLSQLSVYRGS-GGIQALMK 207 (265)
Q Consensus 163 --~~d~vi~~~~-----~--~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~-~~~~~~~~ 207 (265)
++|++|++.+ . + +...+++.+ ++||++||..++... +....|.
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~- 181 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA- 181 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH-
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHH-
Confidence 7899998711 1 1 111134455 899999998876543 2222222
Q ss_pred hhHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 208 GNARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 182 ----asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~ 214 (297)
T 1xhl_A 182 ----CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA 214 (297)
T ss_dssp ----HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred ----HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence 23433333 334579999999999873
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.60 E-value=1.4e-14 Score=125.17 Aligned_cols=132 Identities=14% Similarity=0.204 Sum_probs=92.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.+.. ..+.+|++|++++.++++ .+|++|
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 86 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 86 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----cCeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34578999999999999999999999999999999988665432 248899999999887765 579999
Q ss_pred EcCc----h---------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSE----G---------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~----~---------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+ . + + ...+++.+.++||++||...+...+....|. ..|...+
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a~~ 161 (247)
T 1uzm_A 87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYA-----ASKAGVI 161 (247)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHH-----HHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHH-----HHHHHHH
Confidence 7621 0 0 1 1124456778999999987764433222222 2343333
Q ss_pred H-------HHHhCCCCEEEEeCCCcc
Q 024643 219 S-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~-------~l~~~gl~~tivRPg~l~ 237 (265)
. .+...|+++++|+||++.
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~PG~v~ 187 (247)
T 1uzm_A 162 GMARSIARELSKANVTANVVAPGYID 187 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCCCc
Confidence 3 334579999999999873
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.60 E-value=7.2e-15 Score=125.95 Aligned_cols=134 Identities=15% Similarity=0.194 Sum_probs=95.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++|+||||+|+||++++++|+++|++|+++ .|+.++.+.. .+..+.++.+|++|++++.++++ ++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999999995 6776544322 24568889999999999988876 68
Q ss_pred CEEEEcCc-------------hH-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSE-------------GF-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~-------------~~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+ .+ +.. .+++.+.++||++||...+.+.+....|.. .|
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~-----sK 155 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAA-----AK 155 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH-----HH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchh-----hH
Confidence 99998721 00 111 133457789999999876544333222222 33
Q ss_pred HHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 215 EQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
...+. .+...|++++++|||++.
T Consensus 156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 185 (244)
T 1edo_A 156 AGVIGFSKTAAREGASRNINVNVVCPGFIA 185 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEeeCccc
Confidence 33332 233479999999999863
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.3e-14 Score=127.90 Aligned_cols=137 Identities=19% Similarity=0.175 Sum_probs=100.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+|
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34578999999999999999999999999999999998665433 35678999999999998887765 689
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
++|++.+ . + +...+++.+..+||++||...+........|.. .|.
T Consensus 106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a-----sKa 180 (277)
T 3gvc_A 106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGM-----SKA 180 (277)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHH-----HHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHH-----HHH
Confidence 9998711 0 0 111144566789999999887665443333322 443
Q ss_pred HHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 216 QDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..+. .+...|+++++|+||++.
T Consensus 181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~ 209 (277)
T 3gvc_A 181 GIIQLSRITAAELRSSGIRSNTLLPAFVD 209 (277)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhcccCeEEEEEeeCCcc
Confidence 3333 344579999999999873
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.60 E-value=5.1e-15 Score=130.25 Aligned_cols=133 Identities=12% Similarity=0.127 Sum_probs=97.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---C--CccEEeeeCCCCHHHHHHHHcC-------CCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---G--TYVESMAGDASNKKFLKTALRG-------VRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~--~~v~~i~~D~~d~~~l~~~~~~-------~d~v 167 (265)
++++||||+|+||++++++|+++|++|++++|+.++.++.. . ..+.++.+|++|++++.++++. +|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 78999999999999999999999999999999976654321 1 3688999999999999988865 4999
Q ss_pred EEcC----c--hH-------------------------HHHHHHhCCCC-EEEEecccccccCCCCcccccchhHHHHHH
Q 024643 168 ICPS----E--GF-------------------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 168 i~~~----~--~~-------------------------~~~aa~~~gv~-r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
|++. . .+ +...+++.+.+ +||++||...+.+.+....| ...|.
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y-----~asKa 176 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVY-----GGTKA 176 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHH-----HHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchH-----HHHHH
Confidence 9871 1 00 11124455677 99999998876543322222 23555
Q ss_pred HHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 216 QDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
..+.+.+ ..|+++++|+||++.
T Consensus 177 a~~~l~~~la~el~~~gIrvn~v~PG~v~ 205 (272)
T 2nwq_A 177 FVEQFSLNLRCDLQGTGVRVTNLEPGLCE 205 (272)
T ss_dssp HHHHHHHHHHTTCTTSCCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHhCccCeEEEEEEcCCCc
Confidence 5555443 368999999999874
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=126.18 Aligned_cols=142 Identities=15% Similarity=0.256 Sum_probs=101.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++ .+|
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 34678999999999999999999999999999999998765443 35678999999999999888775 789
Q ss_pred EEEEcCc-----h--------H-------------HHH----HHHhCC-CCEEEEecccccccCCCCcccccchhHH--H
Q 024643 166 SIICPSE-----G--------F-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 166 ~vi~~~~-----~--------~-------------~~~----aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
++|++.+ . + +.. .+++.+ ..+||++||...+.+.+....|..++.. .
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 162 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG 162 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence 9998721 0 0 111 144444 6799999998877654433333222211 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|++++.|+||++.
T Consensus 163 ~~~~la~e~~~~gi~vn~v~PG~v~ 187 (247)
T 3rwb_A 163 FTRALATELGKYNITANAVTPGLIE 187 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCc
Confidence 1122233344579999999999873
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.5e-14 Score=127.24 Aligned_cols=135 Identities=10% Similarity=0.143 Sum_probs=96.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c--CC---ccEEeeeCCCCHHHHHHHHc-----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F--GT---YVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~--~~---~v~~i~~D~~d~~~l~~~~~----- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. . +. .+.++.+|++|++++.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 3568999999999999999999999999999999998655432 1 22 68899999999998887765
Q ss_pred --CCCEEEEcCc-----h----H---------------------H----HHHHHhCCCCEEEEecccccccCC-CCcccc
Q 024643 163 --GVRSIICPSE-----G----F---------------------I----SNAGSLKGVQHVILLSQLSVYRGS-GGIQAL 205 (265)
Q Consensus 163 --~~d~vi~~~~-----~----~---------------------~----~~aa~~~gv~r~V~iSS~~v~~~~-~~~~~~ 205 (265)
.+|++|++.+ . + + ...+++.+ ++||++||..++... +....|
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y 162 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY 162 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHH
Confidence 6899998721 1 1 0 11133345 899999998876544 322222
Q ss_pred cchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 206 MKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
. ..|...+.+ +...|+++++|+||++.
T Consensus 163 ~-----asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 196 (280)
T 1xkq_A 163 A-----IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE 196 (280)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred H-----HHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCc
Confidence 2 234333333 34579999999999873
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-14 Score=124.71 Aligned_cols=136 Identities=16% Similarity=0.249 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.. ...+.++.+|++|++++.++++ ++|++|
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---DPDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---STTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---cCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 345789999999999999999999999999999999876543 3468899999999999888776 799999
Q ss_pred EcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+ . + +.. .+++.+.++||++||..++...... +. ..+...|...+
T Consensus 102 ~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~-~~--~~Y~~sKaa~~ 178 (260)
T 3un1_A 102 NNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGM-PS--ALASLTKGGLN 178 (260)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTC-CC--HHHHHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCC-cc--HHHHHHHHHHH
Confidence 8721 0 0 111 1356778899999998775432211 11 11112454444
Q ss_pred HHH-------HhCCCCEEEEeCCCcc
Q 024643 219 SML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l-------~~~gl~~tivRPg~l~ 237 (265)
.+. ...|+++++|+||++.
T Consensus 179 ~l~~~la~e~~~~gI~vn~v~PG~v~ 204 (260)
T 3un1_A 179 AVTRSLAMEFSRSGVRVNAVSPGVIK 204 (260)
T ss_dssp HHHHHHHHHTTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHhCcCCeEEEEEeecCCC
Confidence 443 2358999999999874
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.59 E-value=5.9e-15 Score=126.70 Aligned_cols=131 Identities=9% Similarity=0.115 Sum_probs=94.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc----CCCEEEEcCc--h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR----GVRSIICPSE--G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~----~~d~vi~~~~--~ 173 (265)
++|+||||+|+||++++++|+++|++|++++|+.++... .+.+|++|.+++.++++ ++|++|++.+ .
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV 74 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------cccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence 589999999999999999999999999999998765431 16789999999998886 8999998721 0
Q ss_pred ----H-------------HHH----HHHhCCCCEEEEecccccccCCCCccc--------------------ccchhHH-
Q 024643 174 ----F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQA--------------------LMKGNAR- 211 (265)
Q Consensus 174 ----~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~--------------------~~~~~~~- 211 (265)
+ +.. .+++.+.++||++||..++.......+ ..+...|
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~ 154 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYA 154 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHH
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHH
Confidence 0 112 233456789999999988764311000 0111222
Q ss_pred HHHHHHHHHHHh-------CCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMA-------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~-------~gl~~tivRPg~l~ 237 (265)
..|...|.+++. .|++++++|||++.
T Consensus 155 ~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~ 187 (255)
T 2dkn_A 155 GSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVE 187 (255)
T ss_dssp HHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHhhcCcEEEEEcCCccc
Confidence 366666665432 69999999999863
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.59 E-value=1e-14 Score=124.86 Aligned_cols=134 Identities=11% Similarity=0.164 Sum_probs=95.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEE-eeeCCCCHHHHHHHHc-------C
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVES-MAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~-i~~D~~d~~~l~~~~~-------~ 163 (265)
+++|+||||+|+||++++++|+++|++|+++ +|+.++.+.. .+..+.. +.+|++|.+++.++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999998 7876554332 1345666 8999999999887754 7
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ . + +...+++.+.++||++||...+.+.++...|. ..
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~s 155 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYV-----AS 155 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHH-----HH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchH-----HH
Confidence 999998721 0 0 11224556788999999987654433322222 23
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...|++++++|||++.
T Consensus 156 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 186 (245)
T 2ph3_A 156 KAGLIGFTRAVAKEYAQRGITVNAVAPGFIE 186 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEEEEeec
Confidence 4333332 33469999999999873
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.59 E-value=5e-15 Score=134.84 Aligned_cols=111 Identities=15% Similarity=0.137 Sum_probs=90.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------ 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------ 172 (265)
|+|+||||||+||++++++|+++|+ +|++++|+ .|++++.++++++|+||++..
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~ 61 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH 61 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence 6899999999999999999999998 66665443 789999999999999998721
Q ss_pred ------------hHHHHHHHhCCCC-EEEEecccccccCCCCcccccchhHHHHHHHHHHHHHh----CCCCEEEEeCCC
Q 024643 173 ------------GFISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA----SGIPYTIIRTGV 235 (265)
Q Consensus 173 ------------~~~~~aa~~~gv~-r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~----~gl~~tivRPg~ 235 (265)
..+.+++++.+++ +||++||.+++.. ..+...|..+|+++++ .+++++++||++
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~~---------~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~ 132 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQD---------NPYGESKLQGEQLLREYAEEYGNTVYIYRWPN 132 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGSC---------SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcCC---------CCchHHHHHHHHHHHHHHHHhCCCEEEEECCc
Confidence 1266778888888 9999999998761 1233477788888765 799999999998
Q ss_pred ccC
Q 024643 236 LQN 238 (265)
Q Consensus 236 l~~ 238 (265)
+..
T Consensus 133 v~G 135 (369)
T 3st7_A 133 LFG 135 (369)
T ss_dssp EEC
T ss_pred eeC
Confidence 653
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=126.84 Aligned_cols=135 Identities=15% Similarity=0.160 Sum_probs=96.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c----CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F----GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~----~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.... . +..+.++.+|++|++++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999999999999999987654321 1 2357889999999999887775
Q ss_pred CCCEEEEcCc-----hH-----------------HHHHHHhCC---CCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 163 GVRSIICPSE-----GF-----------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 163 ~~d~vi~~~~-----~~-----------------~~~aa~~~g---v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
.+|++|++.+ .+ +...+++.+ .++||++||..++.+.+....|.. .|...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-----sK~a~ 160 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA-----SKHGI 160 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH-----HHHHH
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH-----HHHHH
Confidence 4799998721 11 111233332 679999999988765433323322 33222
Q ss_pred ---------HHHHHhCCCCEEEEeCCCcc
Q 024643 218 ---------ESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 ---------E~~l~~~gl~~tivRPg~l~ 237 (265)
+..+...|+++++|+||++.
T Consensus 161 ~~~~~~~ala~e~~~~gi~v~~v~Pg~v~ 189 (267)
T 2gdz_A 161 VGFTRSAALAANLMNSGVRLNAICPGFVN 189 (267)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESCBS
T ss_pred HHHHHHHHHHHHhccCCcEEEEEecCcCc
Confidence 23345689999999999873
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=8.5e-15 Score=126.20 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=96.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++|+||||+|+||++++++|+++|++|++++|+ .++.+.. .+..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG 84 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999998 6554332 14568899999999999988886
Q ss_pred CCCEEEEcCch--------------H-------------HHH----HHHhCC--C---CEEEEeccccccc-CCCCcccc
Q 024643 163 GVRSIICPSEG--------------F-------------ISN----AGSLKG--V---QHVILLSQLSVYR-GSGGIQAL 205 (265)
Q Consensus 163 ~~d~vi~~~~~--------------~-------------~~~----aa~~~g--v---~r~V~iSS~~v~~-~~~~~~~~ 205 (265)
++|++|++.+. + +.. .+.+.+ . .+||++||...+. +.++...|
T Consensus 85 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y 164 (258)
T 3afn_B 85 GIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY 164 (258)
T ss_dssp SCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred CCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence 89999987211 0 000 122222 2 7999999987765 33222222
Q ss_pred cchhHHHHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 206 MKGNARKLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
...|...|.+. ...|+++++||||++.
T Consensus 165 -----~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~ 198 (258)
T 3afn_B 165 -----GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVD 198 (258)
T ss_dssp -----HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred -----HHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcc
Confidence 22454444443 3468999999999873
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.59 E-value=3.1e-14 Score=123.83 Aligned_cols=141 Identities=15% Similarity=0.172 Sum_probs=99.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR 83 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999998765433 24578899999999999887775 6
Q ss_pred CCEEEEcCc-----h--------H-------------HHHH----H-HhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 164 VRSIICPSE-----G--------F-------------ISNA----G-SLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~~~a----a-~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
+|++|++.+ . + +..+ + ++.+..+||++||...+...+....|..++..
T Consensus 84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 163 (257)
T 3imf_A 84 IDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV 163 (257)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHH
Confidence 899998721 0 0 1111 2 44557899999998887654433333222211
Q ss_pred -HHHHHHHHHHH-hCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLM-ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~-~~gl~~tivRPg~l~ 237 (265)
...+.....+. ..|+++++|+||++.
T Consensus 164 ~~l~~~la~e~~~~~gIrvn~v~PG~v~ 191 (257)
T 3imf_A 164 LAMTKTLAVEWGRKYGIRVNAIAPGPIE 191 (257)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCBS
T ss_pred HHHHHHHHHHhccccCeEEEEEEECCCc
Confidence 11111222232 569999999999874
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.59 E-value=2.6e-14 Score=127.31 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=100.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|.+++.++++
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 45678999999999999999999999999999999998765433 24578999999999999888775
Q ss_pred CCCEEEEcCc-----h--------H-------------HH----HHHHhCC-CCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSE-----G--------F-------------IS----NAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~----~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + +. ..+.+.+ ..+||++||...+.+.+....|..++..
T Consensus 108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 187 (301)
T 3tjr_A 108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYG 187 (301)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHH
Confidence 7899998721 0 0 11 1133444 5799999999887655433333322221
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.........+...|+++++|+||++.
T Consensus 188 ~~~~~~~la~e~~~~gi~v~~v~PG~v~ 215 (301)
T 3tjr_A 188 VVGLAETLAREVKPNGIGVSVLCPMVVE 215 (301)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEECCSCCC
T ss_pred HHHHHHHHHHHhcccCcEEEEEECCccc
Confidence 11122222344579999999999873
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.2e-14 Score=127.36 Aligned_cols=136 Identities=13% Similarity=0.165 Sum_probs=97.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|.+++.++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 4568999999999999999999999999999999987654432 14578999999999999887775 7
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ . + +...+++.+.++||++||..++.+......|. ..
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~-----~s 183 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYC-----SS 183 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHH-----HH
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHH-----HH
Confidence 899998721 0 0 11124456788999999988765432211221 24
Q ss_pred HHHHHHHH-------H---hCCCCEEEEeCCCcc
Q 024643 214 AEQDESML-------M---ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l-------~---~~gl~~tivRPg~l~ 237 (265)
|...+.+. . ..|+++++|+||++.
T Consensus 184 K~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~ 217 (272)
T 1yb1_A 184 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVN 217 (272)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCccc
Confidence 44443332 2 348999999999863
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.7e-14 Score=124.62 Aligned_cols=140 Identities=11% Similarity=0.097 Sum_probs=98.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35678999999999999999999999999999999998665432 24578899999999999887775
Q ss_pred CCCEEEEcCc---h-----------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 GVRSIICPSE---G-----------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 ~~d~vi~~~~---~-----------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + +. ..+++.+ .+||++||...+........|..++..
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa 166 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSA 166 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHH
Confidence 6899998721 0 0 00 1133334 799999999887654433333222211
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
...+.....+...|+++++|+||++
T Consensus 167 ~~~~~~~la~e~~~~gi~vn~v~PG~v 193 (264)
T 3ucx_A 167 LLAMSQTLATELGEKGIRVNSVLPGYI 193 (264)
T ss_dssp HHHHHHHHHHHHHTTTCEEEEEEESSC
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCcc
Confidence 1112222334457999999999987
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=1.4e-14 Score=125.47 Aligned_cols=133 Identities=14% Similarity=0.124 Sum_probs=97.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
|+++||||+|+||++++++|+++|++|++++|+.++.++. ....+.++.+|++|++++.++++ ++|++|+
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5799999999999999999999999999999998665433 23568899999999999998875 6899998
Q ss_pred cCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 170 PSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 170 ~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
+.+ .+ +...+++.+.++||++||...+.+.+....|. ..|...+
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asKaa~~ 155 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYG-----ATKAFVR 155 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH-----HHHHHHH
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHH-----HHHHHHH
Confidence 621 00 01113355678999999988765443322222 2444444
Q ss_pred HHH-------HhCCCCEEEEeCCCcc
Q 024643 219 SML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l-------~~~gl~~tivRPg~l~ 237 (265)
.+. ...|+++++|+||++.
T Consensus 156 ~~~~~la~e~~~~gi~v~~v~PG~v~ 181 (248)
T 3asu_A 156 QFSLNLRTDLHGTAVRVTDIEPGLVG 181 (248)
T ss_dssp HHHHHHHHHTTTSCCEEEEEEECSBC
T ss_pred HHHHHHHHHhhhcCcEEEEEeccccc
Confidence 433 3468999999999985
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.4e-14 Score=122.20 Aligned_cols=128 Identities=16% Similarity=0.242 Sum_probs=92.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc------CCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~------~~d~vi~~~~ 172 (265)
+++|+||||+|+||++++++|+++|++|++++|+.+ . ..+.++.+|++|++++.++++ ++|.+|++.+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 578999999999999999999999999999999875 2 346889999999999998887 7899998621
Q ss_pred -----------------hH-------------HHHH----HHhCC------CCEEEEecccccccCCCCcccccchhHHH
Q 024643 173 -----------------GF-------------ISNA----GSLKG------VQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 173 -----------------~~-------------~~~a----a~~~g------v~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+ +.++ +.+.+ .++||++||..++....+...|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~----- 150 (242)
T 1uay_A 76 VGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAA----- 150 (242)
T ss_dssp CCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHH-----
T ss_pred ccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhH-----
Confidence 11 1111 22222 239999999988765443333322
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++||||++.
T Consensus 151 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~ 182 (242)
T 1uay_A 151 SKGGVVALTLPAARELAGWGIRVVTVAPGLFD 182 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSCS
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeccCc
Confidence 3333333 334469999999999863
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.58 E-value=8.5e-15 Score=127.43 Aligned_cols=132 Identities=17% Similarity=0.234 Sum_probs=94.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.+ .+.++.+|++|++++.++++ .+|++|
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv 92 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLI 92 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 345689999999999999999999999999999999876543 37889999999999887775 469999
Q ss_pred EcCc-------------hH-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSE-------------GF-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~-------------~~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+ .+ + ...+++.+.++||++||...+...+....| ...|...+
T Consensus 93 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y-----~asK~a~~ 167 (253)
T 2nm0_A 93 ANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANY-----AASKAGLV 167 (253)
T ss_dssp EECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHH-----HHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHH-----HHHHHHHH
Confidence 7611 00 1 112344577899999998775432211112 12444444
Q ss_pred HH-------HHhCCCCEEEEeCCCcc
Q 024643 219 SM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+ +...|+++++|+||++.
T Consensus 168 ~~~~~la~e~~~~gi~vn~v~PG~v~ 193 (253)
T 2nm0_A 168 GFARSLARELGSRNITFNVVAPGFVD 193 (253)
T ss_dssp HHHHHHHHHHCSSSEEEEEEEECSBC
T ss_pred HHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence 33 33478999999999873
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.58 E-value=2.8e-14 Score=125.47 Aligned_cols=137 Identities=13% Similarity=0.148 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc------------chhh------hcCCccEEeeeCCCCHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR------------NAME------SFGTYVESMAGDASNKKFL 157 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~------------~~~~------~~~~~v~~i~~D~~d~~~l 157 (265)
...+++++||||+|+||++++++|+++|++|++++|+.. .... ..+..+.++++|++|++++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 456789999999999999999999999999999999732 1111 1345788999999999998
Q ss_pred HHHHc-------CCCEEEEcCc------------h-H-------------HHH----HHHhCCCCEEEEecccccccCCC
Q 024643 158 KTALR-------GVRSIICPSE------------G-F-------------ISN----AGSLKGVQHVILLSQLSVYRGSG 200 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~~~------------~-~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~ 200 (265)
.++++ .+|++|++.+ . + +.. .+++.+..+||++||..++....
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 166 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANF 166 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCT
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCC
Confidence 88775 7899998711 0 0 111 14456678999999998876544
Q ss_pred CcccccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 201 GIQALMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 201 ~~~~~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
....|. ..|...+.+ +...|+++++|+||++.
T Consensus 167 ~~~~Y~-----asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 205 (281)
T 3s55_A 167 AQASYV-----SSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIE 205 (281)
T ss_dssp TCHHHH-----HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred CCchhH-----HHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 332332 244333333 33479999999999874
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.6e-14 Score=124.10 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=95.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+|+
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999999999999999999999999999999998765443 23468899999999999888776 7999
Q ss_pred EEEcCc----------------h-H-------------HHHH----HHh------CCCCEEEEecccccccCCCCccccc
Q 024643 167 IICPSE----------------G-F-------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 167 vi~~~~----------------~-~-------------~~~a----a~~------~gv~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
+|++.+ . + +..+ +++ .+..+||++||...+.+......|.
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 164 (257)
T 3tpc_A 85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYA 164 (257)
T ss_dssp EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchH
Confidence 998711 0 0 0111 222 2567899999998876554333332
Q ss_pred chhHHHHHHHHH-------HHHHhCCCCEEEEeCCCcc
Q 024643 207 KGNARKLAEQDE-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~~~~k~~~E-------~~l~~~gl~~tivRPg~l~ 237 (265)
. .|...+ ..+...|+++++|+||++.
T Consensus 165 a-----sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 197 (257)
T 3tpc_A 165 A-----SKGGVAALTLPAARELARFGIRVVTIAPGIFD 197 (257)
T ss_dssp H-----HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBS
T ss_pred H-----HHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCC
Confidence 2 343333 3344579999999999874
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-14 Score=125.01 Aligned_cols=126 Identities=17% Similarity=0.094 Sum_probs=95.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCc----h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE----G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~----~ 173 (265)
|+|+||||+|+||++++++|+ +|++|++++|+.... .+ +.+|++|++++.+++++ +|+||++.+ .
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-----~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~ 71 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-----GG---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD 71 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-----TC---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-----CC---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence 579999999999999999999 589999999987431 22 78999999999999986 999998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCc----ccccch-hHHHHHHHHHHHHHhCCCCEEE
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----QALMKG-NARKLAEQDESMLMASGIPYTI 230 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----~~~~~~-~~~~~k~~~E~~l~~~gl~~ti 230 (265)
.+.+++.+.++ +||++||..+|...... .+..+. .+...|..+|.+++. +++++
T Consensus 72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~--~~~~~ 148 (273)
T 2ggs_A 72 KCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ--DDSLI 148 (273)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC--TTCEE
T ss_pred hhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC--CCeEE
Confidence 13344566676 99999999988643211 011112 233588889998877 89999
Q ss_pred EeCCCcc
Q 024643 231 IRTGVLQ 237 (265)
Q Consensus 231 vRPg~l~ 237 (265)
+||+.+.
T Consensus 149 iR~~~v~ 155 (273)
T 2ggs_A 149 IRTSGIF 155 (273)
T ss_dssp EEECCCB
T ss_pred Eeccccc
Confidence 9999876
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-14 Score=121.36 Aligned_cols=139 Identities=17% Similarity=0.102 Sum_probs=97.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHc---------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALR---------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~---------~~ 164 (265)
+++|+||||+|+||++++++|+++| ++|++++|+.++.+.+. +..+.++.+|++|.+++.++++ .+
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 5789999999999999999999999 99999999987655432 4478999999999999988776 89
Q ss_pred CEEEEcC---c--h---------H-------------HHH----HHHhC------C-----CCEEEEecccccccCCCCc
Q 024643 165 RSIICPS---E--G---------F-------------ISN----AGSLK------G-----VQHVILLSQLSVYRGSGGI 202 (265)
Q Consensus 165 d~vi~~~---~--~---------~-------------~~~----aa~~~------g-----v~r~V~iSS~~v~~~~~~~ 202 (265)
|++|++. . . + +.. .+++. + ..+||++||...+......
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~ 162 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS 162 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc
Confidence 9999872 1 0 0 001 12223 4 6899999998776543111
Q ss_pred cc--ccchhHHHHHHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 203 QA--LMKGNARKLAEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 203 ~~--~~~~~~~~~k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
.. .....+...|...+.+.+ ..|+++++|+||++.
T Consensus 163 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 206 (250)
T 1yo6_A 163 GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQ 206 (250)
T ss_dssp TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-
T ss_pred ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCcee
Confidence 00 001112235555554432 358999999999874
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-14 Score=126.36 Aligned_cols=137 Identities=13% Similarity=0.074 Sum_probs=98.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh-------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES-------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+. +..+.. .+..+.++.+|++|++++.++++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 45578999999999999999999999999999999943 332221 24578899999999999888775
Q ss_pred --CCCEEEEcCc-----h--------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 --GVRSIICPSE-----G--------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 --~~d~vi~~~~-----~--------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
++|++|++.+ . + +. ..+++.+.++||++||...+...+....|..
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a--- 178 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVA--- 178 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH---
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHH---
Confidence 7899998711 0 0 11 1145567789999999887765443323322
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 179 --sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 210 (281)
T 3v2h_A 179 --AKHGIMGLTKTVALEVAESGVTVNSICPGYVL 210 (281)
T ss_dssp --HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred --HHHHHHHHHHHHHHHhhhcCcEEEEEECCCCc
Confidence 34333333 34579999999999864
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.4e-14 Score=127.28 Aligned_cols=137 Identities=16% Similarity=0.176 Sum_probs=100.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 45678999999999999999999999999999999988665432 24578899999999999988776
Q ss_pred CCCEEEEcCc-----h--------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPSE-----G--------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+ . + + ...+++.+..+||++||.....+......|..
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~a----- 177 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTV----- 177 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHH-----
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHH-----
Confidence 6899998721 0 0 1 11244556789999999887655443333322
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|++++.|+||++.
T Consensus 178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 209 (271)
T 4ibo_A 178 AKGGIKMLTRAMAAEWAQYGIQANAIGPGYML 209 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEeccEe
Confidence 3333333 334579999999999874
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.8e-14 Score=126.99 Aligned_cols=136 Identities=14% Similarity=0.178 Sum_probs=97.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 44578999999999999999999999999999999998665432 24578899999999999887765
Q ss_pred CCCEEEEcCc-----h--------H-------------HHHH------HHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 GVRSIICPSE-----G--------F-------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~~a------a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ . + +..+ +++.+..+||++||...+........|.
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~---- 176 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYT---- 176 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHH----
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHH----
Confidence 6899998721 0 0 1111 3345678999999998876544332332
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l 236 (265)
..|...+.+ +...|+++++|+||++
T Consensus 177 -asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v 208 (279)
T 3sju_A 177 -ASKHGVVGFTKSVGFELAKTGITVNAVCPGYV 208 (279)
T ss_dssp -HHHHHHHHHHHHHHHHTGGGTEEEEEEEESSB
T ss_pred -HHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcc
Confidence 244333333 3347899999999987
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-14 Score=126.05 Aligned_cols=137 Identities=14% Similarity=0.085 Sum_probs=95.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhhc-------CCccEEeeeCCCCH----HHHHHHHc--
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMESF-------GTYVESMAGDASNK----KFLKTALR-- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~~-------~~~v~~i~~D~~d~----~~l~~~~~-- 162 (265)
..+++++||||+|+||++++++|+++|++|++++| +.++.++.. +..+.++.+|++|. +++.++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 35689999999999999999999999999999999 765543321 55788999999999 88887765
Q ss_pred -----CCCEEEEcCc-----------------------hH--------------HHHHHHh---CCC------CEEEEec
Q 024643 163 -----GVRSIICPSE-----------------------GF--------------ISNAGSL---KGV------QHVILLS 191 (265)
Q Consensus 163 -----~~d~vi~~~~-----------------------~~--------------~~~aa~~---~gv------~r~V~iS 191 (265)
++|++|++.+ .. +..++.. .+. ++||++|
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is 168 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC 168 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence 7899998721 10 1111211 344 7999999
Q ss_pred ccccccCCCCcccccchhHHHHHHHHHH-------HHHhCCCCEEEEeCCCccC
Q 024643 192 QLSVYRGSGGIQALMKGNARKLAEQDES-------MLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 192 S~~v~~~~~~~~~~~~~~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~~ 238 (265)
|..++.+.+....|.. .|...+. .+...|+++++|+||++..
T Consensus 169 S~~~~~~~~~~~~Y~a-----sK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t 217 (276)
T 1mxh_A 169 DAMTDLPLPGFCVYTM-----AKHALGGLTRAAALELAPRHIRVNAVAPGLSLL 217 (276)
T ss_dssp CGGGGSCCTTCHHHHH-----HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSC
T ss_pred chhhcCCCCCCeehHH-----HHHHHHHHHHHHHHHHhhcCeEEEEEecCcccC
Confidence 9988765433323322 3433333 3344699999999998743
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.7e-14 Score=126.92 Aligned_cols=137 Identities=17% Similarity=0.193 Sum_probs=99.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCC---ccEEeeeCCCCHHHHHHHHc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT---YVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~---~v~~i~~D~~d~~~l~~~~~---- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+. .+.++.+|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999998654432 112 68899999999999887765
Q ss_pred ---CCCEEEEcCch------H---------------------H----HHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 ---GVRSIICPSEG------F---------------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~~------~---------------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+. + + ...+.+.+..+||++||...+........|..
T Consensus 88 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a- 166 (281)
T 3svt_A 88 WHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGV- 166 (281)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHH-
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHH-
Confidence 67999987210 0 0 11134456679999999988765443333322
Q ss_pred hHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 167 ----sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 198 (281)
T 3svt_A 167 ----TKSAVDHLMQLAADELGASWVRVNSIRPGLIR 198 (281)
T ss_dssp ----HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred ----HHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCc
Confidence 44444333 34578999999999873
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.1e-14 Score=122.98 Aligned_cols=139 Identities=17% Similarity=0.113 Sum_probs=90.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34578999999999999999999999999999999998665433 24578899999999999888775
Q ss_pred CCCEEEEcCch----------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchh
Q 024643 163 GVRSIICPSEG----------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 ~~d~vi~~~~~----------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|++|++.+. + +...+++.+..+||++||..++... ..|..++
T Consensus 86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~Y~asK 162 (253)
T 3qiv_A 86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAWLYS---NYYGLAK 162 (253)
T ss_dssp CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCH
T ss_pred CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCccccCCC---chhHHHH
Confidence 78999987210 0 1112445667899999999876322 1233322
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.. ...+.....+...|+++++|+||++.
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 192 (253)
T 3qiv_A 163 VGINGLTQQLSRELGGRNIRINAIAPGPID 192 (253)
T ss_dssp HHHHHHHHHHHHHTTTTTEEEEEEEC----
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEecCCc
Confidence 21 11112222233468999999999874
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-14 Score=126.13 Aligned_cols=142 Identities=11% Similarity=0.146 Sum_probs=100.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+..+.+|++|.+++.++++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 45678999999999999999999999999999999988655432 24578899999999999887775
Q ss_pred CCCEEEEcCc----h---------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 GVRSIICPSE----G---------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 ~~d~vi~~~~----~---------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
.+|++|++.+ . + +. ..+.+.+..+||++||...+...+....|..++..
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 184 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGV 184 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHH
Confidence 7899998721 0 0 11 11344566799999998877654433333222211
Q ss_pred -HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 -KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 -~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|+++++|+||++.
T Consensus 185 ~~l~~~la~e~~~~gI~vn~v~PG~v~ 211 (270)
T 3ftp_A 185 AGMTRALAREIGSRGITVNCVAPGFID 211 (270)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence 11122223344579999999999873
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.57 E-value=2.1e-14 Score=125.51 Aligned_cols=142 Identities=17% Similarity=0.148 Sum_probs=99.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999997654432 35678999999999988877665
Q ss_pred -CCCEEEEcCc-----h--------H-------------H----HHHHHhCC-CCEEEEecccccccCCCCcccccchhH
Q 024643 163 -GVRSIICPSE-----G--------F-------------I----SNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~----~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ . + + ...+.+.+ ..+||++||...+.+.+....|...+.
T Consensus 97 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 176 (266)
T 4egf_A 97 GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKA 176 (266)
T ss_dssp TSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHH
Confidence 7899997611 0 0 0 11133333 469999999988765443333322221
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 R--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ...+.....+...|++++.|+||++.
T Consensus 177 a~~~l~~~la~e~~~~gI~vn~v~PG~v~ 205 (266)
T 4egf_A 177 GLVMATKVLARELGPHGIRANSVCPTVVL 205 (266)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCBC
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEEeCCCc
Confidence 1 11122223344579999999999873
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-14 Score=122.77 Aligned_cols=136 Identities=13% Similarity=0.133 Sum_probs=99.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999998665432 24578999999999999888775 4
Q ss_pred CCEEEEcCc-----h--------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----G--------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ . + +. ..+.+.+..+||++||...+.+.+....|.. .
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-----s 157 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCA-----A 157 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHH-----H
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHH-----H
Confidence 799998721 0 0 11 1134456679999999887665443333322 3
Q ss_pred HHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
|...+. .+...|+++++|+||++.
T Consensus 158 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 188 (247)
T 3lyl_A 158 KAGVIGFSKSLAYEVASRNITVNVVAPGFIA 188 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHHcCeEEEEEeeCcEe
Confidence 333332 334579999999999874
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.4e-14 Score=124.61 Aligned_cols=136 Identities=18% Similarity=0.237 Sum_probs=96.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++|+||||+|+||++++++|+++|++|++++| +.++.+.. .+..+.++.+|++|++++.++++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 345789999999999999999999999999999999 55443322 24568899999999999988876
Q ss_pred -CCCEEEEcCc--------h-----H-------------HHHHHHh---CCCCEEEEecccccc-cCCCCcccccchhHH
Q 024643 163 -GVRSIICPSE--------G-----F-------------ISNAGSL---KGVQHVILLSQLSVY-RGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~--------~-----~-------------~~~aa~~---~gv~r~V~iSS~~v~-~~~~~~~~~~~~~~~ 211 (265)
++|++|++.+ . + +..++.. .+ ++||++||..++ ........| .
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~Y-----~ 171 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTGIPNHALY-----A 171 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCSCCSCHHH-----H
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCCCCCCchH-----H
Confidence 7899997621 0 0 1111111 24 799999998876 433222222 2
Q ss_pred HHHHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
..|...|.+.+ ..+++++++|||++.
T Consensus 172 ~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~ 204 (274)
T 1ja9_A 172 GSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVK 204 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 35555554433 369999999999863
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=2.2e-14 Score=123.82 Aligned_cols=135 Identities=14% Similarity=0.150 Sum_probs=97.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
++++++||||+|+||++++++|+++|++|++++|+. ++.+.. .+..+.++++|++|.+++.++++ .
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999999999999988854 332221 24568899999999999888775 7
Q ss_pred CCEEEEcCc-----h--------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----G--------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ . + +..+ +++.+.++||++||...+.+.++...|.. .
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-----s 157 (246)
T 3osu_A 83 LDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVA-----T 157 (246)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH-----H
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHH-----H
Confidence 899998711 0 0 1111 35567789999999887655443333322 3
Q ss_pred HHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
|...+. .+...|+++++|+||++.
T Consensus 158 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 188 (246)
T 3osu_A 158 KAGVIGLTKSAARELASRGITVNAVAPGFIV 188 (246)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBG
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEECCCc
Confidence 433333 334579999999999874
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.57 E-value=3.2e-14 Score=124.61 Aligned_cols=135 Identities=11% Similarity=0.069 Sum_probs=98.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHcC-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALRG------- 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~------- 163 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|.+++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4578999999999999999999999999999999987654322 245688999999999998887754
Q ss_pred CCEEEEcC----c------h----------------------HHHHHHHhCCCCEEEEecccccccC--CCCcccccchh
Q 024643 164 VRSIICPS----E------G----------------------FISNAGSLKGVQHVILLSQLSVYRG--SGGIQALMKGN 209 (265)
Q Consensus 164 ~d~vi~~~----~------~----------------------~~~~aa~~~gv~r~V~iSS~~v~~~--~~~~~~~~~~~ 209 (265)
+|++|++. . . .+...+++.+.++||++||..++.. ..+...
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~----- 186 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAP----- 186 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHH-----
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCccc-----
Confidence 89999871 1 1 0112245567889999999887644 221111
Q ss_pred HHHHHHHHHHHHH-------hCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESMLM-------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~l~-------~~gl~~tivRPg~l~ 237 (265)
+...|...|.+.+ ..+ ++++|+||++.
T Consensus 187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~ 220 (279)
T 3ctm_A 187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYID 220 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBS
T ss_pred HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCc
Confidence 2235555555443 257 99999999874
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=8e-14 Score=122.74 Aligned_cols=137 Identities=12% Similarity=0.116 Sum_probs=96.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhh----h--cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AME----S--FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~----~--~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++ .+. + .+..+.++.+|++|.+++.++++
T Consensus 26 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 26 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 105 (283)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3457899999999999999999999999999999998753 221 1 24568899999999998877654
Q ss_pred -CCCEEEEcCc-----h--------H-------------HHHHHHh--CCCCEEEEecccccccCCCC-cccccchhHHH
Q 024643 163 -GVRSIICPSE-----G--------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGG-IQALMKGNARK 212 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~-~~~~~~~~~~~ 212 (265)
++|++|++.+ . + +..++.. .+.++||++||...+....+ ...|. .
T Consensus 106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~-----a 180 (283)
T 1g0o_A 106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYS-----G 180 (283)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHH-----H
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchH-----H
Confidence 6899998721 0 0 1122222 25679999999877654322 22222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 181 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 212 (283)
T 1g0o_A 181 SKGAIETFARCMAIDMADKKITVNVVAPGGIK 212 (283)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 44433333 34579999999999863
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=3.4e-14 Score=124.60 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=98.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+. +..+.. .+..+.++.+|++|.+++.++++
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999843 332221 24578899999999999887775
Q ss_pred -CCCEEEEcCc------------h-H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSE------------G-F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~------------~-~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + + ...+++.+..+||++||...+........|..
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a---- 180 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSA---- 180 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHH----
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHH----
Confidence 7899998721 0 0 1 11134566789999999887655443323322
Q ss_pred HHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 181 -sK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~ 212 (269)
T 4dmm_A 181 -AKAGVIGLTKTVAKELASRGITVNAVAPGFIA 212 (269)
T ss_dssp -HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBT
T ss_pred -HHHHHHHHHHHHHHHHhhhCcEEEEEEECCCc
Confidence 3333332 334579999999999874
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=1.8e-14 Score=125.60 Aligned_cols=135 Identities=16% Similarity=0.210 Sum_probs=97.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+|+||++++++|+++|++|+++ .|+.++.++. .+..+.++.+|++|++++.++++ .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999987 7776544332 24578899999999999887775 5
Q ss_pred CCEEEEcCc-----h------------H-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----G------------F-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~------------~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ . + +...+++.+..+||++||...+........|. ..
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-----as 157 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVG-----VS 157 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHH-----HH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHH-----HH
Confidence 699998721 0 0 11124566778999999988775544332222 24
Q ss_pred HHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
|...+.+ +...|+++++|+||++.
T Consensus 158 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 188 (258)
T 3oid_A 158 KAALEALTRYLAVELSPKQIIVNAVSGGAID 188 (258)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence 4444433 33468999999999873
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=6.3e-14 Score=123.25 Aligned_cols=142 Identities=13% Similarity=0.078 Sum_probs=97.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-------------Ccchhhh------cCCccEEeeeCCCCHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAMES------FGTYVESMAGDASNKKF 156 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-------------~~~~~~~------~~~~v~~i~~D~~d~~~ 156 (265)
...+++++||||+|+||++++++|+++|++|++++|+ .++.++. .+..+.++++|++|+++
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4567899999999999999999999999999999983 3322221 24578899999999999
Q ss_pred HHHHHc-------CCCEEEEcCc-----h--------H-------------HH----HHHHhCC-CCEEEEecccccccC
Q 024643 157 LKTALR-------GVRSIICPSE-----G--------F-------------IS----NAGSLKG-VQHVILLSQLSVYRG 198 (265)
Q Consensus 157 l~~~~~-------~~d~vi~~~~-----~--------~-------------~~----~aa~~~g-v~r~V~iSS~~v~~~ 198 (265)
+.++++ .+|++|++.+ . + +. ..+++.+ ..+||++||...+..
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 171 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKA 171 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccC
Confidence 888775 7899998711 0 0 11 1133443 579999999888765
Q ss_pred CCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 199 ~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+....|..++.. ...+.....+...|+++++|+||++.
T Consensus 172 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 212 (280)
T 3pgx_A 172 TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVE 212 (280)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 5433333222211 11122223344579999999999874
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-14 Score=123.37 Aligned_cols=143 Identities=14% Similarity=0.167 Sum_probs=96.9
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE-eCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
...++++|+||||+|+||++++++|+++|++|++++ |+..+.... .+..+.++.+|++|.+++.++++
T Consensus 9 ~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 445678999999999999999999999999999988 444433221 24578899999999999888775
Q ss_pred --CCCEEEEcCc------------h-H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 --GVRSIICPSE------------G-F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 --~~d~vi~~~~------------~-~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ . + +...+++.+..+||++||...+.+..+...|..++.
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~ 168 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA 168 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHH
Confidence 6799998711 0 0 111245567789999999888765544333322221
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 R--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ...+.....+...|+++++|+||++.
T Consensus 169 a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 197 (256)
T 3ezl_A 169 GIHGFTMSLAQEVATKGVTVNTVSPGYIG 197 (256)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhCCEEEEEEECccc
Confidence 1 11112222334578999999999873
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.57 E-value=4.4e-14 Score=124.86 Aligned_cols=136 Identities=16% Similarity=0.244 Sum_probs=97.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++ .
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4568999999999999999999999999999999998665432 23568899999999998887775 7
Q ss_pred CCEEEEcCc-----h-------------H---------HH----HHHHhCCCCEEEEeccccccc--CCCCcccccchhH
Q 024643 164 VRSIICPSE-----G-------------F---------IS----NAGSLKGVQHVILLSQLSVYR--GSGGIQALMKGNA 210 (265)
Q Consensus 164 ~d~vi~~~~-----~-------------~---------~~----~aa~~~gv~r~V~iSS~~v~~--~~~~~~~~~~~~~ 210 (265)
+|++|++.+ . + +. ..+++.+.++||++||...+. ..++...|.
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~---- 181 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT---- 181 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHH----
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHH----
Confidence 899998711 0 0 11 113556778999999987754 222222222
Q ss_pred HHHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
..|...+.+. ...|+++++|+||++.
T Consensus 182 -asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 214 (283)
T 3v8b_A 182 -ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIE 214 (283)
T ss_dssp -HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBS
T ss_pred -HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCc
Confidence 2444444333 3478999999999874
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=125.30 Aligned_cols=137 Identities=11% Similarity=0.055 Sum_probs=98.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+|
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 34578999999999999999999999999999999998765443 34678999999999999988775 799
Q ss_pred EEEEcCc------hH-------------------------HHHHHHhCC--CCEEEEecccccccCCCCcccccchhHHH
Q 024643 166 SIICPSE------GF-------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 166 ~vi~~~~------~~-------------------------~~~aa~~~g--v~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
++|++.+ .+ +...+++.+ ..+||++||...+.+......|..
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a----- 179 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTA----- 179 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHH-----
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHH-----
Confidence 9998711 00 111134443 469999999988765443333322
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 211 (272)
T 4dyv_A 180 TKHAITGLTKSTSLDGRVHDIACGQIDIGNAD 211 (272)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCccCEEEEEEEECccc
Confidence 3333333 344579999999999863
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.4e-14 Score=123.91 Aligned_cols=135 Identities=15% Similarity=0.213 Sum_probs=97.5
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
.....+++|+||||+|+||++++++|+++|++|++++|+.+... ..+..+++|++|.+++.++++ .+|+
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 34556899999999999999999999999999999999876542 357889999999999887775 7899
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|++.+ . + +...+++.+.++||++||..++........|. ..|..
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asKaa 159 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYV-----TSKHA 159 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHH-----HHHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHH-----HHHHH
Confidence 998721 0 0 11114456778999999998876544332222 24444
Q ss_pred HHHHHHh------CCCCEEEEeCCCcc
Q 024643 217 DESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.+.+.+. .++++++|+||++.
T Consensus 160 ~~~l~~~la~e~~~~i~vn~v~PG~v~ 186 (269)
T 3vtz_A 160 LLGLTRSVAIDYAPKIRCNAVCPGTIM 186 (269)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhcCCCEEEEEEECCCc
Confidence 4443321 38999999999873
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.4e-14 Score=124.33 Aligned_cols=136 Identities=15% Similarity=0.172 Sum_probs=96.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc------CCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~------~~d~vi~~ 170 (265)
..+++++||||+|+||++++++|+++|++|++++|+.+...+..+..+.++++|++|++++.++++ .+|++|++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~n 86 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVNC 86 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEEC
Confidence 457899999999999999999999999999999997766555556789999999999999988776 78999987
Q ss_pred Cch-----H-------------------------HHH----HHHh--------CCCCEEEEecccccccCCCCcccccch
Q 024643 171 SEG-----F-------------------------ISN----AGSL--------KGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 171 ~~~-----~-------------------------~~~----aa~~--------~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+. + +.. .+++ .+..+||++||...+........|.
T Consensus 87 Ag~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-- 164 (257)
T 3tl3_A 87 AGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYS-- 164 (257)
T ss_dssp GGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHH--
T ss_pred CCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHH--
Confidence 210 0 000 1222 3456999999988765433222222
Q ss_pred hHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|++++.|+||++.
T Consensus 165 ---asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 197 (257)
T 3tl3_A 165 ---ASKGGVVGMTLPIARDLASHRIRVMTIAPGLFD 197 (257)
T ss_dssp ---HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred ---HHHHHHHHHHHHHHHHhcccCcEEEEEEecCcc
Confidence 23433333 344579999999999874
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.7e-14 Score=125.42 Aligned_cols=143 Identities=16% Similarity=0.164 Sum_probs=101.2
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc---CCCEEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---GVRSII 168 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi 168 (265)
....+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..++++.+|++|.+++.++++ .+|++|
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv 91 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLI 91 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 345678999999999999999999999999999999998766544 24578999999999999999887 569999
Q ss_pred EcCch------------------------HHHHHHHhCCCCEEEEecccccccCCCCc-------ccccchhHH-HHHHH
Q 024643 169 CPSEG------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-------QALMKGNAR-KLAEQ 216 (265)
Q Consensus 169 ~~~~~------------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-------~~~~~~~~~-~~k~~ 216 (265)
++.+. .+..++.....+|||++||...+...... .++.+...| ..|..
T Consensus 92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a 171 (291)
T 3rd5_A 92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLA 171 (291)
T ss_dssp ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHH
T ss_pred ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHH
Confidence 87210 02233444445699999998876432111 111112223 35544
Q ss_pred HHHHH-------HhCC--CCEEEEeCCCcc
Q 024643 217 DESML-------MASG--IPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l-------~~~g--l~~tivRPg~l~ 237 (265)
.+.+. ...| ++++.|+||++.
T Consensus 172 ~~~~~~~la~e~~~~g~~i~v~~v~PG~v~ 201 (291)
T 3rd5_A 172 NLLFTSELQRRLTAAGSPLRALAAHPGYSH 201 (291)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEECCSGGG
T ss_pred HHHHHHHHHHHHhhCCCCEEEEEeeCCCCc
Confidence 44332 3355 999999999874
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.56 E-value=5e-14 Score=123.68 Aligned_cols=139 Identities=12% Similarity=0.134 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-------h------cCCccEEeeeCCCCHHHHHHHHc-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------S------FGTYVESMAGDASNKKFLKTALR- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-------~------~~~~v~~i~~D~~d~~~l~~~~~- 162 (265)
..+++++||||+++||++++++|+++|++|++++|+.++.+. . .+..+.++.+|++|++++.++++
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 83 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA 83 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999998754211 1 24578899999999999887764
Q ss_pred ------CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCC--CCccc
Q 024643 163 ------GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGS--GGIQA 204 (265)
Q Consensus 163 ------~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~--~~~~~ 204 (265)
.+|++|++.+ . + +...+++.+..+||++||...+... .....
T Consensus 84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~ 163 (274)
T 3e03_A 84 TVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTG 163 (274)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHH
T ss_pred HHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCch
Confidence 6899998721 0 0 1111445667899999998765431 11111
Q ss_pred ccchhHHHHHHHHH-------HHHHhCCCCEEEEeCCCccCCC
Q 024643 205 LMKGNARKLAEQDE-------SMLMASGIPYTIIRTGVLQNTP 240 (265)
Q Consensus 205 ~~~~~~~~~k~~~E-------~~l~~~gl~~tivRPg~l~~~~ 240 (265)
|. ..|...+ ..+...|++++.|+||++.+.+
T Consensus 164 Y~-----asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~ 201 (274)
T 3e03_A 164 YT-----LAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD 201 (274)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-
T ss_pred HH-----HHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc
Confidence 21 2443333 3344579999999999644433
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.7e-14 Score=123.83 Aligned_cols=137 Identities=15% Similarity=0.163 Sum_probs=97.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-hcCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-SFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++..+ +...++.++.+|++|++++.++++ .+|++
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4557889999999999999999999999999999999865432 222358899999999999887775 68999
Q ss_pred EEcCc-----------h-H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 168 ICPSE-----------G-F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 168 i~~~~-----------~-~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
|++.+ . + +...+++.+..+||++||...+.+......|. ..|...+
T Consensus 104 v~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asKaa~~ 178 (260)
T 3gem_A 104 VHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYC-----ATKAGLE 178 (260)
T ss_dssp EECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHH-----HHHHHHH
T ss_pred EECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHH-----HHHHHHH
Confidence 98721 0 0 11114556778999999998876544332332 2444433
Q ss_pred HHHHh------CCCCEEEEeCCCcc
Q 024643 219 SMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l~~------~gl~~tivRPg~l~ 237 (265)
.+.+. .++++++|+||++.
T Consensus 179 ~l~~~la~e~~~~Irvn~v~PG~v~ 203 (260)
T 3gem_A 179 SLTLSFAARFAPLVKVNGIAPALLM 203 (260)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECTTC
T ss_pred HHHHHHHHHHCCCCEEEEEeecccc
Confidence 33221 36999999999874
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.5e-14 Score=125.39 Aligned_cols=136 Identities=16% Similarity=0.172 Sum_probs=98.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999998665433 24578899999999999887775 7
Q ss_pred CCEEEEcCc---h-----------H-----------------HHHHHHhCCCCEEEEecccccc-cCCCCcccccchhHH
Q 024643 164 VRSIICPSE---G-----------F-----------------ISNAGSLKGVQHVILLSQLSVY-RGSGGIQALMKGNAR 211 (265)
Q Consensus 164 ~d~vi~~~~---~-----------~-----------------~~~aa~~~gv~r~V~iSS~~v~-~~~~~~~~~~~~~~~ 211 (265)
+|++|++.+ . + ....+++.+..+||++||..++ ...+....|.
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~----- 160 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYA----- 160 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHH-----
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHH-----
Confidence 899998721 0 0 1111445667899999998776 3322222222
Q ss_pred HHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 161 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~ 193 (280)
T 3tox_A 161 ASKAGLIGLVQALAVELGARGIRVNALLPGGTD 193 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCC
Confidence 23433333 334579999999999874
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.2e-14 Score=123.93 Aligned_cols=135 Identities=10% Similarity=0.104 Sum_probs=97.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ .+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999998665433 24568889999999999887764 78
Q ss_pred CEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+ . + +...+++.+.++||++||..++........|.. .|
T Consensus 83 D~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a-----sK 157 (264)
T 3tfo_A 83 DVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCA-----TK 157 (264)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHH-----HH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHH-----HH
Confidence 99998721 0 0 111244566789999999988765443323322 34
Q ss_pred HHHHHHHH----h-CCCCEEEEeCCCcc
Q 024643 215 EQDESMLM----A-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~----~-~gl~~tivRPg~l~ 237 (265)
...+.+.+ + .|++++.|+||++.
T Consensus 158 aal~~l~~~la~e~~gIrvn~v~PG~v~ 185 (264)
T 3tfo_A 158 FAVRAISDGLRQESTNIRVTCVNPGVVE 185 (264)
T ss_dssp HHHHHHHHHHHHHCSSEEEEEEEECCC-
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCCc
Confidence 33333221 1 38999999999864
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.56 E-value=3e-14 Score=124.63 Aligned_cols=138 Identities=13% Similarity=0.133 Sum_probs=96.4
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
....+++++||||+|+||++++++|+++|++|++++|+. +..+.. .+..+.++.+|++|.+++.++++
T Consensus 21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLAD 100 (269)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 345678899999999999999999999999999998544 322211 24578999999999999887775
Q ss_pred --CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 163 --GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 --~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ . + +...+++.+..+||++||...+........|..
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a--- 177 (269)
T 3gk3_A 101 FGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYAS--- 177 (269)
T ss_dssp HSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHH---
T ss_pred cCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHH---
Confidence 7899998721 0 0 111134466789999999887665443333322
Q ss_pred HHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 178 --sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 209 (269)
T 3gk3_A 178 --AKAGIHGFTKTLALETAKRGITVNTVSPGYLA 209 (269)
T ss_dssp --HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred --HHHHHHHHHHHHHHHhhhcCCEEEEEecCccc
Confidence 3333332 334479999999999874
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.56 E-value=7.4e-14 Score=122.77 Aligned_cols=137 Identities=14% Similarity=0.164 Sum_probs=98.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh---hh--cCCccEEeeeCCCCHHHHHHHHc------CC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR------GV 164 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~--~~~~v~~i~~D~~d~~~l~~~~~------~~ 164 (265)
...+++++||||+|+||++++++|+++|++|++++|+....+ ++ .+..+.++.+|++|.+++.++.+ .+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 456789999999999999999999999999999997653211 11 24568899999999998876653 78
Q ss_pred CEEEEcCc-----h--------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSE-----G--------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~-----~--------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+ . + +. ..+++.+.++||++||..++.+......|.. .|
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a-----sK 182 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAA-----SK 182 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHH-----HH
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHH-----HH
Confidence 99998711 0 0 11 1144567789999999988765543333322 33
Q ss_pred HHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 215 EQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
...+. .+...|+++++|+||++.
T Consensus 183 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 212 (273)
T 3uf0_A 183 HAVVGLTRALASEWAGRGVGVNALAPGYVV 212 (273)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEeCCCc
Confidence 33333 334579999999999873
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=6e-14 Score=123.03 Aligned_cols=135 Identities=17% Similarity=0.148 Sum_probs=95.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+... ...+.++.+|++|++++.++++ .+|++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 45789999999999999999999999999999999876654331 2347889999999999887775 68999
Q ss_pred EEcCc-----h---------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 168 ICPSE-----G---------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 168 i~~~~-----~---------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
|++.+ . + +..+ +++. .++||++||.......+....|. ..|..
T Consensus 87 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~-----asKaa 160 (270)
T 1yde_A 87 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYV-----ATKGA 160 (270)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHH-----HHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccH-----HHHHH
Confidence 98711 0 0 1111 2222 47999999987654433222222 23433
Q ss_pred HHHH-------HHhCCCCEEEEeCCCcc
Q 024643 217 DESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+.+ +...|+++++|+||++.
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~Pg~v~ 188 (270)
T 1yde_A 161 VTAMTKALALDESPYGVRVNCISPGNIW 188 (270)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhhCcEEEEEEeCccc
Confidence 3333 34579999999999863
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.2e-14 Score=121.10 Aligned_cols=134 Identities=12% Similarity=0.120 Sum_probs=96.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc--------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR--------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~--------~ 163 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ .
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999987654432 14568899999999998876653 4
Q ss_pred CCEEEEcCc-hH------------------------------------HHHHHHhCCCCEEEEecccccccCCCCccccc
Q 024643 164 VRSIICPSE-GF------------------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 164 ~d~vi~~~~-~~------------------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
+|++|++.+ +. ....+.+.+.++||++||...+.... ...|
T Consensus 84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~Y- 161 (260)
T 2qq5_A 84 LDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMF-NVPY- 161 (260)
T ss_dssp CCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCCS-SHHH-
T ss_pred ceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCCC-CCch-
Confidence 699998741 00 01113456678999999988764321 1122
Q ss_pred chhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 207 KGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...|...+.+ +...|+++++|+||++.
T Consensus 162 ----~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (260)
T 2qq5_A 162 ----GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQ 195 (260)
T ss_dssp ----HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSC
T ss_pred ----HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccc
Confidence 2244444433 34579999999999874
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-14 Score=127.52 Aligned_cols=141 Identities=14% Similarity=0.138 Sum_probs=97.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCC--ccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGT--YVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~--~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+. .+.++.+|++|.+++.++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 3568999999999999999999999999999999998765432 122 68899999999999888775
Q ss_pred -CCCEEEEcCc-----h--------H-------------H----HHHHHhC------CCCEEEEecccccccCCCCcccc
Q 024643 163 -GVRSIICPSE-----G--------F-------------I----SNAGSLK------GVQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~----~~aa~~~------gv~r~V~iSS~~v~~~~~~~~~~ 205 (265)
.+|++|++.+ . + + ...+.+. +.++||++||..++...+....|
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y 165 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY 165 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHH
Confidence 5699998721 0 0 0 1112222 46799999999887655433333
Q ss_pred cchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 206 MKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..++.. .........+...|+++++|+||++.
T Consensus 166 ~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~ 199 (319)
T 3ioy_A 166 NTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVK 199 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEc
Confidence 222211 01111222244579999999999874
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.56 E-value=8.5e-15 Score=122.28 Aligned_cols=130 Identities=12% Similarity=0.136 Sum_probs=94.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHHHc---CCCEEEEcCc--
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALR---GVRSIICPSE-- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~-- 172 (265)
|+++||||+|+||++++++|+++ +|++++|+.++.+.... .. +++.+|++|++++.++++ ++|.+|++.+
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~ 77 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA 77 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence 57999999999999999999998 99999998766543311 12 889999999999999988 8999998721
Q ss_pred -----------hH-------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHH-------
Q 024643 173 -----------GF-------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML------- 221 (265)
Q Consensus 173 -----------~~-------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l------- 221 (265)
.+ +.+++++.+.++||++||..++.+..+...|. ..|...|.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~-----~sK~a~~~~~~~~~~~~ 152 (207)
T 2yut_A 78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYA-----AAKGALEAYLEAARKEL 152 (207)
T ss_dssp CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHH-----HHHHHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHH-----HHHHHHHHHHHHHHHHH
Confidence 00 11223345667999999998876544332222 2444444433
Q ss_pred HhCCCCEEEEeCCCcc
Q 024643 222 MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~~~gl~~tivRPg~l~ 237 (265)
...|++++++|||++.
T Consensus 153 ~~~gi~v~~v~pg~v~ 168 (207)
T 2yut_A 153 LREGVHLVLVRLPAVA 168 (207)
T ss_dssp HTTTCEEEEECCCCBC
T ss_pred hhhCCEEEEEecCccc
Confidence 3379999999999874
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.56 E-value=9.1e-14 Score=120.59 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=104.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc---CCCEEEEcCc--
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSE-- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~-- 172 (265)
.+|+++||||+++||+++++.|+++|++|++.+|+.++++......+..+++|++|+++++++++ .+|++|++.+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS 89 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 58999999999999999999999999999999999988776667789999999999999887764 6899997611
Q ss_pred -h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHHHHHHHhC
Q 024643 173 -G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMAS 224 (265)
Q Consensus 173 -~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~E~~l~~~ 224 (265)
. + ....+++.+ .+||++||.......+....|..++. ....+.+..++..+
T Consensus 90 ~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~ 168 (242)
T 4b79_A 90 RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAE 168 (242)
T ss_dssp CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 1 0 111244444 79999999987655443333332221 22334445556678
Q ss_pred CCCEEEEeCCCcc
Q 024643 225 GIPYTIIRTGVLQ 237 (265)
Q Consensus 225 gl~~tivRPg~l~ 237 (265)
|++++.|.||++.
T Consensus 169 gIrVNaV~PG~i~ 181 (242)
T 4b79_A 169 RIRVNAIAPGWID 181 (242)
T ss_dssp TEEEEEEEECSBC
T ss_pred CeEEEEEEeCCCC
Confidence 9999999999873
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.56 E-value=3.3e-14 Score=125.02 Aligned_cols=142 Identities=11% Similarity=0.061 Sum_probs=99.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++..+. .+..+.++++|++|++++.++++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45678999999999999999999999999999999997654322 35678999999999998887765
Q ss_pred -CCCEEEEcCc-----h--------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSE-----G--------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + +..+ +.+.+..+||++||...+........|..++..
T Consensus 104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 183 (277)
T 4fc7_A 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAA 183 (277)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHH
T ss_pred CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHH
Confidence 7899998721 0 0 1111 233456799999998876554433233222210
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|++++.|+||++.
T Consensus 184 ~~~l~~~la~e~~~~gi~vn~v~PG~v~ 211 (277)
T 4fc7_A 184 VDAMTRHLAVEWGPQNIRVNSLAPGPIS 211 (277)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBS
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEECCEe
Confidence 11122223344579999999999874
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.56 E-value=4.8e-14 Score=120.32 Aligned_cols=132 Identities=8% Similarity=0.078 Sum_probs=95.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHcCC----CEEEEcCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGV----RSIICPSE 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~~----d~vi~~~~ 172 (265)
++|+||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|.+++.++++.+ |.+|++.+
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence 5799999999999999999999999999999998765543 3457889999999999999998765 78887621
Q ss_pred -----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH--
Q 024643 173 -----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM-- 220 (265)
Q Consensus 173 -----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~-- 220 (265)
. + +.. .+++.+. +||++||..++.+......|. ..|...+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~iv~isS~~~~~~~~~~~~Y~-----asKaa~~~~~~ 155 (230)
T 3guy_A 82 SGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPV-NVVMIMSTAAQQPKAQESTYC-----AVKWAVKGLIE 155 (230)
T ss_dssp CCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC-EEEEECCGGGTSCCTTCHHHH-----HHHHHHHHHHH
T ss_pred cCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEeecccCCCCCCCchhH-----HHHHHHHHHHH
Confidence 0 0 011 1233333 999999988876544332332 244333333
Q ss_pred -----HHhCCCCEEEEeCCCcc
Q 024643 221 -----LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 -----l~~~gl~~tivRPg~l~ 237 (265)
+...|++++.|+||++.
T Consensus 156 ~la~e~~~~gi~v~~v~PG~v~ 177 (230)
T 3guy_A 156 SVRLELKGKPMKIIAVYPGGMA 177 (230)
T ss_dssp HHHHHTTTSSCEEEEEEECCC-
T ss_pred HHHHHHHhcCeEEEEEECCccc
Confidence 33468999999999874
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=3.6e-14 Score=122.91 Aligned_cols=141 Identities=15% Similarity=0.243 Sum_probs=96.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh----h---cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S---FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~---~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++|+||||+|+||++++++|+++|++|++++|+..+... + .+..+.++.+|++|.+++.++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 346789999999999999999999999999999997654321 1 25578999999999999887765
Q ss_pred CCCEEEEcCc-----h--------H-------------HHHH----HHhCC-CCEEEEecccccccCCCC-cccccchhH
Q 024643 163 GVRSIICPSE-----G--------F-------------ISNA----GSLKG-VQHVILLSQLSVYRGSGG-IQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~~a----a~~~g-v~r~V~iSS~~v~~~~~~-~~~~~~~~~ 210 (265)
.+|++|++.+ . + +..+ +.+.+ .++||++||..++..... ..+..+...
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~ 171 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 171 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccc
Confidence 3788998721 0 0 1111 22333 479999999877543321 111111122
Q ss_pred H-HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 211 R-KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~-~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
| ..|...+.+. ...|+++++||||++.
T Consensus 172 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 206 (265)
T 1h5q_A 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVN 206 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 2 3555555443 3368999999999874
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.3e-14 Score=123.31 Aligned_cols=136 Identities=13% Similarity=0.121 Sum_probs=93.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------C-CccEEeeeCCCCHHHHHHHHc-----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------G-TYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~-~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.+... + ..+.++.+|++|.+++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999999986654321 2 568899999999998887764
Q ss_pred --CCCEEEEcCch------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 --GVRSIICPSEG------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 --~~d~vi~~~~~------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+. + +...+++.+..+||++||...+.+..+...|.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~----- 159 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYG----- 159 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHH-----
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchH-----
Confidence 68999987210 0 11113456678999999988765333222222
Q ss_pred HHHHHHH-------HHHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDE-------SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E-------~~l~~~gl~~tivRPg~l~ 237 (265)
..|...+ ..+...|++++.|+||++.
T Consensus 160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 192 (250)
T 3nyw_A 160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVN 192 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 2333333 3344579999999999863
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-14 Score=125.81 Aligned_cols=135 Identities=13% Similarity=0.157 Sum_probs=96.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-------------hcCCccEEeeeCCCCHHHHHHHHc-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTALR- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-------------~~~~~v~~i~~D~~d~~~l~~~~~- 162 (265)
..+++++||||+++||++++++|+++|++|++++|+.++.+. ..+..+.++++|++|++++.++++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999998763211 124578899999999999887775
Q ss_pred ------CCCEEEEcCc-----h--------H-------------HHHH----HHhCCCCEEEEecccccccCC-CCcccc
Q 024643 163 ------GVRSIICPSE-----G--------F-------------ISNA----GSLKGVQHVILLSQLSVYRGS-GGIQAL 205 (265)
Q Consensus 163 ------~~d~vi~~~~-----~--------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~-~~~~~~ 205 (265)
.+|++|++.+ . + +..+ +++.+..+||++||....... .....|
T Consensus 87 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y 166 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPY 166 (285)
T ss_dssp HHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchH
Confidence 7899998721 0 0 1111 333466799999998765442 222122
Q ss_pred cchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCc
Q 024643 206 MKGNARKLAEQDESM-------LMASGIPYTIIRTGVL 236 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l 236 (265)
. ..|...+.+ +...|++++.|+||++
T Consensus 167 ~-----asKaal~~~~~~la~e~~~~gI~vn~v~PG~~ 199 (285)
T 3sc4_A 167 M-----MAKYGMTLCALGIAEELRDAGIASNTLWPRTT 199 (285)
T ss_dssp H-----HHHHHHHHHHHHHHHHTGGGTCEEEEEECSSC
T ss_pred H-----HHHHHHHHHHHHHHHHhcccCcEEEEEeCCCc
Confidence 2 244443333 3447999999999964
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=6.9e-14 Score=121.49 Aligned_cols=142 Identities=10% Similarity=0.082 Sum_probs=96.9
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc---
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
.....+++|+||||+|+||++++++|+++| ++|++++|+.++.+.+ ....+.++.+|++|.+++.++++
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 95 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIE 95 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHH
Confidence 345567899999999999999999999999 9999999987654322 14578999999999998888776
Q ss_pred ------CCCEEEEcCc--h------------H-------------HHH----HHHhC------C-----CCEEEEecccc
Q 024643 163 ------GVRSIICPSE--G------------F-------------ISN----AGSLK------G-----VQHVILLSQLS 194 (265)
Q Consensus 163 ------~~d~vi~~~~--~------------~-------------~~~----aa~~~------g-----v~r~V~iSS~~ 194 (265)
.+|++|++.+ . + +.. .+.+. + ..+||++||..
T Consensus 96 ~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~ 175 (267)
T 1sny_A 96 GVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL 175 (267)
T ss_dssp HHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG
T ss_pred HhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccc
Confidence 7999998721 0 0 111 12222 2 57999999988
Q ss_pred cccCCCCcccccchhHHHHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 195 VYRGSGGIQALMKGNARKLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 195 v~~~~~~~~~~~~~~~~~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
++.......+.. .+...|...+.+. ...++++++||||++.
T Consensus 176 ~~~~~~~~~~~~--~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 223 (267)
T 1sny_A 176 GSIQGNTDGGMY--AYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 223 (267)
T ss_dssp GCSTTCCSCCCH--HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred ccccCCCCCCch--HHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCccee
Confidence 765432111111 1222444444433 3469999999999974
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=7.5e-14 Score=121.88 Aligned_cols=141 Identities=13% Similarity=0.127 Sum_probs=98.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------c-CCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------F-GTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~-~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
..+++++||||+++||++++++|+++|++|++++|+.++.+.. . ...+.++.+|++|.+++.++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999999999999999999998654432 1 2248899999999998887664
Q ss_pred -CCCEEEEcCc-----h--------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSE-----G--------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + + ...+++.+..+||++||...+.+.+....|..++..
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 165 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAG 165 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHH
Confidence 6899998721 0 0 0 111344567799999998887654433333222211
Q ss_pred --HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 212 --KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 --~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.....+...|++++.|+||++.
T Consensus 166 ~~~l~~~la~e~~~~gi~vn~v~PG~v~ 193 (265)
T 3lf2_A 166 VKNLVRSMAFEFAPKGVRVNGILIGLVE 193 (265)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeCcCc
Confidence 11122233344579999999999873
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.55 E-value=1.2e-13 Score=121.67 Aligned_cols=137 Identities=14% Similarity=0.179 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|++++.++++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45678999999999999999999999999999999998765443 24578899999999999988776
Q ss_pred CCCEEEEcCc-----h--------H-------------H----HHHHHhCC-CCEEEEecccccccCCC--Ccccccchh
Q 024643 163 GVRSIICPSE-----G--------F-------------I----SNAGSLKG-VQHVILLSQLSVYRGSG--GIQALMKGN 209 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~----~~aa~~~g-v~r~V~iSS~~v~~~~~--~~~~~~~~~ 209 (265)
.+|++|++.+ . + + ...+.+.+ ..+||++||...+.... ....|.
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~--- 185 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYC--- 185 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHH---
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHH---
Confidence 7899998711 0 0 0 11133344 37899999987754321 111222
Q ss_pred HHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|++++.|+||++.
T Consensus 186 --asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~ 218 (276)
T 3r1i_A 186 --TSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR 218 (276)
T ss_dssp --HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred --HHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCc
Confidence 244333333 34479999999999874
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.9e-14 Score=122.55 Aligned_cols=133 Identities=10% Similarity=0.120 Sum_probs=95.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+|++|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 57899999999999999999999999999999998765433 23368899999999999887765 679999
Q ss_pred EcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 169 CPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 169 ~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
++.+ . + +.. .+++.+ .+||++||...+.+.+....|. ..|...+
T Consensus 83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~-----asKaa~~ 156 (235)
T 3l6e_A 83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYC-----ASKWGMR 156 (235)
T ss_dssp EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHH-----HHHHHHH
T ss_pred ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHH-----HHHHHHH
Confidence 7611 0 0 001 122333 3999999988766544332222 2444333
Q ss_pred HH-------HHhCCCCEEEEeCCCcc
Q 024643 219 SM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+ +...|++++.|+||++.
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~ 182 (235)
T 3l6e_A 157 GFLESLRAELKDSPLRLVNLYPSGIR 182 (235)
T ss_dssp HHHHHHHHHTTTSSEEEEEEEEEEEC
T ss_pred HHHHHHHHHhhccCCEEEEEeCCCcc
Confidence 33 33478999999999863
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.5e-14 Score=119.27 Aligned_cols=121 Identities=14% Similarity=0.132 Sum_probs=88.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC---CCEEEEcCc---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG---VRSIICPSE--- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~---~d~vi~~~~--- 172 (265)
+|+|+||||+|+||++++++|+ +|++|++++|+.. .+.+|++|++++.+++++ +|++|++.+
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~ 70 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT 70 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 4689999999999999999999 9999999999864 467999999999988875 799998721
Q ss_pred --hH---------------------HHHHHHhC---CCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHh---
Q 024643 173 --GF---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMA--- 223 (265)
Q Consensus 173 --~~---------------------~~~aa~~~---gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~--- 223 (265)
.+ +..++... + ++||++||..++.+..+.. .+...|...|.+.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~-----~Y~~sK~~~~~~~~~~~~ 144 (202)
T 3d7l_A 71 FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDPIVQGA-----SAAMANGAVTAFAKSAAI 144 (202)
T ss_dssp CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSCCTTCH-----HHHHHHHHHHHHHHHHTT
T ss_pred CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCCCCccH-----HHHHHHHHHHHHHHHHHH
Confidence 00 11111111 3 6999999987765433221 122366666666543
Q ss_pred ---CCCCEEEEeCCCcc
Q 024643 224 ---SGIPYTIIRTGVLQ 237 (265)
Q Consensus 224 ---~gl~~tivRPg~l~ 237 (265)
.+++++++|||++.
T Consensus 145 e~~~gi~v~~v~pg~v~ 161 (202)
T 3d7l_A 145 EMPRGIRINTVSPNVLE 161 (202)
T ss_dssp SCSTTCEEEEEEECCBG
T ss_pred HccCCeEEEEEecCccC
Confidence 48999999999864
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.55 E-value=6.3e-14 Score=123.36 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=99.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------~ 163 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|.+++.++++ .
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 34578999999999999999999999999999999988765432 25678999999999988887765 6
Q ss_pred CCEEEEcCc-----h--------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 164 VRSIICPSE-----G--------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
+|++|++.+ . + + ...+++.+..+||++||...+.+......|.. .
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a-----s 184 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA-----T 184 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH-----H
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH-----H
Confidence 899998721 0 0 1 11134566789999999888764333222322 3
Q ss_pred HHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
|...+. .+...|++++.|+||++.
T Consensus 185 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 215 (275)
T 4imr_A 185 KAAQHNLIQSQARDFAGDNVLLNTLAPGLVD 215 (275)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEecccc
Confidence 333333 334569999999999873
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.55 E-value=8.6e-14 Score=121.63 Aligned_cols=142 Identities=14% Similarity=0.125 Sum_probs=104.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------c
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
++.+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+.++..+++|++|++++++++ .
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999998765433 3567889999999999888765 3
Q ss_pred CCCEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 GVRSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 ~~d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ .+ ....|++.+-.+||++||.....+.+....|..++.
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa 163 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG 163 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence 6899997611 01 111256677789999999987665443333332221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+..++..+|++++.|.||++.
T Consensus 164 l~~ltr~lA~ela~~gIrVN~V~PG~i~ 191 (254)
T 4fn4_A 164 LIGLTRSIAAHYGDQGIRAVAVLPGTVK 191 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCCC
Confidence 223344455566789999999999873
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.55 E-value=6e-14 Score=122.78 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=98.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++|+||||+|+||++++++|+++|++|++++|+... .+.. .+..+.++.+|++|.+++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4457899999999999999999999999999999996432 2211 24578999999999999887775
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + +...+++.+..+||++||...+.+..+...|..
T Consensus 106 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a---- 181 (271)
T 4iin_A 106 GGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSA---- 181 (271)
T ss_dssp SSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHH----
T ss_pred CCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHH----
Confidence 7899998721 0 0 111134556789999999887655443333322
Q ss_pred HHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...+++++.|+||++.
T Consensus 182 -sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 213 (271)
T 4iin_A 182 -SKGGMIAMSKSFAYEGALRNIRFNSVTPGFIE 213 (271)
T ss_dssp -HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBC
T ss_pred -HHHHHHHHHHHHHHHHHHhCcEEEEEEeCccc
Confidence 34333333 33479999999999874
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.55 E-value=5e-14 Score=124.13 Aligned_cols=135 Identities=14% Similarity=0.168 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc------C-CccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF------G-TYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~------~-~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++|+||||+|+||++++++|+++|++|++++|+.++.+... + ..+.++.+|++|.+++.++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999986654321 2 368899999999998887765
Q ss_pred CCCEEEEcC-c-----------h-H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 GVRSIICPS-E-----------G-F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~-~-----------~-~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
++|++|++. . . + +..+ +++ +.++||++||..++.+.++...|..
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~a----- 179 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSA----- 179 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHH-----
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHH-CCCEEEEECCcccccCCCCccHHHH-----
Confidence 789999761 1 0 0 0111 222 2479999999887655433333322
Q ss_pred HHHHHHHH-------H--HhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------L--MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l--~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ + ...++++++++||++.
T Consensus 180 sK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~ 213 (286)
T 1xu9_A 180 SKFALDGFFSSIRKEYSVSRVNVSITLCVLGLID 213 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccC
Confidence 33332222 2 3468999999999863
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.4e-14 Score=121.12 Aligned_cols=142 Identities=13% Similarity=0.106 Sum_probs=96.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.+++ .+..+.++.+|++|.+++.++++ .+|
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 85 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVD 85 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 34578999999999999999999999999999999998765543 35678999999999999887775 689
Q ss_pred EEEEcCc-----h---------H-------------HH----HHHHhCC----CCEEEEecccccccCCCCcccccchhH
Q 024643 166 SIICPSE-----G---------F-------------IS----NAGSLKG----VQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 166 ~vi~~~~-----~---------~-------------~~----~aa~~~g----v~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
++|++.+ . + +. ..+++.+ ..+||++||...+.+.+....|..++.
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa 165 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG 165 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence 9998711 0 0 00 1122221 458999999887765443323322221
Q ss_pred H--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 R--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ...+.....+...+++++.|+||++.
T Consensus 166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 194 (261)
T 3n74_A 166 WVVSVTKALAIELAPAKIRVVALNPVAGE 194 (261)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCccc
Confidence 1 11122223334579999999999863
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.54 E-value=5.4e-14 Score=124.59 Aligned_cols=141 Identities=12% Similarity=0.109 Sum_probs=94.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----------cCCccEEeeeCCCCHHHHHHHHc--
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR-- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----------~~~~v~~i~~D~~d~~~l~~~~~-- 162 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 94 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 94 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence 34578999999999999999999999999999999987654321 24578899999999999988775
Q ss_pred -----CCCEEEEcCc-----h--------H-------------HHHHH----HhCCCCEEEEecccccccCCCCcccccc
Q 024643 163 -----GVRSIICPSE-----G--------F-------------ISNAG----SLKGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 163 -----~~d~vi~~~~-----~--------~-------------~~~aa----~~~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
.+|++|++.+ . + +..++ .+.+.++||++||.. ....+....|..
