Citrus Sinensis ID: 024648


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
MATETEAAAPPLALADAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL
cccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccEEccHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcc
cccccHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHHHHHccccEEEccccHHHHHHccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccEEEccccHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcHHHHHHcccHHHHHHHHEEcc
mateteaaapplaladAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNIlrndgipgifrgfgtsavgsmpgrVLCLTSLEVSKDMMLKytegvdmpeatRVGVANAVAGMLSNLVSCVYFVPLDVICQRLmvqglpgttycngpIDVVCKVIKsegfrglyrgfgltaltqspasaLWWGAYGAAQHMIWRslgygddmekpsqseMITVQASAGMFAGACStvittpidtVKTRLQVAL
mateteaaapplaladAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTvittpidtVKTRLQVAL
MateteaaapplalaDAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL
************ALADAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYG***********ITVQASAGMFAGACSTVITTPIDTVKT******
**********************RLDKTRFHIIGAILFTAQSALLHPTVVVKTRM*V***********SVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTE*VDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRL**************IDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYG****KPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL
*********PPLALADAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL
********************WDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLG********SQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATETEAAAPPLALADAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query265 2.2.26 [Sep-21-2011]
Q54VX4345 Mitochondrial substrate c yes no 0.928 0.713 0.293 7e-27
Q5RD67314 Solute carrier family 25 yes no 0.856 0.722 0.306 2e-26
Q96H78314 Solute carrier family 25 yes no 0.856 0.722 0.306 2e-26
Q8BGF9314 Solute carrier family 25 yes no 0.849 0.716 0.292 3e-26
Q55E45303 Mitochondrial substrate c no no 0.803 0.702 0.302 4e-20
Q55DY8308 Mitoferrin OS=Dictyosteli no no 0.822 0.707 0.288 3e-17
Q03829368 Uncharacterized mitochond yes no 0.781 0.562 0.292 4e-16
Q552L9366 Mitochondrial substrate c no no 0.849 0.614 0.258 5e-15
Q9FHX2412 Protein MITOFERRINLIKE 1, no no 0.807 0.519 0.293 2e-14
Q12482 902 Mitochondrial aspartate-g no no 0.830 0.243 0.247 2e-14
>sp|Q54VX4|MCFJ_DICDI Mitochondrial substrate carrier family protein J OS=Dictyostelium discoideum GN=mcfJ PE=2 SV=1 Back     alignment and function desciption
 Score =  120 bits (302), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 124/276 (44%), Gaps = 30/276 (10%)

Query: 16  DAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHS-----GVSQMRG-LSV 69
           +  I WD LD  R++    +L  +   L+ P  V++TR+QV  S        Q  G    
Sbjct: 18  NKRIQWDDLDPKRYYFYNFLLGGSIDLLMFPLDVIRTRLQVQGSQNVIQSFPQYNGTFDG 77

Query: 70  FRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVA 129
           F+ ++R +G   +++GF TS  G +  R +   S E  K   LK     D    + +   
Sbjct: 78  FKKLIRLEGKRALYKGFLTSECGYLCSRAIYFGSYEFVKQGFLKGRSDSD----SDLLFV 133

Query: 130 NAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYRGF 189
             ++G +S  ++ V +VP DV  Q + +QG        G  DV  K+    G +GLY+GF
Sbjct: 134 TTISGAISEALASVIWVPFDVATQSVQIQGSLSKPKYKGGSDVFKKIYGERGIKGLYKGF 193

Query: 190 GLTALTQSPASALWWGAYGAA-----QHMIWRSLGYGD------------DMEKPS---Q 229
           G T +   P S +WWG Y  +     Q  I + LG  +            D   PS   +
Sbjct: 194 GATIIRNVPYSGIWWGTYEISKSKLTQFNIRQKLGLKERSSHSLAVSAEIDKNNPSHEVE 253

Query: 230 SEMITVQASAGMFAGACSTVITTPIDTVKTRLQVAL 265
           +E   +   +G FA   +T IT P+D  KTRLQ  +
Sbjct: 254 NEDPIIHFISGFFAAVFATSITNPLDVAKTRLQTGV 289




Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane.
Dictyostelium discoideum (taxid: 44689)
>sp|Q5RD67|S2544_PONAB Solute carrier family 25 member 44 OS=Pongo abelii GN=SLC25A44 PE=2 SV=2 Back     alignment and function description
>sp|Q96H78|S2544_HUMAN Solute carrier family 25 member 44 OS=Homo sapiens GN=SLC25A44 PE=2 SV=1 Back     alignment and function description
>sp|Q8BGF9|S2544_MOUSE Solute carrier family 25 member 44 OS=Mus musculus GN=Slc25a44 PE=2 SV=1 Back     alignment and function description
>sp|Q55E45|MCFE_DICDI Mitochondrial substrate carrier family protein E OS=Dictyostelium discoideum GN=mcfE PE=3 SV=1 Back     alignment and function description
>sp|Q55DY8|MFRN_DICDI Mitoferrin OS=Dictyostelium discoideum GN=mcfF PE=3 SV=1 Back     alignment and function description
>sp|Q03829|YM39_YEAST Uncharacterized mitochondrial carrier YMR166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMR166C PE=1 SV=1 Back     alignment and function description
>sp|Q552L9|S2540_DICDI Mitochondrial substrate carrier family protein H OS=Dictyostelium discoideum GN=mcfH PE=3 SV=1 Back     alignment and function description
>sp|Q9FHX2|MFL1_ARATH Protein MITOFERRINLIKE 1, chloroplastic OS=Arabidopsis thaliana GN=MFL1 PE=2 SV=1 Back     alignment and function description
>sp|Q12482|AGC1_YEAST Mitochondrial aspartate-glutamate transporter AGC1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AGC1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
357448697323 Solute carrier family 25 member [Medicag 0.981 0.804 0.801 1e-122
225432128324 PREDICTED: solute carrier family 25 memb 0.992 0.811 0.795 1e-121
449459860327 PREDICTED: solute carrier family 25 memb 0.939 0.761 0.804 1e-118
255556522 405 protein with unknown function [Ricinus c 0.992 0.649 0.779 1e-118
356532477330 PREDICTED: solute carrier family 25 memb 0.977 0.784 0.776 1e-116
224101493334 predicted protein [Populus trichocarpa] 0.992 0.787 0.758 1e-116
242057253328 hypothetical protein SORBIDRAFT_03g01334 0.950 0.768 0.727 1e-107
194694716327 unknown [Zea mays] gi|414877339|tpg|DAA5 0.988 0.801 0.688 1e-107
212721338327 uncharacterized protein LOC100194020 [Ze 0.988 0.801 0.684 1e-107
125525711329 hypothetical protein OsI_01701 [Oryza sa 0.950 0.765 0.719 1e-106
>gi|357448697|ref|XP_003594624.1| Solute carrier family 25 member [Medicago truncatula] gi|355483672|gb|AES64875.1| Solute carrier family 25 member [Medicago truncatula] Back     alignment and taxonomy information
 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 210/262 (80%), Positives = 239/262 (91%), Gaps = 2/262 (0%)

Query: 4   ETEAAA-PPLALADAEINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVS 62
           +TEAA  P  AL+D +INWDRLDKTRFHIIGA+LFTAQSALLHPT VVKTRMQVA SG+S
Sbjct: 2   DTEAATTPQFALSDTDINWDRLDKTRFHIIGAVLFTAQSALLHPTAVVKTRMQVAASGLS 61

Query: 63  QMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPE 122
            M+G+SVF +ILR+DGIPGIFRGFGTSA+GSMPGRVL LTSLE+SKD MLK+T+G D+PE
Sbjct: 62  NMKGMSVFTHILRSDGIPGIFRGFGTSAIGSMPGRVLALTSLEMSKDFMLKHTQGSDIPE 121

Query: 123 ATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGF 182
           A+R+G+ANAVAGM+SNLVSCVYFVPLDVICQRLMVQGLPGTTYC GP DV+ +V+ +EG 
Sbjct: 122 ASRIGLANAVAGMVSNLVSCVYFVPLDVICQRLMVQGLPGTTYCKGPFDVIRRVVHAEGV 181

Query: 183 RGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDME-KPSQSEMITVQASAGM 241
           RGLYRGFGLTA++QSPASALWWG+YGAAQH+IWRSLGY DDME KPS  EM+TVQA+AGM
Sbjct: 182 RGLYRGFGLTAVSQSPASALWWGSYGAAQHIIWRSLGYKDDMEKKPSHVEMVTVQATAGM 241