T Consensus 95 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~ 173 (303)
T 1yxm_A 95 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGA 173 (303)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHH
Confidence 4899998721 0 0 11111 123357999999987 333222222221
Q ss_pred hhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+. +...+.....+...|+++++||||++.
T Consensus 174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 205 (303)
T 1yxm_A 174 ARAGVYNLTKSLALEWACSGIRINCVAPGVIY 205 (303)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCCcc
Confidence 111 111112222233469999999999874
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.54 E-value=5.8e-14 Score=122.74 Aligned_cols=137 Identities=13% Similarity=0.135 Sum_probs=99.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------c--CCccEEeeeCCCCHHHHHHHHc---CC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------F--GTYVESMAGDASNKKFLKTALR---GV 164 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~--~~~v~~i~~D~~d~~~l~~~~~---~~ 164 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. . ...+..+.+|++|++++.++++ .+
T Consensus 7 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 7 QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 34578999999999999999999999999999999998654432 1 3457789999999999888775 78
Q ss_pred CEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+ . + +...+++.+.++||++||...+.+......|. ..|
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK 161 (267)
T 3t4x_A 87 DILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS-----ATK 161 (267)
T ss_dssp SEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH-----HHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH-----HHH
Confidence 99998721 0 0 11124556778999999998876544332332 244
Q ss_pred HHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 215 EQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
...+.+. ...|++++.|+||++.
T Consensus 162 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 191 (267)
T 3t4x_A 162 TMQLSLSRSLAELTTGTNVTVNTIMPGSTL 191 (267)
T ss_dssp HHHHHHHHHHHHHTTTSEEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCCeec
Confidence 4444332 3368999999999863
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.54 E-value=7.2e-14 Score=126.00 Aligned_cols=135 Identities=17% Similarity=0.203 Sum_probs=96.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-----chhhh------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAMES------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-----~~~~~------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
.+++++||||+|+||++++++|+++|++|++.+|+.. +.+.+ .+..+.++.+|++|++++.++++
T Consensus 4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~ 83 (324)
T 3u9l_A 4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG 83 (324)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999741 11111 24578999999999999988876
Q ss_pred ---CCCEEEEcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCC-CCcccccch
Q 024643 163 ---GVRSIICPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGS-GGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~-~~~~~~~~~ 208 (265)
++|++|++.+ . + +.. .+++.+.++||++||....... +....|
T Consensus 84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y--- 160 (324)
T 3u9l_A 84 EDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPY--- 160 (324)
T ss_dssp HHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHH---
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhH---
Confidence 7999998721 0 0 111 1456678899999998876432 222222
Q ss_pred hHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
...|..+|.+ +...|+++++|+||++.
T Consensus 161 --~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~ 194 (324)
T 3u9l_A 161 --FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFT 194 (324)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC-
T ss_pred --HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccc
Confidence 2344444433 33479999999999873
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.54 E-value=1.5e-13 Score=119.53 Aligned_cols=138 Identities=9% Similarity=0.036 Sum_probs=99.1
Q ss_pred CCCCCCEEEEEcCCc-HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 95 PEEARDAVLVTDGDS-DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG-~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
....+++++||||+| +||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++
T Consensus 18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 446678999999997 799999999999999999999998654332 13578999999999999887775
Q ss_pred ---CCCEEEEcCc-----h--------H-------------HH----HHHHhC-CCCEEEEecccccccCCCCcccccch
Q 024643 163 ---GVRSIICPSE-----G--------F-------------IS----NAGSLK-GVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~-----~--------~-------------~~----~aa~~~-gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ . + +. ..+++. +..+||++||...+....+...|..
T Consensus 98 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~- 176 (266)
T 3o38_A 98 KAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAA- 176 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHH-
T ss_pred HhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHH-
Confidence 6799998721 0 0 11 113333 5679999999887765443333322
Q ss_pred hHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 177 ----sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 208 (266)
T 3o38_A 177 ----AKAGVMALTRCSAIEAVEFGVRINAVSPSIAR 208 (266)
T ss_dssp ----HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred ----HHHHHHHHHHHHHHHHHHcCcEEEEEeCCccc
Confidence 3333333 334579999999999864
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=5.8e-14 Score=121.44 Aligned_cols=136 Identities=12% Similarity=0.059 Sum_probs=94.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCc--chhhh---c-CCccEEeeeCCCCH-HHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKR--NAMES---F-GTYVESMAGDASNK-KFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~--~~~~~---~-~~~v~~i~~D~~d~-~~l~~~~~------ 162 (265)
..+++++||||+|+||++++++|+++|++ |++++|+.. ..+++ . +..++++.+|++|+ +++.++++
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence 35689999999999999999999999997 999999863 22222 1 34688899999998 77776665
Q ss_pred -CCCEEEEcCc-----hH-------------HHHH----HHhCC---CCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 163 -GVRSIICPSE-----GF-------------ISNA----GSLKG---VQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 163 -~~d~vi~~~~-----~~-------------~~~a----a~~~g---v~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
++|++|++.+ .+ +..+ +.+.+ ..+||++||..++.+.+....|. ..|..
T Consensus 83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a 157 (254)
T 1sby_A 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS-----ASKAA 157 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH-----HHHHH
T ss_pred CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHH-----HHHHH
Confidence 7899998721 10 1111 22222 46899999998875543332222 24444
Q ss_pred HHHHH-------HhCCCCEEEEeCCCcc
Q 024643 217 DESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
.+.+. ...|+++++|+||++.
T Consensus 158 ~~~~~~~la~~~~~~gi~v~~v~Pg~v~ 185 (254)
T 1sby_A 158 VVSFTNSLAKLAPITGVTAYSINPGITR 185 (254)
T ss_dssp HHHHHHHHHHHHHHHSEEEEEEEECSEE
T ss_pred HHHHHHHHHHHhccCCeEEEEEecCCcc
Confidence 43332 3379999999999863
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.7e-14 Score=122.00 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=96.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC------------cchhh------hcCCccEEeeeCCCCHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKFL 157 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~------------~~~~~------~~~~~v~~i~~D~~d~~~l 157 (265)
...+++++||||+|+||++++++|+++|++|++++|+. +..+. ..+..+.++++|++|++++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 45678999999999999999999999999999999872 22211 1346789999999999999
Q ss_pred HHHHc-------CCCEEEEcCc---------hH-------------HHH----HHHhCC-CCEEEEecccccccCCCCcc
Q 024643 158 KTALR-------GVRSIICPSE---------GF-------------ISN----AGSLKG-VQHVILLSQLSVYRGSGGIQ 203 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~~~---------~~-------------~~~----aa~~~g-v~r~V~iSS~~v~~~~~~~~ 203 (265)
.++++ .+|++|++.+ .+ +.. .+.+.+ ..+||++||...+.......
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 169 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSAD 169 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCC
Confidence 88775 7899998721 00 111 133333 57999999988765431110
Q ss_pred cccchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 204 ALMKGNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 204 ~~~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
+. ...+...|...+.+ +...|++++.|+||++.
T Consensus 170 ~~-~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 209 (278)
T 3sx2_A 170 PG-SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVE 209 (278)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred CC-chHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCcc
Confidence 10 01111244444433 34478999999999874
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.53 E-value=4.4e-14 Score=123.46 Aligned_cols=140 Identities=16% Similarity=0.227 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. ....+.++.+|++|++++.++++ .+|+
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~ 83 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 83 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence 3568999999999999999999999999999999998765443 22468889999999999887765 4799
Q ss_pred EEEcCc-----h--------H-------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhH--HHHHHH
Q 024643 167 IICPSE-----G--------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~ 216 (265)
+|++.+ . + +..++.. ....+||++||..++ ..+....|..++. ....+.
T Consensus 84 lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~ 162 (263)
T 2a4k_A 84 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLART 162 (263)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHH
Confidence 998721 0 0 1111111 124699999999876 3222112222111 112223
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+...|+++++|+||++.
T Consensus 163 la~e~~~~gi~v~~v~PG~v~ 183 (263)
T 2a4k_A 163 LALELARKGVRVNVLLPGLIQ 183 (263)
T ss_dssp HHHHHTTTTCEEEEEEECSBC
T ss_pred HHHHhhhhCcEEEEEEeCcCc
Confidence 333445679999999999874
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.53 E-value=9.1e-14 Score=122.05 Aligned_cols=142 Identities=15% Similarity=0.216 Sum_probs=99.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc------CCCE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR------GVRS 166 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~------~~d~ 166 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++++|++|.+++.++++ .+|.
T Consensus 27 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~ 106 (281)
T 3ppi_A 27 QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRY 106 (281)
T ss_dssp GGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEE
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCe
Confidence 45678999999999999999999999999999999998765443 35678999999999999988775 5788
Q ss_pred EEEc-Cc-------------h-----H-------------HHHH----HHh------CCCCEEEEecccccccCCCCccc
Q 024643 167 IICP-SE-------------G-----F-------------ISNA----GSL------KGVQHVILLSQLSVYRGSGGIQA 204 (265)
Q Consensus 167 vi~~-~~-------------~-----~-------------~~~a----a~~------~gv~r~V~iSS~~v~~~~~~~~~ 204 (265)
+|++ .. . + +..+ +.. .+..+||++||...+........
T Consensus 107 lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 186 (281)
T 3ppi_A 107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTA 186 (281)
T ss_dssp EEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHH
T ss_pred EEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcc
Confidence 8876 10 0 0 0011 222 34569999999988765543333
Q ss_pred ccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 205 LMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
|..++.. ...+.....+...|+++++|+||++.
T Consensus 187 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 221 (281)
T 3ppi_A 187 YAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMK 221 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred cHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCC
Confidence 3322211 11122223344579999999999873
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.2e-13 Score=121.79 Aligned_cols=137 Identities=17% Similarity=0.181 Sum_probs=92.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++| +.++.+.. .+..+.++++|++|++++.++++
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 456789999999999999999999999999999996 44433221 24578999999999988887775
Q ss_pred -CCCEEEEcCch---------------H-----------------HHHHHHhCC---CCEEEEecccccccCCCCccccc
Q 024643 163 -GVRSIICPSEG---------------F-----------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 163 -~~d~vi~~~~~---------------~-----------------~~~aa~~~g---v~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
.+|++|++.+. + +...+++.+ ..+||++||..++...+....|.
T Consensus 106 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~ 185 (280)
T 4da9_A 106 GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYC 185 (280)
T ss_dssp SCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHH
T ss_pred CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHH
Confidence 78999976211 0 011133333 56999999988765543332332
Q ss_pred chhHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 207 KGNARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|++++.|+||++.
T Consensus 186 -----asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 218 (280)
T 4da9_A 186 -----MSKAGLAAFSQGLALRLAETGIAVFEVRPGIIR 218 (280)
T ss_dssp -----HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred -----HHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCc
Confidence 23433333 234478999999999874
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.8e-13 Score=116.92 Aligned_cols=133 Identities=11% Similarity=0.049 Sum_probs=94.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc-------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR-------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~-------~~ 164 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+.++.+|++|++++.++++ .+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999997654432 35678999999999999988776 68
Q ss_pred CEEEEcCc-----h--------H-------------HHHH----HHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 165 RSIICPSE-----G--------F-------------ISNA----GSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 165 d~vi~~~~-----~--------~-------------~~~a----a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
|++|++.+ . + +..+ ++ .+..++|++||.......+....| ...|
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~~~~~~~~~Y-----~~sK 155 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSARLIPYGGGY-----VSTK 155 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGSSCCTTCHHH-----HHHH
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhcccCCCcchH-----HHHH
Confidence 99998711 0 0 1111 22 234577777776655433222222 2244
Q ss_pred HHHHHHHH-----hCCCCEEEEeCCCcc
Q 024643 215 EQDESMLM-----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~-----~~gl~~tivRPg~l~ 237 (265)
...+.+.+ ..+++++.|+||++.
T Consensus 156 aa~~~~~~~l~~~~~~i~v~~v~PG~v~ 183 (235)
T 3l77_A 156 WAARALVRTFQIENPDVRFFELRPGAVD 183 (235)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEEEECSBS
T ss_pred HHHHHHHHHHhhcCCCeEEEEEeCCccc
Confidence 44444332 369999999999874
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=2e-13 Score=120.21 Aligned_cols=142 Identities=14% Similarity=0.079 Sum_probs=97.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC----------------cchhhh------cCCccEEeeeCCCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK----------------RNAMES------FGTYVESMAGDASN 153 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~----------------~~~~~~------~~~~v~~i~~D~~d 153 (265)
...+++++||||+++||++++++|+++|++|++++|+. +++++. .+..+.++++|++|
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 45678999999999999999999999999999999872 222211 24578899999999
Q ss_pred HHHHHHHHc-------CCCEEEEcCc-----h-H---------------------H----HHHHHhCC-CCEEEEecccc
Q 024643 154 KKFLKTALR-------GVRSIICPSE-----G-F---------------------I----SNAGSLKG-VQHVILLSQLS 194 (265)
Q Consensus 154 ~~~l~~~~~-------~~d~vi~~~~-----~-~---------------------~----~~aa~~~g-v~r~V~iSS~~ 194 (265)
++++.++++ .+|++|++.+ . + + ...+.+.+ ..+||++||..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~ 167 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG 167 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence 999887775 7899998711 0 0 0 11133333 56999999998
Q ss_pred cccCCCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 195 VYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 195 v~~~~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+...+....|..++.. ...+.....+...|++++.|+||++.
T Consensus 168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~ 212 (286)
T 3uve_A 168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVK 212 (286)
T ss_dssp GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccc
Confidence 87654433333222211 11122233344579999999999874
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.53 E-value=3e-14 Score=135.97 Aligned_cols=129 Identities=17% Similarity=0.178 Sum_probs=92.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG----- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~----- 173 (265)
+|+|+||||||+||++|+++|+++|++|++++|+..+.. .+.+|+.|. +.++++++|+||++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------~v~~d~~~~--~~~~l~~~D~Vih~A~~~~~~~ 216 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------KRFWDPLNP--ASDLLDGADVLVHLAGEPIFGR 216 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------CEECCTTSC--CTTTTTTCSEEEECCCC-----
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------ceeecccch--hHHhcCCCCEEEECCCCccccc
Confidence 689999999999999999999999999999999876532 256777653 45677899999987210
Q ss_pred ------------------HHHHH-HHhCCCCEEEEecccccccCCCCc------ccccchhHH-HHHHHHHHH---HHhC
Q 024643 174 ------------------FISNA-GSLKGVQHVILLSQLSVYRGSGGI------QALMKGNAR-KLAEQDESM---LMAS 224 (265)
Q Consensus 174 ------------------~~~~a-a~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~~~~-~~k~~~E~~---l~~~ 224 (265)
.+.++ ++..++++|||+||.++|...... .+. +...| ..+...|++ ....
T Consensus 217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~-~~~~y~~~~~~~E~~~~~~~~~ 295 (516)
T 3oh8_A 217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESES-GDDFLAEVCRDWEHATAPASDA 295 (516)
T ss_dssp CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCC-CSSHHHHHHHHHHHTTHHHHHT
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCC-CcChHHHHHHHHHHHHHHHHhC
Confidence 12334 566789999999999998621111 111 12222 244444543 4468
Q ss_pred CCCEEEEeCCCccC
Q 024643 225 GIPYTIIRTGVLQN 238 (265)
Q Consensus 225 gl~~tivRPg~l~~ 238 (265)
|++++++|||++..
T Consensus 296 gi~~~ilRp~~v~G 309 (516)
T 3oh8_A 296 GKRVAFIRTGVALS 309 (516)
T ss_dssp TCEEEEEEECEEEB
T ss_pred CCCEEEEEeeEEEC
Confidence 99999999998654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-14 Score=122.36 Aligned_cols=131 Identities=9% Similarity=0.060 Sum_probs=91.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCC----CEEEEcCc--h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGV----RSIICPSE--G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~----d~vi~~~~--~ 173 (265)
++|+||||+|+||++++++|+++|++|++++|+.++... . +.+|++|.+++.++++.+ |++|++.+ .
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence 689999999999999999999999999999998865432 1 678999999999988654 99998721 1
Q ss_pred ----H-----------------HHHHHHhCCCCEEEEecccccccCCCCc----------------------ccccchhH
Q 024643 174 ----F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGI----------------------QALMKGNA 210 (265)
Q Consensus 174 ----~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~----------------------~~~~~~~~ 210 (265)
+ +...+++.+.++||++||..++...... .+......
T Consensus 75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (257)
T 1fjh_A 75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLA 154 (257)
T ss_dssp TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHH
T ss_pred CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccH
Confidence 0 1112445677899999999887311000 01001112
Q ss_pred H-HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 211 R-KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~-~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
| ..|...+.+. ...|+++++|+||++.
T Consensus 155 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 189 (257)
T 1fjh_A 155 YAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATE 189 (257)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC--
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCC
Confidence 2 3555555443 3479999999999863
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.9e-13 Score=118.48 Aligned_cols=137 Identities=11% Similarity=0.080 Sum_probs=98.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCC--CCHHHHHHHHc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR---- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~--~d~~~l~~~~~---- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. ....+.++.+|+ +|.+++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998665432 233688999999 99988877765
Q ss_pred ---CCCEEEEcCc------h--------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 ---GVRSIICPSE------G--------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~------~--------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ . + + ...+++.+.++||++||...+........|.
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~-- 166 (252)
T 3f1l_A 89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA-- 166 (252)
T ss_dssp HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH--
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH--
Confidence 6899998721 0 0 1 1114566778999999988765544332222
Q ss_pred hHHHHHHHHHHHHH----h--CCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESMLM----A--SGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~l~----~--~gl~~tivRPg~l~ 237 (265)
..|...+.+.+ + ..++++.|.||++.
T Consensus 167 ---asK~a~~~l~~~la~e~~~~irvn~v~PG~v~ 198 (252)
T 3f1l_A 167 ---ASKFATEGMMQVLADEYQQRLRVNCINPGGTR 198 (252)
T ss_dssp ---HHHHHHHHHHHHHHHHTTTTCEEEEEECCSBS
T ss_pred ---HHHHHHHHHHHHHHHHhcCCcEEEEEecCccc
Confidence 24444443322 1 23999999999863
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.52 E-value=7.4e-14 Score=123.75 Aligned_cols=136 Identities=13% Similarity=0.137 Sum_probs=99.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc---
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
..+++++||||+|+||++++++|+++|+ +|++++|+.++.++.. +..+.++.+|++|++++.++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999997 9999999987654331 4568899999999999988875
Q ss_pred ----CCCEEEEcCc-----h---------H-------------H----HHHHHhCCCCEEEEecccccccCCCCcccccc
Q 024643 163 ----GVRSIICPSE-----G---------F-------------I----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 163 ----~~d~vi~~~~-----~---------~-------------~----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
.+|++|++.+ . + + ...+++.+.++||++||...+...+....|..
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a 190 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCA 190 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHH
Confidence 5799998711 0 0 1 11145567789999999987755443323322
Q ss_pred hhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 208 GNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|++++.|+||++.
T Consensus 191 -----sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~ 222 (287)
T 3rku_A 191 -----SKFAVGAFTDSLRKELINTKIRVILIAPGLVE 222 (287)
T ss_dssp -----HHHHHHHHHHHHHHHTTTSSCEEEEEEESCEE
T ss_pred -----HHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCc
Confidence 44333333 33479999999999874
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=2.9e-13 Score=119.94 Aligned_cols=137 Identities=18% Similarity=0.247 Sum_probs=97.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-------hcCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-------~~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.+...+ ..+..+.++.+|++|++++.++++
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4567899999999999999999999999999999998753211 124578899999999999887775
Q ss_pred -CCCEEEEcCc-----h-H---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 -GVRSIICPSE-----G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 -~~d~vi~~~~-----~-~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+ . + +..++.. ...++||++||..++........|..
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a----- 198 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSA----- 198 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHH-----
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHH-----
Confidence 6899998711 0 0 1111221 12459999999988765443333322
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|++++.|+||++.
T Consensus 199 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 230 (291)
T 3ijr_A 199 TKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIW 230 (291)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCc
Confidence 4433333 334469999999999863
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.52 E-value=1.2e-13 Score=120.07 Aligned_cols=136 Identities=13% Similarity=0.185 Sum_probs=97.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++. .+..+.++.+|++|++++.++++ .+|+
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4578999999999999999999999999999999998765443 24578999999999998876654 6899
Q ss_pred EEEcCc-----h--------H-------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHHHHHH
Q 024643 167 IICPSE-----G--------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDE 218 (265)
Q Consensus 167 vi~~~~-----~--------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E 218 (265)
+|++.+ . + +..++.. ....+||++||...+.+.+....|. ..|...+
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asKaa~~ 160 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYS-----ASKAALV 160 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHH-----HHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHH-----HHHHHHH
Confidence 998721 0 0 1111211 1135899999998876544332332 2443333
Q ss_pred HH-------HHhCCCCEEEEeCCCcc
Q 024643 219 SM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~-------l~~~gl~~tivRPg~l~ 237 (265)
.+ +...|++++.|+||++.
T Consensus 161 ~~~~~la~e~~~~gi~vn~v~PG~v~ 186 (255)
T 4eso_A 161 SFASVLAAELLPRGIRVNSVSPGFID 186 (255)
T ss_dssp HHHHHHHHHTGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHhhhCcEEEEEecCccc
Confidence 33 33469999999999874
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-13 Score=117.10 Aligned_cols=137 Identities=12% Similarity=0.059 Sum_probs=97.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCC--CCHHHHHHHHc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDA--SNKKFLKTALR---- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~--~d~~~l~~~~~---- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.++.++. ....+.++.+|+ +|.+++.++++
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999998665432 124677788877 89888876654
Q ss_pred ---CCCEEEEcCch--------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 ---GVRSIICPSEG--------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~~--------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+. + +.. .+++.+..+||++||...+.+......|..
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~- 169 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGV- 169 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHH-
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHH-
Confidence 78999987210 0 111 134566789999999887655443333322
Q ss_pred hHHHHHHHHHHH-------HHh-CCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESM-------LMA-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~-------l~~-~gl~~tivRPg~l~ 237 (265)
.|...+.+ +.. .+++++.|+||++.
T Consensus 170 ----sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~ 202 (247)
T 3i1j_A 170 ----SKFATEGLMQTLADELEGVTAVRANSINPGATR 202 (247)
T ss_dssp ----HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCS
T ss_pred ----HHHHHHHHHHHHHHHhcCCCCeEEEEEecCccc
Confidence 34333332 333 68999999999873
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.9e-13 Score=119.91 Aligned_cols=142 Identities=13% Similarity=0.094 Sum_probs=96.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-------------Ccchhhh------cCCccEEeeeCCCCHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------KRNAMES------FGTYVESMAGDASNKKF 156 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-------------~~~~~~~------~~~~v~~i~~D~~d~~~ 156 (265)
...+++++||||+++||++++++|+++|++|++++|+ .++.++. .+..+.++.+|++|.++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 4567899999999999999999999999999999984 2222211 24578899999999999
Q ss_pred HHHHHc-------CCCEEEEcCc-----h--------H-------------HH----HHHHhCC-CCEEEEecccccccC
Q 024643 157 LKTALR-------GVRSIICPSE-----G--------F-------------IS----NAGSLKG-VQHVILLSQLSVYRG 198 (265)
Q Consensus 157 l~~~~~-------~~d~vi~~~~-----~--------~-------------~~----~aa~~~g-v~r~V~iSS~~v~~~ 198 (265)
+.++++ .+|++|++.+ . + +. ..+.+.+ ..+||++||...+..
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 167 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM 167 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence 887764 5899998721 0 0 11 1133333 569999999988765
Q ss_pred CCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 199 ~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+....|..++.. ...+.....+...|++++.|+||++.
T Consensus 168 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 208 (277)
T 3tsc_A 168 QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVN 208 (277)
T ss_dssp CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCc
Confidence 4433333222211 11122223344579999999999873
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.6e-13 Score=121.17 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-------CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-------~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|++++|+.++.++.. +..+.++++|++|++++.++++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999986544321 2235899999999999887765
Q ss_pred CCCEEEEcCc------hH-------------------------HHHHHHhCC--CCEEEEecccccccCCCCcccccchh
Q 024643 163 GVRSIICPSE------GF-------------------------ISNAGSLKG--VQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 ~~d~vi~~~~------~~-------------------------~~~aa~~~g--v~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|++|++.+ .+ +...+++.+ ..+||++||...+....+...|..++
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK 190 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATK 190 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHH
Confidence 5799998711 00 111134443 57999999988776544333332222
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.. ...+.....+...|++++.|+||++.
T Consensus 191 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 220 (281)
T 4dry_A 191 HAITGLTKSTALDGRMHDIACGQIDIGNAA 220 (281)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEECBC
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEEECcCc
Confidence 11 11122223344579999999999864
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.51 E-value=1.1e-13 Score=124.79 Aligned_cols=134 Identities=17% Similarity=0.204 Sum_probs=96.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------------cCCccEEeeeCCCCHHHHHHHHcC---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------------FGTYVESMAGDASNKKFLKTALRG--- 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------------~~~~v~~i~~D~~d~~~l~~~~~~--- 163 (265)
+++|+||||+|+||++++++|+++|++|+++.|+....+.. .+..+.++.+|++|.+++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 46899999999999999999999999999888865433211 125688999999999999998875
Q ss_pred --CCEEEEcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 164 --VRSIICPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 164 --~d~vi~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
+|++|++.+ . + +.. .+++.+.++||++||...+........|.
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~----- 156 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC----- 156 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH-----
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH-----
Confidence 899998721 0 0 111 14456778999999988765443222222
Q ss_pred HHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|..++.+ +...|+++++|+||++.
T Consensus 157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~ 189 (327)
T 1jtv_A 157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVH 189 (327)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccc
Confidence 244443333 34579999999999874
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-13 Score=119.39 Aligned_cols=144 Identities=18% Similarity=0.192 Sum_probs=96.0
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
....++++|+||||+|+||++++++|+++|++|+++.+ +.++.++. .+..+.++.+|++|++++.++++
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 100 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA 100 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 34556789999999999999999999999999987664 44333221 24578999999999999888775
Q ss_pred ---CCCEEEEcCc-----h--------H-------------HHHH----H-HhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 ---GVRSIICPSE-----G--------F-------------ISNA----G-SLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ---~~d~vi~~~~-----~--------~-------------~~~a----a-~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|.+|++.+ . + +..+ + ++.+..+||++||...+.+......|..+
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 180 (267)
T 4iiu_A 101 QHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAA 180 (267)
T ss_dssp HHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred HhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHH
Confidence 7899998721 0 0 1111 1 24567899999998876554433333222
Q ss_pred hHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.. ...+.....+...|+++++|+||++.
T Consensus 181 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 211 (267)
T 4iiu_A 181 KAGIIGATKALAIELAKRKITVNCIAPGLID 211 (267)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEEEeeec
Confidence 211 11122223344579999999999874
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.1e-13 Score=119.32 Aligned_cols=142 Identities=13% Similarity=0.140 Sum_probs=97.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC------------cchhh------hcCCccEEeeeCCCCHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKFL 157 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~------------~~~~~------~~~~~v~~i~~D~~d~~~l 157 (265)
...+++++||||+++||++++++|+++|++|++++|+. +++.+ ..+..+.++++|++|.+++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 45678999999999999999999999999999999872 22211 1345788999999999998
Q ss_pred HHHHc-------CCCEEEEcCc-----h-H---------------------HHH----HHHhC-CCCEEEEecccccccC
Q 024643 158 KTALR-------GVRSIICPSE-----G-F---------------------ISN----AGSLK-GVQHVILLSQLSVYRG 198 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~~~-----~-~---------------------~~~----aa~~~-gv~r~V~iSS~~v~~~ 198 (265)
.++++ .+|++|++.+ . + +.. .+.+. +..+||++||...+..
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 184 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG 184 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence 87775 7899998611 0 0 111 12333 3679999999988765
Q ss_pred CCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 199 SGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 199 ~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
......|..++.. ...+.....+...|++++.|+||++.
T Consensus 185 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 225 (299)
T 3t7c_A 185 AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVA 225 (299)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcc
Confidence 4433333222211 11122223344579999999999874
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.51 E-value=4.7e-14 Score=124.55 Aligned_cols=126 Identities=14% Similarity=0.140 Sum_probs=82.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-------
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE------- 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~------- 172 (265)
|+|||||||||||++|+++|+++||+|++++|++.+. .+ .. .+...+.++++|+||++..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------~~---~~----~~~~~~~l~~~d~vihla~~~i~~~~ 67 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------RI---TW----DELAASGLPSCDAAVNLAGENILNPL 67 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------EE---EH----HHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------ee---ec----chhhHhhccCCCEEEEeccCcccchh
Confidence 7899999999999999999999999999999986432 11 11 2333466789999998621
Q ss_pred -----h--------------HHHHHHHhCCC--CEEEEecccccccCCCCc-----ccccchhHHH-HHHHHHHH--HHh
Q 024643 173 -----G--------------FISNAGSLKGV--QHVILLSQLSVYRGSGGI-----QALMKGNARK-LAEQDESM--LMA 223 (265)
Q Consensus 173 -----~--------------~~~~aa~~~gv--~r~V~iSS~~v~~~~~~~-----~~~~~~~~~~-~k~~~E~~--l~~ 223 (265)
. .+.++++..++ .+||++||.++|...... .+..+...+. .+...|.. ...
T Consensus 68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~~~~~ 147 (298)
T 4b4o_A 68 RRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPG 147 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHHCCSS
T ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHHHHhhc
Confidence 0 02333455554 468999999988654221 1112222221 22333332 345
Q ss_pred CCCCEEEEeCCCccC
Q 024643 224 SGIPYTIIRTGVLQN 238 (265)
Q Consensus 224 ~gl~~tivRPg~l~~ 238 (265)
.+++++++||+.+..
T Consensus 148 ~~~~~~~~r~~~v~g 162 (298)
T 4b4o_A 148 DSTRQVVVRSGVVLG 162 (298)
T ss_dssp SSSEEEEEEECEEEC
T ss_pred cCCceeeeeeeeEEc
Confidence 789999999997643
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.51 E-value=2.9e-13 Score=121.45 Aligned_cols=142 Identities=13% Similarity=0.130 Sum_probs=96.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC------------cchhhh------cCCccEEeeeCCCCHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAMES------FGTYVESMAGDASNKKFL 157 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~------------~~~~~~------~~~~v~~i~~D~~d~~~l 157 (265)
...+++++||||+|+||+++++.|+++|++|++++|+. +++.+. .+..+.++.+|++|++++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL 122 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 45678999999999999999999999999999998862 221111 245788999999999998
Q ss_pred HHHHc-------CCCEEEEcCc-----h--------H-------------H----HHHHHhCC-CCEEEEecccccccCC
Q 024643 158 KTALR-------GVRSIICPSE-----G--------F-------------I----SNAGSLKG-VQHVILLSQLSVYRGS 199 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~~~-----~--------~-------------~----~~aa~~~g-v~r~V~iSS~~v~~~~ 199 (265)
.++++ .+|++|++.+ . + + ...+.+.+ ..+||++||...+...
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~ 202 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA 202 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC
Confidence 88775 7899998711 0 0 0 11133333 5689999998887654
Q ss_pred CCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 200 GGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 200 ~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+....|..++.. ...+.....+...|+++++|+||++.
T Consensus 203 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 242 (317)
T 3oec_A 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVN 242 (317)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBS
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccc
Confidence 433333222211 11122223344579999999999873
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=4.5e-13 Score=116.57 Aligned_cols=137 Identities=13% Similarity=0.174 Sum_probs=97.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHHH-------cCCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTAL-------RGVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~~-------~~~d~vi~ 169 (265)
.|+|+||||+++||+++++.|+++|++|++.+|+.++..+.. ..++..+++|++|++++++++ ..+|++|+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 478999999999999999999999999999999987765542 356888999999999887665 36899997
Q ss_pred cCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHH
Q 024643 170 PSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 217 (265)
Q Consensus 170 ~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~ 217 (265)
+.+ .+ ....+++.+ .+||++||.....+.+....|..++. ....+.+
T Consensus 82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~l 160 (247)
T 3ged_A 82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK-GRIINIASTRAFQSEPDSEAYASAKGGIVALTHAL 160 (247)
T ss_dssp CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 621 10 111244444 79999999988765543333333221 1222233
Q ss_pred HHHHHhCCCCEEEEeCCCcc
Q 024643 218 ESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l~ 237 (265)
..++. .+++++.|.||++.
T Consensus 161 A~ela-~~IrVN~I~PG~i~ 179 (247)
T 3ged_A 161 AMSLG-PDVLVNCIAPGWIN 179 (247)
T ss_dssp HHHHT-TTSEEEEEEECSBC
T ss_pred HHHHC-CCCEEEEEecCcCC
Confidence 33344 48999999999873
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-13 Score=118.61 Aligned_cols=135 Identities=15% Similarity=0.137 Sum_probs=94.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh----h---cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----S---FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~---~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++++||||+|+||++++++|+++|++|++++|+.....+ . .+..+.++++|++|++++.++++ .
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999887643211 1 23568999999999999988775 7
Q ss_pred CCEEEEcCc-------hH---------------------HHH----HHHhCCCCEEEEecccccccCC--CCcccccchh
Q 024643 164 VRSIICPSE-------GF---------------------ISN----AGSLKGVQHVILLSQLSVYRGS--GGIQALMKGN 209 (265)
Q Consensus 164 ~d~vi~~~~-------~~---------------------~~~----aa~~~gv~r~V~iSS~~v~~~~--~~~~~~~~~~ 209 (265)
+|++|++.+ .+ +.. .+++.+..+||++||.+..... .....|.
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~--- 162 (264)
T 3i4f_A 86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFA--- 162 (264)
T ss_dssp CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHH---
T ss_pred CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhH---
Confidence 899997722 00 111 1356677899999998554221 1111221
Q ss_pred HHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 163 --asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (264)
T 3i4f_A 163 --AAKVGLVSLTKTVAYEEAEYGITANMVCPGDII 195 (264)
T ss_dssp --HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred --HHHHHHHHHHHHHHHHhhhcCcEEEEEccCCcc
Confidence 244333333 33479999999999864
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.3e-13 Score=120.82 Aligned_cols=133 Identities=13% Similarity=0.111 Sum_probs=94.9
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEE
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSI 167 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~v 167 (265)
....+++++||||+|+||++++++|+++|++|++++|+.+.... ...+.+|++|.+++.++++ .+|++
T Consensus 24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l 98 (266)
T 3uxy_A 24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----DLHLPGDLREAAYADGLPGAVAAGLGRLDIV 98 (266)
T ss_dssp --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----SEECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----hhccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 34567899999999999999999999999999999998765432 2456899999988876654 78999
Q ss_pred EEcCc-----h--------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 168 ICPSE-----G--------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 168 i~~~~-----~--------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|++.+ . + +.. .+++.+.++||++||..++.+......|.. .|...
T Consensus 99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~a-----sKaa~ 173 (266)
T 3uxy_A 99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCL-----TKAAL 173 (266)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHH-----HHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHH-----HHHHH
Confidence 98711 0 0 111 135567789999999988765443323322 44333
Q ss_pred HHH-------HHhCCCCEEEEeCCCcc
Q 024643 218 ESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~-------l~~~gl~~tivRPg~l~ 237 (265)
+.+ +...|+++++|+||++.
T Consensus 174 ~~l~~~la~e~~~~gI~vn~v~PG~v~ 200 (266)
T 3uxy_A 174 ASLTQCMGMDHAPQGIRINAVCPNEVN 200 (266)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHHHHhhhcCcEEEEEeeCCCc
Confidence 333 34469999999999873
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.50 E-value=1e-13 Score=122.29 Aligned_cols=142 Identities=13% Similarity=0.104 Sum_probs=94.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cchhhh-------cCCccEEeeeCCCC----HHHHHHHHc-
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNAMES-------FGTYVESMAGDASN----KKFLKTALR- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~~~~-------~~~~v~~i~~D~~d----~~~l~~~~~- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+. ++.+.. .+..+.++.+|++| ++++.++++
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 45578999999999999999999999999999999997 543321 24568899999999 888877665
Q ss_pred ------CCCEEEEcCc-------------h-----H------------------HHHH----HHhCC------CCEEEEe
Q 024643 163 ------GVRSIICPSE-------------G-----F------------------ISNA----GSLKG------VQHVILL 190 (265)
Q Consensus 163 ------~~d~vi~~~~-------------~-----~------------------~~~a----a~~~g------v~r~V~i 190 (265)
.+|++|++.+ . . +..+ +++.+ ..+||++
T Consensus 100 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~i 179 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNL 179 (288)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEE
T ss_pred HHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEE
Confidence 7899998721 1 0 0000 12233 5699999
Q ss_pred cccccccCCCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 191 SQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 191 SS~~v~~~~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
||..++.+......|..++.. ...+.....+...|+++++|+||++.
T Consensus 180 sS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 228 (288)
T 2x9g_A 180 CDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSL 228 (288)
T ss_dssp CCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCS
T ss_pred ecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEecccc
Confidence 999887554333233222211 11122223344579999999999874
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-13 Score=120.35 Aligned_cols=141 Identities=11% Similarity=0.017 Sum_probs=98.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE-eCCcchhhh-------cCCccEEeeeCCCCHH-------------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES-------FGTYVESMAGDASNKK------------- 155 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~-------~~~~v~~i~~D~~d~~------------- 155 (265)
..+++++||||+|+||++++++|+++|++|++++ |+.++.+.. .+..+.++++|++|++
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 4568999999999999999999999999999999 987654322 2457889999999998
Q ss_pred ----HHHHHHc-------CCCEEEEcCc-------------------------h-H------------------HHHHHH
Q 024643 156 ----FLKTALR-------GVRSIICPSE-------------------------G-F------------------ISNAGS 180 (265)
Q Consensus 156 ----~l~~~~~-------~~d~vi~~~~-------------------------~-~------------------~~~aa~ 180 (265)
++.++++ .+|++|++.+ . . +...++
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8877765 7899998721 1 0 001133
Q ss_pred hCC------CCEEEEecccccccCCCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 181 LKG------VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 181 ~~g------v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.+ ..+||++||...+.+.+....|..++.. ...+.....+...|++++.|+||++.
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 231 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 231 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBC
T ss_pred hcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCcc
Confidence 455 6799999999877654333333222211 11222233345579999999999873
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.50 E-value=5.1e-13 Score=117.69 Aligned_cols=136 Identities=13% Similarity=0.025 Sum_probs=94.2
Q ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCc---chhhhc--CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~--~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+ |+||++++++|+++|++|++++|+.+ ..+++. ...+.++.+|++|++++.++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 557899999999 99999999999999999999999874 222221 1247889999999999887775
Q ss_pred CCCEEEEcCc---------hH---------------------HHHHHHhC---CCCEEEEecccccccCCCCcccccchh
Q 024643 163 GVRSIICPSE---------GF---------------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 ~~d~vi~~~~---------~~---------------------~~~aa~~~---gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
++|++|++.+ .+ +..++... ..++||++||...+.+.+....|.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~--- 175 (285)
T 2p91_A 99 SLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMG--- 175 (285)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHH---
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHH---
Confidence 6899998721 00 11112111 237999999987765433222222
Q ss_pred HHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 176 --~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 208 (285)
T 2p91_A 176 --IAKAALESTVRYLAYDIAKHGHRINAISAGPVK 208 (285)
T ss_dssp --HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred --HHHHHHHHHHHHHHHHhcccCcEEEEEEeCccc
Confidence 244333333 34479999999999874
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.50 E-value=4.4e-13 Score=121.99 Aligned_cols=136 Identities=13% Similarity=0.095 Sum_probs=96.9
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-------------hcCCccEEeeeCCCCHHHHHHHH
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-------------SFGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-------------~~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
....+++++||||+++||++++++|+++|++|++++|+.++.+. ..+..+.++.+|++|++++.+++
T Consensus 41 ~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 41 GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 45568899999999999999999999999999999998764211 12456888999999999988777
Q ss_pred c-------CCCEEEEcCch-------------H-------------HH----HHHHhCCCCEEEEecccccccC--CCCc
Q 024643 162 R-------GVRSIICPSEG-------------F-------------IS----NAGSLKGVQHVILLSQLSVYRG--SGGI 202 (265)
Q Consensus 162 ~-------~~d~vi~~~~~-------------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~--~~~~ 202 (265)
+ ++|++|++.+. + +. ..+++.+..+||++||...+.. ....
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~ 200 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQH 200 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSS
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCc
Confidence 5 78999987210 0 11 1135567789999999877643 1211
Q ss_pred ccccchhHHHHHHHHHHHHH----h--CCCCEEEEeCCC
Q 024643 203 QALMKGNARKLAEQDESMLM----A--SGIPYTIIRTGV 235 (265)
Q Consensus 203 ~~~~~~~~~~~k~~~E~~l~----~--~gl~~tivRPg~ 235 (265)
..|. ..|..++.+.+ + .+++++.|.||+
T Consensus 201 ~~Y~-----aSKaal~~l~~~la~e~~~gIrvn~v~PG~ 234 (346)
T 3kvo_A 201 CAYT-----IAKYGMSMYVLGMAEEFKGEIAVNALWPKT 234 (346)
T ss_dssp HHHH-----HHHHHHHHHHHHHHHHTTTTCEEEEEECSB
T ss_pred hHHH-----HHHHHHHHHHHHHHHHhcCCcEEEEEeCCC
Confidence 1221 24443333322 1 689999999996
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.3e-13 Score=121.71 Aligned_cols=141 Identities=11% Similarity=0.017 Sum_probs=97.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE-eCCcchhhh-------cCCccEEeeeCCCCHH-------------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES-------FGTYVESMAGDASNKK------------- 155 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~-------~~~~v~~i~~D~~d~~------------- 155 (265)
..+++++||||+|+||++++++|+++|++|++++ |+.++.+.. .+..+.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 4568999999999999999999999999999999 987654322 2456889999999988
Q ss_pred ----HHHHHHc-------CCCEEEEcCc-------------------------h-H------------------HHHHHH
Q 024643 156 ----FLKTALR-------GVRSIICPSE-------------------------G-F------------------ISNAGS 180 (265)
Q Consensus 156 ----~l~~~~~-------~~d~vi~~~~-------------------------~-~------------------~~~aa~ 180 (265)
++.++++ .+|++|++.+ . . +...++
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877765 7899998711 0 0 001133
Q ss_pred hCC------CCEEEEecccccccCCCCcccccchhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 181 LKG------VQHVILLSQLSVYRGSGGIQALMKGNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 181 ~~g------v~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.+ .++||++||...+.+......|..++.. ...+.....+...|+++++|+||++.
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 268 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 268 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 445 6799999999877554333233222211 11122223344579999999999874
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.8e-13 Score=118.38 Aligned_cols=142 Identities=14% Similarity=0.100 Sum_probs=102.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+++|++|+++++++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 45789999999999999999999999999999999998665432 34578899999999998877653
Q ss_pred CCCEEEEcCc-----h--------H-----------------HHHHH-HhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 GVRSIICPSE-----G--------F-----------------ISNAG-SLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-----------------~~~aa-~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ . + ....+ ++.+-.+||++||.......+....|..++.
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 165 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGG 165 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence 5899997611 0 0 11113 3345679999999988655443333332221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+..++..+|++++.|.||++.
T Consensus 166 l~~ltr~lA~ela~~gIrVN~V~PG~i~ 193 (255)
T 4g81_D 166 IKMLTCSMAAEWAQFNIQTNAIGPGYIL 193 (255)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 223344455566789999999999873
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.49 E-value=5.1e-13 Score=118.52 Aligned_cols=137 Identities=18% Similarity=0.227 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc--chhh------hcCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAME------SFGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~--~~~~------~~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
...+++++||||+|+||++++++|+++|++|++++|+.+ ..+. ..+..+.++.+|++|.+++.++++
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999988732 2211 134678899999999998877664
Q ss_pred --CCCEEEEcCc-----h-H---------------------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhHH
Q 024643 163 --GVRSIICPSE-----G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 163 --~~d~vi~~~~-----~-~---------------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
.+|++|++.+ . + +..++... .-.+||++||..++........|..
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a---- 201 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAA---- 201 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHH----
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHH----
Confidence 7899998711 0 0 11112211 1259999999988765543333322
Q ss_pred HHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 212 KLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 202 -sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 233 (294)
T 3r3s_A 202 -TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIW 233 (294)
T ss_dssp -HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred -HHHHHHHHHHHHHHHHhhcCeEEEEEecCcCc
Confidence 3333333 344579999999999864
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.48 E-value=5.2e-13 Score=117.91 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=60.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCH-HHHHHHHc-----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNK-KFLKTALR----- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~-~~l~~~~~----- 162 (265)
...+++|+||||+|+||++++++|+++|++|++++|+.++..+. .+..+.++.+|++|. +++.++++
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 34578999999999999999999999999999999998654332 234689999999997 77766554
Q ss_pred --CCCEEEEc
Q 024643 163 --GVRSIICP 170 (265)
Q Consensus 163 --~~d~vi~~ 170 (265)
.+|++|++
T Consensus 89 ~g~iD~lv~n 98 (311)
T 3o26_A 89 FGKLDILVNN 98 (311)
T ss_dssp HSSCCEEEEC
T ss_pred CCCCCEEEEC
Confidence 79999987
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=4.8e-13 Score=116.39 Aligned_cols=136 Identities=11% Similarity=0.091 Sum_probs=93.6
Q ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCc---chhhhc--CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~--~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+ |+||++++++|+++|++|++++|+.+ ..+++. ...+.++.+|++|++++.++++
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999 99999999999999999999999874 222221 1247889999999999888775
Q ss_pred CCCEEEEcCc---h------H---------------------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhH
Q 024643 163 GVRSIICPSE---G------F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~---~------~---------------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
++|++|++.+ . + +..++... ..++||++||..++...+....|.
T Consensus 86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~---- 161 (261)
T 2wyu_A 86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMA---- 161 (261)
T ss_dssp SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHH----
T ss_pred CCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHH----
Confidence 6899998721 0 0 01111111 125999999987765433222222
Q ss_pred HHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 162 -asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~ 194 (261)
T 2wyu_A 162 -IAKAALEASVRYLAYELGPKGVRVNAISAGPVR 194 (261)
T ss_dssp -HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCC
T ss_pred -HHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCc
Confidence 244444333 34469999999999874
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=2.8e-13 Score=117.29 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
.+++|+||||+|+||++++++|++ +|++|++++|+.++.... .+..+.++.+|++|.+++.++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999 999999999987654332 14568899999999999988776 7
Q ss_pred CCEEEEc
Q 024643 164 VRSIICP 170 (265)
Q Consensus 164 ~d~vi~~ 170 (265)
+|++|++
T Consensus 83 id~li~~ 89 (276)
T 1wma_A 83 LDVLVNN 89 (276)
T ss_dssp EEEEEEC
T ss_pred CCEEEEC
Confidence 8999987
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=5.1e-13 Score=115.84 Aligned_cols=133 Identities=14% Similarity=0.177 Sum_probs=95.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
+++++||||+|+||++++++|+++| +.|++++|+.++.+++ .+..+.++.+|++|.+++.++++ .+|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 5789999999999999999999985 7899999988665443 34578899999999999887775 6899
Q ss_pred EEEcCc-----h---------H-------------HH----HHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHH
Q 024643 167 IICPSE-----G---------F-------------IS----NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAE 215 (265)
Q Consensus 167 vi~~~~-----~---------~-------------~~----~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~ 215 (265)
+|++.+ . + +. ..+++.+ .+||++||...+...+....|. ..|.
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~-----asK~ 155 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYG-----SSKA 155 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHH-----HHHH
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHH-----HHHH
Confidence 997611 0 0 11 1134445 7999999988776544332222 2444
Q ss_pred HHHHHHH----h-CCCCEEEEeCCCcc
Q 024643 216 QDESMLM----A-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 216 ~~E~~l~----~-~gl~~tivRPg~l~ 237 (265)
..+.+.+ + .+++++.|+||++.
T Consensus 156 a~~~~~~~la~e~~~i~vn~v~PG~v~ 182 (254)
T 3kzv_A 156 ALNHFAMTLANEERQVKAIAVAPGIVD 182 (254)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECSSCC
T ss_pred HHHHHHHHHHhhccCcEEEEEeCCccc
Confidence 4443332 1 58999999999874
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.47 E-value=1.2e-12 Score=114.59 Aligned_cols=141 Identities=12% Similarity=0.139 Sum_probs=101.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHH-------cC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTAL-------RG 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~-------~~ 163 (265)
...+|+++||||+++||+++++.|+++|++|++.+|+.+..+.. .+.++..+.+|++|++++.+++ ..
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 46789999999999999999999999999999999987653321 3567899999999998887665 36
Q ss_pred CCEEEEcCc-----------h-H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HH
Q 024643 164 VRSIICPSE-----------G-F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 212 (265)
Q Consensus 164 ~d~vi~~~~-----------~-~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~ 212 (265)
+|++|++.+ . + ....+++.+ .+||++||.....+.+....|..++. ..
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~IVnisS~~~~~~~~~~~~Y~asKaav~~ 162 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR-GAIVNISSKTAVTGQGNTSGYCASKGAQLA 162 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTHHHHCCSSCHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEeehhhccCCCCchHHHHHHHHHHH
Confidence 899997621 0 0 111144444 79999999988665544333333221 22
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.+..++..+|++++.|.||++.
T Consensus 163 ltr~lA~ela~~gIrVN~V~PG~i~ 187 (258)
T 4gkb_A 163 LTREWAVALREHGVRVNAVIPAEVM 187 (258)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHhcccCeEEEEEecCCCC
Confidence 3344455566789999999999863
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.47 E-value=5.3e-13 Score=117.18 Aligned_cols=142 Identities=14% Similarity=0.107 Sum_probs=94.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC------------cchhh------hcCCccEEeeeCCCCHHHH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK------------RNAME------SFGTYVESMAGDASNKKFL 157 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~------------~~~~~------~~~~~v~~i~~D~~d~~~l 157 (265)
...+++++||||+|+||++++++|+++|++|++++|+. +..+. ..+..+.++.+|++|++++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 45678999999999999999999999999999999872 22111 1245788999999999998
Q ss_pred HHHHc-------CCCEEEEcCc----------h-H-------------HHHHHHh--CCCCEEEEecccccccCCCCc--
Q 024643 158 KTALR-------GVRSIICPSE----------G-F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGI-- 202 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~~~----------~-~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~-- 202 (265)
.++++ .+|++|++.+ . + +..++.. .+..+||++||...+......
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 166 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPG 166 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccccc
Confidence 87775 7899998721 0 0 1111211 234699999998765322100
Q ss_pred ---ccccchhHH-HHHHHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 203 ---QALMKGNAR-KLAEQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 203 ---~~~~~~~~~-~~k~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
.+......| ..|...+.+. ...|++++.|+||++.
T Consensus 167 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~ 212 (287)
T 3pxx_A 167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVN 212 (287)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBS
T ss_pred ccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 000111112 3554444433 3469999999999874
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.8e-12 Score=113.72 Aligned_cols=137 Identities=17% Similarity=0.200 Sum_probs=93.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-chhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++++.. +.+.. .+..+.++.+|++|++++.++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 345789999999999999999999999999999977652 22221 25578899999999999888775
Q ss_pred -CCCEEEEcCc-----h--------H-------------HHHHHH-h-CCCCEEEEecccccccC-CCCcccccchhHHH
Q 024643 163 -GVRSIICPSE-----G--------F-------------ISNAGS-L-KGVQHVILLSQLSVYRG-SGGIQALMKGNARK 212 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~~~aa~-~-~gv~r~V~iSS~~v~~~-~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+ . + +..++. . .+..+||++||...... .++...|. .
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~-----a 182 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYS-----A 182 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHH-----H
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHH-----H
Confidence 7899998721 0 0 111111 1 23569999998655433 22222222 2
Q ss_pred HHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
.|...+.+ +...|+++++|+||++.
T Consensus 183 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~ 214 (271)
T 3v2g_A 183 SKAALAGLTKGLARDLGPRGITVNIVHPGSTD 214 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhhhhCeEEEEEecCCCc
Confidence 44333333 34479999999999874
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-12 Score=115.59 Aligned_cols=135 Identities=16% Similarity=0.193 Sum_probs=95.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+++++||||+++||++++++|+++|++|++++|+.++.+++ .+..+.++.+|++|++++.++++ .+|+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3578999999999999999999999999999999998765543 34578999999999998877664 6799
Q ss_pred EEEcCc------h------------H-------------HHH----HHHhCCCCEEEEecccccccCCCCcccccchhHH
Q 024643 167 IICPSE------G------------F-------------ISN----AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR 211 (265)
Q Consensus 167 vi~~~~------~------------~-------------~~~----aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~ 211 (265)
+|++.+ . + +.. .+.+.+ .+||++||...+.+......|..
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~a---- 157 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTA---- 157 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSSSSSCHHHHH----
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CeEEEEecchhccCCCCCchhHH----
Confidence 997611 0 0 001 122333 69999999887765443323322
Q ss_pred HHHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 212 KLAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 212 ~~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.|...+.+.+. ..++++.|+||++.
T Consensus 158 -sKaa~~~l~~~la~e~~~~Irvn~v~PG~v~ 188 (281)
T 3zv4_A 158 -TKHAVVGLVRQMAFELAPHVRVNGVAPGGMN 188 (281)
T ss_dssp -HHHHHHHHHHHHHHHHTTTSEEEEEEECSSC
T ss_pred -HHHHHHHHHHHHHHHhcCCCEEEEEECCcCc
Confidence 34333333221 23999999999874
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1e-12 Score=115.17 Aligned_cols=136 Identities=13% Similarity=0.021 Sum_probs=93.5
Q ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCc---chhhhc--CCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMESF--GTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~~--~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+ |+||++++++|+++|++|++++|+.+ ..+++. ...+.++.+|++|++++.++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999 99999999999999999999999875 222221 1247889999999999887775
Q ss_pred CCCEEEEcCc---------hH---------------------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhH
Q 024643 163 GVRSIICPSE---------GF---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 ~~d~vi~~~~---------~~---------------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ .+ +..++... .-.+||++||.....+.+....|.
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~---- 159 (275)
T 2pd4_A 84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMG---- 159 (275)
T ss_dssp CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHH----
T ss_pred CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhH----
Confidence 6799998721 01 11112111 125999999987765433322222
Q ss_pred HHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 160 -asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 192 (275)
T 2pd4_A 160 -LAKAALESAVRYLAVDLGKHHIRVNALSAGPIR 192 (275)
T ss_dssp -HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred -HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccc
Confidence 23433333 334579999999999874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.7e-12 Score=113.53 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=93.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+||++++++|+++|++|++++++... .+.. .+..+.++++|++|++++.++++
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567899999999999999999999999999998876432 2211 34678999999999999887775
Q ss_pred -CCCEEEEcCc-----h--------H-------------HHHHHHh--CCCCEEEEecccccc-cCCCCcccccchhHHH
Q 024643 163 -GVRSIICPSE-----G--------F-------------ISNAGSL--KGVQHVILLSQLSVY-RGSGGIQALMKGNARK 212 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~~~aa~~--~gv~r~V~iSS~~v~-~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+ . + +..++.. ..-.+||++||.... ...+....|. .
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~-----a 169 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYS-----G 169 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHH-----H
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhH-----H
Confidence 6899997611 0 0 1111211 123599999997732 2222222222 2
Q ss_pred HHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|++++.|+||++.
T Consensus 170 sKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~ 201 (270)
T 3is3_A 170 SKGAVDSFVRIFSKDCGDKKITVNAVAPGGTV 201 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCcc
Confidence 3433333 334479999999999874
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-13 Score=116.65 Aligned_cols=130 Identities=9% Similarity=0.054 Sum_probs=91.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc---------CCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~---------~~d~vi~ 169 (265)
+++++||||+|+||++++++|+++|++|++++|+.++.. ....++.+|++|++++.++++ ++|++|+
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 578999999999999999999999999999999876543 235778899999998887664 7899998
Q ss_pred cCc---------hH------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 170 PSE---------GF------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 170 ~~~---------~~------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
+.+ .. +..++.. ....+||++||..++.+.+....|. ..|...+.+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----~sK~a~~~~ 153 (236)
T 1ooe_A 79 VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYG-----MAKAAVHHL 153 (236)
T ss_dssp CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHH-----HHHHHHHHH
T ss_pred CCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHH-----HHHHHHHHH
Confidence 721 10 0111111 1125999999988875443322222 245444443
Q ss_pred HH---------hCCCCEEEEeCCCcc
Q 024643 221 LM---------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l~---------~~gl~~tivRPg~l~ 237 (265)
.+ ..|+++++|+||++.
T Consensus 154 ~~~la~e~~~~~~gi~v~~v~Pg~v~ 179 (236)
T 1ooe_A 154 TSSLAAKDSGLPDNSAVLTIMPVTLD 179 (236)
T ss_dssp HHHHHSTTSSCCTTCEEEEEEESCBC
T ss_pred HHHHHHHhcccCCCeEEEEEecCccc
Confidence 32 356999999999863
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.4e-13 Score=116.66 Aligned_cols=136 Identities=17% Similarity=0.205 Sum_probs=93.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-EeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-VKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++|+||||+|+||++++++|+++|++|+++ .|+.+..+.. .+..+.++.+|++|.+++.++++
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 346789999999999999999999999999887 4555443322 24578899999999999887765
Q ss_pred CCCEEEEcCc-----h-H---------------------HHHH----HHh---CCCCEEEEecccccccCCC-Ccccccc
Q 024643 163 GVRSIICPSE-----G-F---------------------ISNA----GSL---KGVQHVILLSQLSVYRGSG-GIQALMK 207 (265)
Q Consensus 163 ~~d~vi~~~~-----~-~---------------------~~~a----a~~---~gv~r~V~iSS~~v~~~~~-~~~~~~~ 207 (265)
.+|++|++.+ . + +..+ +.+ .+.++||++||..++.... ....|.
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~- 182 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA- 182 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHH-
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhH-
Confidence 6899998711 1 0 0111 222 2456999999988765432 211222
Q ss_pred hhHHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 208 GNARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 183 ----asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 215 (272)
T 4e3z_A 183 ----ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIE 215 (272)
T ss_dssp ----HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred ----HHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCc
Confidence 244444433 34469999999999874
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=2.4e-13 Score=116.80 Aligned_cols=130 Identities=12% Similarity=0.097 Sum_probs=92.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc---------CCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---------GVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~---------~~d~vi 168 (265)
.+++++||||+|+||++++++|+++|++|++++|+.++.. ....++.+|++|++++.++++ ++|++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv 81 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAIL 81 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 4679999999999999999999999999999999876543 235778899999998887765 689999
Q ss_pred EcCc---------hH------------------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 169 CPSE---------GF------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 169 ~~~~---------~~------------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
++.+ .. +..++... .-++||++||..++...+....| ...|...+.
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y-----~asK~a~~~ 156 (241)
T 1dhr_A 82 CVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGY-----GMAKGAVHQ 156 (241)
T ss_dssp ECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHH-----HHHHHHHHH
T ss_pred EcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHH-----HHHHHHHHH
Confidence 8721 10 01111110 12599999998887544332222 235555554
Q ss_pred HHH---------hCCCCEEEEeCCCc
Q 024643 220 MLM---------ASGIPYTIIRTGVL 236 (265)
Q Consensus 220 ~l~---------~~gl~~tivRPg~l 236 (265)
+.+ ..|+++++|+||++
T Consensus 157 ~~~~la~e~~~~~~gi~v~~v~PG~v 182 (241)
T 1dhr_A 157 LCQSLAGKNSGMPSGAAAIAVLPVTL 182 (241)
T ss_dssp HHHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred HHHHHHHHhccCCCCeEEEEEecCcc
Confidence 432 35799999999986
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=7.7e-13 Score=125.62 Aligned_cols=140 Identities=19% Similarity=0.256 Sum_probs=100.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCcch---h----hh--cCCccEEeeeCCCCHHHHHHHHcCC-
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNA---M----ES--FGTYVESMAGDASNKKFLKTALRGV- 164 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~~~---~----~~--~~~~v~~i~~D~~d~~~l~~~~~~~- 164 (265)
-.++++|+||||+|+||.+++++|+++|++ |++++|+.... . ++ .+..++++.+|++|++++.++++.+
T Consensus 223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 345789999999999999999999999985 99999986421 1 11 2457889999999999999999765
Q ss_pred -----CEEEEcCc----h----------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHH
Q 024643 165 -----RSIICPSE----G----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKL 213 (265)
Q Consensus 165 -----d~vi~~~~----~----------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~ 213 (265)
|.|||+.+ . .+.+++...+.++||++||........+...|...+.+..
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~ 382 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLD 382 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHH
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHH
Confidence 89998721 0 0223355567899999999876554443334433332211
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+.++..|+++++|+||.+.
T Consensus 383 --~la~~~~~~gi~v~~i~pG~~~ 404 (486)
T 2fr1_A 383 --GLAQQRRSDGLPATAVAWGTWA 404 (486)
T ss_dssp --HHHHHHHHTTCCCEEEEECCBC
T ss_pred --HHHHHHHhcCCeEEEEECCeeC
Confidence 1223456689999999999764
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.9e-13 Score=116.15 Aligned_cols=142 Identities=14% Similarity=0.187 Sum_probs=94.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc---hhhh------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---AMES------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~---~~~~------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
...+++++||||+++||++++++|+++|++|++++|.... +++. .+..+.++.+|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999886432 2211 24568899999999999888775
Q ss_pred ---CCCEEEEcCc-----h--------H-------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 ---GVRSIICPSE-----G--------F-------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 ---~~d~vi~~~~-----~--------~-------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ . + +..++.. .+..+||++||...+........|..++.
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa 167 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAP 167 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHH
Confidence 6899998721 0 0 1111111 13469999999877654333323332221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|+||++.
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~ 195 (262)
T 3ksu_A 168 VEHYTRAASKELMKQQISVNAIAPGPMD 195 (262)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCc
Confidence 112222333344579999999999863
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.9e-12 Score=113.73 Aligned_cols=144 Identities=7% Similarity=-0.017 Sum_probs=96.5
Q ss_pred CCCCCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 94 FPEEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
.....+++++||||+| +||++++++|+++|++|++++|+.+..+.. ....+.++++|++|.+++.++++
T Consensus 25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 104 (296)
T 3k31_A 25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE 104 (296)
T ss_dssp CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence 3455678999999997 999999999999999999999987543221 12346889999999999887775
Q ss_pred ---CCCEEEEcCc---------hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccc
Q 024643 163 ---GVRSIICPSE---------GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 163 ---~~d~vi~~~~---------~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
.+|++|++.+ .+ +..++.. ....+||++||...+........|..
T Consensus 105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~a 184 (296)
T 3k31_A 105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGV 184 (296)
T ss_dssp HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHH
T ss_pred HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHH
Confidence 6799998721 00 1111111 12359999999887755433323322
Q ss_pred hhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
++.. ...+.....+...|+++++|+||++.
T Consensus 185 sKaal~~l~~~la~e~~~~gIrvn~v~PG~v~ 216 (296)
T 3k31_A 185 CKAALEASVKYLAVDLGKQQIRVNAISAGPVR 216 (296)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEECCCc
Confidence 2211 11122223344579999999999874
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-12 Score=111.79 Aligned_cols=136 Identities=13% Similarity=0.064 Sum_probs=94.5
Q ss_pred CCCCEEEEEcCCcH--HHHHHHHHHHHCCCeEEEEEeCCcchhhh------cC-CccEEeeeCCCCHHHHHHHHc-----
Q 024643 97 EARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAMES------FG-TYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~--IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~-~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
..+++++||||+|+ ||++++++|+++|++|++++|+....+.. .+ ..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 45789999999977 99999999999999999999986432221 12 268999999999998887764
Q ss_pred --CCCEEEEcCc--------h-H---------------------HHHHHHhC--CCCEEEEecccccccCCCCcccccch
Q 024643 163 --GVRSIICPSE--------G-F---------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 --~~d~vi~~~~--------~-~---------------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|.+|++.+ . + +..++... .-.+||++||...+.+.+....|..
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a- 163 (266)
T 3oig_A 85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGV- 163 (266)
T ss_dssp HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHH-
T ss_pred hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHH-
Confidence 6899998711 0 0 11112111 2359999999888765443323322
Q ss_pred hHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. .+...|+++++|+||++.
T Consensus 164 ----sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (266)
T 3oig_A 164 ----AKASLDASVKYLAADLGKENIRVNSISAGPIR 195 (266)
T ss_dssp ----HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred ----HHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 3333333 344578999999999874
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.44 E-value=7.9e-13 Score=113.81 Aligned_cols=131 Identities=13% Similarity=0.112 Sum_probs=92.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-----CCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-----GVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-----~~d~vi~~~ 171 (265)
.+++++||||+|+||++++++|++ .|++|++.+|+.+.. ...+.++.+|++|++++.++++ .+|++|++.
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA 78 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS----AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNA 78 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC----CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc----cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence 467899999999999999999999 789999999887522 2457899999999999998886 689999872
Q ss_pred c-----h--------H-------------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhHHHHHHHHHH----
Q 024643 172 E-----G--------F-------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES---- 219 (265)
Q Consensus 172 ~-----~--------~-------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~---- 219 (265)
+ . + +..++... .-.+||++||...+...+....|.. .|...+.
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~a-----sKaa~~~~~~~ 153 (244)
T 4e4y_A 79 GILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTL-----SKGAIAQMTKS 153 (244)
T ss_dssp CCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHH-----HHHHHHHHHHH
T ss_pred ccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHH-----HHHHHHHHHHH
Confidence 1 0 0 11111111 1148999999988765443333322 3433333
Q ss_pred ---HHHhCCCCEEEEeCCCcc
Q 024643 220 ---MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ---~l~~~gl~~tivRPg~l~ 237 (265)
.+...|+++++|+||++.
T Consensus 154 la~e~~~~gi~v~~v~PG~v~ 174 (244)
T 4e4y_A 154 LALDLAKYQIRVNTVCPGTVD 174 (244)
T ss_dssp HHHHHGGGTCEEEEEEESCBC
T ss_pred HHHHHHHcCeEEEEEecCccC
Confidence 334579999999999873
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.2e-12 Score=114.02 Aligned_cols=136 Identities=12% Similarity=0.082 Sum_probs=92.7
Q ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCc---chhhh--cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKR---NAMES--FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~---~~~~~--~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+ |+||++++++|+++|++|++++|+.. ..+++ ......++++|++|++++.++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 346789999999 99999999999999999999999872 22222 11235789999999999988775
Q ss_pred CCCEEEEcC---c------hHH----------------------HHHHHhC--CCCEEEEecccccccCCCCcccccchh
Q 024643 163 GVRSIICPS---E------GFI----------------------SNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 ~~d~vi~~~---~------~~~----------------------~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|++|++. . .+. ..++... ..++||++||...+.+.+....|.
T Consensus 87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~--- 163 (265)
T 1qsg_A 87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG--- 163 (265)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHH---
T ss_pred CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHH---
Confidence 679999872 1 010 0112111 125999999987765433222222
Q ss_pred HHHHHHHHHHH-------HHhCCCCEEEEeCCCcc
Q 024643 210 ARKLAEQDESM-------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~~~k~~~E~~-------l~~~gl~~tivRPg~l~ 237 (265)
..|...+.+ +...|+++++|+||++.
T Consensus 164 --~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~ 196 (265)
T 1qsg_A 164 --LAKASLEANVRYMANAMGPEGVRVNAISAGPIR 196 (265)
T ss_dssp --HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCC
T ss_pred --HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCc
Confidence 244444433 33468999999999873
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.7e-12 Score=124.05 Aligned_cols=136 Identities=20% Similarity=0.281 Sum_probs=97.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcc---hh----hh--cCCccEEeeeCCCCHHHHHHHHcC--C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AM----ES--FGTYVESMAGDASNKKFLKTALRG--V 164 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~---~~----~~--~~~~v~~i~~D~~d~~~l~~~~~~--~ 164 (265)
.++++|+||||+|+||.+++++|+++|+ +|++++|+... .. ++ .+..++++.+|++|.+++.++++. +
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~l 336 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPP 336 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCC
Confidence 4568999999999999999999999998 68999998632 11 12 245688999999999999999976 9
Q ss_pred CEEEEcCc----h---------H-------------HHHHHHhC-CCCEEEEecccccccCCCCcccccchhHHHHHHHH
Q 024643 165 RSIICPSE----G---------F-------------ISNAGSLK-GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQD 217 (265)
Q Consensus 165 d~vi~~~~----~---------~-------------~~~aa~~~-gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~ 217 (265)
|.|||+.+ . + +.+++... +.++||++||........+...|. ..|..+
T Consensus 337 d~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Ya-----aaKa~l 411 (511)
T 2z5l_A 337 NAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYA-----AANAAL 411 (511)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHH-----HHHHHH
T ss_pred cEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHH-----HHHHHH
Confidence 99998721 0 0 11122233 678999999987654433322222 244444
Q ss_pred HHH---HHhCCCCEEEEeCCCcc
Q 024643 218 ESM---LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~---l~~~gl~~tivRPg~l~ 237 (265)
+.+ ++..|+++++|+||.+.
T Consensus 412 d~la~~~~~~gi~v~sv~pG~~~ 434 (511)
T 2z5l_A 412 DALAERRRAAGLPATSVAWGLWG 434 (511)
T ss_dssp HHHHHHHHTTTCCCEEEEECCBC
T ss_pred HHHHHHHHHcCCcEEEEECCccc
Confidence 433 35689999999999874
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=115.28 Aligned_cols=141 Identities=14% Similarity=0.133 Sum_probs=98.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
++.+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+++|++|+++++++++ .+|
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999999999999999999999999998765543 45678899999999998877653 578
Q ss_pred EEEEcCc-----h--------H--HHH--------HHHh-----CCCCEEEEecccccccCCCCcccccchhH--HHHHH
Q 024643 166 SIICPSE-----G--------F--ISN--------AGSL-----KGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 215 (265)
Q Consensus 166 ~vi~~~~-----~--------~--~~~--------aa~~-----~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~ 215 (265)
++|++.+ . + +.+ .++. ..-++||++||.......+....|...+. ....+
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr 185 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFAR 185 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHH
Confidence 8887611 0 0 000 0111 11258999999887655443333322221 12223
Q ss_pred HHHHHHHhCCCCEEEEeCCCc
Q 024643 216 QDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 216 ~~E~~l~~~gl~~tivRPg~l 236 (265)
.+..++...|++++.|.||++
T Consensus 186 ~lA~Ela~~gIrVN~V~PG~i 206 (273)
T 4fgs_A 186 NWILDLKDRGIRINTLSPGPT 206 (273)
T ss_dssp HHHHHTTTSCEEEEEEEECSB
T ss_pred HHHHHhcccCeEEEEEeeCCC
Confidence 333445568999999999987
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=3e-12 Score=112.58 Aligned_cols=143 Identities=12% Similarity=0.108 Sum_probs=96.3
Q ss_pred CCCCCCEEEEEcCCcH--HHHHHHHHHHHCCCeEEEEEeCC--cchhhh--cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 95 PEEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDK--RNAMES--FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~--IG~~l~~~Ll~~G~~V~~~~R~~--~~~~~~--~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
....+++|+||||+|+ ||++++++|+++|++|++++|+. +..+++ ....+.++.+|++|.+++.++++
T Consensus 22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 3456789999999955 99999999999999999999987 333332 22358899999999999887775
Q ss_pred -CCCEEEEcCc---------hH----------------------HHHHH---HhCCCCEEEEecccccccCCCCcccccc
Q 024643 163 -GVRSIICPSE---------GF----------------------ISNAG---SLKGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 163 -~~d~vi~~~~---------~~----------------------~~~aa---~~~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
.+|++|++.+ .+ +..++ ......+||++||...+.+.+....|..
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 181 (280)
T 3nrc_A 102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGV 181 (280)
T ss_dssp SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHH
T ss_pred CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHH
Confidence 4699998711 00 00111 1123579999999888765443333322
Q ss_pred hhHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 208 GNAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
++.. ...+.....+...|+++++|+||++.
T Consensus 182 sKaal~~~~~~la~e~~~~gi~v~~v~PG~v~ 213 (280)
T 3nrc_A 182 AKASLEATVRYTALALGEDGIKVNAVSAGPIK 213 (280)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeecccc
Confidence 2211 11122223344579999999999874
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.42 E-value=2.9e-12 Score=111.62 Aligned_cols=142 Identities=9% Similarity=0.019 Sum_probs=98.1
Q ss_pred CCCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHH-----
Q 024643 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTAL----- 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~----- 161 (265)
...+|+++||||+| +||+++++.|+++|++|++.+|+.+..++. .+.++..+++|++|++++.+++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999886 899999999999999999999997654332 2347889999999998887665
Q ss_pred --cCCCEEEEcCc-----h------------H--HHH-----------HHH--hCCCCEEEEecccccccCCCCcccccc
Q 024643 162 --RGVRSIICPSE-----G------------F--ISN-----------AGS--LKGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 162 --~~~d~vi~~~~-----~------------~--~~~-----------aa~--~~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
..+|.+|++.+ . + ..+ .+. ..+-.+||++||.......+....|..
T Consensus 83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~a 162 (256)
T 4fs3_A 83 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGV 162 (256)
T ss_dssp HHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHH
T ss_pred HhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHH
Confidence 36899997611 0 0 000 011 123369999999887655443333322
Q ss_pred hhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 208 GNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
++. ....+.+..++..+|++++.|.||++.
T Consensus 163 sKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~ 194 (256)
T 4fs3_A 163 AKASLEANVKYLALDLGPDNIRVNAISAGPIR 194 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecCCCC
Confidence 221 122233444566689999999999863
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.42 E-value=1.6e-12 Score=112.07 Aligned_cols=141 Identities=16% Similarity=0.122 Sum_probs=93.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE-eCCcchhhh------cCCccEEeeeCCCCHHHHHHHHcC------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALV-KDKRNAMES------FGTYVESMAGDASNKKFLKTALRG------ 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~------ 163 (265)
..+++++||||+++||++++++|+++|++|+++. |+.++.++. .+..+.++.+|++|.+++.++++.
T Consensus 5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (255)
T 3icc_A 5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 84 (255)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence 4578999999999999999999999999999874 444433322 245688899999999888776642
Q ss_pred -------CCEEEEcCc-----h-------H--------------HHHHHHh--CCCCEEEEecccccccCCCCcccccch
Q 024643 164 -------VRSIICPSE-----G-------F--------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 164 -------~d~vi~~~~-----~-------~--------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
+|++|++.+ . . +..++.. .+..+||++||...+.+.+....|..+
T Consensus 85 ~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~as 164 (255)
T 3icc_A 85 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMT 164 (255)
T ss_dssp HHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred ccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHh
Confidence 899998721 0 0 1111111 123589999998887654433333222
Q ss_pred hHH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NAR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.. ...+.....+...|++++.|+||++.
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 195 (255)
T 3icc_A 165 KGAINTMTFTLAKQLGARGITVNAILPGFVK 195 (255)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHhcCeEEEEEEEeeec
Confidence 211 11122223344579999999999874
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.42 E-value=2.7e-12 Score=111.43 Aligned_cols=140 Identities=11% Similarity=0.032 Sum_probs=96.1
Q ss_pred CCCCCCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCcchhh---h--cCCccEEeeeCCCCHHHHHHHHc---
Q 024643 93 EFPEEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNAME---S--FGTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 93 ~~~~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~---~--~~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
......+++|+||||+ |+||++++++|+++|++|++++|+....+. + ....+.++.+|++|++++.++++
T Consensus 8 ~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 8 HMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp -CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHH
Confidence 3456678999999999 999999999999999999999998543221 1 23358899999999999988775
Q ss_pred ----CCCEEEEcCc---------h----H------------------HHHHHHhC--CCCEEEEecccccccCCCCcccc
Q 024643 163 ----GVRSIICPSE---------G----F------------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 163 ----~~d~vi~~~~---------~----~------------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~ 205 (265)
.+|++|++.+ . . +..++... ...+||++||...+.+.+....|
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 167 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTM 167 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHH
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccch
Confidence 5799998711 0 0 11111111 13589999998876554433233
Q ss_pred cchhHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 206 MKGNARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
.. .|...+. .+...|+++++|+||++.
T Consensus 168 ~a-----sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~ 201 (271)
T 3ek2_A 168 GL-----AKAALEASVRYLAVSLGAKGVRVNAISAGPIK 201 (271)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-
T ss_pred hH-----HHHHHHHHHHHHHHHHHhcCcEEEEEecCccc
Confidence 22 3333333 334579999999999874
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.41 E-value=2.4e-12 Score=112.03 Aligned_cols=136 Identities=13% Similarity=0.194 Sum_probs=91.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|+++++. .+..+.. .+..+.++.+|++|++++.++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999999999999999998554 4332221 24578899999999999888775
Q ss_pred CCCEEEEcCch--------------H-------------HHHHHHhC--CCCEEEEecccccc-cCCCCcccccchhHHH
Q 024643 163 GVRSIICPSEG--------------F-------------ISNAGSLK--GVQHVILLSQLSVY-RGSGGIQALMKGNARK 212 (265)
Q Consensus 163 ~~d~vi~~~~~--------------~-------------~~~aa~~~--gv~r~V~iSS~~v~-~~~~~~~~~~~~~~~~ 212 (265)
.+|++|++.+. + +..++... ...+||++||...+ ........|. .
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~-----a 160 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYA-----T 160 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHH-----H
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHH-----H
Confidence 68999986210 0 11112111 12489999998876 3333222222 2
Q ss_pred HHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.|...+.+.+. ..++++.|+||++.
T Consensus 161 sKaa~~~l~~~la~e~~~~I~vn~v~PG~v~ 191 (259)
T 3edm_A 161 SKGAVMTFTRGLAKEVGPKIRVNAVCPGMIS 191 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEECCCc
Confidence 44444333221 23999999999864
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.2e-12 Score=112.01 Aligned_cols=138 Identities=12% Similarity=0.127 Sum_probs=96.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
...+|+++||||+++||+++++.|+++|++|++.+|+.... ......+++|++|++++.++++ .+|++|
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----LPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----SCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----CCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 56789999999999999999999999999999999976432 1234578899999998876553 589999
Q ss_pred EcCc-------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCC-cccccchh--HHHH
Q 024643 169 CPSE-------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGG-IQALMKGN--ARKL 213 (265)
Q Consensus 169 ~~~~-------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~-~~~~~~~~--~~~~ 213 (265)
++.+ .+ ....+++.+-.+||++||.....+.+. ...|..++ ....
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l 163 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTY 163 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHH
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHH
Confidence 7611 10 111256677789999999877544321 11222111 1123
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+....++..+|++++.|.||++.
T Consensus 164 t~~lA~Ela~~gIrVN~V~PG~i~ 187 (261)
T 4h15_A 164 SKAMSKEVSPKGVRVVRVSPGWIE 187 (261)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHhhhhCeEEEEEeCCCcC
Confidence 334445566689999999999873
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=3.8e-12 Score=112.91 Aligned_cols=142 Identities=7% Similarity=-0.032 Sum_probs=95.3
Q ss_pred CCCCCEEEEEcCCcH--HHHHHHHHHHHCCCeEEEEEeCCcchh---hh--cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSD--IGQMVILSLIVKRTRIKALVKDKRNAM---ES--FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~--IG~~l~~~Ll~~G~~V~~~~R~~~~~~---~~--~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
...+++++||||+|+ ||++++++|+++|++|++++|+....+ ++ ....+.++.+|++|.+++.++++
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 456789999999977 999999999999999999999853222 11 12357899999999999887775
Q ss_pred -CCCEEEEcCc---------hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchh
Q 024643 163 -GVRSIICPSE---------GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 -~~d~vi~~~~---------~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|++|++.+ .+ +..++.. ....+||++||...+........|..++
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK 187 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAK 187 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHH
Confidence 6899998721 00 1111111 2246999999988776543332332222
Q ss_pred HH--HHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 AR--KLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~~--~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.. ...+.....+...|+++++|+||++.
T Consensus 188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 217 (293)
T 3grk_A 188 AALEASVKYLAVDLGPQNIRVNAISAGPIK 217 (293)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHhHhCCEEEEEecCCCc
Confidence 11 11122223344579999999999874
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.4e-12 Score=114.14 Aligned_cols=136 Identities=15% Similarity=0.117 Sum_probs=92.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-Ccchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-KRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+++++||||+|+||++++++|+++|++|++..++ .+..+.. .+..+.++.+|++|++++.++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456789999999999999999999999999988654 3333221 24578899999999999887775
Q ss_pred CCCEEEEcCc-----h--------H-------------HHHHH-Hh-CCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 163 GVRSIICPSE-----G--------F-------------ISNAG-SL-KGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 163 ~~d~vi~~~~-----~--------~-------------~~~aa-~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
.+|++|++.+ . + +..++ .. ....+||++||..+....+....|. ..|
T Consensus 105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~-----asK 179 (267)
T 3u5t_A 105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYA-----AAK 179 (267)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHH-----HHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHH-----HHH
Confidence 6899998721 0 0 01111 11 1235899999987765443332222 244
Q ss_pred HHHHHHH-------HhCCCCEEEEeCCCcc
Q 024643 215 EQDESML-------MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l-------~~~gl~~tivRPg~l~ 237 (265)
...+.+. ...|++++.|+||++.
T Consensus 180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~ 209 (267)
T 3u5t_A 180 AGVEAMTHVLSKELRGRDITVNAVAPGPTA 209 (267)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhhhhCCEEEEEEECCCc
Confidence 4444333 3468999999999873
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.1e-12 Score=117.81 Aligned_cols=136 Identities=14% Similarity=0.079 Sum_probs=94.0
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC----------Ccchhhh------cCCccEEeeeCCCCHHHHH
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD----------KRNAMES------FGTYVESMAGDASNKKFLK 158 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~----------~~~~~~~------~~~~v~~i~~D~~d~~~l~ 158 (265)
....+++++||||+|+||++++++|+++|++|++++|+ .+..+.. .+..+.++.+|++|++++.
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 102 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA 102 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence 34567899999999999999999999999999999987 3332221 2456888999999999988
Q ss_pred HHHc-------CCCEEEEcCc-----h--------H-------------HHHH----HHhC---C---CCEEEEeccccc
Q 024643 159 TALR-------GVRSIICPSE-----G--------F-------------ISNA----GSLK---G---VQHVILLSQLSV 195 (265)
Q Consensus 159 ~~~~-------~~d~vi~~~~-----~--------~-------------~~~a----a~~~---g---v~r~V~iSS~~v 195 (265)
++++ .+|++|++.+ . + +..+ +... + -.+||++||..+
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~ 182 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG 182 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence 7775 7899997621 0 0 0111 1111 1 259999999887
Q ss_pred ccCCCCcccccchhHHHHHHHHHH-------HHHhCCCCEEEEeCCC
Q 024643 196 YRGSGGIQALMKGNARKLAEQDES-------MLMASGIPYTIIRTGV 235 (265)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~k~~~E~-------~l~~~gl~~tivRPg~ 235 (265)
+........|.. .|..++. .+...|++++.|+||.
T Consensus 183 ~~~~~~~~~Y~a-----sKaal~~l~~~la~e~~~~gI~vn~v~PG~ 224 (322)
T 3qlj_A 183 LQGSVGQGNYSA-----AKAGIATLTLVGAAEMGRYGVTVNAIAPSA 224 (322)
T ss_dssp HHCBTTCHHHHH-----HHHHHHHHHHHHHHHHGGGTEEEEEEEECT
T ss_pred ccCCCCCccHHH-----HHHHHHHHHHHHHHHhcccCcEEEEecCCC
Confidence 655443323322 3433333 3344799999999993
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=112.22 Aligned_cols=131 Identities=14% Similarity=0.162 Sum_probs=90.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
..++++|+||||+|+||++++++|+++|++|++++|+.++.. ...+.+|++|.+++.++++ .+|++|
T Consensus 19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li 92 (251)
T 3orf_A 19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV 92 (251)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 444689999999999999999999999999999999986543 2457889999999887775 459999
Q ss_pred EcCc-----h-H---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 169 CPSE-----G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 169 ~~~~-----~-~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
++.+ . + +..++.. ..-.+||++||..++.+......| ...|...+.
T Consensus 93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y-----~~sKaa~~~ 167 (251)
T 3orf_A 93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAY-----GATKAATHH 167 (251)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHH-----HHHHHHHHH
T ss_pred ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchh-----HHHHHHHHH
Confidence 8721 0 0 1111111 112589999999887554332222 235555555
Q ss_pred HHH---------hCCCCEEEEeCCCcc
Q 024643 220 MLM---------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 220 ~l~---------~~gl~~tivRPg~l~ 237 (265)
+.+ ..++++++|+||++.
T Consensus 168 ~~~~la~e~~~~~~gi~v~~v~PG~v~ 194 (251)
T 3orf_A 168 IIKDLASENGGLPAGSTSLGILPVTLD 194 (251)
T ss_dssp HHHHHTSTTSSSCTTCEEEEEEESCBC
T ss_pred HHHHHHHHhcccCCCcEEEEEecCcCc
Confidence 432 358999999999863
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=3.3e-12 Score=110.64 Aligned_cols=130 Identities=14% Similarity=0.102 Sum_probs=86.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHH----HHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKT----ALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~----~~~~~d~vi~~ 170 (265)
++++||||+|+||++++++|+++|++|++++|+.++.+.. .+..+..+ |..+.+.+.+ .+..+|++|++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~n 79 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVSN 79 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 5799999999999999999999999999999987664432 13334443 6655543322 23479999976
Q ss_pred ---C-c--h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHH
Q 024643 171 ---S-E--G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDES 219 (265)
Q Consensus 171 ---~-~--~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~ 219 (265)
. . . + +...+++.+.++||++||...+...+....|.. .|...+.
T Consensus 80 Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~-----sK~a~~~ 154 (254)
T 1zmt_A 80 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTS-----ARAGACT 154 (254)
T ss_dssp CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHH-----HHHHHHH
T ss_pred CCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHH-----HHHHHHH
Confidence 1 1 0 0 111134556789999999887655433322222 3333333
Q ss_pred -------HHHhCCCCEEEEeCCCc
Q 024643 220 -------MLMASGIPYTIIRTGVL 236 (265)
Q Consensus 220 -------~l~~~gl~~tivRPg~l 236 (265)
.+...|+++++|+||++
T Consensus 155 ~~~~la~e~~~~gi~v~~v~PG~v 178 (254)
T 1zmt_A 155 LANALSKELGEYNIPVFAIGPNYL 178 (254)
T ss_dssp HHHHHHHHHGGGTCCEEEEEESSB
T ss_pred HHHHHHHHhhhcCcEEEEEecCcc
Confidence 34457999999999987
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=112.75 Aligned_cols=135 Identities=11% Similarity=0.086 Sum_probs=93.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHc----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
.+++++||||+|+||++++++|++ +|++|++++|+.++.++.. +..+.++.+|++|++++.++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 467899999999999999999999 8999999999976544321 4568899999999998877653
Q ss_pred -----CCC--EEEEcC----c--h-----H------------------HHHHH----HhC--CCCEEEEecccccccCCC
Q 024643 163 -----GVR--SIICPS----E--G-----F------------------ISNAG----SLK--GVQHVILLSQLSVYRGSG 200 (265)
Q Consensus 163 -----~~d--~vi~~~----~--~-----~------------------~~~aa----~~~--gv~r~V~iSS~~v~~~~~ 200 (265)
.+| ++|++. . . . +..++ ++. +..+||++||..++.+.+
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 164 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYK 164 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCT
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCC
Confidence 357 888761 1 0 1 01111 122 456899999998875443
Q ss_pred CcccccchhHHHHHHHHHHHHH----h-CCCCEEEEeCCCcc
Q 024643 201 GIQALMKGNARKLAEQDESMLM----A-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 201 ~~~~~~~~~~~~~k~~~E~~l~----~-~gl~~tivRPg~l~ 237 (265)
....|. ..|...+.+.+ + .+++++.|+||++.
T Consensus 165 ~~~~Y~-----asKaa~~~~~~~la~e~~~i~vn~v~PG~v~ 201 (259)
T 1oaa_A 165 GWGLYC-----AGKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp TCHHHH-----HHHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred CccHHH-----HHHHHHHHHHHHHHhhCCCceEEEecCCCcC
Confidence 322222 24544444432 2 34999999999873
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.3e-12 Score=112.49 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=83.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHH---HHH---cCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLK---TAL---RGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~---~~~---~~~d~vi~~ 170 (265)
.+++++||||+|+||++++++|++ |++|++++|+.++.+... ..++.++.+|+.|.+... +.+ ..+|++|++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~ 82 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHA 82 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEEC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEEC
Confidence 468999999999999999999987 999999999987665443 246889999998875522 122 368999987
Q ss_pred Cch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 171 SEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 171 ~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
.+. + +...+++.+ .+||++||..++.+.+....|. ..|...+.+
T Consensus 83 Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~-----asK~a~~~~ 156 (245)
T 3e9n_A 83 AAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYA-----ASKHALRGL 156 (245)
T ss_dssp C----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHH-----HHHHHHHHH
T ss_pred CCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHH-----HHHHHHHHH
Confidence 210 0 011133334 7999999998876544332332 244444333
Q ss_pred -------HHhCCCCEEEEeCCCcc
Q 024643 221 -------LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 -------l~~~gl~~tivRPg~l~ 237 (265)
+...|+++++|+||++.
T Consensus 157 ~~~la~e~~~~gi~v~~v~PG~v~ 180 (245)
T 3e9n_A 157 ADAFRKEEANNGIRVSTVSPGPTN 180 (245)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCC-
T ss_pred HHHHHHHhhhcCeEEEEEecCCcc
Confidence 33478999999999864
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.38 E-value=3.5e-12 Score=110.90 Aligned_cols=142 Identities=15% Similarity=0.203 Sum_probs=100.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhh--hcCCccEEeeeCCCCHHHHHHHHc--CCCEEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AME--SFGTYVESMAGDASNKKFLKTALR--GVRSIIC 169 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~--~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~ 169 (265)
++.+|+++||||+++||+++++.|+++|++|++.+|+... .+. ..+..+..+++|++|+++++++++ ++|++|+
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 4678999999999999999999999999999999998632 111 145678899999999988877664 5899887
Q ss_pred cCc-----h--------H-----------------HHHHHHhCC-CCEEEEecccccccCCCCcccccchhH--HHHHHH
Q 024643 170 PSE-----G--------F-----------------ISNAGSLKG-VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 216 (265)
Q Consensus 170 ~~~-----~--------~-----------------~~~aa~~~g-v~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~ 216 (265)
+.+ . + ....+.+.+ -.+||++||.......+....|..++. ....+.
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~ 165 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKL 165 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHH
Confidence 611 0 0 111144443 579999999987665443333332221 223344
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
+..++..+|++++.|.||++.
T Consensus 166 lA~Ela~~gIrVNaV~PG~i~ 186 (247)
T 4hp8_A 166 LANEWAAKGINVNAIAPGYIE 186 (247)
T ss_dssp HHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHhhcCeEEEEEeeCCCC
Confidence 455566789999999999873
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.35 E-value=5.1e-12 Score=109.84 Aligned_cols=139 Identities=9% Similarity=0.084 Sum_probs=95.9
Q ss_pred CCCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCcch-h----h---hcCCccEEeeeCCCCHHHHHHHHc---
Q 024643 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNA-M----E---SFGTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 96 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~----~---~~~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
...+++++||||+ ++||++++++|+++|++|++++|+.... + + ..+..+.++++|++|++++.++++
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHH
Confidence 3567899999999 8999999999999999999999886443 1 1 135678999999999999887765
Q ss_pred ----CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 ----GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 ----~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ . + +...+++.+..+||++||...+....+. .. .
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~--~ 173 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQ-EQ--T 173 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSS-CC--H
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCC-CC--C
Confidence 5699998721 0 0 1111355667899999998775443110 11 1
Q ss_pred hHHHHHHHHHHHHHh------CCCCEEEEeCCCcc
Q 024643 209 NARKLAEQDESMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k~~~E~~l~~------~gl~~tivRPg~l~ 237 (265)
.+...|...+.+.+. ..++++.|.||++.
T Consensus 174 ~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~ 208 (267)
T 3gdg_A 174 SYNVAKAGCIHMARSLANEWRDFARVNSISPGYID 208 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEE
T ss_pred cchHHHHHHHHHHHHHHHHhccCcEEEEEECCccc
Confidence 112244444443321 23899999999874
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-11 Score=107.72 Aligned_cols=135 Identities=11% Similarity=0.039 Sum_probs=92.1
Q ss_pred CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhh---cCCccEEeeeCCCCHHHHHHHHc--------
Q 024643 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKDKRNA-MES---FGTYVESMAGDASNKKFLKTALR-------- 162 (265)
Q Consensus 97 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---~~~~v~~i~~D~~d~~~l~~~~~-------- 162 (265)
..+++++|||| +|+||++++++|+++|++|++++|+.++. ++. .+..+.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA 84 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35689999999 99999999999999999999999987542 322 23467889999999999887775
Q ss_pred --CCCEEEEcC---c-------hH---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccc
Q 024643 163 --GVRSIICPS---E-------GF---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 163 --~~d~vi~~~---~-------~~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
.+|++|++. . .+ +..++.. ..-++||++||...+. .+....|.
T Consensus 85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~-~~~~~~Y~- 162 (269)
T 2h7i_A 85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA-MPAYNWMT- 162 (269)
T ss_dssp TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC-CTTTHHHH-
T ss_pred CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc-cCchHHHH-
Confidence 789999871 1 00 0111111 1125999999876532 11111111
Q ss_pred hhHHHHHHHHHH-------HHHhCCCCEEEEeCCCcc
Q 024643 208 GNARKLAEQDES-------MLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~~~~~k~~~E~-------~l~~~gl~~tivRPg~l~ 237 (265)
..|...+. .+...|+++++|+||++.
T Consensus 163 ----asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~ 195 (269)
T 2h7i_A 163 ----VAKSALESVNRFVAREAGKYGVRSNLVAAGPIR 195 (269)
T ss_dssp ----HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCC
T ss_pred ----HHHHHHHHHHHHHHHHhcccCcEEEEEecCccc
Confidence 24433333 334579999999999873
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-11 Score=116.92 Aligned_cols=138 Identities=20% Similarity=0.239 Sum_probs=97.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcc---hhhh------cCCccEEeeeCCCCHHHHHHHHcC----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AMES------FGTYVESMAGDASNKKFLKTALRG---- 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~~------~~~~v~~i~~D~~d~~~l~~~~~~---- 163 (265)
++++++||||+|+||.+++++|+++|+ +|++++|+... ..++ .+..+.++.+|++|++++.++++.
T Consensus 238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~ 317 (496)
T 3mje_A 238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED 317 (496)
T ss_dssp CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT
T ss_pred CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 348999999999999999999999998 78888886422 1111 355789999999999999998863
Q ss_pred --CCEEEEcCc----h-----------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 164 --VRSIICPSE----G-----------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 164 --~d~vi~~~~----~-----------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
+|.+|++.+ . .+..++...+.++||++||........+...|...+.+.
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~l-- 395 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYL-- 395 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHH--
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHH--
Confidence 688888711 0 022334556778999999988765544433333333211
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.++..|++++.|.||.+.
T Consensus 396 dala~~~~~~Gi~v~sV~pG~w~ 418 (496)
T 3mje_A 396 DALAEHRRSLGLTASSVAWGTWG 418 (496)
T ss_dssp HHHHHHHHHTTCCCEEEEECEES
T ss_pred HHHHHHHHhcCCeEEEEECCccc
Confidence 11223456689999999999653
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.32 E-value=1e-12 Score=113.25 Aligned_cols=137 Identities=13% Similarity=0.051 Sum_probs=84.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE-E--eCCcchhhhcC--CccEEeeeCCCCHHHHH-HH---HcCCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL-V--KDKRNAMESFG--TYVESMAGDASNKKFLK-TA---LRGVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~-~--R~~~~~~~~~~--~~v~~i~~D~~d~~~l~-~~---~~~~d~vi~ 169 (265)
+++++||||+|+||++++++|+++|++|+++ + |+.++.+.... .+.++. |..+.+.+. ++ +..+|++|+
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL--AEQKPERLVDATLQHGEAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEEEC--CCCCGGGHHHHHGGGSSCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCccc--CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3689999999999999999999999999999 5 98766543311 122322 444433332 22 236899998
Q ss_pred cC----c----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH--HHH
Q 024643 170 PS----E----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR--KLA 214 (265)
Q Consensus 170 ~~----~----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~~k 214 (265)
+. . .+ +...+++.+.++||++||...+.+.+....|..++.. ...
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~ 158 (244)
T 1zmo_A 79 NDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALV 158 (244)
T ss_dssp CCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHH
T ss_pred CCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHH
Confidence 71 1 10 1111445667899999998877554333233222211 111
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.....+...|+++++|+||++.
T Consensus 159 ~~la~e~~~~gi~v~~v~PG~v~ 181 (244)
T 1zmo_A 159 ESAAKTLSRDGILLYAIGPNFFN 181 (244)
T ss_dssp HHHHHHHGGGTEEEEEEEESSBC
T ss_pred HHHHHHHhhcCcEEEEEeeCCCc
Confidence 22222344579999999999874
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.32 E-value=1.5e-11 Score=115.77 Aligned_cols=142 Identities=16% Similarity=0.148 Sum_probs=96.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhhh-cCCccEEeeeCCCCHHHHHHHHc-------C-C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMES-FGTYVESMAGDASNKKFLKTALR-------G-V 164 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~-~~~~v~~i~~D~~d~~~l~~~~~-------~-~ 164 (265)
...+++++||||+|+||++++++|+++|++|++++|+... ..+. ...+++++.+|++|.+++.++++ + +
T Consensus 210 ~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 210 PLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCC
T ss_pred CCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCc
Confidence 4467899999999999999999999999999999987532 1111 12246789999999998887664 3 8
Q ss_pred CEEEEcCc----h---------H-------------HHHHHHh----CCCCEEEEecccccccCCCCcccccchhHH--H
Q 024643 165 RSIICPSE----G---------F-------------ISNAGSL----KGVQHVILLSQLSVYRGSGGIQALMKGNAR--K 212 (265)
Q Consensus 165 d~vi~~~~----~---------~-------------~~~aa~~----~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~--~ 212 (265)
|.+|++.+ . + +..++.. .+..+||++||........+...|..++.. .
T Consensus 290 d~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~ 369 (454)
T 3u0b_A 290 DILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIG 369 (454)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred eEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHH
Confidence 99998711 0 0 1111222 256799999998876555443333333221 1
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.....+...|+++++|.||++.
T Consensus 370 l~~~la~e~~~~gI~vn~v~PG~v~ 394 (454)
T 3u0b_A 370 LAEALAPVLADKGITINAVAPGFIE 394 (454)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECSBC
T ss_pred HHHHHHHHhhhcCcEEEEEEcCccc
Confidence 1222333345579999999999874
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-12 Score=114.27 Aligned_cols=135 Identities=10% Similarity=-0.005 Sum_probs=88.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe---------CCcchhhh----cCCccEEeeeCCCCHHHHHHHH-
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES----FGTYVESMAGDASNKKFLKTAL- 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R---------~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~- 161 (265)
...+++++||||+|+||++++++|+++|++|++.+| +.++.+.. ..... .+.+|+.|.+++.+++
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHHH
Confidence 345789999999999999999999999999999754 44433221 11111 2358999987665544
Q ss_pred ------cCCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccc
Q 024643 162 ------RGVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 162 ------~~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~ 205 (265)
..+|++|++.+ . + +...+++.+.++||++||........+...|
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y 164 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANY 164 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHH
Confidence 36899998721 0 0 1111445677899999997664433322222
Q ss_pred cchhHHHHHHHHHHH-------HHhCCCCEEEEeCCCc
Q 024643 206 MKGNARKLAEQDESM-------LMASGIPYTIIRTGVL 236 (265)
Q Consensus 206 ~~~~~~~~k~~~E~~-------l~~~gl~~tivRPg~l 236 (265)
. ..|...+.+ +...|+++++|+||++
T Consensus 165 ~-----aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 165 S-----AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 197 (319)
T ss_dssp H-----HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC
T ss_pred H-----HHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc
Confidence 2 244333332 3347999999999987
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.6e-11 Score=104.16 Aligned_cols=121 Identities=15% Similarity=0.131 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc---CCCEEEEcCc--
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR---GVRSIICPSE-- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~~-- 172 (265)
.+++++||||+|+||++++++|+++|++|++++|+.+ +|++|++++.++++ .+|++|++.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~ 70 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY 70 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence 4678999999999999999999999999999988764 89999999988775 6899998721
Q ss_pred -h-----------H-------------HHHHHHhC--CCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHH---
Q 024643 173 -G-----------F-------------ISNAGSLK--GVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLM--- 222 (265)
Q Consensus 173 -~-----------~-------------~~~aa~~~--gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~--- 222 (265)
. + +..++... .-.+||++||...+...+....|. ..|...+.+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~-----asK~a~~~~~~~la 145 (223)
T 3uce_A 71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKA-----AINAAIEATTKVLA 145 (223)
T ss_dssp CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHH-----HHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHH-----HHHHHHHHHHHHHH
Confidence 0 0 11111111 124899999988776544332222 24444444332
Q ss_pred -h-CCCCEEEEeCCCcc
Q 024643 223 -A-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 -~-~gl~~tivRPg~l~ 237 (265)
+ ..++++.|+||++.
T Consensus 146 ~e~~~i~vn~v~PG~v~ 162 (223)
T 3uce_A 146 KELAPIRVNAISPGLTK 162 (223)
T ss_dssp HHHTTSEEEEEEECSBC
T ss_pred HhhcCcEEEEEEeCCCc
Confidence 2 23999999999874
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.28 E-value=2e-11 Score=92.44 Aligned_cols=93 Identities=22% Similarity=0.167 Sum_probs=78.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch---
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG--- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~--- 173 (265)
++++|+|+|+ |++|+.+++.|.+.| ++|++++|++++.+.+...++.++.+|+.|.+.+.++++++|+||++.+.
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~ 82 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT 82 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence 4578999999 999999999999999 99999999998877666667889999999999999999999999988432
Q ss_pred -HHHHHHHhCCCCEEEEec
Q 024643 174 -FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 174 -~~~~aa~~~gv~r~V~iS 191 (265)
.+..++.+.|+++|.+.+
T Consensus 83 ~~~~~~~~~~g~~~~~~~~ 101 (118)
T 3ic5_A 83 PIIAKAAKAAGAHYFDLTE 101 (118)
T ss_dssp HHHHHHHHHTTCEEECCCS
T ss_pred HHHHHHHHHhCCCEEEecC
Confidence 245567788887765443
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.8e-11 Score=115.86 Aligned_cols=136 Identities=14% Similarity=0.121 Sum_probs=93.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEE-EeCC-------------cchhh----h--cCCccEEeeeCCCCH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTR-IKAL-VKDK-------------RNAME----S--FGTYVESMAGDASNK 154 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~-~R~~-------------~~~~~----~--~~~~v~~i~~D~~d~ 154 (265)
-.++++++||||+|+||.+++++|+++|++ |+++ +|+. +...+ + .+..+.++.+|++|.
T Consensus 248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~ 327 (525)
T 3qp9_A 248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDA 327 (525)
T ss_dssp SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSH
T ss_pred ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCH
Confidence 345689999999999999999999999987 5555 7773 22111 1 355789999999999
Q ss_pred HHHHHHHcC------CCEEEEcCc----h---------H-------------HHHHHHhC----C-CCEEEEeccccccc
Q 024643 155 KFLKTALRG------VRSIICPSE----G---------F-------------ISNAGSLK----G-VQHVILLSQLSVYR 197 (265)
Q Consensus 155 ~~l~~~~~~------~d~vi~~~~----~---------~-------------~~~aa~~~----g-v~r~V~iSS~~v~~ 197 (265)
+++.++++. +|.|||+.+ . + +..++... + ..+||++||.....
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 999998865 588998721 0 0 11112222 2 68999999988765
Q ss_pred CCCCcccccchhHHHHHHHHHHHH---HhCCCCEEEEeCCCc
Q 024643 198 GSGGIQALMKGNARKLAEQDESML---MASGIPYTIIRTGVL 236 (265)
Q Consensus 198 ~~~~~~~~~~~~~~~~k~~~E~~l---~~~gl~~tivRPg~l 236 (265)
...+...|. ..|..++.+. +..|++++.|.||.+
T Consensus 408 g~~g~~~Ya-----aaKa~l~~lA~~~~~~gi~v~sI~pG~~ 444 (525)
T 3qp9_A 408 GGAGQGAYA-----AGTAFLDALAGQHRADGPTVTSVAWSPW 444 (525)
T ss_dssp CCTTCHHHH-----HHHHHHHHHHTSCCSSCCEEEEEEECCB
T ss_pred CCCCCHHHH-----HHHHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 544332222 2444444443 347999999999987
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.4e-10 Score=113.05 Aligned_cols=142 Identities=11% Similarity=-0.002 Sum_probs=85.8
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe---------CCcchhhh----cCCccEEeeeCCCCHHHHHHHH
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK---------DKRNAMES----FGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R---------~~~~~~~~----~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
....+++++||||+++||++++++|+++|++|++++| +.++++.. ..... .+.+|+.|.+++.+++
T Consensus 15 ~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~ 93 (613)
T 3oml_A 15 LRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVI 93 (613)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHH
Confidence 4556889999999999999999999999999999987 44333222 11111 2347999988777766
Q ss_pred c-------CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCccc
Q 024643 162 R-------GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQA 204 (265)
Q Consensus 162 ~-------~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~ 204 (265)
+ .+|++|++.+ . + +...+++.+..+||++||............
T Consensus 94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~ 173 (613)
T 3oml_A 94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVN 173 (613)
T ss_dssp C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHH
T ss_pred HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChH
Confidence 5 5788887611 0 0 111245677789999999877654433323
Q ss_pred ccchhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 205 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
|..++. ....+.....+...|++++.|.||++.
T Consensus 174 Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t 208 (613)
T 3oml_A 174 YTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS 208 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC
Confidence 322221 111122233345579999999999753
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.4e-09 Score=98.40 Aligned_cols=72 Identities=18% Similarity=0.210 Sum_probs=58.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeCCcchh----------------h--hcCCccEEeeeCCCCHHHHHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM----------------E--SFGTYVESMAGDASNKKFLKT 159 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R~~~~~~----------------~--~~~~~v~~i~~D~~d~~~l~~ 159 (265)
++++|||||+++||+++++.|++ .|++|++++|+.+..+ . ..+..+..+.+|++|++++.+
T Consensus 61 gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~ 140 (422)
T 3s8m_A 61 PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQ 140 (422)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHH
Confidence 68999999999999999999999 9999999999764322 1 124567889999999988766
Q ss_pred HH--------cCCCEEEEc
Q 024643 160 AL--------RGVRSIICP 170 (265)
Q Consensus 160 ~~--------~~~d~vi~~ 170 (265)
++ ..+|++|++
T Consensus 141 ~v~~i~~~~~G~IDiLVNN 159 (422)
T 3s8m_A 141 VIELIKTEMGGQVDLVVYS 159 (422)
T ss_dssp HHHHHHHHSCSCEEEEEEC
T ss_pred HHHHHHHHcCCCCCEEEEc
Confidence 54 347888865
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.6e-09 Score=105.94 Aligned_cols=138 Identities=23% Similarity=0.333 Sum_probs=96.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHH-HCCC-eEEEEEeCCc---chhhh------cCCccEEeeeCCCCHHHHHHHHcC--
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLI-VKRT-RIKALVKDKR---NAMES------FGTYVESMAGDASNKKFLKTALRG-- 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll-~~G~-~V~~~~R~~~---~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~-- 163 (265)
.++++++||||+|+||+++++.|+ ++|+ +|++++|+.. ++++. .+..+.++.+|++|.+++.++++.
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 457899999999999999999999 7998 5999999842 22221 255788999999999999988864
Q ss_pred ----CCEEEEcCc----h-H-------H-----------HHHHHh--CCCCEEEEecccccccCCCCcccccchhHHHHH
Q 024643 164 ----VRSIICPSE----G-F-------I-----------SNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARKLA 214 (265)
Q Consensus 164 ----~d~vi~~~~----~-~-------~-----------~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k 214 (265)
+|.+|++.. . + + ....+. ... +||++||........+...|..++. ..
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-~iV~~SS~ag~~g~~g~~~YaAaka--~~ 684 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV-ALVLFSSVSGVLGSGGQGNYAAANS--FL 684 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-EEEEEEETHHHHTCSSCHHHHHHHH--HH
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-EEEEEccHHhcCCCCCCHHHHHHHH--HH
Confidence 578887611 0 0 0 111121 223 8999999987765554444443332 22
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....++++..|++++.|.||++.
T Consensus 685 ~alA~~~~~~Gi~v~sI~pG~v~ 707 (795)
T 3slk_A 685 DALAQQRQSRGLPTRSLAWGPWA 707 (795)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCS
T ss_pred HHHHHHHHHcCCeEEEEECCeEC
Confidence 33344566789999999999874
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.1e-08 Score=95.16 Aligned_cols=73 Identities=10% Similarity=0.145 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCcHHHHH--HHHHHHHCCCeEEEEEeCCcch------------hh------hcCCccEEeeeCCCCHHHH
Q 024643 98 ARDAVLVTDGDSDIGQM--VILSLIVKRTRIKALVKDKRNA------------ME------SFGTYVESMAGDASNKKFL 157 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~--l~~~Ll~~G~~V~~~~R~~~~~------------~~------~~~~~v~~i~~D~~d~~~l 157 (265)
.+++++||||+++||++ +++.|+++|++|++++|+.... +. ..+..+..+.+|++|.+++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v 138 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK 138 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence 46899999999999999 9999999999999999975431 11 1345688899999999888
Q ss_pred HHHHc-------CCCEEEEc
Q 024643 158 KTALR-------GVRSIICP 170 (265)
Q Consensus 158 ~~~~~-------~~d~vi~~ 170 (265)
.++++ .+|++|++
T Consensus 139 ~~~v~~i~~~~G~IDiLVnN 158 (418)
T 4eue_A 139 DKVIKYIKDEFGKIDLFVYS 158 (418)
T ss_dssp HHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEC
Confidence 77653 47888875
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-08 Score=93.81 Aligned_cols=73 Identities=16% Similarity=0.224 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeCCcchh----------------h--hcCCccEEeeeCCCCHHHHH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAM----------------E--SFGTYVESMAGDASNKKFLK 158 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R~~~~~~----------------~--~~~~~v~~i~~D~~d~~~l~ 158 (265)
.+++++||||+++||+++++.|++ .|++|++++|+.+... . ..+..+..+.+|++|++++.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 368999999999999999999999 9999999998754321 1 12456788999999998887
Q ss_pred HHHc-------CCCEEEEc
Q 024643 159 TALR-------GVRSIICP 170 (265)
Q Consensus 159 ~~~~-------~~d~vi~~ 170 (265)
++++ .+|++|++
T Consensus 126 ~~v~~i~~~~G~IDiLVNN 144 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYS 144 (405)
T ss_dssp HHHHHHHHHTSCEEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEEc
Confidence 6653 57888865
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.3e-09 Score=98.06 Aligned_cols=134 Identities=11% Similarity=0.050 Sum_probs=83.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEEeCC--cchh----hhcCCccEEeeeCCCCHHHHHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKDK--RNAM----ESFGTYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~~~R~~--~~~~----~~~~~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
.|+|+||||+||||++++..|+.+|+ +|+++++.. .+.. .+....+.++ +|+.+.+.+.++++++|
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~~~D 82 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFKDAD 82 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTTTCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhCCCC
Confidence 47899999999999999999999996 899998864 1111 1222122223 57766666778899999
Q ss_pred EEEEcCc-----h-----H----------HHHHHHhCC-CC-EEEEeccccc---c---cC---CCCcccccchhHHHHH
Q 024643 166 SIICPSE-----G-----F----------ISNAGSLKG-VQ-HVILLSQLSV---Y---RG---SGGIQALMKGNARKLA 214 (265)
Q Consensus 166 ~vi~~~~-----~-----~----------~~~aa~~~g-v~-r~V~iSS~~v---~---~~---~~~~~~~~~~~~~~~k 214 (265)
+|||+.. + + +.+++++.+ .+ +++++|+... + .. ..+.+.+.. .|
T Consensus 83 ~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~-----tk 157 (327)
T 1y7t_A 83 YALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAM-----TR 157 (327)
T ss_dssp EEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEEC-----CH
T ss_pred EEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheecc-----ch
Confidence 9998711 1 0 234455554 54 7787776431 1 11 111122222 33
Q ss_pred HHHHHH----HHhCCCCEEEEeCCCccC
Q 024643 215 EQDESM----LMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 215 ~~~E~~----l~~~gl~~tivRPg~l~~ 238 (265)
...|++ .+..|++++++||..+..
T Consensus 158 l~~er~~~~~a~~~g~~~~~vr~~~V~G 185 (327)
T 1y7t_A 158 LDHNRAKAQLAKKTGTGVDRIRRMTVWG 185 (327)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEECCEEEB
T ss_pred HHHHHHHHHHHHHhCcChhheeeeEEEc
Confidence 333333 344699999999987443
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=6.9e-09 Score=92.50 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=33.0
Q ss_pred CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 97 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
..+++++|||| +++||++++++|+++|++|++++|+
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP 44 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence 45689999999 8999999999999999999999875
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=1.5e-08 Score=89.37 Aligned_cols=36 Identities=14% Similarity=-0.026 Sum_probs=33.0
Q ss_pred CCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 97 EARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 97 ~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
..+++++||||+ ++||++++++|+++|++|++++|+
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~ 43 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV 43 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence 456899999999 999999999999999999999864
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.88 E-value=1.1e-08 Score=91.97 Aligned_cols=137 Identities=12% Similarity=0.074 Sum_probs=85.7
Q ss_pred CCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCC---------cchh---hh------cCCccEEeeeCCCCH--H-
Q 024643 99 RDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK---------RNAM---ES------FGTYVESMAGDASNK--K- 155 (265)
Q Consensus 99 ~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~---------~~~~---~~------~~~~v~~i~~D~~d~--~- 155 (265)
+++++||||++ +||++++++|+++|++|++.+|++ ++.. .. ....+.++.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 57899999975 999999999999999999877654 1111 11 112367888888776 5
Q ss_pred -----------------HHHHHH-------cCCCEEEEcCc------h-H---------------------HHHH----H
Q 024643 156 -----------------FLKTAL-------RGVRSIICPSE------G-F---------------------ISNA----G 179 (265)
Q Consensus 156 -----------------~l~~~~-------~~~d~vi~~~~------~-~---------------------~~~a----a 179 (265)
++.+++ ..+|++|++.+ . + +..+ +
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 555443 36899997621 0 0 0011 1
Q ss_pred HhCCCCEEEEecccccccCCCCcc-cccchhHH--HHHHHHHHHHHh-CCCCEEEEeCCCcc
Q 024643 180 SLKGVQHVILLSQLSVYRGSGGIQ-ALMKGNAR--KLAEQDESMLMA-SGIPYTIIRTGVLQ 237 (265)
Q Consensus 180 ~~~gv~r~V~iSS~~v~~~~~~~~-~~~~~~~~--~~k~~~E~~l~~-~gl~~tivRPg~l~ 237 (265)
++ + .+||++||.....+.+... .|..++.. ...+.....+.. .|++++.|.||++.
T Consensus 162 ~~-~-g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~ 221 (329)
T 3lt0_A 162 KP-Q-SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp EE-E-EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred hh-C-CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence 11 2 6999999988765544332 33222211 122233334455 79999999999863
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.86 E-value=1.3e-08 Score=79.34 Aligned_cols=96 Identities=9% Similarity=0.054 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch---
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG--- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~--- 173 (265)
++++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.......+.+|..|.+.+.++ ++++|.+|++.+.
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 83 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQ 83 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchH
Confidence 3567999998 9999999999999999999999988776655444567788999998888776 7889999988331
Q ss_pred ---HHHHHHHhCCCCEEEEecccc
Q 024643 174 ---FISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 174 ---~~~~aa~~~gv~r~V~iSS~~ 194 (265)
.....++..+++++|..++..
T Consensus 84 ~~~~~~~~~~~~~~~~ii~~~~~~ 107 (144)
T 2hmt_A 84 ASTLTTLLLKELDIPNIWVKAQNY 107 (144)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSH
T ss_pred HHHHHHHHHHHcCCCeEEEEeCCH
Confidence 133446677888877766543
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.86 E-value=1e-08 Score=99.72 Aligned_cols=140 Identities=11% Similarity=0.026 Sum_probs=90.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cch-hhh--cCCccEEeeeCC-CCHHHHH----HHHcCCCE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RNA-MES--FGTYVESMAGDA-SNKKFLK----TALRGVRS 166 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~~-~~~--~~~~v~~i~~D~-~d~~~l~----~~~~~~d~ 166 (265)
...+++++||||+++||++++++|+++|++|++.+|+. +.. +++ .+..+..+.+|+ .+.+.+. +.+..+|+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi 398 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI 398 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence 45678999999999999999999999999999987633 221 122 234466677888 5554432 23457999
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 214 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k 214 (265)
+|++.+ . + +...+++.+-.+||++||............|..++. ....
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt 478 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLS 478 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHH
Confidence 998711 0 0 111255566679999999877554433323322221 1222
Q ss_pred HHHHHHHHhCCCCEEEEeCCC
Q 024643 215 EQDESMLMASGIPYTIIRTGV 235 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~ 235 (265)
+.....+...|++++.|.||.
T Consensus 479 ~~la~El~~~gIrVn~v~PG~ 499 (604)
T 2et6_A 479 KTMAIEGAKNNIKVNIVAPHA 499 (604)
T ss_dssp HHHHHHHGGGTEEEEEEEECC
T ss_pred HHHHHHhCccCeEEEEEcCCC
Confidence 334445566899999999995
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.85 E-value=8.4e-09 Score=92.03 Aligned_cols=36 Identities=11% Similarity=-0.002 Sum_probs=32.7
Q ss_pred CCCCEEEEEcC--CcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 97 EARDAVLVTDG--DSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 97 ~~~~~vlVtGa--tG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
..+++++|||| +++||++++++|+++|++|++++|+
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~ 44 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP 44 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence 35689999999 8999999999999999999999864
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.4e-08 Score=79.74 Aligned_cols=92 Identities=16% Similarity=0.165 Sum_probs=72.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCchH---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEGF--- 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~~--- 174 (265)
+++|+|+|+ |.+|+.+++.|.++|++|+++++++++.+.+...++.++.+|.+|++.+.++ ++++|.+|.+.+..
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n 84 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFN 84 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHH
Confidence 568999999 9999999999999999999999999887766556788999999999998876 56899999874321
Q ss_pred --HHHHHHhCCCCEEEEec
Q 024643 175 --ISNAGSLKGVQHVILLS 191 (265)
Q Consensus 175 --~~~aa~~~gv~r~V~iS 191 (265)
....++..+..++|...
T Consensus 85 ~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 85 LKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp HHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHhCCceEEEEE
Confidence 23335555655655443
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.78 E-value=3e-08 Score=76.91 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=70.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEG--- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~--- 173 (265)
+|+|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+.. .++.++.+|..+.+.+.+. ++++|.+|++.+.
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~ 82 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEV 82 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchH
Confidence 478999998 999999999999999999999998876654432 2577888999998888765 6889999988332
Q ss_pred --HHHHHHHhCCCCEEEEec
Q 024643 174 --FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 174 --~~~~aa~~~gv~r~V~iS 191 (265)
.+...++..+.+++|..+
T Consensus 83 ~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 83 NLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp HHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEEe
Confidence 233445667777777544
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=98.78 E-value=4.3e-08 Score=95.27 Aligned_cols=138 Identities=12% Similarity=0.012 Sum_probs=84.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC---------cchhh----hcCCccEEeeeCCCCHH---HH-H-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---------RNAME----SFGTYVESMAGDASNKK---FL-K- 158 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~---------~~~~~----~~~~~v~~i~~D~~d~~---~l-~- 158 (265)
..+++++||||+++||+++++.|+++|++|++.+|+. +++++ +...+.+. ..|+.|.+ .+ .
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~-~~d~~d~~~~~~~v~~ 84 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA-VADYNNVLDGDKIVET 84 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE-EEECCCTTCHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE-EEEcCCHHHHHHHHHH
Confidence 4568999999999999999999999999999987754 33222 11111122 24555543 22 2
Q ss_pred --HHHcCCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCccccc
Q 024643 159 --TALRGVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 159 --~~~~~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
+.+..+|++|++.+ . + +...+++.+-.+||++||............|.
T Consensus 85 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~ 164 (604)
T 2et6_A 85 AVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA 164 (604)
T ss_dssp HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHH
Confidence 23457999998721 0 0 11125555667999999987755443332332
Q ss_pred chhH--HHHHHHHHHHHHhCCCCEEEEeCCC
Q 024643 207 KGNA--RKLAEQDESMLMASGIPYTIIRTGV 235 (265)
Q Consensus 207 ~~~~--~~~k~~~E~~l~~~gl~~tivRPg~ 235 (265)
.++. ....+.+..++..+|++++.|.||.
T Consensus 165 asKaal~~lt~~la~El~~~gIrVn~v~Pg~ 195 (604)
T 2et6_A 165 SAKSALLGFAETLAKEGAKYNIKANAIAPLA 195 (604)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEccCC
Confidence 2221 1222333444566899999999984
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.75 E-value=1.4e-07 Score=75.41 Aligned_cols=98 Identities=13% Similarity=0.105 Sum_probs=74.6
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPSE 172 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~ 172 (265)
....+++|+|+|+ |.+|+.+++.|.+.|++|++++|++++.+.+. ..++.++.+|..+.+.+.++ ++++|.||.+.+
T Consensus 15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 3455789999997 99999999999999999999999998877655 45677888999998888766 788999998733
Q ss_pred h-----HHHHHHHh-CCCCEEEEeccc
Q 024643 173 G-----FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 173 ~-----~~~~aa~~-~gv~r~V~iSS~ 193 (265)
. .....++. .+..++|...+.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~iv~~~~~ 120 (155)
T 2g1u_A 94 DDSTNFFISMNARYMFNVENVIARVYD 120 (155)
T ss_dssp CHHHHHHHHHHHHHTSCCSEEEEECSS
T ss_pred CcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 2 12333454 666677665543
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=98.73 E-value=3.7e-08 Score=105.03 Aligned_cols=135 Identities=13% Similarity=0.109 Sum_probs=90.0
Q ss_pred CCCCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEEE-eCCcchhh----h---c---CCccEEeeeCCCCHHHHHHHHc-
Q 024643 96 EEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAME----S---F---GTYVESMAGDASNKKFLKTALR- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~----~---~---~~~v~~i~~D~~d~~~l~~~~~- 162 (265)
...+++++||||+++ ||+++++.|+++|++|++++ |+.++... + . +..+.++.+|++|.+++.++++
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 355789999999998 99999999999999999984 66544322 1 1 4468889999999999887663
Q ss_pred ------------CCCEEEEcC-----c-hH-----------------------HHHHHHh------CCCCEEEEeccccc
Q 024643 163 ------------GVRSIICPS-----E-GF-----------------------ISNAGSL------KGVQHVILLSQLSV 195 (265)
Q Consensus 163 ------------~~d~vi~~~-----~-~~-----------------------~~~aa~~------~gv~r~V~iSS~~v 195 (265)
.+|++|++. . .+ +..+++. .+-.+||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 489999871 1 00 0111211 12259999999876
Q ss_pred ccCCCCcccccchhHHHHHHHHHHH----HHh---CCCCEEEEeCCCcc
Q 024643 196 YRGSGGIQALMKGNARKLAEQDESM----LMA---SGIPYTIIRTGVLQ 237 (265)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~k~~~E~~----l~~---~gl~~tivRPg~l~ 237 (265)
... .... +...|...+.+ +.. ..++++.|.||++.
T Consensus 832 ~~g--g~~a-----YaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~ 873 (1887)
T 2uv8_A 832 TFG--GDGM-----YSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR 873 (1887)
T ss_dssp CSS--CBTT-----HHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEE
T ss_pred ccC--CCch-----HHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 543 1111 22244444433 111 12899999999985
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=2.6e-08 Score=87.79 Aligned_cols=75 Identities=12% Similarity=0.115 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-----CccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++++||||+|++|++++..|++.|++|++++|+.++++++.. .++.++.+|++|.+++.++++.+|.+|+++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 457899999999999999999999999999999999766543311 246678899999999999999999999884
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.69 E-value=4.4e-08 Score=80.30 Aligned_cols=93 Identities=12% Similarity=0.088 Sum_probs=72.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH--HcCCCEEEEcCch
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA--LRGVRSIICPSEG 173 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~--~~~~d~vi~~~~~ 173 (265)
..+++|+|+|+ |.+|..+++.|.+. |++|+++++++++.+.+...++.++.+|.+|.+.+.++ ++++|.+|.+.+.
T Consensus 37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 44678999996 99999999999999 99999999999877666555678889999999988887 7899999987332
Q ss_pred -----HHHHHHHhCC-CCEEEEe
Q 024643 174 -----FISNAGSLKG-VQHVILL 190 (265)
Q Consensus 174 -----~~~~aa~~~g-v~r~V~i 190 (265)
.....++..+ ..++|..
T Consensus 116 ~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 116 HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEE
Confidence 1223345555 4455543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=98.68 E-value=3.8e-08 Score=104.76 Aligned_cols=74 Identities=14% Similarity=0.174 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEEE-eCCcchhh----h---c---CCccEEeeeCCCCHHHHHHHHc--
Q 024643 97 EARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALV-KDKRNAME----S---F---GTYVESMAGDASNKKFLKTALR-- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~~~-R~~~~~~~----~---~---~~~v~~i~~D~~d~~~l~~~~~-- 162 (265)
..+++++||||+|+ ||.++++.|+++|++|++++ |+.++... + . +..+.++.+|++|.+++.++++
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i 729 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI 729 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 45789999999999 99999999999999999986 55443321 1 1 4468889999999999887663
Q ss_pred ---------CCCEEEEc
Q 024643 163 ---------GVRSIICP 170 (265)
Q Consensus 163 ---------~~d~vi~~ 170 (265)
.+|++|++
T Consensus 730 ~~~~~~~G~~IDiLVnN 746 (1878)
T 2uv9_A 730 YDTKNGLGWDLDYVVPF 746 (1878)
T ss_dssp HCSSSSCCCCCSEEEEC
T ss_pred HHhhcccCCCCcEEEeC
Confidence 48999987
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.67 E-value=1.5e-07 Score=75.03 Aligned_cols=91 Identities=19% Similarity=0.294 Sum_probs=68.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-cc---hhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-RN---AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-~~---~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~ 173 (265)
+++|+|+|+ |.+|+.+++.|.+.|++|+++++++ ++ .......++.++.+|.+|++.+.++ ++++|.+|.+.+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDN 81 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCC
Confidence 467999997 9999999999999999999999984 33 2223355789999999999999887 8999999988332
Q ss_pred -----HHHHHHHhC-CCCEEEEe
Q 024643 174 -----FISNAGSLK-GVQHVILL 190 (265)
Q Consensus 174 -----~~~~aa~~~-gv~r~V~i 190 (265)
.....++.. +..++|..
T Consensus 82 d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 82 DADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp HHHHHHHHHHHHHHTSSSCEEEE
T ss_pred hHHHHHHHHHHHHHCCCCEEEEE
Confidence 122234443 55566543
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.4e-07 Score=72.84 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
.+++|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+...++.++.+|.++++.+.++ ++++|.+|.+.
T Consensus 6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 3568999998 9999999999999999999999999887766666789999999999988775 67899999873
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.58 E-value=3.3e-07 Score=83.50 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=72.2
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
..+..+|||+|.|| |++|+.+++.|. +.++|.+.+|+.++++.. ...+..+..|+.|.+++.++++++|+||.+.+.
T Consensus 11 ~~~g~~mkilvlGa-G~vG~~~~~~L~-~~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~ 87 (365)
T 3abi_A 11 HIEGRHMKVLILGA-GNIGRAIAWDLK-DEFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPG 87 (365)
T ss_dssp -----CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred cccCCccEEEEECC-CHHHHHHHHHHh-cCCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCC
Confidence 34556789999999 999999998886 468999999998777654 356788899999999999999999999988543
Q ss_pred H----HHHHHHhCCCCEEEEec
Q 024643 174 F----ISNAGSLKGVQHVILLS 191 (265)
Q Consensus 174 ~----~~~aa~~~gv~r~V~iS 191 (265)
+ +..+|.++|+ ++|=+|
T Consensus 88 ~~~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 88 FLGFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp GGHHHHHHHHHHHTC-EEEECC
T ss_pred cccchHHHHHHhcCc-ceEeee
Confidence 3 4555667775 666555
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.57 E-value=1.5e-08 Score=105.53 Aligned_cols=135 Identities=14% Similarity=0.125 Sum_probs=89.7
Q ss_pred CCCCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEE-EeCCcchhh----h------cCCccEEeeeCCCCHHHHHHHHc-
Q 024643 96 EEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKAL-VKDKRNAME----S------FGTYVESMAGDASNKKFLKTALR- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~~-~R~~~~~~~----~------~~~~v~~i~~D~~d~~~l~~~~~- 162 (265)
...+++++||||+++ ||+++++.|+++|++|+++ .|+.++..+ + .+..+.++.+|++|.+++.++++
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 345688999999998 9999999999999999998 465544321 1 13457889999999998887653
Q ss_pred ------------CCCEEEEcC----ch---------H----------------HHHHH------HhCCCCEEEEeccccc
Q 024643 163 ------------GVRSIICPS----EG---------F----------------ISNAG------SLKGVQHVILLSQLSV 195 (265)
Q Consensus 163 ------------~~d~vi~~~----~~---------~----------------~~~aa------~~~gv~r~V~iSS~~v 195 (265)
.+|++|++. .. . +..++ ++.+-.+||++||...
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 479999761 11 0 01112 1122358999999876
Q ss_pred ccCCCCcccccchhHHHHHHHHHHHH-H---h---CCCCEEEEeCCCcc
Q 024643 196 YRGSGGIQALMKGNARKLAEQDESML-M---A---SGIPYTIIRTGVLQ 237 (265)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~k~~~E~~l-~---~---~gl~~tivRPg~l~ 237 (265)
..+ .. ..+...|...+.+. + . ..++++.|.||++.
T Consensus 633 ~~G--g~-----saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~ 674 (1688)
T 2pff_A 633 TFG--GD-----GMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTR 674 (1688)
T ss_dssp TSS--CB-----TTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCC
T ss_pred ccC--Cc-----hHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCc
Confidence 543 11 12223666565552 1 1 22888999999875
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.7e-07 Score=76.93 Aligned_cols=91 Identities=20% Similarity=0.260 Sum_probs=71.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG---- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~---- 173 (265)
|+|+|+|+ |.+|+.+++.|.++|++|+++++++++.+.+. ..++.++.+|.+|++.+.++ ++++|.+|.+.+.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n 79 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDEVN 79 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcHHH
Confidence 68999997 99999999999999999999999998776543 23678999999999999887 7899999987332
Q ss_pred -HHHHHHHh-CCCCEEEEec
Q 024643 174 -FISNAGSL-KGVQHVILLS 191 (265)
Q Consensus 174 -~~~~aa~~-~gv~r~V~iS 191 (265)
.....++. .+..++|...
T Consensus 80 ~~~~~~a~~~~~~~~iia~~ 99 (218)
T 3l4b_C 80 LFIAQLVMKDFGVKRVVSLV 99 (218)
T ss_dssp HHHHHHHHHTSCCCEEEECC
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 12233444 6777776543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.47 E-value=8.4e-07 Score=98.16 Aligned_cols=135 Identities=14% Similarity=0.152 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCcchh-------hh--cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAM-------ES--FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~~~~-------~~--~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
.++++++||||+|+||+++++.|+++|++ |++++|+..+.+ ++ .+..+.++.+|++|.+++.++++
T Consensus 1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~ 1961 (2512)
T 2vz8_A 1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ 1961 (2512)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 35789999999999999999999999986 777888864321 11 24567888999999998877663
Q ss_pred --CCCEEEEcCc----h-H---------------------HHHHHHh--CCCCEEEEecccccccCCCCcccccchhHHH
Q 024643 163 --GVRSIICPSE----G-F---------------------ISNAGSL--KGVQHVILLSQLSVYRGSGGIQALMKGNARK 212 (265)
Q Consensus 163 --~~d~vi~~~~----~-~---------------------~~~aa~~--~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~ 212 (265)
.+|.+|++.+ . + +..++.. ....+||++||............| ..
T Consensus 1962 ~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y-----~a 2036 (2512)
T 2vz8_A 1962 LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANY-----GF 2036 (2512)
T ss_dssp HSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHH-----HH
T ss_pred cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHH-----HH
Confidence 5788887621 0 0 1111211 134799999998776544322222 23
Q ss_pred HHHHHHH---HHHhCCCCEEEEeCCCc
Q 024643 213 LAEQDES---MLMASGIPYTIIRTGVL 236 (265)
Q Consensus 213 ~k~~~E~---~l~~~gl~~tivRPg~l 236 (265)
.|...+. +.+..|++...+..|.+
T Consensus 2037 aKaal~~l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2037 ANSAMERICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHHHHHHHHTTSCCCEEEECCB
T ss_pred HHHHHHHHHHHHHHCCCcEEEEEccCc
Confidence 4444443 34568999999988864
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.43 E-value=5.8e-07 Score=83.19 Aligned_cols=88 Identities=16% Similarity=0.119 Sum_probs=69.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhhc-------CCccEEeeeCCCCHHHHHHHHcC--CCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESF-------GTYVESMAGDASNKKFLKTALRG--VRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~-------~~~v~~i~~D~~d~~~l~~~~~~--~d~ 166 (265)
+++|+|+|| |+||+.+++.|++.| .+|++.+|+.++++.+. +..+..+.+|++|.+++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 368999999 999999999999998 39999999987765432 13588999999999999999987 899
Q ss_pred EEEcCch----HHHHHHHhCCCCEE
Q 024643 167 IICPSEG----FISNAGSLKGVQHV 187 (265)
Q Consensus 167 vi~~~~~----~~~~aa~~~gv~r~ 187 (265)
||++.+. .+..++.++|+..+
T Consensus 80 Vin~ag~~~~~~v~~a~l~~g~~vv 104 (405)
T 4ina_A 80 VLNIALPYQDLTIMEACLRTGVPYL 104 (405)
T ss_dssp EEECSCGGGHHHHHHHHHHHTCCEE
T ss_pred EEECCCcccChHHHHHHHHhCCCEE
Confidence 9988432 24455667776533
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.37 E-value=1.1e-06 Score=82.57 Aligned_cols=73 Identities=10% Similarity=0.063 Sum_probs=62.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
+++|+|+| +|++|+.+++.|++.|++|++++|+.++++.+.. ..+..+.+|+.|.+++.++++++|+||++.+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 57899998 6999999999999999999999999877665432 2467888999999999999999999998843
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.34 E-value=8.4e-07 Score=75.46 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=69.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch---
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG--- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~--- 173 (265)
..++|+|+|+ |.+|+.+++.|.+.|+ |+++++++++.+.+. .++.++.+|.+|++.+.++ ++++|.+|.+.+.
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~ 84 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSE 84 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHH
Confidence 3578999998 9999999999999999 999999988776655 6789999999999999887 8999999987332
Q ss_pred --HHHHHHHhCCCC-EEEE
Q 024643 174 --FISNAGSLKGVQ-HVIL 189 (265)
Q Consensus 174 --~~~~aa~~~gv~-r~V~ 189 (265)
.....++..+.+ ++|.
T Consensus 85 n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 85 TIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHHHHHHHCCCCeEEE
Confidence 122334555554 5543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.3e-06 Score=82.45 Aligned_cols=76 Identities=16% Similarity=0.133 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
...+++|+|+|+ |++|+.++..|++. |++|++++|+.++++.+.. .++..+.+|+.|.+++.++++++|+||++.+
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp 97 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIP 97 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSC
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCc
Confidence 445678999998 99999999999998 7899999999877665432 3567788999999999999999999998843
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=6.6e-06 Score=76.34 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=64.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
+++|+|+|. |.+|+.+++.|.+.|++|+++++++++.+.+...++.++.+|.++++.+.++ +++++.+|.+.
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~ 76 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAI 76 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECC
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECC
Confidence 468999998 9999999999999999999999999887766666788999999999999887 78999999873
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.18 E-value=4.2e-06 Score=75.22 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcch--hhhcCCccE-EeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA--MESFGTYVE-SMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~--~~~~~~~v~-~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
+.|+|+||||+|++|..++..|+.+| ++|++++++++.. ..+...... .+.+ +.+..++.++++++|+||++.+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~al~gaDvVi~~ag 85 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAALTGMDLIIVPAG 85 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHHHTTCSEEEECCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHHcCCCCEEEEcCC
Confidence 45799999999999999999999999 8999999876521 112211111 1122 3345677889999999998711
Q ss_pred -----h-----H----------HHHHHHhCCCCEEEEecccc
Q 024643 173 -----G-----F----------ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 173 -----~-----~----------~~~aa~~~gv~r~V~iSS~~ 194 (265)
+ + +...+.+.+.+.+|+++|.-
T Consensus 86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNP 127 (326)
T 1smk_A 86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNP 127 (326)
T ss_dssp CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCc
Confidence 0 1 22335566777788887743
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.8e-05 Score=88.46 Aligned_cols=66 Identities=11% Similarity=0.117 Sum_probs=54.7
Q ss_pred CCCCCEEEEEcCCcH-HHHHHHHHHHHCCCeEEEEEeCCcc-----hhhh------cCCccEEeeeCCCCHHHHHHHH
Q 024643 96 EEARDAVLVTDGDSD-IGQMVILSLIVKRTRIKALVKDKRN-----AMES------FGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~-IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~------~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
...+++++||||+++ ||+++++.|+++|++|++.+|+.+. ++++ .+..+..+.+|++|++++.+++
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHH
Confidence 357899999999999 9999999999999999999998765 3222 1335778899999999988764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.14 E-value=5e-06 Score=68.57 Aligned_cols=96 Identities=16% Similarity=0.139 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHH---HHHHH--cCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL--RGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~---l~~~~--~~~d~vi~~~~ 172 (265)
++++|+|+||+|+||..+++.+...|++|++++|++++.+.....+... ..|..+.+. +.+.. .++|++|.+.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g 116 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEY-VGDSRSVDFADEILELTDGYGVDVVLNSLA 116 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSE-EEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence 4689999999999999999999999999999999887654433223322 246655433 33333 25899997743
Q ss_pred -hHHHHHHHh-CCCCEEEEecccc
Q 024643 173 -GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 173 -~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.....+.+. ..-.++|.+++..
T Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~~~ 140 (198)
T 1pqw_A 117 GEAIQRGVQILAPGGRFIELGKKD 140 (198)
T ss_dssp THHHHHHHHTEEEEEEEEECSCGG
T ss_pred hHHHHHHHHHhccCCEEEEEcCCC
Confidence 233333222 1224899988765
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.07 E-value=1.1e-05 Score=69.12 Aligned_cols=70 Identities=13% Similarity=0.208 Sum_probs=51.6
Q ss_pred CCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHH----H
Q 024643 98 ARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF----L 157 (265)
Q Consensus 98 ~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~----l 157 (265)
.+++|+|||| ||++|.++++.|+.+|++|+++.|...... ..+.++..+ |+...+. +
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-~~~~~~~~~--~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-EPHPNLSIR--EITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-CCCTTEEEE--ECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-cCCCCeEEE--EHhHHHHHHHHH
Confidence 4789999999 999999999999999999999999764211 112345554 4545443 4
Q ss_pred HHHHcCCCEEEEc
Q 024643 158 KTALRGVRSIICP 170 (265)
Q Consensus 158 ~~~~~~~d~vi~~ 170 (265)
.+.+.++|++|++
T Consensus 79 ~~~~~~~Dili~a 91 (232)
T 2gk4_A 79 QERVQDYQVLIHS 91 (232)
T ss_dssp HHHGGGCSEEEEC
T ss_pred HHhcCCCCEEEEc
Confidence 4455789999987
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.98 E-value=1.1e-05 Score=75.85 Aligned_cols=73 Identities=15% Similarity=0.204 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
..|+|+|.|+ |.+|+.+++.|.+.||+|+++++++++.+.+. ...+.++.||.++++.+.++ ++.+|.++.++
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t 76 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVT 76 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECC
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEc
Confidence 4689999999 99999999999999999999999998876553 23688999999999999887 58899998773
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=97.96 E-value=4.2e-06 Score=75.27 Aligned_cols=71 Identities=10% Similarity=0.011 Sum_probs=51.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-------eEEEEEeC----Ccchhh----hcCCccEEeeeCCCCHHHHHHHHcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-------RIKALVKD----KRNAME----SFGTYVESMAGDASNKKFLKTALRG 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-------~V~~~~R~----~~~~~~----~~~~~v~~i~~D~~d~~~l~~~~~~ 163 (265)
.|+|+||||+|++|+.++..|+.+|+ +|++++++ .++++. +...... +..|+.....+.+++++
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~-~~~~i~~~~~~~~al~~ 83 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFP-LLAGMTAHADPMTAFKD 83 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCT-TEEEEEEESSHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccc-ccCcEEEecCcHHHhCC
Confidence 47999999999999999999999885 89998887 433321 2221111 12355444557788999
Q ss_pred CCEEEEc
Q 024643 164 VRSIICP 170 (265)
Q Consensus 164 ~d~vi~~ 170 (265)
+|+||++
T Consensus 84 aD~Vi~~ 90 (329)
T 1b8p_A 84 ADVALLV 90 (329)
T ss_dssp CSEEEEC
T ss_pred CCEEEEe
Confidence 9999987
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.90 E-value=1.5e-05 Score=71.40 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=62.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
.++++|.|+ |.+|+.+++.|.++|+ |+++++++++.+ +...++.++.+|.+|++.+.++ ++++|.++.+.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~ 185 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDL 185 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECC
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcC
Confidence 568999998 9999999999999999 999999998877 6557789999999999999987 88999999873
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=6.8e-05 Score=63.93 Aligned_cols=69 Identities=9% Similarity=0.094 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC----------------CcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHH-
Q 024643 97 EARDAVLVTDG----------------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT- 159 (265)
Q Consensus 97 ~~~~~vlVtGa----------------tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~- 159 (265)
..+++|+|||| ||++|.++++.|+++|++|+++.++.. +. .+.+++ ..|+.+.+++.+
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--~~~g~~--~~dv~~~~~~~~~ 80 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--TPPFVK--RVDVMTALEMEAA 80 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--CCTTEE--EEECCSHHHHHHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--cCCCCe--EEccCcHHHHHHH
Confidence 46789999999 799999999999999999999988652 11 122333 468888765544
Q ss_pred ---HHcCCCEEEEc
Q 024643 160 ---ALRGVRSIICP 170 (265)
Q Consensus 160 ---~~~~~d~vi~~ 170 (265)
.+..+|++|++
T Consensus 81 v~~~~~~~Dili~~ 94 (226)
T 1u7z_A 81 VNASVQQQNIFIGC 94 (226)
T ss_dssp HHHHGGGCSEEEEC
T ss_pred HHHhcCCCCEEEEC
Confidence 34679999987
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.84 E-value=6.5e-05 Score=68.89 Aligned_cols=73 Identities=16% Similarity=0.171 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeCCcchh------------------hhcCCccEEeeeCCCCHHHHH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLI-VKRTRIKALVKDKRNAM------------------ESFGTYVESMAGDASNKKFLK 158 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll-~~G~~V~~~~R~~~~~~------------------~~~~~~v~~i~~D~~d~~~l~ 158 (265)
..|++|||||+.++|.+.+..|+ ..|..|+++.++.+..+ +..+.....+.+|+.|.+.+.
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~ 128 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA 128 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence 35899999999999999999998 67999999998654321 113557889999999998887
Q ss_pred HHHc-------CCCEEEEc
Q 024643 159 TALR-------GVRSIICP 170 (265)
Q Consensus 159 ~~~~-------~~d~vi~~ 170 (265)
++++ ++|.++|.
T Consensus 129 ~vi~~i~~~~G~IDiLVhS 147 (401)
T 4ggo_A 129 QVIEEAKKKGIKFDLIVYS 147 (401)
T ss_dssp HHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCEEEEe
Confidence 7663 58899886
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=97.82 E-value=3.3e-05 Score=68.87 Aligned_cols=91 Identities=10% Similarity=-0.001 Sum_probs=59.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEe--CCcchhh----h------cCCccEEeeeCCCCHHHHHHHHcCCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAME----S------FGTYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R--~~~~~~~----~------~~~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
|+|+||||+|++|+.++..|+.+|. ++.++++ +.++++. + .+..+++...| +++.++++++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCCC
Confidence 5899999999999999999999884 6777887 5433321 1 11122322211 23566799999
Q ss_pred EEEEcCc-----h---------------HHHHHHHhCCCCEEEEeccccc
Q 024643 166 SIICPSE-----G---------------FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 166 ~vi~~~~-----~---------------~~~~aa~~~gv~r~V~iSS~~v 195 (265)
+||++.. + .+.+++++.+ +++|+++|.-+
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv 125 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPV 125 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSH
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcH
Confidence 9998721 1 0333466667 87888887533
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=7.2e-05 Score=66.88 Aligned_cols=75 Identities=8% Similarity=0.090 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeC---CcchhhhcC-----CccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~---~~~~~~~~~-----~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
...+++++|+|+ |++|+.++..|++.|. +|+++.|+ .++++++.. ....+...++.+.+.+.+.+.++|.
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDi 229 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVI 229 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCE
Confidence 345789999998 8999999999999998 89999999 655554311 1234555678888888889999999
Q ss_pred EEEcC
Q 024643 167 IICPS 171 (265)
Q Consensus 167 vi~~~ 171 (265)
||.++
T Consensus 230 IINaT 234 (315)
T 3tnl_A 230 FTNAT 234 (315)
T ss_dssp EEECS
T ss_pred EEECc
Confidence 99884
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.78 E-value=3.7e-05 Score=69.08 Aligned_cols=97 Identities=13% Similarity=0.074 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHH----HHHHc-CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFL----KTALR-GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l----~~~~~-~~d~vi~~~ 171 (265)
.++++|+|+||+|.||..+++.+...|++|++++|++++.+.....+.. ...|+.+.+++ .+... ++|++|.+.
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE-VFIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC-EEEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc-eEEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 4578999999999999999999999999999999988765433222232 22466533223 33222 689999874
Q ss_pred c--hHHHHHHHh-CCCCEEEEecccc
Q 024643 172 E--GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~--~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ ..+..+.+. ..-.++|.+++..
T Consensus 247 g~~~~~~~~~~~l~~~G~iv~~g~~~ 272 (347)
T 2hcy_A 247 VSEAAIEASTRYVRANGTTVLVGMPA 272 (347)
T ss_dssp SCHHHHHHHTTSEEEEEEEEECCCCT
T ss_pred CcHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3 233333221 1124888888654
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=4.4e-06 Score=69.63 Aligned_cols=71 Identities=11% Similarity=0.040 Sum_probs=50.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-ccEEee-eCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMA-GDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~v~~i~-~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
|+|+|+||+|.+|+.+++.|++.|++|++++|++++.+.+... +. .+. .|+. .+++.++++++|.||++.+
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 5899999999999999999999999999999987765433211 10 000 1221 1235566788999998843
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.73 E-value=5e-05 Score=69.18 Aligned_cols=96 Identities=11% Similarity=0.051 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--h
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPSE--G 173 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~ 173 (265)
..+++|+|+|+ |.||+.+++.+...|++|++++|++++.+.... .+.. +..|..+.+.+.+.++++|++|.+.+ .
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~~~~~DvVi~~~g~~~ 241 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKSVQHADLLIGAVLVPG 241 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHHHHHCSEEEECCC---
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHHHhCCCEEEECCCCCc
Confidence 45689999999 999999999999999999999999876543311 1122 45677788889999999999998732 1
Q ss_pred -----H-HHHHHHh-CCCCEEEEecccc
Q 024643 174 -----F-ISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 174 -----~-~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ ..++... ..-..+|.+++..
T Consensus 242 ~~~~~li~~~~l~~mk~gg~iV~v~~~~ 269 (369)
T 2eez_A 242 AKAPKLVTRDMLSLMKEGAVIVDVAVDQ 269 (369)
T ss_dssp ----CCSCHHHHTTSCTTCEEEECC---
T ss_pred cccchhHHHHHHHhhcCCCEEEEEecCC
Confidence 0 1222221 1225788888754
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=4.8e-05 Score=67.81 Aligned_cols=99 Identities=17% Similarity=0.150 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH----HHHHHH-cCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK----FLKTAL-RGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~----~l~~~~-~~~d~vi~~ 170 (265)
..++++|+|+||+|+||..+++.+...|++|++++|+.++.+.....+.. ...|..+.+ .+.+.. .++|++|.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 221 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFD-AAFNYKTVNSLEEALKKASPDGYDCYFDN 221 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCc-EEEecCCHHHHHHHHHHHhCCCCeEEEEC
Confidence 34568999999999999999999999999999999987665443221222 234665522 222222 258999988
Q ss_pred Cch-HHHHHHHh-CCCCEEEEeccccc
Q 024643 171 SEG-FISNAGSL-KGVQHVILLSQLSV 195 (265)
Q Consensus 171 ~~~-~~~~aa~~-~gv~r~V~iSS~~v 195 (265)
.+. .+..+.+. ..-.++|.++....
T Consensus 222 ~g~~~~~~~~~~l~~~G~~v~~g~~~~ 248 (333)
T 1v3u_A 222 VGGEFLNTVLSQMKDFGKIAICGAISV 248 (333)
T ss_dssp SCHHHHHHHHTTEEEEEEEEECCCCC-
T ss_pred CChHHHHHHHHHHhcCCEEEEEecccc
Confidence 443 23333222 12248888876543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.68 E-value=4.9e-05 Score=67.57 Aligned_cols=97 Identities=9% Similarity=0.055 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHH---HHHHH--cCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL--RGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~---l~~~~--~~~d~vi~~~ 171 (265)
.++++|+|+||+|+||..+++.+...|++|++++|++++.+.....+... ..|..+.+. +.+.. .++|++|.+.
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ-VINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCE-EEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 45789999999999999999999999999999999876654332112221 245555433 33333 2589999874
Q ss_pred c-hHHHHHHHh-CCCCEEEEecccc
Q 024643 172 E-GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~-~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ ..+..+... ..-.++|.+++..
T Consensus 218 g~~~~~~~~~~l~~~G~iv~~g~~~ 242 (327)
T 1qor_A 218 GRDTWERSLDCLQRRGLMVSFGNSS 242 (327)
T ss_dssp CGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred chHHHHHHHHHhcCCCEEEEEecCC
Confidence 3 233333222 1224888888654
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00015 Score=64.38 Aligned_cols=89 Identities=9% Similarity=0.143 Sum_probs=59.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEe--CCcchhhh---------cCCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT--RIKALVK--DKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R--~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
|+|+||||+|++|+.++..|+.+|+ ++.++++ +.++++.. ....+++.. + + .++++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 6899999999999999999999885 6888877 55433211 012233332 1 2 456899999
Q ss_pred EEEcCc-----h-----H----------HHHHHHhCCCCEEEEeccccc
Q 024643 167 IICPSE-----G-----F----------ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 167 vi~~~~-----~-----~----------~~~aa~~~gv~r~V~iSS~~v 195 (265)
||++.+ + + +.+++++.+.+.+|+++|.-+
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv 122 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPV 122 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChH
Confidence 998711 1 0 233456677788888877533
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00012 Score=65.19 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHH---HHHHH-cCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKF---LKTAL-RGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~---l~~~~-~~~d~vi~~ 170 (265)
..++++|+|+||+|.||..+++.+...|++|++++|++++.+.. ...+... ..|..+.+. +.+.. .++|++|.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 225 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG-AIDYKNEDLAAGLKRECPKGIDVFFDN 225 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE-EEETTTSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE-EEECCCHHHHHHHHHhcCCCceEEEEC
Confidence 44578999999999999999999999999999999998776654 3333322 235544332 22222 368999987
Q ss_pred CchH-HHHHHHh-CCCCEEEEecccc
Q 024643 171 SEGF-ISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~~~-~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+.. +..+... ..-.++|.++...
T Consensus 226 ~g~~~~~~~~~~l~~~G~iv~~G~~~ 251 (336)
T 4b7c_A 226 VGGEILDTVLTRIAFKARIVLCGAIS 251 (336)
T ss_dssp SCHHHHHHHHTTEEEEEEEEECCCGG
T ss_pred CCcchHHHHHHHHhhCCEEEEEeecc
Confidence 4432 2233221 1225888888665
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00012 Score=66.10 Aligned_cols=96 Identities=16% Similarity=0.103 Sum_probs=63.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHHc--CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR--GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~~--~~d~vi~~~ 171 (265)
.++++|+|+||+|++|..+++.+...|++|++++|++++.+.....+... ..|..+.+ .+.+... ++|++|.+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHE-VFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCCE-EEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 45679999999999999999999999999999999887655432222222 24555533 3344443 689999884
Q ss_pred chH-HHHHHHh-CCCCEEEEeccc
Q 024643 172 EGF-ISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 172 ~~~-~~~aa~~-~gv~r~V~iSS~ 193 (265)
+.. +..+.+. ..-.++|.++..
T Consensus 248 G~~~~~~~~~~l~~~G~iv~~g~~ 271 (351)
T 1yb5_A 248 ANVNLSKDLSLLSHGGRVIVVGSR 271 (351)
T ss_dssp HHHHHHHHHHHEEEEEEEEECCCC
T ss_pred ChHHHHHHHHhccCCCEEEEEecC
Confidence 432 2222222 223588888753
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00013 Score=61.34 Aligned_cols=63 Identities=11% Similarity=0.159 Sum_probs=49.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|.|+| +|.+|+.+++.|.+.|++|++++|+.++.+.+...++... ++.++++++|+||.+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~--------~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSAAQVT--------FQEEAVSSPEVIFVA 90 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTTSEEE--------EHHHHTTSCSEEEEC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcee--------cHHHHHhCCCEEEEC
Confidence 57899999 6999999999999999999999999877665544344432 244567899999987
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00018 Score=64.76 Aligned_cols=97 Identities=15% Similarity=0.120 Sum_probs=63.2
Q ss_pred CCC--CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcC-CccEEeeeCCCCHH---HHHHHHc-CCCEEE
Q 024643 97 EAR--DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFG-TYVESMAGDASNKK---FLKTALR-GVRSII 168 (265)
Q Consensus 97 ~~~--~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~---~l~~~~~-~~d~vi 168 (265)
.++ ++|+|+||+|+||..+++.+...|+ +|++++++.++.+.... .+.. ...|..+.+ .+.+... ++|++|
T Consensus 157 ~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 157 TAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD-AAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS-EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-eEEecCchHHHHHHHHhcCCCCCEEE
Confidence 346 8999999999999999999999999 99999998766544321 2222 224665532 2333322 589999
Q ss_pred EcCch-HHHHHHHh-CCCCEEEEecccc
Q 024643 169 CPSEG-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 169 ~~~~~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+.+. .+..+.+. ..-.++|.++...
T Consensus 236 ~~~G~~~~~~~~~~l~~~G~iv~~G~~~ 263 (357)
T 2zb4_A 236 DNVGGNISDTVISQMNENSHIILCGQIS 263 (357)
T ss_dssp ESCCHHHHHHHHHTEEEEEEEEECCCGG
T ss_pred ECCCHHHHHHHHHHhccCcEEEEECCcc
Confidence 88543 23333222 1225888887654
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.50 E-value=9.8e-05 Score=65.81 Aligned_cols=98 Identities=10% Similarity=0.066 Sum_probs=63.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHH--cCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~--~~~d~vi~~ 170 (265)
..++.+|+|+||+|+||..+++.+...|++|++++|++++.+.....+.. ...|..+.+ .+.+.. .++|++|.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi~~ 221 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH-HTINYSTQDFAEVVREITGGKGVDVVYDS 221 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC-EEEECCCHHHHHHHHHHhCCCCCeEEEEC
Confidence 34578999999999999999999999999999999988665433211222 123555433 344443 368999987
Q ss_pred Cc-hHHHHHHHh-CCCCEEEEecccc
Q 024643 171 SE-GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~-~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+ ..+..+.+. ..-.++|.++...
T Consensus 222 ~g~~~~~~~~~~l~~~G~iv~~g~~~ 247 (333)
T 1wly_A 222 IGKDTLQKSLDCLRPRGMCAAYGHAS 247 (333)
T ss_dssp SCTTTHHHHHHTEEEEEEEEECCCTT
T ss_pred CcHHHHHHHHHhhccCCEEEEEecCC
Confidence 33 233333222 1224888887643
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00013 Score=65.65 Aligned_cols=97 Identities=12% Similarity=0.021 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHHc--CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTALR--GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~~--~~d~vi~~~ 171 (265)
.++.+|+|+||+|+||..+++.+...|++|++++|++++.+.....+.. ...|..+.+ .+.+... ++|++|.+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA-AGFNYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc-EEEecCChHHHHHHHHHhcCCCceEEEECC
Confidence 4568999999999999999999999999999999988765543211222 224555433 3334332 689999874
Q ss_pred c-hHHHHHHHh-CCCCEEEEecccc
Q 024643 172 E-GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~-~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ ..+..+.+. ..-.++|.++...
T Consensus 240 G~~~~~~~~~~l~~~G~iv~~G~~~ 264 (354)
T 2j8z_A 240 GGSYWEKNVNCLALDGRWVLYGLMG 264 (354)
T ss_dssp CGGGHHHHHHHEEEEEEEEECCCTT
T ss_pred CchHHHHHHHhccCCCEEEEEeccC
Confidence 3 233333222 2235888887643
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00014 Score=65.99 Aligned_cols=90 Identities=13% Similarity=0.062 Sum_probs=56.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC------CeEEEEEeCCc--c-hhhhcCC--c-cEEeeeCCCCHHHHHHHHcCCCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR------TRIKALVKDKR--N-AMESFGT--Y-VESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G------~~V~~~~R~~~--~-~~~~~~~--~-v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
+++|+|.||||.+|+++++.|++++ .+++++.+..+ + .....+. + ......|+ +.+ .+.++|+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~-~~~----~~~~~Dv 83 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPT-EAA----VLGGHDA 83 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEEC-CHH----HHTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccC-CHH----HhcCCCE
Confidence 4689999999999999999999887 37777765332 1 2211111 0 11111232 332 3569999
Q ss_pred EEEcCc----hHHHHHHHhCCCCEEEEeccccc
Q 024643 167 IICPSE----GFISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 167 vi~~~~----~~~~~aa~~~gv~r~V~iSS~~v 195 (265)
||++.+ ..+...+ ++|+ ++|-+|+..-
T Consensus 84 Vf~alg~~~s~~~~~~~-~~G~-~vIDlSa~~R 114 (352)
T 2nqt_A 84 VFLALPHGHSAVLAQQL-SPET-LIIDCGADFR 114 (352)
T ss_dssp EEECCTTSCCHHHHHHS-CTTS-EEEECSSTTT
T ss_pred EEECCCCcchHHHHHHH-hCCC-EEEEECCCcc
Confidence 998833 2244445 6674 7888888754
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00086 Score=62.88 Aligned_cols=94 Identities=17% Similarity=0.271 Sum_probs=73.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTYVESMAGDASNKKFLKTA-LRGVRSIICPSEG 173 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~ 173 (265)
.+.++|+|.|| |.+|..+++.| +++++|.++.++.++++.+. -++..++.+|.+|++-+.++ ++.+|+++.++..
T Consensus 233 ~~~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~~ 310 (461)
T 4g65_A 233 KPYRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVDVFIALTNE 310 (461)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCSEEEECCSC
T ss_pred ccccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhcEEEEcccC
Confidence 34578999998 99999999987 46799999999998876552 25688999999999988765 6889999987432
Q ss_pred -----HHHHHHHhCCCCEEEEecc
Q 024643 174 -----FISNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 174 -----~~~~aa~~~gv~r~V~iSS 192 (265)
+..-.|++.|++++|-.-.