Query: 242 FAGACSTVITTPIDTVKTRLQV 263
            AGA S+VITTPIDTVKTRLQV
Sbjct: 242 VAGASSSVITTPIDTVKTRLQV 263




Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225432128|ref|XP_002274536.1| PREDICTED: solute carrier family 25 member 44 [Vitis vinifera] gi|297736782|emb|CBI25983.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449459860|ref|XP_004147664.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus] gi|449514787|ref|XP_004164480.1| PREDICTED: solute carrier family 25 member 44-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255556522|ref|XP_002519295.1| protein with unknown function [Ricinus communis] gi|223541610|gb|EEF43159.1| protein with unknown function [Ricinus communis] Back     alignment and taxonomy information
>gi|356532477|ref|XP_003534799.1| PREDICTED: solute carrier family 25 member 44-like [Glycine max] Back     alignment and taxonomy information
>gi|224101493|ref|XP_002312303.1| predicted protein [Populus trichocarpa] gi|222852123|gb|EEE89670.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|242057253|ref|XP_002457772.1| hypothetical protein SORBIDRAFT_03g013340 [Sorghum bicolor] gi|241929747|gb|EES02892.1| hypothetical protein SORBIDRAFT_03g013340 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|194694716|gb|ACF81442.1| unknown [Zea mays] gi|414877339|tpg|DAA54470.1| TPA: hypothetical protein ZEAMMB73_115521 [Zea mays] Back     alignment and taxonomy information
>gi|212721338|ref|NP_001132555.1| uncharacterized protein LOC100194020 [Zea mays] gi|195638214|gb|ACG38575.1| hypothetical protein [Zea mays] Back     alignment and taxonomy information
>gi|125525711|gb|EAY73825.1| hypothetical protein OsI_01701 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query265
TAIR|locus:2143161323 AT5G15640 [Arabidopsis thalian 0.924 0.758 0.52 6.5e-67
TAIR|locus:2032728349 AT1G72820 [Arabidopsis thalian 0.916 0.696 0.405 2e-49
TAIR|locus:2179704342 AT5G26200 [Arabidopsis thalian 0.909 0.704 0.392 9.1e-45
UNIPROTKB|F1PD97342 SLC25A44 "Uncharacterized prot 0.856 0.663 0.302 2.2e-25
UNIPROTKB|Q96H78314 SLC25A44 "Solute carrier famil 0.856 0.722 0.306 2.9e-25
MGI|MGI:2444391314 Slc25a44 "solute carrier famil 0.849 0.716 0.296 5.9e-25
RGD|1307244337 Slc25a44 "solute carrier famil 0.849 0.667 0.300 5.9e-25
UNIPROTKB|F1RLQ4331 SLC25A44 "Uncharacterized prot 0.849 0.679 0.292 9.7e-25
ZFIN|ZDB-GENE-050320-89316 slc25a44b "solute carrier fami 0.849 0.712 0.301 9.7e-25
UNIPROTKB|A0JN83314 SLC25A44 "Uncharacterized prot 0.849 0.716 0.292 1.2e-24
TAIR|locus:2143161 AT5G15640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
 Identities = 130/250 (52%), Positives = 179/250 (71%)

Query:    18 EINWDRLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSGVSQMRGLSVFRNILRND 77
             EINWD+LDK RF+I GA LFT  +  L+P  VVKTR+QVA   +++    SV + IL+ND
Sbjct:    16 EINWDKLDKRRFYINGAGLFTGVTVALYPVSVVKTRLQVASKEIAERSAFSVVKGILKND 75

Query:    78 GIPGIFRGFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLS 137
             G+PG++RGFGT   G++P R++ LT+LE +K    K    +++ E T+  +AN +AGM +
Sbjct:    76 GVPGLYRGFGTVITGAVPARIIFLTALETTKISAFKLVAPLELSEPTQAAIANGIAGMTA 135

Query:   138 NLVSCVYFVPLDVICQRLMVQGLPG-TTYCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQ 196
             +L S   FVP+DV+ Q+LMVQG  G  TY  G IDV  K+IKS G RGLYRGFGL+ +T 
Sbjct:   136 SLFSQAVFVPIDVVSQKLMVQGYSGHATYTGG-IDVATKIIKSYGVRGLYRGFGLSVMTY 194