T Consensus 311 De~Ni~~~llAk~~gv~kvIa~vn 334 (461)
T 4g65_A 311 DETNIMSAMLAKRMGAKKVMVLIQ 334 (461)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECS
T ss_pred cHHHHHHHHHHHHcCCcccccccc
Confidence 1233478899998876544
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0004 Score=62.66 Aligned_cols=88 Identities=17% Similarity=0.124 Sum_probs=53.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeC--CcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKD--KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~--~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
+++|+|.||+|.+|+.+++.|.+++| +++++... ..+...+.+ .++...|. |++ .++++|+||.+.+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~g--~~i~~~~~-~~~----~~~~~DvV~~a~g~ 78 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAE--SSLRVGDV-DSF----DFSSVGLAFFAAAA 78 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETT--EEEECEEG-GGC----CGGGCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccCC--cceEEecC-CHH----HhcCCCEEEEcCCc
Confidence 47899999999999999999997764 45555422 111111111 12111222 121 25789999998554
Q ss_pred H----HHHHHHhCCCCEEEEecccc
Q 024643 174 F----ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 174 ~----~~~aa~~~gv~r~V~iSS~~ 194 (265)
. ....+.++|++ +|.+|+..
T Consensus 79 ~~s~~~a~~~~~aG~k-vId~Sa~~ 102 (340)
T 2hjs_A 79 EVSRAHAERARAAGCS-VIDLSGAL 102 (340)
T ss_dssp HHHHHHHHHHHHTTCE-EEETTCTT
T ss_pred HHHHHHHHHHHHCCCE-EEEeCCCC
Confidence 3 23345567875 77777754
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00013 Score=65.24 Aligned_cols=97 Identities=12% Similarity=0.050 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCH----HHHHHHH-cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNK----KFLKTAL-RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~----~~l~~~~-~~~d~vi~~ 170 (265)
.++++|+|+||+|.||..+++.+...|++|++++|++++.+... ..+... ..|..+. +.+.+.. .++|++|.+
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD-AFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE-EEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce-EEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 45689999999999999999999999999999999887655443 223322 2355442 2333322 368999988
Q ss_pred CchH-HHHHHHh-CCCCEEEEecccc
Q 024643 171 SEGF-ISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~~~-~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+.. +..+... ..-.++|.++...
T Consensus 233 ~g~~~~~~~~~~l~~~G~~v~~G~~~ 258 (345)
T 2j3h_A 233 VGGKMLDAVLVNMNMHGRIAVCGMIS 258 (345)
T ss_dssp SCHHHHHHHHTTEEEEEEEEECCCGG
T ss_pred CCHHHHHHHHHHHhcCCEEEEEcccc
Confidence 5432 2222222 1224888887543
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00017 Score=64.60 Aligned_cols=97 Identities=10% Similarity=0.078 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHH--cCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~--~~~d~vi~~~ 171 (265)
.++++|+|+||+|.+|..+++.+...|++|++++|++++.+.....+... ..|..+.+ .+.+.. .++|++|.+.
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~~-~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADE-TVNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 45789999999999999999999999999999999887655432112222 24665532 344443 3689999873
Q ss_pred c-hHHHHHHHh-CCCCEEEEecccc
Q 024643 172 E-GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~-~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ .....+.+. ..-.++|.+++..
T Consensus 244 g~~~~~~~~~~l~~~G~~v~~g~~~ 268 (343)
T 2eih_A 244 GALYFEGVIKATANGGRIAIAGASS 268 (343)
T ss_dssp CSSSHHHHHHHEEEEEEEEESSCCC
T ss_pred CHHHHHHHHHhhccCCEEEEEecCC
Confidence 3 222222222 1224888888654
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00079 Score=57.91 Aligned_cols=87 Identities=9% Similarity=0.026 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC-------------------cchhhh------cCCc--cEEee
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAMES------FGTY--VESMA 148 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~-------------------~~~~~~------~~~~--v~~i~ 148 (265)
...++|+|.|+ |++|.++++.|+..|. +|++++++. .|++.+ ..+. ++.+.
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 107 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN 107 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEe
Confidence 34679999998 8999999999999996 899999886 443322 1223 44555
Q ss_pred eCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCC
Q 024643 149 GDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQ 185 (265)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~ 185 (265)
.++. .+.+.+.++++|.||.+.+. .+.+++.+.++.
T Consensus 108 ~~~~-~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p 148 (249)
T 1jw9_B 108 ALLD-DAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP 148 (249)
T ss_dssp SCCC-HHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred ccCC-HhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCC
Confidence 5564 45677788999999988443 244556666644
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00023 Score=64.09 Aligned_cols=98 Identities=13% Similarity=0.096 Sum_probs=63.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH-cCCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~-~~~d~vi~~~ 171 (265)
..++.+|+|+||+|.||..+++.+...|++|+++++++++.+.....+... ..|..+. +.+.+.. .++|++|.+.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 243 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR-GINYRSEDFAAVIKAETGQGVDIILDMI 243 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHHSSCEEEEEESC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE-EEeCCchHHHHHHHHHhCCCceEEEECC
Confidence 345789999999999999999999999999999999887765432212221 1344443 2333332 3689999874
Q ss_pred c-hHHHHHHHh-CCCCEEEEecccc
Q 024643 172 E-GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~-~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ ..+..+... ..-.+++.++...
T Consensus 244 g~~~~~~~~~~l~~~G~iv~~g~~~ 268 (353)
T 4dup_A 244 GAAYFERNIASLAKDGCLSIIAFLG 268 (353)
T ss_dssp CGGGHHHHHHTEEEEEEEEECCCTT
T ss_pred CHHHHHHHHHHhccCCEEEEEEecC
Confidence 3 333333322 2224788887653
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.0006 Score=60.36 Aligned_cols=66 Identities=8% Similarity=0.012 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.+|+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++.. ..+ +.++++++|+||.+.
T Consensus 20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~----~~~---~~~~~~~aDvvi~~v 85 (310)
T 3doj_A 20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASV----CES---PAEVIKKCKYTIAML 85 (310)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeE----cCC---HHHHHHhCCEEEEEc
Confidence 4689999987 99999999999999999999999998876654333332 123 445667789888773
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00072 Score=60.15 Aligned_cols=66 Identities=8% Similarity=-0.018 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..|+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++... . ++.++++++|+||.+.
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~----~---~~~e~~~~aDvVi~~v 95 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIH----E---QARAAARDADIVVSML 95 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEE----S---SHHHHHTTCSEEEECC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEee----C---CHHHHHhcCCEEEEEC
Confidence 4689999988 999999999999999999999999988776654444321 2 3456778899999773
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00058 Score=60.91 Aligned_cols=74 Identities=9% Similarity=0.062 Sum_probs=56.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeC---CcchhhhcC-----CccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKD---KRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~---~~~~~~~~~-----~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
..+++++|+|+ |++|+.++..|.+.|. +|+++.|+ .++++++.. ....+...++.+.+.+.+.+.++|.|
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 45789999998 9999999999999997 89999999 555544311 12334455666765566778889999
Q ss_pred EEcC
Q 024643 168 ICPS 171 (265)
Q Consensus 168 i~~~ 171 (265)
|.++
T Consensus 225 INaT 228 (312)
T 3t4e_A 225 TNGT 228 (312)
T ss_dssp EECS
T ss_pred EECC
Confidence 9884
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0004 Score=61.07 Aligned_cols=71 Identities=13% Similarity=0.195 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhc------CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF------GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~------~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
..+++++|+|+ |++|+.++..|.+.|. +|++++|+.++++++. ...+.+...++.+ +.+.+.++|.||.
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIAAADGVVN 200 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHHHSSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHhcCCEEEE
Confidence 45789999998 8999999999999998 7999999988765441 1123444445444 5567788999998
Q ss_pred cC
Q 024643 170 PS 171 (265)
Q Consensus 170 ~~ 171 (265)
++
T Consensus 201 aT 202 (283)
T 3jyo_A 201 AT 202 (283)
T ss_dssp CS
T ss_pred CC
Confidence 84
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00033 Score=61.12 Aligned_cols=65 Identities=6% Similarity=0.044 Sum_probs=49.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+|+|.|.|+||.+|..++..|.+.|++|++++|++++.+.+...++ +..+ ..++++++|+||.+.
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~-----~~~~---~~~~~~~aDvVi~av 75 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGI-----PLTD---GDGWIDEADVVVLAL 75 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTC-----CCCC---SSGGGGTCSEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCC-----CcCC---HHHHhcCCCEEEEcC
Confidence 4799999999999999999999999999999998876654432222 1222 234678899999883
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00021 Score=64.83 Aligned_cols=69 Identities=16% Similarity=0.100 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..++|+|+|+ |.+|+.+++.+...|++|++++|++++++.+. ...+.. +..+.+.+.+.+.++|.+|.+
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe---eeCCHHHHHHHHcCCCEEEEC
Confidence 3479999999 99999999999999999999999987765442 222222 223556777888899999987
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0011 Score=58.57 Aligned_cols=65 Identities=6% Similarity=-0.035 Sum_probs=45.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+.+||.++|- |.+|..+++.|++.||+|++.+|++++.+.+...+++.. ++..++++.+|+||.+
T Consensus 4 Ms~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G~~~~-------~s~~e~~~~~dvvi~~ 68 (297)
T 4gbj_A 4 MSEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLGATVV-------ENAIDAITPGGIVFSV 68 (297)
T ss_dssp CCCEEEEECC-STTHHHHHHHHHHTTCEEEEC-------CTTTTTTCEEC-------SSGGGGCCTTCEEEEC
T ss_pred CCCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCeEe-------CCHHHHHhcCCceeee
Confidence 3458999987 999999999999999999999999988877655555432 2345677889999977
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0012 Score=58.38 Aligned_cols=65 Identities=15% Similarity=0.106 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..++|.|.|. |.+|..+++.|++.|++|++.+|++++.+.+...++.. .. ++.++++++|+||.+
T Consensus 8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~---~~~e~~~~aDvVi~~ 72 (306)
T 3l6d_A 8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHL----CE---SVKAALSASPATIFV 72 (306)
T ss_dssp CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEE----CS---SHHHHHHHSSEEEEC
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee----cC---CHHHHHhcCCEEEEE
Confidence 4578999987 99999999999999999999999988766553323322 22 345667789999987
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00034 Score=61.39 Aligned_cols=97 Identities=12% Similarity=0.110 Sum_probs=62.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-H
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-F 174 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-~ 174 (265)
..++.+|+|+||+|.+|..+++.+...|++|+++++++++.+.....+... ..|..+.+.+.+.+.++|++|. .+. .
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~d~vid-~g~~~ 200 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE-AATYAEVPERAKAWGGLDLVLE-VRGKE 200 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE-EEEGGGHHHHHHHTTSEEEEEE-CSCTT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCCE-EEECCcchhHHHHhcCceEEEE-CCHHH
Confidence 346789999999999999999999999999999999887765432222322 2355551334444588999998 543 2
Q ss_pred HHHHHHh-CCCCEEEEecccc
Q 024643 175 ISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 175 ~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+..+.+. ..-.+++.++...
T Consensus 201 ~~~~~~~l~~~G~~v~~g~~~ 221 (302)
T 1iz0_A 201 VEESLGLLAHGGRLVYIGAAE 221 (302)
T ss_dssp HHHHHTTEEEEEEEEEC----
T ss_pred HHHHHHhhccCCEEEEEeCCC
Confidence 2222221 1124888877643
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00011 Score=64.45 Aligned_cols=73 Identities=7% Similarity=-0.063 Sum_probs=49.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEee--------eCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA--------GDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~--------~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|.|.|+ |.+|..++..|.+.|++|++++|++++.+.+...++.... .++.+.+.+.++++++|.||.+
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 81 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL 81 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence 479999998 9999999999999999999999988766544322222221 1112322233344588999887
Q ss_pred Cc
Q 024643 171 SE 172 (265)
Q Consensus 171 ~~ 172 (265)
.+
T Consensus 82 v~ 83 (316)
T 2ew2_A 82 TK 83 (316)
T ss_dssp SC
T ss_pred ec
Confidence 43
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00028 Score=62.72 Aligned_cols=98 Identities=9% Similarity=-0.027 Sum_probs=63.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHHc--CCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~~--~~d~vi~~ 170 (265)
..++.+|+|+||+|.+|...++.+...|++|+++++++++.+.....+... ..|..+. +.+.+... ++|++|.+
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 216 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE-TIDYSHEDVAKRVLELTDGKKCPVVYDG 216 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEeCCCccHHHHHHHHhCCCCceEEEEC
Confidence 345789999999999999999999999999999999887655432212221 2344443 33444443 68999987
Q ss_pred Cc-hHHHHHHHh-CCCCEEEEecccc
Q 024643 171 SE-GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~-~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+ ..+..+.+. ..-.++|.++...
T Consensus 217 ~g~~~~~~~~~~l~~~G~iv~~g~~~ 242 (325)
T 3jyn_A 217 VGQDTWLTSLDSVAPRGLVVSFGNAS 242 (325)
T ss_dssp SCGGGHHHHHTTEEEEEEEEECCCTT
T ss_pred CChHHHHHHHHHhcCCCEEEEEecCC
Confidence 33 333333222 2225888887654
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00098 Score=60.25 Aligned_cols=95 Identities=11% Similarity=0.074 Sum_probs=66.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--hH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE--GF 174 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~~ 174 (265)
++.+|+|+|+ |.||..+++.+...|++|+++++++++.+... .-+... ..|..+.+.+.+...++|++|.+.+ ..
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS-FLVSRDQEQMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE-EEETTCHHHHHHTTTCEEEEEECCSSCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce-EEeccCHHHHHHhhCCCCEEEECCCcHHH
Confidence 6789999997 99999999999999999999999887765432 223322 2467777777777778999997732 12
Q ss_pred HHHHHHh-CCCCEEEEecccc
Q 024643 175 ISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 175 ~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+..+... ..-.++|.+++..
T Consensus 265 ~~~~~~~l~~~G~iv~~g~~~ 285 (366)
T 1yqd_A 265 LLPLFGLLKSHGKLILVGAPE 285 (366)
T ss_dssp SHHHHHHEEEEEEEEECCCCS
T ss_pred HHHHHHHHhcCCEEEEEccCC
Confidence 2222221 2224888888643
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=60.42 Aligned_cols=71 Identities=11% Similarity=0.182 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
++++|+|.|+ |.+|+.+++.+.+.|++|++++ +..............+.+|+.|.+.+.++.+.+|+++.-
T Consensus 23 ~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~e 93 (403)
T 3k5i_A 23 NSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCDVVTAE 93 (403)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEES
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCCEEEEC
Confidence 4679999998 8999999999999999999999 653322222222245678999999999999999987753
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.25 E-value=5.5e-05 Score=59.28 Aligned_cols=67 Identities=6% Similarity=0.073 Sum_probs=50.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+++|+|+|+ |.+|+.+++.|...|++|++.+|+.++.+.+.. -++... +..+ +.++++++|+||.++
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~---~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEYV--LIND---IDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSC---HHHHHHTCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCceE--eecC---HHHHhcCCCEEEEeC
Confidence 689999997 999999999999999999999999877654311 112222 2333 456678999999873
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00046 Score=62.35 Aligned_cols=98 Identities=14% Similarity=0.107 Sum_probs=62.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH-cCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~-~~~d~vi~~~~ 172 (265)
.++.+|+|+||+|.+|..+++.+...|++|+++++++++.+.....+...+ .|..+. +.+.+.. .++|++|.+.+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~~-~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRP-INYKTEPVGTVLKQEYPEGVDVVYESVG 240 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCcEE-EecCChhHHHHHHHhcCCCCCEEEECCC
Confidence 457899999999999999999999999999999998766554322222221 243332 2232222 36899998743
Q ss_pred h-HHHHHHHh-CCCCEEEEeccccc
Q 024643 173 G-FISNAGSL-KGVQHVILLSQLSV 195 (265)
Q Consensus 173 ~-~~~~aa~~-~gv~r~V~iSS~~v 195 (265)
. ....+.+. ..-.++|.+++...
T Consensus 241 ~~~~~~~~~~l~~~G~iv~~g~~~~ 265 (362)
T 2c0c_A 241 GAMFDLAVDALATKGRLIVIGFISG 265 (362)
T ss_dssp THHHHHHHHHEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCC
Confidence 3 23333222 12248998887543
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00011 Score=64.02 Aligned_cols=69 Identities=14% Similarity=0.056 Sum_probs=48.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++++|+|+ |++|+.++..|++.|++|++..|+.++++.+. +....+...|+ +.+.+ .++|++|.++
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~~~--~~~DivVn~t 188 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DELEG--HEFDLIINAT 188 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGGTT--CCCSEEEECC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHhcc--CCCCEEEECC
Confidence 45789999999 78999999999999999999999987655432 11001112332 22222 5899999884
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0009 Score=60.22 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=54.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeC--CcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKD--KRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~--~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
+++|.|.||+|.+|+.+++.|.+++ .+++++... ..+...+.+..+.+ .|. |++ .++++|+||.+.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~--~~~-~~~----~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRV--QNV-EEF----DWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEE--EEG-GGC----CGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEE--ecC-ChH----HhcCCCEEEECCCc
Confidence 5789999999999999999999873 567777632 21111111112222 222 111 34689999998654
Q ss_pred H----HHHHHHhCCCCEEEEecccc
Q 024643 174 F----ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 174 ~----~~~aa~~~gv~r~V~iSS~~ 194 (265)
. ....+.++|+ ++|-.|+..
T Consensus 76 ~~s~~~a~~~~~~G~-~vId~s~~~ 99 (336)
T 2r00_A 76 ELSAKWAPIAAEAGV-VVIDNTSHF 99 (336)
T ss_dssp HHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred hHHHHHHHHHHHcCC-EEEEcCCcc
Confidence 3 2233456776 677777763
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00058 Score=60.76 Aligned_cols=98 Identities=14% Similarity=0.048 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH--cCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~--~~~d~vi~~ 170 (265)
..++.+|+|+||+|.+|...++.+...|++|+++++++++.+.....+... ..|..+. +.+.+.. .++|++|.+
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-~~~~~~~~~~~~~~~~~~~~g~D~vid~ 224 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAEY-LINASKEDILRQVLKFTNGKGVDASFDS 224 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EEeCCCchHHHHHHHHhCCCCceEEEEC
Confidence 346789999999999999999999999999999999887655432222221 2344332 3344443 368999977
Q ss_pred Cch-HHHHHHHh-CCCCEEEEecccc
Q 024643 171 SEG-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+. .+..+... ..-.++|.++...
T Consensus 225 ~g~~~~~~~~~~l~~~G~iv~~G~~~ 250 (334)
T 3qwb_A 225 VGKDTFEISLAALKRKGVFVSFGNAS 250 (334)
T ss_dssp CGGGGHHHHHHHEEEEEEEEECCCTT
T ss_pred CChHHHHHHHHHhccCCEEEEEcCCC
Confidence 433 23332222 2225888887643
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0043 Score=56.02 Aligned_cols=84 Identities=12% Similarity=0.095 Sum_probs=60.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc---hHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE---GFI 175 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~---~~~ 175 (265)
+++|+|+|+ |.+|+.+++.+.+.|++|++++.++........ -..+..|+.|.+.+.++++++|.++.... ...
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~~~~~d~v~~~~e~~~~~~ 77 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA--DEQIVAGFFDSERIEDLVKGSDVTTYDLEHIDVQT 77 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS--SEEEECCTTCHHHHHHHHHTCSEEEESCSCSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC--ceEEECCCCCHHHHHHHHhcCCEEEecccCCCHHH
Confidence 368999998 789999999999999999999876543211111 13567899999999988899999886522 123
Q ss_pred HHHHHhCCCC
Q 024643 176 SNAGSLKGVQ 185 (265)
Q Consensus 176 ~~aa~~~gv~ 185 (265)
.+.++..|+.
T Consensus 78 ~~~l~~~gi~ 87 (380)
T 3ax6_A 78 LKKLYNEGYK 87 (380)
T ss_dssp HHHHHHTTCE
T ss_pred HHHHHHCCCe
Confidence 3444556653
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00035 Score=61.27 Aligned_cols=69 Identities=9% Similarity=-0.011 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
..+++++|+|+ |++|+.++..|.+.|+ +|+++.|+.++++.+.. .+.. ...+++.++++++|.||.+++
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~~~-----~~~~~~~~~~~~aDiVInaTp 184 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NINK-----INLSHAESHLDEFDIIINTTP 184 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CCEE-----ECHHHHHHTGGGCSEEEECCC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hccc-----ccHhhHHHHhcCCCEEEECcc
Confidence 34688999998 8999999999999998 99999999988765532 2222 134567777889999998843
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00056 Score=61.11 Aligned_cols=98 Identities=17% Similarity=0.143 Sum_probs=63.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH--cCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~--~~~d~vi~~ 170 (265)
..++.+|+|+||+|.+|...++.+...|++|+++++++++.+.....+... ..|..+. +.+.+.. .++|++|.+
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~-~~~~~~~~~~~~~~~~~~~~g~Dvvid~ 220 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAY-VIDTSTAPLYETVMELTNGIGADAAIDS 220 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcE-EEeCCcccHHHHHHHHhCCCCCcEEEEC
Confidence 345789999999999999999999999999999999887765442222221 1344432 3344443 268999987
Q ss_pred Cch-HHHHHHHh-CCCCEEEEecccc
Q 024643 171 SEG-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+. ....++.. ..-.++|.++...
T Consensus 221 ~g~~~~~~~~~~l~~~G~iv~~G~~~ 246 (340)
T 3gms_A 221 IGGPDGNELAFSLRPNGHFLTIGLLS 246 (340)
T ss_dssp SCHHHHHHHHHTEEEEEEEEECCCTT
T ss_pred CCChhHHHHHHHhcCCCEEEEEeecC
Confidence 432 22333222 1225888887654
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00063 Score=60.10 Aligned_cols=70 Identities=16% Similarity=0.069 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++++|+|+ |++|+.++..|++.|+ +|++..|+.++++.+. +.... ++.+.+++.+.+.++|+||.++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~~~~~~aDivIn~t 212 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAETRLAEYDIIINTT 212 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHHHTGGGCSEEEECS
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHHhhhccCCEEEECC
Confidence 35689999998 8899999999999997 9999999987765542 21110 2223456777889999999883
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0018 Score=59.80 Aligned_cols=72 Identities=10% Similarity=0.071 Sum_probs=57.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........ -+.+..|+.|.+.+.++++++|+|+.-
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~a~~~D~V~~~ 103 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA--DRHLRAAYDDEAALAELAGLCEAVSTE 103 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS--SEEECCCTTCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC--CEEEECCcCCHHHHHHHHhcCCEEEEc
Confidence 456789999998 899999999999999999999876543222222 245668999999999999999998854
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00057 Score=61.73 Aligned_cols=91 Identities=7% Similarity=-0.050 Sum_probs=55.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhc--CCccEE-eeeCCCCHHHHHHHHcCCCEEEEcCchH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESF--GTYVES-MAGDASNKKFLKTALRGVRSIICPSEGF 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~--~~~v~~-i~~D~~d~~~l~~~~~~~d~vi~~~~~~ 174 (265)
+++|.|.||+|.+|+.+++.|.++. .+++++.+..+...... ...+.- ....+.+.+ + +.++|+||++.+..
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~~ 79 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPHG 79 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCcH
Confidence 4689999999999999999999876 48887766433211111 000000 011223332 2 47999999885432
Q ss_pred ----HHHHHHhCCCCEEEEecccc
Q 024643 175 ----ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 175 ----~~~aa~~~gv~r~V~iSS~~ 194 (265)
....+.++|+ ++|-+|+..
T Consensus 80 ~s~~~a~~~~~aG~-~VId~Sa~~ 102 (345)
T 2ozp_A 80 VFAREFDRYSALAP-VLVDLSADF 102 (345)
T ss_dssp HHHHTHHHHHTTCS-EEEECSSTT
T ss_pred HHHHHHHHHHHCCC-EEEEcCccc
Confidence 2223456675 588888753
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00043 Score=63.23 Aligned_cols=70 Identities=13% Similarity=0.020 Sum_probs=55.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|+|+|+ |.||+.+++.+...|++|++++|+.++.+.. .+..+ ..+..+.+.+.+.++++|+||.+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~---~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRI---HTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSS---EEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCee---EeccCCHHHHHHHHcCCCEEEEC
Confidence 45789999999 9999999999999999999999998765433 23222 22344567788888999999986
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00063 Score=59.33 Aligned_cols=64 Identities=9% Similarity=-0.027 Sum_probs=49.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++.. .. ++.++++++|+||.+.
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~---~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAER----AA---TPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEE----CS---SHHHHHHHCSEEEECC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cC---CHHHHHhcCCEEEEEc
Confidence 78999997 99999999999999999999999998876654333332 12 3445667788888773
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.003 Score=55.71 Aligned_cols=89 Identities=12% Similarity=0.088 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCC------------------cchhhh------cCC--ccEEee
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK------------------RNAMES------FGT--YVESMA 148 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~------------------~~~~~~------~~~--~v~~i~ 148 (265)
.....+|+|.|+ |++|.++++.|+..| -++++++.+. .|++.. ..+ .++.+.
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~ 111 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN 111 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence 456789999999 899999999999999 5888888765 222211 223 355566
Q ss_pred eCCCCHHHHHHHH-----------cCCCEEEEcCch-----HHHHHHHhCCCC
Q 024643 149 GDASNKKFLKTAL-----------RGVRSIICPSEG-----FISNAGSLKGVQ 185 (265)
Q Consensus 149 ~D~~d~~~l~~~~-----------~~~d~vi~~~~~-----~~~~aa~~~gv~ 185 (265)
.++++.+.+.+.+ +++|.||.+.+. .+.+++...++.
T Consensus 112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P 164 (292)
T 3h8v_A 112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT 164 (292)
T ss_dssp CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC
Confidence 6777766666655 689999987443 356667777764
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0019 Score=57.81 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=62.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH--cCCCEEEEcCch-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSEG- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~--~~~d~vi~~~~~- 173 (265)
++++|+||+|.||...++.+...|++|+++++++++.+.....+... ..|..+. +.+.+.. .++|++|.+.+.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~ 244 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH-VLNEKAPDFEATLREVMKAEQPRIFLDAVTGP 244 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE-EEETTSTTHHHHHHHHHHHHCCCEEEESSCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE-EEECCcHHHHHHHHHHhcCCCCcEEEECCCCh
Confidence 78999999999999999999999999999999887765442222221 1344332 2344443 379999987433
Q ss_pred HHHHHHHh-CCCCEEEEecccc
Q 024643 174 FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 174 ~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
....++.. ..-.++|.++...
T Consensus 245 ~~~~~~~~l~~~G~iv~~G~~~ 266 (349)
T 3pi7_A 245 LASAIFNAMPKRARWIIYGRLD 266 (349)
T ss_dssp HHHHHHHHSCTTCEEEECCCSC
T ss_pred hHHHHHhhhcCCCEEEEEeccC
Confidence 22333222 2336899988654
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0046 Score=56.18 Aligned_cols=72 Identities=11% Similarity=0.089 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..++++|+|.|+ |.+|+.+++.+.+.|++|++++.++....... .-..+..|+.|.+.+.++++.+|++..-
T Consensus 11 ~~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~--ad~~~~~~~~d~~~l~~~~~~~dvI~~~ 82 (389)
T 3q2o_A 11 ILPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQV--ADIEIVASYDDLKAIQHLAEISDVVTYE 82 (389)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTT--CSEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHh--CCceEecCcCCHHHHHHHHHhCCEeeec
Confidence 346789999998 88999999999999999999987654321111 1245568999999999999999988654
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0016 Score=62.18 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=59.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
++++|.|+ |.+|+.+++.|.+.|++|+++++++++.++.. .++.+|.+|++.++++ ++.+|.++.+.
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~ 416 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTT 416 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECC
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEEC
Confidence 88999999 99999999999999999999999998776432 7899999999998765 47899999873
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0023 Score=55.08 Aligned_cols=93 Identities=11% Similarity=0.123 Sum_probs=59.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-----cCCCEEEEcC--
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICPS-- 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-----~~~d~vi~~~-- 171 (265)
|+|+|.|++|.+|+.+++.+.+. +++++++.......+.+...... +..|++.++.+.+.+ .+++.|+.++
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGNTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTTCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccCCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 58999999999999999999876 89998776544433333222333 567888887665433 3677777552
Q ss_pred -ch---HHHHHHHhC-CCCEEEEecccc
Q 024643 172 -EG---FISNAGSLK-GVQHVILLSQLS 194 (265)
Q Consensus 172 -~~---~~~~aa~~~-gv~r~V~iSS~~ 194 (265)
.. .+.+++++. ++ .+++.+..+
T Consensus 80 ~~e~~~~l~~aa~~~~~~-~vv~a~N~s 106 (245)
T 1p9l_A 80 TAERFQQVESWLVAKPNT-SVLIAPNFA 106 (245)
T ss_dssp CHHHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred CHHHHHHHHHHHHhCCCC-CEEEECCcc
Confidence 21 133344444 44 556665543
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0041 Score=56.39 Aligned_cols=68 Identities=7% Similarity=-0.096 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+|+|.|+|. |.+|..++..|++.|++|++.+|++++.+.+...++. ...+.+++.+..+..|+||.+
T Consensus 21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~----~~~s~~e~~~~a~~~DvVi~~ 88 (358)
T 4e21_A 21 QSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIA----GARSIEEFCAKLVKPRVVWLM 88 (358)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCB----CCSSHHHHHHHSCSSCEEEEC
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCE----EeCCHHHHHhcCCCCCEEEEe
Confidence 3579999996 9999999999999999999999999887766544432 123444433333344999987
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.001 Score=59.43 Aligned_cols=96 Identities=10% Similarity=0.072 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHHcCCCEEEEcCc-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALRGVRSIICPSE- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~~~~d~vi~~~~- 172 (265)
.++++|+|+|| |.+|..+++.+...|++|++++|++++.+.....+... ..|..+. +.+.+...++|++|.+.+
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL-VVNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE-EECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCE-EecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 45789999999 77999999999999999999999887655443223322 2465542 234443468999998733
Q ss_pred -hHHHHHHHh-CCCCEEEEecccc
Q 024643 173 -GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 173 -~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
..+..+.+. ..-.++|.++...
T Consensus 241 ~~~~~~~~~~l~~~G~~v~~g~~~ 264 (339)
T 1rjw_A 241 KPAFQSAYNSIRRGGACVLVGLPP 264 (339)
T ss_dssp HHHHHHHHHHEEEEEEEEECCCCS
T ss_pred HHHHHHHHHHhhcCCEEEEecccC
Confidence 333333222 2224888887643
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0012 Score=58.02 Aligned_cols=69 Identities=14% Similarity=0.056 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|+|.|+ |.||+.+++.|...|++|++.+|+.++.+.....+++.+ +.+++.++++++|+|+.+
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-----~~~~l~~~l~~aDvVi~~ 220 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMGMEPF-----HISKAAQELRDVDVCINT 220 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTSEEE-----EGGGHHHHTTTCSEEEEC
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeec-----ChhhHHHHhcCCCEEEEC
Confidence 467889999997 999999999999999999999998766443322234432 123567788999999977
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.001 Score=59.44 Aligned_cols=98 Identities=16% Similarity=0.133 Sum_probs=60.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCcc-EEeeeCCCCH-HHHHHHHc--CCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDASNK-KFLKTALR--GVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v-~~i~~D~~d~-~~l~~~~~--~~d~vi~~~ 171 (265)
..++.+|+|+||+|.||...++.+...|++|++++++.++.+.....+. .++..+ .+. +.+.+... ++|++|.+.
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADIVLPLE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence 3457899999999999999999999999999999998877654322122 223233 232 33444443 589999873
Q ss_pred ch-HHHHHHHh-CCCCEEEEecccc
Q 024643 172 EG-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+. .+..+... ..-.++|.++...
T Consensus 236 g~~~~~~~~~~l~~~G~iv~~G~~~ 260 (342)
T 4eye_A 236 GGPAFDDAVRTLASEGRLLVVGFAA 260 (342)
T ss_dssp C--CHHHHHHTEEEEEEEEEC----
T ss_pred chhHHHHHHHhhcCCCEEEEEEccC
Confidence 32 23333222 2235888887543
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0012 Score=58.21 Aligned_cols=70 Identities=10% Similarity=0.021 Sum_probs=53.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....+++|+|.|+ |.+|+.+++.|...|++|++.+|+.++.+.....+++.+. .+++.+.++++|+|+.+
T Consensus 153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~l~~aDvVi~~ 222 (300)
T 2rir_A 153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEHVKDIDICINT 222 (300)
T ss_dssp SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHHSTTCSEEEEC
T ss_pred CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHHhhCCCEEEEC
Confidence 3567889999997 9999999999999999999999988665433222333321 23467788999999977
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.003 Score=55.86 Aligned_cols=64 Identities=8% Similarity=0.061 Sum_probs=52.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+++|.++|- |.+|..+++.|++.||+|++.+|++++.+.+...+.... ++..++.+++|+||.+
T Consensus 3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a-------~s~~e~~~~~dvv~~~ 66 (300)
T 3obb_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAA-------RSARDAVQGADVVISM 66 (300)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEEC-------SSHHHHHTTCSEEEEC
T ss_pred cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEc-------CCHHHHHhcCCceeec
Confidence 568999998 999999999999999999999999988877654444331 2456778899999977
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0037 Score=56.74 Aligned_cols=71 Identities=13% Similarity=0.100 Sum_probs=57.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
..++++|+|.|+ |.+|+.+++.+.+.|++|++++.++........ -+.+..|+.|.+.+.++++.+|++..
T Consensus 9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a--d~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA--HEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS--SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC--CEEEECCCCCHHHHHHHHHhCCccee
Confidence 446789999998 889999999999999999999887643221111 24677899999999999999998765
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0018 Score=58.62 Aligned_cols=91 Identities=12% Similarity=0.024 Sum_probs=54.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcc----hhhhcCCcc------EEeeeCCC--CHHHHHHHHc-CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN----AMESFGTYV------ESMAGDAS--NKKFLKTALR-GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~----~~~~~~~~v------~~i~~D~~--d~~~l~~~~~-~~ 164 (265)
+++|.|.||+|.+|+.+++.|.+++ .+|+++.++... .....+... .....++. |++ +.++ ++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 84 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPTDPK---HEEFEDV 84 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEESCTT---SGGGTTC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeCCHH---HHhcCCC
Confidence 4689999999999999999998875 688888764321 111111110 00001111 222 2346 89
Q ss_pred CEEEEcCchH----HHHHHHhCCCCEEEEeccc
Q 024643 165 RSIICPSEGF----ISNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 165 d~vi~~~~~~----~~~aa~~~gv~r~V~iSS~ 193 (265)
|+||.+.+.. ....+.++|++ +|-.|+.
T Consensus 85 DvV~~atp~~~~~~~a~~~~~aG~~-VId~s~~ 116 (354)
T 1ys4_A 85 DIVFSALPSDLAKKFEPEFAKEGKL-IFSNASA 116 (354)
T ss_dssp CEEEECCCHHHHHHHHHHHHHTTCE-EEECCST
T ss_pred CEEEECCCchHHHHHHHHHHHCCCE-EEECCch
Confidence 9999986543 22234556754 7766665
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0033 Score=57.19 Aligned_cols=90 Identities=16% Similarity=0.111 Sum_probs=52.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFI 175 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~~ 175 (265)
+++|.|.||||++|.+|++.|.++++ ++..+....+.-....-.+.+...-++.. ..++++|+||.+.+...
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~~-----~~~~~~Dvvf~a~~~~~ 76 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE-----TAFEGVDIALFSAGSST 76 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECCT-----TTTTTCSEEEECSCHHH
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCCH-----HHhcCCCEEEECCChHh
Confidence 56899999999999999999888765 33444322211111100111222222221 12578999998865432
Q ss_pred ----HHHHHhCCCCEEEEecccc
Q 024643 176 ----SNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 176 ----~~aa~~~gv~r~V~iSS~~ 194 (265)
.....++|+ ++|-+|+..
T Consensus 77 s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 77 SAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp HHHHHHHHHHTTC-EEEECSSTT
T ss_pred HHHHHHHHHHCCC-EEEEcCCcc
Confidence 222345676 577777753
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00056 Score=63.56 Aligned_cols=70 Identities=9% Similarity=-0.053 Sum_probs=48.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEe-------------eeCCCCHHHHHHHHcCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i-------------~~D~~d~~~l~~~~~~~d~ 166 (265)
|+|.|.|+ |.+|..++..|++.|++|++++|++++.+.+......+. .+.+.-..++.++++++|+
T Consensus 1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 58999985 999999999999999999999999887665533211110 0011101123456778999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
+|.+
T Consensus 80 viia 83 (436)
T 1mv8_A 80 SFIC 83 (436)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9987
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0018 Score=56.90 Aligned_cols=63 Identities=5% Similarity=-0.123 Sum_probs=48.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.|+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++.. ..+ +.++++ +|+||.+
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~---~~~~~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATL----ADS---VADVAA-ADLIHIT 77 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEE----CSS---HHHHTT-SSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEE----cCC---HHHHHh-CCEEEEE
Confidence 468999986 99999999999999999999999998876654434332 123 445566 8888877
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0014 Score=62.56 Aligned_cols=73 Identities=16% Similarity=0.206 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHH-HcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTA-LRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~-~~~~d~vi~~ 170 (265)
..+++++|.|+ |.+|+.+++.|.+.|++|++++.++++.+.+... ++.++.+|.++++.+.++ ++.++.++.+
T Consensus 125 ~~~~hviI~G~-g~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t 199 (565)
T 4gx0_A 125 DTRGHILIFGI-DPITRTLIRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIAN 199 (565)
T ss_dssp TCCSCEEEESC-CHHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEEC
T ss_pred ccCCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEe
Confidence 34678999998 8999999999999999999999999887766656 899999999999999876 5789998876
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0015 Score=58.40 Aligned_cols=97 Identities=12% Similarity=0.133 Sum_probs=61.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH-HHHHHHH--cCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~-~~l~~~~--~~~d~vi~~~~ 172 (265)
..++.+|+|+||+|.+|...++.+...|++|+++ +++++.+.....+...+. +-.+. +.+.+.. .++|++|.+.+
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g 225 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGATPID-ASREPEDYAAEHTAGQGFDLVYDTLG 225 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTSEEEE-TTSCHHHHHHHHHTTSCEEEEEESSC
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCCCEec-cCCCHHHHHHHHhcCCCceEEEECCC
Confidence 3457899999999999999999999999999998 777665443322344433 22232 3344444 36899997743
Q ss_pred -hHHHHHHHh-CCCCEEEEecccc
Q 024643 173 -GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 173 -~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
..+..++.. ..-.++|.++...
T Consensus 226 ~~~~~~~~~~l~~~G~iv~~g~~~ 249 (343)
T 3gaz_A 226 GPVLDASFSAVKRFGHVVSCLGWG 249 (343)
T ss_dssp THHHHHHHHHEEEEEEEEESCCCS
T ss_pred cHHHHHHHHHHhcCCeEEEEcccC
Confidence 333333222 2235788776544
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0013 Score=60.19 Aligned_cols=72 Identities=10% Similarity=0.001 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCC------------------CCHHHHHH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA------------------SNKKFLKT 159 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~------------------~d~~~l~~ 159 (265)
+..+|+|+|+ |.+|...++.+...|++|++++|+..+.+.....+.+++..|+ .+.+.+.+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 5679999999 9999999999999999999999998876655433455544331 12456788
Q ss_pred HHcCCCEEEEc
Q 024643 160 ALRGVRSIICP 170 (265)
Q Consensus 160 ~~~~~d~vi~~ 170 (265)
+++++|+||.+
T Consensus 262 ~l~~aDIVI~t 272 (381)
T 3p2y_A 262 AITKFDIVITT 272 (381)
T ss_dssp HHTTCSEEEEC
T ss_pred HHhcCCEEEEC
Confidence 89999999975
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00077 Score=63.04 Aligned_cols=71 Identities=10% Similarity=0.060 Sum_probs=49.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEe-------------eeCCCCHHHHHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM-------------AGDASNKKFLKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i-------------~~D~~d~~~l~~~~~~~d 165 (265)
.|+|.|.|+ |++|..++..|++.|++|++++|++++.+.+......+. .+.+.-..++.++++++|
T Consensus 2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 379999998 999999999999999999999999887665432111000 011100112455788999
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
++|.+
T Consensus 81 vViia 85 (450)
T 3gg2_A 81 IIFIA 85 (450)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99987
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00073 Score=59.83 Aligned_cols=71 Identities=8% Similarity=0.037 Sum_probs=50.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe--CCcchhhhcCCcc------EEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTYV------ESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R--~~~~~~~~~~~~v------~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|.|+ |.+|..++..|.+.|++|++++| ++++.+.+...+. +.......+++++.++++++|.||.+.
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 58999998 99999999999999999999999 7766655433221 100001222224556788999999883
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00056 Score=60.92 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=47.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchh--hhcCCccEEeeeCCCC---HHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAM--ESFGTYVESMAGDASN---KKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~--~~~~~~v~~i~~D~~d---~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|+||+|++|..++..|+..| .+|+++++++.+.. .+..... ..++.. ..++.++++++|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~---~~~l~~~~~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET---RATVKGYLGPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSS---SCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCc---CceEEEecCCCCHHHHhCCCCEEEEC
Confidence 689999999999999999999888 79999999872211 1211110 011111 13466789999999987
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0011 Score=59.29 Aligned_cols=95 Identities=13% Similarity=0.026 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHHc--CCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALR--GVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~~--~~d~vi~~~ 171 (265)
++.+|+|+|+ |.+|..+++.+...|+ +|+++++++++.+.....++.. ..|..+. +.+.+... ++|++|.+.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~-~~~~~~~~~~~~v~~~~~g~g~D~vid~~ 244 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY-VINPFEEDVVKEVMDITDGNGVDVFLEFS 244 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE-EECTTTSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-EECCCCcCHHHHHHHHcCCCCCCEEEECC
Confidence 6789999999 9999999999999999 9999999887654432222221 1344432 23333332 689999873
Q ss_pred c--hHHHHHHHh-CCCCEEEEecccc
Q 024643 172 E--GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~--~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ ..+..+.+. ..-.++|.+++..
T Consensus 245 g~~~~~~~~~~~l~~~G~iv~~g~~~ 270 (348)
T 2d8a_A 245 GAPKALEQGLQAVTPAGRVSLLGLYP 270 (348)
T ss_dssp CCHHHHHHHHHHEEEEEEEEECCCCS
T ss_pred CCHHHHHHHHHHHhcCCEEEEEccCC
Confidence 3 333333222 2224888887643
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0014 Score=56.00 Aligned_cols=41 Identities=10% Similarity=-0.002 Sum_probs=33.7
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
......++|.|.|+ |.+|..++..|++.|++|++.+|++++
T Consensus 14 ~~~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 14 NLYFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp -----CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 34556789999986 999999999999999999999999876
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0014 Score=57.55 Aligned_cols=66 Identities=9% Similarity=-0.057 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+.|+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...+......|+ .++++++|+||.+
T Consensus 6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~------~e~~~~aDvvi~~ 71 (303)
T 3g0o_A 6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASA------REFAGVVDALVIL 71 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSS------TTTTTTCSEEEEC
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCH------HHHHhcCCEEEEE
Confidence 3578999987 9999999999999999999999998876655333332212222 2345667777766
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0075 Score=53.93 Aligned_cols=94 Identities=12% Similarity=0.048 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCC----CHHHHHHHH-----cCCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----NKKFLKTAL-----RGVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~----d~~~l~~~~-----~~~d~v 167 (265)
.++.+|+|+|+ |.+|...++.+...|++|+++++++++.+.....+... ..|.. ..+.+.+.. .++|++
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~~~~~~~~~~~~~i~~~~~~~~g~g~D~v 244 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADV-TLVVDPAKEEESSIIERIRSAIGDLPNVT 244 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE-EEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCE-EEcCcccccHHHHHHHHhccccCCCCCEE
Confidence 45789999997 99999999988889999999999887655432222221 12333 244565555 369999
Q ss_pred EEcCc-h-HHHHHHHh-CCCCEEEEecc
Q 024643 168 ICPSE-G-FISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 168 i~~~~-~-~~~~aa~~-~gv~r~V~iSS 192 (265)
|.+.+ . .+..+.+. ..-.++|.++.
T Consensus 245 id~~g~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 245 IDCSGNEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEEec
Confidence 98733 2 33333332 23358888875
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00059 Score=59.50 Aligned_cols=64 Identities=8% Similarity=-0.046 Sum_probs=48.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|.|.|. |.+|..++..|++.|++|++.+|++++.+.+...++.. ..+ +.++++++|+||.+
T Consensus 1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~---~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQ----ASS---PAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEE----CSC---HHHHHHHCSEEEEC
T ss_pred CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCee----cCC---HHHHHHcCCEEEEE
Confidence 367999986 99999999999999999999999998776553333322 123 34556678888877
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.003 Score=55.52 Aligned_cols=52 Identities=13% Similarity=0.220 Sum_probs=41.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.++|.|.||.|.+|..++..|.+.|++|++++|+++. +..++++++|+||++
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--------------------~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--------------------VAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--------------------GHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--------------------CHHHHhcCCCEEEEe
Confidence 4689999988999999999999999999999887642 233456677777766
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0029 Score=56.18 Aligned_cols=64 Identities=8% Similarity=-0.097 Sum_probs=46.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------chhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------NAMESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
+.|+|.|.|. |.+|..++..|++.| ++|++.+|+++ ..+.+...++ .. . ++.++++++|+||.
T Consensus 23 M~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~----s~~e~~~~aDvVi~ 93 (317)
T 4ezb_A 23 MMTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV---EP-L----DDVAGIACADVVLS 93 (317)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-E----SSGGGGGGCSEEEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CC-C----CHHHHHhcCCEEEE
Confidence 4578999996 999999999999999 99999999872 2222222233 11 0 23356788999998
Q ss_pred c
Q 024643 170 P 170 (265)
Q Consensus 170 ~ 170 (265)
+
T Consensus 94 a 94 (317)
T 4ezb_A 94 L 94 (317)
T ss_dssp C
T ss_pred e
Confidence 7
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.01 Score=50.99 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC-------------------cchhhh------cCCcc--EEee
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK-------------------RNAMES------FGTYV--ESMA 148 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~-------------------~~~~~~------~~~~v--~~i~ 148 (265)
....+|+|.|+ |++|.++++.|+..|. ++++++++. .|++.+ ..+.+ +.+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~ 104 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQ 104 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEe
Confidence 34679999999 7799999999999995 778876653 222111 12333 3444
Q ss_pred eCCCCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEec
Q 024643 149 GDASNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iS 191 (265)
.++ +.+.+.+.++++|.||.+.+. .+.+++...++. +|..+
T Consensus 105 ~~~-~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p-~i~~~ 150 (251)
T 1zud_1 105 QRL-TGEALKDAVARADVVLDCTDNMATRQEINAACVALNTP-LITAS 150 (251)
T ss_dssp SCC-CHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCC-EEEEE
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCC-EEEEe
Confidence 444 446677888999999987432 355566666654 44444
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0012 Score=57.55 Aligned_cols=65 Identities=9% Similarity=0.047 Sum_probs=49.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.|+|.|.|+ |.+|..++..|.+.|++|++++|++++.+.+...++.. ..+ ..++++++|+||.+.
T Consensus 4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v 68 (301)
T 3cky_A 4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQGAQA----CEN---NQKVAAASDIIFTSL 68 (301)
T ss_dssp CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEEC
Confidence 578999996 99999999999999999999999887766554434432 223 334566789998774
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0012 Score=57.60 Aligned_cols=64 Identities=11% Similarity=-0.068 Sum_probs=48.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|.|+ |.+|..++..|.+.|++|++.+|++++.+.+...++.+ ..+ ..++++++|+||.+.
T Consensus 1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~Dvvi~~v 64 (296)
T 2gf2_A 1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDAGEQV----VSS---PADVAEKADRIITML 64 (296)
T ss_dssp CCEEEECC-STTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTTTCEE----CSS---HHHHHHHCSEEEECC
T ss_pred CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----cCC---HHHHHhcCCEEEEeC
Confidence 57999996 99999999999999999999999988776654444432 123 334566788888773
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0022 Score=59.76 Aligned_cols=98 Identities=10% Similarity=0.060 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCC-------------CH-------H
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------K 155 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~-------------d~-------~ 155 (265)
..++.+|+|+||+|.+|...++.+...|++|+++++++++.+.....+++.+ .|.. +. +
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~v-i~~~~~d~~~~~~~~~~~~~~~~~~~~ 304 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAI-IDRNAEGYRFWKDENTQDPKEWKRFGK 304 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEE-EETTTTTCCSEEETTEECHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEE-EecCcCcccccccccccchHHHHHHHH
Confidence 3457899999999999999999999999999999998877654422222221 1222 11 3
Q ss_pred HHHHHH--cCCCEEEEcCch-HHHHHHHh-CCCCEEEEecccc
Q 024643 156 FLKTAL--RGVRSIICPSEG-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 156 ~l~~~~--~~~d~vi~~~~~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+.+.. .++|++|.+.+. .+..+... ..-.++|.+++..
T Consensus 305 ~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~ 347 (456)
T 3krt_A 305 RIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTS 347 (456)
T ss_dssp HHHHHHTSCCEEEEEECSCHHHHHHHHHHEEEEEEEEESCCTT
T ss_pred HHHHHhCCCCCcEEEEcCCchhHHHHHHHhhCCcEEEEEecCC
Confidence 444444 378999977443 33333222 1224788877643
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.022 Score=51.29 Aligned_cols=84 Identities=12% Similarity=0.062 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc---
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE--- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~--- 172 (265)
++|+|+|+|+ |.+|+.+++.+.+.|++|++++.++........ -+.+..|..|.+.+.++++ ++|.|+....
T Consensus 10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~--d~~~~~~~~d~~~l~~~~~~~~~d~v~~~~e~~~ 86 (391)
T 1kjq_A 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA--HRSHVINMLDGDALRRVVELEKPHYIVPEIEAIA 86 (391)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS--SEEEECCTTCHHHHHHHHHHHCCSEEEECSSCSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhhc--cceEECCCCCHHHHHHHHHHcCCCEEEECCCcCC
Confidence 4689999988 789999999999999999999876543221111 2456678899998888775 8999886522
Q ss_pred hHHHHHHHhCCC
Q 024643 173 GFISNAGSLKGV 184 (265)
Q Consensus 173 ~~~~~aa~~~gv 184 (265)
....+.+...|+
T Consensus 87 ~~~~~~l~~~gi 98 (391)
T 1kjq_A 87 TDMLIQLEEEGL 98 (391)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHhCCC
Confidence 122334455665
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0066 Score=56.14 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=63.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEE-ee---eCCCC----------------HH
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES-MA---GDASN----------------KK 155 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~-i~---~D~~d----------------~~ 155 (265)
..++.+|+|+||+|.||...++.+...|.+|+++++++++.+....-+... +. .|+.+ .+
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 445789999999999999999999999999999999887665442222221 11 12211 23
Q ss_pred HHHHHH-cCCCEEEEcCch-HHHHHHHh-CCCCEEEEecccc
Q 024643 156 FLKTAL-RGVRSIICPSEG-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 156 ~l~~~~-~~~d~vi~~~~~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+.+.. .++|++|.+.+. .+..+... ..-.++|.+++..
T Consensus 298 ~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~~G~iv~~G~~~ 339 (447)
T 4a0s_A 298 LVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSS 339 (447)
T ss_dssp HHHHHHSSCCSEEEECSCHHHHHHHHHHSCTTCEEEESCCTT
T ss_pred HHHHHhCCCceEEEECCCchHHHHHHHHHhcCCEEEEEecCC
Confidence 344433 369999987443 22222222 2336899988654
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.00088 Score=58.44 Aligned_cols=66 Identities=14% Similarity=0.033 Sum_probs=48.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
.|+|.|.|+ |.+|..++..|.+.|++|++++|++++.+.+...++.. ..+ +.++++++|+||.+.+
T Consensus 5 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 5 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIITMLP 70 (299)
T ss_dssp -CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEECCS
T ss_pred cceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCee----cCC---HHHHHhCCCEEEEECC
Confidence 368999995 99999999999999999999999987765543333332 223 3345667899998743
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0036 Score=57.69 Aligned_cols=72 Identities=10% Similarity=0.014 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCC----------------CC------HH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------SN------KK 155 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~----------------~d------~~ 155 (265)
+..+|+|+|+ |-+|...++.+...|++|+++++++.+.+.....+.+++..++ ++ .+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 4579999999 9999999999999999999999998775544333444443321 22 35
Q ss_pred HHHHHHcCCCEEEEc
Q 024643 156 FLKTALRGVRSIICP 170 (265)
Q Consensus 156 ~l~~~~~~~d~vi~~ 170 (265)
.+.++++++|+||.+
T Consensus 268 ~l~e~l~~aDVVI~t 282 (405)
T 4dio_A 268 LVAEHIAKQDIVITT 282 (405)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEEC
Confidence 788899999999976
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0018 Score=56.43 Aligned_cols=62 Identities=11% Similarity=0.046 Sum_probs=47.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+++++|+|+ |+.|+.++..|.+.|.+|+++.|+.++++.+..-+++.+ ++.+. .++|.||.+
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~l-------~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPPK-------SAFDLIINA 179 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHHTCEEE--SSCCS-------SCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHHh-------ccCCEEEEc
Confidence 789999998 999999999999999999999999988766541123322 33331 278999977
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0028 Score=56.62 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHH--cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~--~~~d~vi~~ 170 (265)
.++++|+|+||+|.||..+++.+... |++|+++++++++.+.....+... ..|..+.+ .+.+.. .++|++|.+
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY-VINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSE-EEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCE-EecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 35689999999999999999999999 999999999887654332112221 23444433 344544 368999987
Q ss_pred Cch--HHHHHHHh-CCCCEEEEecccc
Q 024643 171 SEG--FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 171 ~~~--~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+. .+..+.+. ..-.++|.++...
T Consensus 248 ~g~~~~~~~~~~~l~~~G~iv~~g~~~ 274 (347)
T 1jvb_A 248 NNSEKTLSVYPKALAKQGKYVMVGLFG 274 (347)
T ss_dssp CCCHHHHTTGGGGEEEEEEEEECCSSC
T ss_pred CCCHHHHHHHHHHHhcCCEEEEECCCC
Confidence 432 22222221 1124888887643
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0039 Score=56.86 Aligned_cols=74 Identities=12% Similarity=-0.063 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCC----------------------CH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS----------------------NK 154 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~----------------------d~ 154 (265)
.++++|+|+|+ |.+|..+++.+...|++|++++|++.+.+....-+.+++..|.. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 170 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 35789999997 99999999999999999999999887654432223333322221 13
Q ss_pred HHHHHHHcCCCEEEEcC
Q 024643 155 KFLKTALRGVRSIICPS 171 (265)
Q Consensus 155 ~~l~~~~~~~d~vi~~~ 171 (265)
+.+.+.++++|+||.+.
T Consensus 249 ~~l~~~~~~aDvVi~~~ 265 (384)
T 1l7d_A 249 EAVLKELVKTDIAITTA 265 (384)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHhCCCCEEEECC
Confidence 34778889999999774
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0074 Score=54.88 Aligned_cols=90 Identities=13% Similarity=0.001 Sum_probs=52.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCC---eEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV-KRT---RIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~-~G~---~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
+++|.|.||+|++|+.+++.++. +++ .+..+..+. .-.... -.+.++...|..|++. ++++|+||.+.+.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~~~g~~i~~~~~~~~~~----~~~~DvVf~a~g~ 75 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGG 75 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccccCCCceEEEecCChHH----hcCCCEEEECCCc
Confidence 36899999999999999995544 443 455555442 111110 0012233344555554 3699999998654
Q ss_pred H----HHHHHHhCCCC-EEEEeccc
Q 024643 174 F----ISNAGSLKGVQ-HVILLSQL 193 (265)
Q Consensus 174 ~----~~~aa~~~gv~-r~V~iSS~ 193 (265)
. ......++|++ .+|=.|+.
T Consensus 76 ~~s~~~a~~~~~~G~k~vVID~ss~ 100 (367)
T 1t4b_A 76 DYTNEIYPKLRESGWQGYWIDAASS 100 (367)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred hhHHHHHHHHHHCCCCEEEEcCChh
Confidence 3 23334567875 44444443
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0036 Score=56.37 Aligned_cols=88 Identities=13% Similarity=0.078 Sum_probs=59.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCC-------------------cchhhh------cCCccEEe--
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK-------------------RNAMES------FGTYVESM-- 147 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~-------------------~~~~~~------~~~~v~~i-- 147 (265)
.....+|+|.|+ |++|.++++.|+..| -++++++++. .|++.. ..+.+++.
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~ 109 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV 109 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence 445789999999 899999999999999 4788887754 121111 23344443
Q ss_pred eeCC--------------CCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCC
Q 024643 148 AGDA--------------SNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGV 184 (265)
Q Consensus 148 ~~D~--------------~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv 184 (265)
..++ .+.+.+.+.++++|.||.+.+. .+.++|...++
T Consensus 110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~ 165 (340)
T 3rui_A 110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENK 165 (340)
T ss_dssp CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTTC
T ss_pred eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcCC
Confidence 3333 1345567888999999987332 35566777664
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0013 Score=58.69 Aligned_cols=72 Identities=13% Similarity=0.024 Sum_probs=49.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-ccEEeee------CCC-CHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAG------DAS-NKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~v~~i~~------D~~-d~~~l~~~~~~~d~vi~~ 170 (265)
.|+|.|.|+ |.+|..++..|.+.|++|++++|++++.+.+... .+.+... .+. ...++.++++++|.||.+
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 479999998 9999999999999999999999988765544211 2211110 010 011244567899999987
Q ss_pred C
Q 024643 171 S 171 (265)
Q Consensus 171 ~ 171 (265)
.
T Consensus 83 v 83 (359)
T 1bg6_A 83 V 83 (359)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0031 Score=55.81 Aligned_cols=65 Identities=6% Similarity=-0.098 Sum_probs=47.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC--cchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK--RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~--~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+|+|.|.|. |.+|..++..|++.|+ +|++.+|++ ++.+.+...++.. ..+ ..++++++|+||.+
T Consensus 23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~~~----~~~---~~e~~~~aDvVi~~ 90 (312)
T 3qsg_A 23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGVSC----KAS---VAEVAGECDVIFSL 90 (312)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTCEE----CSC---HHHHHHHCSEEEEC
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCCEE----eCC---HHHHHhcCCEEEEe
Confidence 4679999997 9999999999999999 999999973 4444333233332 123 34566788999977
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0027 Score=54.80 Aligned_cols=66 Identities=15% Similarity=0.135 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.+ +++|+|+ |+.|+.++..|++.|+ +|++++|+.++++++.. ....+ + .+++.+.++++|.||.++
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~-~~~~~--~---~~~~~~~~~~aDiVInat 174 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF-PVKIF--S---LDQLDEVVKKAKSLFNTT 174 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS-SCEEE--E---GGGHHHHHHTCSEEEECS
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-HcccC--C---HHHHHhhhcCCCEEEECC
Confidence 45 8999998 9999999999999998 99999999988776533 22221 2 234567788999999873
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0025 Score=57.87 Aligned_cols=89 Identities=11% Similarity=0.081 Sum_probs=54.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcch---hhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA---MESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~---~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+++|.|.||+|.+|+.+++.|.++. .+++++.+..+.. .... ...+ ..|+.-.+ .+.++++|+||++.
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v---~~dl~~~~--~~~~~~vDvVf~at 90 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQK---LPTLVSVK--DADFSTVDAVFCCL 90 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSC---CCCCBCGG--GCCGGGCSEEEECC
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcc---cccceecc--hhHhcCCCEEEEcC
Confidence 3689999999999999999999876 4888876543221 1111 1111 12332222 33557899999885
Q ss_pred chH----HHHHHHhCCCCEEEEecccc
Q 024643 172 EGF----ISNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 172 ~~~----~~~aa~~~gv~r~V~iSS~~ 194 (265)
+.. ....+ ++|+ ++|-.|+..
T Consensus 91 p~~~s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 91 PHGTTQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp CTTTHHHHHHTS-CTTC-EEEECSSTT
T ss_pred CchhHHHHHHHH-hCCC-EEEECCccc
Confidence 432 22223 4555 677777754
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0018 Score=56.47 Aligned_cols=69 Identities=7% Similarity=0.058 Sum_probs=49.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhc---CC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~---~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++++|+|+ |++|+.++..|.+.|. +|++++|+.++++++. .. .+.. .++.+.+ . .++|.||.+
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~--~~~~~l~---~--~~~DivIna 188 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI--SRYEALE---G--QSFDIVVNA 188 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEE--ECSGGGT---T--CCCSEEEEC
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeE--eeHHHhc---c--cCCCEEEEC
Confidence 345789999998 8999999999999995 9999999988766542 11 1232 2333321 1 678999987
Q ss_pred Cc
Q 024643 171 SE 172 (265)
Q Consensus 171 ~~ 172 (265)
++
T Consensus 189 Tp 190 (272)
T 3pwz_A 189 TS 190 (272)
T ss_dssp SS
T ss_pred CC
Confidence 43
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0018 Score=61.00 Aligned_cols=42 Identities=10% Similarity=-0.025 Sum_probs=37.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF 140 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~ 140 (265)
..|+|.|.|+ |++|..++..|++.|++|++++|++++.+.+.
T Consensus 7 ~~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~ 48 (478)
T 2y0c_A 7 GSMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQAKIDILN 48 (478)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 4689999988 99999999999999999999999988776654
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0049 Score=55.62 Aligned_cols=89 Identities=10% Similarity=0.000 Sum_probs=54.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCC-cc---hhhhcCC---------ccEEeeeCCCCHHHHHHHHcCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDK-RN---AMESFGT---------YVESMAGDASNKKFLKTALRGV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~-~~---~~~~~~~---------~v~~i~~D~~d~~~l~~~~~~~ 164 (265)
+++|.|.||+|.+|+.+++.|.+.. .+++++..+. .. ....++. .......|+ |++. ++++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~v 78 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKDV 78 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTTC
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcCC
Confidence 4689999999999999999998765 5888876222 11 1111111 011111232 3332 3689
Q ss_pred CEEEEcCchH----HHHHHHhCCCCEEEEeccc
Q 024643 165 RSIICPSEGF----ISNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 165 d~vi~~~~~~----~~~aa~~~gv~r~V~iSS~ 193 (265)
|+||.+.+.. ....+.++|++ +|-.|+.
T Consensus 79 DvVf~atp~~~s~~~a~~~~~aG~~-VId~s~~ 110 (350)
T 2ep5_A 79 DVVLSALPNELAESIELELVKNGKI-VVSNASP 110 (350)
T ss_dssp SEEEECCCHHHHHHHHHHHHHTTCE-EEECSST
T ss_pred CEEEECCChHHHHHHHHHHHHCCCE-EEECCcc
Confidence 9999886543 23334567764 7777765
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0044 Score=54.00 Aligned_cols=65 Identities=9% Similarity=0.103 Sum_probs=50.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.|+|.|.|+ |.+|..++..|++.|+ +|++.+|++++.+.+... ++... .| ..++++++|.||.+.
T Consensus 3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~----~~---~~~~~~~aDvVilav 71 (280)
T 3tri_A 3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTT----QD---NRQGALNADVVVLAV 71 (280)
T ss_dssp CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEE----SC---HHHHHSSCSEEEECS
T ss_pred CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe----CC---hHHHHhcCCeEEEEe
Confidence 478999999 9999999999999998 999999999877655332 34321 22 345678999999883
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0016 Score=58.71 Aligned_cols=92 Identities=17% Similarity=0.044 Sum_probs=60.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC---cchhhhcCCccEEeeeCCCC--HHHHHHHHcCCCEEEEcCc-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK---RNAMESFGTYVESMAGDASN--KKFLKTALRGVRSIICPSE- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~---~~~~~~~~~~v~~i~~D~~d--~~~l~~~~~~~d~vi~~~~- 172 (265)
+.+|+|+|| |.+|..+++.+...|++|++++++. ++.+.....+++.+ | .+ .+.+.+.-.++|++|.+.+
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~ga~~v--~-~~~~~~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYY--N-SSNGYDKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHTCEEE--E-CTTCSHHHHHHHCCEEEEEECCCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhCCcee--c-hHHHHHHHHHhCCCCCEEEECCCC
Confidence 789999999 9999999999999999999999987 66543322234444 4 43 1233332257999997733
Q ss_pred -hHH-HHHHHh-CCCCEEEEecccc
Q 024643 173 -GFI-SNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 173 -~~~-~~aa~~-~gv~r~V~iSS~~ 194 (265)
..+ ..+.+. ..-.++|.++...
T Consensus 257 ~~~~~~~~~~~l~~~G~iv~~g~~~ 281 (366)
T 2cdc_A 257 DVNILGNVIPLLGRNGVLGLFGFST 281 (366)
T ss_dssp CTHHHHHHGGGEEEEEEEEECSCCC
T ss_pred hHHHHHHHHHHHhcCCEEEEEecCC
Confidence 233 333222 1225888887643
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0038 Score=57.41 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCC-------------CH-------HH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDAS-------------NK-------KF 156 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~-------------d~-------~~ 156 (265)
.++.+|+|+|+ |.+|..+++.+...|++|++++|+..+.+.....+.+++..|.. +. +.
T Consensus 170 l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 248 (401)
T 1x13_A 170 VPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMEL 248 (401)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHH
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHH
Confidence 35789999998 99999999999999999999999987655443234444433321 11 14
Q ss_pred HHHHHcCCCEEEEc
Q 024643 157 LKTALRGVRSIICP 170 (265)
Q Consensus 157 l~~~~~~~d~vi~~ 170 (265)
+.+.+.++|+||.+
T Consensus 249 l~e~~~~aDvVI~~ 262 (401)
T 1x13_A 249 FAAQAKEVDIIVTT 262 (401)
T ss_dssp HHHHHHHCSEEEEC
T ss_pred HHHHhCCCCEEEEC
Confidence 67788899999976
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0086 Score=53.86 Aligned_cols=90 Identities=14% Similarity=0.035 Sum_probs=54.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCC---c---chhhhc----CC-ccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK---R---NAMESF----GT-YVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~---~---~~~~~~----~~-~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
+++|.|.||||++|+++++.|.+. .+++..+..+. + +..+.. +. ...+... .+.+ ++++++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv 78 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV 78 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence 578999999999999999999985 46887775543 2 122111 11 2222222 0222 22378999
Q ss_pred EEEcCchHH----HHHHHhCCCCEEEEecccc
Q 024643 167 IICPSEGFI----SNAGSLKGVQHVILLSQLS 194 (265)
Q Consensus 167 vi~~~~~~~----~~aa~~~gv~r~V~iSS~~ 194 (265)
||.+.+... .....++|+ ++|-+|+..
T Consensus 79 vf~a~p~~~s~~~~~~~~~~g~-~vIDlSa~f 109 (337)
T 3dr3_A 79 VFLATAHEVSHDLAPQFLEAGC-VVFDLSGAF 109 (337)
T ss_dssp EEECSCHHHHHHHHHHHHHTTC-EEEECSSTT
T ss_pred EEECCChHHHHHHHHHHHHCCC-EEEEcCCcc
Confidence 999855432 222345665 577777753
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0051 Score=58.02 Aligned_cols=70 Identities=17% Similarity=0.149 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC---ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT---YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~---~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+|+|.|+|. |.+|..++..|++.|++|++.+|++++.+.+... +..+.. ..+.+.+.+.++++|+||++
T Consensus 3 ~~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~--~~s~~e~v~~l~~aDvVil~ 75 (484)
T 4gwg_A 3 AQADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVG--AQSLKEMVSKLKKPRRIILL 75 (484)
T ss_dssp CCBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE--CSSHHHHHHTBCSSCEEEEC
T ss_pred CCCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceec--cCCHHHHHhhccCCCEEEEe
Confidence 4578999997 9999999999999999999999999877655321 111111 24555555555679999977
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0022 Score=54.75 Aligned_cols=74 Identities=8% Similarity=-0.021 Sum_probs=51.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEcC-chHHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPS-EGFIS 176 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~~-~~~~~ 176 (265)
+|+|.|.|+ |.+|..++..|.+.|++|.+.+|++++.+.+... ++.. ..+ +.++++++|+||.+. +..+.
T Consensus 3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~Vi~~v~~~~~~ 74 (259)
T 2ahr_A 3 AMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILGIKPQLFE 74 (259)
T ss_dssp CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEECSCGGGHH
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe----eCC---HHHHHhcCCEEEEEeCcHhHH
Confidence 479999995 9999999999999999999999988766543211 2211 233 345567899999874 33344
Q ss_pred HHHH
Q 024643 177 NAGS 180 (265)
Q Consensus 177 ~aa~ 180 (265)
+++.
T Consensus 75 ~v~~ 78 (259)
T 2ahr_A 75 TVLK 78 (259)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 4433
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0061 Score=54.46 Aligned_cols=66 Identities=12% Similarity=-0.018 Sum_probs=50.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|...|++|++.+|+.++.+.....++... + +.++++++|+|+.+
T Consensus 152 ~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~g~~~~-----~---l~e~l~~aDvVi~~ 217 (330)
T 2gcg_A 152 GLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFV-----S---TPELAAQSDFIVVA 217 (330)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHTTTCEEC-----C---HHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHhcCceeC-----C---HHHHHhhCCEEEEe
Confidence 456789999998 999999999999999999999998765443322233321 2 45567889999976
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.002 Score=56.47 Aligned_cols=67 Identities=13% Similarity=0.105 Sum_probs=48.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhc---CC--ccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF---GT--YVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~---~~--~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
...+++++|+|+ |++|+.++..|++.|+ +|++..|+.++++.+. .. .+..+ ++.+ + ..++|.||.
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l---~~~aDiIIn 193 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---L---KQSYDVIIN 193 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---C---CSCEEEEEE
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---h---cCCCCEEEE
Confidence 346789999998 8999999999999995 9999999987765442 11 13332 2222 1 167888887
Q ss_pred cC
Q 024643 170 PS 171 (265)
Q Consensus 170 ~~ 171 (265)
++
T Consensus 194 aT 195 (281)
T 3o8q_A 194 ST 195 (281)
T ss_dssp CS
T ss_pred cC
Confidence 73
|
| >2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.021 Score=52.47 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
++|+|+|+|+ |.+|+.+++.+.+.|++|++++.++........ -+.+..|+.|.+.+.++++ ++|.|+..
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~a--d~~~~~~~~d~~~l~~~~~~~~~d~V~~~ 89 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQVA--HRSYVGNMMDKDFLWSVVEREKPDAIIPE 89 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHS--SEEEESCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhc--ceEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 3579999998 789999999999999999999877643221111 2456778899998888775 89998875
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0038 Score=56.48 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--hH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--GF 174 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~~ 174 (265)
.++.+|+|+|+ |.+|...++.+...|++|+++++++++.+....-+... ..|..+.+.+.++..++|++|.+.+ ..
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~g~Dvvid~~g~~~~ 270 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAAPHN 270 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSSCCC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-EeccccHHHHHHhhcCCCEEEECCCCHHH
Confidence 45789999998 88999999988889999999999887765432222222 2456666555555578999997732 22
Q ss_pred HHHHHHh-CCCCEEEEeccc
Q 024643 175 ISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 175 ~~~aa~~-~gv~r~V~iSS~ 193 (265)
+..+.+. ..-.++|.++..
T Consensus 271 ~~~~~~~l~~~G~iv~~G~~ 290 (369)
T 1uuf_A 271 LDDFTTLLKRDGTMTLVGAP 290 (369)
T ss_dssp HHHHHTTEEEEEEEEECCCC
T ss_pred HHHHHHHhccCCEEEEeccC
Confidence 3333222 112478887754
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0048 Score=54.89 Aligned_cols=96 Identities=13% Similarity=0.119 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHHcCCCEEEEcC-
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTALRGVRSIICPS- 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~~~~d~vi~~~- 171 (265)
..++.+|+|+|+ |.+|...++.+...|.+|+++++++++.+....-+...+ .|..+. +.+.+...++|.+|.+.
T Consensus 164 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~g~~d~vid~~g 241 (340)
T 3s2e_A 164 TRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVA-VNARDTDPAAWLQKEIGGAHGVLVTAV 241 (340)
T ss_dssp CCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCEE-EeCCCcCHHHHHHHhCCCCCEEEEeCC
Confidence 346789999998 889999999999999999999998877654432233222 344332 33444334789998773
Q ss_pred -chHHHHHHHh-CCCCEEEEeccc
Q 024643 172 -EGFISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 172 -~~~~~~aa~~-~gv~r~V~iSS~ 193 (265)
+..+..+.+. ..-.+++.++..
T Consensus 242 ~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 242 SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred CHHHHHHHHHHhccCCEEEEeCCC
Confidence 3333333332 223578877654
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0047 Score=55.46 Aligned_cols=95 Identities=11% Similarity=0.029 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc--hH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICPSE--GF 174 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--~~ 174 (265)
++.+|+|+|+ |.+|...++.+...|.+|+++++++++.+... .-+.+. ..|..+.+.+.+...++|++|.+.+ ..
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-vi~~~~~~~~~~~~~g~D~vid~~g~~~~ 257 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD-YVIGSDQAKMSELADSLDYVIDTVPVHHA 257 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC-EEETTCHHHHHHSTTTEEEEEECCCSCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce-eeccccHHHHHHhcCCCCEEEECCCChHH
Confidence 6789999996 99999999988889999999999887755433 222221 2355666667766678999997732 12
Q ss_pred HHHHHHh-CCCCEEEEecccc
Q 024643 175 ISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 175 ~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+..+.+. ..-.++|.++...
T Consensus 258 ~~~~~~~l~~~G~iv~~G~~~ 278 (357)
T 2cf5_A 258 LEPYLSLLKLDGKLILMGVIN 278 (357)
T ss_dssp SHHHHTTEEEEEEEEECSCCS
T ss_pred HHHHHHHhccCCEEEEeCCCC
Confidence 3333222 1224888887643
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0018 Score=56.27 Aligned_cols=66 Identities=15% Similarity=0.196 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|+|.|+ |.+|+.++..|.+.|++|++.+|+.++++.+... +++. .+ ++.+.++++|+||.+
T Consensus 127 ~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~~--~~-----~~~~~~~~aDiVi~a 193 (275)
T 2hk9_A 127 VKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEV--VN-----SPEEVIDKVQVIVNT 193 (275)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEEE--CS-----CGGGTGGGCSEEEEC
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCee--eh-----hHHhhhcCCCEEEEe
Confidence 34689999997 8999999999999999999999998776654322 2222 11 234567889999987
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0036 Score=55.11 Aligned_cols=66 Identities=3% Similarity=-0.068 Sum_probs=49.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
.|+|.|.|+ |.+|..++..|.+.|++|++++|++++.+.+...++.. ..+ ..++++++|+||.+.+
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~---~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQEGARL----GRT---PAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHTTCEE----CSC---HHHHHHHCSEEEECCS
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHcCCEE----cCC---HHHHHhcCCEEEEeCC
Confidence 478999997 99999999999999999999999987766543333332 123 3345678899998744
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0042 Score=54.93 Aligned_cols=92 Identities=11% Similarity=0.001 Sum_probs=56.9
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH--HHHHHH-cCCCEEEEcCc-hHHH
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK--FLKTAL-RGVRSIICPSE-GFIS 176 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~--~l~~~~-~~~d~vi~~~~-~~~~ 176 (265)
+|+|+||+|.+|...++.+...|++|+++++++++.+....-+.+.+ .|..+.+ .+.+.. .++|.+|.+.+ ..+.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 230 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGGRTLA 230 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTTTTHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcEE-EecCCcHHHHHHHhcCCcccEEEECCcHHHHH
Confidence 79999999999999999999999999999998876554432223221 3444431 222221 35899987732 2333
Q ss_pred HHHHh-CCCCEEEEeccc
Q 024643 177 NAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 177 ~aa~~-~gv~r~V~iSS~ 193 (265)
.+.+. ..-.+++.++..
T Consensus 231 ~~~~~l~~~G~~v~~G~~ 248 (328)
T 1xa0_A 231 TVLSRMRYGGAVAVSGLT 248 (328)
T ss_dssp HHHHTEEEEEEEEECSCC
T ss_pred HHHHhhccCCEEEEEeec
Confidence 33332 223588887754
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0047 Score=55.04 Aligned_cols=93 Identities=13% Similarity=0.061 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH-cCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~-~~~d~vi~~~~ 172 (265)
++.+|+|+|| |.+|...++.+...|+ +|+++++++++.+..... ... ..|..+. +.+.+.. .++|++|.+.+
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~-v~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADR-LVNPLEEDLLEVVRRVTGSGVEVLLEFSG 240 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSE-EECTTTSCHHHHHHHHHSSCEEEEEECSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHh-ccCcCccCHHHHHHHhcCCCCCEEEECCC
Confidence 6789999999 9999999999999998 999999988765543322 221 2355432 2233222 36899997733
Q ss_pred --hHHHHHHHh-CCCCEEEEeccc
Q 024643 173 --GFISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 173 --~~~~~aa~~-~gv~r~V~iSS~ 193 (265)
..+..+.+. ..-.++|.++..
T Consensus 241 ~~~~~~~~~~~l~~~G~iv~~g~~ 264 (343)
T 2dq4_A 241 NEAAIHQGLMALIPGGEARILGIP 264 (343)
T ss_dssp CHHHHHHHHHHEEEEEEEEECCCC
T ss_pred CHHHHHHHHHHHhcCCEEEEEecC
Confidence 333333222 122488888753
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0072 Score=54.57 Aligned_cols=95 Identities=9% Similarity=-0.018 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--cCCCEEEEcCchH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICPSEGF 174 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--~~~d~vi~~~~~~ 174 (265)
.++.+|+|+||+|.+|...++.+...|++|+++++ .++.+....-+... ..|..+.+...++. .++|++|.+.+..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~~~lGa~~-v~~~~~~~~~~~~~~~~g~D~vid~~g~~ 259 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELVRKLGADD-VIDYKSGSVEEQLKSLKPFDFILDNVGGS 259 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHHHHTTCSE-EEETTSSCHHHHHHTSCCBSEEEESSCTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHHHHcCCCE-EEECCchHHHHHHhhcCCCCEEEECCCCh
Confidence 45789999999999999999999999999998884 44443332222222 13444433222222 5799999874332
Q ss_pred -H--HHHHHh-CCCCEEEEeccc
Q 024643 175 -I--SNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 175 -~--~~aa~~-~gv~r~V~iSS~ 193 (265)
. ..+.+. ..-.++|.++..
T Consensus 260 ~~~~~~~~~~l~~~G~iv~~g~~ 282 (375)
T 2vn8_A 260 TETWAPDFLKKWSGATYVTLVTP 282 (375)
T ss_dssp HHHHGGGGBCSSSCCEEEESCCS
T ss_pred hhhhHHHHHhhcCCcEEEEeCCC
Confidence 1 222211 223588888753
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0039 Score=51.86 Aligned_cols=39 Identities=5% Similarity=0.014 Sum_probs=31.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.....|+|.|.|+ |.+|..++..|.+.|++|++++|+++
T Consensus 15 ~~~~~~~I~iiG~-G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 15 LYFQGMEITIFGK-GNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -----CEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4556789999995 99999999999999999999988764
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.035 Score=49.65 Aligned_cols=96 Identities=13% Similarity=-0.019 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCcchhhh--cCCccEEeeeCCCCHHHHHHHH------cCCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTAL------RGVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~--~~~~v~~i~~D~~d~~~l~~~~------~~~d~v 167 (265)
.++.+|+|+|+ |.+|...++.+...|.+ |+++++++++.+.. ....+..+..|-.+.+.+.+.+ .++|++
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv 256 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA 256 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence 45678999998 99999999999899987 89998888765432 1333333334433444443332 369999
Q ss_pred EEcCc-h-HHHHHHHh-CCCCEEEEeccc
Q 024643 168 ICPSE-G-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 168 i~~~~-~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
|.+.+ . .+..+.+. ..-.+++.++..
T Consensus 257 id~~g~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 257 LECTGVESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp EECSCCHHHHHHHHHHSCTTCEEEECCCC
T ss_pred EECCCChHHHHHHHHHhcCCCEEEEEccC
Confidence 97733 2 33333332 233689888753
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0033 Score=57.83 Aligned_cols=68 Identities=18% Similarity=0.158 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|+|+|+ |.+|+.+++.|...|+ +|++++|+.+++..+. .-+.+.+ ++ +++.+.+.++|+||.+
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~---~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEAV--RF---DELVDHLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEEC--CG---GGHHHHHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcee--cH---HhHHHHhcCCCEEEEc
Confidence 56889999998 9999999999999998 9999999987653321 1123322 22 3466677899999987
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.46 E-value=0.017 Score=51.78 Aligned_cols=94 Identities=12% Similarity=0.045 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCC--C-HHH---HHHHH-cCCCEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS--N-KKF---LKTAL-RGVRSII 168 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~--d-~~~---l~~~~-~~~d~vi 168 (265)
.++.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+.....++.. ..|.. | .+. +.+.. .++|++|
T Consensus 170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~i~~~~~~g~D~vi 247 (356)
T 1pl8_A 170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADL-VLQISKESPQEIARKVEGQLGCKPEVTI 247 (356)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSE-EEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE-EEcCcccccchHHHHHHHHhCCCCCEEE
Confidence 45789999997 9999999998888998 8999999887655433223321 23444 2 222 22222 4799999
Q ss_pred EcCc--hHHHHHHHh-CCCCEEEEecc
Q 024643 169 CPSE--GFISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 169 ~~~~--~~~~~aa~~-~gv~r~V~iSS 192 (265)
.+.+ ..+..+.+. ..-.++|.++.
T Consensus 248 d~~g~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 248 ECTGAEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred ECCCChHHHHHHHHHhcCCCEEEEEec
Confidence 8733 233333332 23358888875
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0036 Score=52.42 Aligned_cols=74 Identities=7% Similarity=-0.033 Sum_probs=51.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEE-EEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc-CchHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGFI 175 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~~~ 175 (265)
+|+|.|.|+ |.+|..++..|.+.|++|++ .+|++++.+.+... ++.... .+. +.++++|+||.+ .+..+
T Consensus 23 mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~----~~~~~aDvVilavp~~~~ 94 (220)
T 4huj_A 23 MTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFGASVKA---VEL----KDALQADVVILAVPYDSI 94 (220)
T ss_dssp SCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCH----HHHTTSSEEEEESCGGGH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChH----HHHhcCCEEEEeCChHHH
Confidence 578999995 99999999999999999999 88888776654211 122111 222 336789999977 33344
Q ss_pred HHHHH
Q 024643 176 SNAGS 180 (265)
Q Consensus 176 ~~aa~ 180 (265)
.+++.
T Consensus 95 ~~v~~ 99 (220)
T 4huj_A 95 ADIVT 99 (220)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 44443
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0018 Score=55.57 Aligned_cols=67 Identities=12% Similarity=0.130 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCe-EEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR-IKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~-V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
++|+|.|.|+ |.+|..++..|.+.|++ |.+.+|++++.+.+... ++... .+ +.++++++|+||.+.+
T Consensus 9 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~----~~---~~~~~~~~Dvvi~av~ 77 (266)
T 3d1l_A 9 EDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT----TD---LAEVNPYAKLYIVSLK 77 (266)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE----SC---GGGSCSCCSEEEECCC
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee----CC---HHHHhcCCCEEEEecC
Confidence 3578999998 99999999999999998 88889988766544221 33321 12 2345678999998743
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=96.45 E-value=0.016 Score=52.66 Aligned_cols=88 Identities=14% Similarity=-0.000 Sum_probs=51.9
Q ss_pred CEEEEEcCCcHHHHHHHH-HHHHCC---CeEEEEEeCCc--chhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch
Q 024643 100 DAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~-~Ll~~G---~~V~~~~R~~~--~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~ 173 (265)
|+|.|.||||++|++|++ .|.++. .++..++.+.. +...+.+. +....|..+++. ++++|++|.+.+.
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~--~~~~~~~~~~~~----~~~~Dvvf~a~~~ 74 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKD--AGMLHDAFDIES----LKQLDAVITCQGG 74 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSC--CCBCEETTCHHH----HTTCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCC--ceEEEecCChhH----hccCCEEEECCCh
Confidence 589999999999999999 666655 35665543321 11111111 112223444433 5799999998654
Q ss_pred HH----HHHHHhCCCC-EEEEeccc
Q 024643 174 FI----SNAGSLKGVQ-HVILLSQL 193 (265)
Q Consensus 174 ~~----~~aa~~~gv~-r~V~iSS~ 193 (265)
.. .....++|.+ ++|=.|+.
T Consensus 75 ~~s~~~~~~~~~~G~k~~VID~ss~ 99 (370)
T 3pzr_A 75 SYTEKVYPALRQAGWKGYWIDAAST 99 (370)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECSST
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCch
Confidence 42 2233567774 66666653
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0044 Score=55.58 Aligned_cols=85 Identities=18% Similarity=0.146 Sum_probs=50.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEE--eCCcch-hhh--cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALV--KDKRNA-MES--FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~--R~~~~~-~~~--~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~ 174 (265)
|+|.|.||+|.+|+.+++.|.++++++..+. .+.+.. ..+ .+..+.+...| ++ . + ++|+||.+.+.+
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g~~i~v~~~~---~~---~-~-~~DvV~~a~g~~ 72 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLP---EG---P-L-PVDLVLASAGGG 72 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETTEEEEEEECC---SS---C-C-CCSEEEECSHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcCceEEEEeCC---hh---h-c-CCCEEEECCCcc
Confidence 5799999999999999999998776554332 111110 001 11122222222 22 2 3 899999986543
Q ss_pred H----HHHHHhCCCCEEEEeccc
Q 024643 175 I----SNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 175 ~----~~aa~~~gv~r~V~iSS~ 193 (265)
. .....++|. ++|-.|+.
T Consensus 73 ~s~~~a~~~~~~G~-~vId~s~~ 94 (331)
T 2yv3_A 73 ISRAKALVWAEGGA-LVVDNSSA 94 (331)
T ss_dssp HHHHHHHHHHHTTC-EEEECSSS
T ss_pred chHHHHHHHHHCCC-EEEECCCc
Confidence 2 223345675 67777776
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0026 Score=55.21 Aligned_cols=64 Identities=8% Similarity=-0.082 Sum_probs=46.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+|+|.|.|+ |.+|..++..|.+.|++|++++ ++++.+.+...++.. ..+ +.++++++|+||.+.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g~~~----~~~---~~~~~~~~D~vi~~v 66 (295)
T 1yb4_A 3 AMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVADELLSLGAVN----VET---ARQVTEFADIIFIMV 66 (295)
T ss_dssp -CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTTCBC----CSS---HHHHHHTCSEEEECC
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcCCcc----cCC---HHHHHhcCCEEEEEC
Confidence 478999996 9999999999999999999888 777665544333221 123 445567889988774
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0033 Score=55.16 Aligned_cols=65 Identities=15% Similarity=0.141 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++++|+|+ |+.|+.++..|.+.|. +|+++.|+.++++.+.. .+..+ +.+.+.+ + ++|.||.+
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~-~~~~~-----~~~~l~~-l-~~DivIna 185 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG-EFKVI-----SYDELSN-L-KGDVIINC 185 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT-TSEEE-----EHHHHTT-C-CCSEEEEC
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH-hcCcc-----cHHHHHh-c-cCCEEEEC
Confidence 45789999998 8899999999999998 99999999988776543 23222 2233434 4 78888877
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0078 Score=54.20 Aligned_cols=69 Identities=12% Similarity=0.087 Sum_probs=51.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH-HHHHHHcCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK-FLKTALRGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~-~l~~~~~~~d~vi~~~~ 172 (265)
.++|.|.|. |.+|..+++.|.+.|++|++.+|+++..+.....++.. ..+.+ .+..+.+++|.||++.+
T Consensus 8 ~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~~~----~~~~~e~~~~a~~~aDlVilavP 77 (341)
T 3ktd_A 8 SRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGFDV----SADLEATLQRAAAEDALIVLAVP 77 (341)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTCCE----ESCHHHHHHHHHHTTCEEEECSC
T ss_pred CCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCee----eCCHHHHHHhcccCCCEEEEeCC
Confidence 568999986 99999999999999999999999987665443333322 23443 44555678899998844
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0023 Score=54.51 Aligned_cols=64 Identities=11% Similarity=0.099 Sum_probs=48.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC----eEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT----RIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~----~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+|+|.|.|+ |.+|..+++.|++.|+ +|++.+|++++.+.+.. .++.. ..+ ..++++++|+||.+
T Consensus 2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~---~~e~~~~aDvVila 70 (247)
T 3gt0_A 2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTD---NNEVAKNADILILS 70 (247)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSC---HHHHHHHCSEEEEC
T ss_pred CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCC---hHHHHHhCCEEEEE
Confidence 478999996 9999999999999998 99999999877665421 12322 223 33456678999977
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0012 Score=59.71 Aligned_cols=71 Identities=10% Similarity=-0.006 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhh----hcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~----~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.++||.|+|++|++|+.++..++..| .+|++++.+.++++. +.... +...++.-.....++++++|+||++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--~~~~~i~~t~d~~~al~dADvVvit 83 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--FEGLNLTFTSDIKEALTDAKYIVSS 83 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--CTTCCCEEESCHHHHHTTEEEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--CCCCceEEcCCHHHHhCCCCEEEEc
Confidence 46799999999999999999999998 589999998765432 11100 0001111112345678999999987
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0024 Score=57.40 Aligned_cols=95 Identities=9% Similarity=-0.003 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH-HHHHHHHcCCCEEEEcCc---
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTALRGVRSIICPSE--- 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~-~~l~~~~~~~d~vi~~~~--- 172 (265)
.++.+|+|+|+ |.+|...++.+...|++|+++++++++.+.....+...+ .|..+. +...++..++|++|.+.+
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~~~~~D~vid~~g~~~ 255 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHY-IATLEEGDWGEKYFDTFDLIVVCASSLT 255 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEE-EEGGGTSCHHHHSCSCEEEEEECCSCST
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCEE-EcCcCchHHHHHhhcCCCEEEECCCCCc
Confidence 45789999999 999999999888899999999998877554322122211 244333 323333358999997732
Q ss_pred -hHHHHHHHh-CCCCEEEEeccc
Q 024643 173 -GFISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 173 -~~~~~aa~~-~gv~r~V~iSS~ 193 (265)
..+..+.+. ..-.++|.++..
T Consensus 256 ~~~~~~~~~~l~~~G~iv~~g~~ 278 (360)
T 1piw_A 256 DIDFNIMPKAMKVGGRIVSISIP 278 (360)
T ss_dssp TCCTTTGGGGEEEEEEEEECCCC
T ss_pred HHHHHHHHHHhcCCCEEEEecCC
Confidence 222222211 112478877654
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.40 E-value=0.019 Score=52.44 Aligned_cols=89 Identities=13% Similarity=-0.040 Sum_probs=53.2
Q ss_pred CCEEEEEcCCcHHHHHHHH-HHHHCC---CeEEEEEeCCc--chhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVIL-SLIVKR---TRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~-~Ll~~G---~~V~~~~R~~~--~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
+++|.|.||||++|++|++ .|.++. .++..++.+.. +...+.+. .....|..+++. ++++|+||.+.+
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~--~~~v~~~~~~~~----~~~vDvvf~a~~ 77 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKN--ETTLKDATSIDD----LKKCDVIITCQG 77 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCS--CCBCEETTCHHH----HHTCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCC--ceEEEeCCChhH----hcCCCEEEECCC
Confidence 5799999999999999999 666655 35655543321 11111111 122224445443 468999999865
Q ss_pred hHH----HHHHHhCCCC-EEEEeccc
Q 024643 173 GFI----SNAGSLKGVQ-HVILLSQL 193 (265)
Q Consensus 173 ~~~----~~aa~~~gv~-r~V~iSS~ 193 (265)
... .....++|++ .+|=.|+.
T Consensus 78 ~~~s~~~~~~~~~~G~k~~VID~ss~ 103 (377)
T 3uw3_A 78 GDYTNDVFPKLRAAGWNGYWIDAASS 103 (377)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEECSST
T ss_pred hHHHHHHHHHHHHCCCCEEEEeCCcc
Confidence 442 2234567874 66666654
|
| >1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0018 Score=55.47 Aligned_cols=61 Identities=8% Similarity=0.009 Sum_probs=43.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe--CCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK--DKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R--~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|+ |.+|..++..|++.|++|++.+| +++..+.+...++. .+ ..++++++|+||.+
T Consensus 1 M~I~iIG~-G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~~g~~------~~---~~~~~~~aDvvi~~ 63 (264)
T 1i36_A 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT------ET---SEEDVYSCPVVISA 63 (264)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE------EC---CHHHHHTSSEEEEC
T ss_pred CeEEEEec-hHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHHCCCc------CC---HHHHHhcCCEEEEE
Confidence 57999987 99999999999999999999776 33333333222232 22 33566789999987
|
| >2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.011 Score=55.64 Aligned_cols=66 Identities=18% Similarity=0.139 Sum_probs=50.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-----CccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-----TYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-----~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|+|+ |.+|..++..|++.|++|.+.+|++++.+.+.. .++.. ..+.+.+.+.++++|.||.+
T Consensus 3 m~IgvIG~-G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~----~~~~~e~v~~l~~aDvVila 73 (482)
T 2pgd_A 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLG----AHSLEEMVSKLKKPRRIILL 73 (482)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEE----CSSHHHHHHHBCSSCEEEEC
T ss_pred CeEEEECh-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEE----eCCHHHHHhhccCCCEEEEe
Confidence 67999997 999999999999999999999999887665432 23321 24555444445689999987
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.39 E-value=0.024 Score=50.95 Aligned_cols=95 Identities=14% Similarity=0.035 Sum_probs=61.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCC----H-HHHHHHH-cCCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----K-KFLKTAL-RGVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d----~-~~l~~~~-~~~d~vi~ 169 (265)
.++.+|+|+|+ |.+|...++.+...|. +|+++++++++.+....-++..+ .|..+ . +.+.+.. .++|++|.
T Consensus 191 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid 268 (374)
T 1cdo_A 191 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF-VNPNDHSEPISQVLSKMTNGGVDFSLE 268 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE-EeccccchhHHHHHHHHhCCCCCEEEE
Confidence 45679999996 9999999999988998 89999998877654432233221 34332 2 2333333 26999998
Q ss_pred cCc--hHHHHHHHhC-CC-CEEEEeccc
Q 024643 170 PSE--GFISNAGSLK-GV-QHVILLSQL 193 (265)
Q Consensus 170 ~~~--~~~~~aa~~~-gv-~r~V~iSS~ 193 (265)
+.+ ..+..+.+.. .- .++|.++..
T Consensus 269 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 296 (374)
T 1cdo_A 269 CVGNVGVMRNALESCLKGWGVSVLVGWT 296 (374)
T ss_dssp CSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCCHHHHHHHHHHhhcCCcEEEEEcCC
Confidence 743 3344443332 23 689988764
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0055 Score=47.86 Aligned_cols=83 Identities=7% Similarity=0.099 Sum_probs=52.6
Q ss_pred CCCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-h
Q 024643 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G 173 (265)
Q Consensus 98 ~~~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-~ 173 (265)
..++|.|.|+| |.+|..+++.|++.|++|+.+.++.+.. . ++..+ .++.++.+.+|.++.+.+ .
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i---~--G~~~~-------~s~~el~~~vDlvii~vp~~ 80 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI---E--GLKCY-------RSVRELPKDVDVIVFVVPPK 80 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE---T--TEECB-------SSGGGSCTTCCEEEECSCHH
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE---C--Ceeec-------CCHHHhCCCCCEEEEEeCHH
Confidence 35689999997 8899999999999999876655543221 1 22211 122233457899987733 2
Q ss_pred HHH---HHHHhCCCCEEEEecc
Q 024643 174 FIS---NAGSLKGVQHVILLSQ 192 (265)
Q Consensus 174 ~~~---~aa~~~gv~r~V~iSS 192 (265)
.+. +.+.+.|++.++..++
T Consensus 81 ~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 81 VGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp HHHHHHHHHHHTTCCEEEECTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCc
Confidence 222 2244578888776664
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0047 Score=57.95 Aligned_cols=86 Identities=12% Similarity=0.075 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-C---eEEEEEeCCcchh--hhcCCccEEeeeCCCCHHH-HHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-T---RIKALVKDKRNAM--ESFGTYVESMAGDASNKKF-LKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~---~V~~~~R~~~~~~--~~~~~~v~~i~~D~~d~~~-l~~~~~~~d~vi~~ 170 (265)
-.++|+|.|+ |.||+.+++.|+++. + +|++++.+..... +..+..+..++.|-.|.++ +.+++++.|+||.+
T Consensus 12 ~~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~ 90 (480)
T 2ph5_A 12 FKNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDV 90 (480)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEEC
T ss_pred CCCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEEC
Confidence 3578999996 999999999999875 4 7888887654322 2223333444445556544 55677777999977
Q ss_pred Cc----hHHHHHHHhCCC
Q 024643 171 SE----GFISNAGSLKGV 184 (265)
Q Consensus 171 ~~----~~~~~aa~~~gv 184 (265)
.. --+.++|.++|+
T Consensus 91 s~~~~~l~Im~acleaGv 108 (480)
T 2ph5_A 91 SIGISSLALIILCNQKGA 108 (480)
T ss_dssp CSSSCHHHHHHHHHHHTC
T ss_pred CccccCHHHHHHHHHcCC
Confidence 32 236677888886
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0097 Score=53.23 Aligned_cols=67 Identities=18% Similarity=0.131 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhh----------cCCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~----------~~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
+.|+|.|+|| |.+|..++..|+..|+ +|+++++++++++.. ......+.. .+| +.++++++|.
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d---~~ea~~~aDi 81 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYS---YEAALTGADC 81 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECS---HHHHHTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE--eCC---HHHHhCCCCE
Confidence 3579999999 9999999999999998 999999998765431 011111111 033 4457899999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
||.+
T Consensus 82 Vi~a 85 (331)
T 1pzg_A 82 VIVT 85 (331)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9977
|
| >3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A | Back alignment and structure |
|---|
Probab=96.36 E-value=0.012 Score=52.36 Aligned_cols=65 Identities=18% Similarity=0.152 Sum_probs=51.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|...|++|++.+|+....+ .+.... ..+++.++++.+|+|+++
T Consensus 136 ~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~-----~~~~~~----~~~~l~ell~~aDiV~l~ 200 (315)
T 3pp8_A 136 TREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWP-----GVESYV----GREELRAFLNQTRVLINL 200 (315)
T ss_dssp CSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCT-----TCEEEE----SHHHHHHHHHTCSEEEEC
T ss_pred CcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhh-----hhhhhc----ccCCHHHHHhhCCEEEEe
Confidence 456889999998 99999999999999999999999876432 222221 236788999999999976
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.021 Score=48.29 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+..+++|||.|| |.+|...++.|++.|++|++++.+... ...+ ....++++..++.+ ..+.++|.||.++
T Consensus 28 ~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~-----~dL~~adLVIaAT 99 (223)
T 3dfz_A 28 DLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE-----EDLLNVFFIVVAT 99 (223)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG-----GGSSSCSEEEECC
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH-----hHhCCCCEEEECC
Confidence 566889999999 899999999999999999999876542 2222 23467888777754 2367899999773
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0012 Score=57.73 Aligned_cols=33 Identities=12% Similarity=0.272 Sum_probs=27.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEe
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK 131 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R 131 (265)
+|+|+|+|++|.+|+.+++.+.+ .|++++++.+
T Consensus 5 ~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d 38 (273)
T 1dih_A 5 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALE 38 (273)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEEC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 47999999999999999999875 5688885543
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0033 Score=56.88 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--C------CccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--G------TYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~------~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
..|+|.|.|+ |.+|..++..|++.|++|++.+|++++.+.+. + +++.. ...+.-..++.++++++|.||.
T Consensus 28 ~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 28 FKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCEEEE
T ss_pred cCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCEEEE
Confidence 3578999998 99999999999999999999999987654432 1 11110 0001001234567889999998
Q ss_pred cCc
Q 024643 170 PSE 172 (265)
Q Consensus 170 ~~~ 172 (265)
+.+
T Consensus 106 aVp 108 (356)
T 3k96_A 106 VVP 108 (356)
T ss_dssp CCC
T ss_pred CCC
Confidence 844
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=96.31 E-value=0.013 Score=52.73 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCC----H-HHHHHHH-cCCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----K-KFLKTAL-RGVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d----~-~~l~~~~-~~~d~vi~ 169 (265)
.++.+|+|+|+ |.+|...++.+...|. +|+++++++++.+....-++..+ .|..+ . +.+.+.. .++|++|.
T Consensus 190 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~~~~g~D~vid 267 (374)
T 2jhf_A 190 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC-VNPQDYKKPIQEVLTEMSNGGVDFSFE 267 (374)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHTTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE-ecccccchhHHHHHHHHhCCCCcEEEE
Confidence 45679999996 9999999999989998 89999998877654432233221 34332 2 2333332 26999997
Q ss_pred cCc--hHHHHHHHh-CCC-CEEEEeccc
Q 024643 170 PSE--GFISNAGSL-KGV-QHVILLSQL 193 (265)
Q Consensus 170 ~~~--~~~~~aa~~-~gv-~r~V~iSS~ 193 (265)
+.+ ..+..+.+. ..- .++|.++..
T Consensus 268 ~~g~~~~~~~~~~~l~~~~G~iv~~G~~ 295 (374)
T 2jhf_A 268 VIGRLDTMVTALSCCQEAYGVSVIVGVP 295 (374)
T ss_dssp CSCCHHHHHHHHHHBCTTTCEEEECSCC
T ss_pred CCCCHHHHHHHHHHhhcCCcEEEEeccC
Confidence 733 334444333 223 588888754
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0063 Score=54.57 Aligned_cols=92 Identities=11% Similarity=-0.024 Sum_probs=60.1
Q ss_pred CEEEEEcCCcHHHHHH-HHHH-HHCCCe-EEEEEeCCc---chhhhcCCccEEeeeCCCCHH--HHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMV-ILSL-IVKRTR-IKALVKDKR---NAMESFGTYVESMAGDASNKK--FLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l-~~~L-l~~G~~-V~~~~R~~~---~~~~~~~~~v~~i~~D~~d~~--~l~~~~~~~d~vi~~~ 171 (265)
.+|+|+|| |.+|... ++.+ ...|.+ |++++++++ +.+....-+++.+ |..+.+ .+.+.-.++|++|.+.
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v--~~~~~~~~~i~~~~gg~Dvvid~~ 250 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV--DSRQTPVEDVPDVYEQMDFIYEAT 250 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE--ETTTSCGGGHHHHSCCEEEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc--CCCccCHHHHHHhCCCCCEEEECC
Confidence 79999999 9999999 8777 678987 999999887 6654443445555 554321 2444412689999773
Q ss_pred c-h-HHHHHHHh-CCCCEEEEecccc
Q 024643 172 E-G-FISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 172 ~-~-~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+ . .+..+.+. ..-.++|.++...
T Consensus 251 g~~~~~~~~~~~l~~~G~iv~~g~~~ 276 (357)
T 2b5w_A 251 GFPKHAIQSVQALAPNGVGALLGVPS 276 (357)
T ss_dssp CCHHHHHHHHHHEEEEEEEEECCCCC
T ss_pred CChHHHHHHHHHHhcCCEEEEEeCCC
Confidence 3 2 33333332 1224888887654
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.012 Score=53.00 Aligned_cols=88 Identities=15% Similarity=0.128 Sum_probs=52.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcchhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~ 174 (265)
+++|.|.||||++|.+|++.|.++.+ ++..+....+.-..+ +. +.+...-|+.+ +.++++|+||.+.+..
T Consensus 1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~~~-~~~~~~~~~~~-----~~~~~~Dvvf~a~~~~ 74 (344)
T 3tz6_A 1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLAFR-GQEIEVEDAET-----ADPSGLDIALFSAGSA 74 (344)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEEET-TEEEEEEETTT-----SCCTTCSEEEECSCHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCceeec-CCceEEEeCCH-----HHhccCCEEEECCChH
Confidence 36899999999999999999888754 455554322211111 11 11222222222 2357899999886543
Q ss_pred H----HHHHHhCCCCEEEEeccc
Q 024643 175 I----SNAGSLKGVQHVILLSQL 193 (265)
Q Consensus 175 ~----~~aa~~~gv~r~V~iSS~ 193 (265)
. .....++|+ ++|-.|+.
T Consensus 75 ~s~~~a~~~~~~G~-~vID~Sa~ 96 (344)
T 3tz6_A 75 MSKVQAPRFAAAGV-TVIDNSSA 96 (344)
T ss_dssp HHHHHHHHHHHTTC-EEEECSST
T ss_pred HHHHHHHHHHhCCC-EEEECCCc
Confidence 2 222345676 57777775
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.027 Score=50.66 Aligned_cols=94 Identities=10% Similarity=-0.012 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCC----H-HHHHHHH-cCCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN----K-KFLKTAL-RGVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d----~-~~l~~~~-~~~d~vi~ 169 (265)
.++.+|+|+|+ |.+|...++.+...|. +|+++++++++.+....-++..+ .|..+ . +.+.+.. .++|++|.
T Consensus 194 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~v~~~~~~g~Dvvid 271 (376)
T 1e3i_A 194 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC-LNPRELDKPVQDVITELTAGGVDYSLD 271 (376)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE-ECGGGCSSCHHHHHHHHHTSCBSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCcEE-EccccccchHHHHHHHHhCCCccEEEE
Confidence 45679999996 9999999998888998 89999998877654432233221 23332 2 2333333 36999998
Q ss_pred cCc--hHHHHHHHhC-CC-CEEEEecc
Q 024643 170 PSE--GFISNAGSLK-GV-QHVILLSQ 192 (265)
Q Consensus 170 ~~~--~~~~~aa~~~-gv-~r~V~iSS 192 (265)
+.+ ..+..+.+.. .- .++|.++.
T Consensus 272 ~~G~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 272 CAGTAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SSCCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCCHHHHHHHHHHhhcCCCEEEEECC
Confidence 743 3344444432 23 58988875
|
| >2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0058 Score=54.23 Aligned_cols=65 Identities=9% Similarity=-0.004 Sum_probs=47.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeCCc--chhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKR--NAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G----~~V~~~~R~~~--~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..|+|.|.|+ |.+|..++..|++.| ++|++.+|+++ +.+.+...++.+. .+ ..++++++|+||.+
T Consensus 21 ~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~----~~---~~e~~~~aDvVila 91 (322)
T 2izz_A 21 QSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLT----PH---NKETVQHSDVLFLA 91 (322)
T ss_dssp -CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE----SC---HHHHHHHCSEEEEC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcCCEEe----CC---hHHHhccCCEEEEE
Confidence 3578999998 999999999999999 89999999875 5444432233321 12 23456678999987
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.027 Score=50.72 Aligned_cols=95 Identities=14% Similarity=-0.011 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH-cCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL-RGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~-~~~d~vi~~~~ 172 (265)
.++.+|+|+||+|.+|...++.+...|++|+++. ++++.+....-+... ..|..+. +.+.+.. .++|++|-+.+
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~~-vi~~~~~~~~~~v~~~t~g~~d~v~d~~g 240 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGAEE-VFDYRAPNLAQTIRTYTKNNLRYALDCIT 240 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCSE-EEETTSTTHHHHHHHHTTTCCCEEEESSC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCCcE-EEECCCchHHHHHHHHccCCccEEEECCC
Confidence 5678999999999999999999999999999886 565554332223322 1344433 2344433 24899997733
Q ss_pred --hHHHHHHHhC--CCCEEEEeccc
Q 024643 173 --GFISNAGSLK--GVQHVILLSQL 193 (265)
Q Consensus 173 --~~~~~aa~~~--gv~r~V~iSS~ 193 (265)
..+..+.... .-.++|.++..
T Consensus 241 ~~~~~~~~~~~l~~~~G~iv~~g~~ 265 (371)
T 3gqv_A 241 NVESTTFCFAAIGRAGGHYVSLNPF 265 (371)
T ss_dssp SHHHHHHHHHHSCTTCEEEEESSCC
T ss_pred chHHHHHHHHHhhcCCCEEEEEecC
Confidence 3333333322 34689888743
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0077 Score=56.18 Aligned_cols=71 Identities=10% Similarity=0.041 Sum_probs=50.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEee-------------eCCCCHHHHHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMA-------------GDASNKKFLKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~-------------~D~~d~~~l~~~~~~~d 165 (265)
..+|.|.|. |++|..++..|++.||+|++.+|++++.+.+......+.. +.+.=..++.++++++|
T Consensus 8 ~~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 8 SVRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred ceEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 457999998 9999999999999999999999999887766432111100 00100113456788999
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
++|.+
T Consensus 87 vvii~ 91 (446)
T 4a7p_A 87 AVFIA 91 (446)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 99977
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.01 Score=55.99 Aligned_cols=89 Identities=11% Similarity=0.093 Sum_probs=60.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC--ch
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EG 173 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~--~~ 173 (265)
...+++|+|.|+ |.||+.+++.|...|++|+++++++.+.......+++. .+. .++++++|+||.+. ..
T Consensus 271 ~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~Ga~~-----~~l---~e~l~~aDvVi~atgt~~ 341 (494)
T 3ce6_A 271 LIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEGFDV-----VTV---EEAIGDADIVVTATGNKD 341 (494)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE-----CCH---HHHGGGCSEEEECSSSSC
T ss_pred CCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCEE-----ecH---HHHHhCCCEEEECCCCHH
Confidence 346789999997 99999999999999999999999887654333234432 232 34578999999772 22
Q ss_pred HHH-HHHHhC-CCCEEEEeccc
Q 024643 174 FIS-NAGSLK-GVQHVILLSQL 193 (265)
Q Consensus 174 ~~~-~aa~~~-gv~r~V~iSS~ 193 (265)
.+. ..+... .-.+++.++..
T Consensus 342 ~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 342 IIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp SBCHHHHHHSCTTCEEEECSSS
T ss_pred HHHHHHHHhcCCCcEEEEeCCC
Confidence 222 222222 22467777764
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.0037 Score=54.29 Aligned_cols=69 Identities=14% Similarity=0.119 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc---CCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF---GTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~---~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
..+++++|+|+ |++|+.++..|++.|++|++..|+.++++.+. +....+...|+ +.+.+ .++|.+|.++
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~~--~~~DivIn~t 188 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIPL--QTYDLVINAT 188 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCCC--SCCSEEEECC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhcc--CCCCEEEECC
Confidence 45689999998 88999999999999999999999987765442 11001112232 11110 3789999873
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.00079 Score=60.55 Aligned_cols=68 Identities=16% Similarity=0.066 Sum_probs=45.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--e-----EEEEEeCCc--chh----hhcC---CccEEeeeCCCCHHHHHHHHc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--R-----IKALVKDKR--NAM----ESFG---TYVESMAGDASNKKFLKTALR 162 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~-----V~~~~R~~~--~~~----~~~~---~~v~~i~~D~~d~~~l~~~~~ 162 (265)
.++|+||||+|+||+.++..|+..|. + ++++++++. +++ ++.+ +... ++.......+.++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~----~~~~~~~~~~~~~ 78 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLK----DVIATDKEEIAFK 78 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEE----EEEEESCHHHHTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccC----CEEEcCCcHHHhC
Confidence 36899999999999999999998874 4 888888642 221 1211 1111 1211123456789
Q ss_pred CCCEEEEc
Q 024643 163 GVRSIICP 170 (265)
Q Consensus 163 ~~d~vi~~ 170 (265)
++|+||++
T Consensus 79 daDvVvit 86 (333)
T 5mdh_A 79 DLDVAILV 86 (333)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEe
Confidence 99999987
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.017 Score=52.17 Aligned_cols=96 Identities=11% Similarity=0.009 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCC----C-HHHHHHHH-cCCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDAS----N-KKFLKTAL-RGVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~----d-~~~l~~~~-~~~d~vi 168 (265)
..++.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+....-++..+ .|.. + .+.+.+.. .++|++|
T Consensus 191 ~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v-i~~~~~~~~~~~~i~~~~~gg~D~vi 268 (378)
T 3uko_A 191 VEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF-VNPKDHDKPIQEVIVDLTDGGVDYSF 268 (378)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEE-ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEE-EccccCchhHHHHHHHhcCCCCCEEE
Confidence 345678999998 9999999999888998 89999998887765544343322 2332 2 23344333 2699999
Q ss_pred EcCc--hHHHHHHHhCC--CCEEEEeccc
Q 024643 169 CPSE--GFISNAGSLKG--VQHVILLSQL 193 (265)
Q Consensus 169 ~~~~--~~~~~aa~~~g--v~r~V~iSS~ 193 (265)
.+.+ ..+..+.+... -.+++.++..
T Consensus 269 d~~g~~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 269 ECIGNVSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp ECSCCHHHHHHHHHTBCTTTCEEEECSCC
T ss_pred ECCCCHHHHHHHHHHhhccCCEEEEEccc
Confidence 7733 34444444333 3689988764
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.23 E-value=0.0097 Score=53.09 Aligned_cols=75 Identities=8% Similarity=-0.031 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch----hhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA----MESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~----~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++++|.|++.-+|+.+++.|+..|.+|+++.|+..+. ..+............++++.+.+.+..+|+||.+
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsA 252 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG 252 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEEC
Confidence 56789999999977889999999999999999998874332 1111100111111114457899999999999988
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.22 E-value=0.0097 Score=52.78 Aligned_cols=67 Identities=10% Similarity=0.009 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhhcCCccE-EeeeCCCCHHHHHH-HHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVE-SMAGDASNKKFLKT-ALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~v~-~i~~D~~d~~~l~~-~~~~~d~vi~~~ 171 (265)
..|+|.|.|+ |.+|..+++.|.+.|+ +|++.+|++++.+.....++. ... .+ +.+ +++++|.||.+.
T Consensus 32 ~~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~---~~---~~~~~~~~aDvVilav 102 (314)
T 3ggo_A 32 SMQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT---TS---IAKVEDFSPDFVMLSS 102 (314)
T ss_dssp SCSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE---SC---TTGGGGGCCSEEEECS
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc---CC---HHHHhhccCCEEEEeC
Confidence 4579999995 9999999999999999 999999998765544322221 111 12 234 678899999873
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0076 Score=51.86 Aligned_cols=66 Identities=9% Similarity=0.010 Sum_probs=46.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC---CccEE-eeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG---TYVES-MAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~---~~v~~-i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|+ |.+|..++..|.+.|++|++++|++++.+.+.. .+..+ ......+. +.++++|.||.+
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~d~vi~~ 70 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVT 70 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEEC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCc----cccCCCCEEEEE
Confidence 58999999 999999999999999999999998866543311 01110 11111232 345789999988
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0019 Score=55.88 Aligned_cols=62 Identities=11% Similarity=-0.009 Sum_probs=45.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|.|+ |.+|..++..|.+ |++|++++|++++.+.+...++... + +.++++++|+||.+.
T Consensus 2 ~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~--~------~~~~~~~~D~vi~~v 63 (289)
T 2cvz_A 2 EKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEA--V------PLERVAEARVIFTCL 63 (289)
T ss_dssp CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEE--C------CGGGGGGCSEEEECC
T ss_pred CeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCccc--C------HHHHHhCCCEEEEeC
Confidence 67999987 9999999999999 9999999999877654432222221 1 234567889988773
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0052 Score=54.77 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCcchhhhcCCccEEeeeCCCC-HHHHHHHHc--CCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALR--GVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d-~~~l~~~~~--~~d~vi~~~~ 172 (265)
++.+|+|+|+ |.+|...++.+... |++|+++++++++.+.....+...+ .|..+ .+.+.++.. ++|++|.+.+
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~g~g~D~vid~~g 247 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADYV-SEMKDAESLINKLTDGLGASIAIDLVG 247 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSEE-ECHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCEE-eccccchHHHHHhhcCCCccEEEECCC
Confidence 5789999999 99999999988888 9999999988876543322122211 24333 333333332 6899998733
Q ss_pred -h-HHHHHHHh-CCCCEEEEeccc
Q 024643 173 -G-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 173 -~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
. .+..+.+. ..-.++|.++..
T Consensus 248 ~~~~~~~~~~~l~~~G~iv~~g~~ 271 (344)
T 2h6e_A 248 TEETTYNLGKLLAQEGAIILVGME 271 (344)
T ss_dssp CHHHHHHHHHHEEEEEEEEECCCC
T ss_pred ChHHHHHHHHHhhcCCEEEEeCCC
Confidence 2 33333322 222488887754
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.18 E-value=0.013 Score=53.05 Aligned_cols=96 Identities=6% Similarity=-0.010 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCC---CHH---HHHHHHc--CCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDAS---NKK---FLKTALR--GVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~---d~~---~l~~~~~--~~d~v 167 (265)
.++.+|+|+| +|.+|...++.+...| .+|+++++++++.+.....+...+ .|.. +.+ .+.+... ++|++
T Consensus 194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~v~~~~~g~g~Dvv 271 (380)
T 1vj0_A 194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEERRKAIMDITHGRGADFI 271 (380)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEE-EeccccCcchHHHHHHHHhCCCCCcEE
Confidence 4578999999 7999999999998999 699999998877654432233221 3443 222 2333332 68999
Q ss_pred EEcCc--hHHHHHHHh-CCCCEEEEecccc
Q 024643 168 ICPSE--GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 168 i~~~~--~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
|.+.+ ..+..+.+. ..-.++|.++...
T Consensus 272 id~~g~~~~~~~~~~~l~~~G~iv~~G~~~ 301 (380)
T 1vj0_A 272 LEATGDSRALLEGSELLRRGGFYSVAGVAV 301 (380)
T ss_dssp EECSSCTTHHHHHHHHEEEEEEEEECCCCS
T ss_pred EECCCCHHHHHHHHHHHhcCCEEEEEecCC
Confidence 97732 334333332 2225888887643
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0089 Score=53.97 Aligned_cols=96 Identities=16% Similarity=0.158 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
.++.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+....-++.. ..|..+.+....+.+ ++|++|
T Consensus 181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~i~~~~~~~~gg~Dvvi 258 (370)
T 4ej6_A 181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA-TVDPSAGDVVEAIAGPVGLVPGGVDVVI 258 (370)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE-EECTTSSCHHHHHHSTTSSSTTCEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE-EECCCCcCHHHHHHhhhhccCCCCCEEE
Confidence 45789999998 9999999999999998 8888888877654332222221 234444333333322 689999
Q ss_pred EcCc--hHHHHHHHh-CCCCEEEEecccc
Q 024643 169 CPSE--GFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 169 ~~~~--~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
.+.+ ..+..+.+. ..-.++|.++...
T Consensus 259 d~~G~~~~~~~~~~~l~~~G~vv~~G~~~ 287 (370)
T 4ej6_A 259 ECAGVAETVKQSTRLAKAGGTVVILGVLP 287 (370)
T ss_dssp ECSCCHHHHHHHHHHEEEEEEEEECSCCC
T ss_pred ECCCCHHHHHHHHHHhccCCEEEEEeccC
Confidence 7733 333333332 2235888887543
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0082 Score=53.16 Aligned_cols=65 Identities=12% Similarity=-0.028 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|...|++|++.+|+.++. .....+++. .+ +.++++.+|+|+++
T Consensus 139 ~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~~g~~~-----~~---l~ell~~aDvV~l~ 203 (307)
T 1wwk_A 139 ELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNEE-RAKEVNGKF-----VD---LETLLKESDVVTIH 203 (307)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHTTCEE-----CC---HHHHHHHCSEEEEC
T ss_pred ccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHhhcCccc-----cC---HHHHHhhCCEEEEe
Confidence 456789999987 9999999999999999999999987652 122223332 13 45677889999976
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0092 Score=53.25 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=59.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC--HHHHHHHH-cCCCEEEEcCch-
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN--KKFLKTAL-RGVRSIICPSEG- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d--~~~l~~~~-~~~d~vi~~~~~- 173 (265)
++.+|+|+||+|.+|...++.+...|++|+++++++++.+.....+...+ .|..+ .+.+.+.- .++|++|.+.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~g~Dvv~d~~g~~ 228 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIV-LNHKESLLNQFKTQGIELVDYVFCTFNTD 228 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSEE-ECTTSCHHHHHHHHTCCCEEEEEESSCHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEE-EECCccHHHHHHHhCCCCccEEEECCCch
Confidence 67899999999999999999999999999999998876554322222221 23322 23333331 368999987432
Q ss_pred H-HHHHHHh-CCCCEEEEecc
Q 024643 174 F-ISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 174 ~-~~~aa~~-~gv~r~V~iSS 192 (265)
. +..+.+. +.-.++|.+++
T Consensus 229 ~~~~~~~~~l~~~G~iv~~~~ 249 (346)
T 3fbg_A 229 MYYDDMIQLVKPRGHIATIVA 249 (346)
T ss_dssp HHHHHHHHHEEEEEEEEESSC
T ss_pred HHHHHHHHHhccCCEEEEECC
Confidence 2 2333222 22257877654
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.16 E-value=0.0066 Score=54.89 Aligned_cols=68 Identities=10% Similarity=-0.006 Sum_probs=50.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....+++|.|.|. |.||+.+++.|...|++|++.+|+....+.....+++.+ +++.++++.+|+|+++
T Consensus 160 ~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~~aDvV~l~ 227 (351)
T 3jtm_A 160 YDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETGAKFV-------EDLNEMLPKCDVIVIN 227 (351)
T ss_dssp CCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGGGCSEEEEC
T ss_pred ccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHhcCCEEEEC
Confidence 3567899999998 999999999999999999999988644332211123221 2466788899999866
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 265 | ||||
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 8e-05 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.4 bits (93), Expect = 8e-05
Identities = 17/155 (10%), Positives = 39/155 (25%), Gaps = 16/155 (10%)
Query: 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161
+ + G + + + LV+D + GD + +
Sbjct: 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTV 65
Query: 162 RGVRSIIC------PSEGFISN---------AGSLKGVQHVILLSQLSVYRGSGGIQALM 206
G ++I A GV V+ + + + +
Sbjct: 66 AGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRL 125
Query: 207 KGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPG 241
+ +L SG+ Y + + + P
Sbjct: 126 QAVTDDHIRM-HKVLRESGLKYVAVMPPHIGDQPL 159
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 265 | |||
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.92 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.8 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.75 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.73 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.72 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.72 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.72 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.71 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.69 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.67 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.67 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.66 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.66 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.65 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.63 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.62 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.62 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.62 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.62 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.61 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.6 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.59 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.59 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.58 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.58 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.58 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.57 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.56 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.56 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.56 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.56 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.56 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.55 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.55 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.55 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.54 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.54 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.54 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.54 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.54 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.54 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.53 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.53 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.52 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.51 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.51 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.5 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.5 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.5 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.5 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.49 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.49 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.49 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.48 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.48 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.48 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.47 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.47 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.46 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.46 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.45 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.45 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.45 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.43 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.43 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.41 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.41 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.4 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.4 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.38 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.38 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.37 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.37 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.36 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.34 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.33 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.33 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.32 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.31 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.3 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.3 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.27 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.26 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.17 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.14 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.08 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.08 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.08 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.07 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.02 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.99 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 98.97 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 98.94 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 98.84 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.78 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 98.7 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.6 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 98.33 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.19 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.11 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.98 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.94 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.83 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.83 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.74 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.71 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.7 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.69 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.66 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.62 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.58 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.57 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.54 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.54 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.48 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.47 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.44 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.42 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.42 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.32 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.32 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.27 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.26 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.21 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.19 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.19 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.15 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.15 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.14 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.11 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.11 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.09 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.08 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.07 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.04 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.04 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.02 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 96.96 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.89 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.86 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.86 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.84 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.79 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.79 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 96.71 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.67 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.65 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.6 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 96.56 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.52 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 96.41 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.4 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.32 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 96.31 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.27 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.23 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.22 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.21 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 96.2 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 96.19 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 96.14 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.14 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.06 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 96.03 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.01 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.01 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 95.98 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 95.97 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.84 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 95.78 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 95.78 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.77 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 95.77 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 95.74 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 95.7 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 95.68 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.67 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 95.63 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 95.63 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 95.61 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.59 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 95.58 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.56 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 95.55 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 95.54 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 95.52 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.49 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.45 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 95.43 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 95.41 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.38 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 95.36 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.35 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 95.32 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 95.31 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 95.31 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.29 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.28 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.26 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.24 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.24 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.23 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.2 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.16 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.08 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 95.02 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 94.99 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.81 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.81 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 94.69 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.66 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.59 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 94.56 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.53 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.52 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 94.5 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.47 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 94.46 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.45 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.45 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.41 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.41 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.1 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 94.03 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.99 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.88 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 93.86 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 93.78 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 93.76 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.74 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 93.59 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.55 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.55 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 93.48 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 93.26 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 93.25 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 93.12 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.98 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 92.96 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 92.92 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 92.88 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.86 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 92.34 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 92.32 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 92.19 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.18 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.16 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 92.09 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.96 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 91.55 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 91.46 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 91.41 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.38 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 91.3 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 91.22 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 91.05 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 91.02 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 90.77 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 90.7 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 90.69 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.61 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 90.48 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 90.45 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 90.39 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 90.25 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 90.22 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 90.04 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 89.94 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 89.94 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 89.77 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 89.71 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 89.45 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.44 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 89.13 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 88.98 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 88.91 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 88.84 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 88.25 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 87.53 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 87.44 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 87.22 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 87.13 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 87.08 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 86.97 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 86.93 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 86.74 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 86.56 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 86.29 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 86.17 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 85.72 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 85.44 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 84.62 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 84.37 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 83.84 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 83.81 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 83.34 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 83.07 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 82.74 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 82.69 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 82.62 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 82.39 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 82.37 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 82.06 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 82.04 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 81.96 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 81.22 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=2.6e-24 Score=179.75 Aligned_cols=146 Identities=13% Similarity=0.125 Sum_probs=121.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE----- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~----- 172 (265)
.++||+||||||+||++++++|+++||+|++++|++++.......+++++.+|+.|.+++.++++++|+||++.+
T Consensus 2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~ 81 (205)
T d1hdoa_ 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (205)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence 468899999999999999999999999999999999887766677899999999999999999999999998721
Q ss_pred ----------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccCCCCC
Q 024643 173 ----------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQNTPGG 242 (265)
Q Consensus 173 ----------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~~~~~ 242 (265)
..+.+++++++++|||++||.+++.......+. ...++..|..+|+++++++++||+|||+++.+.+..
T Consensus 82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~-~~~~~~~~~~~e~~l~~~~~~~tiirp~~~~~~~~~ 160 (205)
T d1hdoa_ 82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPR-LQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLT 160 (205)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGG-GHHHHHHHHHHHHHHHHTCSEEEEECCSEEECCCCC
T ss_pred hhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccCCCcccccc-ccccchHHHHHHHHHHhcCCceEEEecceecCCCCc
Confidence 125567889999999999998887654332222 223456788899999999999999999998776655
Q ss_pred cc
Q 024643 243 KQ 244 (265)
Q Consensus 243 ~~ 244 (265)
..
T Consensus 161 ~~ 162 (205)
T d1hdoa_ 161 GA 162 (205)
T ss_dssp SC
T ss_pred cc
Confidence 43
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.9e-19 Score=152.72 Aligned_cols=136 Identities=15% Similarity=0.173 Sum_probs=110.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~- 173 (265)
..+++|+||||||+||++++++|+++| ++|++++|++.+........++...+|+.+.+.+.++++++|++|++...
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~ 91 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT 91 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccccccccccccccccccccccccc
Confidence 356789999999999999999999999 48999999876654444567888999999999999999999999987210
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCC-EEEEeCC
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 234 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~-~tivRPg 234 (265)
.+.++|.+.++++||++|+.+++.... ..+...|..+|+++.+.+++ ++|+|||
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~~~-------~~Y~~~K~~~E~~l~~~~~~~~~IlRP~ 164 (232)
T d2bkaa1 92 RGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSSN-------FLYLQVKGEVEAKVEELKFDRYSVFRPG 164 (232)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS-------SHHHHHHHHHHHHHHTTCCSEEEEEECC
T ss_pred ccccchhhhhhhcccccceeeecccccCccccccCCccccccCcc-------chhHHHHHHhhhccccccccceEEecCc
Confidence 144557889999999999998875442 12345788999999999986 9999999
Q ss_pred CccCC
Q 024643 235 VLQNT 239 (265)
Q Consensus 235 ~l~~~ 239 (265)
.+.+.
T Consensus 165 ~i~G~ 169 (232)
T d2bkaa1 165 VLLCD 169 (232)
T ss_dssp EEECT
T ss_pred eeecC
Confidence 87543
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.75 E-value=1.5e-17 Score=148.86 Aligned_cols=143 Identities=14% Similarity=0.016 Sum_probs=107.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc---
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE--- 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~--- 172 (265)
+...|+|||||||||||++|+++|+++||+|++++|.............++..+|+.|.+.+.++++++|.||++..
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~ 91 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMG 91 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccccc
Confidence 34689999999999999999999999999999998765432222234568889999999999999999999998621
Q ss_pred -h-------------------HHHHHHHhCCCCEEEEecccccccCCCCc------------ccccchhHH-HHHHHHHH
Q 024643 173 -G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------------QALMKGNAR-KLAEQDES 219 (265)
Q Consensus 173 -~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------------~~~~~~~~~-~~k~~~E~ 219 (265)
. .+.+++++.+++|||++||..++...... .+..+...| ..|..+|+
T Consensus 92 ~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~ 171 (363)
T d2c5aa1 92 GMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEE 171 (363)
T ss_dssp CHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHH
T ss_pred cccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHH
Confidence 0 13455778999999999999887643211 111122233 47888888
Q ss_pred HHHh----CCCCEEEEeCCCccC
Q 024643 220 MLMA----SGIPYTIIRTGVLQN 238 (265)
Q Consensus 220 ~l~~----~gl~~tivRPg~l~~ 238 (265)
+++. .|++++++||+.+..
T Consensus 172 ~~~~~~~~~gl~~~ilR~~~vyG 194 (363)
T d2c5aa1 172 LCKHYNKDFGIECRIGRFHNIYG 194 (363)
T ss_dssp HHHHHHHHHCCEEEEEEECCEEC
T ss_pred HHHHHHHHhCCCEEEEEeeeEec
Confidence 7653 699999999997643
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.73 E-value=3.7e-17 Score=145.26 Aligned_cols=138 Identities=20% Similarity=0.169 Sum_probs=104.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-------hhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-------~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|+|||||||||||++|++.|+++|++|++++|-... .+.....+++++++|++|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 789999999999999999999999999999873321 122345689999999999999999997 78999987
Q ss_pred Cc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCc------ccccchhH-HHHHHHHHHHH
Q 024643 171 SE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------QALMKGNA-RKLAEQDESML 221 (265)
Q Consensus 171 ~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------~~~~~~~~-~~~k~~~E~~l 221 (265)
.. . .+.+++++.++++||++||..+|...... ....+... ...|...|..+
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~ 160 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL 160 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHH
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHH
Confidence 21 1 13445778899999999999998543221 11122222 34777777776
Q ss_pred Hh-----CCCCEEEEeCCCcc
Q 024643 222 MA-----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~~-----~gl~~tivRPg~l~ 237 (265)
.+ .+++++++||+.+.
T Consensus 161 ~~~~~~~~~~~~~ilR~~~v~ 181 (338)
T d1udca_ 161 TDLQKAQPDWSIALLRYFNPV 181 (338)
T ss_dssp HHHHHHSTTCEEEEEEECEEE
T ss_pred HHHHhhccCCeEEEEeeccEE
Confidence 53 58999999999754
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.72 E-value=7.7e-17 Score=133.83 Aligned_cols=145 Identities=26% Similarity=0.407 Sum_probs=111.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCe--EEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch--
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTR--IKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG-- 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~--V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~-- 173 (265)
.+++||||||||+||++++++|+++|++ |+.+.|++++...+ ..+++++.+|+.|.+.+.++++++|+||++...
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~~ 80 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAVP 80 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc-cCCcEEEEeeeccccccccccccceeeEEEEeecc
Confidence 4689999999999999999999999965 66677887765543 457899999999999999999999999987110
Q ss_pred ---------------------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 174 ---------------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 174 ---------------------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
.+...+.....+++.+.|+...+.+..+............+...+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (252)
T d2q46a1 81 KMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQY 160 (252)
T ss_dssp EECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHH
T ss_pred ccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhh
Confidence 02233556778899999988877655444444334444566677888
Q ss_pred HHhCCCCEEEEeCCCccCCCCCc
Q 024643 221 LMASGIPYTIIRTGVLQNTPGGK 243 (265)
Q Consensus 221 l~~~gl~~tivRPg~l~~~~~~~ 243 (265)
...++++++++||+++.+.....
T Consensus 161 ~~~~~~~~~ilRp~~v~g~~~~~ 183 (252)
T d2q46a1 161 LADSGTPYTIIRAGGLLDKEGGV 183 (252)
T ss_dssp HHHSSSCEEEEEECEEECSCTTS
T ss_pred hhcccccceeecceEEECCCcch
Confidence 88899999999999976655443
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=2.9e-17 Score=147.34 Aligned_cols=137 Identities=12% Similarity=0.011 Sum_probs=98.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-----chhhh------cCCccEEeeeCCCCHHHHHHHHcCC--CE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAMES------FGTYVESMAGDASNKKFLKTALRGV--RS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-----~~~~~------~~~~v~~i~~D~~d~~~l~~~~~~~--d~ 166 (265)
|+|||||||||||++|+++|+++|++|++++|... +.+.+ ...+++++++|++|.+++.++++++ |+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 67899999999999999999999999999998542 22211 2357899999999999999999865 99
Q ss_pred EEEcCc----h------------------HHHHHHHhCCC---CEEEEecccccccCCCC--c---ccccchhHH-HHHH
Q 024643 167 IICPSE----G------------------FISNAGSLKGV---QHVILLSQLSVYRGSGG--I---QALMKGNAR-KLAE 215 (265)
Q Consensus 167 vi~~~~----~------------------~~~~aa~~~gv---~r~V~iSS~~v~~~~~~--~---~~~~~~~~~-~~k~ 215 (265)
||++.. . .+.++|+..++ .||||+||..+|+.... . .+..+...| ..|.
T Consensus 82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~ 161 (357)
T d1db3a_ 82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKL 161 (357)
T ss_dssp EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHH
T ss_pred EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHH
Confidence 998711 0 13455666554 48999999999854311 1 122233334 4788
Q ss_pred HHHHHHHh----CCCCEEEEeCCCc
Q 024643 216 QDESMLMA----SGIPYTIIRTGVL 236 (265)
Q Consensus 216 ~~E~~l~~----~gl~~tivRPg~l 236 (265)
.+|++++. .+++++++||+.+
T Consensus 162 ~~E~~~~~~~~~~~l~~~ilR~~~v 186 (357)
T d1db3a_ 162 YAYWITVNYRESYGMYACNGILFNH 186 (357)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCE
T ss_pred HHHHHHHHHHHHhCCCEEEEEeccc
Confidence 88887754 6899999999864
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.72 E-value=3.9e-17 Score=141.38 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=107.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch--------hhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA--------MESFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~--------~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.++|||||||||+||++|+++|+++||+|++++|+.... ..+...+++++++|+.|.+.+.+++++++.+++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 467899999999999999999999999999999976432 122456799999999999999999999999997
Q ss_pred cCc-----------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 170 PSE-----------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 170 ~~~-----------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.+ .....++...+..++++.||.+++.................+..++++..+.+++++++||+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~~~~ 160 (312)
T d1qyda_ 82 ALAGGVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFA 160 (312)
T ss_dssp CCCCSSSSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEEECCEEH
T ss_pred hhhhcccccchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEeccceee
Confidence 611 12445567777777788888776544322222222334457778888999999999999999754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.71 E-value=5.5e-17 Score=144.46 Aligned_cols=138 Identities=18% Similarity=0.135 Sum_probs=104.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-------hhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-------AMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-------~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|.|||||||||||++|+++|+++|++|+++++-... .......+++++.+|+.|.+.+.++++ ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 579999999999999999999999999999863321 122345689999999999999999886 78999987
Q ss_pred Cc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCc---------ccccchhHH-HHHHHHH
Q 024643 171 SE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI---------QALMKGNAR-KLAEQDE 218 (265)
Q Consensus 171 ~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~---------~~~~~~~~~-~~k~~~E 218 (265)
.. . .+.+++++.+++|||++||..+|...... .+..+...| ..|..+|
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E 161 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIE 161 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHH
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHH
Confidence 21 1 13445788999999999999998643211 122233334 4888888
Q ss_pred HHHHh------CCCCEEEEeCCCcc
Q 024643 219 SMLMA------SGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l~~------~gl~~tivRPg~l~ 237 (265)
+.+.. .+++++++||+.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~lR~~~v~ 186 (347)
T d1z45a2 162 NILNDLYNSDKKSWKFAILRYFNPI 186 (347)
T ss_dssp HHHHHHHHHSTTSCEEEEEEECEEE
T ss_pred HHHHHHHHhhccCCcEEEEeecceE
Confidence 87653 57899999998643
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.69 E-value=1.1e-16 Score=142.41 Aligned_cols=138 Identities=15% Similarity=0.153 Sum_probs=106.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh--hh-cCCccEEeeeCCCCH-HHHHHHHcCCCEEEEcCc-
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM--ES-FGTYVESMAGDASNK-KFLKTALRGVRSIICPSE- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~--~~-~~~~v~~i~~D~~d~-~~l~~~~~~~d~vi~~~~- 172 (265)
.+|+|+||||||+||++++++|+++||+|++++|+.++.. .+ ...+++++++|+.|. +.+..++.+++.+++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 4789999999999999999999999999999999876543 22 345799999999885 457788999999987621
Q ss_pred ---------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCccC
Q 024643 173 ---------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQN 238 (265)
Q Consensus 173 ---------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~~ 238 (265)
..+.++++++|++++++.||.......... .....+..|...|+++.+.+++++++||+++.+
T Consensus 82 ~~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~---~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~~~ 153 (350)
T d1xgka_ 82 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPW---PAVPMWAPKFTVENYVRQLGLPSTFVYAGIYNN 153 (350)
T ss_dssp TTSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSC---CCCTTTHHHHHHHHHHHTSSSCEEEEEECEEGG
T ss_pred ccchhhhhhhHHHHHHHHhCCCceEEEeeccccccCCcc---cchhhhhhHHHHHHHHHhhccCceeeeeceeec
Confidence 136677888999888888887654332211 111223467788999999999999999997543
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=4.9e-16 Score=137.52 Aligned_cols=138 Identities=12% Similarity=0.022 Sum_probs=98.7
Q ss_pred CEE-EEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhh-------cCCccEEeeeCCCCHHHHHHHHcC--C
Q 024643 100 DAV-LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-------FGTYVESMAGDASNKKFLKTALRG--V 164 (265)
Q Consensus 100 ~~v-lVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~-------~~~~v~~i~~D~~d~~~l~~~~~~--~ 164 (265)
||| ||||||||||++|+++|+++||+|++++|.... .+.+ ...+++++.+|++|++.+.+++.+ .
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 467 999999999999999999999999999996532 1111 224689999999999999999864 4
Q ss_pred CEEEEcCc----h------------------HHHHHHHhCCC---CEEEEecccccccCCCCc-----ccccchhHH-HH
Q 024643 165 RSIICPSE----G------------------FISNAGSLKGV---QHVILLSQLSVYRGSGGI-----QALMKGNAR-KL 213 (265)
Q Consensus 165 d~vi~~~~----~------------------~~~~aa~~~gv---~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~ 213 (265)
+.+++... . .+.+++++.++ .+||++||..+|+..... .+..+...| ..
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s 160 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 160 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence 56665511 0 13445666665 489999999998643211 122233334 48
Q ss_pred HHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
|..+|+++.. .+++++++||+.+.
T Consensus 161 K~~aE~~~~~~~~~~~~~~~ilr~~~vy 188 (347)
T d1t2aa_ 161 KLYAYWIVVNFREAYNLFAVNGILFNHE 188 (347)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 8888988754 68999999998653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.67 E-value=3.5e-16 Score=134.16 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=107.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh---------hhcCCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM---------ESFGTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~---------~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
.++|||||||||+||++++++|+++||+|++++|+..... .+....++++.+|+.+...+.+.+++++.++
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 4789999999999999999999999999999999865421 2235678999999999999999999999999
Q ss_pred EcCc-------hHHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 169 CPSE-------GFISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 169 ~~~~-------~~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+... ....+++..++++++++.|+.+........... .......+...+.++.+.+++++++||+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~r~~~v~ 156 (307)
T d1qyca_ 82 STVGSLQIESQVNIIKAIKEVGTVKRFFPSEFGNDVDNVHAVEP-AKSVFEVKAKVRRAIEAEGIPYTYVSSNCFA 156 (307)
T ss_dssp ECCCGGGSGGGHHHHHHHHHHCCCSEEECSCCSSCTTSCCCCTT-HHHHHHHHHHHHHHHHHHTCCBEEEECCEEH
T ss_pred ecccccccchhhHHHHHHHHhccccceeeecccccccccccccc-ccccccccccccchhhccCCCceecccceec
Confidence 8722 235566788889999999987664433222111 1122346677888889999999999999753
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.66 E-value=1.1e-15 Score=135.59 Aligned_cols=140 Identities=15% Similarity=0.043 Sum_probs=104.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc----h---hh----hcCCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----A---ME----SFGTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~----~---~~----~~~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
..|+|||||||||||++|+++|+++||+|++++|.... . .. .....++++.+|..|...+.....+.+.
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~~ 94 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 94 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccccccc
Confidence 35789999999999999999999999999999873321 1 11 1224689999999999999999999999
Q ss_pred EEEcCc--h--------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHH
Q 024643 167 IICPSE--G--------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDE 218 (265)
Q Consensus 167 vi~~~~--~--------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E 218 (265)
++++.. . .+.++|.+.++++||++||..+|+..... .+..+...| ..|..+|
T Consensus 95 v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 174 (341)
T d1sb8a_ 95 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNE 174 (341)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHH
T ss_pred cccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHH
Confidence 987611 0 13455788999999999999998653221 122222334 4788888
Q ss_pred HHHH----hCCCCEEEEeCCCcc
Q 024643 219 SMLM----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l~----~~gl~~tivRPg~l~ 237 (265)
+++. ..+++++++||+.+.
T Consensus 175 ~~~~~~~~~~~i~~~ilR~~~v~ 197 (341)
T d1sb8a_ 175 LYADVFSRCYGFSTIGLRYFNVF 197 (341)
T ss_dssp HHHHHHHHHHCCCCEEEEECCEE
T ss_pred HHHHHHHHHhCCCeEEEEeceee
Confidence 7764 368999999999654
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=5.6e-17 Score=142.84 Aligned_cols=134 Identities=14% Similarity=0.108 Sum_probs=92.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh----cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES----FGTYVESMAGDASNKKFLKTALRGVRSIICPSE- 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~----~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~- 172 (265)
+++||||||+||||++|+++|+++|++|++++|.... ...+ ....+++...|+ +..++.++|+|||+..
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECccc
Confidence 4789999999999999999999999999999874322 1111 122344444444 4456678999998721
Q ss_pred ---h------------------HHHHHHHhCCCCEEEEecccccccCCCCc----------ccccchhHH-HHHHHHHHH
Q 024643 173 ---G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMKGNAR-KLAEQDESM 220 (265)
Q Consensus 173 ---~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----------~~~~~~~~~-~~k~~~E~~ 220 (265)
. .+.++++..++ ++||+||..+|...... .+..+...| ..|..+|.+
T Consensus 76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~ 154 (312)
T d2b69a1 76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETM 154 (312)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHH
T ss_pred CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHH
Confidence 0 13445667776 89999999998653211 122333444 478888887
Q ss_pred HH----hCCCCEEEEeCCCccC
Q 024643 221 LM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 221 l~----~~gl~~tivRPg~l~~ 238 (265)
+. ..|++++++||+.+.+
T Consensus 155 ~~~~~~~~~~~~~~lR~~~vyG 176 (312)
T d2b69a1 155 CYAYMKQEGVEVRVARIFNTFG 176 (312)
T ss_dssp HHHHHHHHCCCEEEEEECCEEC
T ss_pred HHHHHHHhCCcEEEEEeeeEEC
Confidence 74 4699999999998653
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.65 E-value=8.6e-16 Score=136.54 Aligned_cols=139 Identities=17% Similarity=0.162 Sum_probs=100.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC-------cchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK-------RNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~-------~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
+|+|||||||||||++|+++|+++|++|.+++++. .........+++++.+|+.|.+.+.+++++.+.+++..
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a 81 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence 68999999999999999999999999877776642 12233355789999999999999999999999998761
Q ss_pred c---h---------H----------HHHHHHhCCCCEEEEecccccccCCCC-----------------cccccchhHH-
Q 024643 172 E---G---------F----------ISNAGSLKGVQHVILLSQLSVYRGSGG-----------------IQALMKGNAR- 211 (265)
Q Consensus 172 ~---~---------~----------~~~aa~~~gv~r~V~iSS~~v~~~~~~-----------------~~~~~~~~~~- 211 (265)
. . . +.+++...+ .++|++||..+|+.... ..+..+...|
T Consensus 82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~ 160 (346)
T d1oc2a_ 82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYS 160 (346)
T ss_dssp SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHH
T ss_pred hcccccchhhCcccceeeehHhHHhhhhhhcccc-ccccccccceEecccCccccccccccCcccccccCCCCCCCCHHH
Confidence 1 0 0 223355566 47899999888753210 0112222334
Q ss_pred HHHHHHHHHHH----hCCCCEEEEeCCCccC
Q 024643 212 KLAEQDESMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 212 ~~k~~~E~~l~----~~gl~~tivRPg~l~~ 238 (265)
..|..+|.+++ ..+++++++||+.+.+
T Consensus 161 ~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyG 191 (346)
T d1oc2a_ 161 STKAASDLIVKAWVRSFGVKATISNCSNNYG 191 (346)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEES
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeecceeC
Confidence 47888887774 3689999999997654
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=1.1e-15 Score=133.73 Aligned_cols=125 Identities=10% Similarity=0.092 Sum_probs=93.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcC---ch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPS---EG 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~---~~ 173 (265)
+++|||||||||||++|+++|+++|+.|+++++.. ..|+.|.+.+.++++ ..|.++++. ..
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~ 67 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------ELNLLDSRAVHDFFASERIDQVYLAAAKVGG 67 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------TCCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------hccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence 57899999999999999999999999988765432 258999999988875 478999761 10
Q ss_pred --------------------HHHHHHHhCCCCEEEEecccccccCCCCc----------ccccchhHH-HHHHHHHHHHH
Q 024643 174 --------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI----------QALMKGNAR-KLAEQDESMLM 222 (265)
Q Consensus 174 --------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~----------~~~~~~~~~-~~k~~~E~~l~ 222 (265)
.+.++|.+.+++||||+||.++|+..... .+..+...| ..|.++|+.+.
T Consensus 68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~ 147 (315)
T d1e6ua_ 68 IVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCE 147 (315)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 13445778999999999999998753221 011112233 58888898875
Q ss_pred ----hCCCCEEEEeCCCcc
Q 024643 223 ----ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 ----~~gl~~tivRPg~l~ 237 (265)
+.|++++++||+.+.
T Consensus 148 ~~~~~~gl~~~ilR~~~vy 166 (315)
T d1e6ua_ 148 SYNRQYGRDYRSVMPTNLY 166 (315)
T ss_dssp HHHHHHCCEEEEEEECEEE
T ss_pred HHHHHhCCCEEEEeeccEE
Confidence 469999999999754
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.62 E-value=1.8e-15 Score=125.45 Aligned_cols=126 Identities=17% Similarity=0.198 Sum_probs=91.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-cCCCEEEEcCch--
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPSEG-- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-~~~d~vi~~~~~-- 173 (265)
.++|+||||||+||++++++|+++|+ +|++++|++... .+.+ ..+..|..++...+ ..+|.||++.+.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~----~~~~---~~~~~d~~~~~~~~~~~~d~vi~~~g~~~ 74 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE----HPRL---DNPVGPLAELLPQLDGSIDTAFCCLGTTI 74 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC----CTTE---ECCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh----cccc---cccccchhhhhhccccchheeeeeeeeec
Confidence 47999999999999999999999997 667767654321 1223 33444555444443 458999976210
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCC-EEEEeCC
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIP-YTIIRTG 234 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~-~tivRPg 234 (265)
.+.++++..++++|+++||.+++.... ..+...|..+|+++++.+++ ++|+||+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~~~-------~~y~~~K~~~E~~l~~~~~~~~~I~Rp~ 147 (212)
T d2a35a1 75 KEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS-------IFYNRVKGELEQALQEQGWPQLTIARPS 147 (212)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTTCS-------SHHHHHHHHHHHHHTTSCCSEEEEEECC
T ss_pred cccccccccccchhhhhhhcccccccccccccccccccccccccc-------cchhHHHHHHhhhccccccccceeeCCc
Confidence 144567889999999999998865432 23345788999999998885 9999999
Q ss_pred CccC
Q 024643 235 VLQN 238 (265)
Q Consensus 235 ~l~~ 238 (265)
.+.+
T Consensus 148 ~v~G 151 (212)
T d2a35a1 148 LLFG 151 (212)
T ss_dssp SEES
T ss_pred ceeC
Confidence 8654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.62 E-value=1.1e-15 Score=135.75 Aligned_cols=146 Identities=10% Similarity=0.054 Sum_probs=100.6
Q ss_pred CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHHcC
Q 024643 92 DEFPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALRG 163 (265)
Q Consensus 92 ~~~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~~~ 163 (265)
+.....++++||||||+||||++|+++|+++|++|++++|+.++...+ .......+.+|+.|.+++.+++.+
T Consensus 4 ~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 83 (342)
T d1y1pa1 4 DNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKG 83 (342)
T ss_dssp TTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTT
T ss_pred CCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhccc
Confidence 344455689999999999999999999999999999999987654432 122345677999999999999999
Q ss_pred CCEEEEcCch-------------------HHHHHHHh-CCCCEEEEecccccccCCCC-c--------------------
Q 024643 164 VRSIICPSEG-------------------FISNAGSL-KGVQHVILLSQLSVYRGSGG-I-------------------- 202 (265)
Q Consensus 164 ~d~vi~~~~~-------------------~~~~aa~~-~gv~r~V~iSS~~v~~~~~~-~-------------------- 202 (265)
+|.++++... .+.+++.+ .++++|||+||..+.....+ .
T Consensus 84 ~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 163 (342)
T d1y1pa1 84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred chhhhhhcccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccccccc
Confidence 9999977110 02333444 47999999999765321110 0
Q ss_pred ----ccccchhHH-HHHHHHHHHH----Hh--CCCCEEEEeCCCcc
Q 024643 203 ----QALMKGNAR-KLAEQDESML----MA--SGIPYTIIRTGVLQ 237 (265)
Q Consensus 203 ----~~~~~~~~~-~~k~~~E~~l----~~--~gl~~tivRPg~l~ 237 (265)
.+..+...| ..|..+|+++ +. .+++++++||+.+.
T Consensus 164 ~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~ 209 (342)
T d1y1pa1 164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTI 209 (342)
T ss_dssp SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEE
T ss_pred ccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceeccccee
Confidence 011111223 4777777654 33 35778999998643
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.62 E-value=1.3e-15 Score=136.78 Aligned_cols=138 Identities=11% Similarity=0.071 Sum_probs=98.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc------hhhh-cCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN------AMES-FGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~------~~~~-~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
|+||||||+||||++|+++|++.|++|++..++... ...+ ...+++++.+|++|++.+.++++ .+|+|||+
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 789999999999999999999999987665543321 1111 23579999999999999999886 47999987
Q ss_pred Cc----h------------------HHHHHHHhC---------CCCEEEEecccccccCCCCc---------------cc
Q 024643 171 SE----G------------------FISNAGSLK---------GVQHVILLSQLSVYRGSGGI---------------QA 204 (265)
Q Consensus 171 ~~----~------------------~~~~aa~~~---------gv~r~V~iSS~~v~~~~~~~---------------~~ 204 (265)
+. . .+.++|++. ++++||++||..+|+..... .+
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence 21 0 022334433 45699999999998643211 11
Q ss_pred ccchhHH-HHHHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 205 LMKGNAR-KLAEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~~-~~k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
..+...| ..|..+|.++.. .+++++++||+.+.
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vy 198 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNY 198 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceE
Confidence 2222334 478888888754 79999999999754
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.62 E-value=1.4e-15 Score=133.89 Aligned_cols=139 Identities=19% Similarity=0.158 Sum_probs=100.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEE------EEeCC-----cchhhh-cCCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKA------LVKDK-----RNAMES-FGTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~------~~R~~-----~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
|+|+||||||+||++|+++|+++|++|.. +++-. ...... ....++++.+|..+...........|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 78999999999999999999999986543 33221 111111 3457899999999999999999999999
Q ss_pred EEcCc---h-------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHH
Q 024643 168 ICPSE---G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDES 219 (265)
Q Consensus 168 i~~~~---~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~ 219 (265)
+++.. . .+.+++.+.++++||++||..+|...... .+..+...| .+|..+|.
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 160 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDL 160 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHH
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 98721 0 13445777899999999999998654221 122222334 47788887
Q ss_pred HHH----hCCCCEEEEeCCCccC
Q 024643 220 MLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 220 ~l~----~~gl~~tivRPg~l~~ 238 (265)
+++ +.+++++++||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~lR~~~vyG 183 (322)
T d1r6da_ 161 VARAYHRTYGLDVRITRCCNNYG 183 (322)
T ss_dssp HHHHHHHHHCCCEEEEEECEEEC
T ss_pred HHHHHHHHhCCCEEEEEeeeEEC
Confidence 764 4699999999998643
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.61 E-value=3.2e-15 Score=134.93 Aligned_cols=140 Identities=20% Similarity=0.157 Sum_probs=97.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC-------------C----c------chhhhcCCccEEeeeCCCCHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD-------------K----R------NAMESFGTYVESMAGDASNKK 155 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~-------------~----~------~~~~~~~~~v~~i~~D~~d~~ 155 (265)
+|+|||||||||||++|+++|+++||+|++++.- . . ......+.+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 5899999999999999999999999999998620 0 0 011123567999999999999
Q ss_pred HHHHHHcC--CCEEEEcCc----h---------------------HHHHHHHhCCCC-EEEEecccccccCCCCc-----
Q 024643 156 FLKTALRG--VRSIICPSE----G---------------------FISNAGSLKGVQ-HVILLSQLSVYRGSGGI----- 202 (265)
Q Consensus 156 ~l~~~~~~--~d~vi~~~~----~---------------------~~~~aa~~~gv~-r~V~iSS~~v~~~~~~~----- 202 (265)
.+.+++++ +|+|||+.. . .+.+++++.+++ ++++.||..++......
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 99999975 599998721 0 023345665655 67788877776432210
Q ss_pred -------------ccccchhHH-HHHHHHHHHHH----hCCCCEEEEeCCCccC
Q 024643 203 -------------QALMKGNAR-KLAEQDESMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 203 -------------~~~~~~~~~-~~k~~~E~~l~----~~gl~~tivRPg~l~~ 238 (265)
.+..+...| ..|..+|.++. ..+++++++||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G 214 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYG 214 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEEC
T ss_pred ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccC
Confidence 011222334 47888887764 5799999999997543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.60 E-value=6.2e-15 Score=130.64 Aligned_cols=139 Identities=19% Similarity=0.133 Sum_probs=99.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-------------chhhhcCCccEEeeeCCCCHHHHHHHHcCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-------------NAMESFGTYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-------------~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
.+||||||||||||++|+++|+++|++|++++|-.. ........+++++.+|++|.+.+.+++.+.+
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence 468999999999999999999999999999975211 1122345689999999999999999887665
Q ss_pred --EEEEcCc----h------------------HHHHHHHhCCCCEEEEecccccccCCCCcc------cccchhHH-HHH
Q 024643 166 --SIICPSE----G------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQ------ALMKGNAR-KLA 214 (265)
Q Consensus 166 --~vi~~~~----~------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~------~~~~~~~~-~~k 214 (265)
+++|+.. . .+.++++..++++|+++||..++....... ...+...| ..|
T Consensus 82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k 161 (346)
T d1ek6a_ 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK 161 (346)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHH
T ss_pred cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHH
Confidence 4555511 0 134557889999999999998876543221 11111223 366
Q ss_pred HHHHHHHHh-----CCCCEEEEeCCCcc
Q 024643 215 EQDESMLMA-----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~-----~gl~~tivRPg~l~ 237 (265)
..+|+.+.+ .+++++++||+.+.
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~lR~~~v~ 189 (346)
T d1ek6a_ 162 FFIEEMIRDLCQADKTWNAVLLRYFNPT 189 (346)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECEEE
T ss_pred HHHHHHHHHHHHhccCCceEEEeeccee
Confidence 666766543 58999999998643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.59 E-value=1.1e-14 Score=128.75 Aligned_cols=137 Identities=13% Similarity=0.019 Sum_probs=98.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHHHH-HHHcCCCEEEEcCc---h
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLK-TALRGVRSIICPSE---G 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~l~-~~~~~~d~vi~~~~---~ 173 (265)
|||||||||||||++|+++|+++| ++|+++++.......+ ..++++++.+|+++.+.+. .+++++|+|||+.. .
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~ 80 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP 80 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence 789999999999999999999999 5899998876554433 3468999999998876554 47788999998711 0
Q ss_pred -------------------HHHHHHHhCCCCEEEEecccccccCCCCc------------ccccchhHH-HHHHHHHHHH
Q 024643 174 -------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------------QALMKGNAR-KLAEQDESML 221 (265)
Q Consensus 174 -------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------------~~~~~~~~~-~~k~~~E~~l 221 (265)
.+.+++.+.++ +++++||..+|...... ....+...| ..|..+|+++
T Consensus 81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~ 159 (342)
T d2blla1 81 IEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVI 159 (342)
T ss_dssp HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHH
T ss_pred cccccCCccccccccccccccccccccccc-cccccccccccccccccccccccccccccccCCCcchhhhcccchhhhh
Confidence 13344566665 55678888776543221 011122333 4788888887
Q ss_pred Hh----CCCCEEEEeCCCcc
Q 024643 222 MA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~~----~gl~~tivRPg~l~ 237 (265)
.. .+++++++||+.+.
T Consensus 160 ~~~~~~~~~~~~i~r~~~~~ 179 (342)
T d2blla1 160 WAYGEKEGLQFTLFRPFNWM 179 (342)
T ss_dssp HHHHHHHCCCEEEEEECSEE
T ss_pred hhhhcccCceeEEeeccccc
Confidence 54 58999999999754
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.59 E-value=1.7e-14 Score=129.69 Aligned_cols=139 Identities=16% Similarity=0.136 Sum_probs=100.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEe---CC------cchh--------------hhcCCccEEeeeCCCCH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVK---DK------RNAM--------------ESFGTYVESMAGDASNK 154 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R---~~------~~~~--------------~~~~~~v~~i~~D~~d~ 154 (265)
.|+||||||+||||++|+++|++ .||+|+++++ +. +..+ ......+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 58999999999999999999996 6899999974 10 0000 01124688999999999
Q ss_pred HHHHHHHc---CCCEEEEcCc---h-------------------HHHHHHHhCCCCEEEEecccccccCCCCc-------
Q 024643 155 KFLKTALR---GVRSIICPSE---G-------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI------- 202 (265)
Q Consensus 155 ~~l~~~~~---~~d~vi~~~~---~-------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~------- 202 (265)
+.+.++++ ++|+|||+.. . .+..+++..++++++++|+..++......