Query:   197 SPASALWWGAYGAAQHMIWRSLGYGDDMEK---PSQSEMITVQASAGMFAGACSTVITTP 253
             SP+SA WW +YG++Q +IWR LGYG D +    PS+S+++ VQA+ G+ AGA ++ ITTP
Sbjct:   195 SPSSAAWWASYGSSQRVIWRFLGYGGDSDATAAPSKSKIVMVQAAGGIIAGATASSITTP 254

Query:   254 IDTVKTRLQV 263
             +DT+KTRLQV
Sbjct:   255 LDTIKTRLQV 264


GO:0005739 "mitochondrion" evidence=ISM;IDA
GO:0005743 "mitochondrial inner membrane" evidence=ISS
GO:0006810 "transport" evidence=IEA;ISS
GO:0006839 "mitochondrial transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
TAIR|locus:2032728 AT1G72820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179704 AT5G26200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1PD97 SLC25A44 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q96H78 SLC25A44 "Solute carrier family 25 member 44" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2444391 Slc25a44 "solute carrier family 25, member 44" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1307244 Slc25a44 "solute carrier family 25, member 44" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1RLQ4 SLC25A44 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050320-89 slc25a44b "solute carrier family 25, member 44 b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A0JN83 SLC25A44 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_LG_VIII0876
hypothetical protein (334 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 3e-17
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 7e-12
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 8e-08
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 6e-07
PTZ00168259 PTZ00168, PTZ00168, mitochondrial carrier protein; 1e-06
PTZ00169300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 0.004
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
 Score = 74.6 bits (184), Expect = 3e-17
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 128 VANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKSEGFRGLYR 187
           +A  +AG ++   +  Y  PLDV+  RL      G+    G +D   K+ K EG RGLY+
Sbjct: 10  LAGGIAGAIA--ATVTY--PLDVVKTRLQSSAAGGSRKYKGILDCFKKIYKEEGIRGLYK 65

Query: 188 GFGLTALTQSPASALWWGAYGAAQHMIWRSL 218
           G     L  +PA+A+++G Y   + ++ + L
Sbjct: 66  GLLPNLLRVAPAAAIYFGTYETLKKLLLKKL 96


Length = 96

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information
>gnl|CDD|185494 PTZ00168, PTZ00168, mitochondrial carrier protein; Provisional Back     alignment and domain information
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 265
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0770353 consensus Predicted mitochondrial carrier protein 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 100.0
KOG0765333 consensus Predicted mitochondrial carrier protein 100.0
KOG0752320 consensus Mitochondrial solute carrier protein [En 100.0
KOG0766297 consensus Predicted mitochondrial carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
KOG0036463 consensus Predicted mitochondrial carrier protein 100.0
KOG0753317 consensus Mitochondrial fatty acid anion carrier p 100.0
KOG0751 694 consensus Mitochondrial aspartate/glutamate carrie 100.0
KOG0764299 consensus Mitochondrial FAD carrier protein [Energ 100.0
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 100.0
KOG0767333 consensus Mitochondrial phosphate carrier protein 100.0
KOG0768323 consensus Mitochondrial carrier protein PET8 [Ener 100.0
PTZ00169300 ADP/ATP transporter on adenylate translocase; Prov 100.0
KOG0769308 consensus Predicted mitochondrial carrier protein 100.0
KOG0757319 consensus Mitochondrial carrier protein - Rim2p/Mr 100.0
KOG0760302 consensus Mitochondrial carrier protein MRS3/4 [En 100.0
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 100.0
KOG0750304 consensus Mitochondrial solute carrier protein [En 100.0
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 100.0
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 100.0
KOG0762311 consensus Mitochondrial carrier protein [Energy pr 100.0
PTZ00168259 mitochondrial carrier protein; Provisional 100.0
KOG0758297 consensus Mitochondrial carnitine-acylcarnitine ca 100.0
KOG0759286 consensus Mitochondrial oxoglutarate/malate carrie 99.98
KOG0754294 consensus Mitochondrial oxodicarboxylate carrier p 99.97
KOG0751694 consensus Mitochondrial aspartate/glutamate carrie 99.97
KOG0761361 consensus Mitochondrial carrier protein CGI-69 [En 99.97
KOG0036463 consensus Predicted mitochondrial carrier protein 99.96
KOG0763301 consensus Mitochondrial ornithine transporter [Ene 99.96
KOG0749298 consensus Mitochondrial ADP/ATP carrier proteins [ 99.96
KOG0756299 consensus Mitochondrial tricarboxylate/dicarboxyla 99.95
KOG0750304 consensus Mitochondrial solute carrier protein [En 99.95
KOG0765333 consensus Predicted mitochondrial carrier protein 99.95
KOG0766297 consensus Predicted mitochondrial carrier protein 99.95
KOG0755320 consensus Mitochondrial oxaloacetate carrier prote 99.95
KOG0770353 consensus Predicted mitochondrial carrier protein 99.93
KOG0769308 consensus Predicted mitochondrial carrier protein 99.92
KOG0767333 consensus Mitochondrial phosphate carrier protein 99.91
KOG2745321 consensus Mitochondrial carrier protein [General f 99.89
KOG1519297 consensus Predicted mitochondrial carrier protein 99.84
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.8
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 99.76
KOG1519297 consensus Predicted mitochondrial carrier protein 99.75
KOG2954427 consensus Mitochondrial carrier protein [General f 99.67
KOG2745321 consensus Mitochondrial carrier protein [General f 99.34
KOG2954427 consensus Mitochondrial carrier protein [General f 98.4
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
Probab=100.00  E-value=8.8e-51  Score=333.04  Aligned_cols=228  Identities=24%  Similarity=0.373  Sum_probs=198.9