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 161 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAE 161 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCccccccccccccccccccccccccc
Confidence 99998885 6799998721 0 03345778999999999998887543211
Q ss_pred -----ccccchhHH-HHHHHHHHHHHh----CCCCEEEEeCCCcc
Q 024643 203 -----QALMKGNAR-KLAEQDESMLMA----SGIPYTIIRTGVLQ 237 (265)
Q Consensus 203 -----~~~~~~~~~-~~k~~~E~~l~~----~gl~~tivRPg~l~ 237 (265)
.+..+...| ..|...|++++. .|++++++||+.+.
T Consensus 162 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vy 206 (383)
T d1gy8a_ 162 PIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNAC 206 (383)
T ss_dssp CBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEE
T ss_pred ccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceee
Confidence 112222333 478888887754 69999999999753
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.58 E-value=2e-14 Score=125.57 Aligned_cols=137 Identities=12% Similarity=0.022 Sum_probs=96.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-----hhhh-cCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-----AMES-FGTYVESMAGDASNKKFLKTALRG--VRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-----~~~~-~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~ 171 (265)
++|||||||||||++|+++|+++||+|++++|.... .+.+ ...+++++.+|+.|.+.+.+.+.. .++++++.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 589999999999999999999999999999997532 1222 235789999999999999988764 44555541
Q ss_pred c----h------------------HHHHHHHhCCC-CEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHH
Q 024643 172 E----G------------------FISNAGSLKGV-QHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLM 222 (265)
Q Consensus 172 ~----~------------------~~~~aa~~~gv-~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~ 222 (265)
. . .+.+++++.++ ++|++.||..++...... .+..+...| ..|..+|+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 0 0 02345666665 478888888776443221 122222333 47778887765
Q ss_pred h----CCCCEEEEeCCCc
Q 024643 223 A----SGIPYTIIRTGVL 236 (265)
Q Consensus 223 ~----~gl~~tivRPg~l 236 (265)
. .+++++++||+.+
T Consensus 161 ~~~~~~~~~~~~lr~~~v 178 (321)
T d1rpna_ 161 NYRESFGLHASSGILFNH 178 (321)
T ss_dssp HHHHHHCCCEEEEEECCE
T ss_pred HHHhhcCCcEEEEEEecc
Confidence 3 7899999999864
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.58 E-value=1.4e-14 Score=123.74 Aligned_cols=142 Identities=14% Similarity=0.177 Sum_probs=103.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
++.+|+++||||+++||+++++.|+++|++|++.+|++++++.+ .+..+.++++|++|+++++++++ .+|
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (244)
T d1nffa_ 3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLH 82 (244)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCe
Confidence 35689999999999999999999999999999999998776544 34568889999999998876653 689
Q ss_pred EEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 166 SIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 166 ~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
++|++.+. + ....+++.+-.+||++||.....+.+....|...+. ...
T Consensus 83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 162 (244)
T d1nffa_ 83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL 162 (244)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence 99976110 0 111255666789999999988655443333332221 122
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+.+..++..+|++++.|.||++.
T Consensus 163 tk~lA~el~~~gIrVN~I~PG~i~ 186 (244)
T d1nffa_ 163 TKSTALELGPSGIRVNSIHPGLVK 186 (244)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHhcccCEEEEEEeeCCcc
Confidence 333444556689999999999863
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.58 E-value=7.1e-15 Score=125.48 Aligned_cols=141 Identities=14% Similarity=0.222 Sum_probs=102.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+|+++||||+++||+++++.|+++|++|++.+|++++++++ .+.....+.+|++|+++++++++ .+|+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI 81 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence 4689999999999999999999999999999999998776544 34567889999999998877663 6899
Q ss_pred EEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHH
Q 024643 167 IICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLA 214 (265)
Q Consensus 167 vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k 214 (265)
+|++.+ . + ....+++.+-.+||++||.....+.+....|..++. ....
T Consensus 82 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt 161 (243)
T d1q7ba_ 82 LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFS 161 (243)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHH
T ss_pred ehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHH
Confidence 997611 0 0 112256667789999999887655443333332221 1222
Q ss_pred HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 215 EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 215 ~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+.+...+..+|++++.|.||++.
T Consensus 162 ~~lA~ela~~gIrVN~I~PG~i~ 184 (243)
T d1q7ba_ 162 KSLAREVASRGITVNVVAPGFIE 184 (243)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHhCccCeEEEEEecceEe
Confidence 33444556689999999999863
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.57 E-value=1.6e-14 Score=124.10 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=103.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
+..+|+++||||+++||++++++|+++|++|++.+|+.+++++. .+..+.++++|++|+++++++++ .+|
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence 35789999999999999999999999999999999998766544 34568899999999998887653 689
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
++|++.+ . + +...+++.+-.+||++||.......+....|..++. ...
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l 161 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL 161 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHH
Confidence 9997611 0 0 111255667789999999988665544333332221 122
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l 236 (265)
.+.....+...|++++.|.||++
T Consensus 162 t~~lA~e~a~~gIrVN~I~PG~v 184 (254)
T d1hdca_ 162 SKLAAVELGTDRIRVNSVHPGMT 184 (254)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHhCCCceEEEEeeeCcc
Confidence 23334445668999999999986
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.56 E-value=2e-14 Score=123.20 Aligned_cols=142 Identities=18% Similarity=0.226 Sum_probs=103.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+++|++|++++.++++
T Consensus 7 ~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 7 CGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHK 86 (251)
T ss_dssp CCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 34579999999999999999999999999999999998765432 34568899999999998887664
Q ss_pred CCCEEEEcCc-------------hH-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--
Q 024643 163 GVRSIICPSE-------------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 163 ~~d~vi~~~~-------------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
.+|++|++.+ .+ ....+++.+-.+||++||.....+.+....|..++.
T Consensus 87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal 166 (251)
T d2c07a1 87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGV 166 (251)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence 6899997611 00 112256667789999999887655443333332221
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+...+...|++++.|.||++.
T Consensus 167 ~~ltr~lA~el~~~gIrVN~V~PG~v~ 193 (251)
T d2c07a1 167 IGFTKSLAKELASRNITVNAIAPGFIS 193 (251)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCEe
Confidence 123333444556689999999999874
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.56 E-value=3.3e-14 Score=125.03 Aligned_cols=140 Identities=9% Similarity=-0.037 Sum_probs=96.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-----chhhh-------cCCccEEeeeCCCCHHHHHHHHc--CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-----NAMES-------FGTYVESMAGDASNKKFLKTALR--GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-----~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~--~~ 164 (265)
++++||||||||||++|+++|+++||+|++++|... +...+ ....++++.+|+.+.+.+.+.++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 478999999999999999999999999999999542 21111 23457899999999999998885 57
Q ss_pred CEEEEcCc---h-------------------HHHHHHHh-----CCCCEEEEecccccccCCCCc----ccccchhHH-H
Q 024643 165 RSIICPSE---G-------------------FISNAGSL-----KGVQHVILLSQLSVYRGSGGI----QALMKGNAR-K 212 (265)
Q Consensus 165 d~vi~~~~---~-------------------~~~~aa~~-----~gv~r~V~iSS~~v~~~~~~~----~~~~~~~~~-~ 212 (265)
|+|||+.. . .+..+++. ....++++.||...+...... .+..+...| .
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~ 160 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 160 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence 99998721 0 01122222 344578888887765443221 122222333 3
Q ss_pred HHHHHHHHHH----hCCCCEEEEeCCCccC
Q 024643 213 LAEQDESMLM----ASGIPYTIIRTGVLQN 238 (265)
Q Consensus 213 ~k~~~E~~l~----~~gl~~tivRPg~l~~ 238 (265)
.|..+|+++. ..+++++++||+.+.+
T Consensus 161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyG 190 (339)
T d1n7ha_ 161 SKCAAHWYTVNYREAYGLFACNGILFNHES 190 (339)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEEC
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEccccC
Confidence 7777777653 4799999999997543
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.56 E-value=2.4e-14 Score=122.51 Aligned_cols=140 Identities=11% Similarity=0.047 Sum_probs=101.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSIIC 169 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi~ 169 (265)
..+|+++||||+++||+++++.|+++|++|++.+|+++..+.....+...+++|++|+++++++++ .+|++|+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 468999999999999999999999999999999999876543333356788999999988876653 6899997
Q ss_pred cCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHH
Q 024643 170 PSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 217 (265)
Q Consensus 170 ~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~ 217 (265)
+.+ . + ....+++.+-.+||++||.....+.+....|...+. ....+.+
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~l 162 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSL 162 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHH
Confidence 611 0 0 112266677789999999988665443333332221 1222333
Q ss_pred HHHHHhCCCCEEEEeCCCc
Q 024643 218 ESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l 236 (265)
...+..+|++++.|.||++
T Consensus 163 A~el~~~gIrVN~I~PG~v 181 (248)
T d2d1ya1 163 ALDLAPLRIRVNAVAPGAI 181 (248)
T ss_dssp HHHHGGGTEEEEEEEECSB
T ss_pred HHHhhhhCcEEEEEeeCCC
Confidence 4455668999999999986
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.56 E-value=4.6e-14 Score=120.59 Aligned_cols=142 Identities=13% Similarity=0.118 Sum_probs=102.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh----hhcCCccEEeeeCCCCHHHHHHHH-------cCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTAL-------RGV 164 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~v~~i~~D~~d~~~l~~~~-------~~~ 164 (265)
++.+|+++||||+++||+++++.|+++|++|++.+|+..+.. +..+..+..+++|++|++++.+++ ..+
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 457899999999999999999999999999999999874321 124567889999999999887765 368
Q ss_pred CEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HH
Q 024643 165 RSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 212 (265)
Q Consensus 165 d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~ 212 (265)
|++|++.+ . + +...+++.+-.+||++||.....+.+....|..++. ..
T Consensus 82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 161 (247)
T d2ew8a1 82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG 161 (247)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHH
Confidence 99997611 0 0 112256677789999999987655443333333221 12
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.+..++...|++++.|.||++.
T Consensus 162 ltk~lA~ela~~gIrVN~I~PG~i~ 186 (247)
T d2ew8a1 162 FTRALASDLGKDGITVNAIAPSLVR 186 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCC-
T ss_pred HHHHHHHHhcccCeEEEEEeeCCCC
Confidence 2333444556789999999999863
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=6.9e-14 Score=119.29 Aligned_cols=142 Identities=15% Similarity=0.093 Sum_probs=102.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--cCCccEEeeeCCCCHHHHHHHHc---CCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR---GVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~ 170 (265)
.+.+|+++||||+++||+++++.|+++|++|++.+|+.++++++ ...++..+.+|++|+++++++++ .+|++|++
T Consensus 4 ~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnn 83 (244)
T d1pr9a_ 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEec
Confidence 46789999999999999999999999999999999998776554 23468899999999999998875 57888876
Q ss_pred Cc-----h--------H-----------------HHH-HHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHH
Q 024643 171 SE-----G--------F-----------------ISN-AGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQD 217 (265)
Q Consensus 171 ~~-----~--------~-----------------~~~-aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~ 217 (265)
.+ . + +.. .+++.+..+||++||.......+....|..++. ....+..
T Consensus 84 Ag~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l 163 (244)
T d1pr9a_ 84 AAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM 163 (244)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence 11 0 0 111 134456679999999987655443333322221 1122333
Q ss_pred HHHHHhCCCCEEEEeCCCcc
Q 024643 218 ESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 218 E~~l~~~gl~~tivRPg~l~ 237 (265)
...+...|++++.|.||++.
T Consensus 164 A~el~~~gIrvN~I~PG~v~ 183 (244)
T d1pr9a_ 164 ALELGPHKIRVNAVNPTVVM 183 (244)
T ss_dssp HHHHGGGTEEEEEEEECCBC
T ss_pred HHHhCCCcEEEEEEeeCcCc
Confidence 34455689999999999863
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.55 E-value=3e-14 Score=122.32 Aligned_cols=141 Identities=14% Similarity=0.183 Sum_probs=101.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+.+|++|++++.++++ .+|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 5678999999999999999999999999999999998765543 46678899999999999887653 6899
Q ss_pred EEEcCc-----h--------H-------------H----H-HHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 167 IICPSE-----G--------F-------------I----S-NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 167 vi~~~~-----~--------~-------------~----~-~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
+|++.+ . + + . ..++.....+||++||.....+.+....|..++. ...
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 162 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISL 162 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHH
Confidence 998611 0 0 0 1 1133344579999999988765443333322221 122
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+.+..++..+|++++.|.||++.
T Consensus 163 t~~lA~el~~~gIrVN~V~PG~i~ 186 (256)
T d1k2wa_ 163 TQSAGLNLIRHGINVNAIAPGVVD 186 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHhcccCeEEEEEecCCCC
Confidence 233344456689999999999863
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=2.3e-14 Score=122.42 Aligned_cols=141 Identities=14% Similarity=0.170 Sum_probs=98.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
...+++++||||+++||++++++|+++|++|++.+|+.+++++. .+.++..+.+|++|++++.++++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG 83 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999999999999999998776543 34578899999999998876653
Q ss_pred CCCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--
Q 024643 163 GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 163 ~~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
.+|.+|++.+. + +...+++.+..+||++||..+..+.+....|..++.
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal 163 (244)
T d1yb1a_ 84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAA 163 (244)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHH
Confidence 58999977210 0 112266778889999999987654332222222211
Q ss_pred HHHHHHHHHHHHh---CCCCEEEEeCCCc
Q 024643 211 RKLAEQDESMLMA---SGIPYTIIRTGVL 236 (265)
Q Consensus 211 ~~~k~~~E~~l~~---~gl~~tivRPg~l 236 (265)
....+.....+.. .|+.++.|.||++
T Consensus 164 ~~~~~~La~El~~~~~~gI~V~~i~PG~v 192 (244)
T d1yb1a_ 164 VGFHKTLTDELAALQITGVKTTCLCPNFV 192 (244)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEETHH
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEEEcCCC
Confidence 0111222222322 5899999999985
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.55 E-value=3.4e-14 Score=122.31 Aligned_cols=142 Identities=15% Similarity=0.160 Sum_probs=102.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|+++++++. .+..+..+.+|++|+++++++++
T Consensus 2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999998765433 24568899999999988876653
Q ss_pred CCCEEEEcCc------hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 GVRSIICPSE------GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 ~~d~vi~~~~------~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ .+ +...+.+.+-.+||++||.....+.+....|...+.
T Consensus 82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1zema1 82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA 161 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence 6899997611 01 111255566789999999987765544333332221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+...+..+|++++.|.||++.
T Consensus 162 l~~ltk~lA~el~~~gIrVN~I~PG~v~ 189 (260)
T d1zema1 162 IIALTETAALDLAPYNIRVNAISPGYMG 189 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHhhhhCCEEEEeccCccc
Confidence 122233444456689999999999873
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.54 E-value=4.3e-14 Score=121.10 Aligned_cols=141 Identities=11% Similarity=0.175 Sum_probs=100.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+.++++|++|++++.++++ .
T Consensus 3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (251)
T d1zk4a1 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999999999999998765543 24578899999999998876553 6
Q ss_pred CCEEEEcCc-----h--------H-----------------HHHHHHhCCCC-EEEEecccccccCCCCcccccchhH--
Q 024643 164 VRSIICPSE-----G--------F-----------------ISNAGSLKGVQ-HVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 164 ~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~-r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
+|++|++.+ . + ....+++.+.+ +||++||.....+.+....|...+.
T Consensus 83 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal 162 (251)
T d1zk4a1 83 VSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV 162 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred ceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHH
Confidence 899997611 0 0 11124556654 8999999887655443333333221
Q ss_pred HHH-H-HHHHHHHHhCCCCEEEEeCCCc
Q 024643 211 RKL-A-EQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 ~~~-k-~~~E~~l~~~gl~~tivRPg~l 236 (265)
... + .+.|..+..+|++++.|.||++
T Consensus 163 ~~lt~~lA~e~~l~~~gIrVN~I~PG~i 190 (251)
T d1zk4a1 163 RIMSKSAALDCALKDYDVRVNTVHPGYI 190 (251)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEECCB
T ss_pred hcchHHHHHHHhcCCCcEEEEEEeCCCC
Confidence 111 1 1234446678999999999986
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.54 E-value=6.8e-14 Score=120.32 Aligned_cols=140 Identities=15% Similarity=0.175 Sum_probs=101.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHH-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL------- 161 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~------- 161 (265)
..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+++|++|++++++++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 81 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999998765432 2346788999999999987665
Q ss_pred cCCCEEEEcCc-----h-H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH
Q 024643 162 RGVRSIICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 162 ~~~d~vi~~~~-----~-~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
..+|++|++.+ . + ....+++.+-.+||++||.....+.+....|...+.
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa 161 (258)
T d1iy8a_ 82 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKH 161 (258)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHH
Confidence 36899997611 0 0 111255667789999999887655443333333221
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 211 --RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 --~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
....+.+...+..+|++++.|.||++
T Consensus 162 al~~lt~~lA~el~~~gIrVN~i~PG~v 189 (258)
T d1iy8a_ 162 GVVGLTRNSAVEYGRYGIRINAIAPGAI 189 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSB
T ss_pred HHHHHHHHHHHHhCccCceEEEEeeCcc
Confidence 12233444456678999999999986
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=4.5e-14 Score=121.00 Aligned_cols=140 Identities=15% Similarity=0.091 Sum_probs=101.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|++++++++ ...++..+.+|++|+++++++++ .+|+
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 82 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 45789999999999999999999999999999999998776554 23568899999999998887653 5899
Q ss_pred EEEcCc-----h-H-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 167 IICPSE-----G-F-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 167 vi~~~~-----~-~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
+|++.+ . + ....+++.+ .++|++||.....+.+....|...+. ...
T Consensus 83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 161 (250)
T d1ydea1 83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAM 161 (250)
T ss_dssp EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC-CCCcccccccccccccCcchhHHHHhhHHHH
Confidence 997611 0 0 111244444 79999999987655443333332221 122
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l 236 (265)
.+.+...+...|++++.|.||++
T Consensus 162 t~~lA~e~a~~gIrVN~I~PG~i 184 (250)
T d1ydea1 162 TKALALDESPYGVRVNCISPGNI 184 (250)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSB
T ss_pred HHHHHHHhcccCeEEEEEeeCCC
Confidence 33344455678999999999987
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.54 E-value=8.7e-14 Score=119.17 Aligned_cols=141 Identities=17% Similarity=0.161 Sum_probs=100.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+++|++|++++.++++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 82 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999998664432 35578889999999998877653
Q ss_pred CCCEEEEcCc-----hH-------------------------HHHHHHhCCCCEEEEeccccccc-CCCCcccccchhH-
Q 024643 163 GVRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNA- 210 (265)
Q Consensus 163 ~~d~vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~-~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ .+ +...+++.+-.++|+++|..... +......|..++.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaa 162 (251)
T d1vl8a_ 83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGG 162 (251)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHh
Confidence 6899998711 00 11225667778999999876533 2222223322221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+..++..+|++++.|.||++.
T Consensus 163 l~~lt~~lA~e~~~~gIrVN~I~PG~i~ 190 (251)
T d1vl8a_ 163 VASLTKALAKEWGRYGIRVNVIAPGWYR 190 (251)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCccc
Confidence 123333444566689999999999873
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.54 E-value=7.1e-14 Score=119.08 Aligned_cols=141 Identities=13% Similarity=0.087 Sum_probs=101.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--cCCccEEeeeCCCCHHHHHHHHc---CCCEEEEcC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--FGTYVESMAGDASNKKFLKTALR---GVRSIICPS 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--~~~~v~~i~~D~~d~~~l~~~~~---~~d~vi~~~ 171 (265)
..+|+++||||+++||++++++|+++|++|++.+|+.++++++ ...++..+.+|++|+++++++++ .+|++|++.
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA 82 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA 82 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence 5689999999999999999999999999999999998776544 23468899999999999998886 579999761
Q ss_pred c-----hH---------------------H----H-HHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHHH
Q 024643 172 E-----GF---------------------I----S-NAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDE 218 (265)
Q Consensus 172 ~-----~~---------------------~----~-~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~E 218 (265)
+ .+ + . ..+++.+-.++|++||.......+....|...+. ....+...
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA 162 (242)
T d1cyda_ 83 ALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA 162 (242)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHH
Confidence 1 00 0 0 1123344569999999877655443333322221 12233334
Q ss_pred HHHHhCCCCEEEEeCCCcc
Q 024643 219 SMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 219 ~~l~~~gl~~tivRPg~l~ 237 (265)
.++..+|++++.|.||++.
T Consensus 163 ~e~~~~gIrvN~I~PG~i~ 181 (242)
T d1cyda_ 163 MELGPHKIRVNSVNPTVVL 181 (242)
T ss_dssp HHHGGGTEEEEEEEECCBT
T ss_pred HHhCccCeecccCCCCCcc
Confidence 4456689999999999873
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.54 E-value=4.5e-14 Score=121.27 Aligned_cols=141 Identities=12% Similarity=0.153 Sum_probs=102.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------c
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
...+|+++||||+++||++++++|+++|++|++.+|+.+++++. .+..+..+++|++|++++.+++ .
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g 87 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45789999999999999999999999999999999998765433 3457889999999998887655 3
Q ss_pred CCCEEEEcCch------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--H
Q 024643 163 GVRSIICPSEG------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 211 (265)
Q Consensus 163 ~~d~vi~~~~~------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~ 211 (265)
.+|++|++.+. + ....+++.+-.+||++||.....+.+....|..++. .
T Consensus 88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~ 167 (255)
T d1fmca_ 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHH
Confidence 68999986110 0 111255566679999999887665544333332221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
...+.+...+..+|++++.|.||++
T Consensus 168 ~lt~~lA~el~~~gIrVN~I~PG~i 192 (255)
T d1fmca_ 168 HLVRNMAFDLGEKNIRVNGIAPGAI 192 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSB
T ss_pred HHHHHHHHHhCccCeEEEEeeeCcC
Confidence 2233344445668999999999986
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.53 E-value=7e-14 Score=118.80 Aligned_cols=136 Identities=15% Similarity=0.200 Sum_probs=96.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
..++|+++||||+++||+++++.|+++|++|++.+|+.+..+ .+..+++|++|+++++++++ .+|++|
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV 78 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 78 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc-----CceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 356899999999999999999999999999999999886543 46778999999998876653 689999
Q ss_pred EcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHH
Q 024643 169 CPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 216 (265)
Q Consensus 169 ~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~ 216 (265)
++.+ . + ....+++.+..+||++||.......+....|..++. ....+.
T Consensus 79 nnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~ 158 (237)
T d1uzma1 79 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS 158 (237)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHH
T ss_pred eeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHH
Confidence 7611 0 0 112266677789999999887654433323322221 112233
Q ss_pred HHHHHHhCCCCEEEEeCCCc
Q 024643 217 DESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l 236 (265)
+..++..+|++++.|.||++
T Consensus 159 lA~e~~~~gIrVN~I~PG~v 178 (237)
T d1uzma1 159 IARELSKANVTANVVAPGYI 178 (237)
T ss_dssp HHHHHGGGTEEEEEEEECSB
T ss_pred HHhhhhcCCceeeeeeeCcC
Confidence 34445568999999999986
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.53 E-value=6.9e-14 Score=120.31 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=100.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------c
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
++.+|+++||||+++||+++++.|+++|++|++.+|+.+++++. .+..+..+++|++|++++.+++ .
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999998765543 2456788999999998887654 2
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ . + ....+++.+-.+||++||.......+....|..++.
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa 164 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGA 164 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHH
Confidence 3789997611 0 0 111256667789999999887654443323322211
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
....+.+..++..+|++++.|.||++
T Consensus 165 l~~lt~~lA~el~~~gIrVN~I~PG~i 191 (259)
T d2ae2a_ 165 MDQLTRCLAFEWAKDNIRVNGVGPGVI 191 (259)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHHHhCcCceEEEEeeeCcc
Confidence 11223333444568999999999987
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.52 E-value=5e-14 Score=121.10 Aligned_cols=141 Identities=13% Similarity=0.091 Sum_probs=100.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc-chhh-------hcCCccEEeeeCCCCHHHHHHHHc------
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR-NAME-------SFGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~-~~~~-------~~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
+.+|+++||||+++||++++++|+++|++|++.+|+.. .+++ ..+..+.++++|++|++++.++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999753 2222 135578899999999998887663
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+ . + ....+++.+-.+||++||.....+.+....|..++.
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHG 161 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhh
Confidence 5899997711 0 0 112256677789999999988765443333322221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+...+...|++++.|.||++.
T Consensus 162 l~~lt~~lA~el~~~gIrVN~I~PG~i~ 189 (260)
T d1x1ta1 162 VVGFTKVTALETAGQGITANAICPGWVR 189 (260)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred HHHhHHHHHHHhchhCcEEEEEecCCCC
Confidence 122233344455689999999999863
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.51 E-value=1.3e-13 Score=118.60 Aligned_cols=140 Identities=15% Similarity=0.198 Sum_probs=99.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
+.+|+++||||+++||++++++|+++|++|++.+|+++++++. .+..+.++.+|++|.++++++++ +
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g 83 (258)
T d1ae1a_ 4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 83 (258)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999999998665433 34567889999999998876552 2
Q ss_pred -CCEEEEcCc-------------hH-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--
Q 024643 164 -VRSIICPSE-------------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA-- 210 (265)
Q Consensus 164 -~d~vi~~~~-------------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~-- 210 (265)
.|+++++.+ .+ ....+.+.+..++|++||.....+.+....|...+.
T Consensus 84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al 163 (258)
T d1ae1a_ 84 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAI 163 (258)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 677776511 00 112256677789999999988655443323322211
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 211 RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 ~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
....+....++...|++++.|.||++
T Consensus 164 ~~lt~~lA~el~~~gIrvN~I~PG~i 189 (258)
T d1ae1a_ 164 NQMTKSLACEWAKDNIRVNSVAPGVI 189 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSB
T ss_pred HHHHHHHHHhcCcCcEEEEEEeeCcc
Confidence 11223333445568999999999987
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.51 E-value=1.2e-13 Score=118.88 Aligned_cols=141 Identities=17% Similarity=0.167 Sum_probs=94.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+.+|+++||||+++||+++++.|+++|++|++.+|+++++++. .+..+..+.+|++|++++.++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 35689999999999999999999999999999999998765543 24568899999999988776542
Q ss_pred -CCCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 -GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 -~~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|++|++.+. + ....+++.+..+||++||.......+....|...+.
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa 164 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGA 164 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHH
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccc
Confidence 37899876110 0 111256677789999999887654433323322221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
....+.+..++..+|++++.|.||++
T Consensus 165 l~~lt~~lA~e~~~~gIrVN~V~PG~i 191 (259)
T d1xq1a_ 165 LNQLARNLACEWASDGIRANAVAPAVI 191 (259)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCSC
T ss_pred hhhhhHHHHHHhcccCeEEEEeccCcc
Confidence 12223344455668999999999986
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.50 E-value=2.1e-13 Score=117.61 Aligned_cols=142 Identities=8% Similarity=0.098 Sum_probs=100.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc-------C
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------G 163 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~-------~ 163 (265)
++.+|+++||||+++||++++++|+++|++|++.+|+.+++++. ....+.++.+|++|+++++++++ .
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999999998765543 23457789999999998887663 6
Q ss_pred CCEEEEcCc------h---------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcc-cccchh-
Q 024643 164 VRSIICPSE------G---------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQ-ALMKGN- 209 (265)
Q Consensus 164 ~d~vi~~~~------~---------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~-~~~~~~- 209 (265)
+|++|++.+ . + ....+.+.+-.++|++||........+.. .|...+
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKa 162 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKH 162 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHH
Confidence 899997611 0 0 11125667778999999987765433221 221111
Q ss_pred -HHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 -ARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 -~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.....+.+..++..+|++++.|.||++.
T Consensus 163 al~~lt~~lA~el~~~gIrVN~I~PG~i~ 191 (268)
T d2bgka1 163 AVLGLTTSLCTELGEYGIRVNCVSPYIVA 191 (268)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCCS
T ss_pred HHHhCHHHHHHHhChhCeEEEecCCCCcc
Confidence 1122233334455689999999999863
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.50 E-value=1.2e-13 Score=117.50 Aligned_cols=138 Identities=11% Similarity=0.168 Sum_probs=99.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCe-------EEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTR-------IKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~-------V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
+.|+||||+++||++++++|+++|++ |++.+|+.+++++. .+..+..+.+|++|++++.++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999987 88899998765543 24567889999999998876653
Q ss_pred ---CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchh
Q 024643 163 ---GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 ---~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|++|++.+ . + +...|++.+-.++|++||.....+.+....|..++
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 161 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK 161 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence 5899997611 0 0 12226667778999999998876554433333322
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+.+..++...|++++.|.||++.
T Consensus 162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~ 191 (240)
T d2bd0a1 162 FGQRGLVETMRLYARKCNVRITDVQPGAVY 191 (240)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEeeeCccc
Confidence 1 123334445566789999999999863
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.50 E-value=2.3e-13 Score=116.66 Aligned_cols=138 Identities=17% Similarity=0.152 Sum_probs=97.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------cCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RGVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~~~d 165 (265)
+|.++||||+++||++++++|+++|++|++.+|+++++++. .+..+..+++|++|++++.+++ ..+|
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 80 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence 35679999999999999999999999999999998765543 3457888999999999887665 3689
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHh-CCCCEEEEecccccccCCCCcccccchhH--HH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSL-KGVQHVILLSQLSVYRGSGGIQALMKGNA--RK 212 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~ 212 (265)
++|++.+ . + ....+.+ ....+||++||.....+.+....|..++. ..
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 9997611 0 0 0111333 34568999999887655443333332221 12
Q ss_pred HHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 213 LAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 213 ~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
..+.+..++...|++++.|.||++
T Consensus 161 ltk~lA~el~~~gIrVN~I~PG~i 184 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYCPGIV 184 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSB
T ss_pred hHHHHHHHhhhhCcEEEEEecCcc
Confidence 333344456678999999999987
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.50 E-value=1.9e-13 Score=120.87 Aligned_cols=73 Identities=16% Similarity=0.113 Sum_probs=61.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHcC--CCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALRG--VRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~ 170 (265)
.+|+|||||||||||++|+++|+++|++|++++|+..+...+ ....++.+.+|++|++.+.++++. .++++++
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 368999999999999999999999999999999987543322 235799999999999999998864 5788876
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.49 E-value=2.2e-13 Score=117.25 Aligned_cols=142 Identities=12% Similarity=0.147 Sum_probs=99.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
+..+|+++||||+++||++++++|+++|++|++.+|+.+. ++.. .+..+..+++|++|++++.++++
T Consensus 4 dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4578999999999999999999999999999999998643 2221 34568889999999998877663
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCC-CEEEEecccccccCCCCcccccchhH
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGV-QHVILLSQLSVYRGSGGIQALMKGNA 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv-~r~V~iSS~~v~~~~~~~~~~~~~~~ 210 (265)
.+|++|++.+ . + +...+++.+. .+||++||.....+.+....|..++.
T Consensus 84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKa 163 (261)
T d1geea_ 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG 163 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCc
Confidence 6899998611 0 0 1112455554 46889999877654433323322221
Q ss_pred --HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 --RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 --~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+..++..+|++++.|.||++.
T Consensus 164 al~~lt~~lA~e~~~~gIrVN~I~PG~v~ 192 (261)
T d1geea_ 164 GMKLMTETLALEYAPKGIRVNNIGPGAIN 192 (261)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBC
T ss_pred cchhhHHHHHHHhhhhCcEEEEEeeCcCc
Confidence 123334444556689999999999873
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.49 E-value=1.7e-13 Score=117.56 Aligned_cols=138 Identities=12% Similarity=0.149 Sum_probs=98.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
+|.++||||+++||+++++.|+++|++|++.+|+++++++. .+..+..+++|++|+++++++++ .+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 67889999999999999999999999999999998765543 34578899999999998887653 589
Q ss_pred EEEEcCc-----h--------H-------------HHHH------HHhCCCCEEEEecccccccCCCCcccccchhH--H
Q 024643 166 SIICPSE-----G--------F-------------ISNA------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 211 (265)
Q Consensus 166 ~vi~~~~-----~--------~-------------~~~a------a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~ 211 (265)
++|++.+ . + +..+ +.+.+..++|++||.....+.+....|..++. .
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~ 161 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 161 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence 9997611 0 0 1111 23456679999999887665443333332221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
...+.+..++..+|++++.|.||++
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~PG~i 186 (257)
T d2rhca1 162 GFTKALGLELARTGITVNAVCPGFV 186 (257)
T ss_dssp HHHHHHHHHTTTSEEEEEEEEECSB
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCCC
Confidence 1222333344558899999999987
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.49 E-value=3.1e-13 Score=115.08 Aligned_cols=140 Identities=16% Similarity=0.130 Sum_probs=97.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-cCCccEEeeeCCCCHHHHHHHHc-------CCCEEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-FGTYVESMAGDASNKKFLKTALR-------GVRSII 168 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-~~~~v~~i~~D~~d~~~l~~~~~-------~~d~vi 168 (265)
..+|+++||||+++||++++++|+++|++|++.+|+.+++++. ...+++.+++|++|+++++++++ .+|++|
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 82 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 4679999999999999999999999999999999998776554 23467889999999999887653 689999
Q ss_pred EcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHH
Q 024643 169 CPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQ 216 (265)
Q Consensus 169 ~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~ 216 (265)
++.+ . + ....+++.+..+++++||.+.. ..+....|...+. ....+.
T Consensus 83 nnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~-~~~~~~~Y~asKaal~~ltk~ 161 (242)
T d1ulsa_ 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRT 161 (242)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGG-CCTTCHHHHHHHHHHHHHHHH
T ss_pred ECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccccc-CCCCCcchHHHHHHHHHHHHH
Confidence 7611 0 0 1112455666788888875433 2222222222211 122233
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
+..++..+|++++.|.||++.
T Consensus 162 lA~ela~~gIrVN~I~PG~v~ 182 (242)
T d1ulsa_ 162 LALELGRWGIRVNTLAPGFIE 182 (242)
T ss_dssp HHHHHGGGTEEEEEEEECSBC
T ss_pred HHHHHhhhCcEEEEEeeCccc
Confidence 344455689999999999874
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.48 E-value=9.5e-14 Score=118.53 Aligned_cols=124 Identities=15% Similarity=0.139 Sum_probs=90.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEcCc---h
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICPSE---G 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~~~---~ 173 (265)
.|+|||||||||||++|+++|.++||+|++++|+. +|+.|.+++.++++ ..|+||++.. .
T Consensus 1 ~MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~~ 65 (281)
T d1vl0a_ 1 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV 65 (281)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeecccccc
Confidence 37899999999999999999999999999988753 58999999999987 5699998721 1
Q ss_pred -H------------------HHHHHHhCCCCEEEEecccccccCCCCc-----ccccch-hHHHHHHHHHHHHHhCCCCE
Q 024643 174 -F------------------ISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKG-NARKLAEQDESMLMASGIPY 228 (265)
Q Consensus 174 -~------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~-~~~~~k~~~E~~l~~~gl~~ 228 (265)
. ... .......++++.||..++...... .+..+. .+...+...|+++++.+.++
T Consensus 66 ~~~~~~~~~~~~~n~~~~~~~~~-~~~~~~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~~~~~~ 144 (281)
T d1vl0a_ 66 DKCEEQYDLAYKINAIGPKNLAA-AAYSVGAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNPKY 144 (281)
T ss_dssp HHHHHCHHHHHHHHTHHHHHHHH-HHHHHTCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCSSE
T ss_pred ccccccchhhccccccccccccc-ccccccccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHHhCCCc
Confidence 0 111 222334577888887776543211 111122 22347788899999999999
Q ss_pred EEEeCCCccC
Q 024643 229 TIIRTGVLQN 238 (265)
Q Consensus 229 tivRPg~l~~ 238 (265)
+++||+++..
T Consensus 145 ~i~R~~~vyG 154 (281)
T d1vl0a_ 145 YIVRTAWLYG 154 (281)
T ss_dssp EEEEECSEES
T ss_pred cccceeEEeC
Confidence 9999998643
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.48 E-value=2.4e-13 Score=117.69 Aligned_cols=141 Identities=10% Similarity=0.138 Sum_probs=98.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHc-----
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALR----- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~----- 162 (265)
..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. ....+..+.+|++|++++.++++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 81 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999998765432 12357899999999998877653
Q ss_pred --CCCEEEEcCc-----h----------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccch
Q 024643 163 --GVRSIICPSE-----G----------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKG 208 (265)
Q Consensus 163 --~~d~vi~~~~-----~----------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~ 208 (265)
.+|++|++.+ . + ....+++.+-.+++++||.+.....+....|...
T Consensus 82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as 161 (274)
T d1xhla_ 82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 161 (274)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence 5899997611 0 0 1111555666788888887665443333233222
Q ss_pred hH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
+. ....+.+...+...|++++.|.||++.
T Consensus 162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~ 192 (274)
T d1xhla_ 162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVA 192 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred hhHHHHHHHHHHHHHhHhCCceeeeccCCCc
Confidence 21 122333444556689999999999873
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.48 E-value=3.7e-13 Score=117.47 Aligned_cols=96 Identities=15% Similarity=0.023 Sum_probs=72.3
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc--chh---hh-cCCccEEeeeCCCCHHHHHHHHcCC--CEEEEcCc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR--NAM---ES-FGTYVESMAGDASNKKFLKTALRGV--RSIICPSE 172 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~--~~~---~~-~~~~v~~i~~D~~d~~~l~~~~~~~--d~vi~~~~ 172 (265)
||||||||||||++|+++|+++|++|+++++-.. ... .+ ...+++++.+|+.|.+.+.++++++ |+|||+..
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 7999999999999999999999999999875221 111 11 2457999999999999999999764 99998721
Q ss_pred -----------h-----------HHHHHHHhCCCCEEEEecccccc
Q 024643 173 -----------G-----------FISNAGSLKGVQHVILLSQLSVY 196 (265)
Q Consensus 173 -----------~-----------~~~~aa~~~gv~r~V~iSS~~v~ 196 (265)
. .+.+++...+++++|+.||..++
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~ 127 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKV 127 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccccccc
Confidence 0 03345677788776666665543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.47 E-value=1.8e-13 Score=117.32 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=98.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHH-------cCCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~-------~~~d 165 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|++++++++ .+.....+++|++|++++++++ ..+|
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD 82 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN 82 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999999999999999999999998765543 3567888999999998887655 3689
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
++|++.+ . + ....+++.+ .+||++||.....+.+....|..++. ...
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 161 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL 161 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CceecccchhhhcCccccccccchhHHHHHH
Confidence 9998711 0 0 111244444 79999999987655443333333221 112
Q ss_pred HHHHHHHHHh--CCCCEEEEeCCCc
Q 024643 214 AEQDESMLMA--SGIPYTIIRTGVL 236 (265)
Q Consensus 214 k~~~E~~l~~--~gl~~tivRPg~l 236 (265)
.+.+...+.. ++++++.|.||++
T Consensus 162 t~~lA~e~~~~g~~IrVN~I~PG~i 186 (253)
T d1hxha_ 162 TRAAALSCRKQGYAIRVNSIHPDGI 186 (253)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEESEE
T ss_pred HHHHHHHHhhcCCCEEEEEEeECCC
Confidence 2222333333 5699999999986
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.47 E-value=2.7e-13 Score=116.04 Aligned_cols=139 Identities=14% Similarity=0.151 Sum_probs=97.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+|+++||||+++||+++++.|+++|++|++.+|+.++.++. .+..+..+.+|++|+++++++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999998664432 13467889999999998887653
Q ss_pred CCCEEEEcCc-----hH-----------------HHHHHHhCC---CCEEEEecccccccCCCCcccccchhH--HHHHH
Q 024643 163 GVRSIICPSE-----GF-----------------ISNAGSLKG---VQHVILLSQLSVYRGSGGIQALMKGNA--RKLAE 215 (265)
Q Consensus 163 ~~d~vi~~~~-----~~-----------------~~~aa~~~g---v~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~ 215 (265)
.+|++|++.+ .+ ....+.+.+ ..+||++||.....+.+....|..++. ....+
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr 161 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 161 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence 6899997721 10 111133322 358999999988665544333333222 11111
Q ss_pred --HHHHHHHhCCCCEEEEeCCCc
Q 024643 216 --QDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 216 --~~E~~l~~~gl~~tivRPg~l 236 (265)
..+..+...|++++.|.||++
T Consensus 162 s~ala~e~~~~gIrVN~I~PG~i 184 (254)
T d2gdza1 162 SAALAANLMNSGVRLNAICPGFV 184 (254)
T ss_dssp HHHHHHHHHTCCEEEEEEEESCB
T ss_pred HHHHHHHhcCCCEEEEEEEcCCC
Confidence 234556678999999999987
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.46 E-value=4.3e-13 Score=115.94 Aligned_cols=142 Identities=11% Similarity=0.135 Sum_probs=94.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----c-----CCccEEeeeCCCCHHHHHHHHc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----F-----GTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~-----~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|+.+++++. . ...+..+++|++|+++++++++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 81 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999998765432 1 2357899999999998876653
Q ss_pred ---CCCEEEEcCc------------h-----H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccc
Q 024643 163 ---GVRSIICPSE------------G-----F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQAL 205 (265)
Q Consensus 163 ---~~d~vi~~~~------------~-----~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~ 205 (265)
.+|++|++.+ . + ....+++.+-..|+++||.+...+.+....|
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y 161 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYY 161 (272)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHH
T ss_pred HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchh
Confidence 6899997611 0 1 0111444443444455544444333332223
Q ss_pred cchhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 206 MKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 206 ~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
...+. ....+.+...+..+|++++.|.||++.
T Consensus 162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 195 (272)
T d1xkqa_ 162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVE 195 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBC
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCc
Confidence 22221 122333444556689999999999873
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.46 E-value=8.4e-13 Score=113.52 Aligned_cols=141 Identities=13% Similarity=0.161 Sum_probs=93.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
+..+|+++||||+++||++++++|+++|++|++.+|+.+++++. ....+..+++|++|++++.++++
T Consensus 2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 81 (264)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999998765433 12358899999999998877653
Q ss_pred ---CCCEEEEcCch-----------------H-----------------HHHHHHhCCCCEEEEeccc-ccccCCCCccc
Q 024643 163 ---GVRSIICPSEG-----------------F-----------------ISNAGSLKGVQHVILLSQL-SVYRGSGGIQA 204 (265)
Q Consensus 163 ---~~d~vi~~~~~-----------------~-----------------~~~aa~~~gv~r~V~iSS~-~v~~~~~~~~~ 204 (265)
.+|++|++.+. + +...+++.+ .++|.++|. +...+.+....
T Consensus 82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~ 160 (264)
T d1spxa_ 82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPY 160 (264)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHH
T ss_pred HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchh
Confidence 68999976210 0 011144444 455555554 33333322222
Q ss_pred ccchhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 205 LMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 205 ~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
|...+. ....+.+..++..+|++++.|.||++.
T Consensus 161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~ 195 (264)
T d1spxa_ 161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVA 195 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBC
T ss_pred hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCC
Confidence 322211 122333444556689999999999873
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.45 E-value=2.4e-13 Score=115.89 Aligned_cols=137 Identities=15% Similarity=0.202 Sum_probs=96.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe-CCcchhhh------cCCccEEeeeCCCCHHHHHHHHc-------CCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVK-DKRNAMES------FGTYVESMAGDASNKKFLKTALR-------GVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R-~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~~-------~~d 165 (265)
+.|+||||+++||++++++|+++|++|++.++ +.+.+++. .+.++..+++|++|+++++++++ .+|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999999999999999998765 44433322 35678899999999998877653 689
Q ss_pred EEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 166 SIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 166 ~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
++|++.+ . + ....|++.+-.+||++||.....+.+....|...+. ...
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l 161 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGF 161 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHC
Confidence 9997611 0 0 122256667789999999887655443333332221 122
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l 236 (265)
.+.+..++..+|++++.|.||++
T Consensus 162 tk~lA~el~~~gIrvN~I~PG~i 184 (244)
T d1edoa_ 162 SKTAAREGASRNINVNVVCPGFI 184 (244)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSB
T ss_pred hHHHHHHHhhhCcEEEEEeccee
Confidence 33344455668999999999987
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.45 E-value=8.9e-13 Score=112.18 Aligned_cols=139 Identities=12% Similarity=0.115 Sum_probs=93.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHH---HCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc--------
Q 024643 99 RDAVLVTDGDSDIGQMVILSLI---VKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR-------- 162 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll---~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~-------- 162 (265)
+|+|+||||+++||++++++|+ ++|++|++.+|+.++++++ .+.++.++.+|++|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 6789999999999999999997 4789999999998876543 34679999999999987765542
Q ss_pred -CCCEEEEcCc------h--------H-----------------HHHHHHh-----------CCCCEEEEecccccccCC
Q 024643 163 -GVRSIICPSE------G--------F-----------------ISNAGSL-----------KGVQHVILLSQLSVYRGS 199 (265)
Q Consensus 163 -~~d~vi~~~~------~--------~-----------------~~~aa~~-----------~gv~r~V~iSS~~v~~~~ 199 (265)
.+|++|++.+ . + +...+++ .+..++|.+||.......
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~ 161 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 161 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCC
Confidence 4788887611 0 0 0011222 245789999997654322
Q ss_pred CC---cccccchhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 200 GG---IQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 200 ~~---~~~~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+ ...|..++. ....+.....+...|++++.|.||++.
T Consensus 162 ~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 162 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 11 112222221 112233344466789999999999974
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.45 E-value=5.8e-13 Score=113.74 Aligned_cols=137 Identities=18% Similarity=0.266 Sum_probs=96.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcc---hhh----h--cCCccEEeeeCCCCHHHHHHHHcC-----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN---AME----S--FGTYVESMAGDASNKKFLKTALRG----- 163 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~---~~~----~--~~~~v~~i~~D~~d~~~l~~~~~~----- 163 (265)
..+++||||+|+||++++++|+++|+ +|++++|+... ..+ + .+..+.++.+|++|.+++.++++.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 46999999999999999999999998 58888887432 111 1 345788999999999999988753
Q ss_pred -CCEEEEcCch--------------------------HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHH
Q 024643 164 -VRSIICPSEG--------------------------FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQ 216 (265)
Q Consensus 164 -~d~vi~~~~~--------------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~ 216 (265)
+|.++++.+. .+..++...+..+||++||............|...+.+. ..
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l--~~ 166 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYL--DG 166 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHH--HH
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhH--HH
Confidence 5667776110 022234556778999999998876555444444333221 12
Q ss_pred HHHHHHhCCCCEEEEeCCCcc
Q 024643 217 DESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l~ 237 (265)
..+.++..|++++.|.||.+.
T Consensus 167 la~~~~~~Gi~v~~I~pg~~~ 187 (259)
T d2fr1a1 167 LAQQRRSDGLPATAVAWGTWA 187 (259)
T ss_dssp HHHHHHHTTCCCEEEEECCBC
T ss_pred HHHHHHhCCCCEEECCCCccc
Confidence 233456789999999999764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.43 E-value=1.2e-12 Score=110.61 Aligned_cols=137 Identities=14% Similarity=0.121 Sum_probs=98.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC-HHHHHHHHcCCCEEEEcCc----
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN-KKFLKTALRGVRSIICPSE---- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d-~~~l~~~~~~~d~vi~~~~---- 172 (265)
++|+++||||+++||+++++.|+++|++|++.+|+++.+++ ...+++.+|+++ .+.+.+.+..+|++|++.+
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~---~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~~ 79 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR---SGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGPKA 79 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH---TCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh---cCCcEEEcchHHHHHHHHHHhCCCcEEEecccccCC
Confidence 57899999999999999999999999999999999876654 345778899976 4566677788999998611
Q ss_pred -h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchh--HHHHHHHHHHHHHhC
Q 024643 173 -G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN--ARKLAEQDESMLMAS 224 (265)
Q Consensus 173 -~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~--~~~~k~~~E~~l~~~ 224 (265)
. + ....+++.+..++|+++|............|..++ .....+.+..++..+
T Consensus 80 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~ 159 (234)
T d1o5ia_ 80 GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPY 159 (234)
T ss_dssp BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhccc
Confidence 0 0 11225666778999999987765444333332221 112223344455668
Q ss_pred CCCEEEEeCCCcc
Q 024643 225 GIPYTIIRTGVLQ 237 (265)
Q Consensus 225 gl~~tivRPg~l~ 237 (265)
|++++.|.||++.
T Consensus 160 gIrVN~I~PG~v~ 172 (234)
T d1o5ia_ 160 GITVNCVAPGWTE 172 (234)
T ss_dssp TEEEEEEEECSBC
T ss_pred CeEEeecccCccc
Confidence 9999999999873
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=2e-12 Score=110.81 Aligned_cols=142 Identities=19% Similarity=0.139 Sum_probs=95.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHH------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTAL------ 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~------ 161 (265)
..++++++||||+++||+++++.|+++|++|++.+|++++++++ .+..+..+++|++|++++.+++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~ 86 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 86 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999998765543 1236788999999999887655
Q ss_pred -cCCCEEEEcCch-------------H-----------------HHHHHHhCC--CCEEEEecccccccCCCCc--cccc
Q 024643 162 -RGVRSIICPSEG-------------F-----------------ISNAGSLKG--VQHVILLSQLSVYRGSGGI--QALM 206 (265)
Q Consensus 162 -~~~d~vi~~~~~-------------~-----------------~~~aa~~~g--v~r~V~iSS~~v~~~~~~~--~~~~ 206 (265)
.++|++|++.+. + +...++..+ -.+||++||.......+.. ..|.
T Consensus 87 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~ 166 (257)
T d1xg5a_ 87 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS 166 (257)
T ss_dssp HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred cCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHH
Confidence 368999987210 0 111133333 4699999998765432211 1122
Q ss_pred chhH--HHHHHHHHHHH--HhCCCCEEEEeCCCcc
Q 024643 207 KGNA--RKLAEQDESML--MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~--~~~k~~~E~~l--~~~gl~~tivRPg~l~ 237 (265)
..+. ....+.....+ ...+++++.|.||.+.
T Consensus 167 ~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~ 201 (257)
T d1xg5a_ 167 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVE 201 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBC
T ss_pred HHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCC
Confidence 1111 11222222333 3578999999999763
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.41 E-value=1.6e-12 Score=112.96 Aligned_cols=143 Identities=11% Similarity=0.179 Sum_probs=98.3
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHH------
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTAL------ 161 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~------ 161 (265)
....+|+++||||+++||++++++|+++|++|++++|+.+++++. .+..+..+.+|++|.+++.+++
T Consensus 21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~ 100 (294)
T d1w6ua_ 21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV 100 (294)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence 467789999999999999999999999999999999998654332 3567889999999999887655
Q ss_pred -cCCCEEEEcCch-------------H-------------H-----HHHHHhCCCCEEEEecccccccCCCCcccccchh
Q 024643 162 -RGVRSIICPSEG-------------F-------------I-----SNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 162 -~~~d~vi~~~~~-------------~-------------~-----~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
..+|+++++.+. . + .......+...++.++|.......+....|...+
T Consensus 101 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasK 180 (294)
T d1w6ua_ 101 AGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK 180 (294)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred ccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHH
Confidence 368999976110 0 0 0012234455777777776554443332232221
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+.....+..+|++++.|.||++.
T Consensus 181 aal~~ltk~lA~ela~~gIrVN~I~PG~i~ 210 (294)
T d1w6ua_ 181 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIK 210 (294)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHhHhCeEEEEEccCccc
Confidence 1 122233444455689999999999873
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.41 E-value=1.6e-12 Score=112.46 Aligned_cols=139 Identities=19% Similarity=0.203 Sum_probs=95.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHH-------cCCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~-------~~~d~ 166 (265)
+.+|+++||||+++||++++++|+++|++|++.+|+.++++++ .+..+..+.+|++|++++++++ ..+|+
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi 82 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT 82 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence 5689999999999999999999999999999999998776544 3567889999999998887665 36898
Q ss_pred EEEcCc------h------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 167 IICPSE------G------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 167 vi~~~~------~------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
+|++.+ . + +...+++.+ .++|+++|.....+.+....|..++.
T Consensus 83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~~~~~~~~~~Y~asKaa 161 (276)
T d1bdba_ 83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHA 161 (276)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTSTTSSCHHHHHHHHH
T ss_pred ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechhccCCCCCchHHHHHHH
Confidence 886511 0 0 011144444 68888888776554433323322221
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.+..++. .+++++.|.||++.
T Consensus 162 l~~ltr~lA~ela-~~IrVN~I~PG~i~ 188 (276)
T d1bdba_ 162 IVGLVRELAFELA-PYVRVNGVGSGGIN 188 (276)
T ss_dssp HHHHHHHHHHHHT-TTCEEEEEEECCCC
T ss_pred HHHHHHHHHHHhh-cceEEcccCCCCEe
Confidence 112222233343 35999999999873
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.40 E-value=2.2e-12 Score=110.44 Aligned_cols=142 Identities=11% Similarity=0.064 Sum_probs=97.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCC-CHHHHHHHH------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDAS-NKKFLKTAL------ 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~-d~~~l~~~~------ 161 (265)
+..+|+|+||||+++||++++++|+++|++|+++.|+.++.+.. ...++.++.+|++ +.+++.+++
T Consensus 2 ~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (254)
T d1sbya1 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999987654322 2346888999997 555555443
Q ss_pred -cCCCEEEEcCch-----H-----------------HHHHHHhC---CCCEEEEecccccccCCCCcccccchhH--HHH
Q 024643 162 -RGVRSIICPSEG-----F-----------------ISNAGSLK---GVQHVILLSQLSVYRGSGGIQALMKGNA--RKL 213 (265)
Q Consensus 162 -~~~d~vi~~~~~-----~-----------------~~~aa~~~---gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~ 213 (265)
..+|++|++.+. + +...+.+. ...+||++||...+.+.+....|..++. ...
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~ 161 (254)
T d1sbya1 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHH
Confidence 468999977211 1 11123222 3468999999988765544434433322 123
Q ss_pred HHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 214 AEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 214 k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+.....+...|++++.|.||++.
T Consensus 162 t~~la~el~~~gIrVn~I~PG~v~ 185 (254)
T d1sbya1 162 TNSLAKLAPITGVTAYSINPGITR 185 (254)
T ss_dssp HHHHHHHHHHHSEEEEEEEECSEE
T ss_pred HHHHHhhccccCeEEEEEEeCCCc
Confidence 334445566789999999999863
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=1.3e-12 Score=114.39 Aligned_cols=141 Identities=11% Similarity=0.094 Sum_probs=94.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----------cCCccEEeeeCCCCHHHHHHHHc--
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-----------FGTYVESMAGDASNKKFLKTALR-- 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----------~~~~v~~i~~D~~d~~~l~~~~~-- 162 (265)
.+.+++++||||+++||+++++.|+++|++|++.+|+.++++.. .+..+..+++|++|++++.++++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 34689999999999999999999999999999999998654322 13468889999999998877653
Q ss_pred -----CCCEEEEcCch-------------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccc
Q 024643 163 -----GVRSIICPSEG-------------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMK 207 (265)
Q Consensus 163 -----~~d~vi~~~~~-------------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~ 207 (265)
.+|++|++.+. + +...+.+.+..++|++|+..... .+....|..
T Consensus 89 ~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~-~~~~~~Y~a 167 (297)
T d1yxma1 89 LDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG-FPLAVHSGA 167 (297)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTC-CTTCHHHHH
T ss_pred HHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccccc-ccccccchh
Confidence 68999976110 0 11113445567888887654322 221112211
Q ss_pred hh--HHHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 208 GN--ARKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 208 ~~--~~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+ .....+.+...+...|++++.|.||++.
T Consensus 168 sKaal~~ltk~lA~el~~~gIrVN~I~PG~i~ 199 (297)
T d1yxma1 168 ARAGVYNLTKSLALEWACSGIRINCVAPGVIY 199 (297)
T ss_dssp HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBC
T ss_pred HHHHHHHHHHHHHHHhcccCceEEEeeeCcCc
Confidence 11 1112223333344589999999999873
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=1.7e-12 Score=112.87 Aligned_cols=139 Identities=17% Similarity=0.218 Sum_probs=95.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEE---EeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHc----
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKAL---VKDKRNAMES---------FGTYVESMAGDASNKKFLKTALR---- 162 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~---~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~---- 162 (265)
++.|+||||+++||+++++.|+++|++|+.+ .|+.+....+ .+..+..+.+|++|++++.++++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 4668999999999999999999999876554 4443332211 24578899999999999988774
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH-
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA- 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~- 210 (265)
.+|+++++.. . + +...|++.+-.+||++||..+..+.+....|..++.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaa 161 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFA 161 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHH
Confidence 4788887611 0 0 112266677789999999988665544333333222
Q ss_pred -HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 -RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 -~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+....++...|++++.|.||++.
T Consensus 162 l~~l~~~la~El~~~gIrVn~V~PG~v~ 189 (285)
T d1jtva_ 162 LEGLCESLAVLLLPFGVHLSLIECGPVH 189 (285)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCCCC
Confidence 122233444566789999999999874
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.38 E-value=2.7e-12 Score=109.02 Aligned_cols=139 Identities=15% Similarity=0.206 Sum_probs=94.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc-------CCCE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR-------GVRS 166 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~-------~~d~ 166 (265)
..+|+++||||+++||++++++|+++|++|++.+|+.+++++. .+..+..+++|++|+++++++++ .+|+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi 82 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG 82 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 4689999999999999999999999999999999998776544 35578889999999999876653 5899
Q ss_pred EEEcCc-----h--------H-------------HHHH-H-HhCCCCEEEEecccccccCCCCcccccc--hhHHHHHHH
Q 024643 167 IICPSE-----G--------F-------------ISNA-G-SLKGVQHVILLSQLSVYRGSGGIQALMK--GNARKLAEQ 216 (265)
Q Consensus 167 vi~~~~-----~--------~-------------~~~a-a-~~~gv~r~V~iSS~~v~~~~~~~~~~~~--~~~~~~k~~ 216 (265)
+|++.. . + +..+ + ...+-+.++++|+.+.... +....|.. .......+.
T Consensus 83 LinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~-~~~~~Y~~sK~al~~lt~~ 161 (241)
T d2a4ka1 83 VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA-FGLAHYAAGKLGVVGLART 161 (241)
T ss_dssp EEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-HHHHHHHHCSSHHHHHHHH
T ss_pred eccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccc-cCccccchhhHHHHHHHHH
Confidence 998611 0 0 0001 1 1133345666666543321 11111211 112223344
Q ss_pred HHHHHHhCCCCEEEEeCCCc
Q 024643 217 DESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 217 ~E~~l~~~gl~~tivRPg~l 236 (265)
....+..+|++++.|.||++
T Consensus 162 lA~el~~~gIrvN~I~PG~v 181 (241)
T d2a4ka1 162 LALELARKGVRVNVLLPGLI 181 (241)
T ss_dssp HHHHHTTTTCEEEEEEECSB
T ss_pred HHHHHhHhCCEEeeeccCcC
Confidence 55556678999999999986
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.37 E-value=1.4e-12 Score=111.67 Aligned_cols=128 Identities=24% Similarity=0.200 Sum_probs=88.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcC--CCEEEEcCc---h-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRG--VRSIICPSE---G- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~--~d~vi~~~~---~- 173 (265)
|+|||||||||||++|+++|.++|+.| .++++... +.+|+.|.+.+.+++++ +|+|||+.+ .
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-----------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~ 68 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD 68 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-----------ccCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence 789999999999999999999988755 44443321 34799999999999975 599998721 0
Q ss_pred ------------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchh-HHHHHHHHHHHHHhCCCCEE
Q 024643 174 ------------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGN-ARKLAEQDESMLMASGIPYT 229 (265)
Q Consensus 174 ------------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~-~~~~k~~~E~~l~~~gl~~t 229 (265)
.+.++++..+ .+++++||..++...... .+..+.. +...|..+|+.+......+.
T Consensus 69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~~~~~~~ 147 (298)
T d1n2sa_ 69 KAESEPELAQLLNATSVEAIAKAANETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHL 147 (298)
T ss_dssp HHTTCHHHHHHHHTHHHHHHHHHHTTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCSSEE
T ss_pred ccccCccccccccccccccchhhhhccc-cccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHhhhcccc
Confidence 1233444555 578888888776543211 1122222 33578888999988777788
Q ss_pred EEeCCCccCCC
Q 024643 230 IIRTGVLQNTP 240 (265)
Q Consensus 230 ivRPg~l~~~~ 240 (265)
++|++.+....
T Consensus 148 ~~~~~~~~~~~ 158 (298)
T d1n2sa_ 148 IFRTSWVYAGK 158 (298)
T ss_dssp EEEECSEECSS
T ss_pred cccccceeecc
Confidence 88888754443
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.37 E-value=4.8e-12 Score=108.42 Aligned_cols=142 Identities=13% Similarity=0.225 Sum_probs=94.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|+.+++.+. .+..+..+++|++|++++.++++
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL 85 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 45689999999999999999999999999999999998765332 35678899999999998877663
Q ss_pred -CCCEEEEcCc-----h--------H-----------------HHHHH-HhCCCCEEEEecccccccCCCC-cccccc-h
Q 024643 163 -GVRSIICPSE-----G--------F-----------------ISNAG-SLKGVQHVILLSQLSVYRGSGG-IQALMK-G 208 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-----------------~~~aa-~~~gv~r~V~iSS~~v~~~~~~-~~~~~~-~ 208 (265)
.+|++|++.+ . + +...+ ++.+..+++.+++......... ...... .
T Consensus 86 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~ 165 (260)
T d1h5qa_ 86 GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV 165 (260)
T ss_dssp CSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred CCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCcccc
Confidence 5888887611 0 0 11113 3445556777776654332211 000001 1
Q ss_pred hHHHHH-------HHHHHHHHhCCCCEEEEeCCCcc
Q 024643 209 NARKLA-------EQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 209 ~~~~~k-------~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.+...| +.+..++..+|++++.|.||++.
T Consensus 166 ~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~ 201 (260)
T d1h5qa_ 166 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVN 201 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC
T ss_pred chhhhhhhHHHHHHHHHHHhchhCeEEeecCCCccc
Confidence 111233 33334455689999999999873
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=6.3e-12 Score=106.93 Aligned_cols=140 Identities=13% Similarity=0.111 Sum_probs=96.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-CCccEEeeeCCCCHHHHHHHH---cCCCEEEEcCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-GTYVESMAGDASNKKFLKTAL---RGVRSIICPSE 172 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-~~~v~~i~~D~~d~~~l~~~~---~~~d~vi~~~~ 172 (265)
..+|+++||||+++||+++++.|+++|++|++.+|+++++++.. ...++...+|+.+.+.+.... ..+|.+|++.+
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence 56899999999999999999999999999999999987776553 356788889998887666544 57899998711
Q ss_pred -----h--------H-----------------HHHHHHhCCCCEEEEeccccccc-CCCCcccccchhH--HHHHHHHHH
Q 024643 173 -----G--------F-----------------ISNAGSLKGVQHVILLSQLSVYR-GSGGIQALMKGNA--RKLAEQDES 219 (265)
Q Consensus 173 -----~--------~-----------------~~~aa~~~gv~r~V~iSS~~v~~-~~~~~~~~~~~~~--~~~k~~~E~ 219 (265)
. + ....+...+..++|++||..... +......|...+. ....+....
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~ 163 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAA 163 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHH
Confidence 0 0 11124556677999999875432 2221112221111 112233334
Q ss_pred HHHhCCCCEEEEeCCCc
Q 024643 220 MLMASGIPYTIIRTGVL 236 (265)
Q Consensus 220 ~l~~~gl~~tivRPg~l 236 (265)
++..+|++++.|.||++
T Consensus 164 e~~~~gIrvN~I~PG~i 180 (245)
T d2ag5a1 164 DFIQQGIRCNCVCPGTV 180 (245)
T ss_dssp HHGGGTEEEEEEEESCE
T ss_pred HhhhhCcEEEEEeecee
Confidence 45568999999999986
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=9.9e-12 Score=106.89 Aligned_cols=139 Identities=12% Similarity=0.099 Sum_probs=94.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHH-------c
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
..+++++||||+++||++++++|+++|++|++++|+.+++++. .+..+..+.+|+.+.+.+.... .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999999999999998766543 3456778889999887765543 3
Q ss_pred CCCEEEEcCc-------------hH-----------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhHH-
Q 024643 163 GVRSIICPSE-------------GF-----------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNAR- 211 (265)
Q Consensus 163 ~~d~vi~~~~-------------~~-----------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~- 211 (265)
..|.++++.. .+ +...+++. -.++|++||..+..+.+....|..++..
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal 170 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFAL 170 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHH
Confidence 5788776511 00 11124433 3799999998876555433333332221
Q ss_pred -HHHHHHHHHH--HhCCCCEEEEeCCCc
Q 024643 212 -KLAEQDESML--MASGIPYTIIRTGVL 236 (265)
Q Consensus 212 -~~k~~~E~~l--~~~gl~~tivRPg~l 236 (265)
...+....++ ...+++++.|.||++
T Consensus 171 ~~~~~~La~El~~~~~~I~V~~v~PG~v 198 (269)
T d1xu9a_ 171 DGFFSSIRKEYSVSRVNVSITLCVLGLI 198 (269)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEEECCB
T ss_pred HHHHHHHHHHhhhcCCCEEEEEEecCcC
Confidence 1111122222 235789999999987
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.33 E-value=5.4e-12 Score=107.64 Aligned_cols=142 Identities=11% Similarity=0.075 Sum_probs=94.8
Q ss_pred CCCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
++.+|+++||||+| +||++++++|+++|++|++..|+++..+.. .......+++|++|+++++++++
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF 84 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc
Confidence 45689999999998 899999999999999999988886543221 23467789999999988877653
Q ss_pred -CCCEEEEcCc---h------H----------HH--------HHHHh-----CCCCEEEEecccccccCCCCcccccchh
Q 024643 163 -GVRSIICPSE---G------F----------IS--------NAGSL-----KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 -~~d~vi~~~~---~------~----------~~--------~aa~~-----~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
.+|++|++.. . + .. ..++. ..-.++|++||.......+....|..++
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (256)
T d1ulua_ 85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAK 164 (256)
T ss_dssp SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHH
Confidence 5888887611 0 0 00 01111 1125899999988765544333332222
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+....++..+|++++.|.||++.
T Consensus 165 aal~~ltr~lA~ela~~gIrVN~I~PG~i~ 194 (256)
T d1ulua_ 165 AALEASVRYLAYELGPKGVRVNAISAGPVR 194 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC-
T ss_pred HHHHHHHHHHHHHhcccCCEEeeeccceee
Confidence 1 122233444455689999999999864
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.33 E-value=5.5e-13 Score=113.98 Aligned_cols=137 Identities=12% Similarity=0.040 Sum_probs=93.1
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-------HcCCCEEEEcC--
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-------LRGVRSIICPS-- 171 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-------~~~~d~vi~~~-- 171 (265)
+++||||+++||+++++.|+++|++|++.+|+.++.+++.......+++|+.|.+++.++ +..+|++|++.
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~ 81 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF 81 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence 789999999999999999999999999999988776655332334456777766554443 34789999651
Q ss_pred -c---hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHHHHH
Q 024643 172 -E---GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESM 220 (265)
Q Consensus 172 -~---~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~E~~ 220 (265)
. .+ +...+++.+-.+||++||.....+.+....|...+. ....+.+..+
T Consensus 82 ~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e 161 (252)
T d1zmta1 82 APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKE 161 (252)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHH
Confidence 0 00 111256667789999999987655443333322221 1223344445
Q ss_pred HHhCCCCEEEEeCCCcc
Q 024643 221 LMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 221 l~~~gl~~tivRPg~l~ 237 (265)
+..+|++++.|.||++.
T Consensus 162 la~~gIrVN~I~PG~i~ 178 (252)
T d1zmta1 162 LGEYNIPVFAIGPNYLH 178 (252)
T ss_dssp HGGGTCCEEEEEESSBC
T ss_pred hcccCcEEEEEecCCCc
Confidence 56789999999999874
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.32 E-value=1.3e-11 Score=104.87 Aligned_cols=72 Identities=24% Similarity=0.285 Sum_probs=60.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHc---------CC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALR---------GV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~---------~~ 164 (265)
.++||||||+++||++++++|+++|+ +|++.+|+.++++++ .+.++.++++|++|.++++++++ ++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 48999999999999999999999995 788889998877654 34578999999999988876542 37
Q ss_pred CEEEEc
Q 024643 165 RSIICP 170 (265)
Q Consensus 165 d~vi~~ 170 (265)
|++|++
T Consensus 83 dilinn 88 (250)
T d1yo6a1 83 SLLINN 88 (250)
T ss_dssp CEEEEC
T ss_pred EEEEEc
Confidence 899976
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.31 E-value=6.6e-12 Score=107.44 Aligned_cols=75 Identities=16% Similarity=0.179 Sum_probs=60.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
++.+|+||||||+++||+++++.|+++|++|++..|+.++ .+.. .+.++..+.+|++|++++++.++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999987765533 2221 35578899999999988887664
Q ss_pred -CCCEEEEc
Q 024643 163 -GVRSIICP 170 (265)
Q Consensus 163 -~~d~vi~~ 170 (265)
.+|++|++
T Consensus 83 g~idilinn 91 (259)
T d1ja9a_ 83 GGLDFVMSN 91 (259)
T ss_dssp SCEEEEECC
T ss_pred CCCcEEEec
Confidence 57888876
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.30 E-value=1.9e-11 Score=105.23 Aligned_cols=142 Identities=11% Similarity=0.103 Sum_probs=91.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh------cCCccEEeeeCCCCHHHHHHHHc------
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES------FGTYVESMAGDASNKKFLKTALR------ 162 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~------~~~~v~~i~~D~~d~~~l~~~~~------ 162 (265)
.+.+|+++||||+++||+++++.|+++|++|++.+|+.+. +++. .+..+.++++|++|++++.+.++
T Consensus 15 sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 94 (272)
T d1g0oa_ 15 SLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF 94 (272)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999887543 2221 34578899999999988876653
Q ss_pred -CCCEEEEcCc-----h--------H-------------HHHH-HHh-CCCCEEEEecccccccCCCCc-ccccchhH--
Q 024643 163 -GVRSIICPSE-----G--------F-------------ISNA-GSL-KGVQHVILLSQLSVYRGSGGI-QALMKGNA-- 210 (265)
Q Consensus 163 -~~d~vi~~~~-----~--------~-------------~~~a-a~~-~gv~r~V~iSS~~v~~~~~~~-~~~~~~~~-- 210 (265)
.+|+++++.. . + +..+ ... ..-+++++++|........+. ..|...+.
T Consensus 95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal 174 (272)
T d1g0oa_ 95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAI 174 (272)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHH
T ss_pred CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 6798887611 0 0 0001 111 122577777776543222211 11211111
Q ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 211 RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 211 ~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
....+.....+...|++++.|.||++.
T Consensus 175 ~~ltk~lA~e~~~~gIrVN~I~PG~v~ 201 (272)
T d1g0oa_ 175 ETFARCMAIDMADKKITVNVVAPGGIK 201 (272)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBS
T ss_pred HHHHHHHHHHhchhCeEEEEEccCCcC
Confidence 112233334455689999999999873
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.30 E-value=6.4e-12 Score=107.39 Aligned_cols=136 Identities=11% Similarity=0.055 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEEeCCcchhhh--------cCCccEEeeeCCCCHHHHHHHHc---
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKRNAMES--------FGTYVESMAGDASNKKFLKTALR--- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~~~R~~~~~~~~--------~~~~v~~i~~D~~d~~~l~~~~~--- 162 (265)
+.++.++||||+++||++++++|++ +|++|++++|+.++++++ .+..+..+++|++|++++.++++
T Consensus 4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~ 83 (259)
T d1oaaa_ 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR 83 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 4578899999999999999999986 799999999998765543 13367889999999998887653
Q ss_pred --------CCCEEEEcCc-------h---------H-------------HHHH----HHhCC--CCEEEEecccccccCC
Q 024643 163 --------GVRSIICPSE-------G---------F-------------ISNA----GSLKG--VQHVILLSQLSVYRGS 199 (265)
Q Consensus 163 --------~~d~vi~~~~-------~---------~-------------~~~a----a~~~g--v~r~V~iSS~~v~~~~ 199 (265)
..|+++++.+ + + +..+ +++.+ ..+||++||.....+.
T Consensus 84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~ 163 (259)
T d1oaaa_ 84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY 163 (259)
T ss_dssp HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC
Confidence 1334554310 0 0 0011 22232 3589999998876554
Q ss_pred CCcccccchhHHHHHHHHHHHH-----HhCCCCEEEEeCCCcc
Q 024643 200 GGIQALMKGNARKLAEQDESML-----MASGIPYTIIRTGVLQ 237 (265)
Q Consensus 200 ~~~~~~~~~~~~~~k~~~E~~l-----~~~gl~~tivRPg~l~ 237 (265)
+....|.. .|..++.+. ...|++++.|.||++.
T Consensus 164 ~~~~~Y~a-----sKaal~~lt~~la~e~~gIrVn~v~PG~i~ 201 (259)
T d1oaaa_ 164 KGWGLYCA-----GKAARDMLYQVLAAEEPSVRVLSYAPGPLD 201 (259)
T ss_dssp TTCHHHHH-----HHHHHHHHHHHHHHHCTTEEEEEEECCSBS
T ss_pred ccchHHHH-----HHHHHHHHHHHHHhCCCCCEEEEEEcCCCC
Confidence 43323322 332222221 2479999999999874
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.27 E-value=5.9e-12 Score=110.41 Aligned_cols=142 Identities=11% Similarity=0.015 Sum_probs=94.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc---------hhhh---cCCccEEeeeCCCCHHHHHHHH--
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN---------AMES---FGTYVESMAGDASNKKFLKTAL-- 161 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~---------~~~~---~~~~v~~i~~D~~d~~~l~~~~-- 161 (265)
+..+|+++||||+++||+++++.|+++|++|++.+|+.+. +++. .......+.+|+.|.+++++++
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~ 83 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKT 83 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHH
Confidence 4568999999999999999999999999999999876432 1111 1123445667887766554433
Q ss_pred -----cCCCEEEEcCc-----hH-------------------------HHHHHHhCCCCEEEEecccccccCCCCccccc
Q 024643 162 -----RGVRSIICPSE-----GF-------------------------ISNAGSLKGVQHVILLSQLSVYRGSGGIQALM 206 (265)
Q Consensus 162 -----~~~d~vi~~~~-----~~-------------------------~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~ 206 (265)
..+|++|++.+ .+ +...+++.+-.+||++||..+..+.+....|.
T Consensus 84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~ 163 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS 163 (302)
T ss_dssp HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence 36899998611 00 11226667778999999988765544333333
Q ss_pred chhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 207 KGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 207 ~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.++. ....+.+..++..+|++++.|.||++.
T Consensus 164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~ 196 (302)
T d1gz6a_ 164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGS 196 (302)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCC
Confidence 2221 122233344455689999999999863
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.26 E-value=6.6e-11 Score=100.10 Aligned_cols=142 Identities=16% Similarity=0.145 Sum_probs=95.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHH-------cCCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTAL-------RGVR 165 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~-------~~~d 165 (265)
..++|+++||||+++||++++++|+++|++|++++|+.+++++. ..........|+.+.+.+.... ...|
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVD 81 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCccccccccccccccccccccccccccccc
Confidence 35689999999999999999999999999999999998776544 3556788889999887665433 3456
Q ss_pred EEEEc-----Cc--------------hH-------------HHHH----HH------hCCCCEEEEecccccccCCCCcc
Q 024643 166 SIICP-----SE--------------GF-------------ISNA----GS------LKGVQHVILLSQLSVYRGSGGIQ 203 (265)
Q Consensus 166 ~vi~~-----~~--------------~~-------------~~~a----a~------~~gv~r~V~iSS~~v~~~~~~~~ 203 (265)
..+.. .. .+ +..+ +. ..+..+||++||.....+.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~ 161 (248)
T d2o23a1 82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA 161 (248)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence 65543 00 00 0011 11 12445899999998876544333
Q ss_pred cccchhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 204 ALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 204 ~~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.|...+. ....+....++..+|++++.|.||++.
T Consensus 162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~ 197 (248)
T d2o23a1 162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFG 197 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCcee
Confidence 3332221 123334444556689999999999863
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.17 E-value=2.4e-11 Score=104.67 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=59.6
Q ss_pred CCE-EEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCCcchhhh------cCCccEEeeeCCCCHHHHHHHH-------cC
Q 024643 99 RDA-VLVTDGDSDIGQMVILSLIVK-RTRIKALVKDKRNAMES------FGTYVESMAGDASNKKFLKTAL-------RG 163 (265)
Q Consensus 99 ~~~-vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~~~~~~~------~~~~v~~i~~D~~d~~~l~~~~-------~~ 163 (265)
+|+ ++||||+++||++++++|+++ |++|++.+|+.+++++. .+..+.++++|++|.+++++++ ..
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 344 589999999999999999986 89999999998775432 3557899999999999887654 36
Q ss_pred CCEEEEc
Q 024643 164 VRSIICP 170 (265)
Q Consensus 164 ~d~vi~~ 170 (265)
+|++|++
T Consensus 82 iDiLVnN 88 (275)
T d1wmaa1 82 LDVLVNN 88 (275)
T ss_dssp EEEEEEC
T ss_pred cEEEEEc
Confidence 8998876
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.14 E-value=1.9e-10 Score=96.11 Aligned_cols=131 Identities=17% Similarity=0.249 Sum_probs=86.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc------CCCEEEEc---
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR------GVRSIICP--- 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~------~~d~vi~~--- 170 (265)
|+++||||+++||++++++|+++|++|++.+|+.+.. ....+++|+.+......+.. ..+.++..
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV 75 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc------cceEeeccccchhhhHHHHHhhhccccccchhhhhhc
Confidence 7899999999999999999999999999999987543 45678899998876655442 12222221
Q ss_pred -------Cc------hH---HHH---------------H------HHhCCCCEEEEecccccccCCCCcccccchhH--H
Q 024643 171 -------SE------GF---ISN---------------A------GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--R 211 (265)
Q Consensus 171 -------~~------~~---~~~---------------a------a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~ 211 (265)
.. .. ..+ . +.+.+..+||++||.....+.+....|...+. .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~ 155 (241)
T d1uaya_ 76 GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVV 155 (241)
T ss_dssp CCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred cccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHH
Confidence 00 00 000 0 12234569999999987665443333332221 1
Q ss_pred HHHHHHHHHHHhCCCCEEEEeCCCc
Q 024643 212 KLAEQDESMLMASGIPYTIIRTGVL 236 (265)
Q Consensus 212 ~~k~~~E~~l~~~gl~~tivRPg~l 236 (265)
...+....++..+|++++.|.||++
T Consensus 156 ~lt~~lA~ela~~gIrVN~V~PG~i 180 (241)
T d1uaya_ 156 ALTLPAARELAGWGIRVVTVAPGLF 180 (241)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSC
T ss_pred HHHHHHHHHHhhcCCceeeecCCcc
Confidence 2233344455668999999999986
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.08 E-value=1.4e-10 Score=97.60 Aligned_cols=129 Identities=15% Similarity=0.136 Sum_probs=82.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHH-------HHc--CCCEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKT-------ALR--GVRSIIC 169 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~-------~~~--~~d~vi~ 169 (265)
+|+|+||||+++||+++++.|+++|++|.+++++..... .....+..|..+.+.... .+. .+|.+|+
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lIn 77 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 77 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEE
Confidence 689999999999999999999999999999988764321 223445556655544332 222 3788887
Q ss_pred cCch--------------H--H-----------HHH-HHh-CCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHH
Q 024643 170 PSEG--------------F--I-----------SNA-GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESM 220 (265)
Q Consensus 170 ~~~~--------------~--~-----------~~a-a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~ 220 (265)
+.+. + . ..+ ... .+-.+||++||.....+.+....|. ..|...+.+
T Consensus 78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~-----asKaal~~l 152 (236)
T d1dhra_ 78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYG-----MAKGAVHQL 152 (236)
T ss_dssp CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHH-----HHHHHHHHH
T ss_pred CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccH-----HHHHHHHHH
Confidence 6210 0 0 000 110 1236899999988765544332222 244444444
Q ss_pred HH---------hCCCCEEEEeCCCc
Q 024643 221 LM---------ASGIPYTIIRTGVL 236 (265)
Q Consensus 221 l~---------~~gl~~tivRPg~l 236 (265)
.+ ..|++++.|.||++
T Consensus 153 t~~la~El~~~~~gI~vn~v~PG~v 177 (236)
T d1dhra_ 153 CQSLAGKNSGMPSGAAAIAVLPVTL 177 (236)
T ss_dssp HHHHTSTTSSCCTTCEEEEEEESCE
T ss_pred HHHHHHHhccCCCcEEEEEEEeccC
Confidence 32 25899999999986
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=4.7e-10 Score=94.99 Aligned_cols=141 Identities=11% Similarity=0.068 Sum_probs=91.3
Q ss_pred CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 97 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
+.+|+++||||++ +||+++++.|+++|++|++.+|+++..+.. .......+..|+.+..++.+.+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4689999999998 899999999999999999999986543321 23456778889999887766553
Q ss_pred CCCEEEEcC----c-h-------------H----------HHHHHHh-----CCCCEEEEecccccccCCCCcccccchh
Q 024643 163 GVRSIICPS----E-G-------------F----------ISNAGSL-----KGVQHVILLSQLSVYRGSGGIQALMKGN 209 (265)
Q Consensus 163 ~~d~vi~~~----~-~-------------~----------~~~aa~~-----~gv~r~V~iSS~~v~~~~~~~~~~~~~~ 209 (265)
..|.++++. . . + ....++. .+-+.+|++||.+...+.+....|...+
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sK 162 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK 162 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHH
Confidence 356777651 0 0 0 0000111 2234688889887654433322232222
Q ss_pred H--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 210 A--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 210 ~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
. ....+.+..++..+|++++.|+||++.
T Consensus 163 aal~~ltr~lA~el~~~gIrVN~I~PG~i~ 192 (258)
T d1qsga_ 163 ASLEANVRYMANAMGPEGVRVNAISAGPIR 192 (258)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHHhCccCceeecccccccc
Confidence 1 123334444556689999999999873
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.08 E-value=9e-11 Score=95.84 Aligned_cols=77 Identities=12% Similarity=0.077 Sum_probs=66.8
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc-----CCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF-----GTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~-----~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
..+..+++|+||||+|+||+.+++.|+++|++|++++|+.++.++.. ...+....+|+.|.+++.+++.++|++|
T Consensus 18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili 97 (191)
T d1luaa1 18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF 97 (191)
T ss_dssp TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence 34667899999999999999999999999999999999987765431 2345678899999999999999999999
Q ss_pred Ec
Q 024643 169 CP 170 (265)
Q Consensus 169 ~~ 170 (265)
++
T Consensus 98 n~ 99 (191)
T d1luaa1 98 TA 99 (191)
T ss_dssp EC
T ss_pred ec
Confidence 87
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.07 E-value=8.2e-10 Score=94.29 Aligned_cols=74 Identities=9% Similarity=-0.034 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCCcchhhh-----cCCccEEeeeCCCCHHHHHHHH-------c
Q 024643 97 EARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDKRNAMES-----FGTYVESMAGDASNKKFLKTAL-------R 162 (265)
Q Consensus 97 ~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-----~~~~v~~i~~D~~d~~~l~~~~-------~ 162 (265)
+.+|++|||||+| +||++++++|+++|++|++.+|+++..+.. ......++..|+++.+++.+++ .
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 4689999999887 799999999999999999999986432221 3456778899999988877665 3
Q ss_pred CCCEEEEc
Q 024643 163 GVRSIICP 170 (265)
Q Consensus 163 ~~d~vi~~ 170 (265)
.+|.++++
T Consensus 83 ~id~lV~n 90 (274)
T d2pd4a1 83 SLDFIVHS 90 (274)
T ss_dssp CEEEEEEC
T ss_pred CCCeEEee
Confidence 57888876
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.02 E-value=7.1e-10 Score=94.55 Aligned_cols=131 Identities=15% Similarity=0.048 Sum_probs=74.7
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcc--hhhhcCCccEEeeeCCCCHHHH-HHH-----HcCCCEEEEcCc
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRN--AMESFGTYVESMAGDASNKKFL-KTA-----LRGVRSIICPSE 172 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~--~~~~~~~~v~~i~~D~~d~~~l-~~~-----~~~~d~vi~~~~ 172 (265)
||||||+||||++|+++|+++|+ +|+++++-... ...+... ...|..+.+.+ ... +..++.+++...
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL----NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS----CCSEEEEHHHHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc----chhhhccchHHHHHHhhhhcccchhhhhhhcc
Confidence 89999999999999999999995 68887632221 1111111 11233333322 222 245677777521
Q ss_pred --------h------------HHHHHHHhCCCCEEEEecccccccCCCCc-----ccccchhHH-HHHHHHHHHHH----
Q 024643 173 --------G------------FISNAGSLKGVQHVILLSQLSVYRGSGGI-----QALMKGNAR-KLAEQDESMLM---- 222 (265)
Q Consensus 173 --------~------------~~~~aa~~~gv~r~V~iSS~~v~~~~~~~-----~~~~~~~~~-~~k~~~E~~l~---- 222 (265)
. .+..++...+++.+ +.||..++...... ....+...| ..|..+|.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~v-~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~ 156 (307)
T d1eq2a_ 78 CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFL-YASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILP 156 (307)
T ss_dssp CCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCCEE-EEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred ccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccchhhhhcccccc
Confidence 0 13334566777654 45544444332211 111122223 36767776664
Q ss_pred hCCCCEEEEeCCCcc
Q 024643 223 ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 223 ~~gl~~tivRPg~l~ 237 (265)
+.+++++++||..+.
T Consensus 157 ~~~~~~~~~r~~~vy 171 (307)
T d1eq2a_ 157 EANSQIVGFRYFNVY 171 (307)
T ss_dssp GCSSCEEEEEECEEE
T ss_pred ccccccccccceeEe
Confidence 479999999999754
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.99 E-value=4.8e-10 Score=94.11 Aligned_cols=129 Identities=10% Similarity=0.073 Sum_probs=81.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHH-------HHH--cCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLK-------TAL--RGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~-------~~~--~~~d~vi~~ 170 (265)
.+|+||||+++||++++++|+++|++|++++|++.... .....+.+|..+.+... ..+ ..+|++|++
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn 78 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV 78 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence 57999999999999999999999999999999875432 22334556665544333 222 347889876
Q ss_pred Cch--------------H----HH---------HH-HHh-CCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHH
Q 024643 171 SEG--------------F----IS---------NA-GSL-KGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESML 221 (265)
Q Consensus 171 ~~~--------------~----~~---------~a-a~~-~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l 221 (265)
.+. + .. .+ ... .+-.+||++||.....+.+....|. ..|..++.+.
T Consensus 79 AG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~-----asKaal~~l~ 153 (235)
T d1ooea_ 79 AGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYG-----MAKAAVHHLT 153 (235)
T ss_dssp CCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHH-----HHHHHHHHHH
T ss_pred CcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchH-----HHHHHHHHHH
Confidence 210 0 00 00 010 1226899999988766544332222 2454444443
Q ss_pred H---------hCCCCEEEEeCCCcc
Q 024643 222 M---------ASGIPYTIIRTGVLQ 237 (265)
Q Consensus 222 ~---------~~gl~~tivRPg~l~ 237 (265)
+ ..+++++.|.||++.
T Consensus 154 ~~la~e~~~~~~~i~v~~i~Pg~~~ 178 (235)
T d1ooea_ 154 SSLAAKDSGLPDNSAVLTIMPVTLD 178 (235)
T ss_dssp HHHHSTTSSCCTTCEEEEEEESCBC
T ss_pred HHHHHHhccCCCceEEEEEecCcCc
Confidence 2 146789999999863
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=98.97 E-value=2.1e-09 Score=91.14 Aligned_cols=75 Identities=11% Similarity=0.055 Sum_probs=57.4
Q ss_pred CCCCCEEEEEcCC--cHHHHHHHHHHHHCCCeEEEEEeCCcchh----hhcCCccEEeeeCCCCHHHHHHHHc-------
Q 024643 96 EEARDAVLVTDGD--SDIGQMVILSLIVKRTRIKALVKDKRNAM----ESFGTYVESMAGDASNKKFLKTALR------- 162 (265)
Q Consensus 96 ~~~~~~vlVtGat--G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~----~~~~~~v~~i~~D~~d~~~l~~~~~------- 162 (265)
.+.+|+++||||+ .+||++++++|+++|++|++.+|+..+.. +..+.....+++|+.+.+++..+++
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 3568999999965 46999999999999999999999886542 2245567889999999876654432
Q ss_pred ---CCCEEEEc
Q 024643 163 ---GVRSIICP 170 (265)
Q Consensus 163 ---~~d~vi~~ 170 (265)
..|.++++
T Consensus 83 ~~~~ld~~i~~ 93 (268)
T d2h7ma1 83 AGNKLDGVVHS 93 (268)
T ss_dssp TTCCEEEEEEC
T ss_pred cCCCcceeeec
Confidence 25677765
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=98.94 E-value=5.3e-09 Score=89.32 Aligned_cols=137 Identities=9% Similarity=-0.010 Sum_probs=85.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc-hhhh-------cCCccE-----------------EeeeCCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN-AMES-------FGTYVE-----------------SMAGDASN 153 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~-~~~~-------~~~~v~-----------------~i~~D~~d 153 (265)
.+.++||||+++||++++++|+++|++|++.+|+.+. .+.+ .+.... ...+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 4578999999999999999999999999998876532 2111 122233 34556888
Q ss_pred HHHHHHHH-------cCCCEEEEcCch-------------H----------------HHH-----------H--------
Q 024643 154 KKFLKTAL-------RGVRSIICPSEG-------------F----------------ISN-----------A-------- 178 (265)
Q Consensus 154 ~~~l~~~~-------~~~d~vi~~~~~-------------~----------------~~~-----------a-------- 178 (265)
.+++++++ ..+|++|++.+. + +.+ .
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 88877665 468999976110 0 000 0
Q ss_pred --HHhCCCCEEEEecccccccCCCCcccccchhH--HHHHHHHHHHHHhCCCCEEEEeCCC
Q 024643 179 --GSLKGVQHVILLSQLSVYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGV 235 (265)
Q Consensus 179 --a~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~ 235 (265)
++..+..++|.++|.....+......|...+. ....+.+..++...|++++.|.||+
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~ 222 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGL 222 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESS
T ss_pred HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccc
Confidence 11223457888888776554433323322221 1233344455667899999999997
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=98.84 E-value=2.5e-08 Score=84.07 Aligned_cols=138 Identities=14% Similarity=0.092 Sum_probs=83.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhh-------cCCccEEeeeCCCC----HHHHHH-------H
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MES-------FGTYVESMAGDASN----KKFLKT-------A 160 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~-------~~~~v~~i~~D~~d----~~~l~~-------~ 160 (265)
+++|||||+++||++++++|+++|++|++.+|+.++. +.+ .+.....++.|..+ .+.+.+ .
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999987543 211 23455566655543 333333 3
Q ss_pred HcCCCEEEEcCc-----hH------------------HHH--------------HH---------HhCCCCEEEEecccc
Q 024643 161 LRGVRSIICPSE-----GF------------------ISN--------------AG---------SLKGVQHVILLSQLS 194 (265)
Q Consensus 161 ~~~~d~vi~~~~-----~~------------------~~~--------------aa---------~~~gv~r~V~iSS~~ 194 (265)
+..+|++|++.+ .+ ... .. .......++.+++..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 346999997611 00 000 00 012234667777766
Q ss_pred cccCCCCcccccchhH--HHHHHHHHHHHHhCCCCEEEEeCCCcc
Q 024643 195 VYRGSGGIQALMKGNA--RKLAEQDESMLMASGIPYTIIRTGVLQ 237 (265)
Q Consensus 195 v~~~~~~~~~~~~~~~--~~~k~~~E~~l~~~gl~~tivRPg~l~ 237 (265)
.....+....|..++. ....+.+..++...|++++.|.||++.
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~ 206 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSL 206 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEe
Confidence 6544433323322221 122233444455689999999999863
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.78 E-value=1.2e-08 Score=77.83 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=72.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHH-HcCCCEEEEcCch----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTA-LRGVRSIICPSEG---- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~~---- 173 (265)
|+|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.. .++.++.+|.+|++.+.++ ++.++.++.++..
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~~N 79 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVN 79 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHHHH
Confidence 79999999 999999999999999999999999987765532 2678999999999999887 5889999877322
Q ss_pred -HHHHHHHhCCCCEEEE
Q 024643 174 -FISNAGSLKGVQHVIL 189 (265)
Q Consensus 174 -~~~~aa~~~gv~r~V~ 189 (265)
.....++..+.+++|-
T Consensus 80 ~~~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 80 LMSSLLAKSYGINKTIA 96 (132)
T ss_dssp HHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHcCCceEEE
Confidence 1223356778877764
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.70 E-value=1.2e-08 Score=85.83 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=47.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--------cCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--------RGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--------~~~d~vi~~ 170 (265)
+|.|+||||+++||++++++|+++|++|++++|+.... ..|+.+.+...... ...|.++++
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~ 69 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------IADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE-----------ECCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH-----------HHHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence 46789999999999999999999999999999876432 34676665544332 247888865
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.60 E-value=1e-07 Score=72.36 Aligned_cols=91 Identities=9% Similarity=0.065 Sum_probs=73.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcCc-h----
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPSE-G---- 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~~-~---- 173 (265)
|+++|.|+ |.+|+.+++.|.+.|++|++++.++++.+.+.......+.+|.+|++.+.++ ++.+|.+|.+.+ .
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~ 79 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 79 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhH
Confidence 46888988 9999999999999999999999999988887777788899999999999887 788999887732 1
Q ss_pred -HHHHHHHhCCCCEEEEec
Q 024643 174 -FISNAGSLKGVQHVILLS 191 (265)
Q Consensus 174 -~~~~aa~~~gv~r~V~iS 191 (265)
.....++..+..+++-..
T Consensus 80 ~~~~~~~~~~~~~~iiar~ 98 (134)
T d2hmva1 80 TLTTLLLKELDIPNIWVKA 98 (134)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCcEEeec
Confidence 122334666777766444
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.33 E-value=3.9e-06 Score=71.45 Aligned_cols=39 Identities=13% Similarity=-0.031 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCCc--HHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 95 PEEARDAVLVTDGDS--DIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 95 ~~~~~~~vlVtGatG--~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
.++.+|+++||||+| +||+++++.|+++|++|++..|+.
T Consensus 4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~ 44 (297)
T d1d7oa_ 4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP 44 (297)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence 356789999999987 899999999999999999999864
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.19 E-value=3.3e-06 Score=65.96 Aligned_cols=72 Identities=10% Similarity=0.066 Sum_probs=59.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--CccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--TYVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.++|+|.|| |.+|+.+++.|.++||+|++++|+.+++..+.. ........+..+.......+...|.++.+.
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~ 75 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLI 75 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeec
Confidence 578999998 999999999999999999999999998877633 234445566777788888889999888763
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.11 E-value=1.1e-06 Score=68.99 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=36.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
|||.|+||+|.+|+.+++.|++.||+|++.+|++++++.+
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK 40 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 7899999999999999999999999999999998776543
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.98 E-value=4.6e-05 Score=58.56 Aligned_cols=72 Identities=21% Similarity=0.338 Sum_probs=60.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc----hhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN----AMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~----~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
+.+|+|.|. |.+|+.+++.|.++|++|+++..++++ .+.....++.++.||.+|++.+.++ ++.++.++.++
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~ 79 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEcc
Confidence 457999999 899999999999999999999998854 3344567899999999999998765 47899999873
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.94 E-value=4.6e-05 Score=66.07 Aligned_cols=35 Identities=11% Similarity=0.107 Sum_probs=31.1
Q ss_pred CCEEEEEc--CCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 99 RDAVLVTD--GDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 99 ~~~vlVtG--atG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
.+.+|||| ++.+||+.+++.|+++|++|++..++.
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~ 38 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence 57899999 557999999999999999999988764
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.83 E-value=1.9e-05 Score=62.15 Aligned_cols=95 Identities=11% Similarity=0.059 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchHHHH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGFISN 177 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~~~~ 177 (265)
++.+|+|+||+|.+|...++.+...|++|+++++++++.+....-+++.+ .|..+...-....+++|++|-+.+..+.+
T Consensus 27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~~-i~~~~~~~~~~~~~g~D~v~d~~G~~~~~ 105 (171)
T d1iz0a2 27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEEA-ATYAEVPERAKAWGGLDLVLEVRGKEVEE 105 (171)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSEE-EEGGGHHHHHHHTTSEEEEEECSCTTHHH
T ss_pred CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccccee-eehhhhhhhhhccccccccccccchhHHH
Confidence 57899999999999999999999999999999998877665433333322 25555433334457899999774444444
Q ss_pred HHHhC-CCCEEEEeccc
Q 024643 178 AGSLK-GVQHVILLSQL 193 (265)
Q Consensus 178 aa~~~-gv~r~V~iSS~ 193 (265)
+.+.. .-.++|.++..
T Consensus 106 ~~~~l~~~G~~v~~G~~ 122 (171)
T d1iz0a2 106 SLGLLAHGGRLVYIGAA 122 (171)
T ss_dssp HHTTEEEEEEEEEC---
T ss_pred HHHHHhcCCcEEEEeCC
Confidence 43321 22478887654
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.83 E-value=1.9e-05 Score=62.06 Aligned_cols=73 Identities=14% Similarity=0.014 Sum_probs=51.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcC--------CccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFG--------TYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~--------~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.++|.|.|+ |.+|..++..|.++||+|.+++|++++.+.... +..+..........++.++++++|.+|++
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~ 79 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 79 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEE
Confidence 378999999 999999999999999999999999876554321 11111111111112356788999999988
Q ss_pred Cc
Q 024643 171 SE 172 (265)
Q Consensus 171 ~~ 172 (265)
.+
T Consensus 80 v~ 81 (184)
T d1bg6a2 80 VP 81 (184)
T ss_dssp SC
T ss_pred Ec
Confidence 43
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.74 E-value=7.1e-05 Score=57.60 Aligned_cols=91 Identities=15% Similarity=0.041 Sum_probs=53.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G----~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~ 174 (265)
+++|.|.||||++|+++++.|+++. .+++++.++...........-.....+..+.+ .++++|++|++.+.-
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~----~~~~~DivF~a~~~~ 76 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLE----ALKALDIIVTCQGGD 76 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHH----HHHTCSEEEECSCHH
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchh----hhhcCcEEEEecCch
Confidence 4689999999999999999988764 46666666543322111111112223334433 367899999884432
Q ss_pred ----HHHHHHhCCCC-EEEEeccc
Q 024643 175 ----ISNAGSLKGVQ-HVILLSQL 193 (265)
Q Consensus 175 ----~~~aa~~~gv~-r~V~iSS~ 193 (265)
....+.++|.+ .+|=.||.
T Consensus 77 ~s~~~~~~~~~~g~~~~VID~Ss~ 100 (146)
T d1t4ba1 77 YTNEIYPKLRESGWQGYWIDAASS 100 (146)
T ss_dssp HHHHHHHHHHHTTCCCEEEECSST
T ss_pred HHHHhhHHHHhcCCCeecccCCcc
Confidence 22334556664 34444443
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.71 E-value=6.5e-06 Score=63.81 Aligned_cols=67 Identities=10% Similarity=0.068 Sum_probs=47.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--CCc--cEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--GTY--VESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--~~~--v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|||+|.|+ |.+|..++..|.+.||+|++++|+.++..... ... .........+. +.+..+|.+|++.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~iii~v 71 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP----DFLATSDLLLVTL 71 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH----HHHHTCSEEEECS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchh----hhhcccceEEEee
Confidence 79999999 99999999999999999999999886544321 111 11111111233 3456899999883
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.70 E-value=4.7e-05 Score=59.76 Aligned_cols=95 Identities=16% Similarity=0.136 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHH---HHHHH--cCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKF---LKTAL--RGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~---l~~~~--~~~d~vi~~~~ 172 (265)
++.+|+|+||+|.+|...++.+...|++|+++++++++.+....-+...+ .|..+.+. +.+.. +++|+++.+.+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~v-i~~~~~~~~~~i~~~t~~~g~d~v~d~~g 106 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAHEV-FNHREVNYIDKIKKYVGEKGIDIIIEMLA 106 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE-EETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccccCcccc-cccccccHHHHhhhhhccCCceEEeeccc
Confidence 46799999999999999999999999999999998876554433333222 35555443 33333 35898887743
Q ss_pred h-HHHHHHHh-CCCCEEEEeccc
Q 024643 173 G-FISNAGSL-KGVQHVILLSQL 193 (265)
Q Consensus 173 ~-~~~~aa~~-~gv~r~V~iSS~ 193 (265)
+ .+..+.+. ..-.++|.++..
T Consensus 107 ~~~~~~~~~~l~~~G~iv~~G~~ 129 (174)
T d1yb5a2 107 NVNLSKDLSLLSHGGRVIVVGSR 129 (174)
T ss_dssp HHHHHHHHHHEEEEEEEEECCCC
T ss_pred HHHHHHHHhccCCCCEEEEEecC
Confidence 3 23332222 222588888643
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.69 E-value=0.00019 Score=56.52 Aligned_cols=99 Identities=13% Similarity=0.123 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEe--eeCCCCHHHHHHHH--cCCCEEEEcCch
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESM--AGDASNKKFLKTAL--RGVRSIICPSEG 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i--~~D~~d~~~l~~~~--~~~d~vi~~~~~ 173 (265)
++.+|+|+||+|.+|...++.....|++|+++++++++.+.....+...+ .-|-...+.+.+.. +++|++|.+.++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGG 108 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEEEETTSCSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhhcccccccHHHHHHHHhhcCCCceeEEecCc
Confidence 57899999999999999999999999999999999877655433333322 22333344444444 469999987443
Q ss_pred -HHHHHHHhC-CCCEEEEecccccc
Q 024643 174 -FISNAGSLK-GVQHVILLSQLSVY 196 (265)
Q Consensus 174 -~~~~aa~~~-gv~r~V~iSS~~v~ 196 (265)
.....+... .-.+++.++..+.+
T Consensus 109 ~~~~~~~~~l~~~G~~v~~G~~~~~ 133 (182)
T d1v3va2 109 EFLNTVLSQMKDFGKIAICGAISVY 133 (182)
T ss_dssp HHHHHHGGGEEEEEEEEECCCGGGT
T ss_pred hhhhhhhhhccCCCeEEeecceeec
Confidence 333332221 22478887766554
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.66 E-value=6.7e-05 Score=59.02 Aligned_cols=97 Identities=15% Similarity=0.111 Sum_probs=65.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH---HHHHHHH--cCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK---KFLKTAL--RGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~---~~l~~~~--~~~d~vi~~~~ 172 (265)
++.+|+|+||+|.+|...++.+...|++|+++++++++.+.+...+...+ .|..+. +.+.+.. +++|++|.+.+
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~~v-i~~~~~~~~~~v~~~t~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYGVDVVLNSLA 103 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccccc-ccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence 46799999999999999999999999999999998877665544444432 344443 3344443 46899998733
Q ss_pred -hHHHHHHHhC-CCCEEEEeccccc
Q 024643 173 -GFISNAGSLK-GVQHVILLSQLSV 195 (265)
Q Consensus 173 -~~~~~aa~~~-gv~r~V~iSS~~v 195 (265)
..+..+.+.. .-.++|.++....
T Consensus 104 ~~~~~~~~~~l~~~G~~v~~G~~~~ 128 (183)
T d1pqwa_ 104 GEAIQRGVQILAPGGRFIELGKKDV 128 (183)
T ss_dssp THHHHHHHHTEEEEEEEEECSCGGG
T ss_pred chHHHHHHHHhcCCCEEEEEccCCC
Confidence 3333333321 2258888865443
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.62 E-value=0.00015 Score=56.19 Aligned_cols=63 Identities=14% Similarity=0.049 Sum_probs=50.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|- |.+|+.+++.|+++||+|++.+|++++.+.+...+... ..+ ..++++++|.+|.+
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~----~~~---~~e~~~~~d~ii~~ 63 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAET----AST---AKAIAEQCDVIITM 63 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEE----CSS---HHHHHHHCSEEEEC
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhh----ccc---HHHHHhCCCeEEEE
Confidence 68999988 99999999999999999999999998877665444432 123 45677889999987
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.58 E-value=6.8e-05 Score=58.22 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=48.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
|+|.|.|. |.+|..+++.|.++||+|++++|+++..+.....++.....| + .++++++|.||.+.+
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~--~----~~~~~~~DiIilavp 66 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQ--D----LSLLQTAKIIFLCTP 66 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEES--C----GGGGTTCSEEEECSC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeee--e----cccccccccccccCc
Confidence 78999988 999999999999999999999999876554332222101111 1 136789999998843
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.57 E-value=0.00023 Score=54.72 Aligned_cols=93 Identities=13% Similarity=0.024 Sum_probs=53.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC----CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR----TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G----~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~- 174 (265)
|+|.|.||||++|++|++.|+++. .++..++.+...-+......-.....+..|. ..++++|++|++.+.-
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~~----~~~~~~DvvF~alp~~~ 76 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDI----ESLKQLDAVITCQGGSY 76 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTCH----HHHTTCSEEEECSCHHH
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccch----hhhccccEEEEecCchH
Confidence 789999999999999999988754 3555555433211111100111111223343 3468899999984432
Q ss_pred ---HHHHHHhCCCC-EEEEecccccc
Q 024643 175 ---ISNAGSLKGVQ-HVILLSQLSVY 196 (265)
Q Consensus 175 ---~~~aa~~~gv~-r~V~iSS~~v~ 196 (265)
+.....++|.+ .+|=.|+..=.
T Consensus 77 s~~~~~~l~~~g~~~~VIDlSsdfR~ 102 (147)
T d1mb4a1 77 TEKVYPALRQAGWKGYWIDAASTLRM 102 (147)
T ss_dssp HHHHHHHHHHTTCCSEEEESSSTTTT
T ss_pred HHHHhHHHHHcCCceEEEeCCccccc
Confidence 23334567765 56666765433
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=0.00036 Score=50.99 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=55.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHc--CCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALR--GVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~--~~d~vi~~ 170 (265)
...+|.|.|| |.+|+.++....+.|++|++++.+++...... .-+.+.+|+.|.+.+.++.. .+|+|-.-
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v--a~~~i~~~~~d~~~l~~~~~~~~~DviT~E 81 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV--AHRSHVINMLDGDALRRVVELEKPHYIVPE 81 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG--SSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc--CCeEEECCCCCHHHHHHHHHhhCCceEEEE
Confidence 3568999997 99999999999999999999998875432211 23678899999999988774 56877654
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.54 E-value=7.2e-05 Score=59.33 Aligned_cols=100 Identities=12% Similarity=-0.006 Sum_probs=62.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCH-HHHHHHH--cCCCEEEEc-Cch
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNK-KFLKTAL--RGVRSIICP-SEG 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~-~~l~~~~--~~~d~vi~~-~~~ 173 (265)
.+.+|||+||+|++|...++.+...|.+|++.++++++.+.....+...+ .|..+. +...+.. +++|+||-+ .+.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~v-i~~~~~~~~~~~~~~~~gvD~vid~vgg~ 109 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKEV-LAREDVMAERIRPLDKQRWAAAVDPVGGR 109 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSEE-EECC---------CCSCCEEEEEECSTTT
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccccee-eecchhHHHHHHHhhccCcCEEEEcCCch
Confidence 35789999999999999999998999999999999887665433333222 133322 1222222 468888866 333
Q ss_pred HHHHHHHh-CCCCEEEEecccccccC
Q 024643 174 FISNAGSL-KGVQHVILLSQLSVYRG 198 (265)
Q Consensus 174 ~~~~aa~~-~gv~r~V~iSS~~v~~~ 198 (265)
.+...... +.-.|+|.++.......
T Consensus 110 ~~~~~l~~l~~~Griv~~G~~~g~~~ 135 (176)
T d1xa0a2 110 TLATVLSRMRYGGAVAVSGLTGGAEV 135 (176)
T ss_dssp THHHHHHTEEEEEEEEECSCCSSSCC
T ss_pred hHHHHHHHhCCCceEEEeecccCccc
Confidence 33333322 22358998888755443
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.48 E-value=0.00011 Score=57.58 Aligned_cols=97 Identities=9% Similarity=0.023 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH---HHHHHH--cCCCEEEEc-C
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---FLKTAL--RGVRSIICP-S 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---~l~~~~--~~~d~vi~~-~ 171 (265)
++.+|+|+||+|.+|..+++.+...|++|+++++++++.+.....+.+.+ .|..+.+ .+.+.- +++|+++.+ .
T Consensus 28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~v-i~~~~~d~~~~v~~~t~g~g~d~v~d~~g 106 (179)
T d1qora2 28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQV-INYREEDLVERLKEITGGKKVRVVYDSVG 106 (179)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSEE-EETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeEE-EECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence 46799999999999999999999999999999999987665433233322 3555543 344433 357888877 3
Q ss_pred chHHHHHHHhC-CCCEEEEeccccc
Q 024643 172 EGFISNAGSLK-GVQHVILLSQLSV 195 (265)
Q Consensus 172 ~~~~~~aa~~~-gv~r~V~iSS~~v 195 (265)
+.......... .-.+++..+....
T Consensus 107 ~~~~~~~~~~l~~~G~~v~~g~~~~ 131 (179)
T d1qora2 107 RDTWERSLDCLQRRGLMVSFGNSSG 131 (179)
T ss_dssp GGGHHHHHHTEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCeeeecccccC
Confidence 33333332222 1247777665544
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.47 E-value=9.1e-05 Score=55.24 Aligned_cols=69 Identities=19% Similarity=0.256 Sum_probs=58.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHH-HcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTA-LRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~-~~~~d~vi~~~ 171 (265)
+.++|.|. |.+|+++++.| ++++|.++..+++..+.....++.++.+|.+|++.+.++ ++.++.++.+.
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~ 70 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNL 70 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEec
Confidence 46889997 88999999998 477888999998887776667899999999999998875 47889999873
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.44 E-value=0.0001 Score=57.44 Aligned_cols=69 Identities=17% Similarity=0.144 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....++|+|.|+ |.+|+.+++.|...|+ ++++..|+.+++..+... +.++ .+.+++.+.+..+|+||.+
T Consensus 21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-----~~~~~~~~~l~~~Divi~a 91 (159)
T d1gpja2 21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-----VRFDELVDHLARSDVVVSA 91 (159)
T ss_dssp CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-----CCGGGHHHHHHTCSEEEEC
T ss_pred CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-----ccchhHHHHhccCCEEEEe
Confidence 345789999998 9999999999999997 699999998877655321 2232 2345677889999999988
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=0.00048 Score=48.29 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=56.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc----
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MESFGTYVESMAGDASNKKFLKTALRGVRSIICP---- 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~---- 170 (265)
+..+++|+|.|. |..|..+++.|.++|++|++.+.+.... .......+.++.+.. +. ..+.++|.+|..
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGSL-ND----EWLMAADLIVASPGIA 75 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESBC-CH----HHHHHCSEEEECTTSC
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeeccc-ch----hhhccCCEEEECCCCC
Confidence 346789999999 8899999999999999999999865422 222334455555543 22 235678988876
Q ss_pred CchHHHHHHHhCCCC
Q 024643 171 SEGFISNAGSLKGVQ 185 (265)
Q Consensus 171 ~~~~~~~aa~~~gv~ 185 (265)
........+++.|++
T Consensus 76 ~~~~~~~~a~~~gi~ 90 (93)
T d2jfga1 76 LAHPSLSAAADAGIE 90 (93)
T ss_dssp TTSHHHHHHHHTTCE
T ss_pred CCCHHHHHHHHcCCC
Confidence 122344455677764
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.42 E-value=8.9e-05 Score=50.75 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=36.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME 138 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~ 138 (265)
++.+|+|+||+|++|...++.+...|++|+++++++++.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~ 71 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEY 71 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHH
Confidence 46789999999999999999989999999999999877653
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.00066 Score=53.51 Aligned_cols=74 Identities=8% Similarity=0.047 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
..+++|+|.|+ |+.|+.++..|...|. +++++.|+.++.+... .........|+.+.+.+.+.+..+|.+
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 35689999999 8999999999999995 8889999876544321 123445578899999999999999999
Q ss_pred EEcC
Q 024643 168 ICPS 171 (265)
Q Consensus 168 i~~~ 171 (265)
|.++
T Consensus 95 IN~T 98 (182)
T d1vi2a1 95 TNGT 98 (182)
T ss_dssp EECS
T ss_pred cccc
Confidence 9884
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.32 E-value=0.00053 Score=54.14 Aligned_cols=94 Identities=10% Similarity=-0.067 Sum_probs=54.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcc---hhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCch-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRN---AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEG- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~---~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~- 173 (265)
|++|.|.||||++|+++++.|.++. .++..+..+... .....+...........+.+. ..+++|.+|++.+.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~~~~~~---~~~~~dvvf~a~p~~ 77 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSEFDPEK---VSKNCDVLFTALPAG 77 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBCCCHHH---HHHHCSEEEECCSTT
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccccCHhH---hccccceEEEccccH
Confidence 4689999999999999999998865 577666543322 111111111111222345443 44689999988432
Q ss_pred HHHHHHHhCCCCEEEEeccccc
Q 024643 174 FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 174 ~~~~aa~~~gv~r~V~iSS~~v 195 (265)
...+.+.+..-.++|=+|+..-
T Consensus 78 ~s~~~~~~~~~~~VIDlSadfR 99 (176)
T d1vkna1 78 ASYDLVRELKGVKIIDLGADFR 99 (176)
T ss_dssp HHHHHHTTCCSCEEEESSSTTT
T ss_pred HHHHHHHhhccceEEecCcccc
Confidence 2222223322346777776544
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.27 E-value=0.00027 Score=54.15 Aligned_cols=73 Identities=15% Similarity=0.055 Sum_probs=51.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcC-CccEEeeeCCCCHHHHHHHHcCCCEEEEc-CchHHH
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFG-TYVESMAGDASNKKFLKTALRGVRSIICP-SEGFIS 176 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~-~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~~~~ 176 (265)
|+|.+.|+ |.+|.++++.|++.| ++|.+.+|++++.+.+.. .++... -|.. .+..+|.||++ .+..+.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-------~v~~~Div~lavkP~~~~ 71 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-------ELHSDDVLILAVKPQDME 71 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-------CCCTTSEEEECSCHHHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-------cccccceEEEecCHHHHH
Confidence 78999998 999999999999888 999999999987765532 234332 1221 24668999987 444455
Q ss_pred HHHHh
Q 024643 177 NAGSL 181 (265)
Q Consensus 177 ~aa~~ 181 (265)
+.+++
T Consensus 72 ~v~~~ 76 (152)
T d1yqga2 72 AACKN 76 (152)
T ss_dssp HHHTT
T ss_pred HhHHH
Confidence 55444
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.26 E-value=0.0012 Score=50.94 Aligned_cols=64 Identities=8% Similarity=0.062 Sum_probs=49.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
+++|.|.|- |.+|..+++.|+++||+|.+.+|+.++.+.+...+... .....++++.+|.++.+
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~-------~~~~~e~~~~~diii~~ 64 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASA-------ARSARDAVQGADVVISM 64 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEE-------CSSHHHHHTSCSEEEEC
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccc-------cchhhhhccccCeeeec
Confidence 467999987 99999999999999999999999988766554333221 12345678889999876
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.21 E-value=0.00021 Score=54.90 Aligned_cols=79 Identities=8% Similarity=-0.021 Sum_probs=56.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEc-CchHHHH
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICP-SEGFISN 177 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~~~~~ 177 (265)
|+|.|.|+ |.+|+++++.|++.|++|++..|+.++.+++... ++.+ ..+ ..++++.+|+||++ .+..+.+
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~----~~~---~~~~~~~~dvIilavkp~~~~~ 72 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY----AMS---HQDLIDQVDLVILGIKPQLFET 72 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB----CSS---HHHHHHTCSEEEECSCGGGHHH
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee----ech---hhhhhhccceeeeecchHhHHH
Confidence 78999988 9999999999999999999999998776654211 2221 123 45567899999987 4555556
Q ss_pred HHHhCCCCE
Q 024643 178 AGSLKGVQH 186 (265)
Q Consensus 178 aa~~~gv~r 186 (265)
+++.-.-+.
T Consensus 73 vl~~l~~~~ 81 (152)
T d2ahra2 73 VLKPLHFKQ 81 (152)
T ss_dssp HHTTSCCCS
T ss_pred Hhhhcccce
Confidence 555433333
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.19 E-value=0.0013 Score=51.26 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=54.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEE-eeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVES-MAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~-i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.+|.|.|- |.+|..+++.|+++||+|++.+|++++.+++....... ...-....+.+...+..+|.++.+
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~ 73 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILL 73 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEEC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEe
Confidence 46899998 99999999999999999999999998877653222110 001145677888889999999876
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.19 E-value=0.0013 Score=47.56 Aligned_cols=88 Identities=11% Similarity=0.108 Sum_probs=62.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh-h-cCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC-c
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME-S-FGTYVESMAGDASNKKFLKTALRGVRSIICPS-E 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~-~-~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~-~ 172 (265)
+..+++|+|.|+ |.+|..-++.|++.|++|++++........ + ....++++..++.+. .+.+++.++.++ .
T Consensus 9 ~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----dl~~~~lv~~at~d 82 (113)
T d1pjqa1 9 QLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET-----LLDSCWLAIAATDD 82 (113)
T ss_dssp CCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG-----GGTTCSEEEECCSC
T ss_pred EeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCHH-----HhCCCcEEeecCCC
Confidence 456789999999 999999999999999999999876643221 2 234688888777652 367889888773 2
Q ss_pred hH----HHHHHHhCCCCEEEEec
Q 024643 173 GF----ISNAGSLKGVQHVILLS 191 (265)
Q Consensus 173 ~~----~~~aa~~~gv~r~V~iS 191 (265)
.. +...|++.|+ +|.+.
T Consensus 83 ~~~n~~i~~~a~~~~i--lVNv~ 103 (113)
T d1pjqa1 83 DTVNQRVSDAAESRRI--FCNVV 103 (113)
T ss_dssp HHHHHHHHHHHHHTTC--EEEET
T ss_pred HHHHHHHHHHHHHcCC--EEEeC
Confidence 22 3334555553 56544
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.15 E-value=0.00031 Score=53.70 Aligned_cols=63 Identities=8% Similarity=0.018 Sum_probs=46.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|||.|.|. |.+|+.+++.|+++|++|++.+++..+.......++.+. + +..++++.+|.||.+
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~-----~~~e~~~~~diIi~~ 63 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGVT--E-----TSEEDVYSCPVVISA 63 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTCE--E-----CCHHHHHTSSEEEEC
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhccccc--c-----cHHHHHhhcCeEEEE
Confidence 68999977 999999999999999999998887765443322222211 1 234578899999987
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.15 E-value=0.0011 Score=50.64 Aligned_cols=66 Identities=8% Similarity=0.143 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHcCCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
..+|||.|.|+ |.+|..++..|+.+| .+|+++++++++++.. .........+|+ +.++++|
T Consensus 3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~-------~~~~~ad 74 (146)
T d1ez4a1 3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY-------SDCKDAD 74 (146)
T ss_dssp TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG-------GGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH-------HHhcccc
Confidence 34789999997 999999999999988 6899999987653311 222344555554 2478999
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
+|+.+
T Consensus 75 ivvit 79 (146)
T d1ez4a1 75 LVVIT 79 (146)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99987
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.14 E-value=0.00021 Score=55.66 Aligned_cols=72 Identities=10% Similarity=0.061 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
++.+|+|+|+ |.+|...++.+...|++|+++++++++.+....-+...+.-...+.+..++..+++|.++.+
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~~i~~~~~~~~~~~~~~~~d~vi~~ 98 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVC 98 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSEEEEGGGTSCHHHHSCSCEEEEEEC
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcEEeeccchHHHHHhhhcccceEEEE
Confidence 4679999997 99999999888889999999999988766543222322211112334445556788988876
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.11 E-value=0.00032 Score=53.44 Aligned_cols=40 Identities=13% Similarity=0.195 Sum_probs=35.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~ 136 (265)
...++|.|.||.|.+|..+++.|.++||+|.+.+|+....
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV 46 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence 3467899999999999999999999999999999876543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.11 E-value=0.00012 Score=58.51 Aligned_cols=73 Identities=12% Similarity=0.053 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhc--------CCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESF--------GTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~--------~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
.+++|.|.|| |..|.+++..|...||+|++.+|+++..+.+. .++++. .-++.-...+.++++++|.+|.
T Consensus 6 ~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~iii 83 (189)
T d1n1ea2 6 YLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEIILF 83 (189)
T ss_dssp CEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCEEE
T ss_pred eeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccccc-ccccccchhhhhccCCCCEEEE
Confidence 3457999999 99999999999999999999999987654331 112211 0011111246788999999998
Q ss_pred cCc
Q 024643 170 PSE 172 (265)
Q Consensus 170 ~~~ 172 (265)
+.+
T Consensus 84 avP 86 (189)
T d1n1ea2 84 VIP 86 (189)
T ss_dssp CSC
T ss_pred cCc
Confidence 844
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.00012 Score=57.93 Aligned_cols=97 Identities=8% Similarity=-0.042 Sum_probs=61.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--cCCCEEEEc-CchHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP-SEGFI 175 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--~~~d~vi~~-~~~~~ 175 (265)
+.+|+|+||+|++|...++.....|++|+++++++++.+.+...+...+ .|..+.+. .+.+ ...|.++-+ .+..+
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGad~v-i~~~~~~~-~~~l~~~~~~~vvD~Vgg~~~ 109 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRV-LPRDEFAE-SRPLEKQVWAGAIDTVGDKVL 109 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTEEEE-EEGGGSSS-CCSSCCCCEEEEEESSCHHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhccccc-cccccHHH-HHHHHhhcCCeeEEEcchHHH
Confidence 3589999999999999999999999999999999988665433333332 23222211 1222 224677765 33333
Q ss_pred HHHHHhC-CCCEEEEeccccccc
Q 024643 176 SNAGSLK-GVQHVILLSQLSVYR 197 (265)
Q Consensus 176 ~~aa~~~-gv~r~V~iSS~~v~~ 197 (265)
....... .-.|+|.++....+.
T Consensus 110 ~~~l~~l~~~Griv~~G~~~~~~ 132 (177)
T d1o89a2 110 AKVLAQMNYGGCVAACGLAGGFT 132 (177)
T ss_dssp HHHHHTEEEEEEEEECCCTTCSC
T ss_pred HHHHHHhccccceEeecccCCcc
Confidence 3333332 234899888765543
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.08 E-value=0.00065 Score=51.75 Aligned_cols=91 Identities=15% Similarity=0.075 Sum_probs=52.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF- 174 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~- 174 (265)
.|+|.|.||||++|+++++.|.+++ .++..+..+....+......-+....++.+ ..+.++|.+|++.+.-
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~~~~~~~~~~~-----~~~~~~d~vf~a~p~~~ 76 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDS-----FDFSSVGLAFFAAAAEV 76 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETTEEEECEEGGG-----CCGGGCSEEEECSCHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeeccccchhccchh-----hhhccceEEEecCCcch
Confidence 4789999999999999999998765 466666554432221111111111112111 2356899999884432
Q ss_pred ---HHHHHHhCCCCEEEEeccccc
Q 024643 175 ---ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 175 ---~~~aa~~~gv~r~V~iSS~~v 195 (265)
......+.| .++|-.|+..-
T Consensus 77 s~~~~~~~~~~g-~~VID~Ss~fR 99 (144)
T d2hjsa1 77 SRAHAERARAAG-CSVIDLSGALE 99 (144)
T ss_dssp HHHHHHHHHHTT-CEEEETTCTTT
T ss_pred hhhhccccccCC-ceEEeechhhc
Confidence 222234455 36776676543
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.07 E-value=0.00039 Score=54.82 Aligned_cols=79 Identities=8% Similarity=0.000 Sum_probs=52.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc--hhhhcCC------ccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN--AMESFGT------YVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~--~~~~~~~------~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
|+|.|.|+ |..|..++..|.+.|++|.+.+|+.+. .+..... .......++.-.+++.++++++|.++.+.
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 79999999 999999999999999999999985432 2222111 11111111222456788899999999883
Q ss_pred c-hHHHHHH
Q 024643 172 E-GFISNAG 179 (265)
Q Consensus 172 ~-~~~~~aa 179 (265)
+ ..+.+.+
T Consensus 80 ps~~~~~~~ 88 (180)
T d1txga2 80 STDGVLPVM 88 (180)
T ss_dssp CGGGHHHHH
T ss_pred chhhhHHHH
Confidence 3 3344443
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.04 E-value=0.002 Score=49.53 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCcc-EEeeeCC--CCHHHHHHHH-----cCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYV-ESMAGDA--SNKKFLKTAL-----RGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v-~~i~~D~--~d~~~l~~~~-----~~~d~vi~ 169 (265)
++.+|+|+| +|.+|...++.+...|.+|+++++++++.+....-+. ..+..|- .+...+.+.+ .++|++|-
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid 104 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTID 104 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEE
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeee
Confidence 456899998 5899999999999999999999999887654432222 2222222 3444444333 46899997
Q ss_pred cC--chHHHHHHHh-CCCCEEEEecc
Q 024643 170 PS--EGFISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 170 ~~--~~~~~~aa~~-~gv~r~V~iSS 192 (265)
+. +..+..+.+. ..-.++++++.
T Consensus 105 ~~g~~~~~~~a~~~~~~~G~iv~~G~ 130 (170)
T d1e3ja2 105 CSGNEKCITIGINITRTGGTLMLVGM 130 (170)
T ss_dssp CSCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred cCCChHHHHHHHHHHhcCCceEEEec
Confidence 73 2334444333 23358888874
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.04 E-value=0.00059 Score=52.85 Aligned_cols=94 Identities=12% Similarity=0.060 Sum_probs=64.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC--chHH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--EGFI 175 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~--~~~~ 175 (265)
++.+|+|.|+ |.+|...++.+...|+++++++++.++.+....-+... ..|..+.+......+++|.+|.+. +..+
T Consensus 30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~-~i~~~~~~~~~~~~~~~D~vid~~g~~~~~ 107 (168)
T d1uufa2 30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE-VVNSRNADEMAAHLKSFDFILNTVAAPHNL 107 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-EEETTCHHHHHTTTTCEEEEEECCSSCCCH
T ss_pred CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcE-EEECchhhHHHHhcCCCceeeeeeecchhH
Confidence 5789999997 89999999988889999999999887765332222222 246777777777778999999772 2234
Q ss_pred HHHHHhCC-CCEEEEeccc
Q 024643 176 SNAGSLKG-VQHVILLSQL 193 (265)
Q Consensus 176 ~~aa~~~g-v~r~V~iSS~ 193 (265)
..+..... -.+++.++..
T Consensus 108 ~~~~~~l~~~G~iv~~G~~ 126 (168)
T d1uufa2 108 DDFTTLLKRDGTMTLVGAP 126 (168)
T ss_dssp HHHHTTEEEEEEEEECCCC
T ss_pred HHHHHHHhcCCEEEEeccC
Confidence 44433222 2478877643
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.02 E-value=0.0047 Score=47.55 Aligned_cols=94 Identities=10% Similarity=-0.009 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCcc-EEeeeCCCCHHHHHHHH-----cCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDASNKKFLKTAL-----RGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v-~~i~~D~~d~~~l~~~~-----~~~d~vi~~ 170 (265)
++.+|+|.|+ |.+|...+..+...|+ +|+++++++++.+....-+. .++..+-.+.....+.+ .++|++|.+
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~ 104 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 104 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEec
Confidence 4568999987 9999999999999998 79999999887654432233 23334445555554443 368999977
Q ss_pred Cc--hHHHHHHHhC-CCCEEEEecc
Q 024643 171 SE--GFISNAGSLK-GVQHVILLSQ 192 (265)
Q Consensus 171 ~~--~~~~~aa~~~-gv~r~V~iSS 192 (265)
.+ ..+..+.+.. .-.++++++.
T Consensus 105 ~G~~~~~~~a~~~~~~gG~iv~~G~ 129 (171)
T d1pl8a2 105 TGAEASIQAGIYATRSGGTLVLVGL 129 (171)
T ss_dssp SCCHHHHHHHHHHSCTTCEEEECSC
T ss_pred cCCchhHHHHHHHhcCCCEEEEEec
Confidence 33 3344443332 2358888874
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.96 E-value=0.0002 Score=57.61 Aligned_cols=70 Identities=7% Similarity=-0.093 Sum_probs=49.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCC-------------CCHHHHHHHHcCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-------------SNKKFLKTALRGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~-------------~d~~~l~~~~~~~d~ 166 (265)
|+|.|.|. |++|..++..|+++||+|++++.+.++.+.+......+.+-++ .-..++.++++++|.
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 78999977 9999999999999999999999998776655322221111111 001124456788999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
++.+
T Consensus 80 i~i~ 83 (202)
T d1mv8a2 80 SFIC 83 (202)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9977
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.89 E-value=0.0029 Score=49.30 Aligned_cols=94 Identities=9% Similarity=0.029 Sum_probs=58.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCcc-EEeeeCCCCHHHH-HHH---H--cCCCEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDASNKKFL-KTA---L--RGVRSIIC 169 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v-~~i~~D~~d~~~l-~~~---~--~~~d~vi~ 169 (265)
++.+|+|+|+ |.+|...++.+...|+ +|+++++++++.+....-+. .++.-.-.+.... +++ . .++|+||-
T Consensus 28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvid 106 (182)
T d1vj0a2 28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILE 106 (182)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred CCCEEEEECC-CccchhheecccccccccccccccccccccccccccceEEEeccccchHHHHHHHHHhhCCCCceEEee
Confidence 4679999997 8999999999999997 89999999887654432222 2222211233222 222 2 35899997
Q ss_pred cC--chHHHHHHHhC-CCCEEEEecc
Q 024643 170 PS--EGFISNAGSLK-GVQHVILLSQ 192 (265)
Q Consensus 170 ~~--~~~~~~aa~~~-gv~r~V~iSS 192 (265)
+. +..+..+.+.. .-.++++++-
T Consensus 107 ~vG~~~~~~~a~~~l~~~G~iv~~G~ 132 (182)
T d1vj0a2 107 ATGDSRALLEGSELLRRGGFYSVAGV 132 (182)
T ss_dssp CSSCTTHHHHHHHHEEEEEEEEECCC
T ss_pred cCCchhHHHHHHHHhcCCCEEEEEee
Confidence 73 23333333322 2257887763
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.86 E-value=0.001 Score=51.99 Aligned_cols=68 Identities=18% Similarity=0.190 Sum_probs=56.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+|+|.|+ |-.|..-++.....|.+|++++.+.++.+++ .+..++.. ..+.+.+.+.++.+|.||.+
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~~aDivI~a 102 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVAEADLLIGA 102 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhccCcEEEEe
Confidence 468999999 9999999999999999999999998776554 33344433 46788899999999999977
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.86 E-value=0.0034 Score=48.72 Aligned_cols=69 Identities=12% Similarity=0.129 Sum_probs=49.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCC-----ccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGT-----YVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~-----~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
|+|.|.|- |.+|..+++.|+++||+|.+.+|++++.+.+... ...... ...+.+.+...+...+.++.+
T Consensus 2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 75 (178)
T d1pgja2 2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLK-AFETMEAFAASLKKPRKALIL 75 (178)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEE-ECSCHHHHHHHBCSSCEEEEC
T ss_pred CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchh-hhhhhhHHHHhcccceEEEEe
Confidence 68999987 9999999999999999999999999887655211 011111 134556666677777766654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.84 E-value=0.00083 Score=51.20 Aligned_cols=69 Identities=19% Similarity=0.219 Sum_probs=47.3
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh--cCCc-cEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES--FGTY-VESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~--~~~~-v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
||.|+||+|.+|+.++..|..+| -++++++.++.+.+.+ .+.. ...... ........+.++++|+|+.+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVit 75 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKG-YLGPEQLPDCLKGCDVVVIP 75 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEEC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEEC
Confidence 79999999999999999999888 4788888876554332 1111 111111 11234456778999999987
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.79 E-value=0.00088 Score=52.14 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=37.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
..+++|+|.|+ |+.+++++..|.+.|.+|+++.|+.++++.+
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l 57 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEEL 57 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHH
Confidence 35789999999 8999999999999999999999998877654
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.79 E-value=0.0031 Score=48.29 Aligned_cols=93 Identities=10% Similarity=0.073 Sum_probs=58.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC---HHHHHHHHcCCCEEEEc--Cc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN---KKFLKTALRGVRSIICP--SE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d---~~~l~~~~~~~d~vi~~--~~ 172 (265)
++.+|+|.|+ |.+|...++.+...|++|+++++++++.+....-+.+.+ .|..+ .+.+.+...+.+.++.+ .+
T Consensus 27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~~~-i~~~~~~~~~~~~~~~~g~~~~i~~~~~~ 104 (166)
T d1llua2 27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLT-VNARQEDPVEAIQRDIGGAHGVLVTAVSN 104 (166)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EETTTSCHHHHHHHHHSSEEEEEECCSCH
T ss_pred CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCcccc-ccccchhHHHHHHHhhcCCcccccccccc
Confidence 4678999987 999999999888899999999999877654432232221 23333 23444555566666654 33
Q ss_pred hHHHHHHHhC-CCCEEEEecc
Q 024643 173 GFISNAGSLK-GVQHVILLSQ 192 (265)
Q Consensus 173 ~~~~~aa~~~-gv~r~V~iSS 192 (265)
..+..+.+.. .-.+++.++-
T Consensus 105 ~~~~~~~~~l~~~G~iv~~G~ 125 (166)
T d1llua2 105 SAFGQAIGMARRGGTIALVGL 125 (166)
T ss_dssp HHHHHHHTTEEEEEEEEECCC
T ss_pred hHHHHHHHHhcCCcEEEEEEe
Confidence 3343433322 1247787763
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=96.71 E-value=0.0033 Score=51.19 Aligned_cols=70 Identities=6% Similarity=0.066 Sum_probs=49.5
Q ss_pred CCCCCEEEEEc----------------CCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHH----
Q 024643 96 EEARDAVLVTD----------------GDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKK---- 155 (265)
Q Consensus 96 ~~~~~~vlVtG----------------atG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~---- 155 (265)
++.+++||||+ .||.+|.+|++++..+|++|+++.-..... .+..+..+.. ...+
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~---~p~~~~~~~~--~t~~~m~~ 77 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP---TPPFVKRVDV--MTALEMEA 77 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC---CCTTEEEEEC--CSHHHHHH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC---ccccccccee--hhhHHHHH
Confidence 34567777776 589999999999999999999987654321 3345665554 3333
Q ss_pred HHHHHHcCCCEEEEc
Q 024643 156 FLKTALRGVRSIICP 170 (265)
Q Consensus 156 ~l~~~~~~~d~vi~~ 170 (265)
.+.+.+..+|++|++
T Consensus 78 ~~~~~~~~~D~~i~a 92 (223)
T d1u7za_ 78 AVNASVQQQNIFIGC 92 (223)
T ss_dssp HHHHHGGGCSEEEEC
T ss_pred HHHhhhccceeEeee
Confidence 344555789999876
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.67 E-value=0.00041 Score=54.71 Aligned_cols=32 Identities=16% Similarity=0.129 Sum_probs=27.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV 130 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~ 130 (265)
|++|.|.||||++|++|++.|..+ .+++..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 578999999999999999999997 46776553
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0005 Score=54.42 Aligned_cols=99 Identities=15% Similarity=0.106 Sum_probs=53.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEE-EEeCCcchhhhc-CCccEEeeeCCCC--H-HHHHHHH-cCCCEEEEcCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKA-LVKDKRNAMESF-GTYVESMAGDASN--K-KFLKTAL-RGVRSIICPSE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~-~~R~~~~~~~~~-~~~v~~i~~D~~d--~-~~l~~~~-~~~d~vi~~~~ 172 (265)
+.+|+|+||+|.+|...++.....|.++++ .+++.++...+. ..+.+ ...|..+ . +.+++.. +++|++|-+.+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad-~vi~~~~~~~~~~~~~~~~~GvDvv~D~vG 109 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD-AAVNYKTGNVAEQLREACPGGVDVYFDNVG 109 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS-EEEETTSSCHHHHHHHHCTTCEEEEEESSC
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce-EEeeccchhHHHHHHHHhccCceEEEecCC
Confidence 368999999999999999998889976555 455544433221 11211 2234443 2 2333332 47999997744
Q ss_pred h-HHHHHHHh-CCCCEEEEecccccccC
Q 024643 173 G-FISNAGSL-KGVQHVILLSQLSVYRG 198 (265)
Q Consensus 173 ~-~~~~aa~~-~gv~r~V~iSS~~v~~~ 198 (265)
+ .....+.. ..-.|++.++..+.+..
T Consensus 110 g~~~~~~~~~l~~~G~iv~~G~~s~~~~ 137 (187)
T d1vj1a2 110 GDISNTVISQMNENSHIILCGQISQYNK 137 (187)
T ss_dssp HHHHHHHHTTEEEEEEEEEC--------
T ss_pred chhHHHHhhhccccccEEEecccccccc
Confidence 3 33333322 22358898887665533
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.60 E-value=0.00061 Score=53.20 Aligned_cols=94 Identities=13% Similarity=0.035 Sum_probs=60.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-----cCCCEEEEc-Cc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-----RGVRSIICP-SE 172 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-----~~~d~vi~~-~~ 172 (265)
+.+|||+||+|++|...++.....|++|+++++++++.+.+...+.+.+ .|.. +...+.+ +++|.++-+ .+
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~v-i~~~--~~~~~~~~~~~~~gvd~vid~vgg 100 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEV-ISRE--DVYDGTLKALSKQQWQGAVDPVGG 100 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEE-EEHH--HHCSSCCCSSCCCCEEEEEESCCT
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccce-Eecc--chhchhhhcccCCCceEEEecCcH
Confidence 4579999999999999999888899999999999988765533333322 1211 1111111 467888866 43
Q ss_pred hHHHHHHHhC-CCCEEEEeccccc
Q 024643 173 GFISNAGSLK-GVQHVILLSQLSV 195 (265)
Q Consensus 173 ~~~~~aa~~~-gv~r~V~iSS~~v 195 (265)
..+......- .-.++|.++..+.
T Consensus 101 ~~~~~~~~~l~~~G~iv~~G~~~g 124 (167)
T d1tt7a2 101 KQLASLLSKIQYGGSVAVSGLTGG 124 (167)
T ss_dssp HHHHHHHTTEEEEEEEEECCCSSC
T ss_pred HHHHHHHHHhccCceEEEeeccCC
Confidence 4444433322 2247888776654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.56 E-value=0.0042 Score=47.15 Aligned_cols=67 Identities=9% Similarity=0.094 Sum_probs=46.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCc--chh----hh------cCCccEEeeeCCCCHHHHHHHHcCCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR--NAM----ES------FGTYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~--~~~----~~------~~~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
|||.|+||+|.+|+.++..|+.++ .++.++++++. +++ .+ ....++....--.|. +.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----RIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG----GGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH----HHhccce
Confidence 789999999999999999999998 59999998753 222 11 122333332222232 3578999
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
+|+.+
T Consensus 77 vVVit 81 (145)
T d1hyea1 77 VVIIT 81 (145)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 99987
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.52 E-value=0.0098 Score=44.05 Aligned_cols=58 Identities=14% Similarity=0.021 Sum_probs=38.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
|+|.|.|++|.+|+.+++.+.++|+++++..-... .+.+... . +..|++.|+.+.+.+
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~-~~~~~~~--D-VvIDFS~p~~~~~~l 58 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNG-VEELDSP--D-VVIDFSSPEALPKTV 58 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTE-EEECSCC--S-EEEECSCGGGHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCc-HHHhccC--C-EEEEecCHHHHHHHH
Confidence 68999999999999999999999998876432211 1111111 1 345777776655444
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.41 E-value=0.0037 Score=47.54 Aligned_cols=65 Identities=15% Similarity=0.194 Sum_probs=46.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhh----------cCCccEEeeeCCCCHHHHHHHHcCCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVR 165 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~----------~~~~v~~i~~D~~d~~~l~~~~~~~d 165 (265)
.++||.|+|| |.+|..++..|+.+|. ++.++++++++++.. ....+.+...|. +.++++|
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~-------~~l~daD 76 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY-------DDCRDAD 76 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG-------GGTTTCS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH-------HHhccce
Confidence 4678999997 9999999999999884 799999887653211 122344444443 3477888
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
.|+.+
T Consensus 77 vvvit 81 (148)
T d1ldna1 77 LVVIC 81 (148)
T ss_dssp EEEEC
T ss_pred eEEEe
Confidence 88876
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.40 E-value=0.0013 Score=51.94 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEe
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVK 131 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R 131 (265)
++.+|.|.||||++|++|++.|..+. .++..+..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S 38 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA 38 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence 46789999999999999999999875 56666653
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.32 E-value=0.0064 Score=46.29 Aligned_cols=93 Identities=12% Similarity=0.091 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCC-CC-HHHHHHHHcCCCEEEEc--Cch
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA-SN-KKFLKTALRGVRSIICP--SEG 173 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~-~d-~~~l~~~~~~~d~vi~~--~~~ 173 (265)
++.+|+|.|+ |.+|...++.+...|++|+++++++++.+....-+.+.+...- .| .+.+.+...+.+.++.+ .+.
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 105 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP 105 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcceecccccchhhhhcccccCCCceEEeecCCHH
Confidence 4678999976 9999999999999999999999988876654333444333222 12 24456666777777765 333
Q ss_pred HHHHHHHhCC-CCEEEEec
Q 024643 174 FISNAGSLKG-VQHVILLS 191 (265)
Q Consensus 174 ~~~~aa~~~g-v~r~V~iS 191 (265)
.+..+..... -.+++.++
T Consensus 106 ~~~~a~~~l~~~G~i~~~g 124 (168)
T d1rjwa2 106 AFQSAYNSIRRGGACVLVG 124 (168)
T ss_dssp HHHHHHHHEEEEEEEEECC
T ss_pred HHHHHHHHhccCCceEecc
Confidence 3444433322 24666665
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=96.31 E-value=0.0039 Score=47.11 Aligned_cols=64 Identities=14% Similarity=0.218 Sum_probs=42.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhh----hcC-----CccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAME----SFG-----TYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~----~~~-----~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
++||.|+|+ |.+|..++..|+.++ .++.++++++++++. +.+ .......+| .+.++++|+|
T Consensus 1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-------~~~~~~adiv 72 (142)
T d1y6ja1 1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD-------YSDVKDCDVI 72 (142)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C-------GGGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc-------HHHhCCCceE
Confidence 368999998 999999999999998 489999988865322 111 122333222 2357889988
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+.+
T Consensus 73 vit 75 (142)
T d1y6ja1 73 VVT 75 (142)
T ss_dssp EEC
T ss_pred EEe
Confidence 876
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.27 E-value=0.0025 Score=49.09 Aligned_cols=95 Identities=9% Similarity=0.087 Sum_probs=58.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCcc-EEeeeCCCCH-HHHHHHH--cCCCEEEEcCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYV-ESMAGDASNK-KFLKTAL--RGVRSIICPSE 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v-~~i~~D~~d~-~~l~~~~--~~~d~vi~~~~ 172 (265)
++.+|+|+|++|.+|...+..+...| .+|++.++++++.+....-+. .++..+-.|. +.+.+.. .++|++|.+.+
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g 106 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNN 106 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence 46789999999999999999999888 588899988876554322222 2333222232 2333332 35889987733
Q ss_pred -h-HHHHHHHhC-CCCEEEEecc
Q 024643 173 -G-FISNAGSLK-GVQHVILLSQ 192 (265)
Q Consensus 173 -~-~~~~aa~~~-gv~r~V~iSS 192 (265)
. .+..+.... .-.+++.++.
T Consensus 107 ~~~~~~~a~~~l~~~G~iv~~G~ 129 (170)
T d1jvba2 107 SEKTLSVYPKALAKQGKYVMVGL 129 (170)
T ss_dssp CHHHHTTGGGGEEEEEEEEECCS
T ss_pred cchHHHhhhhhcccCCEEEEecc
Confidence 2 222222221 1247887764
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.23 E-value=0.013 Score=45.14 Aligned_cols=72 Identities=15% Similarity=0.061 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEee--eCCCC-HHHHHHHH--cCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMA--GDASN-KKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~--~D~~d-~~~l~~~~--~~~d~vi~~ 170 (265)
++.+|+|.|+ |++|...+.++...| .+|+++++++++.+.....+..... .|-.| .+.+.+.. .++|++|-+
T Consensus 28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~ 105 (176)
T d2jhfa2 28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 105 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence 5679999999 779999999999998 5899999998876654332322221 22222 23333333 479999977
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.22 E-value=0.0063 Score=47.28 Aligned_cols=92 Identities=14% Similarity=0.080 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCcc-EEeeeCCCC---HHHHHHHH--cCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDASN---KKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v-~~i~~D~~d---~~~l~~~~--~~~d~vi~~ 170 (265)
++.+|+|.|+ |.+|...++.+...|+ +|+++++++++.+....-+. +++ |..+ .+.+.+.. +++|++|-+
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i--~~~~~~~~~~v~~~t~g~G~D~vid~ 103 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL--NYKNGHIEDQVMKLTNGKGVDRVIMA 103 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEE--CGGGSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccc--cccchhHHHHHHHHhhccCcceEEEc
Confidence 4678999987 9999999999998996 79999998876554322222 222 3322 34455554 358999977
Q ss_pred C--chHHHHHHHhC-CCCEEEEecc
Q 024643 171 S--EGFISNAGSLK-GVQHVILLSQ 192 (265)
Q Consensus 171 ~--~~~~~~aa~~~-gv~r~V~iSS 192 (265)
. +..+..+.+.. .-.+++.++-
T Consensus 104 ~g~~~~~~~a~~~~~~~G~iv~~G~ 128 (174)
T d1jqba2 104 GGGSETLSQAVKMVKPGGIISNINY 128 (174)
T ss_dssp SSCTTHHHHHHHHEEEEEEEEECCC
T ss_pred cCCHHHHHHHHHHHhcCCEEEEEee
Confidence 3 33344443332 2347877764
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.21 E-value=0.012 Score=45.73 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCcc-EEeeeCCC--CHHHHHHHH--cCCCEEEEc-
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAGDAS--NKKFLKTAL--RGVRSIICP- 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v-~~i~~D~~--d~~~l~~~~--~~~d~vi~~- 170 (265)
++.+|+|+|+ |.||...++.+...|. .|++.++++++.+....-+. .++...-. ....+.+.. .++|++|-+
T Consensus 28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~~~~~~~~G~d~vie~~ 106 (174)
T d1e3ia2 28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 106 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCccchhhhhhhHhhhhcCCCcEEEEec
Confidence 5679999987 9999999999999997 67788888877553322222 22221111 223333332 579999977
Q ss_pred -CchHHHHHHHhC--CCCEEEEecc
Q 024643 171 -SEGFISNAGSLK--GVQHVILLSQ 192 (265)
Q Consensus 171 -~~~~~~~aa~~~--gv~r~V~iSS 192 (265)
.+..+..+.+.. +-.+++.++-
T Consensus 107 G~~~~~~~a~~~~~~g~G~~v~vG~ 131 (174)
T d1e3ia2 107 GTAQTLKAAVDCTVLGWGSCTVVGA 131 (174)
T ss_dssp CCHHHHHHHHHTBCTTTCEEEECCC
T ss_pred ccchHHHHHHHHhhcCCeEEEecCC
Confidence 333455554432 3368888874
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=96.20 E-value=0.0085 Score=44.97 Aligned_cols=64 Identities=9% Similarity=0.011 Sum_probs=45.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh----------cCCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~----------~~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
|||.|+|| |.+|+.++..|+..| .++.++++++++++.. .....++... .|. +.++++|.+
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCH----HHhcCCeEE
Confidence 78999997 999999999999998 5899999888654321 1223333322 222 346788888
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+.+
T Consensus 74 vit 76 (142)
T d1guza1 74 IIT 76 (142)
T ss_dssp EEC
T ss_pred EEE
Confidence 876
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=96.19 E-value=0.0048 Score=46.45 Aligned_cols=63 Identities=21% Similarity=0.307 Sum_probs=44.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
|||.|.|+ |.+|..++..|+.++ .++.++++++++++.. ..........|. +.++++|+|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~-------~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY-------ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG-------GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH-------HHhcCCCEEE
Confidence 78999997 999999999999887 5899999887654321 122333333332 3477889888
Q ss_pred Ec
Q 024643 169 CP 170 (265)
Q Consensus 169 ~~ 170 (265)
.+
T Consensus 73 it 74 (140)
T d1a5za1 73 VA 74 (140)
T ss_dssp EC
T ss_pred Ee
Confidence 76
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=96.14 E-value=0.0048 Score=46.85 Aligned_cols=36 Identities=11% Similarity=0.146 Sum_probs=31.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcch
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA 136 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~ 136 (265)
+||.|+|+ |.+|..++..|+.+| .++++++++++++
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~ 39 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKV 39 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence 68999996 999999999999988 4899998887654
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.14 E-value=0.0063 Score=47.21 Aligned_cols=66 Identities=17% Similarity=0.229 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh---cCC--ccEEeeeCCCCHHHHHHHHcCCCEEEEcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES---FGT--YVESMAGDASNKKFLKTALRGVRSIICPS 171 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~---~~~--~v~~i~~D~~d~~~l~~~~~~~d~vi~~~ 171 (265)
.+++|+|.|+ |+.++.++..|.+.+.+|+++.|+.++++.+ +.. .+..+..|-. .+..+|.+|.++
T Consensus 17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~t 87 (171)
T d1p77a1 17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINAT 87 (171)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECC
T ss_pred CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeecc
Confidence 5688999998 8899999999999889999999998776654 121 2333333311 246788898873
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.06 E-value=0.0053 Score=44.90 Aligned_cols=36 Identities=14% Similarity=0.209 Sum_probs=33.0
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
.++++|.|| |++|-+++..|.++|.+|+++.+.+.-
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence 578999999 999999999999999999999998753
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=96.03 E-value=0.0098 Score=45.82 Aligned_cols=41 Identities=10% Similarity=0.128 Sum_probs=34.5
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcch
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNA 136 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~ 136 (265)
...+++||.|+|+ |.+|..++..|+.+|. ++.+++++++++
T Consensus 16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a 58 (160)
T d1i0za1 16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKL 58 (160)
T ss_dssp CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence 3445679999997 9999999999999994 899999887554
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.01 E-value=0.011 Score=45.86 Aligned_cols=96 Identities=10% Similarity=0.069 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccE-Eee-eCCCC-HHHHHHHH--cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVE-SMA-GDASN-KKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~-~i~-~D~~d-~~~l~~~~--~~~d~vi~~ 170 (265)
.++.+|+|+|+ |++|...++.+...| .+|+++++++++.+....-+.+ ++. -|-.+ .+.+.+.. .++|.+|.+
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~ 106 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEV 106 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEe
Confidence 35678999997 999999999999999 5899999999886643222222 221 22222 34444444 579999977
Q ss_pred Cc--hHHHHHHHh--CCCCEEEEeccc
Q 024643 171 SE--GFISNAGSL--KGVQHVILLSQL 193 (265)
Q Consensus 171 ~~--~~~~~aa~~--~gv~r~V~iSS~ 193 (265)
.. .....+... .+-.++|+++..
T Consensus 107 ~g~~~~~~~a~~~~~~~~G~~v~vG~~ 133 (176)
T d1d1ta2 107 IGHLETMIDALASCHMNYGTSVVVGVP 133 (176)
T ss_dssp SCCHHHHHHHHTTSCTTTCEEEECSCC
T ss_pred CCchHHHHHHHHHhhcCCeEEEEEEcc
Confidence 32 233444332 334688888754
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.01 E-value=0.0063 Score=43.89 Aligned_cols=35 Identities=17% Similarity=0.150 Sum_probs=32.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++++|.|| |++|.+++..|.+.|.+|+++.|...
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 368999999 99999999999999999999998775
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.98 E-value=0.011 Score=44.96 Aligned_cols=90 Identities=14% Similarity=0.085 Sum_probs=47.4
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCchH-H
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSEGF-I 175 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~~~-~ 175 (265)
-+|.|.||||++|.+|++.|.++.+ ++..++.+....+......-.....+..+ ..+.++|.++++.+.. .
T Consensus 2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~~~~~~~~~~~~-----~~~~~~d~~f~~~~~~~s 76 (154)
T d2gz1a1 2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTE-----TAFEGVDIALFSAGSSTS 76 (154)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEETTEEEEEEECCT-----TTTTTCSEEEECSCHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccccccCCcccccccch-----hhhhhhhhhhhccCccch
Confidence 3799999999999999999988864 33333322211111110111111222222 2346788888874322 1
Q ss_pred ---HHHHHhCCCCEEEEeccccc
Q 024643 176 ---SNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 176 ---~~aa~~~gv~r~V~iSS~~v 195 (265)
.......+ .++|=.|+..-
T Consensus 77 ~~~~~~~~~~~-~~VIDlSsdfR 98 (154)
T d2gz1a1 77 AKYAPYAVKAG-VVVVDNTSYFR 98 (154)
T ss_dssp HHHHHHHHHTT-CEEEECSSTTT
T ss_pred hhHHhhhcccc-ceehhcChhhh
Confidence 11123344 36777776543
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.97 E-value=0.0069 Score=44.28 Aligned_cols=36 Identities=14% Similarity=0.127 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
..++|+|.|| |++|.+++..|.+.|.+|+++.+.+.
T Consensus 29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence 3578999998 99999999999999999999988764
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.84 E-value=0.011 Score=46.48 Aligned_cols=71 Identities=13% Similarity=-0.064 Sum_probs=53.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCC----------------------CCHHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDA----------------------SNKKF 156 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~----------------------~d~~~ 156 (265)
.-+|+|.|| |-.|..-++.....|.+|.+++.+..+.+++....-.++..+. ...+.
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~ 107 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 107 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHHH
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence 358999999 9999999999999999999999998776665433333332221 22456
Q ss_pred HHHHHcCCCEEEEc
Q 024643 157 LKTALRGVRSIICP 170 (265)
Q Consensus 157 l~~~~~~~d~vi~~ 170 (265)
+.+.+..+|.||.+
T Consensus 108 l~~~l~~aDlVI~t 121 (183)
T d1l7da1 108 VLKELVKTDIAITT 121 (183)
T ss_dssp HHHHHTTCSEEEEC
T ss_pred HHHHHHhhhhheee
Confidence 77788899999976
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.78 E-value=0.012 Score=45.32 Aligned_cols=39 Identities=18% Similarity=0.279 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcch
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNA 136 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~ 136 (265)
..+.||.|+|+ |.+|..++..|+.+| .++.+++++++++
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a 57 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKL 57 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHH
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhh
Confidence 34568999997 999999999999998 4899999887654
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=95.78 E-value=0.026 Score=42.85 Aligned_cols=40 Identities=13% Similarity=0.043 Sum_probs=33.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchh
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM 137 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~ 137 (265)
.+++||.|+|+ |.+|+.++..|...+ .++++++.++++++
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~ 45 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPE 45 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence 45789999998 999999999888888 48988888876543
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.77 E-value=0.0055 Score=46.95 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=32.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCCcchhhh
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDKRNAMES 139 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~~~~~~~ 139 (265)
+++|+|.|. |.+|..+++.|.+.|+ +|++++|+++..+..
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a 42 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKA 42 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH
Confidence 357999987 9999999999999995 678888887655433
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.77 E-value=0.0042 Score=49.26 Aligned_cols=37 Identities=11% Similarity=0.047 Sum_probs=33.7
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA 136 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~ 136 (265)
-++|.|.|| |.+|..++..++..|++|++++++++.+
T Consensus 4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l 40 (192)
T d1f0ya2 4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDIL 40 (192)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence 468999999 9999999999999999999999998543
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=95.74 E-value=0.0092 Score=46.84 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|.|.|. |.||+.+++.+...|.+|++.+|++.... ..-.+++.++++.+|+|+++
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~-------------~~~~~~l~ell~~sDiv~~~ 99 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP-------------WRFTNSLEEALREARAAVCA 99 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS-------------SCCBSCSHHHHTTCSEEEEC
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccccc-------------eeeeechhhhhhccchhhcc
Confidence 45799999999 89999999999999999999988764321 01112467899999999975
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=95.70 E-value=0.011 Score=44.50 Aligned_cols=63 Identities=8% Similarity=0.188 Sum_probs=42.6
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCC--cchh----hh-----cCCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK--RNAM----ES-----FGTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~--~~~~----~~-----~~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
||.|+||+|.+|+.++..|+.++. ++.+++.+. ++++ .+ ......+...|.. .++++|+|
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~-------~~~~aDiV 74 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE-------DTAGSDVV 74 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG-------GGTTCSEE
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH-------HhhhcCEE
Confidence 799999999999999999999983 788877543 2221 11 2233444444432 35788888
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+.+
T Consensus 75 vit 77 (142)
T d1o6za1 75 VIT 77 (142)
T ss_dssp EEC
T ss_pred EEe
Confidence 876
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=95.68 E-value=0.0025 Score=50.02 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=21.9
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVK 122 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~ 122 (265)
+..+|.|+||+|.||+.++-.|+..
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g 47 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASG 47 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcC
Confidence 3448999999999999999999875
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.67 E-value=0.0084 Score=47.78 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=32.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
...++|+|.|| |..|...+..|.++|++|+++.|+.
T Consensus 4 ~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 4 HSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 34578999999 9999999999999999999999864
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=95.63 E-value=0.011 Score=42.85 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=32.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++++|.|| |+||-+++..|.+.|.+|+++.|...
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence 478999999 99999999999999999999998764
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=95.63 E-value=0.023 Score=43.65 Aligned_cols=95 Identities=8% Similarity=0.044 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeE-EEEEeCCcchhhhcCCc-cEEeeeCCCCH-HHHHHHH-cCCCEEEEcC-
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRI-KALVKDKRNAMESFGTY-VESMAGDASNK-KFLKTAL-RGVRSIICPS- 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V-~~~~R~~~~~~~~~~~~-v~~i~~D~~d~-~~l~~~~-~~~d~vi~~~- 171 (265)
.++.+|+|.|+ |.+|...++.+...|+++ ++.++++.+.+....-+ .+++.-+-.|. +.+.+.. .++|.+|-+.
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G 105 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTG 105 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence 35778999998 999999999988888755 55566776654332212 23332222222 2333333 2589999773
Q ss_pred -chHHHHHHHh-CCCCEEEEecc
Q 024643 172 -EGFISNAGSL-KGVQHVILLSQ 192 (265)
Q Consensus 172 -~~~~~~aa~~-~gv~r~V~iSS 192 (265)
...+..+.+. ..-.++++++.
T Consensus 106 ~~~~~~~~~~~~~~~G~i~~~G~ 128 (174)
T d1f8fa2 106 SPEILKQGVDALGILGKIAVVGA 128 (174)
T ss_dssp CHHHHHHHHHTEEEEEEEEECCC
T ss_pred cHHHHHHHHhcccCceEEEEEee
Confidence 3334444332 22348888764
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.61 E-value=0.009 Score=43.60 Aligned_cols=36 Identities=8% Similarity=0.026 Sum_probs=32.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
.++++|.|| |+||.+++..|.+.|.+|+++.|++.-
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 368999999 999999999999999999999987643
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.59 E-value=0.025 Score=43.66 Aligned_cols=96 Identities=13% Similarity=0.012 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccE-EeeeCCCC--HHHHHHHH--cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVE-SMAGDASN--KKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~-~i~~D~~d--~~~l~~~~--~~~d~vi~~ 170 (265)
.++.+|+|.|+ |.+|...++.+...|. +|+++++++++.+....-+.+ ++...-.| .+.+.+.. .++|++|-+
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~~d~~~~~~~~~~~~~G~d~vid~ 104 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVEC 104 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence 35679999997 9999999999999995 788888998876544333333 22111122 23333333 478999977
Q ss_pred C--chHHHHHHHh--CCCCEEEEeccc
Q 024643 171 S--EGFISNAGSL--KGVQHVILLSQL 193 (265)
Q Consensus 171 ~--~~~~~~aa~~--~gv~r~V~iSS~ 193 (265)
. .....++... .+-.++++++-.