Q ss_pred             CCChhHHHHHHHHHHHHHHHhhccHHHHHHHHhhccc---CCCCCchHHHHHHHHHhcCcccccccchhhhhhccchhHH
Q 024648           23 RLDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHS---GVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVL   99 (265)
Q Consensus        23 ~~~~~~~~~~g~~a~~~~~~~~~Pld~vk~r~q~~~~---~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~   99 (265)
                      .....+.+++|++||+++..++.|||++|+|+|++.+   ..++.++++.+++|+++||++|||||..++.++.+|+.++
T Consensus        24 ~~~~~~~llAGgvAGavsrt~~APLd~iKIlfQ~~~~~~~~~k~~g~~~~~~~I~~eEG~~g~wkGn~~~~~r~~pY~av  103 (320)
T KOG0752|consen   24 FITGAKSLLAGGVAGAVSRTVTAPLDRIKILFQVQVEPSKTSKYPGVIQAFKSIYREEGLRGFWKGNGPAQIRIIPYGAV  103 (320)
T ss_pred             hHHHHHHHhcchHHHHHHHHhcCchhHceEEEEeccccccccccccHHHHHHHHHHHhchhhhhcCcccceeeeeecchh
Confidence            3466788999999999999999999999999999984   4678899999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhccCCCCChhhhhhHHHHHHHHHHHHhhhhhcccHHHHHHHHHhhCCCCCcccCchHHHHHHHHhh
Q 024648          100 CLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGPIDVVCKVIKS  179 (265)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~Pld~ik~r~q~~~~~~~~~y~~~~~~~~~i~~~  179 (265)
                      +|.+||.+|+......+..     ..+...+++||.+||+++.+++||+|++|+|+.+|...  ..|+++.+++++|+++
T Consensus       104 qf~aye~~k~~~~~~~~~~-----~~~~~~~l~aGalAG~~a~~~tyPLDlvRtRLa~q~~~--~~y~~l~~a~~~I~~~  176 (320)
T KOG0752|consen  104 QFSAYEQYKKLVLGVDPNG-----SLSPLVRLVAGALAGMTATLATYPLDLLRTRLAVQGEL--KVYRGLLHAFKTIYRE  176 (320)
T ss_pred             hhhHHHHhhhhhhccCccc-----ccchhHHHHHHHHHHHHHHHhcCcHHHhhhheeeeccc--ccCCcHHHHHHHHHHh
Confidence            9999999998633322111     34567889999999999999999999999999998653  3799999999999999


Q ss_pred             cccccccccchhhHhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Q 024648          180 EGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKT  259 (265)
Q Consensus       180 ~G~~glyrG~~~~~l~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~t~Pldvvkt  259 (265)
                      ||++|||||+.+++++.+|+.++.|..||.+|++.....  .     .+........++||++||+++.+++||||+||+
T Consensus       177 eGi~gfYrGl~ptllgi~Pyag~~F~~Yd~lk~~~~~~~--~-----~~~~~~~~~~l~~GalAG~~aqti~yPlD~vRr  249 (320)
T KOG0752|consen  177 EGIRGFYRGLGPTLLGIAPYAGINFFAYDTLKKWQYLKS--S-----GNKELSNFERLLCGALAGAVAQTITYPLDTVRR  249 (320)
T ss_pred             cchhhhhcCcchhhheehhhhhhHHHHHHHHHHhhcccc--c-----ccchhhhHHHHHHHHHHHHHHhhhcccHHHHHH
Confidence            999999999999999999999999999999999621111  1     113334567899999999999999999999999


Q ss_pred             hhhcc
Q 024648          260 RLQVA  264 (265)
Q Consensus       260 r~q~~  264 (265)
                      |||+.
T Consensus       250 rmQ~~  254 (320)
T KOG0752|consen  250 RMQLG  254 (320)
T ss_pred             HHhcc
Confidence            99974



>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0752 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0753 consensus Mitochondrial fatty acid anion carrier protein/Uncoupling protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0764 consensus Mitochondrial FAD carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0768 consensus Mitochondrial carrier protein PET8 [Energy production and conversion] Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0757 consensus Mitochondrial carrier protein - Rim2p/Mrs12p [Energy production and conversion] Back     alignment and domain information
>KOG0760 consensus Mitochondrial carrier protein MRS3/4 [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0762 consensus Mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758 consensus Mitochondrial carnitine-acylcarnitine carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0759 consensus Mitochondrial oxoglutarate/malate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0754 consensus Mitochondrial oxodicarboxylate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion] Back     alignment and domain information
>KOG0761 consensus Mitochondrial carrier protein CGI-69 [Energy production and conversion] Back     alignment and domain information
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG0763 consensus Mitochondrial ornithine transporter [Energy production and conversion] Back     alignment and domain information
>KOG0749 consensus Mitochondrial ADP/ATP carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0756 consensus Mitochondrial tricarboxylate/dicarboxylate carrier proteins [Energy production and conversion] Back     alignment and domain information
>KOG0750 consensus Mitochondrial solute carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0765 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0766 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0755 consensus Mitochondrial oxaloacetate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0770 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0769 consensus Predicted mitochondrial carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG0767 consensus Mitochondrial phosphate carrier protein [Energy production and conversion] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG1519 consensus Predicted mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2745 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information
>KOG2954 consensus Mitochondrial carrier protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
1okc_A297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-06
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 58/232 (25%), Positives = 89/232 (38%), Gaps = 37/232 (15%) Query: 46 PTVVVKTRMQVAH-----SGVSQMRGL-SVFRNILRNDGIPGIFRGFGTSAVGSMPGRVL 99 P VK +QV H S Q +G+ I + G +RG + + P + L Sbjct: 27 PIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQAL 86 Query: 100 CLTSLEVSKDMMLKYTEGVD-MPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQ 158 + K + L GVD + R N +G + S + PLD RL Sbjct: 87 NFAFKDKYKQIFL---GGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAAD 143 Query: 159 GLPGTTY--CNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWR 216 G G + + K+ KS+G RGLY+GF ++ A ++G Y A+ M Sbjct: 144 VGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM--- 200 Query: 217 SLGYGDDMEKPSQSEMI-------TVQASAGMFAGACSTVITTPIDTVKTRL 261 + P +I TV A AG+ ++ P DTV+ R+ Sbjct: 201 -------LPDPKNVHIIVSWMIAQTVTAVAGL--------VSYPFDTVRRRM 237

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query265
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-31
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 3e-20
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 5e-05
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 3e-30
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 4e-20
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 7e-16
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 9e-07
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 7e-05
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score =  116 bits (292), Expect = 3e-31
 Identities = 50/226 (22%), Positives = 82/226 (36%), Gaps = 25/226 (11%)

Query: 49  VVKTRMQVAHSGVSQMRG------LSVFRNILRNDGIPGIFRGFGTSAVGSMPGRVLCLT 102
            VK  +QV H+             +     I +  G    +RG   + +   P + L   
Sbjct: 30  RVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQALNFA 89