T Consensus 105 ~g~~~~~~~~~~~~~~~~G~~v~vG~~ 131 (174)
T d1p0fa2 105 AGRIETMMNALQSTYCGSGVTVVLGLA 131 (174)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECCCC
T ss_pred CCCchHHHHHHHHHHHhcCceEEEEEe
Confidence 3 2334444433 334678887743
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=95.58 E-value=0.0089 Score=43.36 Aligned_cols=35 Identities=9% Similarity=0.031 Sum_probs=32.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++|+|.|| |++|-+++..|...|.+|+++.|...
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 478999999 99999999999999999999998764
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.56 E-value=0.0092 Score=43.58 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=29.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
++++|.|| |+||.+++..|.+.|.+|+++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 57999999 999999999999999999999875
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.55 E-value=0.0074 Score=45.72 Aligned_cols=65 Identities=15% Similarity=0.168 Sum_probs=42.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-C--CeEEEEEeCCcchh----hhcC----CccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-R--TRIKALVKDKRNAM----ESFG----TYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G--~~V~~~~R~~~~~~----~~~~----~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
|||.|+|++|.+|+.++..|..+ + .++.+++..+ .++ .+.+ .....+ ..-.+. +.++++|+||
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~~~~~~----~~~~~aDvvv 74 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SGEDAT----PALEGADVVL 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-CSSCCH----HHHTTCSEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-EcCCCc----cccCCCCEEE
Confidence 78999999999999999887643 4 7888888754 222 1111 111221 122232 3578999999
Q ss_pred Ec
Q 024643 169 CP 170 (265)
Q Consensus 169 ~~ 170 (265)
.+
T Consensus 75 it 76 (145)
T d2cmda1 75 IS 76 (145)
T ss_dssp EC
T ss_pred EC
Confidence 87
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=95.54 E-value=0.014 Score=43.78 Aligned_cols=37 Identities=16% Similarity=0.084 Sum_probs=31.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcch
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA 136 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~ 136 (265)
++||.|+|+ |.+|..++..|+.++ .++.+++.+++++
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~ 38 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVP 38 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence 468999997 999999999998887 5888888877654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.52 E-value=0.0073 Score=44.00 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=31.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++++|.|| |++|-+++..|.+.|++|+++.|++.
T Consensus 32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 368999999 99999999999999999999988653
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.49 E-value=0.042 Score=38.30 Aligned_cols=82 Identities=10% Similarity=0.037 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCcHHH-HHHHHHHHHCCCeEEEEEeCCcc-hhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC---
Q 024643 97 EARDAVLVTDGDSDIG-QMVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS--- 171 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG-~~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~--- 171 (265)
...++|.+.|- |++| +.||+.|.++|++|...++.... ...+...++.+..++-. + .+.+.|.||..+
T Consensus 6 ~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~----~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 6 RRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKIYIGHAE--E----HIEGASVVVVSSAIK 78 (96)
T ss_dssp TTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEEEESCCG--G----GGTTCSEEEECTTSC
T ss_pred hhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeEEECCcc--c----cCCCCCEEEECCCcC
Confidence 34678999887 5566 66899999999999999987543 23334456766655432 2 246788887651
Q ss_pred -chHHHHHHHhCCCC
Q 024643 172 -EGFISNAGSLKGVQ 185 (265)
Q Consensus 172 -~~~~~~aa~~~gv~ 185 (265)
+......|++.|++
T Consensus 79 ~~npel~~A~~~gip 93 (96)
T d1p3da1 79 DDNPELVTSKQKRIP 93 (96)
T ss_dssp TTCHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHcCCC
Confidence 12233345666764
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.45 E-value=0.015 Score=43.40 Aligned_cols=30 Identities=13% Similarity=0.204 Sum_probs=24.8
Q ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEE
Q 024643 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALV 130 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~ 130 (265)
||.|.|++|.+|+.+++.+.+. ++++.+..
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 6899999999999999988775 47776543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=95.43 E-value=0.011 Score=42.52 Aligned_cols=35 Identities=11% Similarity=-0.056 Sum_probs=31.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++++|.|| |++|.+++..|.+.|++|+++.|.+.
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence 368999999 99999999999999999999988764
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=95.41 E-value=0.028 Score=42.61 Aligned_cols=39 Identities=10% Similarity=0.144 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchh
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM 137 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~ 137 (265)
+++||.|.|+ |.+|..++..|..++ .++.++++++++++
T Consensus 2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~ 41 (150)
T d1t2da1 2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPH 41 (150)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcce
Confidence 4679999997 999999998887777 58888888876543
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.38 E-value=0.024 Score=41.78 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=56.0
Q ss_pred CCCEEEEEcCC---cHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-
Q 024643 98 ARDAVLVTDGD---SDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE- 172 (265)
Q Consensus 98 ~~~~vlVtGat---G~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~- 172 (265)
..++|+|.||| +..|..+.+.|.+.| ++|+.+..+.+.. .+ +. ..-++.| +-..+|.++.+.+
T Consensus 7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i---~G--~~-~y~sl~d------lp~~vDlvvi~vp~ 74 (129)
T d2csua1 7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV---QG--VK-AYKSVKD------IPDEIDLAIIVVPK 74 (129)
T ss_dssp SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE---TT--EE-CBSSTTS------CSSCCSEEEECSCH
T ss_pred CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc---CC--eE-eecchhh------cCCCCceEEEecCh
Confidence 45789999998 899999999988766 6888876543221 11 11 1123333 2246898887733
Q ss_pred hH---HHHHHHhCCCCEEEEeccccc
Q 024643 173 GF---ISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 173 ~~---~~~aa~~~gv~r~V~iSS~~v 195 (265)
.. +.+.+.+.|++.++.+|+...
T Consensus 75 ~~~~~~~~~~~~~g~~~~vi~s~Gf~ 100 (129)
T d2csua1 75 RFVKDTLIQCGEKGVKGVVIITAGFG 100 (129)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSST
T ss_pred HHhHHHHHHHHHcCCCEEEEeccccc
Confidence 33 233356788999998887543
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=95.36 E-value=0.0012 Score=50.59 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=22.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR 123 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G 123 (265)
.+||.|+||+|++|+.++..|+..+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~ 28 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGE 28 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcc
Confidence 4699999999999999999999875
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.35 E-value=0.0097 Score=43.52 Aligned_cols=34 Identities=6% Similarity=0.111 Sum_probs=31.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
++++|.|| |+||-+++..|.+.|.+|+++.|+..
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 68999999 99999999999999999999999764
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.32 E-value=0.023 Score=43.76 Aligned_cols=68 Identities=16% Similarity=0.060 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
...+|+++|.|- |.||+.+++.|...|.+|++...++-++-+..-.+.++. .+.+++...|.++.+++
T Consensus 21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~dG~~v~--------~~~~a~~~adivvtaTG 88 (163)
T d1li4a1 21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAMEGYEVT--------TMDEACQEGNIFVTTTG 88 (163)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEEC--------CHHHHTTTCSEEEECSS
T ss_pred eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhcCceEee--------ehhhhhhhccEEEecCC
Confidence 456889999987 999999999999999999999999865443332333332 35677888999998743
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=95.31 E-value=0.0054 Score=47.36 Aligned_cols=41 Identities=10% Similarity=0.192 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhh
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMES 139 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~ 139 (265)
..++|+|.|+ |+.+++++..|.+.|. +|.++.|+.++++.+
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L 57 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYL 57 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHH
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHH
Confidence 3578999999 9999999999999995 899999998876654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=95.31 E-value=0.024 Score=43.28 Aligned_cols=72 Identities=17% Similarity=0.069 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCcc-EEeee-CC-CCHHHHHHHH--cCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYV-ESMAG-DA-SNKKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v-~~i~~-D~-~d~~~l~~~~--~~~d~vi~~ 170 (265)
++.+|+|.|+ |++|...++.+...|. .|++.++++++.+....-+. +++.. +- .+.....+.. .++|++|.+
T Consensus 28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~ 105 (176)
T d2fzwa2 28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFEC 105 (176)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCCchhhHHHHHHHHHcCCCCcEeeec
Confidence 5679999998 6899999999999995 66677777766543322122 22221 11 2223332222 479999977
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.29 E-value=0.0055 Score=48.25 Aligned_cols=38 Identities=13% Similarity=-0.004 Sum_probs=33.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~ 137 (265)
-++|.|.|| |.+|..++..++..|++|++++++++..+
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~ 41 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIE 41 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHh
Confidence 357999999 99999999999999999999999986543
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.28 E-value=0.011 Score=42.50 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=31.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
++++|.|| |++|-+++..|.+.|++|+++.|.+.
T Consensus 22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence 68999999 99999999999999999999988764
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.26 E-value=0.0095 Score=47.25 Aligned_cols=67 Identities=10% Similarity=-0.036 Sum_probs=48.7
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
....++++.|.|. |.||+.+++.|..-|.+|...++......... .+ +...+++.++++.+|+|++.
T Consensus 45 ~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~-------~~~~~~l~~ll~~sD~i~~~ 111 (193)
T d1mx3a1 45 ARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERA-LG-------LQRVSTLQDLLFHSDCVTLH 111 (193)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH-HT-------CEECSSHHHHHHHCSEEEEC
T ss_pred eeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhh-hc-------cccccchhhccccCCEEEEe
Confidence 3456899999998 99999999999999999999988654322111 01 11123566788899998855
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.24 E-value=0.015 Score=41.87 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
+.++++|.|| |++|.+++..|...|.+|+++.|.+.
T Consensus 21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence 4689999999 99999999999999999999998764
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.24 E-value=0.015 Score=43.04 Aligned_cols=37 Identities=24% Similarity=0.275 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
..++|+|.|| |++|-+++..|.+.|.+|+++.+.+.-
T Consensus 34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence 3578999999 999999999999999999999987753
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.23 E-value=0.019 Score=44.81 Aligned_cols=40 Identities=8% Similarity=0.200 Sum_probs=35.1
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
......++|+|.|| |..|.+.+..|.++||+|+++.++..
T Consensus 38 ~~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 38 LPAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CSCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 34455789999999 99999999999999999999998763
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.20 E-value=0.01 Score=47.27 Aligned_cols=63 Identities=13% Similarity=0.001 Sum_probs=47.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..+++|.|.|- |.||+.+++.|..-|.+|++.++......... . ...+++.++++.+|+++++
T Consensus 41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~--~--------~~~~~l~~~l~~sDii~~~ 103 (197)
T d1j4aa1 41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKK--G--------YYVDSLDDLYKQADVISLH 103 (197)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHT--T--------CBCSCHHHHHHHCSEEEEC
T ss_pred ccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccc--e--------eeecccccccccccccccc
Confidence 45789999998 99999999999999999999887654322111 1 1123477788899998865
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.16 E-value=0.02 Score=44.02 Aligned_cols=68 Identities=13% Similarity=0.036 Sum_probs=54.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
...+++++|.|- |.+|+.+++.|...|.+|++...++-++-+..-++.++.. +.++++..|.+|.+++
T Consensus 20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~mdGf~v~~--------~~~a~~~aDi~vTaTG 87 (163)
T d1v8ba1 20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAVMEGFNVVT--------LDEIVDKGDFFITCTG 87 (163)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTTCEECC--------HHHHTTTCSEEEECCS
T ss_pred eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhhHHHHhcCCccCc--------hhHccccCcEEEEcCC
Confidence 456899999998 9999999999999999999999998665544444554432 4578899999998843
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.08 E-value=0.03 Score=42.80 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCc-cEEeeeCCCCHHHHHHHH--cCCCEEEEcCc-
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTY-VESMAGDASNKKFLKTAL--RGVRSIICPSE- 172 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~-v~~i~~D~~d~~~l~~~~--~~~d~vi~~~~- 172 (265)
++.+|+|.|+ |.+|...++.+...|. .|++.++++++.+.....+ .+++.-+-.+.+.+.+.. +++|++|.+.+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~g~d~vid~~g~ 110 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGS 110 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence 4678999987 9999999998888884 6777788877665443222 233332222233344433 36899997733
Q ss_pred -hHHHHHHHh-CCCCEEEEec
Q 024643 173 -GFISNAGSL-KGVQHVILLS 191 (265)
Q Consensus 173 -~~~~~aa~~-~gv~r~V~iS 191 (265)
..+..+... ..-.+++.++
T Consensus 111 ~~~~~~a~~~l~~~G~iv~~G 131 (172)
T d1h2ba2 111 QATVDYTPYLLGRMGRLIIVG 131 (172)
T ss_dssp HHHHHHGGGGEEEEEEEEECC
T ss_pred chHHHHHHHHHhCCCEEEEEe
Confidence 223333222 2225888876
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.02 E-value=0.021 Score=41.33 Aligned_cols=79 Identities=9% Similarity=0.166 Sum_probs=49.8
Q ss_pred CEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcC-chHH
Q 024643 100 DAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPS-EGFI 175 (265)
Q Consensus 100 ~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~-~~~~ 175 (265)
++|.|.|+| +..|..+++.|++.||+|+.+..+.+. ..+ ... ..++.++-+.+|.++.+. +...
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~---i~G--~~~-------y~sl~~lp~~~D~vvi~vp~~~~ 69 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE---IEG--LKC-------YRSVRELPKDVDVIVFVVPPKVG 69 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---ETT--EEC-------BSSGGGSCTTCCEEEECSCHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc---ccC--ccc-------cccchhccccceEEEEEeCHHHH
Confidence 679999988 669999999999999998877543221 111 111 112223334678888773 3322
Q ss_pred ---HHHHHhCCCCEEEEe
Q 024643 176 ---SNAGSLKGVQHVILL 190 (265)
Q Consensus 176 ---~~aa~~~gv~r~V~i 190 (265)
.+.+.+.|++.+++-
T Consensus 70 ~~~l~~~~~~g~k~v~~~ 87 (116)
T d1y81a1 70 LQVAKEAVEAGFKKLWFQ 87 (116)
T ss_dssp HHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHhcCCceEEec
Confidence 223567888877553
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=94.99 E-value=0.012 Score=43.00 Aligned_cols=36 Identities=8% Similarity=-0.056 Sum_probs=32.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
.++++|.|| |+||.+++..|.+.|.+|+++.|++..
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 468999999 999999999999999999999998754
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.81 E-value=0.015 Score=43.70 Aligned_cols=36 Identities=14% Similarity=0.346 Sum_probs=32.5
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
...+++|||+|| |.+|.+-++.|++.|.+|++++..
T Consensus 10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 456899999999 999999999999999999999754
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.81 E-value=0.012 Score=46.71 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=47.0
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|..-|.+|++.++...... ...+. . .++.++++.+|++++.
T Consensus 42 ~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~---~~~~~-----~---~~l~~l~~~~D~v~~~ 104 (199)
T d1dxya1 42 ELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGD---HPDFD-----Y---VSLEDLFKQSDVIDLH 104 (199)
T ss_dssp CGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSC---CTTCE-----E---CCHHHHHHHCSEEEEC
T ss_pred cccceeeeeeec-ccccccccccccccceeeeccCCccchhh---hcchh-----H---HHHHHHHHhcccceee
Confidence 345789999998 99999999999999999999988654321 11111 1 2366778889998865
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=94.69 E-value=0.17 Score=40.70 Aligned_cols=89 Identities=10% Similarity=0.028 Sum_probs=59.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc-------------------chhhh------cCCccEEeee
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAMES------FGTYVESMAG 149 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~-------------------~~~~~------~~~~v~~i~~ 149 (265)
.....+|+|.|+ |++|.+++..|+..|. ++++++.+.- |++.+ ..+.+++...
T Consensus 27 kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~ 105 (247)
T d1jw9b_ 27 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV 105 (247)
T ss_dssp HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhh
Confidence 345679999998 8999999999999995 7788776531 11110 2334555444
Q ss_pred CC-CCHHHHHHHHcCCCEEEEcCch-----HHHHHHHhCCCC
Q 024643 150 DA-SNKKFLKTALRGVRSIICPSEG-----FISNAGSLKGVQ 185 (265)
Q Consensus 150 D~-~d~~~l~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~ 185 (265)
+. .+.+.....+...|.++.+.+. .+..++.+.++.
T Consensus 106 ~~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip 147 (247)
T d1jw9b_ 106 NALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVP 147 (247)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred hhhhhhccccccccccceeeeccchhhhhhhHHHHHHHhCCC
Confidence 43 2455667778899999987432 355566676665
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.66 E-value=0.03 Score=43.82 Aligned_cols=67 Identities=7% Similarity=-0.083 Sum_probs=48.2
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...++++.|.|. |.||+.+++.|..-|.+|...+|............ +....++.++++.+|+|++.
T Consensus 41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~~l~~sD~v~~~ 107 (188)
T d2naca1 41 DLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELN-------LTWHATREDMYPVCDVVTLN 107 (188)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHGGGCSEEEEC
T ss_pred eccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccccccc-------ccccCCHHHHHHhccchhhc
Confidence 346789999998 99999999999999999999998653322111111 11223466788999999865
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.59 E-value=0.024 Score=44.65 Aligned_cols=67 Identities=10% Similarity=-0.021 Sum_probs=48.3
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...++++.|.|. |.||+.+++.+...|.+|...++............ ....+++.++++.+|+|++.
T Consensus 44 ~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-------~~~~~~l~~ll~~sD~v~l~ 110 (191)
T d1gdha1 44 KLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ-------ATFHDSLDSLLSVSQFFSLN 110 (191)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT-------CEECSSHHHHHHHCSEEEEC
T ss_pred eecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc-------ccccCCHHHHHhhCCeEEec
Confidence 446789999998 99999999999999999999887654322111111 11123467888999999855
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=94.56 E-value=0.044 Score=41.10 Aligned_cols=64 Identities=13% Similarity=0.127 Sum_probs=44.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh---------cCCccEEeeeCCCCHHHHHHHHcCCCEEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES---------FGTYVESMAGDASNKKFLKTALRGVRSII 168 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~---------~~~~v~~i~~D~~d~~~l~~~~~~~d~vi 168 (265)
.||.|+|+ |.+|..++..|+.+| .++.++++++++++.. +.....+...+ |. +.++++|+|+
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEE
Confidence 47999997 999999999999998 4899999887654321 11222332221 22 2467888888
Q ss_pred Ec
Q 024643 169 CP 170 (265)
Q Consensus 169 ~~ 170 (265)
.+
T Consensus 75 it 76 (143)
T d1llda1 75 IT 76 (143)
T ss_dssp EC
T ss_pred Ee
Confidence 76
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.53 E-value=0.017 Score=45.21 Aligned_cols=64 Identities=19% Similarity=-0.003 Sum_probs=47.2
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
..++++.|.|. |.||+.+++.+..-|.+|++.++......... ..++. .++.++++.+|+|+++
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~-~~~~~--------~~l~ell~~sDiv~~~ 105 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ-LGIEL--------LSLDDLLARADFISVH 105 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH-HTCEE--------CCHHHHHHHCSEEEEC
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhh-cCcee--------ccHHHHHhhCCEEEEc
Confidence 45789999997 99999999999999999999988765432211 11221 2356788999999865
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.52 E-value=0.019 Score=44.13 Aligned_cols=35 Identities=9% Similarity=-0.043 Sum_probs=31.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~ 134 (265)
++||+|.|| |..|...|..|.++|+ +|+++.|+..
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 578999999 9999999999999998 5999998763
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.50 E-value=0.029 Score=42.11 Aligned_cols=40 Identities=5% Similarity=0.001 Sum_probs=32.0
Q ss_pred CCCCCEEEEE-cCCcHHHHHHHHHHHHCCCeEEEEEeCCcc
Q 024643 96 EEARDAVLVT-DGDSDIGQMVILSLIVKRTRIKALVKDKRN 135 (265)
Q Consensus 96 ~~~~~~vlVt-GatG~IG~~l~~~Ll~~G~~V~~~~R~~~~ 135 (265)
..+++.++|. .+.|+||.+++..|.++|++|+++.+...-
T Consensus 36 ~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 36 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA 76 (156)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 4456666665 244999999999999999999999997643
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.47 E-value=0.048 Score=42.83 Aligned_cols=71 Identities=10% Similarity=-0.014 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCcchhhhcCCccEEeeeCCCC--H-HHHHHHHc--CCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKRNAMESFGTYVESMAGDASN--K-KFLKTALR--GVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~~~~~~~~~~v~~i~~D~~d--~-~~l~~~~~--~~d~vi~~ 170 (265)
++.+|+|.|+ |.+|...+..+...|. +|+++++++++.+....-+.+.+. |..+ . +.+.+... ++|.+|-+
T Consensus 25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~-~~~~~~~~~~i~~~t~g~g~D~vid~ 101 (195)
T d1kola2 25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD-LSLDTPLHEQIAALLGEPEVDCAVDA 101 (195)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEE-TTSSSCHHHHHHHHHSSSCEEEEEEC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEE-eCCCcCHHHHHHHHhCCCCcEEEEEC
Confidence 5679999987 9999888888877785 888889988776654433444433 3322 2 34444443 58998866
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=94.46 E-value=0.023 Score=41.56 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=32.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++++|.|| |+||.+++..|.+.|.+|+++.+.+.
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 468999999 99999999999999999999988764
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.45 E-value=0.024 Score=45.43 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
..+||+|.|| |..|..++..|.++|++|+++.|+.+
T Consensus 3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3578999999 99999999999999999999988653
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.45 E-value=0.016 Score=44.87 Aligned_cols=41 Identities=10% Similarity=0.091 Sum_probs=34.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
..+++|+|.|+ |+.++.++..|.+.| +|.++.|+.++++.+
T Consensus 16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l 56 (177)
T d1nvta1 16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEAL 56 (177)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHH
Confidence 45789999999 889999999997766 999999998876654
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.41 E-value=0.028 Score=37.81 Aligned_cols=52 Identities=12% Similarity=0.037 Sum_probs=38.5
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASN 153 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d 153 (265)
.|+|.|.|+ |.+|+.++..-..-|++|++++-+.+..... ...+++..++.+
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~pa~~--~a~dvIT~e~E~ 52 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPAAVP--FQQSVITAEIER 52 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGGGSC--GGGSEEEESSSC
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCcccc--cccceEEEeecc
Confidence 368999999 9999999999999999999999776543222 223455555543
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.41 E-value=0.02 Score=45.73 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=31.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
+|+|+|+|| |.-|...+.+|.++|++|+++.++.
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 478999999 9999999999999999999998754
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.10 E-value=0.025 Score=44.29 Aligned_cols=63 Identities=8% Similarity=-0.018 Sum_probs=46.8
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
...+++|.|.|. |.||+.+++.|..-|.+|...++...... .... .+ +++.++++.+|+++++
T Consensus 41 ~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~----~~---~~l~ell~~sDii~i~ 103 (188)
T d1sc6a1 41 EARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPL----GNAT----QV---QHLSDLLNMSDVVSLH 103 (188)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCC----TTCE----EC---SCHHHHHHHCSEEEEC
T ss_pred cccceEEEEeec-ccchhhhhhhcccccceEeeccccccchh----hhhh----hh---hhHHHHHhhccceeec
Confidence 346789999987 99999999999999999999987654321 1111 11 2466788889999865
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=94.03 E-value=0.021 Score=45.62 Aligned_cols=33 Identities=24% Similarity=0.120 Sum_probs=30.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|+|.|| |.-|...+..|.++|++|+++-++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 68999999 9999999999999999999998764
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.99 E-value=0.044 Score=43.78 Aligned_cols=39 Identities=13% Similarity=0.195 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 95 PEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 95 ~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.....++|+|.|| |..|...+..|.++|++|+++.++..
T Consensus 45 ~~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 45 QTKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CCSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 3456789999999 99999999999999999999987653
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.88 E-value=0.031 Score=41.84 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=29.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT--RIKALVKDK 133 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~--~V~~~~R~~ 133 (265)
+++|+|.|| |++|-+++..|.+.++ +|+++.+++
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 689999999 9999999999999884 788887665
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.86 E-value=0.024 Score=44.30 Aligned_cols=38 Identities=8% Similarity=-0.004 Sum_probs=32.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
|+|.|.|. |++|..++..| ++|++|++++-++++.+.+
T Consensus 1 MkI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v~~l 38 (196)
T d1dlja2 1 MKIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKVDKI 38 (196)
T ss_dssp CEEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred CEEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence 78999975 99999998755 5799999999998776655
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=93.78 E-value=0.11 Score=39.29 Aligned_cols=94 Identities=17% Similarity=0.097 Sum_probs=55.5
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchhhhcCCcc-EEeee-CCCC-HHHHHHHH--cCCCEEEEc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAMESFGTYV-ESMAG-DASN-KKFLKTAL--RGVRSIICP 170 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~~~~~~~v-~~i~~-D~~d-~~~l~~~~--~~~d~vi~~ 170 (265)
.++.+|+|+|+ |.+|...+..+...| .+|+++++++++.+....-+. +++.- +-.+ .+.+.+.. .++|+++-+
T Consensus 27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~~~~~~~~~~~~~~~~~G~d~vid~ 105 (175)
T d1cdoa2 27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 105 (175)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCCCcchhHHHHHHhhccCCcceeeee
Confidence 35678999997 668888888888877 578889998887765433333 22221 1111 23344433 479999977
Q ss_pred Cc--hHHHHHHHh--CCCCEEEEec
Q 024643 171 SE--GFISNAGSL--KGVQHVILLS 191 (265)
Q Consensus 171 ~~--~~~~~aa~~--~gv~r~V~iS 191 (265)
.+ .....+... .+-..+++..
T Consensus 106 ~G~~~~~~~a~~~~~~g~~~~~~~g 130 (175)
T d1cdoa2 106 VGNVGVMRNALESCLKGWGVSVLVG 130 (175)
T ss_dssp SCCHHHHHHHHHTBCTTTCEEEECS
T ss_pred cCCHHHHHHHHHHhhCCCcceeEEE
Confidence 32 333444332 3334455444
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.76 E-value=0.039 Score=46.48 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=32.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.++|+|.|| |.-|...|..|.++|++|.++-++..
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 578999999 99999999999999999999988763
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.74 E-value=0.036 Score=45.21 Aligned_cols=37 Identities=11% Similarity=0.114 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
....++|+|+|| |-.|...+..|.++|++|+++.++.
T Consensus 27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 334578999999 9999999999999999999998765
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=93.59 E-value=0.026 Score=42.31 Aligned_cols=64 Identities=13% Similarity=0.226 Sum_probs=44.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCcchhhh----------cCCccEEeeeCCCCHHHHHHHHcCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTALRGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~~~~~~----------~~~~v~~i~~D~~d~~~l~~~~~~~d~v 167 (265)
|||.|+|+ |.+|..++..|+.+| .++.++++++++++.. .+....+... .|. +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~----~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCH----HHhccccEE
Confidence 78999997 999999999999888 5799999887654321 1222233322 122 257788888
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+.+
T Consensus 74 vit 76 (142)
T d1ojua1 74 VVT 76 (142)
T ss_dssp EEC
T ss_pred EEe
Confidence 876
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.55 E-value=0.17 Score=38.80 Aligned_cols=94 Identities=18% Similarity=0.117 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeC-Ccc-hhhhcCCccEEeeeCCCC-----------HHHHHHHHcC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKD-KRN-AMESFGTYVESMAGDASN-----------KKFLKTALRG 163 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~-~~~-~~~~~~~~v~~i~~D~~d-----------~~~l~~~~~~ 163 (265)
+.++|.|-|- |.||+.+++.+..+. .+|+++... +.. ...+...+...+..+... ...+..+.++
T Consensus 1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (172)
T d2czca2 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (172)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence 3568999997 999999999998865 777776642 211 111211122222222211 1134455679
Q ss_pred CCEEEEcCchHHHH----HHHhCCCCEEEEeccc
Q 024643 164 VRSIICPSEGFISN----AGSLKGVQHVILLSQL 193 (265)
Q Consensus 164 ~d~vi~~~~~~~~~----aa~~~gv~r~V~iSS~ 193 (265)
+|+|+-|++.+... .-.++|++ .|++|+.
T Consensus 80 vDvViEcTG~f~~~~~~~~hl~~G~k-~Vi~s~~ 112 (172)
T d2czca2 80 VDIIVDATPGGIGAKNKPLYEKAGVK-AIFQGGE 112 (172)
T ss_dssp CSEEEECCSTTHHHHHHHHHHHHTCE-EEECTTS
T ss_pred CCEEEECCCCCCCHHHHHHHHHcCCC-EEEECCC
Confidence 99999887665321 12356764 5556653
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=93.55 E-value=0.043 Score=42.74 Aligned_cols=92 Identities=10% Similarity=0.039 Sum_probs=51.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcchh--hhcCCccEEee----------eCCCCHHHHHHHHcCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNAM--ESFGTYVESMA----------GDASNKKFLKTALRGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~~--~~~~~~v~~i~----------~D~~d~~~l~~~~~~~d~ 166 (265)
-||.|-| .|.||+.+++.+.+++ .+|+++........ .+......... ..+.....+...++++|+
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDi 80 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDI 80 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSE
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCE
Confidence 4789998 5999999999999875 78888765332111 11100000000 011111124455678999
Q ss_pred EEEcCchHHH----HHHHhCCCCEEEEeccc
Q 024643 167 IICPSEGFIS----NAGSLKGVQHVILLSQL 193 (265)
Q Consensus 167 vi~~~~~~~~----~aa~~~gv~r~V~iSS~ 193 (265)
|+-|++.+.. ....++| +++|+.++.
T Consensus 81 ViecTG~f~~~e~a~~hl~~G-~KvIi~~~~ 110 (178)
T d1b7go1 81 VVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGE 110 (178)
T ss_dssp EEECCSTTHHHHHHHHHHHTT-CEEEECTTS
T ss_pred EEECCCCcCCHHHHHHHHHcC-CEEEEECCC
Confidence 9988665422 1123466 577775543
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=93.48 E-value=0.042 Score=43.66 Aligned_cols=42 Identities=12% Similarity=0.028 Sum_probs=35.9
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES 139 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~ 139 (265)
..+++|+|-|- |.+|+++++.|.+.|.+|++.+.+..+....
T Consensus 25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~ 66 (201)
T d1c1da1 25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHA 66 (201)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHH
Confidence 45789999986 9999999999999999999988877665444
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=93.26 E-value=0.098 Score=38.06 Aligned_cols=91 Identities=3% Similarity=-0.037 Sum_probs=55.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH-cCCCEEEEcCch---
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV-KRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL-RGVRSIICPSEG--- 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~-~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~-~~~d~vi~~~~~--- 173 (265)
+.+|+|.|| |.+|+.+++.+.. .+++++++.-+........-.++.++. ..+ +.+.. +.++.++.+.+.
T Consensus 3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I~Gi~V~~--~~~---l~~~~~~~i~iai~~i~~~~~ 76 (126)
T d2dt5a2 3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPVRGGVIEH--VDL---LPQRVPGRIEIALLTVPREAA 76 (126)
T ss_dssp CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEETTEEEEE--GGG---HHHHSTTTCCEEEECSCHHHH
T ss_pred CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEECCEEEec--HHH---HHHHHhhcccEEEEeCCHHHH
Confidence 347999999 9999999987753 468988876654332111112455543 223 44444 345665655332
Q ss_pred -HHHHHHHhCCCCEEEEeccccc
Q 024643 174 -FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 174 -~~~~aa~~~gv~r~V~iSS~~v 195 (265)
-+.+.+.+.|++.+..++....
T Consensus 77 ~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 77 QKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp HHHHHHHHHHTCCEEEECSSSCC
T ss_pred HHHHHHHHHcCCCEEeecCceee
Confidence 2445567789998887765544
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=93.25 E-value=0.036 Score=44.80 Aligned_cols=31 Identities=16% Similarity=0.218 Sum_probs=29.5
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|.|| |.+|..++.+|+++|++|+++.++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 999999 9999999999999999999999865
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.12 E-value=0.059 Score=40.16 Aligned_cols=83 Identities=7% Similarity=0.045 Sum_probs=51.9
Q ss_pred CCCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc-Cch
Q 024643 98 ARDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEG 173 (265)
Q Consensus 98 ~~~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~ 173 (265)
..++|+|.||| +..|..+++.|.+.||+|+.+...... ..+ ... +.+ +.++-..+|.++.+ .+.
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~---i~G--~~~----~~s---l~dlp~~iD~v~i~vp~~ 85 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE---VLG--RKC----YPS---VLDIPDKIEVVDLFVKPK 85 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE---ETT--EEC----BSS---GGGCSSCCSEEEECSCHH
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc---cCC--Ccc----ccc---ccccCccceEEEEEeCHH
Confidence 35789999998 689999999999999998877543321 111 111 111 22333467888876 333
Q ss_pred HH---HHHHHhCCCCEEEEecc
Q 024643 174 FI---SNAGSLKGVQHVILLSQ 192 (265)
Q Consensus 174 ~~---~~aa~~~gv~r~V~iSS 192 (265)
.. .+.+.+.|++.+++...
T Consensus 86 ~~~~~~~e~~~~g~k~v~~~~G 107 (139)
T d2d59a1 86 LTMEYVEQAIKKGAKVVWFQYN 107 (139)
T ss_dssp HHHHHHHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHHHhCCCEEEEecc
Confidence 32 22345678887766443
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.98 E-value=0.18 Score=38.81 Aligned_cols=77 Identities=8% Similarity=-0.042 Sum_probs=51.9
Q ss_pred CCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhh----hcCCccEEeeeCCCCHHHHHHHHcCCCEEEE
Q 024643 94 FPEEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAME----SFGTYVESMAGDASNKKFLKTALRGVRSIIC 169 (265)
Q Consensus 94 ~~~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~----~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~ 169 (265)
..+..+++++|.|.+.-+|+.++..|+++|..|+....+...... ..-.............+.+++....+|++|.
T Consensus 24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIs 103 (171)
T d1edza1 24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 103 (171)
T ss_dssp TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEE
Confidence 346678999999999999999999999999999866543211100 0000011111112356778899999999997
Q ss_pred c
Q 024643 170 P 170 (265)
Q Consensus 170 ~ 170 (265)
+
T Consensus 104 a 104 (171)
T d1edza1 104 G 104 (171)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=92.96 E-value=0.014 Score=44.94 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEE
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVK-RTRIKALV 130 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~ 130 (265)
..++|+|.|++|.+|+.+++.+.+. ++++++..
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~ 36 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL 36 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 3578999999999999999999886 56776544
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.92 E-value=0.074 Score=42.72 Aligned_cols=35 Identities=11% Similarity=0.054 Sum_probs=31.0
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
+..+|+|.|| |.-|...+..|.++|++|+++-++.
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4567999999 9999999999999999999986544
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=92.88 E-value=0.009 Score=44.87 Aligned_cols=71 Identities=10% Similarity=0.022 Sum_probs=39.6
Q ss_pred EEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc-CchHHHHHHHh
Q 024643 103 LVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISNAGSL 181 (265)
Q Consensus 103 lVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~~~~~aa~~ 181 (265)
-+.|+ |.+|+++++.|.+.++.+.+.+|+.++++.+...... ...+ ..++++.+|+||++ .+..+.+.+.+
T Consensus 3 gfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~-~~~~------~~~~~~~~DiVil~v~d~~i~~v~~~ 74 (153)
T d2i76a2 3 NFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGG-KAAT------LEKHPELNGVVFVIVPDRYIKTVANH 74 (153)
T ss_dssp EEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCC-CCCS------SCCCCC---CEEECSCTTTHHHHHTT
T ss_pred EEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccc-cccc------hhhhhccCcEEEEeccchhhhHHHhh
Confidence 45666 9999999998866444446889998887665321111 1112 22456778999977 44445555443
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.86 E-value=0.066 Score=40.41 Aligned_cols=35 Identities=17% Similarity=0.096 Sum_probs=30.1
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
..++|+|.|| |.+|-+++..|.+.|.+|.++.+..
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence 3578999999 9999999999999998887776654
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.34 E-value=0.069 Score=47.20 Aligned_cols=73 Identities=18% Similarity=0.141 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCCc-------------------chhh----h--cCC--ccEEee
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDKR-------------------NAME----S--FGT--YVESMA 148 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~~-------------------~~~~----~--~~~--~v~~i~ 148 (265)
....+|+|.|+ |++|.++++.|+..|. ++++++.+.- |++. + ..+ .++.+.
T Consensus 35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~ 113 (426)
T d1yovb1 35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF 113 (426)
T ss_dssp HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence 45678999999 7899999999999995 8888887541 1110 0 122 345555
Q ss_pred eCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 149 GDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 149 ~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
.++.+.. ...++++|.|+.+.+
T Consensus 114 ~~i~~~~--~~~~~~~DlVi~~~D 135 (426)
T d1yovb1 114 NKIQDFN--DTFYRQFHIIVCGLD 135 (426)
T ss_dssp SCGGGBC--HHHHTTCSEEEECCS
T ss_pred ccccchH--HHHHHhcchheeccC
Confidence 5554432 357899999998844
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=92.32 E-value=0.12 Score=39.96 Aligned_cols=97 Identities=8% Similarity=0.040 Sum_probs=56.5
Q ss_pred CCCEEEE-EcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh----cCCccE-Eee---eCCCCH-HHHHHHH----cC
Q 024643 98 ARDAVLV-TDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES----FGTYVE-SMA---GDASNK-KFLKTAL----RG 163 (265)
Q Consensus 98 ~~~~vlV-tGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~----~~~~v~-~i~---~D~~d~-~~l~~~~----~~ 163 (265)
++.+++| +||+|.+|...++.....|.+|++++|+.++.++. ...+.. ++. .|..+. +.+.+.. .+
T Consensus 28 ~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~~~~~~~v~~~~~~~g~~ 107 (189)
T d1gu7a2 28 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGE 107 (189)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred CCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccchhHHHHHHHHHHhhccCC
Confidence 3455666 69999999999999888999999999887553321 111222 222 122221 1233322 46
Q ss_pred CCEEEEc-CchHHHHHHHh-CCCCEEEEecccc
Q 024643 164 VRSIICP-SEGFISNAGSL-KGVQHVILLSQLS 194 (265)
Q Consensus 164 ~d~vi~~-~~~~~~~aa~~-~gv~r~V~iSS~~ 194 (265)
+|++|-+ .+......... ..-.++|.++..+
T Consensus 108 vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~ 140 (189)
T d1gu7a2 108 AKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS 140 (189)
T ss_dssp EEEEEESSCHHHHHHHHHTSCTTCEEEECCCCS
T ss_pred ceEEEECCCcchhhhhhhhhcCCcEEEEECCcc
Confidence 8888876 33333333332 2335888877543
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=92.19 E-value=0.56 Score=35.03 Aligned_cols=71 Identities=20% Similarity=0.193 Sum_probs=43.9
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCCc--chhhh---cCCccEEeeeCCCCHHHHHHHHcCCCEEEEc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDKR--NAMES---FGTYVESMAGDASNKKFLKTALRGVRSIICP 170 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~~--~~~~~---~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~ 170 (265)
.++|.|.|+||.||....+-+.+. .++|.+++-+.. ++.+. +.+..- +..|-...+.+...+.+.+..+..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v-~i~d~~~~~~l~~~~~~~~~~v~~ 79 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRA-VIADPSLYNDLKEALAGSSVEAAA 79 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEE-EESCGGGHHHHHHHTTTCSSEEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccc-eeccHHHHHHHHHHhhhccccccc
Confidence 378999999999999999888775 488988875542 22211 333322 233444445555555555544443
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.18 E-value=0.22 Score=33.95 Aligned_cols=79 Identities=8% Similarity=-0.049 Sum_probs=51.3
Q ss_pred CEEEEEcCCcHHHH-HHHHHHHHCCCeEEEEEeCCcc-hhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc----Cch
Q 024643 100 DAVLVTDGDSDIGQ-MVILSLIVKRTRIKALVKDKRN-AMESFGTYVESMAGDASNKKFLKTALRGVRSIICP----SEG 173 (265)
Q Consensus 100 ~~vlVtGatG~IG~-~l~~~Ll~~G~~V~~~~R~~~~-~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~----~~~ 173 (265)
|+|-++|- |++|- .||+.|.++|++|...++.... ...+...++++..+. +++. ++++|.||.. .+.
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~~gh--~~~~----i~~~d~vV~SsAI~~~n 74 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIFVPH--SADN----WYDPDLVIKTPAVRDDN 74 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEESSC--CTTS----CCCCSEEEECTTCCTTC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEEeee--cccc----cCCCCEEEEecCcCCCC
Confidence 78888887 55665 6899999999999999987643 333444566665442 2111 3678888876 122
Q ss_pred HHHHHHHhCCCC
Q 024643 174 FISNAGSLKGVQ 185 (265)
Q Consensus 174 ~~~~aa~~~gv~ 185 (265)
....++++.|++
T Consensus 75 pel~~A~~~gIp 86 (89)
T d1j6ua1 75 PEIVRARMERVP 86 (89)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHcCCC
Confidence 334456777764
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.16 E-value=0.079 Score=40.90 Aligned_cols=33 Identities=21% Similarity=0.153 Sum_probs=28.9
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~ 133 (265)
|||+|.|| |++|.+++..|.+.+ .+|+++.|+.
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 78999999 999999999998864 6888888764
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=92.09 E-value=0.22 Score=38.05 Aligned_cols=67 Identities=9% Similarity=0.041 Sum_probs=44.5
Q ss_pred CCCEEEEEcCCcHHHHH--HHHHHHHC----CCeEEEEEeCCcchhhh----------cCCccEEeeeCCCCHHHHHHHH
Q 024643 98 ARDAVLVTDGDSDIGQM--VILSLIVK----RTRIKALVKDKRNAMES----------FGTYVESMAGDASNKKFLKTAL 161 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~--l~~~Ll~~----G~~V~~~~R~~~~~~~~----------~~~~v~~i~~D~~d~~~l~~~~ 161 (265)
+.|||.|.|| |.+|.. ++..|+.. +.++++++.++++++.. .+...++... +| ..+++
T Consensus 1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~--td---~~eaL 74 (171)
T d1obba1 1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT--MN---LDDVI 74 (171)
T ss_dssp CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE--SC---HHHHH
T ss_pred CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe--CC---hhhcc
Confidence 4789999998 888864 34444432 46999999998765431 2223333322 24 45688
Q ss_pred cCCCEEEEc
Q 024643 162 RGVRSIICP 170 (265)
Q Consensus 162 ~~~d~vi~~ 170 (265)
+++|.|+..
T Consensus 75 ~dad~Vv~~ 83 (171)
T d1obba1 75 IDADFVINT 83 (171)
T ss_dssp TTCSEEEEC
T ss_pred cCCCeEeee
Confidence 999999987
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.96 E-value=0.071 Score=40.95 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=29.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|.|| |..|...|..|+++|++|.++.++.
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 899998 9999999999999999999998875
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=91.55 E-value=0.015 Score=46.01 Aligned_cols=26 Identities=19% Similarity=0.202 Sum_probs=24.0
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRI 126 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V 126 (265)
|+|+|.|| |-+|...|.+|+++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 78999999 999999999999999754
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=91.46 E-value=0.064 Score=43.70 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=31.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
.+|+|.|| |-.|..++..|.+.|++|.++.|++.
T Consensus 3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46999999 89999999999999999999988763
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.38 E-value=0.092 Score=40.41 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=29.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~ 133 (265)
++|+|.|| |.-|...+..|.++|+ +|+++-++.
T Consensus 1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 36999999 9999999999999995 699998764
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=91.30 E-value=0.086 Score=42.66 Aligned_cols=31 Identities=13% Similarity=0.105 Sum_probs=29.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|.|| |..|..++.+|+++|++|+++.+..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899999 9999999999999999999998864
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=91.22 E-value=0.15 Score=36.25 Aligned_cols=35 Identities=14% Similarity=0.064 Sum_probs=28.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~~~R~~~ 134 (265)
.++++|.|| |++|-+++..|.+ +|.+|+++.|.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 468999999 9999999966554 4578999988664
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=91.02 E-value=0.094 Score=42.96 Aligned_cols=32 Identities=13% Similarity=0.216 Sum_probs=29.1
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~ 133 (265)
.|+|.|| |-+|..++.+|+++|. +|+++.|+.
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 6999999 9999999999999995 699998874
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=90.77 E-value=0.14 Score=38.84 Aligned_cols=33 Identities=9% Similarity=0.111 Sum_probs=26.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK-RTRIKALVKD 132 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~ 132 (265)
+++|.|.|. |.+|+.+++.|.+. +.+++++...
T Consensus 3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~ 36 (170)
T d1f06a1 3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSR 36 (170)
T ss_dssp CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEES
T ss_pred cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEec
Confidence 468999996 99999999999875 5777765543
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=90.70 E-value=0.13 Score=38.77 Aligned_cols=35 Identities=20% Similarity=0.214 Sum_probs=29.1
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK 133 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~ 133 (265)
+++|.|.|+||.||.....-+.+. .++|.+++-+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 467999999999999999988776 47888887544
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=90.69 E-value=0.21 Score=35.33 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=29.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH---CCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV---KRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~---~G~~V~~~~R~~~ 134 (265)
.++++|.|| |++|-+++..|.+ .|.+|+++.|.+.
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence 368999999 9999999976654 4889999998764
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.61 E-value=0.12 Score=38.32 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=27.0
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
||+|.|| |++|-+++..|. ++.+|+++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999999 999999999885 578999998754
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.48 E-value=0.14 Score=40.79 Aligned_cols=93 Identities=12% Similarity=0.202 Sum_probs=59.3
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCC---eEEEEEeCCcchhhhcCCccEEeeeCC-------------------CCH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRT---RIKALVKDKRNAMESFGTYVESMAGDA-------------------SNK 154 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~---~V~~~~R~~~~~~~~~~~~v~~i~~D~-------------------~d~ 154 (265)
..+.+|.|.|- |+-|..++.+|.+.|. +.+++.-+.+.+.... ...++..+.- .+.
T Consensus 13 ~~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~-~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~ 90 (209)
T d2vapa1 13 QTKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTK-ADKKILIGKKLTRGLGAGGNPKIGEEAAKESA 90 (209)
T ss_dssp TTCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSC-CSEEEECCTTTTTTBCCTTCHHHHHHHHHHTH
T ss_pred ccCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCC-cchhcccccccccccccccchHHHHHHHHHHH
Confidence 34578999998 8899999999999873 4556665554443221 1122222211 234
Q ss_pred HHHHHHHcCCCEEEEc---C-------chHHHHHHHhCCCCEEEEec
Q 024643 155 KFLKTALRGVRSIICP---S-------EGFISNAGSLKGVQHVILLS 191 (265)
Q Consensus 155 ~~l~~~~~~~d~vi~~---~-------~~~~~~aa~~~gv~r~V~iS 191 (265)
+.+.+.++++|.+|.+ . ...+...+++.+..-+-++.
T Consensus 91 ~~I~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g~lvv~ivt 137 (209)
T d2vapa1 91 EEIKAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIGALTVAVVT 137 (209)
T ss_dssp HHHHHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcCCcEEEEEe
Confidence 6788889999999866 1 13467778888865444444
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=90.45 E-value=0.075 Score=40.43 Aligned_cols=32 Identities=13% Similarity=-0.026 Sum_probs=26.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK 131 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R 131 (265)
+.+|+|.|| |++|-+++..|.+.|+++.++.+
T Consensus 3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence 456999998 99999999999999977665554
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=90.39 E-value=1.2 Score=31.74 Aligned_cols=87 Identities=10% Similarity=0.137 Sum_probs=54.3
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEE-EcCchHHHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSII-CPSEGFISN 177 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi-~~~~~~~~~ 177 (265)
..+|+|-|-||..|+.-++++++-|-+|++-+...+.-.... ++-+ .|. =.+.+++ .++|+-+ +..+.+..+
T Consensus 6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~~--giPV--f~s-V~eAv~~--~~~~~SvIfVPp~~a~d 78 (119)
T d2nu7a1 6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHL--GLPV--FNT-VREAVAA--TGATASVIYVPAPFCKD 78 (119)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEET--TEEE--ESS-HHHHHHH--HCCCEEEECCCGGGHHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCcccC--CCch--hhH-HHHHHHH--hCCCeEEEeccHHHHHH
Confidence 468999999999999999999999999988665433222111 1111 111 1223332 2566544 445555555
Q ss_pred H---HHhCCCCEEEEecc
Q 024643 178 A---GSLKGVQHVILLSQ 192 (265)
Q Consensus 178 a---a~~~gv~r~V~iSS 192 (265)
+ +.++|++.+|.++-
T Consensus 79 A~~EAi~agI~~iV~ITE 96 (119)
T d2nu7a1 79 SILEAIDAGIKLIITITE 96 (119)
T ss_dssp HHHHHHHTTCSEEEECCC
T ss_pred HHHHHHHCCCCEEEEecC
Confidence 5 34689998887763
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.25 E-value=0.19 Score=39.84 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=30.5
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR 134 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~ 134 (265)
++|+|.|| |..|..++..|.+.| ++|+++-|++.
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 68999999 999999999999999 58999988764
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=90.22 E-value=0.16 Score=42.42 Aligned_cols=36 Identities=6% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC--CeEEEEEeCCc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR--TRIKALVKDKR 134 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G--~~V~~~~R~~~ 134 (265)
..++|+|+|| |.-|...+..|+++| ++|+++-|+..
T Consensus 3 ~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 3 TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 4678999999 999999999999877 69999988753
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=90.04 E-value=0.5 Score=36.87 Aligned_cols=90 Identities=14% Similarity=0.155 Sum_probs=57.6
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhhcCCccEEeeeC-C------------------CCHHHH
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGTYVESMAGD-A------------------SNKKFL 157 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~v~~i~~D-~------------------~d~~~l 157 (265)
++|.|.|- |+-|..++.+|.+.| .+.+++.-|.+.+.... ...++..+. . .+.+.+
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~-a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I 78 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASN-ADVKIQIGENITRGLGAGGRPEIGEQAALESEEKI 78 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCC-CSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHH
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCC-cceEEecccccCCCcccccCchhhHhHHHHHHHHH
Confidence 47889998 889999999999876 45566666654443221 122222221 1 245677
Q ss_pred HHHHcCCCEEEEc---C-------chHHHHHHHhCCCCEEEEec
Q 024643 158 KTALRGVRSIICP---S-------EGFISNAGSLKGVQHVILLS 191 (265)
Q Consensus 158 ~~~~~~~d~vi~~---~-------~~~~~~aa~~~gv~r~V~iS 191 (265)
.+.++++|.||.+ . ...+...+++.++--+-+++
T Consensus 79 ~~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g~lvv~ivt 122 (194)
T d1w5fa1 79 REVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVT 122 (194)
T ss_dssp HHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcCCceEEEEe
Confidence 8888999999966 1 13567778888865444433
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=89.94 E-value=0.75 Score=33.36 Aligned_cols=73 Identities=7% Similarity=0.055 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC----------CcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--cCC
Q 024643 97 EARDAVLVTDG----------DSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGV 164 (265)
Q Consensus 97 ~~~~~vlVtGa----------tG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--~~~ 164 (265)
...++|+|.|+ -.+.+.+.++.|.+.|++++++..+++....-+. -..-+...--..+.+.+.+ +..
T Consensus 5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~aD~lYfePlt~e~v~~Ii~~E~p 83 (127)
T d1a9xa3 5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-MADATYIEPIHWEVVRKIIEKERP 83 (127)
T ss_dssp SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-GSSEEECSCCCHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-hcceeeeecCCHHHHHHHHHHhCc
Confidence 34689999999 4467889999999999999999998876543221 1222334445677888777 478
Q ss_pred CEEEEc
Q 024643 165 RSIICP 170 (265)
Q Consensus 165 d~vi~~ 170 (265)
|.++..
T Consensus 84 d~il~~ 89 (127)
T d1a9xa3 84 DAVLPT 89 (127)
T ss_dssp SEEECS
T ss_pred CCeEEE
Confidence 888866
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.77 E-value=0.12 Score=42.83 Aligned_cols=33 Identities=9% Similarity=0.112 Sum_probs=30.1
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
..|+|.|| |..|..+|..|+++|++|.++.++.
T Consensus 2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence 36899999 9999999999999999999998765
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.71 E-value=0.065 Score=40.40 Aligned_cols=25 Identities=24% Similarity=0.170 Sum_probs=22.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR 123 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G 123 (265)
.+||.|+||+|.+|+.++..|+..+
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~ 27 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGS 27 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHH
Confidence 4699999999999999999998654
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=89.45 E-value=0.1 Score=39.51 Aligned_cols=91 Identities=12% Similarity=0.084 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-C-CCeEEEEE-eCCcchh-h-hcCCccEEeeeCCCCHHHHHHH--HcCCCEEEEc
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIV-K-RTRIKALV-KDKRNAM-E-SFGTYVESMAGDASNKKFLKTA--LRGVRSIICP 170 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~-~-G~~V~~~~-R~~~~~~-~-~~~~~v~~i~~D~~d~~~l~~~--~~~~d~vi~~ 170 (265)
++.+|.|.| +|++|..+...+++ . ..+++++. |+.+... . ....++.+. ....+.+.+. +.++|+||.+
T Consensus 3 kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~---~~~~d~l~~~~~~~~iDiVf~A 78 (157)
T d1nvmb1 3 QKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT---YAGVEGLIKLPEFADIDFVFDA 78 (157)
T ss_dssp SCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE---SSHHHHHHHSGGGGGEEEEEEC
T ss_pred CCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccc---ccceeeeeecccccccCEEEEc
Confidence 357899999 79999875544443 3 35777764 5543221 1 111223322 2234455443 4579999987
Q ss_pred Cc-hHHH---HHHH--hCCCCEEEEeccc
Q 024643 171 SE-GFIS---NAGS--LKGVQHVILLSQL 193 (265)
Q Consensus 171 ~~-~~~~---~aa~--~~gv~r~V~iSS~ 193 (265)
++ +... .+.+ ++| .++|-.|+.
T Consensus 79 Tpag~h~~~~~~~~aa~~G-~~VID~s~a 106 (157)
T d1nvmb1 79 TSASAHVQNEALLRQAKPG-IRLIDLTPA 106 (157)
T ss_dssp SCHHHHHHHHHHHHHHCTT-CEEEECSTT
T ss_pred CCchhHHHhHHHHHHHHcC-CEEEEcccc
Confidence 54 2221 1222 334 366766764
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=89.44 E-value=1.4 Score=33.44 Aligned_cols=93 Identities=12% Similarity=0.065 Sum_probs=52.4
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCcch--hhhcCCccEEeeeC-----------CCCHHHHHHHHcCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKRNA--MESFGTYVESMAGD-----------ASNKKFLKTALRGV 164 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~~~--~~~~~~~v~~i~~D-----------~~d~~~l~~~~~~~ 164 (265)
+++|.|-|- |.||+.+++.+..++ .+|+++....... ..+...+....... +.-...+..+++++
T Consensus 1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v 79 (171)
T d1cf2o1 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA 79 (171)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence 457889985 999999999998876 6777765432211 11111111111111 11011234557899
Q ss_pred CEEEEcCchHHHHH----HHhCCCCEEEEeccc
Q 024643 165 RSIICPSEGFISNA----GSLKGVQHVILLSQL 193 (265)
Q Consensus 165 d~vi~~~~~~~~~a----a~~~gv~r~V~iSS~ 193 (265)
|+|+-|++.+.... -.++|+ ++|++|+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~-K~vi~~~~ 111 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGI-KAIFQGGE 111 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTC-EEEECTTS
T ss_pred CEEEEccCCCCCHHHHHHHHHcCC-CEEEECCC
Confidence 99998866553221 234675 56766654
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.13 E-value=0.24 Score=36.11 Aligned_cols=36 Identities=19% Similarity=0.233 Sum_probs=29.8
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHH----CCCeEEEEEeCCcc
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIV----KRTRIKALVKDKRN 135 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~----~G~~V~~~~R~~~~ 135 (265)
.++++|.|| |++|-+++..|.. .|.+|+++.++..-
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~ 76 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGN 76 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence 468999999 9999999998853 58999999886643
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.98 E-value=0.51 Score=42.49 Aligned_cols=95 Identities=6% Similarity=0.087 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCCc-------------------chhh----h--cCCccEEeeeCC
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKR-TRIKALVKDKR-------------------NAME----S--FGTYVESMAGDA 151 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G-~~V~~~~R~~~-------------------~~~~----~--~~~~v~~i~~D~ 151 (265)
...+|+|.|+ |++|.++++.|+..| -++++++.+.- +++. + ..+.+++...+
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~- 101 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVE- 101 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEES-
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEc-
Confidence 3578999998 789999999999999 47888765431 1110 0 12333322222
Q ss_pred CCHHHH----HHHHcCCCEEEEcCch-----HHHHHHHhCCCCEEEEeccccc
Q 024643 152 SNKKFL----KTALRGVRSIICPSEG-----FISNAGSLKGVQHVILLSQLSV 195 (265)
Q Consensus 152 ~d~~~l----~~~~~~~d~vi~~~~~-----~~~~aa~~~gv~r~V~iSS~~v 195 (265)
.+++.+ ...+.+.|+|+.+... .+.+.|...++. +|..++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~dvVv~~~~~~~~~~~l~~~c~~~~ip-~i~~~~~G~ 153 (529)
T d1yova1 102 ESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIP-LLICRTYGL 153 (529)
T ss_dssp SCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHHTCC-EEEEEEETT
T ss_pred CCchhhhhhHHHHhcCCCEEEECCCCHHHHHHHHHHHHHcCCC-EEEEeccCC
Confidence 123332 2456789999977321 256667777764 666665544
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=88.91 E-value=1.1 Score=32.08 Aligned_cols=72 Identities=8% Similarity=0.071 Sum_probs=50.8
Q ss_pred CCCEEEEEcCC----------cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--cCCC
Q 024643 98 ARDAVLVTDGD----------SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVR 165 (265)
Q Consensus 98 ~~~~vlVtGat----------G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--~~~d 165 (265)
..++|+|.|+. .+.+.+.++.|.+.|++++++..+++....-+. -..-+...--..+.+.+.+ +..|
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-~aD~lYfeplt~e~v~~Ii~~E~p~ 81 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-TSDRLYFEPVTLEDVLEIVRIEKPK 81 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-SSSEEECCCCSHHHHHHHHHHHCCS
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-hcCceEEccCCHHHHHHHHHHhCCC
Confidence 46789999993 467889999999999999999998876543221 1222233334567777766 5788
Q ss_pred EEEEc
Q 024643 166 SIICP 170 (265)
Q Consensus 166 ~vi~~ 170 (265)
.|+..
T Consensus 82 ~ii~~ 86 (121)
T d1a9xa4 82 GVIVQ 86 (121)
T ss_dssp EEECS
T ss_pred EEEee
Confidence 88866
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.84 E-value=0.22 Score=40.46 Aligned_cols=31 Identities=19% Similarity=0.115 Sum_probs=28.8
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|+|| |..|...+..|.++|++|+++-++.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789999 9999999999999999999998755
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=88.25 E-value=0.46 Score=35.39 Aligned_cols=81 Identities=12% Similarity=0.041 Sum_probs=45.7
Q ss_pred CCEEEEEcCCcHHHHH-HHHHHHHC-CCeEEEEE-eCCcchhhhcCC-ccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-h
Q 024643 99 RDAVLVTDGDSDIGQM-VILSLIVK-RTRIKALV-KDKRNAMESFGT-YVESMAGDASNKKFLKTALRGVRSIICPSE-G 173 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~-l~~~Ll~~-G~~V~~~~-R~~~~~~~~~~~-~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-~ 173 (265)
+++|.|.|. |.+|+. .+..+... +.++++++ ++.+++...... ++.+ .++.+ .+.+++|+|+.+++ .
T Consensus 1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~----~~~~~---~l~~~~D~V~I~tp~~ 72 (164)
T d1tlta1 1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY----ADSLS---SLAASCDAVFVHSSTA 72 (164)
T ss_dssp CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB----CSSHH---HHHTTCSEEEECSCTT
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc----cccch---hhhhhcccccccccch
Confidence 468999996 899976 45555543 57777654 666655443211 1111 23333 34578999987743 2
Q ss_pred HH---HHHHHhCCCCEEE
Q 024643 174 FI---SNAGSLKGVQHVI 188 (265)
Q Consensus 174 ~~---~~aa~~~gv~r~V 188 (265)
.. ...+.++| ++++
T Consensus 73 ~h~~~~~~al~~g-k~V~ 89 (164)
T d1tlta1 73 SHFDVVSTLLNAG-VHVC 89 (164)
T ss_dssp HHHHHHHHHHHTT-CEEE
T ss_pred hcccccccccccc-ceee
Confidence 22 22334556 4643
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=87.53 E-value=3.5 Score=29.33 Aligned_cols=87 Identities=22% Similarity=0.225 Sum_probs=55.2
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEc-CchHHHH
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICP-SEGFISN 177 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~-~~~~~~~ 177 (265)
..+|+|-|-||..|+.-+++.++-|-+|++-+...+.-.+.. ++-+ .|. =.+.+++ .++|+-+.. .+.+..+
T Consensus 7 ~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~~--giPV--f~t-V~eAv~~--~~~d~SvIfVPp~~a~d 79 (121)
T d1oi7a1 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEVL--GVPV--YDT-VKEAVAH--HEVDASIIFVPAPAAAD 79 (121)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET--TEEE--ESS-HHHHHHH--SCCSEEEECCCHHHHHH
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEEE--CCch--Hhh-HHHHHHh--cCCeEEEEeeCHHHHHH
Confidence 458999999999999999999999999988765433222111 1111 111 1223332 367765544 5555555
Q ss_pred H---HHhCCCCEEEEecc
Q 024643 178 A---GSLKGVQHVILLSQ 192 (265)
Q Consensus 178 a---a~~~gv~r~V~iSS 192 (265)
+ +.++|++.+|.++-
T Consensus 80 Ai~EAi~agI~liv~ITE 97 (121)
T d1oi7a1 80 AALEAAHAGIPLIVLITE 97 (121)
T ss_dssp HHHHHHHTTCSEEEECCS
T ss_pred HHHHHHhCCCcEEEEecC
Confidence 5 34689998887763
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=87.44 E-value=0.43 Score=34.92 Aligned_cols=101 Identities=19% Similarity=0.101 Sum_probs=58.9
Q ss_pred CCEEEEEcCC---cHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc-h-
Q 024643 99 RDAVLVTDGD---SDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTALRGVRSIICPSE-G- 173 (265)
Q Consensus 99 ~~~vlVtGat---G~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~-~- 173 (265)
.+.|.|.||| +..|..+++.|.+.|+++..+.-++.. .+..+ .. . +.+ +.++-..+|.++.+.+ .
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~-~~i~g--~~-~---~~~---l~~i~~~iD~v~v~~p~~~ 82 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG-EELFG--EE-A---VAS---LLDLKEPVDILDVFRPPSA 82 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT-SEETT--EE-C---BSS---GGGCCSCCSEEEECSCHHH
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecccc-ceeec--ee-c---ccc---hhhccCCCceEEEeccHHH
Confidence 4689999998 559999999999999998876543211 11111 11 1 111 2222246788887732 2
Q ss_pred ---HHHHHHHhCCCCEEEEecccccccCCCCcccccchhHHHHHHHHHHHHHhCCCCEE
Q 024643 174 ---FISNAGSLKGVQHVILLSQLSVYRGSGGIQALMKGNARKLAEQDESMLMASGIPYT 229 (265)
Q Consensus 174 ---~~~~aa~~~gv~r~V~iSS~~v~~~~~~~~~~~~~~~~~~k~~~E~~l~~~gl~~t 229 (265)
.+.+ +.+.|++.+++-+.. . ..++.+..++.|++++
T Consensus 83 v~~~v~~-~~~~g~k~i~~q~G~--~-----------------~~e~~~~a~~~Gi~vV 121 (136)
T d1iuka_ 83 LMDHLPE-VLALRPGLVWLQSGI--R-----------------HPEFEKALKEAGIPVV 121 (136)
T ss_dssp HTTTHHH-HHHHCCSCEEECTTC--C-----------------CHHHHHHHHHTTCCEE
T ss_pred HHHHHHH-HHhhCCCeEEEecCc--c-----------------CHHHHHHHHHcCCEEE
Confidence 2333 456688776553321 1 0135566777888764
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=87.22 E-value=2.6 Score=30.39 Aligned_cols=85 Identities=12% Similarity=0.057 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhhcCCccEEeeeCCCCHHHHHHHH--cCCCEEEEc-CchH
Q 024643 98 ARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMESFGTYVESMAGDASNKKFLKTAL--RGVRSIICP-SEGF 174 (265)
Q Consensus 98 ~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~~~~~v~~i~~D~~d~~~l~~~~--~~~d~vi~~-~~~~ 174 (265)
+..+|+|-|-||..|+.-++++++-|-+|++-+.....-.... ++-+ .| ++.++. .++|+-+.. .+.+
T Consensus 14 k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~~~--giPV--f~-----tV~eA~~~~~~daSvIfVPp~~ 84 (130)
T d1euca1 14 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKTHL--GLPV--FN-----TVKEAKEQTGATASVIYVPPPF 84 (130)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEET--TEEE--ES-----SHHHHHHHHCCCEEEECCCHHH
T ss_pred CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCcccc--Cccc--hh-----hHHHHHHhcCCcEEEEecCHHH
Confidence 3568999999999999999999999999988765433222111 1111 11 233333 267765544 5556
Q ss_pred HHHH---HHhCCCCEEEEec
Q 024643 175 ISNA---GSLKGVQHVILLS 191 (265)
Q Consensus 175 ~~~a---a~~~gv~r~V~iS 191 (265)
..++ +.++|++-+|.++
T Consensus 85 a~dAi~EAi~agI~liV~IT 104 (130)
T d1euca1 85 AAAAINEAIDAEVPLVVCIT 104 (130)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhCCCCEEEEec
Confidence 5555 3458999888776
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.13 E-value=0.7 Score=35.24 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
+..+++|+|.|.+.-+|+.++..|+++|+.|+......
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t 73 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT 73 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCceEEEeccc
Confidence 45689999999999999999999999999998866543
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.08 E-value=1.2 Score=33.43 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=42.3
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC-CCeEEEE-EeCCcchhhh---c--CCccEEeeeCCCCHHHHHHHHcCCCEEEEcCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK-RTRIKAL-VKDKRNAMES---F--GTYVESMAGDASNKKFLKTALRGVRSIICPSE 172 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~-~R~~~~~~~~---~--~~~v~~i~~D~~d~~~l~~~~~~~d~vi~~~~ 172 (265)
++|.|.|+ |.+|+..++.|... +++|+++ +++.+++... . +....+ +.|.+.+-+ -.++|+|+.+++
T Consensus 2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~-~~~iD~v~I~tp 75 (184)
T d1ydwa1 2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI----HGSYESLLE-DPEIDALYVPLP 75 (184)
T ss_dssp EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE----ESSHHHHHH-CTTCCEEEECCC
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee----cCcHHHhhh-ccccceeeeccc
Confidence 58999997 88999999988776 5788765 5666554432 1 111222 245444433 246899988744
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=86.97 E-value=0.29 Score=38.49 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=29.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
|+|.|| |-.|...+..|.++|++|.++.++..
T Consensus 5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 899999 99999999999999999999988753
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=86.93 E-value=0.41 Score=38.42 Aligned_cols=40 Identities=13% Similarity=0.035 Sum_probs=34.4
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchh
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAM 137 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~ 137 (265)
..+++|+|-|- |.+|+++++.|.+.|.+|++.+.+.....
T Consensus 37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~ 76 (230)
T d1leha1 37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVS 76 (230)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHH
Confidence 45789999988 99999999999999999998887765443
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.74 E-value=1.1 Score=34.69 Aligned_cols=70 Identities=14% Similarity=0.124 Sum_probs=42.8
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcch-hhh---------cCCccEEee-eCCCCHHHHHHHH-cCCCEE
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNA-MES---------FGTYVESMA-GDASNKKFLKTAL-RGVRSI 167 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~-~~~---------~~~~v~~i~-~D~~d~~~l~~~~-~~~d~v 167 (265)
|+|+|.|. +..|..+++.|++.|++|.++.-.+++. ... ...++.++. -++.+.+.+...- ..+|.+
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~~~Dli 79 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQLSPDVI 79 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHTCCSEE
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhhcccce
Confidence 78999966 6689999999999999998765332211 100 111344443 4566655443322 367887
Q ss_pred EEc
Q 024643 168 ICP 170 (265)
Q Consensus 168 i~~ 170 (265)
+++
T Consensus 80 i~~ 82 (203)
T d2blna2 80 FSF 82 (203)
T ss_dssp EEE
T ss_pred eee
Confidence 765
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=86.56 E-value=0.34 Score=40.90 Aligned_cols=33 Identities=9% Similarity=0.017 Sum_probs=26.0
Q ss_pred CEEEEEcC------CcHHH---HHHHHHHHHCCCeEEEEEeC
Q 024643 100 DAVLVTDG------DSDIG---QMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 100 ~~vlVtGa------tG~IG---~~l~~~Ll~~G~~V~~~~R~ 132 (265)
|||++++. +|++| ..|++.|.++||+|++++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 67888664 46776 56799999999999998743
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=86.29 E-value=0.47 Score=36.14 Aligned_cols=36 Identities=8% Similarity=0.141 Sum_probs=31.7
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEe
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVK 131 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R 131 (265)
+..+++|+|.|.+.-+|+.++..|.++|+.|+....
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~ 69 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHR 69 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECS
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhcccccccc
Confidence 446899999999999999999999999999987643
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=86.17 E-value=0.34 Score=40.19 Aligned_cols=34 Identities=15% Similarity=0.091 Sum_probs=30.7
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
-.|+|+|| |..|..++..|.++|.+|+++.++.+
T Consensus 8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 35999999 99999999999999999999988653
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=85.72 E-value=0.24 Score=39.90 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=29.4
Q ss_pred CCEEEEEcCCcHHHHH-----HHHHHHHCCCeEEEEEeCCc
Q 024643 99 RDAVLVTDGDSDIGQM-----VILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~-----l~~~Ll~~G~~V~~~~R~~~ 134 (265)
+++|+|+| -|++|+. |+..|+++|++|.+++-|+.
T Consensus 1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 45788998 8999985 66688899999999999864
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=85.44 E-value=0.59 Score=37.65 Aligned_cols=35 Identities=11% Similarity=0.092 Sum_probs=30.8
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
..+++|+|-|- |.+|+++++.|.+.|.+|++++-.
T Consensus 29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence 35789999986 999999999999999999988754
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=84.62 E-value=0.4 Score=38.60 Aligned_cols=38 Identities=11% Similarity=0.226 Sum_probs=32.5
Q ss_pred CCCCEEEEEcCCcHHHHH-----HHHHHHHCCCeEEEEEeCCc
Q 024643 97 EARDAVLVTDGDSDIGQM-----VILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~-----l~~~Ll~~G~~V~~~~R~~~ 134 (265)
..+.+|+|+.|-|++|+. |+..|+++|++|.+++-|+.
T Consensus 17 ~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 17 RNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp TTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred cCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 456788899889999996 57888999999999999875
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=84.37 E-value=0.83 Score=37.91 Aligned_cols=37 Identities=11% Similarity=-0.000 Sum_probs=32.1
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
...+++|+|-|- |.+|+++++.|.+.|++|++++-+.
T Consensus 33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~ 69 (293)
T d1hwxa1 33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESD 69 (293)
T ss_dssp SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccc
Confidence 345789999998 9999999999999999999887543
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.84 E-value=0.88 Score=33.75 Aligned_cols=34 Identities=21% Similarity=0.191 Sum_probs=28.6
Q ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeCC
Q 024643 99 RDAVLVTDGDSDIGQMVILSLIVKRT-RIKALVKDK 133 (265)
Q Consensus 99 ~~~vlVtGatG~IG~~l~~~Ll~~G~-~V~~~~R~~ 133 (265)
+++|+|.|| |.+|-..+..+++.|. .|+++.|..
T Consensus 45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 567999998 9999999999999996 477777654
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=83.81 E-value=0.51 Score=36.72 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=29.2
Q ss_pred CEEEEEcCCcHHHHHHHHHHHHC--CCeEEEEEeCC
Q 024643 100 DAVLVTDGDSDIGQMVILSLIVK--RTRIKALVKDK 133 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~Ll~~--G~~V~~~~R~~ 133 (265)
++|+|+|| |--|...|.+|.+. |++|+++.+.+
T Consensus 2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~ 36 (230)
T d1cjca2 2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL 36 (230)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 48999999 99999999999875 78999998875
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=83.34 E-value=0.56 Score=39.13 Aligned_cols=30 Identities=13% Similarity=-0.044 Sum_probs=28.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
|+|.|+ |+-|..+|.+|+++|++|.++-+.
T Consensus 5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence 789988 999999999999999999999874
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.07 E-value=0.53 Score=38.28 Aligned_cols=31 Identities=16% Similarity=0.211 Sum_probs=29.0
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|.|+ |..|...+..|+++|.+|+++.+..
T Consensus 19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~ 49 (308)
T d1y0pa2 19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP 49 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 899999 9999999999999999999998765
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=82.74 E-value=0.67 Score=37.70 Aligned_cols=36 Identities=8% Similarity=-0.044 Sum_probs=31.4
Q ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeC
Q 024643 96 EEARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKD 132 (265)
Q Consensus 96 ~~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~ 132 (265)
...+++|+|-|- |.+|+++++.|.+.|++|++++-.
T Consensus 33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~ 68 (255)
T d1bgva1 33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGP 68 (255)
T ss_dssp CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEET
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 456789999996 999999999999999999988753
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.69 E-value=1.5 Score=34.06 Aligned_cols=89 Identities=10% Similarity=0.136 Sum_probs=56.7
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCC---CeEEEEEeCCcchhhhcCCccEEeee-----------CC--------CCHHHHH
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKR---TRIKALVKDKRNAMESFGTYVESMAG-----------DA--------SNKKFLK 158 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G---~~V~~~~R~~~~~~~~~~~~v~~i~~-----------D~--------~d~~~l~ 158 (265)
+|-|.|- |+-|..++..|.+.+ .+.+++.-|.+.+.... ...++..+ |. .+.+.+.
T Consensus 3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~-~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~ 80 (198)
T d1ofua1 3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIA-ARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERIS 80 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCS-CSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHH
T ss_pred eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCC-ccceeccccccccCCCCCCChHHHHHHHHHHHHHHH
Confidence 4678887 889999999999987 46666666655443211 11111111 11 2556788
Q ss_pred HHHcCCCEEEEc---C-------chHHHHHHHhCCCCEEEEec
Q 024643 159 TALRGVRSIICP---S-------EGFISNAGSLKGVQHVILLS 191 (265)
Q Consensus 159 ~~~~~~d~vi~~---~-------~~~~~~aa~~~gv~r~V~iS 191 (265)
+.++++|.+|.+ . .+.+...+++.++--+-++.
T Consensus 81 ~~l~~~d~vfi~AGlGGGTGtgaapviA~~ake~g~lvvaivt 123 (198)
T d1ofua1 81 EVLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVT 123 (198)
T ss_dssp HHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHhCCCCeEEEEecCCCCccccHHHHHHHHHHHcCCCEEEEEe
Confidence 899999999976 1 13477778888865444443
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=82.62 E-value=0.69 Score=35.48 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=28.6
Q ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCC
Q 024643 102 VLVTDGDSDIGQMVILSLIVKRTRIKALVKDK 133 (265)
Q Consensus 102 vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~ 133 (265)
|+|.|| |..|...+..+.+.|.+|.++.++.
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~ 35 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE 35 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence 789999 9999999999999999999998753
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=82.39 E-value=1.1 Score=33.35 Aligned_cols=69 Identities=12% Similarity=-0.066 Sum_probs=45.6
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCcchhhh-------------------cCCccEEeeeCCCCHHHH
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKRNAMES-------------------FGTYVESMAGDASNKKFL 157 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~~~~~~-------------------~~~~v~~i~~D~~d~~~l 157 (265)
.++.+||..|+. .|+ .+..|+++|++|++++.++...+.. ......++.+|+.+...
T Consensus 19 ~~~~rvLd~GCG--~G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~- 94 (201)
T d1pjza_ 19 VPGARVLVPLCG--KSQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA- 94 (201)
T ss_dssp CTTCEEEETTTC--CSH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH-
T ss_pred CCCCEEEEecCc--CCH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc-
Confidence 357899999983 444 5568888999999999987433211 12345788888877443
Q ss_pred HHHHcCCCEEEEc
Q 024643 158 KTALRGVRSIICP 170 (265)
Q Consensus 158 ~~~~~~~d~vi~~ 170 (265)
......|.|+..
T Consensus 95 -~~~~~~D~i~~~ 106 (201)
T d1pjza_ 95 -RDIGHCAAFYDR 106 (201)
T ss_dssp -HHHHSEEEEEEE
T ss_pred -ccccceeEEEEE
Confidence 223456777654
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=82.37 E-value=0.62 Score=36.93 Aligned_cols=33 Identities=9% Similarity=0.157 Sum_probs=30.4
Q ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 101 AVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
-|+|.|| |-.|...+..|.++|++|.++.+++.
T Consensus 6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 4899999 99999999999999999999998764
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=82.06 E-value=0.54 Score=38.48 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=28.8
Q ss_pred EEEEEcCCcHHHHHHHHHHH-----HCCCeEEEEEeCCc
Q 024643 101 AVLVTDGDSDIGQMVILSLI-----VKRTRIKALVKDKR 134 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll-----~~G~~V~~~~R~~~ 134 (265)
-|+|.|| |-.|..++..|+ .+|++|+++.|++.
T Consensus 9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~ 46 (360)
T d1pn0a1 9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRST 46 (360)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence 4899999 999999999996 47999999988764
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=82.04 E-value=0.75 Score=34.46 Aligned_cols=65 Identities=9% Similarity=0.075 Sum_probs=40.3
Q ss_pred CEEEEEcCCcHHHHHHHHH-HHH--C---CCeEEEEEeCCcchhhh-------cCCccEEeeeCCCCHHHHHHHHcCCCE
Q 024643 100 DAVLVTDGDSDIGQMVILS-LIV--K---RTRIKALVKDKRNAMES-------FGTYVESMAGDASNKKFLKTALRGVRS 166 (265)
Q Consensus 100 ~~vlVtGatG~IG~~l~~~-Ll~--~---G~~V~~~~R~~~~~~~~-------~~~~v~~i~~D~~d~~~l~~~~~~~d~ 166 (265)
|||.|.|| |.+|...+-. |+. . ..++.+++.++++++.. ......+... ++ ..++++++|+
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t--~~---~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLIS--DT---FEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEEC--SS---HHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEe--cC---cccccCCCCE
Confidence 78999999 5566555533 222 1 35899999988765432 1222332221 23 3467899999
Q ss_pred EEEc
Q 024643 167 IICP 170 (265)
Q Consensus 167 vi~~ 170 (265)
|+.+
T Consensus 75 VVit 78 (162)
T d1up7a1 75 VIFQ 78 (162)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9987
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=81.96 E-value=0.72 Score=37.12 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=29.1
Q ss_pred EEEEEcCCcHHHHHHHHHHHHC-CCeEEEEEeCC
Q 024643 101 AVLVTDGDSDIGQMVILSLIVK-RTRIKALVKDK 133 (265)
Q Consensus 101 ~vlVtGatG~IG~~l~~~Ll~~-G~~V~~~~R~~ 133 (265)
-|+|.|| |.-|...+..|+++ |++|.++.+.+
T Consensus 35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence 3999999 99999999999875 99999999875
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=81.22 E-value=0.64 Score=32.18 Aligned_cols=37 Identities=14% Similarity=-0.004 Sum_probs=30.7
Q ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCCc
Q 024643 97 EARDAVLVTDGDSDIGQMVILSLIVKRTRIKALVKDKR 134 (265)
Q Consensus 97 ~~~~~vlVtGatG~IG~~l~~~Ll~~G~~V~~~~R~~~ 134 (265)
-.+++|+|.|+ |.-|..++..|+...-+|+...|...
T Consensus 30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 45789999999 89999999999988877776766543
|