Query: 103 SLEVSKDMMLKYTEGVDMPEATRVG--VANAVAGMLSNLVSCVYFVPLDVICQRLMVQGL 160
             +  K + L   +          G   +   AG  S  +  VY  PLD    RL     
Sbjct: 90  FKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATS--LCFVY--PLDFARTRLAADVG 145

Query: 161 PGTT--YCNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSL 218
            G       G  + + K+ KS+G RGLY+GF ++        A ++G Y  A+ M+    
Sbjct: 146 KGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGML---- 201

Query: 219 GYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQVA 264
               D +       I V         A + +++ P DTV+ R+ + 
Sbjct: 202 ---PDPKNVH----IIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQ 240


>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Length = 303 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 100.0
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 100.0
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=100.00  E-value=9.8e-48  Score=322.93  Aligned_cols=227  Identities=21%  Similarity=0.277  Sum_probs=195.3

Q ss_pred             ChhHHHHHHHHHHHHHHHhhccHHHHHHHHhhccc------CCCCCchHHHHHHHHHhcCcccccccchhhhhhccchhH
Q 024648           25 DKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHS------GVSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGRV   98 (265)
Q Consensus        25 ~~~~~~~~g~~a~~~~~~~~~Pld~vk~r~q~~~~------~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~   98 (265)
                      +..+.+++|+++++++.++++|+|+||+|+|++..      ...|++.++++++++++||++|||||+.+++++.++..+
T Consensus         6 ~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~   85 (297)
T 1okc_A            6 SFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQA   85 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHHH
Confidence            45678999999999999999999999999999864      235789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCChhhhhhHHHHHHHHHHHHhhhhhcccHHHHHHHHHhhCCC--CCcccCchHHHHHHH
Q 024648           99 LCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLP--GTTYCNGPIDVVCKV  176 (265)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~Pld~ik~r~q~~~~~--~~~~y~~~~~~~~~i  176 (265)
                      ++|.+||.+|+.+.......  ..........+++|.++++++.++++|+|+||+|+|.+...  ....|++++++++++
T Consensus        86 ~~f~~ye~~k~~~~~~~~~~--~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i  163 (297)
T 1okc_A           86 LNFAFKDKYKQIFLGGVDRH--KQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKI  163 (297)
T ss_dssp             HHHHHHHHHHHHHHTTCCTT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccccCcc--cchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHH
Confidence            99999999999654322111  11223456788999999999999999999999999998532  245789999999999


Q ss_pred             HhhcccccccccchhhHhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHhcCcHHH
Q 024648          177 IKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDT  256 (265)
Q Consensus       177 ~~~~G~~glyrG~~~~~l~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~t~Pldv  256 (265)
                      +++||++|||||+.+++++.+|+++++|.+||.+|+.+.+..           .......+++|++||++++++++|+||
T Consensus       164 ~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~-----------~~~~~~~~~~g~~ag~~a~~~t~P~dv  232 (297)
T 1okc_A          164 FKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----------NVHIIVSWMIAQTVTAVAGLVSYPFDT  232 (297)
T ss_dssp             HHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----------CSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC-----------CccHHHHHHHHHHHHHHHHHhcChHHH
Confidence            999999999999999999999999999999999999653321           112456689999999999999999999


Q ss_pred             HHHhhhcc
Q 024648          257 VKTRLQVA  264 (265)
Q Consensus       257 vktr~q~~  264 (265)
                      ||+|||++
T Consensus       233 vktr~q~~  240 (297)
T 1okc_A          233 VRRRMMMQ  240 (297)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhhc
Confidence            99999976



>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 265
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 3e-10
d1okca_292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 2e-09
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 57.0 bits (136), Expect = 3e-10
 Identities = 52/241 (21%), Positives = 90/241 (37%), Gaps = 21/241 (8%)

Query: 31  IIGAILFTAQSALLHPTVVVKTRMQVAH-----SGVSQMRG-LSVFRNILRNDGIPGIFR 84
           + G +        + P   VK  +QV H     S   Q +G +     I +  G    +R
Sbjct: 11  LAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWR 70

Query: 85  GFGTSAVGSMPGRVLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVY 144
           G   + +   P + L     +  K + L   +     +  R    N  +G  +   S  +
Sbjct: 71  GNLANVIRYFPTQALNFAFKDKYKQIFLGGVD--RHKQFWRYFAGNLASGGAAGATSLCF 128

Query: 145 FVPLDVICQRLMVQGLPGTTY--CNGPIDVVCKVIKSEGFRGLYRGFGLTALTQSPASAL 202
             PLD    RL      G       G  + + K+ KS+G RGLY+GF ++        A 
Sbjct: 129 VYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAA 188

Query: 203 WWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPIDTVKTRLQ 262
           ++G Y  A+ M+              ++  I V         A + +++ P DTV+ R+ 
Sbjct: 189 YFGVYDTAKGMLPD-----------PKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMM 237

Query: 263 V 263
           +
Sbjct: 238 M 238


>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query265
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 100.0
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=100.00  E-value=1.3e-43  Score=295.17  Aligned_cols=228  Identities=21%  Similarity=0.285  Sum_probs=199.7

Q ss_pred             CChhHHHHHHHHHHHHHHHhhccHHHHHHHHhhcccC------CCCCchHHHHHHHHHhcCcccccccchhhhhhccchh
Q 024648           24 LDKTRFHIIGAILFTAQSALLHPTVVVKTRMQVAHSG------VSQMRGLSVFRNILRNDGIPGIFRGFGTSAVGSMPGR   97 (265)
Q Consensus        24 ~~~~~~~~~g~~a~~~~~~~~~Pld~vk~r~q~~~~~------~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~   97 (265)
                      ....+.+++|++|++++.+++||||+||+|+|+++..      ..+++.++++++++++||+++||+|+.+.+++..+..
T Consensus         4 ~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~l~~~~~~~   83 (292)
T d1okca_           4 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ   83 (292)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhhhhhhhhccchhhhhhhccc
Confidence            3456889999999999999999999999999998653      4578999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCChhhhhhHHHHHHHHHHHHhhhhhcccHHHHHHHHHhhCCC--CCcccCchHHHHHH
Q 024648           98 VLCLTSLEVSKDMMLKYTEGVDMPEATRVGVANAVAGMLSNLVSCVYFVPLDVICQRLMVQGLP--GTTYCNGPIDVVCK  175 (265)
Q Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~v~~Pld~ik~r~q~~~~~--~~~~y~~~~~~~~~  175 (265)
                      .++|.+|+.+++.+.......+  +........+.+|.+|++++.++++|+|++|+|+|.+...  ....|.+..+++++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~P~~~ik~r~~~~~~~~~~~~~~~~~~~~~~~  161 (292)
T d1okca_          84 ALNFAFKDKYKQIFLGGVDRHK--QFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK  161 (292)
T ss_dssp             HHHHHHHHHHHHHHHTTCCTTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred             chhHHHHHHHHHHHhccccccc--ccchhhhhhhhhhhhhhhhHHhhhhhhhhhheeeeccccccccccccccHHHHHHH
Confidence            9999999999999877643322  2334456778899999999999999999999999998654  34578999999999


Q ss_pred             HHhhcccccccccchhhHhhhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCCCChhhHHHHHHHHHHHHHHHHHHhcCcHH
Q 024648          176 VIKSEGFRGLYRGFGLTALTQSPASALWWGAYGAAQHMIWRSLGYGDDMEKPSQSEMITVQASAGMFAGACSTVITTPID  255 (265)
Q Consensus       176 i~~~~G~~glyrG~~~~~l~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~t~Pld  255 (265)
                      ++++||+++||+|+.+++++.+++++++|..||.+|+.+.+..           .......++++++++++++++|||+|
T Consensus       162 ~~~~~G~~~l~~G~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-----------~~~~~~~~~~~~~~~~~a~~~t~P~d  230 (292)
T d1okca_         162 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK-----------NVHIIVSWMIAQTVTAVAGLVSYPFD  230 (292)
T ss_dssp             HHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG-----------CSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccchhhhhccccccccceehHhhhhhhhccchhhhccccc-----------ccchHHHHHHHHHHHHHHhhccccHH
Confidence            9999999999999999999999999999999999998653321           12245678999999999999999999


Q ss_pred             HHHHhhhcc
Q 024648          256 TVKTRLQVA  264 (265)
Q Consensus       256 vvktr~q~~  264 (265)
                      |||||||+|
T Consensus       231 vvktR~q~~  239 (292)
T d1okca_         231 TVRRRMMMQ  239 (292)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHhc
Confidence            999999986



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure